Query 014879
Match_columns 416
No_of_seqs 185 out of 791
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 19:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dh3_A Transcription factor CR 99.5 3.9E-14 1.3E-18 107.6 6.4 52 324-375 1-52 (55)
2 2wt7_A Proto-oncogene protein 99.3 9.3E-12 3.2E-16 96.2 9.5 58 323-380 1-58 (63)
3 1t2k_D Cyclic-AMP-dependent tr 99.3 1.6E-11 5.5E-16 94.0 9.2 56 324-379 1-56 (61)
4 1jnm_A Proto-oncogene C-JUN; B 99.2 7.2E-11 2.5E-15 90.8 7.6 55 324-378 1-55 (62)
5 2dgc_A Protein (GCN4); basic d 99.0 3.5E-10 1.2E-14 87.9 6.9 49 327-375 12-60 (63)
6 1gd2_E Transcription factor PA 99.0 1E-09 3.5E-14 87.3 7.3 65 322-386 6-70 (70)
7 1ci6_A Transcription factor AT 98.9 2E-09 6.8E-14 83.4 7.3 57 324-380 2-58 (63)
8 1gu4_A CAAT/enhancer binding p 98.5 8E-07 2.7E-11 72.0 9.9 60 320-379 11-70 (78)
9 1hjb_A Ccaat/enhancer binding 98.5 1.1E-06 3.6E-11 72.6 10.1 62 320-381 11-72 (87)
10 3a5t_A Transcription factor MA 98.3 1.7E-08 5.8E-13 86.2 -4.1 83 302-393 17-99 (107)
11 2wt7_B Transcription factor MA 98.3 4.5E-06 1.5E-10 69.5 9.5 82 302-392 7-88 (90)
12 2oqq_A Transcription factor HY 97.5 0.00019 6.6E-09 52.2 5.6 37 344-380 2-38 (42)
13 1skn_P DNA-binding domain of S 97.0 0.00016 5.3E-09 60.4 1.2 54 299-352 37-90 (92)
14 2jee_A YIIU; FTSZ, septum, coi 96.1 0.081 2.8E-06 43.3 11.3 49 345-393 6-54 (81)
15 3oja_B Anopheles plasmodium-re 95.6 0.14 4.7E-06 51.7 13.3 67 348-414 512-578 (597)
16 3oja_B Anopheles plasmodium-re 95.3 0.25 8.6E-06 49.8 14.2 67 348-414 505-571 (597)
17 3hnw_A Uncharacterized protein 95.1 0.16 5.4E-06 44.6 10.2 54 342-395 72-125 (138)
18 2w6a_A ARF GTPase-activating p 95.0 0.088 3E-06 41.1 7.4 39 348-386 23-61 (63)
19 3u1c_A Tropomyosin alpha-1 cha 94.4 1.8 6.1E-05 35.8 15.4 73 342-414 20-99 (101)
20 3a7p_A Autophagy protein 16; c 94.2 0.67 2.3E-05 41.8 12.3 59 346-406 90-148 (152)
21 3s4r_A Vimentin; alpha-helix, 94.1 0.71 2.4E-05 38.0 11.4 62 352-414 23-90 (93)
22 3o0z_A RHO-associated protein 94.1 1.8 6.2E-05 39.6 15.1 87 324-411 69-157 (168)
23 2dfs_A Myosin-5A; myosin-V, in 93.7 1.2 4.2E-05 50.0 16.0 53 341-393 987-1043(1080)
24 2jee_A YIIU; FTSZ, septum, coi 93.5 0.66 2.3E-05 37.9 10.0 47 346-392 21-67 (81)
25 3cvf_A Homer-3, homer protein 93.2 0.14 4.7E-06 41.7 5.5 50 347-396 8-57 (79)
26 3cve_A Homer protein homolog 1 93.2 0.78 2.7E-05 36.7 9.7 49 348-396 3-51 (72)
27 3s9g_A Protein hexim1; cyclin 93.1 0.4 1.4E-05 40.8 8.3 49 347-395 39-94 (104)
28 3efg_A Protein SLYX homolog; x 93.1 0.22 7.5E-06 40.0 6.5 51 345-395 14-64 (78)
29 2v71_A Nuclear distribution pr 92.9 1.1 3.7E-05 41.5 11.8 29 367-395 89-117 (189)
30 3cvf_A Homer-3, homer protein 92.6 0.48 1.6E-05 38.5 7.9 40 375-414 15-54 (79)
31 3u1c_A Tropomyosin alpha-1 cha 92.6 3.8 0.00013 33.9 14.7 59 335-393 34-99 (101)
32 2kz5_A Transcription factor NF 92.4 0.0067 2.3E-07 50.6 -3.3 48 299-346 41-88 (91)
33 2dfs_A Myosin-5A; myosin-V, in 91.8 0.98 3.3E-05 50.7 11.9 11 173-183 704-714 (1080)
34 3swy_A Cyclic nucleotide-gated 91.4 0.95 3.3E-05 33.5 7.6 44 349-395 2-45 (46)
35 3u59_A Tropomyosin beta chain; 91.4 5.2 0.00018 32.8 14.7 75 340-414 18-99 (101)
36 3hnw_A Uncharacterized protein 91.4 1.6 5.6E-05 38.2 10.5 54 341-394 78-131 (138)
37 4ath_A MITF, microphthalmia-as 91.0 0.8 2.7E-05 37.6 7.6 45 343-398 37-81 (83)
38 3u59_A Tropomyosin beta chain; 91.0 5.7 0.00019 32.6 15.4 37 336-372 35-71 (101)
39 3qh9_A Liprin-beta-2; coiled-c 90.9 2.4 8.2E-05 34.8 10.2 63 348-410 15-77 (81)
40 3cve_A Homer protein homolog 1 90.9 0.8 2.7E-05 36.7 7.3 43 372-414 6-48 (72)
41 3vkg_A Dynein heavy chain, cyt 90.6 2 6.7E-05 53.6 13.6 63 351-413 2027-2089(3245)
42 3a7p_A Autophagy protein 16; c 90.4 3 0.0001 37.6 11.4 66 348-413 78-144 (152)
43 2v66_B Nuclear distribution pr 90.4 1.3 4.6E-05 37.9 8.8 45 348-392 38-82 (111)
44 3o0z_A RHO-associated protein 90.3 5.4 0.00018 36.5 13.1 49 336-386 27-75 (168)
45 3swf_A CGMP-gated cation chann 90.3 0.91 3.1E-05 36.6 7.2 47 348-397 3-49 (74)
46 3mq9_A Bone marrow stromal ant 89.9 6.7 0.00023 38.6 14.6 67 345-414 397-470 (471)
47 3ol1_A Vimentin; structural ge 89.6 3.9 0.00013 34.7 11.0 25 369-393 72-96 (119)
48 1go4_E MAD1 (mitotic arrest de 89.4 1.6 5.5E-05 36.8 8.4 29 346-374 13-41 (100)
49 3tnu_B Keratin, type II cytosk 89.4 1.6 5.6E-05 37.2 8.6 27 347-373 38-64 (129)
50 3he5_A Synzip1; heterodimeric 89.1 1.5 5E-05 32.3 6.8 43 346-388 4-46 (49)
51 4ati_A MITF, microphthalmia-as 89.1 0.17 5.9E-06 43.2 2.3 25 374-398 92-116 (118)
52 1i84_S Smooth muscle myosin he 89.1 2.5 8.5E-05 47.5 12.1 39 348-386 860-898 (1184)
53 2oqq_A Transcription factor HY 89.1 1.3 4.3E-05 32.4 6.4 34 355-388 6-39 (42)
54 1deb_A APC protein, adenomatou 89.0 2.4 8.2E-05 32.2 8.1 45 347-391 5-49 (54)
55 1wle_A Seryl-tRNA synthetase; 88.1 4.6 0.00016 41.9 12.5 46 350-395 82-138 (501)
56 2ve7_C Kinetochore protein NUF 88.0 0.63 2.2E-05 44.2 5.6 39 315-353 111-149 (250)
57 1ci6_A Transcription factor AT 87.7 1.3 4.6E-05 33.9 6.3 30 366-395 23-52 (63)
58 3m48_A General control protein 87.6 0.6 2E-05 32.5 3.7 27 347-373 2-28 (33)
59 2oxj_A Hybrid alpha/beta pepti 87.4 0.72 2.4E-05 32.3 4.1 28 346-373 2-29 (34)
60 1gu4_A CAAT/enhancer binding p 87.3 5 0.00017 32.2 9.7 26 367-392 37-62 (78)
61 1go4_E MAD1 (mitotic arrest de 87.3 1.1 3.6E-05 38.0 5.9 32 360-391 13-44 (100)
62 2wt7_B Transcription factor MA 87.2 1.2 4E-05 37.0 6.0 30 363-392 52-81 (90)
63 3m9b_A Proteasome-associated A 86.8 0.71 2.4E-05 44.5 5.2 39 347-385 56-94 (251)
64 1nkp_B MAX protein, MYC proto- 86.8 0.82 2.8E-05 36.1 4.7 23 344-366 46-68 (83)
65 1ik9_A DNA repair protein XRCC 86.5 6.3 0.00022 36.7 11.3 64 348-412 135-204 (213)
66 3tnu_A Keratin, type I cytoske 86.5 2.3 7.7E-05 36.4 7.7 26 348-373 48-73 (131)
67 4etp_A Kinesin-like protein KA 86.5 1.9 6.7E-05 43.2 8.4 53 355-414 6-58 (403)
68 3ghg_A Fibrinogen alpha chain; 86.4 2.6 9E-05 44.5 9.5 44 338-381 103-146 (562)
69 1kd8_B GABH BLL, GCN4 acid bas 86.2 1.2 4.2E-05 31.5 4.8 29 346-374 2-30 (36)
70 3ghg_A Fibrinogen alpha chain; 86.0 2.1 7.2E-05 45.2 8.5 61 328-392 75-136 (562)
71 3mq7_A Bone marrow stromal ant 85.7 3.8 0.00013 35.7 8.6 36 354-389 73-108 (121)
72 3tnu_B Keratin, type II cytosk 85.7 13 0.00044 31.5 12.0 29 347-375 45-73 (129)
73 3i00_A HIP-I, huntingtin-inter 85.2 13 0.00046 31.9 11.9 48 338-385 33-80 (120)
74 3oja_A Leucine-rich immune mol 85.1 15 0.00053 36.2 14.0 30 364-393 433-462 (487)
75 3c3f_A Alpha/beta peptide with 85.1 1.1 3.8E-05 31.3 4.1 28 346-373 2-29 (34)
76 1kd8_A GABH AIV, GCN4 acid bas 85.0 1.1 3.6E-05 31.8 4.0 29 346-374 2-30 (36)
77 1nlw_A MAD protein, MAX dimeri 84.8 1.6 5.6E-05 34.8 5.6 33 343-375 45-77 (80)
78 1ic2_A Tropomyosin alpha chain 84.7 13 0.00044 29.3 11.2 45 345-389 20-64 (81)
79 3q8t_A Beclin-1; autophagy, AT 84.7 15 0.0005 30.2 11.5 41 345-385 25-65 (96)
80 3mq9_A Bone marrow stromal ant 84.4 8.8 0.0003 37.8 11.9 26 367-392 437-462 (471)
81 2dq0_A Seryl-tRNA synthetase; 84.4 6.2 0.00021 40.2 11.0 46 350-395 43-91 (455)
82 1t2k_D Cyclic-AMP-dependent tr 84.3 2.9 0.0001 31.4 6.6 28 367-394 23-50 (61)
83 3u06_A Protein claret segregat 84.3 3 0.0001 42.1 8.6 53 355-414 6-58 (412)
84 3vmx_A Voltage-gated hydrogen 84.3 4.1 0.00014 30.5 7.1 37 351-387 3-39 (48)
85 3c3g_A Alpha/beta peptide with 84.1 1.8 6E-05 30.2 4.7 27 347-373 2-28 (33)
86 2yy0_A C-MYC-binding protein; 84.0 2 6.7E-05 32.3 5.3 27 364-390 24-50 (53)
87 3tnu_A Keratin, type I cytoske 83.9 10 0.00034 32.4 10.5 30 347-376 40-69 (131)
88 2efr_A General control protein 83.6 24 0.00083 31.6 15.8 16 401-416 140-155 (155)
89 4emc_A Monopolin complex subun 83.0 4.3 0.00015 37.8 8.3 47 344-390 12-58 (190)
90 1wle_A Seryl-tRNA synthetase; 82.6 24 0.00083 36.6 14.7 69 345-413 70-149 (501)
91 1f5n_A Interferon-induced guan 82.6 18 0.0006 38.2 13.8 73 338-415 505-581 (592)
92 3a7o_A Autophagy protein 16; c 82.5 4.8 0.00017 32.4 7.3 42 353-394 33-74 (75)
93 2oto_A M protein; helical coil 82.5 19 0.00066 31.3 12.0 31 348-378 53-83 (155)
94 2bni_A General control protein 82.4 1.6 5.3E-05 30.6 3.9 28 346-373 2-29 (34)
95 2wq1_A General control protein 82.3 2.3 7.8E-05 29.6 4.7 27 347-373 2-28 (33)
96 2hy6_A General control protein 82.3 1.6 5.4E-05 30.6 3.9 28 346-373 2-29 (34)
97 2v71_A Nuclear distribution pr 82.2 31 0.0011 31.9 14.6 68 347-414 90-167 (189)
98 2v4h_A NF-kappa-B essential mo 82.1 24 0.00081 30.4 12.1 45 334-378 34-81 (110)
99 2v66_B Nuclear distribution pr 82.1 23 0.00079 30.3 14.8 30 366-395 35-64 (111)
100 1a93_B MAX protein, coiled coi 82.0 1.9 6.5E-05 30.2 4.2 30 364-393 5-34 (34)
101 3swk_A Vimentin; cytoskeleton, 81.8 13 0.00046 29.9 9.9 69 347-416 2-85 (86)
102 3bas_A Myosin heavy chain, str 81.8 19 0.00065 29.0 12.7 50 345-394 35-84 (89)
103 3m9b_A Proteasome-associated A 81.8 1.6 5.5E-05 42.1 5.2 42 351-392 53-94 (251)
104 1ses_A Seryl-tRNA synthetase; 81.4 22 0.00074 35.8 13.5 51 345-395 28-86 (421)
105 1hjb_A Ccaat/enhancer binding 81.3 13 0.00045 30.4 9.8 27 369-395 39-65 (87)
106 1nkp_A C-MYC, MYC proto-oncoge 81.3 3.8 0.00013 33.1 6.6 18 344-361 51-68 (88)
107 1t6f_A Geminin; coiled-coil, c 80.8 2.5 8.4E-05 30.0 4.5 29 358-386 6-34 (37)
108 2c9l_Y EB1, zebra, BZLF1 trans 80.6 8.8 0.0003 29.7 7.9 35 330-364 7-41 (63)
109 2w83_C C-JUN-amino-terminal ki 80.6 15 0.00051 29.8 9.6 64 349-412 6-76 (77)
110 1uo4_A General control protein 80.5 2 6.8E-05 30.1 3.9 27 346-372 2-28 (34)
111 4emc_A Monopolin complex subun 80.4 9.4 0.00032 35.5 9.6 51 346-396 7-57 (190)
112 3a2a_A Voltage-gated hydrogen 80.2 4.5 0.00015 31.2 6.1 36 351-386 10-45 (58)
113 2wt7_A Proto-oncogene protein 79.6 18 0.00061 27.4 9.5 30 366-395 23-52 (63)
114 1gd2_E Transcription factor PA 79.6 4.1 0.00014 32.2 6.0 31 363-393 33-63 (70)
115 1fmh_A General control protein 79.5 3.1 0.00011 28.5 4.5 29 347-375 3-31 (33)
116 3s9g_A Protein hexim1; cyclin 79.4 10 0.00035 32.2 8.7 51 358-409 36-87 (104)
117 2v4h_A NF-kappa-B essential mo 79.4 26 0.00088 30.1 11.2 40 354-393 64-103 (110)
118 3i00_A HIP-I, huntingtin-inter 78.6 8.8 0.0003 33.0 8.3 40 353-392 41-80 (120)
119 2dq0_A Seryl-tRNA synthetase; 78.1 26 0.00087 35.7 12.9 70 345-414 31-103 (455)
120 1jnm_A Proto-oncogene C-JUN; B 78.0 2.5 8.6E-05 31.9 4.2 28 367-394 23-50 (62)
121 2ocy_A RAB guanine nucleotide 77.6 40 0.0014 30.3 14.7 64 351-416 78-144 (154)
122 2xdj_A Uncharacterized protein 77.4 17 0.00057 29.5 9.1 45 345-389 20-64 (83)
123 1jcd_A Major outer membrane li 77.4 12 0.00043 28.1 7.8 37 347-383 6-42 (52)
124 3oja_A Leucine-rich immune mol 77.3 20 0.00067 35.5 11.6 33 359-391 435-467 (487)
125 2yy0_A C-MYC-binding protein; 77.2 4.6 0.00016 30.3 5.3 29 353-381 20-48 (53)
126 2eqb_B RAB guanine nucleotide 76.9 32 0.0011 28.9 11.0 46 347-392 14-59 (97)
127 2lw1_A ABC transporter ATP-bin 76.8 17 0.00059 28.9 9.1 52 345-396 22-79 (89)
128 3qne_A Seryl-tRNA synthetase, 76.2 9.1 0.00031 39.7 9.1 47 350-396 45-94 (485)
129 3qne_A Seryl-tRNA synthetase, 76.0 18 0.0006 37.6 11.2 70 344-413 32-104 (485)
130 2zxx_A Geminin; coiled-coil, c 75.7 6.8 0.00023 31.9 6.3 33 358-390 33-65 (79)
131 3m0d_C TNF receptor-associated 75.5 23 0.00078 27.1 9.1 59 343-415 4-62 (65)
132 2wvr_A Geminin; DNA replicatio 75.0 17 0.00059 34.2 9.7 52 358-412 114-165 (209)
133 1ik9_A DNA repair protein XRCC 74.8 22 0.00075 33.1 10.5 37 343-379 137-173 (213)
134 3m91_A Proteasome-associated A 74.2 13 0.00044 27.9 7.1 7 407-413 43-49 (51)
135 1deq_A Fibrinogen (alpha chain 74.0 15 0.00051 37.5 9.7 66 324-389 91-157 (390)
136 4h22_A Leucine-rich repeat fli 74.0 7.5 0.00026 33.1 6.4 74 321-397 7-82 (103)
137 3jsv_C NF-kappa-B essential mo 74.0 30 0.001 29.0 9.9 64 330-393 8-74 (94)
138 2b9c_A Striated-muscle alpha t 73.9 38 0.0013 29.8 11.3 74 322-395 35-123 (147)
139 1am9_A Srebp-1A, protein (ster 73.9 6.2 0.00021 31.3 5.7 22 370-391 54-75 (82)
140 3k29_A Putative uncharacterize 73.8 54 0.0019 30.0 15.9 89 304-394 19-127 (169)
141 1wlq_A Geminin; coiled-coil; 2 72.5 25 0.00086 28.9 9.0 31 357-387 36-66 (83)
142 2ocy_A RAB guanine nucleotide 71.9 39 0.0013 30.4 10.9 48 346-393 45-92 (154)
143 3htk_A Structural maintenance 71.6 22 0.00077 26.0 7.9 47 342-388 9-55 (60)
144 2oto_A M protein; helical coil 71.6 47 0.0016 28.8 11.3 6 380-385 71-76 (155)
145 2efr_A General control protein 71.2 56 0.0019 29.3 11.8 63 329-391 54-116 (155)
146 2r2v_A GCN4 leucine zipper; co 70.8 5.6 0.00019 27.9 4.1 28 346-373 2-29 (34)
147 2xdj_A Uncharacterized protein 70.8 40 0.0014 27.2 10.3 33 361-393 22-54 (83)
148 1c94_A Retro-GCN4 leucine zipp 70.8 4.6 0.00016 28.3 3.7 30 387-416 9-38 (38)
149 3q0x_A Centriole protein; cent 70.5 20 0.0007 33.9 9.3 58 322-385 161-218 (228)
150 1nkp_B MAX protein, MYC proto- 70.2 7.8 0.00027 30.4 5.4 28 364-391 52-79 (83)
151 3efg_A Protein SLYX homolog; x 69.7 16 0.00056 29.1 7.2 48 348-395 10-57 (78)
152 4etp_A Kinesin-like protein KA 69.7 16 0.00053 36.7 8.8 48 345-392 10-57 (403)
153 1m1j_B Fibrinogen beta chain; 69.5 26 0.00089 36.3 10.5 9 125-133 37-45 (464)
154 1s1c_X RHO-associated, coiled- 68.8 32 0.0011 27.4 8.6 33 349-381 3-35 (71)
155 1nkp_A C-MYC, MYC proto-oncoge 68.7 14 0.00047 29.8 6.7 29 364-392 57-85 (88)
156 1am9_A Srebp-1A, protein (ster 68.5 21 0.00072 28.2 7.6 21 334-354 12-32 (82)
157 1uix_A RHO-associated kinase; 68.4 31 0.001 27.6 8.5 35 350-384 2-36 (71)
158 2dgc_A Protein (GCN4); basic d 68.4 6.8 0.00023 30.1 4.6 29 367-395 31-59 (63)
159 1uii_A Geminin; human, DNA rep 68.2 16 0.00054 30.1 6.9 31 357-387 44-74 (83)
160 3s84_A Apolipoprotein A-IV; fo 67.5 57 0.0019 31.1 11.8 80 333-415 164-245 (273)
161 3e98_A GAF domain of unknown f 67.3 23 0.00079 33.3 8.9 45 347-395 67-111 (252)
162 2eqb_B RAB guanine nucleotide 67.1 23 0.00078 29.8 7.8 44 346-389 20-63 (97)
163 3bas_A Myosin heavy chain, str 66.9 48 0.0016 26.6 12.3 44 345-388 14-57 (89)
164 3vkg_A Dynein heavy chain, cyt 66.9 69 0.0024 40.5 15.0 28 367-394 2015-2042(3245)
165 1zme_C Proline utilization tra 66.7 4.9 0.00017 29.7 3.4 25 344-368 43-67 (70)
166 4b4t_K 26S protease regulatory 66.5 9.9 0.00034 38.5 6.7 37 356-392 39-75 (428)
167 3nmd_A CGMP dependent protein 66.5 23 0.00079 28.3 7.4 22 347-368 42-63 (72)
168 3bbp_D GRIP and coiled-coil do 66.3 5 0.00017 32.1 3.5 47 348-394 18-64 (71)
169 2lz1_A Nuclear factor erythroi 66.2 0.062 2.1E-06 44.8 -7.7 46 300-345 42-87 (90)
170 3lss_A Seryl-tRNA synthetase; 66.1 26 0.0009 36.3 9.8 17 379-395 109-126 (484)
171 1dh3_A Transcription factor CR 66.0 8.7 0.0003 28.7 4.7 28 367-394 23-50 (55)
172 3nmd_A CGMP dependent protein 65.9 29 0.00098 27.8 7.8 25 389-413 42-66 (72)
173 1dip_A Delta-sleep-inducing pe 65.3 6.4 0.00022 32.0 4.0 25 362-386 18-42 (78)
174 1joc_A EEA1, early endosomal a 64.8 36 0.0012 28.8 8.9 39 347-385 13-51 (125)
175 2wuj_A Septum site-determining 64.7 6.4 0.00022 29.5 3.7 26 346-371 28-53 (57)
176 1nlw_A MAD protein, MAX dimeri 64.5 13 0.00046 29.5 5.8 27 364-390 52-78 (80)
177 2oa5_A Hypothetical protein BQ 64.3 3.6 0.00012 35.4 2.5 24 346-369 9-32 (110)
178 1g6u_A Domain swapped dimer; d 64.2 27 0.00092 25.5 6.7 26 367-392 21-46 (48)
179 2dq3_A Seryl-tRNA synthetase; 63.7 23 0.00078 35.7 8.6 44 352-395 44-90 (425)
180 1deq_A Fibrinogen (alpha chain 63.2 1.2E+02 0.0041 31.0 13.6 12 403-414 143-154 (390)
181 3trt_A Vimentin; cytoskeleton, 62.9 49 0.0017 25.3 9.4 14 379-392 55-68 (77)
182 4b4t_M 26S protease regulatory 62.5 7.3 0.00025 39.6 4.8 9 407-415 66-74 (434)
183 1dip_A Delta-sleep-inducing pe 62.4 6.1 0.00021 32.1 3.4 23 344-366 21-43 (78)
184 1wt6_A Myotonin-protein kinase 62.1 64 0.0022 26.4 10.5 57 332-391 14-70 (81)
185 1m1j_B Fibrinogen beta chain; 62.0 1.5E+02 0.0052 30.7 14.5 12 383-394 178-189 (464)
186 3m0d_C TNF receptor-associated 61.8 51 0.0017 25.1 9.5 28 347-374 15-42 (65)
187 4h22_A Leucine-rich repeat fli 61.7 74 0.0025 27.0 12.0 43 347-389 39-81 (103)
188 1gmj_A ATPase inhibitor; coile 61.5 67 0.0023 26.4 9.5 17 377-393 62-78 (84)
189 1ic2_A Tropomyosin alpha chain 61.5 57 0.0019 25.6 11.9 50 347-396 8-57 (81)
190 3mov_A Lamin-B1; LMNB1, B-type 61.1 17 0.00058 30.0 6.0 13 374-386 45-57 (95)
191 3s4r_A Vimentin; alpha-helix, 61.0 36 0.0012 27.7 7.9 26 366-391 56-81 (93)
192 4e61_A Protein BIM1; EB1-like 60.9 46 0.0016 28.3 8.7 36 350-385 9-44 (106)
193 3m0a_A TNF receptor-associated 60.0 52 0.0018 24.6 8.9 48 347-394 7-54 (66)
194 1m1j_A Fibrinogen alpha subuni 59.5 77 0.0026 33.2 11.7 62 324-385 89-151 (491)
195 2w83_C C-JUN-amino-terminal ki 59.0 16 0.00055 29.7 5.3 37 349-385 34-70 (77)
196 3u06_A Protein claret segregat 59.0 29 0.001 35.0 8.5 45 348-392 13-57 (412)
197 1lwu_C Fibrinogen gamma chain; 58.9 20 0.0007 35.3 7.2 23 349-371 16-38 (323)
198 3he5_B Synzip2; heterodimeric 58.8 24 0.00081 26.2 5.7 17 362-378 6-22 (52)
199 2dnx_A Syntaxin-12; snare, HAB 58.8 23 0.00078 30.2 6.6 31 362-392 47-77 (130)
200 3uux_B Mitochondrial division 58.8 23 0.00079 34.0 7.2 50 345-394 177-226 (242)
201 3q0x_A Centriole protein; cent 58.6 40 0.0014 32.0 8.8 53 357-410 169-222 (228)
202 2wuj_A Septum site-determining 57.8 8.7 0.0003 28.8 3.4 26 370-395 31-56 (57)
203 3gp4_A Transcriptional regulat 57.1 91 0.0031 26.6 11.5 32 300-332 40-71 (142)
204 2p22_C Protein SRN2; endosome, 57.0 1.2E+02 0.004 27.8 11.7 74 300-378 37-112 (192)
205 1lwu_C Fibrinogen gamma chain; 56.6 36 0.0012 33.6 8.5 40 354-393 7-46 (323)
206 3htk_A Structural maintenance 56.5 55 0.0019 23.8 9.3 48 347-394 7-54 (60)
207 3m0a_A TNF receptor-associated 56.3 60 0.0021 24.2 9.2 51 365-415 11-61 (66)
208 1p9i_A Cortexillin I/GCN4 hybr 55.7 15 0.00053 24.7 3.9 15 377-391 10-24 (31)
209 3vmx_A Voltage-gated hydrogen 55.4 23 0.00077 26.5 5.1 22 373-394 4-25 (48)
210 2er8_A Regulatory protein Leu3 55.2 6.3 0.00022 29.4 2.3 22 344-365 48-69 (72)
211 3he5_B Synzip2; heterodimeric 55.1 39 0.0013 25.0 6.3 6 356-361 14-19 (52)
212 2zqm_A Prefoldin beta subunit 54.5 44 0.0015 26.8 7.4 19 339-357 28-46 (117)
213 4b4t_K 26S protease regulatory 54.2 21 0.00071 36.1 6.5 41 348-388 45-85 (428)
214 2xu6_A MDV1 coiled coil; prote 53.2 29 0.00098 27.9 5.8 48 346-393 22-69 (72)
215 2ve7_A Kinetochore protein HEC 53.2 18 0.00062 35.1 5.7 32 351-382 184-215 (315)
216 1hlo_A Protein (transcription 53.0 12 0.00041 29.3 3.6 10 345-354 29-38 (80)
217 1fxk_C Protein (prefoldin); ar 53.0 45 0.0015 27.7 7.4 24 349-372 99-122 (133)
218 3ghg_C Fibrinogen gamma chain; 52.8 1.4E+02 0.0048 30.5 12.2 15 400-414 118-132 (411)
219 4dzn_A Coiled-coil peptide CC- 52.7 28 0.00097 23.7 4.8 26 369-394 5-30 (33)
220 2xv5_A Lamin-A/C; structural p 52.7 78 0.0027 25.0 8.3 43 340-382 7-49 (74)
221 2i1j_A Moesin; FERM, coiled-co 52.3 10 0.00035 39.7 4.0 16 348-363 338-353 (575)
222 3tq2_A KE1; parallel three hel 52.2 36 0.0012 23.6 5.3 31 362-392 4-34 (36)
223 4fm3_A Uncharacterized hypothe 51.8 96 0.0033 26.0 9.1 24 299-323 25-48 (98)
224 2xnx_M M protein, M1-BC1; cell 51.8 1.3E+02 0.0046 26.9 11.3 42 369-410 83-124 (146)
225 3a2a_A Voltage-gated hydrogen 51.5 18 0.00063 27.8 4.2 21 375-395 13-33 (58)
226 3oa7_A Head morphogenesis prot 51.4 49 0.0017 31.1 7.9 42 354-395 32-73 (206)
227 1jcd_A Major outer membrane li 50.3 61 0.0021 24.3 6.9 29 352-380 4-32 (52)
228 1gk6_A Vimentin; intermediate 50.2 44 0.0015 25.1 6.2 44 348-391 3-46 (59)
229 2zvf_A Alanyl-tRNA synthetase; 50.2 38 0.0013 29.0 6.7 26 363-388 29-54 (171)
230 1l8d_A DNA double-strand break 48.9 1E+02 0.0035 24.7 10.7 11 347-357 33-43 (112)
231 1ytz_T Troponin T; muscle, THI 48.4 1.2E+02 0.0042 25.5 11.0 42 334-375 17-65 (107)
232 3lss_A Seryl-tRNA synthetase; 48.3 1.1E+02 0.0039 31.6 11.0 8 404-411 128-135 (484)
233 1joc_A EEA1, early endosomal a 47.8 99 0.0034 26.1 8.8 28 358-385 17-44 (125)
234 2fic_A Bridging integrator 1; 47.7 1.6E+02 0.0054 26.5 12.5 11 382-392 199-209 (251)
235 3swk_A Vimentin; cytoskeleton, 47.4 81 0.0028 25.3 7.8 53 345-399 21-73 (86)
236 2no2_A HIP-I, huntingtin-inter 47.3 83 0.0028 26.3 8.1 24 335-358 19-42 (107)
237 1fxk_C Protein (prefoldin); ar 46.5 84 0.0029 26.0 8.1 38 348-385 91-128 (133)
238 2l5g_B Putative uncharacterize 45.9 57 0.002 23.8 5.9 33 363-395 6-38 (42)
239 4e61_A Protein BIM1; EB1-like 44.9 1.2E+02 0.0043 25.7 8.8 17 357-373 23-39 (106)
240 3t98_B Nucleoporin NUP58/NUP45 44.9 1.2E+02 0.004 25.0 8.5 52 344-395 25-80 (93)
241 2e7s_A RAB guanine nucleotide 44.9 72 0.0025 28.2 7.6 33 384-416 100-132 (135)
242 3mq7_A Bone marrow stromal ant 44.7 1.6E+02 0.0054 25.7 12.4 22 372-393 70-91 (121)
243 1ses_A Seryl-tRNA synthetase; 44.4 2.2E+02 0.0075 28.5 12.1 13 379-391 77-89 (421)
244 1fxk_A Prefoldin; archaeal pro 43.9 57 0.0019 25.8 6.4 19 339-357 23-41 (107)
245 3w03_C DNA repair protein XRCC 43.9 47 0.0016 30.6 6.6 11 97-107 11-21 (184)
246 3plt_A Sphingolipid long chain 43.5 1.7E+02 0.0059 27.8 10.5 59 329-392 98-157 (234)
247 3e98_A GAF domain of unknown f 43.4 54 0.0018 30.8 7.1 55 348-406 75-129 (252)
248 3ra3_A P1C; coiled coil domain 43.3 37 0.0013 22.4 4.1 21 356-376 4-24 (28)
249 3he4_A Synzip6; heterodimeric 43.2 33 0.0011 25.7 4.4 34 347-380 19-52 (56)
250 2xv5_A Lamin-A/C; structural p 43.0 1.1E+02 0.0038 24.1 7.8 44 347-390 7-50 (74)
251 1qvr_A CLPB protein; coiled co 42.6 53 0.0018 35.2 7.7 40 323-364 378-420 (854)
252 3mtu_A Tropomyosin alpha-1 cha 42.5 1.1E+02 0.0038 24.0 7.7 28 348-375 5-32 (75)
253 4fla_A Regulation of nuclear P 42.2 1.8E+02 0.0062 25.6 11.8 6 332-337 66-71 (152)
254 3c9i_A Tail needle protein GP2 42.1 2.3E+02 0.008 26.9 11.0 50 347-396 86-135 (242)
255 2odv_A Plectin 1, HD1; plakin 42.1 1.2E+02 0.0042 28.2 9.2 32 324-355 103-134 (235)
256 3cl3_D NF-kappa-B essential mo 41.6 36 0.0012 30.0 5.1 18 346-363 31-48 (130)
257 1deb_A APC protein, adenomatou 41.5 1.1E+02 0.0039 23.1 7.8 32 363-394 7-38 (54)
258 1cii_A Colicin IA; bacteriocin 41.2 2.5E+02 0.0086 29.8 12.0 52 342-393 360-411 (602)
259 1fmh_A General control protein 41.2 41 0.0014 22.9 4.2 26 368-393 3-28 (33)
260 2oa5_A Hypothetical protein BQ 41.1 14 0.0005 31.7 2.5 24 368-391 10-33 (110)
261 3lay_A Zinc resistance-associa 40.5 36 0.0012 30.8 5.2 18 251-268 4-21 (175)
262 1fmh_B General control protein 40.3 37 0.0013 23.2 3.9 24 370-393 5-28 (33)
263 1x8y_A Lamin A/C; structural p 40.2 1.4E+02 0.0048 23.8 9.6 44 346-389 29-72 (86)
264 3w03_C DNA repair protein XRCC 40.0 55 0.0019 30.1 6.4 8 321-328 137-144 (184)
265 2dq3_A Seryl-tRNA synthetase; 40.0 56 0.0019 32.8 7.0 69 345-413 30-101 (425)
266 1s1c_X RHO-associated, coiled- 39.9 83 0.0028 25.1 6.5 22 364-385 4-25 (71)
267 3iox_A AGI/II, PA; alpha helix 39.7 3E+02 0.01 29.0 12.4 29 349-377 31-59 (497)
268 3t98_B Nucleoporin NUP58/NUP45 39.6 1.2E+02 0.004 25.0 7.7 63 351-414 11-78 (93)
269 2jmh_A BLO T 5, mite allergen 39.6 1.2E+02 0.004 26.4 7.9 59 348-412 22-81 (119)
270 2fxo_A Myosin heavy chain, car 39.5 1.7E+02 0.0059 24.6 15.3 34 352-385 69-102 (129)
271 1p9i_A Cortexillin I/GCN4 hybr 39.5 29 0.00098 23.4 3.2 26 348-373 2-27 (31)
272 1a93_B MAX protein, coiled coi 39.4 43 0.0015 23.4 4.2 19 355-373 10-28 (34)
273 1d7m_A Cortexillin I; coiled-c 39.4 1.7E+02 0.0058 24.6 13.7 62 334-395 14-82 (101)
274 2lw1_A ABC transporter ATP-bin 39.3 1.2E+02 0.004 24.1 7.5 48 346-393 30-83 (89)
275 3rkg_A Magnesium transporter M 39.2 1.3E+02 0.0044 28.8 9.0 25 384-408 171-196 (261)
276 2oxj_A Hybrid alpha/beta pepti 39.1 41 0.0014 23.5 4.1 21 370-390 5-25 (34)
277 1m1j_A Fibrinogen alpha subuni 39.1 3.4E+02 0.012 28.4 12.6 14 401-414 139-152 (491)
278 2xnx_M M protein, M1-BC1; cell 39.0 87 0.003 28.1 7.2 25 369-393 69-93 (146)
279 1zxa_A CGMP-dependent protein 38.7 44 0.0015 26.3 4.8 32 342-373 22-53 (67)
280 3iv1_A Tumor susceptibility ge 38.4 1.6E+02 0.0054 23.8 10.8 47 347-393 27-73 (78)
281 1gk4_A Vimentin; intermediate 38.3 1.5E+02 0.005 23.4 9.9 36 347-382 28-63 (84)
282 1h7c_A Tubulin-specific chaper 38.2 1.2E+02 0.004 25.4 7.6 44 351-394 34-80 (108)
283 4gkw_A Spindle assembly abnorm 38.1 2.2E+02 0.0076 25.5 11.0 71 344-414 45-125 (167)
284 3viq_B Mating-type switching p 38.1 1.5E+02 0.005 24.3 7.9 14 374-387 42-55 (85)
285 3ljm_A Coil Ser L9C; de novo d 37.7 54 0.0018 22.1 4.3 7 350-356 6-12 (31)
286 3gpv_A Transcriptional regulat 37.7 1.6E+02 0.0056 25.0 8.7 32 300-332 54-85 (148)
287 1lrz_A FEMA, factor essential 37.6 1E+02 0.0034 30.3 8.3 24 345-368 247-270 (426)
288 2ve7_C Kinetochore protein NUF 37.4 20 0.0007 33.8 3.2 63 330-392 133-195 (250)
289 3mq1_A Mite allergen DER P 5; 37.3 1E+02 0.0035 26.2 7.0 59 348-412 7-66 (103)
290 1d7m_A Cortexillin I; coiled-c 37.3 1.9E+02 0.0063 24.3 11.7 50 335-384 8-57 (101)
291 2j69_A Bacterial dynamin-like 37.2 1.9E+02 0.0065 30.5 10.8 64 348-413 348-411 (695)
292 3a5t_A Transcription factor MA 37.1 4.1 0.00014 34.7 -1.5 33 360-392 59-91 (107)
293 3mxz_A Tubulin-specific chaper 37.0 1.8E+02 0.0061 24.7 8.7 44 351-394 35-81 (116)
294 3gp4_A Transcriptional regulat 36.8 1.5E+02 0.0051 25.2 8.3 61 298-374 57-117 (142)
295 3aco_A Pacsin2, protein kinase 36.7 2.3E+02 0.0078 26.8 10.4 27 368-394 219-245 (350)
296 3vp9_A General transcriptional 36.2 1.9E+02 0.0064 24.0 8.5 28 348-375 39-66 (92)
297 4dzn_A Coiled-coil peptide CC- 35.7 75 0.0026 21.7 4.8 11 375-385 18-28 (33)
298 1qsd_A Protein (beta-tubulin b 35.3 2E+02 0.0067 24.0 8.7 63 325-394 12-78 (106)
299 2l5g_A GPS2 protein, G protein 35.0 40 0.0014 24.1 3.5 20 345-364 15-34 (38)
300 4ani_A Protein GRPE; chaperone 34.9 1.4E+02 0.0049 27.8 8.4 27 348-374 62-88 (213)
301 3hrn_A Transient receptor pote 34.9 1.6E+02 0.0056 23.1 8.2 40 359-398 6-45 (64)
302 1fzc_C Fibrin; blood coagulati 34.6 20 0.00067 35.4 2.7 34 346-379 5-38 (319)
303 1wt6_A Myotonin-protein kinase 34.4 1.9E+02 0.0065 23.6 9.9 8 348-355 17-24 (81)
304 3trt_A Vimentin; cytoskeleton, 34.4 1.5E+02 0.0052 22.5 8.6 52 331-385 24-75 (77)
305 2aze_A Transcription factor DP 34.3 1.2E+02 0.0039 27.4 7.4 20 340-359 21-40 (155)
306 3bbp_D GRIP and coiled-coil do 34.2 32 0.0011 27.5 3.3 14 401-414 50-63 (71)
307 2zdi_C Prefoldin subunit alpha 34.1 63 0.0022 27.7 5.5 22 349-370 109-130 (151)
308 1uur_A Stata protein, STAT pro 33.8 4.3E+02 0.015 27.5 12.9 59 356-415 56-118 (473)
309 2no2_A HIP-I, huntingtin-inter 33.5 2.1E+02 0.0072 23.9 13.5 25 368-392 70-94 (107)
310 2p0t_A UPF0307 protein pspto_4 33.5 61 0.0021 29.6 5.5 21 333-353 61-81 (176)
311 3lay_A Zinc resistance-associa 33.5 1.2E+02 0.004 27.5 7.4 13 377-389 117-129 (175)
312 4ath_A MITF, microphthalmia-as 33.4 88 0.003 25.5 5.9 32 344-375 48-79 (83)
313 2zvf_A Alanyl-tRNA synthetase; 33.2 40 0.0014 28.8 4.1 26 349-374 29-54 (171)
314 1uii_A Geminin; human, DNA rep 32.8 1.1E+02 0.0038 25.1 6.4 12 381-392 47-58 (83)
315 3swf_A CGMP-gated cation chann 32.7 1.7E+02 0.0057 23.6 7.2 28 346-373 8-35 (74)
316 2akf_A Coronin-1A; coiled coil 32.7 42 0.0014 22.9 3.2 13 383-395 16-28 (32)
317 1r8e_A Multidrug-efflux transp 32.6 1.1E+02 0.0037 27.6 7.1 11 323-333 66-76 (278)
318 2gkw_A TNF receptor-associated 32.5 70 0.0024 28.1 5.7 33 347-379 2-34 (192)
319 2e7s_A RAB guanine nucleotide 32.4 41 0.0014 29.7 4.1 46 347-392 34-79 (135)
320 3he4_A Synzip6; heterodimeric 32.3 24 0.00083 26.5 2.2 37 358-394 16-52 (56)
321 3m48_A General control protein 32.3 53 0.0018 22.8 3.7 20 371-390 5-24 (33)
322 3abh_A Pacsin2, protein kinase 31.9 2.7E+02 0.0092 25.7 9.8 26 369-394 220-245 (312)
323 2fic_A Bridging integrator 1; 31.8 1.8E+02 0.006 26.1 8.4 12 324-335 144-155 (251)
324 3haj_A Human pacsin2 F-BAR; pa 31.6 4.1E+02 0.014 26.6 13.4 21 375-395 219-239 (486)
325 2x3v_A Syndapin I, protein kin 31.5 3.2E+02 0.011 25.4 13.9 19 376-394 218-236 (337)
326 2wvr_A Geminin; DNA replicatio 31.4 3.1E+02 0.011 25.8 10.0 20 347-366 124-143 (209)
327 3ghg_B Fibrinogen beta chain; 31.3 3.1E+02 0.01 28.6 10.9 7 407-413 176-182 (461)
328 2lf0_A Uncharacterized protein 31.2 47 0.0016 29.0 4.1 16 399-414 56-71 (123)
329 2akf_A Coronin-1A; coiled coil 30.9 62 0.0021 22.1 3.8 25 349-373 3-27 (32)
330 1gk7_A Vimentin; intermediate 30.7 69 0.0023 22.6 4.2 12 377-388 24-35 (39)
331 3viq_B Mating-type switching p 30.4 2.2E+02 0.0077 23.3 8.0 52 349-401 5-56 (85)
332 1zhc_A Hypothetical protein HP 30.4 1.2E+02 0.004 23.8 6.0 26 374-399 45-70 (76)
333 2js5_A Uncharacterized protein 30.4 2.1E+02 0.0071 22.8 7.7 21 373-393 45-65 (71)
334 2nrj_A HBL B protein; enteroto 30.3 2.4E+02 0.0083 27.5 9.6 68 344-414 122-189 (346)
335 1fmh_B General control protein 30.1 1.1E+02 0.0039 20.8 5.0 28 347-374 3-30 (33)
336 3ra3_B P2F; coiled coil domain 30.0 42 0.0014 22.2 2.8 14 379-392 6-19 (28)
337 3haj_A Human pacsin2 F-BAR; pa 29.9 4.3E+02 0.015 26.4 12.8 10 175-184 43-52 (486)
338 1avy_A Fibritin, gpwac M; bact 29.9 1.2E+02 0.004 24.4 5.9 31 348-378 11-41 (74)
339 3pik_A Cation efflux system pr 29.6 3.5E+02 0.012 25.3 14.2 27 343-369 349-375 (446)
340 2wam_A RV2714, conserved hypot 29.5 74 0.0025 31.7 5.8 58 321-396 249-306 (351)
341 3ljm_A Coil Ser L9C; de novo d 29.5 88 0.003 21.1 4.3 24 370-393 5-28 (31)
342 2yo3_A General control protein 29.2 2.3E+02 0.0078 27.6 9.0 8 407-414 250-257 (268)
343 3ghg_C Fibrinogen gamma chain; 29.1 1.7E+02 0.0058 29.9 8.5 36 358-393 97-132 (411)
344 2p90_A Hypothetical protein CG 28.3 85 0.0029 30.5 5.9 25 372-396 242-266 (319)
345 3uux_B Mitochondrial division 28.3 4.1E+02 0.014 25.5 12.3 43 347-396 165-207 (242)
346 3vem_A Helicase protein MOM1; 28.2 2.9E+02 0.0098 23.9 8.5 30 340-369 56-85 (115)
347 3t97_C Nuclear pore glycoprote 28.0 52 0.0018 25.5 3.5 30 367-396 13-42 (64)
348 4b4t_J 26S protease regulatory 27.9 63 0.0022 32.6 5.1 21 346-366 26-46 (405)
349 3swy_A Cyclic nucleotide-gated 27.8 1.5E+02 0.005 21.8 5.7 28 346-373 6-33 (46)
350 3sja_C Golgi to ER traffic pro 27.7 1E+02 0.0034 24.2 5.1 42 349-390 10-56 (65)
351 1tu3_F RAB GTPase binding effe 27.6 49 0.0017 26.9 3.3 61 344-411 11-74 (79)
352 1j1d_B Troponin T, TNT; THIN f 27.5 2.8E+02 0.0094 23.3 10.0 16 357-372 47-62 (106)
353 4dyl_A Tyrosine-protein kinase 27.1 2.2E+02 0.0075 28.0 8.7 72 335-413 320-392 (406)
354 1zxa_A CGMP-dependent protein 27.0 1.1E+02 0.0036 24.1 5.1 27 388-414 26-52 (67)
355 2j5u_A MREC protein; bacterial 26.9 31 0.0011 32.4 2.5 14 379-392 25-38 (255)
356 3mtu_A Tropomyosin alpha-1 cha 26.5 1.2E+02 0.004 23.8 5.4 45 346-390 17-61 (75)
357 2zqm_A Prefoldin beta subunit 26.4 2.4E+02 0.0083 22.4 12.6 15 381-395 78-92 (117)
358 3pik_A Cation efflux system pr 25.9 4.1E+02 0.014 24.8 14.9 7 176-182 152-158 (446)
359 2q6q_A Spindle POLE BODY compo 25.8 2.6E+02 0.0088 22.4 8.1 45 348-392 6-50 (74)
360 2de0_X Alpha-(1,6)-fucosyltran 25.6 3.9E+02 0.013 27.6 10.6 18 396-413 115-132 (526)
361 1u00_A HSC66, chaperone protei 25.6 3.8E+02 0.013 24.2 9.5 14 298-311 113-126 (227)
362 2b5u_A Colicin E3; high resolu 25.4 6.3E+02 0.022 26.8 12.7 10 288-297 265-274 (551)
363 3d5k_A OPRM, outer membrane pr 25.2 4.5E+02 0.015 25.0 14.2 23 348-370 363-385 (474)
364 1fio_A SSO1 protein; four heli 25.0 3.3E+02 0.011 23.4 9.4 17 350-366 47-63 (196)
365 3vp9_A General transcriptional 25.0 2.4E+02 0.0081 23.4 7.2 41 370-414 40-81 (92)
366 3he5_A Synzip1; heterodimeric 25.0 2E+02 0.007 21.0 6.7 18 370-387 7-24 (49)
367 3rrk_A V-type ATPase 116 kDa s 24.9 3.7E+02 0.013 25.3 9.7 19 303-321 198-216 (357)
368 1hs7_A Syntaxin VAM3; UP-and-D 24.8 1.9E+02 0.0066 23.9 6.6 48 349-396 37-87 (97)
369 1hlo_A Protein (transcription 24.4 1.3E+02 0.0045 23.2 5.3 11 379-389 63-73 (80)
370 2w6b_A RHO guanine nucleotide 24.3 2.4E+02 0.0083 21.6 8.4 41 365-408 9-49 (56)
371 3azd_A Short alpha-tropomyosin 24.3 21 0.00072 24.9 0.6 27 347-373 6-32 (37)
372 4gif_A Polycystic kidney disea 24.3 1.9E+02 0.0065 21.2 5.7 36 359-394 7-42 (45)
373 1t3j_A Mitofusin 1; coiled coi 24.2 3.1E+02 0.011 22.8 8.1 14 348-361 50-63 (96)
374 3mud_A DNA repair protein XRCC 24.1 2E+02 0.0068 26.4 7.2 17 351-367 134-150 (175)
375 1kd8_B GABH BLL, GCN4 acid bas 24.0 1.7E+02 0.0057 20.7 5.1 8 378-385 13-20 (36)
376 2ke4_A CDC42-interacting prote 23.9 3E+02 0.01 22.6 9.3 14 347-360 24-37 (98)
377 3tq7_B Microtubule-associated 23.9 1.4E+02 0.0049 24.1 5.5 30 347-376 10-39 (82)
378 2pms_C Pneumococcal surface pr 23.8 2.1E+02 0.0071 25.0 6.9 34 339-372 55-88 (125)
379 1s94_A S-syntaxin; three helix 23.7 2.8E+02 0.0095 24.0 7.9 31 383-413 95-138 (180)
380 1tu3_F RAB GTPase binding effe 23.6 1.1E+02 0.0038 24.8 4.8 22 356-377 9-30 (79)
381 1ez3_A Syntaxin-1A; three heli 23.5 2.9E+02 0.0099 22.2 11.8 27 350-376 52-78 (127)
382 1gk7_A Vimentin; intermediate 23.4 56 0.0019 23.0 2.7 18 352-369 20-37 (39)
383 1hwt_C Protein (heme activator 23.3 31 0.0011 25.9 1.5 22 343-364 56-77 (81)
384 2l5g_B Putative uncharacterize 23.2 1.7E+02 0.0058 21.3 5.2 33 348-380 5-37 (42)
385 2ke4_A CDC42-interacting prote 23.0 3.1E+02 0.01 22.6 7.5 29 365-393 61-89 (98)
386 4ati_A MITF, microphthalmia-as 22.9 82 0.0028 26.5 4.1 21 335-355 34-54 (118)
387 4g1a_A AQ-C16C19 peptide; heli 22.7 29 0.001 23.5 1.0 24 348-371 3-26 (32)
388 4e17_B Catenin alpha-1; four h 22.5 34 0.0011 24.7 1.4 12 171-182 26-37 (40)
389 3thf_A Protein shroom; coiled- 22.5 2.9E+02 0.0098 25.7 7.9 30 340-369 14-43 (190)
390 4aj5_K Spindle and kinetochore 22.4 1.9E+02 0.0066 25.2 6.4 31 360-390 51-81 (123)
391 1m5i_A APC protein; coiled-coi 22.2 3.4E+02 0.012 23.7 7.9 24 390-413 83-106 (125)
392 3q4f_C DNA repair protein XRCC 21.9 81 0.0028 29.3 4.1 24 344-367 160-183 (186)
393 1gk4_A Vimentin; intermediate 21.8 2.9E+02 0.01 21.7 11.3 17 372-388 32-48 (84)
394 3hhm_B NISH2 P85alpha; PI3KCA, 21.7 6E+02 0.02 25.2 12.5 7 407-413 246-252 (373)
395 3rrk_A V-type ATPase 116 kDa s 21.4 4.5E+02 0.015 24.8 9.5 30 345-374 226-255 (357)
396 1g6u_A Domain swapped dimer; d 21.4 1.5E+02 0.0052 21.6 4.7 14 350-363 25-38 (48)
397 3c3f_A Alpha/beta peptide with 21.4 1.3E+02 0.0044 21.0 4.1 17 371-387 6-22 (34)
398 2kho_A Heat shock protein 70; 21.3 2.7E+02 0.0092 28.7 8.4 14 298-311 504-517 (605)
399 2zdi_C Prefoldin subunit alpha 21.1 1.9E+02 0.0066 24.6 6.2 38 348-385 101-138 (151)
400 4ad8_A DNA repair protein RECN 21.1 5.1E+02 0.017 25.8 10.2 82 318-399 158-246 (517)
401 1use_A VAsp, vasodilator-stimu 21.0 2.5E+02 0.0087 20.6 5.8 16 397-412 26-41 (45)
402 3mov_A Lamin-B1; LMNB1, B-type 20.9 3.4E+02 0.012 22.1 9.5 37 349-385 41-77 (95)
403 2z5i_A TM, general control pro 20.9 1.5E+02 0.005 21.9 4.7 17 351-367 11-27 (52)
404 2p22_A Suppressor protein STP2 20.8 2.9E+02 0.0099 25.1 7.5 9 351-359 69-77 (174)
No 1
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=99.48 E-value=3.9e-14 Score=107.60 Aligned_cols=52 Identities=31% Similarity=0.512 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 324 KR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
||.+|+++||+||++||+||++|+++||.+|..|+.||..|..++..|+..+
T Consensus 1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999999999999999999887654
No 2
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=99.31 E-value=9.3e-12 Score=96.24 Aligned_cols=58 Identities=22% Similarity=0.353 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 323 PKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTS 380 (416)
Q Consensus 323 pKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s 380 (416)
+||.+|+.+||+||++||+||++|+.+||.+|..|+.+|..|..++..|+.++..|..
T Consensus 1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~ 58 (63)
T 2wt7_A 1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEF 58 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999877766655543
No 3
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=99.27 E-value=1.6e-11 Score=94.01 Aligned_cols=56 Identities=32% Similarity=0.506 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLT 379 (416)
Q Consensus 324 KR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~ 379 (416)
||.+|+.+||++|++||+||++|+.+||.+|..|+.+|..|..++..|+.++..|.
T Consensus 1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk 56 (61)
T 1t2k_D 1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLK 56 (61)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999988776655554
No 4
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=99.16 E-value=7.2e-11 Score=90.76 Aligned_cols=55 Identities=33% Similarity=0.558 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGL 378 (416)
Q Consensus 324 KR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L 378 (416)
|+.+|..+||++|++||+||++|+.+||.+|..|+.+|..|..++..|+.++..|
T Consensus 1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999999999999999999998877655544
No 5
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=99.04 E-value=3.5e-10 Score=87.93 Aligned_cols=49 Identities=29% Similarity=0.400 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 327 KRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 327 KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
++..+||+||+|||+||++|+.+||.+|..|+.+|..|..++..|..++
T Consensus 12 ~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 12 LKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345699999999999999999999999999999999998888877654
No 6
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=98.97 E-value=1e-09 Score=87.33 Aligned_cols=65 Identities=25% Similarity=0.257 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 322 DPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 322 DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
++...||...||.|++..|+||.+||.+||.+|..|+.++..|..++..|..++..|..||.+||
T Consensus 6 ~~~~~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 6 QEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC-
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34457899999999999999999999999999999999999988888888888888888887764
No 7
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=98.93 E-value=2e-09 Score=83.45 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTS 380 (416)
Q Consensus 324 KR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s 380 (416)
|+.+++.+||.+|+|+|+||++++++|+.+++.|+.+|..|..++..|+.++..|..
T Consensus 2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ 58 (63)
T 1ci6_A 2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKD 58 (63)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888999999999999999999999999999999999999999988776666543
No 8
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=98.48 E-value=8e-07 Score=71.99 Aligned_cols=60 Identities=22% Similarity=0.205 Sum_probs=51.7
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 320 LSDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLT 379 (416)
Q Consensus 320 l~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~ 379 (416)
..|++-..|..+|.++|+|||+++++...+++.+|..|+.||..|..+|..|+.++..|.
T Consensus 11 k~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr 70 (78)
T 1gu4_A 11 KHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLR 70 (78)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666667789999999999999999999999999999999999999998776665553
No 9
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=98.45 E-value=1.1e-06 Score=72.63 Aligned_cols=62 Identities=21% Similarity=0.188 Sum_probs=53.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 320 LSDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE 381 (416)
Q Consensus 320 l~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE 381 (416)
..|++-..|..+|.++|+|||+++++...+++.+|..|+.||..|..+|..|+.++..|..-
T Consensus 11 k~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~l 72 (87)
T 1hjb_A 11 KHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNL 72 (87)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777789999999999999999999999999999999999999999877666655543
No 10
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=98.30 E-value=1.7e-08 Score=86.18 Aligned_cols=83 Identities=24% Similarity=0.325 Sum_probs=56.3
Q ss_pred ChHHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 302 NDAELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE 381 (416)
Q Consensus 302 s~~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE 381 (416)
+..|++..+. .|..--...-|.+||.++||.+|+.||.||++.+.+||.++..|+.+...|..++.. |..|
T Consensus 17 ~v~elN~~L~--~Ls~~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En~~-------l~~E 87 (107)
T 3a5t_A 17 SVRELNQHLR--GLSKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENAS-------MKLE 87 (107)
T ss_dssp CHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTTSH-------HHHT
T ss_pred CHHHHHHHHh--CCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHH
Confidence 4556666663 333333344689999999999999999999999999998887777666655555444 4455
Q ss_pred HHHHHHHHHHHH
Q 014879 382 NNELKFRLQAME 393 (416)
Q Consensus 382 N~ELK~RLqaLE 393 (416)
...||.++++|.
T Consensus 88 ~~~lk~k~e~L~ 99 (107)
T 3a5t_A 88 LDALRSKYEALQ 99 (107)
T ss_dssp TTSSSSCC----
T ss_pred HHHHHHHHHHHH
Confidence 555555555554
No 11
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=98.26 E-value=4.5e-06 Score=69.45 Aligned_cols=82 Identities=18% Similarity=0.270 Sum_probs=58.4
Q ss_pred ChHHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 302 NDAELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE 381 (416)
Q Consensus 302 s~~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE 381 (416)
+-.|++..+. .|..--...-|..||-++||.+|+.+|.||...+.+||..+..|+.+...|. +++..+..|
T Consensus 7 sVreLN~~L~--gls~eev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~-------~e~~~~~~e 77 (90)
T 2wt7_B 7 SVRELNRHLR--GFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLK-------QEVSRLARE 77 (90)
T ss_dssp CHHHHHTTCT--TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
T ss_pred CHHHHHHHHc--CCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
Confidence 3456666663 3332223456889999999999999999999999999987777666555554 455556677
Q ss_pred HHHHHHHHHHH
Q 014879 382 NNELKFRLQAM 392 (416)
Q Consensus 382 N~ELK~RLqaL 392 (416)
-..+|+++++|
T Consensus 78 ~d~~k~k~~~L 88 (90)
T 2wt7_B 78 RDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 77777777665
No 12
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=97.47 E-value=0.00019 Score=52.25 Aligned_cols=37 Identities=30% Similarity=0.521 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTS 380 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s 380 (416)
|.|+.+||.+++.|+..|+.|..++..|++++++|..
T Consensus 2 KaYl~eLE~r~k~le~~naeLEervstLq~EN~mLRq 38 (42)
T 2oqq_A 2 SAYLSELENRVKDLENKNSELEERLSTLQNENQMLRH 38 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5899999999999999999999999998877776653
No 13
>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1
Probab=97.02 E-value=0.00016 Score=60.41 Aligned_cols=54 Identities=20% Similarity=0.300 Sum_probs=46.4
Q ss_pred cccChHHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 299 GEFNDAELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEQ 352 (416)
Q Consensus 299 g~~s~~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~YleELE~ 352 (416)
...+-+|++..++...|.+--+..-|.+||..+||.+|+++|+||...+++|+.
T Consensus 37 v~lpv~efn~lLk~~~Ls~~Ql~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~ 90 (92)
T 1skn_P 37 SEMSLSELQQVLKNESLSEYQRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 90 (92)
T ss_dssp HHSCHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence 345567888899999998888888999999999999999999999999988875
No 14
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=96.08 E-value=0.081 Score=43.30 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
.-++.||.||+.+-...+-|..++..|..++..|..+|.+++..-..|.
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~ 54 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELE 54 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3467788888888777777777777777777777777777554444333
No 15
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.62 E-value=0.14 Score=51.72 Aligned_cols=67 Identities=15% Similarity=0.077 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
..++.+.+.++.+++.+..+++..++++..+..|..+|+.+++.+.++.+.-...+..+++|++.|+
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~ 578 (597)
T 3oja_B 512 THLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLE 578 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555555555555555555566666666665555443322244556666666665
No 16
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.35 E-value=0.25 Score=49.80 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
+.|+..++.++.+.+.+..++..++++...++.+.+.|+.++..||.+.+-+....+.+++|++.+.
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~ 571 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKR 571 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 6677777777777777777777777777777777777888888888877777677777888877764
No 17
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=95.06 E-value=0.16 Score=44.64 Aligned_cols=54 Identities=15% Similarity=0.208 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 342 RKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 342 RKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
+.++.++.|+.+++.+..|...|..++..++.++..+..++.+|+.++..|+.+
T Consensus 72 k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~ 125 (138)
T 3hnw_A 72 KAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKN 125 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444557888899998888988899888888888888888888888888888665
No 18
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=95.01 E-value=0.088 Score=41.14 Aligned_cols=39 Identities=36% Similarity=0.436 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
..-|.||++|..-|+.|+.++..+|+..+.|..||..|+
T Consensus 23 aaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 23 ATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 345789999999999999999999999999999999986
No 19
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=94.45 E-value=1.8 Score=35.85 Aligned_cols=73 Identities=11% Similarity=0.037 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 342 RKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE-------NNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 342 RKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE-------N~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
.-....+.+|.++..++.++..+-.+|..|++.+..|..+ ..+.+.+|..-+..+.-.++-+.+|..-||-|+
T Consensus 20 ~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~RriqllE 99 (101)
T 3u1c_A 20 NALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3334444455555555555544444444444444444444 444444444444455555567778888887765
No 20
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=94.20 E-value=0.67 Score=41.81 Aligned_cols=59 Identities=17% Similarity=0.264 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFL 406 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL 406 (416)
-+.+-..-++.|+.|...|..++..++.....|..||+.|-.|+ |.+..+=.+++|+++
T Consensus 90 el~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RW--M~rk~qEAe~MN~an 148 (152)
T 3a7p_A 90 VIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARW--LKKTEKETEAMNSEI 148 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhc
Confidence 34444567788999999999999999999999999999996553 333344455666665
No 21
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=94.11 E-value=0.71 Score=37.98 Aligned_cols=62 Identities=19% Similarity=0.184 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 014879 352 QKVQTLQTEATTLSAQVTILQRDSA-----GLTSENNELKFRLQAMEQQ-AQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 352 ~KVq~LqsENs~Ls~Qlt~Lqre~~-----~L~sEN~ELK~RLqaLEqQ-aqLrdALnEaL~~EvqrL~ 414 (416)
.||..|+.+|..|..++..++.+.. ....+..+|+.+|..+... ++|. ...+.|..++.+|+
T Consensus 23 dKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~-~e~dnl~~~~~~~k 90 (93)
T 3s4r_A 23 DKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVE-VERDNLAEDIMRLR 90 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 5788888888888888888776543 2466777777777776655 3443 55666888888775
No 22
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=94.10 E-value=1.8 Score=39.55 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Q 014879 324 KRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ--AQLKDG 401 (416)
Q Consensus 324 KR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ--aqLrdA 401 (416)
+.+..+.+-=+.=++.|.+-.+.+.+|+.+|..|+.|...+...+..++.++..|......|...-..|+-. -.|+ +
T Consensus 69 ke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLK-a 147 (168)
T 3o0z_A 69 KDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLK-S 147 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-H
Confidence 334445555556677888888889999999999999988888888776655555555555555444444433 5677 6
Q ss_pred HHHHHHHHHH
Q 014879 402 INSFLLFYYL 411 (416)
Q Consensus 402 LnEaL~~Evq 411 (416)
+...+..||.
T Consensus 148 lQ~~~eqE~~ 157 (168)
T 3o0z_A 148 LQQRLEQEVN 157 (168)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6677777764
No 23
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=93.72 E-value=1.2 Score=49.97 Aligned_cols=53 Identities=19% Similarity=0.183 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 341 ERKMRYISELEQKVQTLQTEATTLSAQVT----ILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 341 eRKk~YleELE~KVq~LqsENs~Ls~Qlt----~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
....+-+++|+.+++.+..|...|..++. .|+.....|..||..|++++..|+
T Consensus 987 ~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 987 LSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555555555544433 333445567777777777777766
No 24
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=93.50 E-value=0.66 Score=37.94 Aligned_cols=47 Identities=28% Similarity=0.347 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
-|.-|.-+|..|+.+|..|..++..++.....|..||..|++.....
T Consensus 21 tI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~w 67 (81)
T 2jee_A 21 TITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGW 67 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 45556667777777777777777777777777777887777666655
No 25
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=93.18 E-value=0.14 Score=41.71 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
.+++..|++.++.+|+.|..+|..|+.+...-..+-..++..|..+-++.
T Consensus 8 ~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~L 57 (79)
T 3cvf_A 8 REETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLL 57 (79)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667788888888888888888888888877777777777777665554
No 26
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=93.17 E-value=0.78 Score=36.73 Aligned_cols=49 Identities=14% Similarity=0.224 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
.++..|++.++.+|+.|..+|..|+.+...-..+-..++..|..+-++.
T Consensus 3 ~~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~L 51 (72)
T 3cve_A 3 HNSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEIL 51 (72)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678889999999999999999999998888888888877777766654
No 27
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=93.09 E-value=0.4 Score=40.76 Aligned_cols=49 Identities=27% Similarity=0.276 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSA-------QVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~-------Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.-+||.++..++.||..|.. ++..|+.++..|..||..|++.-+...++
T Consensus 39 Yl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e~~~~~~~ 94 (104)
T 3s9g_A 39 YLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTENELHRQQ 94 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34678888888777777766 77777777777777777776655555444
No 28
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=93.07 E-value=0.22 Score=40.03 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
..|.+||.|+..++.-...|...|+.-+++...|..+.+.|..|+..++..
T Consensus 14 ~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~~ 64 (78)
T 3efg_A 14 ARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVRST 64 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 467999999999999999999999999999999999999999999988754
No 29
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=92.91 E-value=1.1 Score=41.54 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
+++.|+.++..|...+..|+.+|..|||.
T Consensus 89 ~~~~Lq~el~~l~~~~~~l~~~ireLEq~ 117 (189)
T 2v71_A 89 QVSVLEDDLSQTRAIKEQLHKYVRELEQA 117 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666666666666654
No 30
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=92.63 E-value=0.48 Score=38.53 Aligned_cols=40 Identities=20% Similarity=0.081 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 375 SAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 375 ~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
.+.+..+|.+|+.+|+.|+++..=.-.-.+.++.|++++.
T Consensus 15 lq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~ 54 (79)
T 3cvf_A 15 VQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAA 54 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566666666666666554444444556666666654
No 31
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=92.60 E-value=3.8 Score=33.86 Aligned_cols=59 Identities=19% Similarity=0.204 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Q 014879 335 SAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDS-------AGLTSENNELKFRLQAME 393 (416)
Q Consensus 335 SArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~-------~~L~sEN~ELK~RLqaLE 393 (416)
.+...+.++-.-|..|.++++.|+.+...+..++...+..+ +....++..|..|||-||
T Consensus 34 ~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~RriqllE 99 (101)
T 3u1c_A 34 AAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34444455555666666666666666555555555444322 222335555555555554
No 32
>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=92.38 E-value=0.0067 Score=50.59 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=40.6
Q ss_pred cccChHHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 299 GEFNDAELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMRY 346 (416)
Q Consensus 299 g~~s~~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~Y 346 (416)
...+-+|++..++...|.+.-+..-+.+||..+||++|+++|+||...
T Consensus 41 v~lpv~efn~ll~~~~Ls~~Ql~lIrdiRRRgKNKvAAqnCRKRKld~ 88 (91)
T 2kz5_A 41 VNLPVDDFNELLARYPLTESQLALVRDIRRRGKNKVAAQNYRKRKLET 88 (91)
T ss_dssp HHSCHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHTTSCCCCCCCC
T ss_pred HHCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 345567888888888888877778899999999999999999999753
No 33
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=91.80 E-value=0.98 Score=50.75 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=7.7
Q ss_pred hhHHHHHhhcc
Q 014879 173 ADDLFNEYMNL 183 (416)
Q Consensus 173 ~~dl~~~ym~l 183 (416)
-+||+..|--|
T Consensus 704 ~~eF~~RY~~L 714 (1080)
T 2dfs_A 704 YQEFFSRYRVL 714 (1080)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHH
Confidence 46788888665
No 34
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=91.42 E-value=0.95 Score=33.47 Aligned_cols=44 Identities=30% Similarity=0.400 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
+||.+|..|+.-...|..+++.|..++. .-...||+||..||.+
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~---ssq~KlKqRit~lE~~ 45 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYN---ATQMKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhc
Confidence 5677777777766666666666554444 4456799999999875
No 35
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=91.41 E-value=5.2 Score=32.83 Aligned_cols=75 Identities=16% Similarity=0.114 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Q 014879 340 KERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQA-------MEQQAQLKDGINSFLLFYYLL 412 (416)
Q Consensus 340 ReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa-------LEqQaqLrdALnEaL~~Evqr 412 (416)
+..-....+.+|.++..++.++..+...+..|++.+..|..+...+..+|.. -+..+.-.++-..+|..-||-
T Consensus 18 ~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnRriql 97 (101)
T 3u59_A 18 KENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQL 97 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445556666666666666666666666666665555555555444443 333334444556677777776
Q ss_pred hh
Q 014879 413 LL 414 (416)
Q Consensus 413 L~ 414 (416)
|+
T Consensus 98 lE 99 (101)
T 3u59_A 98 VE 99 (101)
T ss_dssp HT
T ss_pred Hc
Confidence 64
No 36
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=91.39 E-value=1.6 Score=38.16 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 341 ERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 341 eRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
+.=.+.+++++.++..|..+...+..++..+.+++..|..++++|..++..||.
T Consensus 78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~ 131 (138)
T 3hnw_A 78 DSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLET 131 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455666777777777777777777777777777777777777777777753
No 37
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=91.02 E-value=0.8 Score=37.59 Aligned_cols=45 Identities=27% Similarity=0.386 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 343 KMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQL 398 (416)
Q Consensus 343 Kk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqL 398 (416)
-..||..|...++.+..+. .+...|...|..|..|+|.||.|+++
T Consensus 37 svdYI~~Lq~e~~r~~e~e-----------~r~k~le~~n~~l~~riqELE~qa~~ 81 (83)
T 4ath_A 37 SVDYIRKLQREQQRAKDLE-----------NRQKKLEHANRHLLLRVQELEMQARA 81 (83)
T ss_dssp HHHHHHHHHHTHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----------HHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 4789888877766555443 45556889999999999999999875
No 38
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=91.00 E-value=5.7 Score=32.58 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 336 AARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQ 372 (416)
Q Consensus 336 ArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lq 372 (416)
|.....++-.-|..|.++++.|+.+...+..++..++
T Consensus 35 ~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~ 71 (101)
T 3u59_A 35 AEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQ 71 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444455555555555555555555444444444
No 39
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=90.94 E-value=2.4 Score=34.75 Aligned_cols=63 Identities=21% Similarity=0.182 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYY 410 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~Ev 410 (416)
++.-.+.+.|-.|...|+-+++.++.+-..-....+.=|..|+.|.+|...+++..+.|+.|+
T Consensus 15 ee~~~~~E~L~qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~rL~~~l 77 (81)
T 3qh9_A 15 EEKQRKAEELLQELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHSQL 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 455566667778888888888888888888888888888999999999999999888888876
No 40
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=90.88 E-value=0.8 Score=36.69 Aligned_cols=43 Identities=19% Similarity=0.145 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 372 QRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 372 qre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
..+.+.+..+|.+|+.+|+.|+++..=.-.-.+.++.|++++.
T Consensus 6 ~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~ 48 (72)
T 3cve_A 6 HMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLL 48 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566666666666666554333344555566665553
No 41
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=90.58 E-value=2 Score=53.59 Aligned_cols=63 Identities=13% Similarity=0.073 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
+.+++.++.+...|.+++..|+.++..+..|...|+.+++..+........|.+.|..|-.|-
T Consensus 2027 ~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW 2089 (3245)
T 3vkg_A 2027 KLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRW 2089 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccH
Confidence 334445556666677777778888888888888888888888888888888888888887663
No 42
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=90.42 E-value=3 Score=37.62 Aligned_cols=66 Identities=18% Similarity=0.083 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ-AQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ-aqLrdALnEaL~~EvqrL 413 (416)
..|+.++..|+.+...-...+..|+.++..|..|++.+..++..|+.. .+|-+-+-..-..|..+|
T Consensus 78 ~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~qEAe~M 144 (152)
T 3a7p_A 78 KSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTEKETEAM 144 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444556666666666677777777777776663 344444444444444443
No 43
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=90.42 E-value=1.3 Score=37.90 Aligned_cols=45 Identities=18% Similarity=0.202 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
..|+..+..|..++..|...|..|++.++.|....+..-.-|+.|
T Consensus 38 ~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~ 82 (111)
T 2v66_B 38 SVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDF 82 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHH
Confidence 334444444444444444444444444444444444443333333
No 44
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=90.32 E-value=5.4 Score=36.46 Aligned_cols=49 Identities=16% Similarity=0.290 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 336 AARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 336 ArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
-.-.|.||.. .||...++.++..+..|..++..|+.....|..+...|.
T Consensus 27 E~~~rlkK~~--tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQ 75 (168)
T 3o0z_A 27 DTAVRLRKSH--TEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQ 75 (168)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444443 444444555555555555555544444444444444443
No 45
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=90.31 E-value=0.91 Score=36.64 Aligned_cols=47 Identities=23% Similarity=0.318 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQ 397 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaq 397 (416)
++||.||..|+.-...|..+++.|..++. .-...||+||..||.+..
T Consensus 3 ~dlEEKv~~LE~sld~LQTrfARLLaEy~---ssQ~KLKqRit~LE~~~~ 49 (74)
T 3swf_A 3 MGLEEKVTRMESSVDLLQTRFARILAEYE---SMQQKLKQRLTKVEKFLK 49 (74)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhc
Confidence 45777777777777667666666655544 445679999999998765
No 46
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=89.86 E-value=6.7 Score=38.63 Aligned_cols=67 Identities=16% Similarity=0.052 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 345 RYISELEQKVQTLQTEATTLSAQ-------VTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Q-------lt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
.+...|++++..+|.--..+..| +-.|+.- |..+...-..|++.+|.+..-..+..+-+..||.||+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
T 3mq9_A 397 NVTHLLQQELTEAQKGFQDVEAQAATANHTVMALMAS---LDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLR 470 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444445444444444444443 3334433 2333333334777777765544455566688888886
No 47
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=89.57 E-value=3.9 Score=34.69 Aligned_cols=25 Identities=8% Similarity=0.255 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 369 TILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 369 t~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
..|.+.......-.-+|..++++|.
T Consensus 72 ~~lrK~lD~~~l~r~dLE~~iesL~ 96 (119)
T 3ol1_A 72 QSFRQDVDNASLARLDLERKVESLQ 96 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhcccHHHHHHHHHHHHHHHHH
Confidence 3333333333333334444444443
No 48
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=89.43 E-value=1.6 Score=36.84 Aligned_cols=29 Identities=24% Similarity=0.338 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
.+..|..+|..|+.||..|..++..|+-+
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~ 41 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQ 41 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666666665555555533
No 49
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=89.39 E-value=1.6 Score=37.15 Aligned_cols=27 Identities=33% Similarity=0.465 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
|.+|-+.|+.|+.|...|..+...|+.
T Consensus 38 i~elrr~iq~L~~el~~l~~~~~~LE~ 64 (129)
T 3tnu_B 38 ISEMNRMIQRLRAEIDNVKKQCANLQN 64 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 444444444444444444444433333
No 50
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=89.11 E-value=1.5 Score=32.28 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFR 388 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~R 388 (416)
.+..||.+|..|+.||.+|..+.-.-..-..-|..|...|+.+
T Consensus 4 lvaqlenevaslenenetlkkknlhkkdliaylekeianlrkk 46 (49)
T 3he5_A 4 LVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKK 46 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 4667888888888888888766544333333444444444433
No 51
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=89.08 E-value=0.17 Score=43.15 Aligned_cols=25 Identities=32% Similarity=0.408 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 374 DSAGLTSENNELKFRLQAMEQQAQL 398 (416)
Q Consensus 374 e~~~L~sEN~ELK~RLqaLEqQaqL 398 (416)
+...|..+|..|..|||.||.|++.
T Consensus 92 ~~~~l~~~n~~L~~riqeLE~~a~~ 116 (118)
T 4ati_A 92 RQKKLEHANRHLLLRVQELEMQARA 116 (118)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999998874
No 52
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=89.07 E-value=2.5 Score=47.47 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
.+|+.+++.++.+...+..++..++.+...|..+..+|+
T Consensus 860 ~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~ 898 (1184)
T 1i84_S 860 QAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQ 898 (1184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444444333
No 53
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=89.06 E-value=1.3 Score=32.40 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 355 QTLQTEATTLSAQVTILQRDSAGLTSENNELKFR 388 (416)
Q Consensus 355 q~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~R 388 (416)
..|+.....|..++..|++++..|..||.-|++-
T Consensus 6 ~eLE~r~k~le~~naeLEervstLq~EN~mLRqv 39 (42)
T 2oqq_A 6 SELENRVKDLENKNSELEERLSTLQNENQMLRHI 39 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3445555555555555555555555555544443
No 54
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=88.98 E-value=2.4 Score=32.19 Aligned_cols=45 Identities=20% Similarity=0.268 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
.+.|-++|+.|..||+.|+.++..=-.+...|+.|-..+|.-+..
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~ 49 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQ 49 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHH
Confidence 367888999999999999999888778888888877766654443
No 55
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=88.15 E-value=4.6 Score=41.90 Aligned_cols=46 Identities=17% Similarity=0.333 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSAQVTILQR-----------DSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~Qlt~Lqr-----------e~~~L~sEN~ELK~RLqaLEqQ 395 (416)
|..+++.|+++.+.++.+|..+.. +...|..|-++|+.+|..|+.+
T Consensus 82 ~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~ 138 (501)
T 1wle_A 82 LREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPK 138 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555666666655442 3345666666666666666544
No 56
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=87.99 E-value=0.63 Score=44.15 Aligned_cols=39 Identities=21% Similarity=0.144 Sum_probs=26.8
Q ss_pred HhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 315 LAEIALSDPKRAKRILANRQSAARSKERKMRYISELEQK 353 (416)
Q Consensus 315 LaElAl~DpKR~KRiLkNRESArRSReRKk~YleELE~K 353 (416)
+..+..-++||.+|+|+-=.-=.+.|+-|..-++++-.+
T Consensus 111 l~DL~kP~~~Rt~~iLSalINF~~FRE~~~~~~~e~~~~ 149 (250)
T 2ve7_C 111 TADILCPKAKRTSRFLSGIINFIHFREACRETYMEFLWQ 149 (250)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677889999999877666666766666654444333
No 57
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=87.74 E-value=1.3 Score=33.85 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 366 AQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 366 ~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.....|+.++..|..+|.+|+.+|+.|+.+
T Consensus 23 ~~~~~le~~~~~L~~~N~~L~~~i~~L~~E 52 (63)
T 1ci6_A 23 AEQEALTGECKELEKKNEALKERADSLAKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777777777777777777777655
No 58
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=87.57 E-value=0.6 Score=32.54 Aligned_cols=27 Identities=30% Similarity=0.471 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
|..||.||..|-.+|+.|..++..|+.
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 568999999999999998888877653
No 59
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=87.42 E-value=0.72 Score=32.30 Aligned_cols=28 Identities=29% Similarity=0.249 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.|..||.||..|-.+|+.|..++..|+.
T Consensus 2 RMnQLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 2 RMXQLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 4678999999988888888888776653
No 60
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=87.32 E-value=5 Score=32.24 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
+...++.....|..||..|+.+|+.|
T Consensus 37 r~~e~~~r~~~L~~eN~~L~~~v~~L 62 (78)
T 1gu4_A 37 RNLETQHKVLELTAENERLQKKVEQL 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555666666666666666554
No 61
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=87.28 E-value=1.1 Score=37.98 Aligned_cols=32 Identities=31% Similarity=0.385 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 360 EATTLSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 360 ENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
+...|..+|..|+.++..|..++..|..+|..
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555543
No 62
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=87.21 E-value=1.2 Score=37.02 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 363 TLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 363 ~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
.|..++..|+.+...|..||.+++..+..+
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~ 81 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAY 81 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444444333
No 63
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=86.85 E-value=0.71 Score=44.54 Aligned_cols=39 Identities=21% Similarity=0.351 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+.+|+.++..|+..|..|...++.+++++..|..|+..|
T Consensus 56 l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL 94 (251)
T 3m9b_A 56 IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 94 (251)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555555555444444444444444444444333
No 64
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=86.77 E-value=0.82 Score=36.12 Aligned_cols=23 Identities=26% Similarity=0.359 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSA 366 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~ 366 (416)
..||..|+.+++.|+.+...|..
T Consensus 46 i~YI~~L~~~~~~l~~e~~~L~~ 68 (83)
T 1nkp_B 46 TEYIQYMRRKNHTHQQDIDDLKR 68 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666666665555544444333
No 65
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=86.53 E-value=6.3 Score=36.71 Aligned_cols=64 Identities=20% Similarity=0.179 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHH-HHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL-----QAM-EQQAQLKDGINSFLLFYYLL 412 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL-----qaL-EqQaqLrdALnEaL~~Evqr 412 (416)
.+|+.++..|+.+|..|...+..|..++..+..+..++...| .-| |..++|| .|.+.|-.|+|.
T Consensus 135 ~~~~~~~~~L~~e~~~l~~~~~~l~~qlE~~v~~K~~~E~~L~~KF~~lLNeKK~KIR-~lq~~Ll~~~~~ 204 (213)
T 1ik9_A 135 AENQAKNEHLQKENERLLRDWNDVQGRFEKAVSAKEALETDLYKRFILVLNEKKTKIR-SLHNKLLNAAQE 204 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHHH
Confidence 355566666666666666666666666666666555554332 112 2335666 344344444443
No 66
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=86.52 E-value=2.3 Score=36.42 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
..|+.+++.+...+..|..++..++.
T Consensus 48 q~L~~el~~l~~~~~sLE~~l~e~e~ 73 (131)
T 3tnu_A 48 QNLEIELQSQLSMKASLENSLEETKG 73 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444444444444444444444443
No 67
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=86.45 E-value=1.9 Score=43.20 Aligned_cols=53 Identities=17% Similarity=0.087 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 355 QTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 355 q~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
..|+.+...|..++..|++++..+..++.+|++++...+ .+...|+.++|.|+
T Consensus 6 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~rr~l~n~~~elk 58 (403)
T 4etp_A 6 AALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEE-------TVRRTLHNELQELR 58 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHcC
Confidence 334444444444444444444445555555544444333 34445577777665
No 68
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=86.44 E-value=2.6 Score=44.54 Aligned_cols=44 Identities=11% Similarity=0.250 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 338 RSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE 381 (416)
Q Consensus 338 RSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE 381 (416)
.....+.+|-++||++++.|+.+...-..+|..||..+..+..+
T Consensus 103 dNdNtynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~k 146 (562)
T 3ghg_A 103 NRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVD 146 (562)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666666677776666666655555555555444444444
No 69
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=86.20 E-value=1.2 Score=31.48 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
.|..||.||+.|-.+++.|..++..|+.-
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~l 30 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKKK 30 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46789999999999999888888876643
No 70
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=85.96 E-value=2.1 Score=45.22 Aligned_cols=61 Identities=13% Similarity=0.079 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 328 RILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVT-ILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 328 RiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt-~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
.+.+||..+-.-=+-+++| |..++..-. +|.....|++ .|+++++-|..+.+.-..+|+.|
T Consensus 75 dlsKnsKdseqy~k~~~E~---Lr~rq~q~~-dNdNtynE~S~ELRRrIqyLKekVdnQlsnIrvL 136 (562)
T 3ghg_A 75 EYQKNNKDSHSLTTNIMEI---LRGDFSSAN-NRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLL 136 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TSSHHHHHH-HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhchhHHHHHHHHHHH---HHHHHHhhh-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555554443333333 323333322 3334445555 55555555555554444555554
No 71
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=85.73 E-value=3.8 Score=35.72 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 354 VQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 354 Vq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
|+.|+.|+.+|..+|..+..+...|..+|..|..|+
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~ 108 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERLRRENQVLSVRI 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHh
Confidence 444444444444444444444444445555444444
No 72
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=85.70 E-value=13 Score=31.53 Aligned_cols=29 Identities=10% Similarity=0.311 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
|..|+.+++.++..+..|..++..++.++
T Consensus 45 iq~L~~el~~l~~~~~~LE~~l~e~e~~~ 73 (129)
T 3tnu_B 45 IQRLRAEIDNVKKQCANLQNAIADAEQRG 73 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 56667777777777777776666665544
No 73
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=85.18 E-value=13 Score=31.90 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 338 RSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 338 RSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+-+..-+.||.+|+.+|..|+.|...-+.+...+.-++..|..|...|
T Consensus 33 ~l~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l 80 (120)
T 3i00_A 33 NMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDEL 80 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346667788888888888888887776666555554455555444444
No 74
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=85.13 E-value=15 Score=36.22 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
+.+.....+++...|..||..|+..++.+.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3oja_A 433 AIRDWDMYQHKETQLAEENARLKKLNGEAD 462 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHhhhhhhhhhhhh
Confidence 334444444444444455555544444443
No 75
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=85.13 E-value=1.1 Score=31.33 Aligned_cols=28 Identities=7% Similarity=0.209 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.|..||.||+.|-.+|..|..++..|+.
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 4678999999999999888888876653
No 76
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=85.04 E-value=1.1 Score=31.79 Aligned_cols=29 Identities=24% Similarity=0.461 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
.|..||.||..|..+++.|..++..|+.-
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~l 30 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLEKE 30 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35789999999999999888888877644
No 77
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=84.83 E-value=1.6 Score=34.84 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 343 KMRYISELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 343 Kk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
-..||..|+.+.+.|+.|...|..++..|+++.
T Consensus 45 A~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 45 AKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888888887777777666655555554443
No 78
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=84.73 E-value=13 Score=29.32 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
..++.++.++...+..+..+...+..|++.+..|..+...+..+|
T Consensus 20 ~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l 64 (81)
T 1ic2_A 20 DRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESL 64 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444444444444444433
No 79
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=84.67 E-value=15 Score=30.25 Aligned_cols=41 Identities=15% Similarity=0.293 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+.+.+||..-..+..+...+..+...|..+-...-.+-+.+
T Consensus 25 ~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~ 65 (96)
T 3q8t_A 25 QELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEF 65 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33444444444444444444444444433333333333444
No 80
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=84.43 E-value=8.8 Score=37.78 Aligned_cols=26 Identities=23% Similarity=0.220 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
++..-+.++..|+.|..+|.++|+.+
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (471)
T 3mq9_A 437 EKAQGQKKVEELEGEITTLNHKLQDA 462 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444444433
No 81
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=84.43 E-value=6.2 Score=40.24 Aligned_cols=46 Identities=13% Similarity=0.276 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSAQVTILQR---DSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~Qlt~Lqr---e~~~L~sEN~ELK~RLqaLEqQ 395 (416)
|..+++.|+.+.+.++.+|..+.. +...|..+-++|+.+|..++.+
T Consensus 43 ~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 91 (455)
T 2dq0_A 43 KLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENE 91 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555554332 2345667777777777776654
No 82
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=84.32 E-value=2.9 Score=31.39 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
.+..|+.+...|..+|.+|+.+|+.|+.
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~ 50 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRN 50 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555666666666665555543
No 83
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=84.29 E-value=3 Score=42.11 Aligned_cols=53 Identities=21% Similarity=0.042 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 355 QTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 355 q~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
..|+.|...|..++..|++++..+..|+.+++++|... +.+...|..+++.|+
T Consensus 6 ~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~-------~~~rr~l~n~~~~l~ 58 (412)
T 3u06_A 6 AALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQS-------NMERKELHNTVMDLR 58 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhC
Confidence 45555555666666666666666666666666555442 234445666776664
No 84
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=84.28 E-value=4.1 Score=30.47 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKF 387 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~ 387 (416)
|.++..|..-|..|..+++.|+..|..+..|+..|+.
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 6788888899999999999999999998888766643
No 85
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=84.09 E-value=1.8 Score=30.18 Aligned_cols=27 Identities=7% Similarity=0.256 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
|..||.||+.|-.+|..|..++..|+.
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 578999999999998888888876653
No 86
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=83.97 E-value=2 Score=32.27 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
|..++..|+.++..|..++.+|+.+|.
T Consensus 24 Lk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 24 LRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333334444445555666655543
No 87
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=83.87 E-value=10 Score=32.35 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSA 376 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~ 376 (416)
|.+|-..|+.|+.|...|..+...|+..+.
T Consensus 40 i~elrr~iq~L~~el~~l~~~~~sLE~~l~ 69 (131)
T 3tnu_A 40 ISELRRTMQNLEIELQSQLSMKASLENSLE 69 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 444444444444444444444444444443
No 88
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=83.58 E-value=24 Score=31.58 Aligned_cols=16 Identities=25% Similarity=-0.049 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHhhcC
Q 014879 401 GINSFLLFYYLLLLHL 416 (416)
Q Consensus 401 ALnEaL~~EvqrL~ql 416 (416)
+-+..|..||.||..|
T Consensus 140 ~~~~~~~~~~~~~~~~ 155 (155)
T 2efr_A 140 SKNYHLENEVARLKKL 155 (155)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred cchHHHHHHHHHhhcC
Confidence 5566788999999765
No 89
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=83.04 E-value=4.3 Score=37.78 Aligned_cols=47 Identities=17% Similarity=0.195 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
++.++.-+.-|+.|+.||..|..|+...+.++..|..+...|+.++.
T Consensus 12 q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~ 58 (190)
T 4emc_A 12 KQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVK 58 (190)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34455556678888888888888888766666666665555555553
No 90
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=82.59 E-value=24 Score=36.56 Aligned_cols=69 Identities=16% Similarity=0.116 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE-----------NNELKFRLQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE-----------N~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
..+.+|..+...++.+...|.++...+.++...++.. -.+|+.++..|..+.+--++....+.+|++.+
T Consensus 70 ~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~ 149 (501)
T 1wle_A 70 PGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKEAQLEEQFYLR 149 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567777788888888888888888888887776543 23666666666666554445555566666554
No 91
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=82.56 E-value=18 Score=38.24 Aligned_cols=73 Identities=21% Similarity=0.213 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHh
Q 014879 338 RSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAG-LTSENNELKFRLQAMEQQAQLKD---GINSFLLFYYLLL 413 (416)
Q Consensus 338 RSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~-L~sEN~ELK~RLqaLEqQaqLrd---ALnEaL~~EvqrL 413 (416)
..+++.++.-.-+|.+-+.++.....|.+++. ++... +...++-|..+|+. |...|++ ...+.|+.||+.|
T Consensus 505 ~l~~~~~~~~~~~~~~~~~~~e~~~ql~~kme---~~~~~~~~e~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~ei~~l 579 (592)
T 1f5n_A 505 MLHEMQRKNEQMMEQKERSYQEHLKQLTEKME---NDRVQLLKEQERTLALKLQE--QEQLLKEGFQKESRIMKNEIQDL 579 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH--HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444455555555555555555433 33333 33344444444433 1222222 5667888899888
Q ss_pred hc
Q 014879 414 LH 415 (416)
Q Consensus 414 ~q 415 (416)
.+
T Consensus 580 ~~ 581 (592)
T 1f5n_A 580 QT 581 (592)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 92
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=82.53 E-value=4.8 Score=32.40 Aligned_cols=42 Identities=19% Similarity=0.235 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 353 KVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 353 KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
++..|+....--..-...|.-+...|.-||+-|.+||+.|.+
T Consensus 33 eI~~L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl~~l~~ 74 (75)
T 3a7o_A 33 EIRRLKEVIALKNKNTERLNDELISGTIENNVLQQKLSDLKK 74 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHHHHHhc
Confidence 333344333333444556677788899999999999998865
No 93
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=82.47 E-value=19 Score=31.26 Aligned_cols=31 Identities=29% Similarity=0.341 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGL 378 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L 378 (416)
.+|+.+++.|+.+|..|..++..++.++..|
T Consensus 53 ~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l 83 (155)
T 2oto_A 53 EELEKAKQALEDQRKDLETKLKELQQDYDLA 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777777777777777776666544
No 94
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=82.41 E-value=1.6 Score=30.64 Aligned_cols=28 Identities=7% Similarity=0.376 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.|..||.||+.|-.+|..|..++..|+.
T Consensus 2 RMnQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 2 RMKQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4678999999999999888888876653
No 95
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=82.29 E-value=2.3 Score=29.61 Aligned_cols=27 Identities=11% Similarity=0.228 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
|..||.||+.|-.++..|..++..|+.
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 578999999999999888888876653
No 96
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=82.26 E-value=1.6 Score=30.58 Aligned_cols=28 Identities=21% Similarity=0.332 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.+..||.||+.|-.+|..|..++..|+.
T Consensus 2 RMnQLEdkVEeLl~~~~~Le~eV~RL~~ 29 (34)
T 2hy6_A 2 KVKQLADAVEELASANYHLANAVARLAK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4678999999999999888888877654
No 97
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=82.21 E-value=31 Score=31.85 Aligned_cols=68 Identities=22% Similarity=0.239 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHH--HHHHHHHHHHhh
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ--------AQLKDGI--NSFLLFYYLLLL 414 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ--------aqLrdAL--nEaL~~EvqrL~ 414 (416)
+..|+..+..|+..+..|..+|..|+..++.|....+.+..-|+.|+.. +-|..-| -+.|+.++|||+
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alLE~El~EKe~l~~~~QRLk 167 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLK 167 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667777777777777777777777777777777766665555444432 2222211 345666677765
No 98
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=82.14 E-value=24 Score=30.37 Aligned_cols=45 Identities=22% Similarity=0.247 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q 014879 334 QSAARSKERKMRYISELEQKVQTLQT---EATTLSAQVTILQRDSAGL 378 (416)
Q Consensus 334 ESArRSReRKk~YleELE~KVq~Lqs---ENs~Ls~Qlt~Lqre~~~L 378 (416)
.+|...=..|+..|++|..++..+.. ...-|.+|+.....++..=
T Consensus 34 ~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aE 81 (110)
T 2v4h_A 34 QQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAE 81 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 34444445566666677666666665 4555666666666666543
No 99
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=82.12 E-value=23 Score=30.27 Aligned_cols=30 Identities=23% Similarity=0.339 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 366 AQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 366 ~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.+++.||.+++.|..+|..|+.+|..|||.
T Consensus 35 ~~~~~Lq~El~~lr~~~~~l~~~iReLEq~ 64 (111)
T 2v66_B 35 KQVSVLEDDLSQTRAIKEQLHKYVRELEQA 64 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356677778888888888888888888775
No 100
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=82.01 E-value=1.9 Score=30.21 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
++.++...+++...|..+|..|.+++..||
T Consensus 5 mRrKn~a~qqDIddlkrQN~~Le~Qir~le 34 (34)
T 1a93_B 5 MRRKNDTHQQDIDDLKRQNALLEQQVRALX 34 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HhhhhHhhHhhHHHHHHHHHHHHHHHHhcC
Confidence 455666667777777777777777766654
No 101
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=81.78 E-value=13 Score=29.90 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSA--------------GLTSENNELKFRLQAMEQQ-AQLKDGINSFLLFYYL 411 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~--------------~L~sEN~ELK~RLqaLEqQ-aqLrdALnEaL~~Evq 411 (416)
|.+|..+|..+..+|..|..++..++.... .+.++-..||.-+..+... ..|. +..+.|++|+.
T Consensus 2 i~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a~l~r~dLE-~kvesL~eEl~ 80 (86)
T 3swk_A 2 MRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLE-RKVESLQEEIA 80 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 345556666666666665555555444333 2333333344333332222 3444 66778899988
Q ss_pred HhhcC
Q 014879 412 LLLHL 416 (416)
Q Consensus 412 rL~ql 416 (416)
=|+++
T Consensus 81 fLkk~ 85 (86)
T 3swk_A 81 FLKKL 85 (86)
T ss_dssp HHTTC
T ss_pred HHhhc
Confidence 87754
No 102
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=81.76 E-value=19 Score=29.01 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
....+||.+...|..+.+.|..|++.++..+..|.....+|..+|..|+.
T Consensus 35 ~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~~ 84 (89)
T 3bas_A 35 RIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLKK 84 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467889999999999999999999999999999998888888887753
No 103
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=81.76 E-value=1.6 Score=42.11 Aligned_cols=42 Identities=12% Similarity=0.181 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
|.+++.|+.++..|..++..|...+..+..|...||.+|+.|
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL 94 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 94 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555555555555555555555555555555555554444
No 104
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=81.37 E-value=22 Score=35.80 Aligned_cols=51 Identities=14% Similarity=0.252 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQ--------RDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lq--------re~~~L~sEN~ELK~RLqaLEqQ 395 (416)
..+.+|..+-..++.+...|.++...+. .+...|..+-++|+.+|..++.+
T Consensus 28 ~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 86 (421)
T 1ses_A 28 EALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEA 86 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444333 33456777777777777777654
No 105
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=81.31 E-value=13 Score=30.39 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 369 TILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 369 t~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
..++.+...|..||..|+.+|+.|+.+
T Consensus 39 ~e~~~r~~~Le~EN~~Lr~~v~~L~~E 65 (87)
T 1hjb_A 39 LETQHKVLELTAENERLQKKVEQLSRE 65 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555556666665555555444
No 106
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=81.27 E-value=3.8 Score=33.11 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEA 361 (416)
Q Consensus 344 k~YleELE~KVq~LqsEN 361 (416)
..||..|+.+.+.++.+.
T Consensus 51 ~~YI~~L~~~~~~l~~~~ 68 (88)
T 1nkp_A 51 TAYILSVQAEEQKLISEE 68 (88)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 356666555555544443
No 107
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=80.81 E-value=2.5 Score=30.04 Aligned_cols=29 Identities=28% Similarity=0.335 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
-.||.+|...++.-+.++..|..||.+|+
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL~ 34 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKELA 34 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 35899999999999999999999999985
No 108
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y
Probab=80.63 E-value=8.8 Score=29.65 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 330 LANRQSAARSKERKMRYISELEQKVQTLQTEATTL 364 (416)
Q Consensus 330 LkNRESArRSReRKk~YleELE~KVq~LqsENs~L 364 (416)
-+||.+++++|.|=+..++-...-...-..||..|
T Consensus 7 yknr~asrk~rakfkn~lqh~r~vaaaks~en~rl 41 (63)
T 2c9l_Y 7 YKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRL 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Confidence 68999999999998877666554444444455444
No 109
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=80.60 E-value=15 Score=29.83 Aligned_cols=64 Identities=23% Similarity=0.100 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQV-------TILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLL 412 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Ql-------t~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~Evqr 412 (416)
.+-..|+.|-.||++|.+.- ..|..+...|..|+..|+..+.++.+...--..-+.-|.+|++|
T Consensus 6 gmgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeElkr 76 (77)
T 2w83_C 6 FMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEELRK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556777777777766532 34566778888888888888888776532222334445556554
No 110
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=80.46 E-value=2 Score=30.09 Aligned_cols=27 Identities=7% Similarity=0.255 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQ 372 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lq 372 (416)
.|..||.||+.|-.+|..|..++..|+
T Consensus 2 RM~QLEdKVEeLl~~n~~Le~EV~RLk 28 (34)
T 1uo4_A 2 RMKQIEDKGEEILSKLYHIENELARIK 28 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357899999999998888888877665
No 111
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=80.36 E-value=9.4 Score=35.52 Aligned_cols=51 Identities=14% Similarity=0.257 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
|-.-+|.++..-....+.|..++..|.+++.....|+..|+.+|++++++.
T Consensus 7 YK~~~q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 7 YKNSVKQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333444444444444555555555555555555555555555555555443
No 112
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=80.24 E-value=4.5 Score=31.19 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
|+++..|...|-.|..++..|+.+|.....|+..|.
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~ 45 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLN 45 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778888888888899988888888888877664
No 113
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=79.63 E-value=18 Score=27.39 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 366 AQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 366 ~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
..+..|+.++..|..+|..|+.+|+.|..+
T Consensus 23 ~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e 52 (63)
T 2wt7_A 23 ELTDTLQAETDQLEDEKSALQTEIANLLKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346667777777778888887777766554
No 114
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=79.62 E-value=4.1 Score=32.16 Aligned_cols=31 Identities=29% Similarity=0.440 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 363 TLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 363 ~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
.|..++..|+..+..|..||..|+.+|..|.
T Consensus 33 ~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~ 63 (70)
T 1gd2_E 33 ALETQVVTLKELHSSTTLENDQLRQKVRQLE 63 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555556666666666665553
No 115
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=79.55 E-value=3.1 Score=28.46 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
+..||..|.+.+.||-+|..++..|+.+|
T Consensus 3 vaqlekevaqaeaenyqleqevaqlehec 31 (33)
T 1fmh_A 3 VAQLEKEVAQAEAENYQLEQEVAQLEHEC 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 45678888888888777777777666543
No 116
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=79.40 E-value=10 Score=32.24 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA-QLKDGINSFLLFY 409 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa-qLrdALnEaL~~E 409 (416)
-.|.-.|...+..|+.++..|.......-.++++|+... +|+ +.|..|..|
T Consensus 36 IqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~-~ENq~L~~e 87 (104)
T 3s9g_A 36 IKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLR-AENLQLLTE 87 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH-HHHHHHHHH
Confidence 334444444555555555445554444445566655442 333 444444444
No 117
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=79.37 E-value=26 Score=30.14 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 354 VQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 354 Vq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
|+.|+.++.-...-+..=...-..+..|+.+|+.+|..|.
T Consensus 64 I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq 103 (110)
T 2v4h_A 64 VPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQ 103 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHH
Confidence 4444444444444444444444455555555555555443
No 118
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=78.58 E-value=8.8 Score=33.05 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 353 KVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 353 KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
-|..|+.....|.+++..-....+....||..|+..++.+
T Consensus 41 ~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l 80 (120)
T 3i00_A 41 VVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDEL 80 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444443334444444444444444443
No 119
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=78.09 E-value=26 Score=35.74 Aligned_cols=70 Identities=13% Similarity=0.013 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE---NNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE---N~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
..+.+|..+-..++.+...|.++...+.++...++.. -.+|+.++..|..+.+--++....+.+|++.+.
T Consensus 31 ~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (455)
T 2dq0_A 31 DEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYL 103 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777777777777777777776665432 346666777666665555555556666666543
No 120
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=78.02 E-value=2.5 Score=31.92 Aligned_cols=28 Identities=18% Similarity=0.316 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
.+..|+.++..|..+|.+|+.++..|+.
T Consensus 23 ~~~~Le~~v~~L~~~n~~L~~~v~~L~~ 50 (62)
T 1jnm_A 23 RIARLEEKVKTLKAQNSELASTANMLRE 50 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666677777777666665543
No 121
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=77.62 E-value=40 Score=30.30 Aligned_cols=64 Identities=16% Similarity=0.214 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSE---NNELKFRLQAMEQQAQLKDGINSFLLFYYLLLLHL 416 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE---N~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ql 416 (416)
|.....++.|...|++.+ ..+-+.++..+ ...++.|...|+.+..=++.+.+.|+.+++.|+++
T Consensus 78 E~~~~~ie~ElEeLTasL--FeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v 144 (154)
T 2ocy_A 78 EEEADKLNKEVEDLTASL--FDEANNMVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKV 144 (154)
T ss_dssp HTHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555554432 22233333222 23355666666666666678888999999998764
No 122
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=77.44 E-value=17 Score=29.50 Aligned_cols=45 Identities=13% Similarity=0.293 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
+-+.+|-.+++.|+.|...|+.++..++.++..|....+++-..|
T Consensus 20 q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dL 64 (83)
T 2xdj_A 20 QLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQI 64 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445778888888888888888888888888877777777664333
No 123
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=77.39 E-value=12 Score=28.06 Aligned_cols=37 Identities=14% Similarity=0.175 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENN 383 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ 383 (416)
|.+|..+|+.|-.+...|..++..|+.+......|-.
T Consensus 6 i~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~ 42 (52)
T 1jcd_A 6 ADQASSDAQTANAKADQASNDANAARSDAQAAKDDAA 42 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566665555555555555555544444433333
No 124
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=77.33 E-value=20 Score=35.47 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 359 TEATTLSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 359 sENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
.+....+.+++.+.++.+.+..+..++..+++.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (487)
T 3oja_A 435 RDWDMYQHKETQLAEENARLKKLNGEADLALAS 467 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHh
Confidence 334444444444444444444444444444433
No 125
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=77.22 E-value=4.6 Score=30.26 Aligned_cols=29 Identities=10% Similarity=0.282 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 353 KVQTLQTEATTLSAQVTILQRDSAGLTSE 381 (416)
Q Consensus 353 KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE 381 (416)
.|..|+.||..|+.++..|+.++..|..+
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555544443
No 126
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=76.88 E-value=32 Score=28.87 Aligned_cols=46 Identities=11% Similarity=0.188 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
+..|+.++.....+...|..+++.-+........++..+...|+.|
T Consensus 14 l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeL 59 (97)
T 2eqb_B 14 YNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDL 59 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444555555555444444444444444444444444433
No 127
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=76.81 E-value=17 Score=28.95 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTIL------QRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~L------qre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
+-++.|+.++..|+.+...|..++..- -..++.|..+..++...|..+...+
T Consensus 22 rEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erW 79 (89)
T 2lw1_A 22 RELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERW 79 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999888641 2456677777777777777766554
No 128
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=76.24 E-value=9.1 Score=39.73 Aligned_cols=47 Identities=11% Similarity=0.195 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSAQVTILQR---DSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~Qlt~Lqr---e~~~L~sEN~ELK~RLqaLEqQa 396 (416)
|..+++.|+.+-+.++.+|..+.+ +...|..|-++|+.+|..|+.+.
T Consensus 45 ~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~ 94 (485)
T 3qne_A 45 LRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKE 94 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555433 23567777777777777776553
No 129
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=75.98 E-value=18 Score=37.61 Aligned_cols=70 Identities=6% Similarity=-0.085 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE---NNELKFRLQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE---N~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
...+.+|..+-..++.+...|.++...+.+++..++.. -.+|+.++..|.++.+--++....+.+|++.+
T Consensus 32 ~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~ 104 (485)
T 3qne_A 32 VDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSK 104 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777777777777777777777776665542 23566666666555443334444455555443
No 130
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=75.70 E-value=6.8 Score=31.88 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
-.||..|..+|..++.++..|..||..|+.=+.
T Consensus 33 L~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~ 65 (79)
T 2zxx_A 33 LKENEKLHKEIEQKDSEIARLRKENKDLAEVAE 65 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999854433
No 131
>3m0d_C TNF receptor-associated factor 1; trimeric helix coiled coiled, acetylation, alternative splic apoptosis, coiled coil, cytoplasm; 2.80A {Homo sapiens}
Probab=75.50 E-value=23 Score=27.08 Aligned_cols=59 Identities=22% Similarity=0.179 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014879 343 KMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLLH 415 (416)
Q Consensus 343 Kk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~q 415 (416)
|-..+.+||.++..++.-...+...+..+.. .++++.+|..+-....+.|+..|.+|.|
T Consensus 4 ~~~~~~~le~kl~~lEnIv~~l~~eve~~~~--------------~lea~~rq~~~d~~~Ie~Le~kv~~l~~ 62 (65)
T 3m0d_C 4 KEKLLAELEGKLRVFENIVAVLNKEVEASHL--------------ALATSIHQSQLDRERILSLEQRVVELQQ 62 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH--------------HHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 3456777888887776655444333333332 3333334444444555556666665554
No 132
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=74.96 E-value=17 Score=34.22 Aligned_cols=52 Identities=17% Similarity=0.057 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLL 412 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~Evqr 412 (416)
-.||..|..+|..|+.++..|..||.+|+.=++.+ ..|.+.|.+.+......
T Consensus 114 LeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~---q~la~vi~~l~~~~~~~ 165 (209)
T 2wvr_A 114 LKENEKLHKEIEQKDNEIARLKKENKELAEVAEHV---QYMAELIERLNGEPLDN 165 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcCCccc
Confidence 35899999999999999999999999886443332 34444555444444433
No 133
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=74.78 E-value=22 Score=33.05 Aligned_cols=37 Identities=8% Similarity=0.071 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 343 KMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLT 379 (416)
Q Consensus 343 Kk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~ 379 (416)
-++.+..|..+++.|+.+.+.|.+|+..+......+.
T Consensus 137 ~~~~~~~L~~e~~~l~~~~~~l~~qlE~~v~~K~~~E 173 (213)
T 1ik9_A 137 NQAKNEHLQKENERLLRDWNDVQGRFEKAVSAKEALE 173 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666666666666666666555444433
No 134
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=74.22 E-value=13 Score=27.86 Aligned_cols=7 Identities=14% Similarity=-0.572 Sum_probs=2.9
Q ss_pred HHHHHHh
Q 014879 407 LFYYLLL 413 (416)
Q Consensus 407 ~~EvqrL 413 (416)
++||.+|
T Consensus 43 keele~L 49 (51)
T 3m91_A 43 REEVDRL 49 (51)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444443
No 135
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=74.01 E-value=15 Score=37.46 Aligned_cols=66 Identities=11% Similarity=0.223 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAA-RSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 324 KR~KRiLkNRESAr-RSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
+-+..+++.|+.-+ .--.+=.+|.++||+++..|+.....-...|..|+..+..+..+.+.|...|
T Consensus 91 ~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 91 KNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666665433 3334556889999999999998777666688888888887777777776555
No 136
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=74.00 E-value=7.5 Score=33.08 Aligned_cols=74 Identities=15% Similarity=0.229 Sum_probs=35.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 321 SDPKRAKRILANRQSAARSKERK--MRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQ 397 (416)
Q Consensus 321 ~DpKR~KRiLkNRESArRSReRK--k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaq 397 (416)
.++|=.|-|+.| |+---+|- .=.|+-|-.++..++.....+..++....+++..+......|+.++..|..+..
T Consensus 7 vEEKyrKAMVsn---AQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 7 VEEKYKKAMVSN---AQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp -CCTHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666 22211111 112344444555555555555555555555555555555555555555544433
No 137
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=73.96 E-value=30 Score=29.02 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 330 LANRQSAARSKERKMRYISELEQKVQTLQ---TEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 330 LkNRESArRSReRKk~YleELE~KVq~Lq---sENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
..|-.+|-..=..|+..|++|-..+..++ ..+.-|.+|+.....++..=..--..+..+.+.|.
T Consensus 8 ~~~L~~aEeaL~~kq~~id~lke~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~ 74 (94)
T 3jsv_C 8 RQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQ 74 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34455666666667788888877777776 66667888888888877665554444444444443
No 138
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=73.94 E-value=38 Score=29.80 Aligned_cols=74 Identities=15% Similarity=0.289 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 322 DPKRAKRILANRQSAARSKERKM---------------RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 322 DpKR~KRiLkNRESArRSReRKk---------------~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
+-.|.++.|-||.-+---|..-. .-.++..+|+..++.+......+....+..+..|..+...+-
T Consensus 35 E~eR~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~ 114 (147)
T 2b9c_A 35 ESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVT 114 (147)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778888877655543211 112333444444444444444444444444444444444444
Q ss_pred HHHHHHHHH
Q 014879 387 FRLQAMEQQ 395 (416)
Q Consensus 387 ~RLqaLEqQ 395 (416)
..|..|+.+
T Consensus 115 ~nlKsLE~~ 123 (147)
T 2b9c_A 115 NNLKSLEDK 123 (147)
T ss_dssp HHHHHHHHT
T ss_pred HHHHhhHHh
Confidence 444444433
No 139
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=73.87 E-value=6.2 Score=31.30 Aligned_cols=22 Identities=27% Similarity=0.362 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 370 ILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~RLqa 391 (416)
.|+.+...|..|+..|+.+++.
T Consensus 54 ~Lq~~~~~L~~e~~~L~~~~~~ 75 (82)
T 1am9_A 54 FLQHSNQKLKQENLSLRTAVHK 75 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555555555555444443
No 140
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=73.76 E-value=54 Score=30.00 Aligned_cols=89 Identities=8% Similarity=0.099 Sum_probs=51.2
Q ss_pred HHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHH
Q 014879 304 AELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISE--------------------LEQKVQTLQTEATT 363 (416)
Q Consensus 304 ~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~YleE--------------------LE~KVq~LqsENs~ 363 (416)
+++.|+++..+.+ + ..+-.+++++..-|.-..+-++-|..|+-+ |+.+...++.....
T Consensus 19 e~aek~~~~k~~~-l-e~ek~~l~~~e~~r~k~~~h~~~k~~qlre~~d~gtt~~~i~~m~~yI~llrErea~lEqkVae 96 (169)
T 3k29_A 19 DRAEKVVKEKRRL-L-ELEQEKLRERESERDKVKNHYMQKIRQLREQLDDGTTSDAILKMKAYIKVVAIQLSEEEEKVNK 96 (169)
T ss_dssp HHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666655442 1 124456778888888888888877765544 55555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
...++..-++.+..-..+.......+.+++.
T Consensus 97 q~e~Ve~e~q~Le~ar~el~qArke~eKfel 127 (169)
T 3k29_A 97 QKENVLAASKELERAEVELTKRRKEEEKTRL 127 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555444444444444444444433
No 141
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=72.49 E-value=25 Score=28.87 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 357 LQTEATTLSAQVTILQRDSAGLTSENNELKF 387 (416)
Q Consensus 357 LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~ 387 (416)
.-.||..|..++..++.+...|..||.+|+.
T Consensus 36 aL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~e 66 (83)
T 1wlq_A 36 ALKENEKLHKEIEQKDSEIARLRKENKDLAE 66 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3458999999999999999999999998853
No 142
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=71.92 E-value=39 Score=30.38 Aligned_cols=48 Identities=10% Similarity=0.160 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
.+..|+.++.....+...|..+++.-+........++..+...|+.|.
T Consensus 45 ~~~~l~~~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLT 92 (154)
T 2ocy_A 45 DYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 92 (154)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455577777778888888887777777777777777777777766653
No 143
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=71.59 E-value=22 Score=25.98 Aligned_cols=47 Identities=13% Similarity=0.061 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 342 RKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFR 388 (416)
Q Consensus 342 RKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~R 388 (416)
+...++.+++.++..+..+...+..++..+...+..+..+...++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~q 55 (60)
T 3htk_A 9 TLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQ 55 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455544555544444444444444444444444444444333
No 144
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=71.56 E-value=47 Score=28.76 Aligned_cols=6 Identities=33% Similarity=0.451 Sum_probs=2.1
Q ss_pred HHHHHH
Q 014879 380 SENNEL 385 (416)
Q Consensus 380 sEN~EL 385 (416)
.++.++
T Consensus 71 ~~lke~ 76 (155)
T 2oto_A 71 TKLKEL 76 (155)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 145
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=71.24 E-value=56 Score=29.26 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 329 ILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 329 iLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
+-.|..|--.+-.+=-+..+.+|.++..|+........+....++.+..|..+...|..+|..
T Consensus 54 v~~nlKsLE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~ 116 (155)
T 2efr_A 54 VTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYA 116 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444555566666666666666666666666666666666666666555543
No 146
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=70.81 E-value=5.6 Score=27.85 Aligned_cols=28 Identities=4% Similarity=0.198 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.+..||.||+.|-.++..|..++..|+.
T Consensus 2 RMnQledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 2 KLKQVADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3678899999888888888877776653
No 147
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=70.80 E-value=40 Score=27.22 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 361 ATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 361 Ns~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
...|..++..|+.++..|.-++.++.-+|+.|.
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~ 54 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVV 54 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 344555555555555555555555555555543
No 148
>1c94_A Retro-GCN4 leucine zipper; retro-coiled coil, 4-alpha-helix-bundle, peptide synthesis, gene regulation; 2.08A {Synthetic} SCOP: k.11.1.1
Probab=70.80 E-value=4.6 Score=28.34 Aligned_cols=30 Identities=13% Similarity=0.083 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014879 387 FRLQAMEQQAQLKDGINSFLLFYYLLLLHL 416 (416)
Q Consensus 387 ~RLqaLEqQaqLrdALnEaL~~EvqrL~ql 416 (416)
.+|.+.|...+....|.|..+.|+|.|+||
T Consensus 9 kklravenelhynkslleevkdelqkmrql 38 (38)
T 1c94_A 9 KKLRAVENELHYNKSLLEEVKDELQKMRQL 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 357778888888888999999999999997
No 149
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=70.51 E-value=20 Score=33.91 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 322 DPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 322 DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
++..+|+-|+.|-.+-++ .+..|+.+++..+.|++.+.+++....++...+...-..+
T Consensus 161 sde~Ik~yLa~R~~~lK~------kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~ 218 (228)
T 3q0x_A 161 NDSVVKQFLAFRLSEVKG------TCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKH 218 (228)
T ss_dssp CHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455677777777665543 4678899999999999999999988887777766665555
No 150
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=70.18 E-value=7.8 Score=30.43 Aligned_cols=28 Identities=21% Similarity=0.258 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
|..++..|+.+...|..+|..|+.+|++
T Consensus 52 L~~~~~~l~~e~~~L~~~~~~L~~~l~~ 79 (83)
T 1nkp_B 52 MRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444443
No 151
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=69.75 E-value=16 Score=29.10 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.+||.++..|+...+.+...|..|......-..+...|+.+|+.|.++
T Consensus 10 ~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~r 57 (78)
T 3efg_A 10 QELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLED 57 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888888888888888877777777777777777777655
No 152
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=69.71 E-value=16 Score=36.68 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
+.+.+|+.++..|+.+...+..++..+++++.....+-+.|.-+|+.|
T Consensus 10 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~el 57 (403)
T 4etp_A 10 EKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQEL 57 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344555555555555555555555555555555555555554445444
No 153
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=69.46 E-value=26 Score=36.33 Aligned_cols=9 Identities=11% Similarity=-0.175 Sum_probs=0.0
Q ss_pred CcccCCCCC
Q 014879 125 TQLIPIGSK 133 (416)
Q Consensus 125 p~~~~~~~~ 133 (416)
||+|+||+|
T Consensus 37 ~~~~~~~~~ 45 (464)
T 1m1j_B 37 APPISGTGY 45 (464)
T ss_dssp ---------
T ss_pred CCCcCCCCc
Confidence 334444444
No 154
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=68.82 E-value=32 Score=27.45 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE 381 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE 381 (416)
+|...|..|..|+..|..++..+++++..+..+
T Consensus 3 ~L~k~i~~l~~E~eel~~klk~~~ee~~~~~ee 35 (71)
T 1s1c_X 3 MLTKDIEILRRENEELTEKMKKAEEEYKLEKEE 35 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688899999999999999999999888877644
No 155
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=68.70 E-value=14 Score=29.80 Aligned_cols=29 Identities=21% Similarity=0.318 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
|..+...++.+...|..+|..|+.+|+.|
T Consensus 57 L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 57 VQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333334444444445555555555444
No 156
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=68.47 E-value=21 Score=28.22 Aligned_cols=21 Identities=24% Similarity=0.154 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 334 QSAARSKERKMRYISELEQKV 354 (416)
Q Consensus 334 ESArRSReRKk~YleELE~KV 354 (416)
.+-++-|.+=..++.+|..-|
T Consensus 12 ~~ErrRR~~in~~f~~L~~lv 32 (82)
T 1am9_A 12 AIEKRYRSSINDKIIELKDLV 32 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhc
Confidence 333333333344455554444
No 157
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=68.42 E-value=31 Score=27.56 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNE 384 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~E 384 (416)
|...|..|..|+..|..++..+++++..+..|-..
T Consensus 2 ~~k~v~~l~~E~eel~~klk~~~ee~~~~~eee~~ 36 (71)
T 1uix_A 2 STSDVANLANEKEELNNKLKEAQEQLSRLKDEEIS 36 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788889999999999999999888877755444
No 158
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=68.40 E-value=6.8 Score=30.05 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.+..|+.+...|..+|.+|+.++..|.++
T Consensus 31 ~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~ 59 (63)
T 2dgc_A 31 RMKQLEDKVEELLSKNYHLENEVARLKKL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555556666666666666555443
No 159
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=68.19 E-value=16 Score=30.06 Aligned_cols=31 Identities=26% Similarity=0.259 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 357 LQTEATTLSAQVTILQRDSAGLTSENNELKF 387 (416)
Q Consensus 357 LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~ 387 (416)
.-.||..|..+|..|+.++..|..+|.+|+.
T Consensus 44 aL~EN~~Lh~~ie~l~eEi~~lk~en~eL~e 74 (83)
T 1uii_A 44 ALKENEKLHKEIEQKDNEIARLKKENKELAE 74 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3458999999999999999999999888854
No 160
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=67.48 E-value=57 Score=31.12 Aligned_cols=80 Identities=19% Similarity=0.229 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 014879 333 RQSAARSKERKMRYISELEQKVQTLQTEAT-TLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA-QLKDGINSFLLFYY 410 (416)
Q Consensus 333 RESArRSReRKk~YleELE~KVq~LqsENs-~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa-qLrdALnEaL~~Ev 410 (416)
...|...+.|=..++++|-.++.-+-.+.. .|...+..|+...+ .-+..|.++++++.+.. -.-+.++.+|..++
T Consensus 164 ~~~a~~L~~~l~~~~eeLr~~L~p~ae~lr~~l~~~~e~l~~~l~---~~~~~~~qq~e~f~~~~~p~~e~~~~~l~~~~ 240 (273)
T 3s84_A 164 KKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLA---ELGGHLDQQVEEFRRRVEPYGENFNKALVQQM 240 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHH---HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 345666777777777777777665433221 12233334443333 33466777888886653 34457777777777
Q ss_pred HHhhc
Q 014879 411 LLLLH 415 (416)
Q Consensus 411 qrL~q 415 (416)
..|++
T Consensus 241 e~l~~ 245 (273)
T 3s84_A 241 EQLRQ 245 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 161
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=67.27 E-value=23 Score=33.30 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
|.=.|.+++.|+.+|..|..+++.|. ....+|..+-.++..+..+
T Consensus 67 VSL~erQ~~~LR~r~~~Le~~L~~Li----~~A~~Ne~l~~~~~~l~l~ 111 (252)
T 3e98_A 67 VSLVERQVRLLRERNIEMRHRLSQLM----DVARENDRLFDKTRRLVLD 111 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 45567777778888888877776654 4567777777777777655
No 162
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=67.08 E-value=23 Score=29.78 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
.+.+.+.++..|+.+...-..+-..++.+...+..|..+|-.-|
T Consensus 20 ~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 20 ELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASL 63 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556666666666666666666666777777777665443
No 163
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=66.92 E-value=48 Score=26.61 Aligned_cols=44 Identities=11% Similarity=0.136 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFR 388 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~R 388 (416)
..|..++.++..|+............|+..+..|..|.+.|..+
T Consensus 14 eEm~~~eeel~~lke~l~k~e~~rkele~~~~~l~~ek~~L~~q 57 (89)
T 3bas_A 14 EEMKEQLKQMDKMKEDLAKTERIKKELEEQNVTLLEQKNDLFGS 57 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555555555555555555555444
No 164
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=66.87 E-value=69 Score=40.47 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
++..++.+....+.+..+++.+|+.++.
T Consensus 2015 ~l~~ae~~l~~~~~~L~~~~~~L~~le~ 2042 (3245)
T 3vkg_A 2015 EVEQLENAANELKLKQDEIVATITALEK 2042 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444443
No 165
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=66.73 E-value=4.9 Score=29.65 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQV 368 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Ql 368 (416)
..|++.||.+|+.|+.+...|...+
T Consensus 43 ~~~~~~L~~ri~~Le~~l~~l~~~l 67 (70)
T 1zme_C 43 TKYLQQLQKDLNDKTEENNRLKALL 67 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999888887776654
No 166
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=66.54 E-value=9.9 Score=38.46 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 356 TLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 356 ~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
.+...+..|..++..|++++.-|..|+..|+.++..+
T Consensus 39 ~l~~~~~dl~~~lk~le~~~~~L~~e~e~l~~~~~~~ 75 (428)
T 4b4t_K 39 ALSNVNSDIYFKLKKLEKEYELLTLQEDYIKDEQRHL 75 (428)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555666666666666666666665554444
No 167
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=66.48 E-value=23 Score=28.32 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQV 368 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Ql 368 (416)
|.+||.+++....+...|..++
T Consensus 42 I~eLEk~L~ekd~eI~~LqseL 63 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNEL 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444443333
No 168
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=66.33 E-value=5 Score=32.11 Aligned_cols=47 Identities=23% Similarity=0.247 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
++|..++..++..+..|..=+..-+..+..|+.+|+-||..|..+|.
T Consensus 18 eel~~~L~~~~k~~~Hl~~LL~EsEatnarL~eq~~lLK~EIRRlER 64 (71)
T 3bbp_D 18 EELVQKLSSTTKSADHLNGLLRETEATNAILMEQIKLLKSEIRRLER 64 (71)
T ss_dssp -----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHh
Confidence 45555555556666666666666666677777777777776666653
No 169
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=66.19 E-value=0.062 Score=44.78 Aligned_cols=46 Identities=17% Similarity=0.311 Sum_probs=37.7
Q ss_pred ccChHHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 300 EFNDAELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMR 345 (416)
Q Consensus 300 ~~s~~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~ 345 (416)
..+-+|.+..++.-.|.+--+.--+.+||.-+||.+|+++|+||..
T Consensus 42 nLpv~eFn~lL~~~~Lt~~Ql~lIrdiRRRgKNkvAAqnCRKRKld 87 (90)
T 2lz1_A 42 NLPVVDFNEMMSKEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLE 87 (90)
T ss_dssp HSCHHHHHHHHHHSCCCHHHHHHHHHHHHHSCSCCCCCCCSCCCCS
T ss_pred HCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhhhHHHHHHcchhhcc
Confidence 4456777888888877777666778999999999999999999864
No 170
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=66.11 E-value=26 Score=36.30 Aligned_cols=17 Identities=6% Similarity=0.278 Sum_probs=10.5
Q ss_pred HHH-HHHHHHHHHHHHHH
Q 014879 379 TSE-NNELKFRLQAMEQQ 395 (416)
Q Consensus 379 ~sE-N~ELK~RLqaLEqQ 395 (416)
..| -++|+.+|..++.+
T Consensus 109 ~~~~~~~l~~~i~~le~~ 126 (484)
T 3lss_A 109 LKQLSKDLSDQVAGLAKE 126 (484)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455 66666666666654
No 171
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=66.04 E-value=8.7 Score=28.69 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
.+..|+.++..|..||..|+.++..|.+
T Consensus 23 ~~~~LE~~v~~L~~eN~~L~~~~~~L~~ 50 (55)
T 1dh3_A 23 YVKSLENRVAVLENQNKTLIEELKALKD 50 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666777777777777766643
No 172
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=65.86 E-value=29 Score=27.81 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 389 LQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 389 LqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
|..++.+.+-+|++...|+.|+.++
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444444444444444444443
No 173
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=65.29 E-value=6.4 Score=31.96 Aligned_cols=25 Identities=32% Similarity=0.357 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 362 TTLSAQVTILQRDSAGLTSENNELK 386 (416)
Q Consensus 362 s~Ls~Qlt~Lqre~~~L~sEN~ELK 386 (416)
..|+.+|..|..++..|..||.-||
T Consensus 18 evLKe~I~EL~e~~~qLE~EN~~Lk 42 (78)
T 1dip_A 18 EILKEQIRELVEKNSQLERENTLLK 42 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555555555554
No 174
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=64.82 E-value=36 Score=28.83 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
....|..|..|+.++.+|..++...+.-...+..+|..|
T Consensus 13 ~~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~l 51 (125)
T 1joc_A 13 CLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSL 51 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 344555666666666666666655444444444444444
No 175
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=64.74 E-value=6.4 Score=29.53 Aligned_cols=26 Identities=19% Similarity=0.404 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTIL 371 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~L 371 (416)
+++++...++.|..||..|..++..|
T Consensus 28 FLd~v~~~~~~l~~e~~~L~~~~~~l 53 (57)
T 2wuj_A 28 FLAQVRKDYEIVLRKKTELEAKVNEL 53 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444433
No 176
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=64.49 E-value=13 Score=29.48 Aligned_cols=27 Identities=22% Similarity=0.182 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
|..+...++.+...|..||.+|+.+|+
T Consensus 52 L~~~~~~l~~e~~~L~~e~~~L~~~L~ 78 (80)
T 1nlw_A 52 LEDSDRKAVHQIDQLQREQRHLKRQLE 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444444455555544443
No 177
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=64.32 E-value=3.6 Score=35.40 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVT 369 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt 369 (416)
-+++|+.+++.|+.||..|+.++.
T Consensus 9 t~EeLaaeL~kLqmENK~LKkkl~ 32 (110)
T 2oa5_A 9 TYEEMVKEVERLKLENKTLKQKVK 32 (110)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999886
No 178
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=64.23 E-value=27 Score=25.52 Aligned_cols=26 Identities=27% Similarity=0.394 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
++..|+.+.+.|......||.+||+|
T Consensus 21 elaaleselqalekklaalksklqal 46 (48)
T 1g6u_A 21 ELAALESELQALEKKLAALKSKLQAL 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45555555555555555566666554
No 179
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=63.74 E-value=23 Score=35.65 Aligned_cols=44 Identities=23% Similarity=0.481 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 352 QKVQTLQTEATTLSAQVTILQ---RDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 352 ~KVq~LqsENs~Ls~Qlt~Lq---re~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.+++.|+.+.+.++.++..+. .+...|..+-++|+.+|..++.+
T Consensus 44 ~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 90 (425)
T 2dq3_A 44 KRLEALRSERNKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEEE 90 (425)
T ss_dssp HHHHHHHHHHHHHHHHTTGGGSSCSCTTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444321 11235566777777777777654
No 180
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=63.20 E-value=1.2e+02 Score=30.96 Aligned_cols=12 Identities=17% Similarity=-0.288 Sum_probs=6.1
Q ss_pred HHHHHHHHHHhh
Q 014879 403 NSFLLFYYLLLL 414 (416)
Q Consensus 403 nEaL~~EvqrL~ 414 (416)
.+.+..|||||+
T Consensus 143 l~~q~~kiqRLE 154 (390)
T 1deq_A 143 VRDQLVDMKRLE 154 (390)
T ss_pred HHHHHHHHHHHH
Confidence 344455555554
No 181
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=62.88 E-value=49 Score=25.30 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHH
Q 014879 379 TSENNELKFRLQAM 392 (416)
Q Consensus 379 ~sEN~ELK~RLqaL 392 (416)
..|..+|+.+||.|
T Consensus 55 k~Ei~elrr~iq~L 68 (77)
T 3trt_A 55 KQESTEYRRQVQSL 68 (77)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444444
No 182
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.50 E-value=7.3 Score=39.55 Aligned_cols=9 Identities=0% Similarity=-0.658 Sum_probs=3.8
Q ss_pred HHHHHHhhc
Q 014879 407 LFYYLLLLH 415 (416)
Q Consensus 407 ~~EvqrL~q 415 (416)
++|++++++
T Consensus 66 ~~~i~~~~~ 74 (434)
T 4b4t_M 66 KEKIKNNRQ 74 (434)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhccC
Confidence 344444433
No 183
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=62.40 E-value=6.1 Score=32.07 Aligned_cols=23 Identities=35% Similarity=0.355 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSA 366 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~ 366 (416)
|..|.||+.++..|+.||+-|+.
T Consensus 21 Ke~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 21 KEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577888888888888877754
No 184
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=62.13 E-value=64 Score=26.38 Aligned_cols=57 Identities=14% Similarity=0.232 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 332 NRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 332 NRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
|-+||-.+--|-|+-|.+ ++......|..+..++...+.++..|..|...|+.++..
T Consensus 14 eLQSALeaEIqAKQ~i~E---ELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 14 ELQEALEEEVLTRQSLSR---EMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666555554332 333444455555555555555555555555555544444
No 185
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=61.98 E-value=1.5e+02 Score=30.67 Aligned_cols=12 Identities=25% Similarity=0.517 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q 014879 383 NELKFRLQAMEQ 394 (416)
Q Consensus 383 ~ELK~RLqaLEq 394 (416)
..|+.+|+.|+.
T Consensus 178 ~~l~~ki~~l~~ 189 (464)
T 1m1j_B 178 DSLHKKIQKLEN 189 (464)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 334444444433
No 186
>3m0d_C TNF receptor-associated factor 1; trimeric helix coiled coiled, acetylation, alternative splic apoptosis, coiled coil, cytoplasm; 2.80A {Homo sapiens}
Probab=61.81 E-value=51 Score=25.13 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
+..+|.-|..+-.+...+..++..+.++
T Consensus 15 l~~lEnIv~~l~~eve~~~~~lea~~rq 42 (65)
T 3m0d_C 15 LRVFENIVAVLNKEVEASHLALATSIHQ 42 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3456666666655666666666665443
No 187
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=61.72 E-value=74 Score=27.00 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
++++|..+..++.|+......+..+.+.+..|..+...|+.+|
T Consensus 39 LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L 81 (103)
T 4h22_A 39 LLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEAL 81 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555555555555555555554443
No 188
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=61.49 E-value=67 Score=26.38 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 377 GLTSENNELKFRLQAME 393 (416)
Q Consensus 377 ~L~sEN~ELK~RLqaLE 393 (416)
.|..+...++.+|..|+
T Consensus 62 ~le~~i~rhk~~i~~l~ 78 (84)
T 1gmj_A 62 RLQKEIERHKQSIKKLK 78 (84)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 33344444455555544
No 189
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=61.48 E-value=57 Score=25.57 Aligned_cols=50 Identities=18% Similarity=0.166 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
|..|+............+..++.........+..+...|+.+++.||.+.
T Consensus 8 m~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~el 57 (81)
T 1ic2_A 8 MQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDEL 57 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 34455555555666666666666667777777777777777777777653
No 190
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=61.14 E-value=17 Score=29.95 Aligned_cols=13 Identities=15% Similarity=0.090 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHH
Q 014879 374 DSAGLTSENNELK 386 (416)
Q Consensus 374 e~~~L~sEN~ELK 386 (416)
....|..+...++
T Consensus 45 ~i~~lE~eL~~~r 57 (95)
T 3mov_A 45 MLTDKEREMAEIR 57 (95)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333334433333
No 191
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=60.99 E-value=36 Score=27.75 Aligned_cols=26 Identities=15% Similarity=0.285 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 366 AQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 366 ~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
..|..|+++...+..++..|..++..
T Consensus 56 ~~i~~Lr~~i~~~~~ek~~l~~e~dn 81 (93)
T 3s4r_A 56 EEMRELRRQVDQLTNDKARVEVERDN 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555444444
No 192
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=60.90 E-value=46 Score=28.33 Aligned_cols=36 Identities=11% Similarity=0.165 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
|...+...+.+...|..+++.|......|..|-.-.
T Consensus 9 l~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFY 44 (106)
T 4e61_A 9 IQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFY 44 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444455555555555555554444
No 193
>3m0a_A TNF receptor-associated factor 2; TRAF2: CIAP2 and the TRAF1: TRAF2: CIAP2 complexes, apoptosi coil, cytoplasm, metal-binding; 2.61A {Homo sapiens} PDB: 3m0d_A 3m06_A
Probab=60.03 E-value=52 Score=24.62 Aligned_cols=48 Identities=15% Similarity=0.206 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
+..||.++..++.-...+...+..+.-....+..++...+..+..|++
T Consensus 7 ~~~le~k~~~~e~iv~~l~~~v~~~~~~le~~~~q~~~~~~~i~~Le~ 54 (66)
T 3m0a_A 7 CESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSS 54 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHHhHHHHHHH
Confidence 334455555555544444444444444444444444443334444443
No 194
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=59.50 E-value=77 Score=33.18 Aligned_cols=62 Identities=21% Similarity=0.202 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAA-RSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 324 KR~KRiLkNRESAr-RSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+-+..+|+.|+.-+ .--.+=.+|.++||.++..|+.....-...|..||..+..+..+.+.|
T Consensus 89 ~~~~~~lk~~~~q~~dndn~~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRL 151 (491)
T 1m1j_A 89 VETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRL 151 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555333 333344567777888777777655443366666655555444443333
No 195
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=59.00 E-value=16 Score=29.66 Aligned_cols=37 Identities=27% Similarity=0.402 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+|-.+|..|..|+..|..++..+++-.+.+...+.+|
T Consensus 34 DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~el 70 (77)
T 2w83_C 34 DLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNREL 70 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555554444444444443333
No 196
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=58.96 E-value=29 Score=34.96 Aligned_cols=45 Identities=16% Similarity=0.151 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
.+|+.+++.|+.++..+.+++..+.+++.....+.+.|.-.|+.|
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l 57 (412)
T 3u06_A 13 VHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDL 57 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333344444444444444444444444444444444444444443
No 197
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=58.92 E-value=20 Score=35.35 Aligned_cols=23 Identities=22% Similarity=0.076 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTIL 371 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~L 371 (416)
.||..|...+.+...|..++..+
T Consensus 16 ~~e~~i~~~~~~i~~L~~~l~~~ 38 (323)
T 1lwu_C 16 ILEQIGVSHDAQIQELSEMWRVN 38 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcHHHHHHHHHHHHHHH
Confidence 34444444444444444444333
No 198
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=58.83 E-value=24 Score=26.18 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 362 TTLSAQVTILQRDSAGL 378 (416)
Q Consensus 362 s~Ls~Qlt~Lqre~~~L 378 (416)
..|+.++..|..++..|
T Consensus 6 aylrkkiarlkkdnlql 22 (52)
T 3he5_B 6 AYLRKKIARLKKDNLQL 22 (52)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhhh
Confidence 33444444444333333
No 199
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.81 E-value=23 Score=30.16 Aligned_cols=31 Identities=29% Similarity=0.394 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 362 TTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 362 s~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
..|+.+|..++..+..|..+-.+.-.+|..+
T Consensus 47 ~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~~ 77 (130)
T 2dnx_A 47 SKLQENLQQLQHSTNQLAKETNELLKELGSL 77 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344444444444444444444444444443
No 200
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=58.80 E-value=23 Score=34.03 Aligned_cols=50 Identities=18% Similarity=0.323 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
.-|.|+..|++.|+..-..+..+|+.|+++=..|..+...++.|+..++.
T Consensus 177 sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief~qE 226 (242)
T 3uux_B 177 SEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLEE 226 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35888999999999999999999999999999999999999999887754
No 201
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=58.62 E-value=40 Score=31.96 Aligned_cols=53 Identities=19% Similarity=0.162 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 014879 357 LQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ-AQLKDGINSFLLFYY 410 (416)
Q Consensus 357 LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ-aqLrdALnEaL~~Ev 410 (416)
|......+++++..|++..+.+..|++.+...|....++ +++| ...+.+--||
T Consensus 169 La~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~ 222 (228)
T 3q0x_A 169 LAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLR-EQYDKHLLEV 222 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhheee
Confidence 334444555555555555556666666666666555554 4555 3344444444
No 202
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=57.84 E-value=8.7 Score=28.80 Aligned_cols=26 Identities=12% Similarity=0.330 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 370 ILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.+..++..|..||.+|+.+++.++.+
T Consensus 31 ~v~~~~~~l~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 31 QVRKDYEIVLRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34567777888888888888877653
No 203
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=57.14 E-value=91 Score=26.55 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=18.4
Q ss_pred ccChHHHHhhhhhhhHhhhhccCHHHHHHHHHH
Q 014879 300 EFNDAELKKIWANEKLAEIALSDPKRAKRILAN 332 (416)
Q Consensus 300 ~~s~~e~kKi~~~~~LaElAl~DpKR~KRiLkN 332 (416)
.|+..++..+.-=-.|.++- .--+.+|+++..
T Consensus 40 ~Y~~~dl~~l~~I~~lr~~G-~sL~eIk~~l~~ 71 (142)
T 3gp4_A 40 KFGAEDLRWILFTRQMRRAG-LSIEALIDYLAL 71 (142)
T ss_dssp CBCHHHHHHHHHHHHHHHTT-CCHHHHHHHHHH
T ss_pred eeCHHHHHHHHHHHHHHHcC-CCHHHHHHHHHH
Confidence 46677776665555555443 244556666654
No 204
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=57.02 E-value=1.2e+02 Score=27.80 Aligned_cols=74 Identities=8% Similarity=0.093 Sum_probs=41.2
Q ss_pred ccChHHHHhhhhhh--hHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 300 EFNDAELKKIWANE--KLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAG 377 (416)
Q Consensus 300 ~~s~~e~kKi~~~~--~LaElAl~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~ 377 (416)
..|..|++.++.++ .|..++..- .-++-+...++.. +-..+.+.+|+.++..+......+..+++.|+.++..
T Consensus 37 ~LS~~eL~~LL~~~~dlL~~~v~~l-~~~q~~~~~~e~l----~s~ae~ll~l~~~Le~~r~~l~~~l~~~~~L~~~~~~ 111 (192)
T 2p22_C 37 LLSSKEIIDLIQTHRHQLELYVTKF-NPLTDFAGKIHAF----RDQFKQLEENFEDLHEQKDKVQALLENARILESKYVA 111 (192)
T ss_dssp SCTTHHHHHHHHHCHHHHHHHGGGG-SCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHhChHHHHHHHHHhc-hhHHHHHHHHHHH----HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888888875 445454211 1234444444444 3334444566666666666666666666666666643
Q ss_pred H
Q 014879 378 L 378 (416)
Q Consensus 378 L 378 (416)
.
T Consensus 112 k 112 (192)
T 2p22_C 112 S 112 (192)
T ss_dssp H
T ss_pred H
Confidence 3
No 205
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=56.57 E-value=36 Score=33.61 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 354 VQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 354 Vq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
++.|..|..+|...|.....+...|......++.+|+.|+
T Consensus 7 ~~~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~ 46 (323)
T 1lwu_C 7 VQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQ 46 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333334444344444444443
No 206
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=56.51 E-value=55 Score=23.84 Aligned_cols=48 Identities=10% Similarity=0.130 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
+..|+..+..+..+...+...+..+...+..+....+..+..|..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~ 54 (60)
T 3htk_A 7 KKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKN 54 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666666666666666666666666666666543
No 207
>3m0a_A TNF receptor-associated factor 2; TRAF2: CIAP2 and the TRAF1: TRAF2: CIAP2 complexes, apoptosi coil, cytoplasm, metal-binding; 2.61A {Homo sapiens} PDB: 3m0d_A 3m06_A
Probab=56.35 E-value=60 Score=24.25 Aligned_cols=51 Identities=14% Similarity=0.052 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014879 365 SAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLLH 415 (416)
Q Consensus 365 s~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~q 415 (416)
..++..++.-...+..+-..+..++.++.++-.+-....+.|+..+.+|.+
T Consensus 11 e~k~~~~e~iv~~l~~~v~~~~~~le~~~~q~~~~~~~i~~Le~k~~~l~~ 61 (66)
T 3m0a_A 11 EKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLER 61 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHHhHHHHHHHHHHHHHH
Confidence 444444454444454455555556666666666666666777777766654
No 208
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=55.72 E-value=15 Score=24.73 Aligned_cols=15 Identities=33% Similarity=0.587 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHH
Q 014879 377 GLTSENNELKFRLQA 391 (416)
Q Consensus 377 ~L~sEN~ELK~RLqa 391 (416)
.|..||+.||.+++.
T Consensus 10 sleaenkqlkakvee 24 (31)
T 1p9i_A 10 SLEAENKQLKAKVEE 24 (31)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 209
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=55.42 E-value=23 Score=26.51 Aligned_cols=22 Identities=27% Similarity=0.282 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 373 RDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 373 re~~~L~sEN~ELK~RLqaLEq 394 (416)
++...|..-|..|-.+++.|+.
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~ 25 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEF 25 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555566556665543
No 210
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=55.19 E-value=6.3 Score=29.36 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLS 365 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls 365 (416)
..|+++||.+|+.|+.....|.
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l~ 69 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNLT 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999998887665543
No 211
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=55.11 E-value=39 Score=25.05 Aligned_cols=6 Identities=17% Similarity=0.434 Sum_probs=2.1
Q ss_pred HHHHHH
Q 014879 356 TLQTEA 361 (416)
Q Consensus 356 ~LqsEN 361 (416)
.|...|
T Consensus 14 rlkkdn 19 (52)
T 3he5_B 14 RLKKDN 19 (52)
T ss_dssp HHHHHH
T ss_pred HHhhhh
Confidence 333333
No 212
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=54.51 E-value=44 Score=26.82 Aligned_cols=19 Identities=11% Similarity=0.258 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014879 339 SKERKMRYISELEQKVQTL 357 (416)
Q Consensus 339 SReRKk~YleELE~KVq~L 357 (416)
.+..+...+.+++.-...|
T Consensus 28 q~~~l~~~~~e~~~~~~eL 46 (117)
T 2zqm_A 28 QKQKVQLELTEAKKALDEI 46 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444443
No 213
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=54.15 E-value=21 Score=36.11 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFR 388 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~R 388 (416)
.+|..+++.|+.+...|..|...++.+...+..|...++.+
T Consensus 45 ~dl~~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee 85 (428)
T 4b4t_K 45 SDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEE 85 (428)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555444444444444443333333
No 214
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=53.18 E-value=29 Score=27.86 Aligned_cols=48 Identities=19% Similarity=0.332 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
-|.|+..|++.|..--.-+..+++.|+++-..|..+...++.||..++
T Consensus 22 EI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~q 69 (72)
T 2xu6_A 22 EIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLE 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777777777777777777777777766665543
No 215
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=53.16 E-value=18 Score=35.06 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSEN 382 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN 382 (416)
+.+++.|+.++..|..+++.|+++...+...|
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~n 215 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKAN 215 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 44566666666666666666665555555443
No 216
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=53.04 E-value=12 Score=29.27 Aligned_cols=10 Identities=20% Similarity=0.255 Sum_probs=4.6
Q ss_pred HHHHHHHHHH
Q 014879 345 RYISELEQKV 354 (416)
Q Consensus 345 ~YleELE~KV 354 (416)
..+.+|..-|
T Consensus 29 ~~f~~Lr~lv 38 (80)
T 1hlo_A 29 DSFHSLRDSV 38 (80)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHC
Confidence 3445554443
No 217
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=52.97 E-value=45 Score=27.73 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQ 372 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lq 372 (416)
.|+..++.|+.....+..+++.++
T Consensus 99 ~l~~~~~~l~~~l~~l~~~i~~~~ 122 (133)
T 1fxk_C 99 ELESTLQKMGENLRAITDIMMKLS 122 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433
No 218
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=52.75 E-value=1.4e+02 Score=30.55 Aligned_cols=15 Identities=13% Similarity=-0.321 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHhh
Q 014879 400 DGINSFLLFYYLLLL 414 (416)
Q Consensus 400 dALnEaL~~EvqrL~ 414 (416)
+.+...|+.-|++|+
T Consensus 118 ~~~i~~L~~~v~~l~ 132 (411)
T 3ghg_C 118 NQKIVNLKEKVAQLE 132 (411)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444555555554
No 219
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=52.70 E-value=28 Score=23.74 Aligned_cols=26 Identities=35% Similarity=0.534 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 369 TILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 369 t~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
..|.++...|..|...||..+.+|.|
T Consensus 5 aalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 5 AALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34444444455555555555555543
No 220
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=52.68 E-value=78 Score=25.01 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 340 KERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSEN 382 (416)
Q Consensus 340 ReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN 382 (416)
|+..+.-|..||..++.++.+.+....+...|-.-...|..|.
T Consensus 7 ~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EI 49 (74)
T 2xv5_A 7 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEI 49 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555555444444444333333333333333
No 221
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=52.34 E-value=10 Score=39.71 Aligned_cols=16 Identities=19% Similarity=0.426 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATT 363 (416)
Q Consensus 348 eELE~KVq~LqsENs~ 363 (416)
.+|+.++..++.+...
T Consensus 338 ~~~~~~~~~~~~~~~~ 353 (575)
T 2i1j_A 338 QEYQDRLRQMQEEMER 353 (575)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555555555554444
No 222
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=52.20 E-value=36 Score=23.63 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 362 TTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 362 s~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
..|.+++..|.+++.+|+-.-..||+++.+|
T Consensus 4 salkekvsalkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 4 SALKEKVSALKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466677777777888888888888887765
No 223
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=51.83 E-value=96 Score=25.97 Aligned_cols=24 Identities=25% Similarity=0.141 Sum_probs=14.7
Q ss_pred cccChHHHHhhhhhhhHhhhhccCH
Q 014879 299 GEFNDAELKKIWANEKLAEIALSDP 323 (416)
Q Consensus 299 g~~s~~e~kKi~~~~~LaElAl~Dp 323 (416)
.+|.. |++.+...=..++.|+.+.
T Consensus 25 ~~~ap-El~~A~dKl~~A~~Am~~~ 48 (98)
T 4fm3_A 25 TDDVA-ELKLAQDKYAAAQIAMTAE 48 (98)
T ss_dssp CTTSH-HHHHHHHHHHHHHHHHHTT
T ss_pred ccccH-HHHHHHHHHHHHHHHHHcc
Confidence 35554 6777666666666666554
No 224
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=51.76 E-value=1.3e+02 Score=26.87 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 369 TILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYY 410 (416)
Q Consensus 369 t~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~Ev 410 (416)
..+..++..+..++.+|...++.|+.+.||-+|...-|+.++
T Consensus 83 k~~ea~la~l~~~~~~LeAE~aKLeEekQIseASRqgLrRDL 124 (146)
T 2xnx_M 83 GNAKLELDQLSSEKEQLTIEKAKLEEEKQISDASRQSLRRDL 124 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTTTC-----------
T ss_pred HhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 344455555555556666666777666666666555555443
No 225
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=51.50 E-value=18 Score=27.82 Aligned_cols=21 Identities=24% Similarity=0.224 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 375 SAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 375 ~~~L~sEN~ELK~RLqaLEqQ 395 (416)
...|...|-.|-.+++.||.+
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~ 33 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFS 33 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444
No 226
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=51.44 E-value=49 Score=31.13 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 354 VQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 354 Vq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
+|+|+.+.-........|+..+..+.+|++.|+.+|+.|+..
T Consensus 32 ~~~~~a~~~s~~s~~~dl~~s~~~l~ae~~~L~~~l~kLeGn 73 (206)
T 3oa7_A 32 LQQLRVNYGSFVSEYNDLTKSHNTLSKELDNLRSRFGNLEGN 73 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHccCC
Confidence 344455555555566666677777889999999999988753
No 227
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=50.30 E-value=61 Score=24.28 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 352 QKVQTLQTEATTLSAQVTILQRDSAGLTS 380 (416)
Q Consensus 352 ~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s 380 (416)
.|+..|..+.++|..++..|+.+...|..
T Consensus 4 aki~~Lss~V~~L~~kVdqLssdV~al~~ 32 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASNDANAARS 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666666555554444
No 228
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=50.20 E-value=44 Score=25.05 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
.++..++..|+.+...++..++...++++.|+.-.-.|...|.+
T Consensus 3 ~~~q~~i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIat 46 (59)
T 1gk6_A 3 KQLEDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIAT 46 (59)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34556666666666666666666666666666655555444433
No 229
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=50.20 E-value=38 Score=28.96 Aligned_cols=26 Identities=19% Similarity=0.088 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 363 TLSAQVTILQRDSAGLTSENNELKFR 388 (416)
Q Consensus 363 ~Ls~Qlt~Lqre~~~L~sEN~ELK~R 388 (416)
.|..++..|+.++..|..|..+|+.+
T Consensus 29 ~l~~~v~~l~~e~k~l~ke~~~l~~~ 54 (171)
T 2zvf_A 29 KLPKTVERFFEEWKDQRKEIERLKSV 54 (171)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444333
No 230
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=48.95 E-value=1e+02 Score=24.71 Aligned_cols=11 Identities=27% Similarity=0.625 Sum_probs=4.6
Q ss_pred HHHHHHHHHHH
Q 014879 347 ISELEQKVQTL 357 (416)
Q Consensus 347 leELE~KVq~L 357 (416)
+.+|+..+..|
T Consensus 33 i~~l~~~l~~l 43 (112)
T 1l8d_A 33 IGDLKTAIEEL 43 (112)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 34444444443
No 231
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=48.37 E-value=1.2e+02 Score=25.50 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHH----H--HH-HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 334 QSAARSKERKMRYISE----L--EQ-KVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 334 ESArRSReRKk~YleE----L--E~-KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
-..+..++.|++||.+ | .. -.+.|+.-+.+|..+|..|+.+.
T Consensus 17 ~k~q~e~EeKkkiLaER~~pL~id~l~~~~L~e~~keLh~~I~~lEeEK 65 (107)
T 1ytz_T 17 GKKQTARETKKKVLAERRKPLNIDHLNEDKLRDKAKELWDWLYQLQTEK 65 (107)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCSSSCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455667777775 1 11 12345555556666665555443
No 232
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=48.26 E-value=1.1e+02 Score=31.56 Aligned_cols=8 Identities=13% Similarity=-0.562 Sum_probs=3.3
Q ss_pred HHHHHHHH
Q 014879 404 SFLLFYYL 411 (416)
Q Consensus 404 EaL~~Evq 411 (416)
..+.+|++
T Consensus 128 ~~~~~~~~ 135 (484)
T 3lss_A 128 QQLEEERD 135 (484)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444443
No 233
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=47.79 E-value=99 Score=26.08 Aligned_cols=28 Identities=32% Similarity=0.328 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+.|...|..++..|++.+.....-..+|
T Consensus 17 e~e~~~l~~~~~el~~~l~~~~~~~~e~ 44 (125)
T 1joc_A 17 EGEIEKLQTKVLELQRKLDNTTAAVQEL 44 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555554444443333333
No 234
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=47.70 E-value=1.6e+02 Score=26.49 Aligned_cols=11 Identities=27% Similarity=0.425 Sum_probs=5.3
Q ss_pred HHHHHHHHHHH
Q 014879 382 NNELKFRLQAM 392 (416)
Q Consensus 382 N~ELK~RLqaL 392 (416)
|..|+..|..+
T Consensus 199 n~~L~~eLp~l 209 (251)
T 2fic_A 199 NVDLQEELPSL 209 (251)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44554444444
No 235
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=47.43 E-value=81 Score=25.29 Aligned_cols=53 Identities=8% Similarity=0.103 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLK 399 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLr 399 (416)
-.+..+..-+..+......=...-+.++.++..|...-.++ -|..++.+.++.
T Consensus 21 ~e~dn~~~~~edfk~KyE~E~~~R~~~E~d~~~LrkdvD~a--~l~r~dLE~kve 73 (86)
T 3swk_A 21 VERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNA--SLARLDLERKVE 73 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHHH
Confidence 33344444444444333333333444555555555555554 333333344333
No 236
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=47.34 E-value=83 Score=26.33 Aligned_cols=24 Identities=21% Similarity=0.234 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 335 SAARSKERKMRYISELEQKVQTLQ 358 (416)
Q Consensus 335 SArRSReRKk~YleELE~KVq~Lq 358 (416)
.++.+..=.-++..+|+.+|..++
T Consensus 19 ~~~q~~~e~e~~k~eL~~~~~~~~ 42 (107)
T 2no2_A 19 MARQAQVDLEREKKELEDSLERIS 42 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455555555555544
No 237
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=46.54 E-value=84 Score=26.04 Aligned_cols=38 Identities=11% Similarity=0.239 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+.|+.+++.|+.....|..++..++.+...+..+.+++
T Consensus 91 ~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~ 128 (133)
T 1fxk_C 91 ESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666555555555555544444443333
No 238
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=45.93 E-value=57 Score=23.76 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 363 TLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 363 ~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
.|.+++..+-++++....+..+|+.++..||..
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee~ 38 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLEEE 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555556666666666666666666666543
No 239
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=44.90 E-value=1.2e+02 Score=25.69 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 357 LQTEATTLSAQVTILQR 373 (416)
Q Consensus 357 LqsENs~Ls~Qlt~Lqr 373 (416)
|+.+.+.|..++..|++
T Consensus 23 L~~ei~eLk~~ve~lEk 39 (106)
T 4e61_A 23 LNEEIEQYKGTVSTLEI 39 (106)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 240
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=44.89 E-value=1.2e+02 Score=24.99 Aligned_cols=52 Identities=17% Similarity=0.269 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEA----TTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 344 k~YleELE~KVq~LqsEN----s~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQ 395 (416)
++.|++||..|..+.... +.|..-+..+-+-+..|...-.+|-.+++.+..+
T Consensus 25 r~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~FiaLAa~l~~lH~~V~~~Ke~ 80 (93)
T 3t98_B 25 RQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQ 80 (93)
T ss_dssp HHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777766654311 2355555555555555666555555555555443
No 241
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=44.86 E-value=72 Score=28.16 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014879 384 ELKFRLQAMEQQAQLKDGINSFLLFYYLLLLHL 416 (416)
Q Consensus 384 ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ql 416 (416)
.++.|...|+.|..=++.+.+.++.+++.|.++
T Consensus 100 ~~e~r~~~L~~ql~e~e~ll~~lq~QL~~LK~v 132 (135)
T 2e7s_A 100 AIEILNKRLTEQLREKDMLLDTLTLQLKNLKKV 132 (135)
T ss_dssp HHHHHHHHHHHTTTHHHHCC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666555667778888888887763
No 242
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=44.66 E-value=1.6e+02 Score=25.67 Aligned_cols=22 Identities=27% Similarity=0.348 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 372 QRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 372 qre~~~L~sEN~ELK~RLqaLE 393 (416)
+.+...|.-|+..|+++|+..+
T Consensus 70 q~~vqeLqgEI~~Lnq~Lq~a~ 91 (121)
T 3mq7_A 70 QKKVEELEGEITTLNHKLQDAS 91 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555566666666665544
No 243
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=44.35 E-value=2.2e+02 Score=28.50 Aligned_cols=13 Identities=23% Similarity=0.253 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHHH
Q 014879 379 TSENNELKFRLQA 391 (416)
Q Consensus 379 ~sEN~ELK~RLqa 391 (416)
..+.++|+.++..
T Consensus 77 ~~~~~~~~~~~~~ 89 (421)
T 1ses_A 77 GEEAKRLEEALRE 89 (421)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 244
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=43.88 E-value=57 Score=25.82 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014879 339 SKERKMRYISELEQKVQTL 357 (416)
Q Consensus 339 SReRKk~YleELE~KVq~L 357 (416)
.+..+...+.+++.-...|
T Consensus 23 q~~~l~~~~~e~~~~~~EL 41 (107)
T 1fxk_A 23 QKQTVEMQINETQKALEEL 41 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333344444444433333
No 245
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=43.87 E-value=47 Score=30.58 Aligned_cols=11 Identities=45% Similarity=0.637 Sum_probs=0.4
Q ss_pred CCCCCCCCCCC
Q 014879 97 SENLPPRRGHR 107 (416)
Q Consensus 97 ~~~lpprk~Hr 107 (416)
..+|-||..|.
T Consensus 11 ~~~~~~~~~~m 21 (184)
T 3w03_C 11 SSGLVPRGSHM 21 (184)
T ss_dssp ----------C
T ss_pred ccCcccCCCcc
Confidence 45678887653
No 246
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=43.52 E-value=1.7e+02 Score=27.84 Aligned_cols=59 Identities=19% Similarity=0.294 Sum_probs=30.7
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 329 ILANRQ-SAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 329 iLkNRE-SArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
-|+||| +-+.+|.||..-..++. .|.... --..++..|++++.....++.....+|..+
T Consensus 98 ~IR~~E~svqp~R~~R~~l~~~I~----kLk~k~-P~s~kl~~LeqELvraEae~lvaEAqL~n~ 157 (234)
T 3plt_A 98 SIRNIEASVQPSRDRKEKITDEIA----HLKYKD-PQSTKIPVLEQELVRAEAESLVAEAQLSNI 157 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHC-TTCTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH----HHhccC-CCCchHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 467777 44666666666544443 222211 112455566666666666655555555444
No 247
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=43.42 E-value=54 Score=30.77 Aligned_cols=55 Identities=13% Similarity=0.175 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFL 406 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL 406 (416)
+-|..+++.|+.+...|... -++|..+......|..+|-.-+.-..+.++|.+.|
T Consensus 75 ~~LR~r~~~Le~~L~~Li~~----A~~Ne~l~~~~~~l~l~LL~a~sl~~l~~~L~~~l 129 (252)
T 3e98_A 75 RLLRERNIEMRHRLSQLMDV----ARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSL 129 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 33444444444444333322 13444455555555444433333333433443333
No 248
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=43.28 E-value=37 Score=22.43 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 356 TLQTEATTLSAQVTILQRDSA 376 (416)
Q Consensus 356 ~LqsENs~Ls~Qlt~Lqre~~ 376 (416)
.|+-||..|.+++..|.+...
T Consensus 4 alefendaleqkiaalkqkia 24 (28)
T 3ra3_A 4 ALEFENDALEQKIAALKQKIA 24 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccHHHHHHHHHHHHHHH
Confidence 344455555544444444333
No 249
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=43.17 E-value=33 Score=25.71 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTS 380 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s 380 (416)
-..||.-|..|+..|..|...+..|+.+...|..
T Consensus 19 naklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 19 NAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 3457777777777777777777777766666543
No 250
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=42.97 E-value=1.1e+02 Score=24.12 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
.+.+...+..|+.+...++..++...++++.|+.-.-.|...|.
T Consensus 7 ~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIa 50 (74)
T 2xv5_A 7 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIH 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666666666665555555555555555544443
No 251
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=42.58 E-value=53 Score=35.23 Aligned_cols=40 Identities=30% Similarity=0.396 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q 014879 323 PKRAKRILANRQSAARSKER---KMRYISELEQKVQTLQTEATTL 364 (416)
Q Consensus 323 pKR~KRiLkNRESArRSReR---Kk~YleELE~KVq~LqsENs~L 364 (416)
+.+...++. +++++.|.+ +-..+++|++++..|+.|...|
T Consensus 378 p~kai~lld--ea~a~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~ 420 (854)
T 1qvr_A 378 PDKAIDLID--EAAARLRMALESAPEEIDALERKKLQLEIEREAL 420 (854)
T ss_dssp HHHHHHHHH--HHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHH--HHHHHHHhhccCCchhHHHHHHHHHHHHHHHHHH
Confidence 445555443 444444443 4566788888888777765443
No 252
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=42.54 E-value=1.1e+02 Score=24.00 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
+....|++.|+.+...+..++..|+++-
T Consensus 5 ~aiKkkmqaLk~Ekdna~e~~e~lE~ER 32 (75)
T 3mtu_A 5 DAIKKKMQMLKLDKENALDRAEQAEADK 32 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555555555555433
No 253
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=42.18 E-value=1.8e+02 Score=25.64 Aligned_cols=6 Identities=17% Similarity=0.562 Sum_probs=2.3
Q ss_pred HHHHHH
Q 014879 332 NRQSAA 337 (416)
Q Consensus 332 NRESAr 337 (416)
.|+++.
T Consensus 66 Dk~~~e 71 (152)
T 4fla_A 66 DKEAAE 71 (152)
T ss_dssp SHHHHH
T ss_pred cHHHHH
Confidence 344433
No 254
>3c9i_A Tail needle protein GP26; xenon, coiled-coil, protein fiber, coiled coil, late protein, viral protein; 1.95A {Bacteriophage P22} PDB: 2poh_A
Probab=42.13 E-value=2.3e+02 Score=26.94 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
|..+|.+|...+...+.-...|..++-+....+.+...|+.++++++...
T Consensus 86 I~a~~a~l~dHE~RIt~~~~~ia~~e~Rit~~e~~i~~l~~~v~~ld~~v 135 (242)
T 3c9i_A 86 IKQLRIDVDDHESRITANTKAITALNVRVTTAEGEIASLQTNVSALDGRV 135 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccccHHHHhhhhhhhhhhhhheeecccccchhhhhhhhhhcccc
Confidence 34445555555555555555666666666666666777777777776665
No 255
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=42.12 E-value=1.2e+02 Score=28.20 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 324 KRAKRILANRQSAARSKERKMRYISELEQKVQ 355 (416)
Q Consensus 324 KR~KRiLkNRESArRSReRKk~YleELE~KVq 355 (416)
.++-+....|+.|-+.-.++++.++.|-.+++
T Consensus 103 ~~Le~ae~eRe~aL~~el~RlerLe~La~kf~ 134 (235)
T 2odv_A 103 GKLHVAILEREKQLRSEFERLEALQRIVTKLQ 134 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666665555555544443
No 256
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=41.56 E-value=36 Score=30.04 Aligned_cols=18 Identities=11% Similarity=0.219 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATT 363 (416)
Q Consensus 346 YleELE~KVq~LqsENs~ 363 (416)
.+..++.+++.++.|...
T Consensus 31 k~~~~e~~~~~~~~Elee 48 (130)
T 3cl3_D 31 RARAASEQARQLESEREA 48 (130)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHhHHHHHH
Confidence 334444444444444433
No 257
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=41.49 E-value=1.1e+02 Score=23.13 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 363 TLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 363 ~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
+|..|++.|..++..|..|...=-.+|..||.
T Consensus 7 QL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ 38 (54)
T 1deb_A 7 QLLKQVEALKMENSNLRQELEDNSNHLTKLET 38 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHh
Confidence 44555555444444444444444444444443
No 258
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=41.24 E-value=2.5e+02 Score=29.77 Aligned_cols=52 Identities=12% Similarity=0.175 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 342 RKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 342 RKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
+++.-+..+|.-|+.++.....+..+...++.....+..|...++..+..++
T Consensus 360 dArNEItsaeSaInslqaqvSa~t~e~k~A~d~l~a~~kek~~~~n~~a~~~ 411 (602)
T 1cii_A 360 DARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGIN 411 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3444455555555555555555555555555555555555555544444433
No 259
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=41.16 E-value=41 Score=22.93 Aligned_cols=26 Identities=27% Similarity=0.410 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 368 VTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 368 lt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
+..|+++......||-.|.+.+..||
T Consensus 3 vaqlekevaqaeaenyqleqevaqle 28 (33)
T 1fmh_A 3 VAQLEKEVAQAEAENYQLEQEVAQLE 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34455555666667776666655554
No 260
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=41.10 E-value=14 Score=31.67 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 368 VTILQRDSAGLTSENNELKFRLQA 391 (416)
Q Consensus 368 lt~Lqre~~~L~sEN~ELK~RLqa 391 (416)
+..|..+++.|..||+.||.+|..
T Consensus 10 ~EeLaaeL~kLqmENK~LKkkl~~ 33 (110)
T 2oa5_A 10 YEEMVKEVERLKLENKTLKQKVKS 33 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455666777788999999988873
No 261
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=40.49 E-value=36 Score=30.83 Aligned_cols=18 Identities=33% Similarity=0.351 Sum_probs=0.0
Q ss_pred CccccccccccCCCCCCC
Q 014879 251 RHCRSVSMDSYMGNLPFD 268 (416)
Q Consensus 251 rH~rS~SmDs~~~~l~~~ 268 (416)
+|.+|.-+|-...+|-|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (175)
T 3lay_A 4 HHHHSSGVDLGTENLYFQ 21 (175)
T ss_dssp ------------------
T ss_pred ccccccccccchhHHHhh
Confidence 466677777666666554
No 262
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=40.34 E-value=37 Score=23.18 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 370 ILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
.|..+.+.|...|-..|+++|+|.
T Consensus 5 alkkrvqalkarnyaakqkvqalr 28 (33)
T 1fmh_B 5 ALKKRVQALKARNYAAKQKVQALR 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334444445555555555555553
No 263
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=40.20 E-value=1.4e+02 Score=23.76 Aligned_cols=44 Identities=9% Similarity=0.058 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL 389 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL 389 (416)
.+..+..++..|+.+...++..++...++++.|+.-.-.|...|
T Consensus 29 ~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EI 72 (86)
T 1x8y_A 29 ERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEI 72 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 34444555555555555555555555555555555444444333
No 264
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=40.03 E-value=55 Score=30.12 Aligned_cols=8 Identities=25% Similarity=0.530 Sum_probs=4.1
Q ss_pred cCHHHHHH
Q 014879 321 SDPKRAKR 328 (416)
Q Consensus 321 ~DpKR~KR 328 (416)
.++...-|
T Consensus 137 ~~p~e~i~ 144 (184)
T 3w03_C 137 ENPAEVIR 144 (184)
T ss_dssp SCHHHHHH
T ss_pred CChHHHHH
Confidence 35555554
No 265
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=39.97 E-value=56 Score=32.80 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE---NNELKFRLQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE---N~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
..+.+|..+-..++.+...|.++...+.++...++.. -.+|+.++..+..+.+--++....+.+|++.+
T Consensus 30 ~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 2dq3_A 30 DKVLELDKRRREIIKRLEALRSERNKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNT 101 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSSCSCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555555555554443221 23455555555555443344444455555443
No 266
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=39.92 E-value=83 Score=25.06 Aligned_cols=22 Identities=27% Similarity=0.493 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 364 LSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 364 Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
|...+..|..++..|....+.+
T Consensus 4 L~k~i~~l~~E~eel~~klk~~ 25 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKA 25 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444333333333333333
No 267
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=39.68 E-value=3e+02 Score=28.98 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRDSAG 377 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre~~~ 377 (416)
+-|.+|+..+++|..+.++++.+++++..
T Consensus 31 ~Ye~~~ae~~a~n~~i~aeNeaikkrNa~ 59 (497)
T 3iox_A 31 AYEAAVAANNAANAALTAENTAIKKRNAD 59 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 34444455555444444444444444443
No 268
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=39.60 E-value=1.2e+02 Score=24.99 Aligned_cols=63 Identities=16% Similarity=0.138 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 014879 351 EQKVQTLQTEATTLSAQVTILQRDSAGLTSEN----NELKFRLQAMEQQ-AQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN----~ELK~RLqaLEqQ-aqLrdALnEaL~~EvqrL~ 414 (416)
.+.|+.++......+.+|+.+++....+.... +.|..=|+.+.+- .-|. +.-..|+++|++|+
T Consensus 11 ~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~FiaLA-a~l~~lH~~V~~~K 78 (93)
T 3t98_B 11 RVLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA-AQLQSIHENVKVLK 78 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34455555666666666666666666554311 2343333333222 1122 33445566666654
No 269
>2jmh_A BLO T 5, mite allergen BLO T 5; DUST mites, group 5; NMR {Blomia tropicalis} PDB: 2jrk_A
Probab=39.59 E-value=1.2e+02 Score=26.41 Aligned_cols=59 Identities=12% Similarity=0.170 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRL-QAMEQQAQLKDGINSFLLFYYLL 412 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RL-qaLEqQaqLrdALnEaL~~Evqr 412 (416)
..++.+...++.-.-.|+.|++.|++ +.++++|.+| ..|+-..-+-+.-...|..|++|
T Consensus 22 ~~~~~~~~k~E~~Ll~Ls~Qi~~LE~------tKsKe~K~~IlrEi~~~~~~i~Ga~~~lerElkR 81 (119)
T 2jmh_A 22 EQANHAIEKGEHQLLYLQHQLDELNE------NKSKELQEKIIRELDVVCAMIEGAQGALERELKR 81 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH------HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444444444455555555543 3344444442 33444444444555555555554
No 270
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=39.50 E-value=1.7e+02 Score=24.61 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 352 QKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 352 ~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
.++..|......|..++..++.+.......|..|
T Consensus 69 E~~~~L~~~k~eLe~~l~el~~rleeeee~~~~L 102 (129)
T 2fxo_A 69 ERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAEL 102 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333344444443333333333333
No 271
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=39.46 E-value=29 Score=23.44 Aligned_cols=26 Identities=27% Similarity=0.360 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
+.|-.-+..|+.||.+|.+++..|..
T Consensus 2 dqlnallasleaenkqlkakveella 27 (31)
T 1p9i_A 2 DQLNALLASLEAENKQLKAKVEELLA 27 (31)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666778888888888888877653
No 272
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=39.42 E-value=43 Score=23.39 Aligned_cols=19 Identities=26% Similarity=0.365 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014879 355 QTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 355 q~LqsENs~Ls~Qlt~Lqr 373 (416)
+..+.+...|++|+..|+.
T Consensus 10 ~a~qqDIddlkrQN~~Le~ 28 (34)
T 1a93_B 10 DTHQQDIDDLKRQNALLEQ 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhhHhhHHHHHHHHHHHHH
Confidence 3333333334444333333
No 273
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=39.42 E-value=1.7e+02 Score=24.56 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
Q 014879 334 QSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSE-------NNELKFRLQAMEQQ 395 (416)
Q Consensus 334 ESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sE-------N~ELK~RLqaLEqQ 395 (416)
++-+-||+-=.++..+|+.-+..|+.||..-...+..|+..+.....- .-+|..||..+|..
T Consensus 14 e~EK~S~eeL~kQk~eL~~~l~~l~~e~~~R~~~i~el~akidd~Lk~l~~EklAkldLE~RLsKtEKD 82 (101)
T 1d7m_A 14 ESEKVSREQLIKQKDQLNSLLASLESEGAEREKRLRELEAKLDETLKNLELEKLARMELEARLAKTEKD 82 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHhhhhhH
Confidence 344456666666778888888888888888777777777666544332 22455566666554
No 274
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=39.31 E-value=1.2e+02 Score=24.06 Aligned_cols=48 Identities=25% Similarity=0.276 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATT------LSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 346 YleELE~KVq~LqsENs~------Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
.|+.||.++..|+.+... =..+++.|..+...+..+..++-.|=..|+
T Consensus 30 ~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe 83 (89)
T 2lw1_A 30 LLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLE 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777777777766543 124566666666666666666666655554
No 275
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}
Probab=39.22 E-value=1.3e+02 Score=28.78 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHH
Q 014879 384 ELKFRLQAMEQQAQ-LKDGINSFLLF 408 (416)
Q Consensus 384 ELK~RLqaLEqQaq-LrdALnEaL~~ 408 (416)
..+.+|..++++++ +|+++.+.|..
T Consensus 171 ~~~k~L~~~~~kv~~vr~~leelLdd 196 (261)
T 3rkg_A 171 IKSKDLTLFYQKTLLIRDLLDELLEN 196 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34457888888764 78888888754
No 276
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=39.09 E-value=41 Score=23.50 Aligned_cols=21 Identities=19% Similarity=0.283 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 370 ILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~RLq 390 (416)
.|+..+..|..+|.+|..++.
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~ 25 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVX 25 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHH
Confidence 344455555555555544443
No 277
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=39.09 E-value=3.4e+02 Score=28.45 Aligned_cols=14 Identities=7% Similarity=-0.320 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHhh
Q 014879 401 GINSFLLFYYLLLL 414 (416)
Q Consensus 401 ALnEaL~~EvqrL~ 414 (416)
...+.+..+||||+
T Consensus 139 ~~l~~q~skIQRLE 152 (491)
T 1m1j_A 139 NSIQEQVVEMKRLE 152 (491)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44455566677765
No 278
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=38.96 E-value=87 Score=28.07 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 369 TILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 369 t~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
..|.++..........++..|+.++
T Consensus 69 ~~l~rdleasr~akk~~ea~la~l~ 93 (146)
T 2xnx_M 69 EAITREQEINRNLLGNAKLELDQLS 93 (146)
T ss_dssp TTHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 4444444444444444544444443
No 279
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=38.68 E-value=44 Score=26.30 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 342 RKMRYISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 342 RKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.|...|.+||..+..-..++..|+.++..++.
T Consensus 22 ~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs 53 (67)
T 1zxa_A 22 LKEERIKELEKRLSEKEEEIQELKRKLHKCQS 53 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888888888888887777665543
No 280
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=38.40 E-value=1.6e+02 Score=23.83 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
|+.|-+.-+.|..=-+.|..-++.|+++...|......|+.+.+.|+
T Consensus 27 l~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~ 73 (78)
T 3iv1_A 27 LNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELS 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444555555555555555555555555555443
No 281
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=38.33 E-value=1.5e+02 Score=23.45 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSEN 382 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN 382 (416)
+.++..++..|+.+...++..++...++++.|+.-.
T Consensus 28 ~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK 63 (84)
T 1gk4_A 28 AANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVK 63 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444444333
No 282
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=38.16 E-value=1.2e+02 Score=25.39 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEAT---TLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 351 E~KVq~LqsENs---~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
+.+|+.+..++. .|..|...|+.-..++-.=...|..-+..|++
T Consensus 34 ~~riek~k~e~~Dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~ 80 (108)
T 1h7c_A 34 EEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQR 80 (108)
T ss_dssp HHHHHHHHHHHCSCTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 334444444422 46667666666555555545555444444443
No 283
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=38.14 E-value=2.2e+02 Score=25.48 Aligned_cols=71 Identities=21% Similarity=0.222 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDS---------AGLTSENNELKFR-LQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~---------~~L~sEN~ELK~R-LqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
+..++.|..+-...|.|..+|++++..+|+.+ ..+..-.+.|-.| |..||-..+=+|..-|.|++-|.-|
T Consensus 45 qgKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lkrn~~qQnQQSlDiRKLrELEADLKEKDsMVe~LT~TiG~L 124 (167)
T 4gkw_A 45 QGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRKLGELEADLKEKDSMVESLTETIGIL 124 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhHHHhHhhhhHHHHHHHHhHHhhhhHHHHHHHHHHHHH
Q ss_pred h
Q 014879 414 L 414 (416)
Q Consensus 414 ~ 414 (416)
+
T Consensus 125 r 125 (167)
T 4gkw_A 125 R 125 (167)
T ss_dssp H
T ss_pred H
No 284
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=38.13 E-value=1.5e+02 Score=24.35 Aligned_cols=14 Identities=21% Similarity=0.216 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q 014879 374 DSAGLTSENNELKF 387 (416)
Q Consensus 374 e~~~L~sEN~ELK~ 387 (416)
++..+..+-++||.
T Consensus 42 ~hI~~Lh~YNeiKD 55 (85)
T 3viq_B 42 KHIDLLHTYNEIRD 55 (85)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHH
Confidence 33444444444443
No 285
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=37.69 E-value=54 Score=22.11 Aligned_cols=7 Identities=43% Similarity=0.605 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 014879 350 LEQKVQT 356 (416)
Q Consensus 350 LE~KVq~ 356 (416)
||.+...
T Consensus 6 lekkcaa 12 (31)
T 3ljm_A 6 LEKKCAA 12 (31)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 286
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=37.68 E-value=1.6e+02 Score=25.00 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=18.4
Q ss_pred ccChHHHHhhhhhhhHhhhhccCHHHHHHHHHH
Q 014879 300 EFNDAELKKIWANEKLAEIALSDPKRAKRILAN 332 (416)
Q Consensus 300 ~~s~~e~kKi~~~~~LaElAl~DpKR~KRiLkN 332 (416)
.|+..++..+.-=-.|.++- .--+.+|+++..
T Consensus 54 ~Y~~~dl~~l~~I~~lr~~G-~sL~eIk~~l~~ 85 (148)
T 3gpv_A 54 IFNEEALKYLEMILCLKNTG-MPIQKIKQFIDW 85 (148)
T ss_dssp EBCHHHHHHHHHHHHHHTTT-CCHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHcC-CCHHHHHHHHHh
Confidence 46667776665555554432 344566666664
No 287
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=37.57 E-value=1e+02 Score=30.26 Aligned_cols=24 Identities=21% Similarity=0.407 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQV 368 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Ql 368 (416)
+|+++|+.+++.|+.+..++..++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~ 270 (426)
T 1lrz_A 247 EYIKELNEERDILNKDLNKALKDI 270 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666666666666665555444
No 288
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=37.37 E-value=20 Score=33.82 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 330 LANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 330 LkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
++=|+...--=+...+..+++..++++|+.||+.+.+++..|+++.....++--..++.+..|
T Consensus 133 ~~FRE~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~e~~te~~p~~k~~~ql 195 (250)
T 2ve7_C 133 IHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDEDTTVTIPSAVYVAQL 195 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCC-------------CTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 334555555556677777889999999999999988888888877666555543333333333
No 289
>3mq1_A Mite allergen DER P 5; DUST mite; HET: MRD MPD; 2.80A {Dermatophagoides pteronyssinus}
Probab=37.31 E-value=1e+02 Score=26.23 Aligned_cols=59 Identities=14% Similarity=0.216 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFR-LQAMEQQAQLKDGINSFLLFYYLL 412 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~R-LqaLEqQaqLrdALnEaL~~Evqr 412 (416)
..++.+...++.-.-.|+.|++.|++ +.++++|.+ |..++--.-+-+.-...|..|++|
T Consensus 7 ~~~~~~~~k~E~~Ll~Ls~Qi~~LEk------tKsKe~K~~IlrEi~~~~~~i~Ga~~~lerElkR 66 (103)
T 3mq1_A 7 ERIHEQIKKGELALFYLQEQINHFEE------KPTKEMKDKIVAEMDTIIAMIDGVRGVLDRLMQR 66 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH------SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444555555555555555555543 344555555 344555555555555566666554
No 290
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=37.25 E-value=1.9e+02 Score=24.34 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 335 SAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNE 384 (416)
Q Consensus 335 SArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~E 384 (416)
+.+.|=+--+---++|-.+.+.|+.-...|..+...-...+..|.....+
T Consensus 8 ~le~sLe~EK~S~eeL~kQk~eL~~~l~~l~~e~~~R~~~i~el~akidd 57 (101)
T 1d7m_A 8 GLENSLESEKVSREQLIKQKDQLNSLLASLESEGAEREKRLRELEAKLDE 57 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555556666666666666666666666555555555554443
No 291
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=37.15 E-value=1.9e+02 Score=30.54 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL 413 (416)
.-++..+..|+.+...+.+++..++.+...|...-.+++.+|..+.... ...+.+.++..+.+|
T Consensus 348 ~~i~~~l~~l~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~~v~~~l~~~i~~l 411 (695)
T 2j69_A 348 EAVARRIPLLEQDVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQ--ARTISESFRSYVLNL 411 (695)
T ss_dssp HHHHHHHHHHTSCSHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 3356666666666777777777777777777766666666666654322 222334445555444
No 292
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=37.14 E-value=4.1 Score=34.70 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 360 EATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 360 ENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
+...|..++..|+.+...|..||..|+..++.|
T Consensus 59 ~~~~LE~e~~~L~~e~e~L~~En~~l~~E~~~l 91 (107)
T 3a5t_A 59 QKEELEKQKAELQQEVEKLASENASMKLELDAL 91 (107)
T ss_dssp HHHHHHHHHTTTSSTTTTTTSTTSHHHHTTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566666666666777777776665554
No 293
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=37.01 E-value=1.8e+02 Score=24.73 Aligned_cols=44 Identities=14% Similarity=0.205 Sum_probs=24.6
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTE---ATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 351 E~KVq~LqsE---Ns~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
+.+|+.++.+ ...|..|...|+.-..++-.=.+.|..-+..|++
T Consensus 35 ~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~ 81 (116)
T 3mxz_A 35 AAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKS 81 (116)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3444455442 3457777777776666665555555544444443
No 294
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=36.82 E-value=1.5e+02 Score=25.19 Aligned_cols=61 Identities=13% Similarity=0.136 Sum_probs=31.5
Q ss_pred ccccChHHHHhhhhhhhHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 298 NGEFNDAELKKIWANEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 298 ~g~~s~~e~kKi~~~~~LaElAl~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
.-.|+-.+++.++.-....+ .....++.++ .+++++|+.+++.|+.....|...+...+..
T Consensus 57 ~~G~sL~eIk~~l~~~~~~~---~~~~~~~~~L-------------~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~ 117 (142)
T 3gp4_A 57 RAGLSIEALIDYLALFREGE---HTLEARAELL-------------KKQRIELKNRIDVMQEALDRLDFKIDNYDTH 117 (142)
T ss_dssp HTTCCHHHHHHHHHHHHHCG---GGHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HcCCCHHHHHHHHHHHhccC---CCHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788888876433221 1122222232 2344566666666666555555555554443
No 295
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=36.66 E-value=2.3e+02 Score=26.81 Aligned_cols=27 Identities=11% Similarity=0.143 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 368 VTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 368 lt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
|..+......+..+--.+-..+|.||.
T Consensus 219 v~~~n~~~~~~~~~~~~~~~~~Q~lee 245 (350)
T 3aco_A 219 LKELDQGTPQYMENMEQVFEQCQQFEE 245 (350)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444444444455566554
No 296
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=36.16 E-value=1.9e+02 Score=24.03 Aligned_cols=28 Identities=11% Similarity=0.084 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
++.|.||..--.|-+.++..|-.|+..+
T Consensus 39 ~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h 66 (92)
T 3vp9_A 39 KDYDFKMNQQLAEMQQIRNTVYERELTH 66 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555444444444444444444333
No 297
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=35.72 E-value=75 Score=21.66 Aligned_cols=11 Identities=36% Similarity=0.211 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 014879 375 SAGLTSENNEL 385 (416)
Q Consensus 375 ~~~L~sEN~EL 385 (416)
...|.-|...|
T Consensus 18 iaalkfeiaal 28 (33)
T 4dzn_A 18 IAALKFEIAAL 28 (33)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 298
>1qsd_A Protein (beta-tubulin binding post-chaperonin cofactor); four-helix-bundle, chaperone; 2.20A {Saccharomyces cerevisiae} SCOP: a.7.5.1
Probab=35.29 E-value=2e+02 Score=24.04 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 325 RAKRILANRQSAARSKERKMRYISELEQKVQTLQTE----ATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 325 R~KRiLkNRESArRSReRKk~YleELE~KVq~LqsE----Ns~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
-++|+++-..+-.+- +.+.+.+|+.+..+ ...|..|...|+.-..++-.=...|..-+..|++
T Consensus 12 ~vkRL~KE~~~Y~kE-------~~~q~~riek~k~~~~~dey~iKkq~evl~Et~~mipd~~~Rl~~a~~~L~~ 78 (106)
T 1qsd_A 12 ALKRLTKEEGYYQQE-------LKDQEAHVAKLKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQ 78 (106)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 356666553333222 22333444444443 2346666666665555555555555444444443
No 299
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=34.99 E-value=40 Score=24.07 Aligned_cols=20 Identities=40% Similarity=0.478 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTL 364 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~L 364 (416)
+.|..|+.+++.|+.|...|
T Consensus 15 eQi~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 15 EQILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555554444
No 300
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=34.91 E-value=1.4e+02 Score=27.79 Aligned_cols=27 Identities=11% Similarity=0.226 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
+.|+.++..|+.+...|..++..++.+
T Consensus 62 ~~l~~~l~~l~~e~~el~d~~lR~~AE 88 (213)
T 4ani_A 62 AAAKAQIAELEAKLSEMEHRYLRLYAD 88 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433333
No 301
>3hrn_A Transient receptor potential (Trp) channel subfamily P member 2 (TRPP2); coiled coil, helix bundle, trimer, calcium, disease mutation, glycoprotein; 1.90A {Homo sapiens} PDB: 3hro_A
Probab=34.89 E-value=1.6e+02 Score=23.05 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 359 TEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQL 398 (416)
Q Consensus 359 sENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqL 398 (416)
.|-+.|..++-.|+.-..+++++...+-.+|..+|..-..
T Consensus 6 EEF~~L~rRVlqLE~sl~gI~SqIDaV~~KL~~~Er~k~~ 45 (64)
T 3hrn_A 6 EEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLK 45 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3455666666666666666666666666666666654333
No 302
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=34.64 E-value=20 Score=35.42 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLT 379 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~ 379 (416)
.|..||.+|..++++...|...+..++.+++.|.
T Consensus 5 ~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~ 38 (319)
T 1fzc_C 5 EIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLK 38 (319)
T ss_dssp -----CTTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666555555555555544444433
No 303
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=34.44 E-value=1.9e+02 Score=23.62 Aligned_cols=8 Identities=38% Similarity=0.522 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q 014879 348 SELEQKVQ 355 (416)
Q Consensus 348 eELE~KVq 355 (416)
.-|+..|+
T Consensus 17 SALeaEIq 24 (81)
T 1wt6_A 17 EALEEEVL 24 (81)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33444443
No 304
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=34.35 E-value=1.5e+02 Score=22.48 Aligned_cols=52 Identities=21% Similarity=0.201 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 331 ANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 331 kNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+||+-|-.-=..| +++|...|..-..+....+.+|..|.+.++.|..|...|
T Consensus 24 knr~EaE~~y~~k---~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~sl 75 (77)
T 3trt_A 24 KNLQEAEEWYKSK---FADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDAL 75 (77)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHH---HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4555544322222 456666666655555566666666666666666665544
No 305
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=34.35 E-value=1.2e+02 Score=27.45 Aligned_cols=20 Identities=15% Similarity=0.167 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 014879 340 KERKMRYISELEQKVQTLQT 359 (416)
Q Consensus 340 ReRKk~YleELE~KVq~Lqs 359 (416)
=++|++|+.||..+...++.
T Consensus 21 I~~K~~~LqeL~~Q~vafkn 40 (155)
T 2aze_A 21 IKQKQSQLQELILQQIAFKN 40 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 36788888888887666543
No 306
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=34.20 E-value=32 Score=27.54 Aligned_cols=14 Identities=14% Similarity=-0.256 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhh
Q 014879 401 GINSFLLFYYLLLL 414 (416)
Q Consensus 401 ALnEaL~~EvqrL~ 414 (416)
.+++.|+.||.||+
T Consensus 50 eq~~lLK~EIRRlE 63 (71)
T 3bbp_D 50 EQIKLLKSEIRRLE 63 (71)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56777889998886
No 307
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=34.11 E-value=63 Score=27.66 Aligned_cols=22 Identities=14% Similarity=0.252 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTI 370 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~ 370 (416)
.|+..++.|+.....+..+++.
T Consensus 109 ~l~~~l~~l~~~l~~l~~~i~~ 130 (151)
T 2zdi_C 109 EYDEAIKKTQGALAELEKRIGE 130 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444443
No 308
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal transduction, transducer, transcription factor; HET: PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 1uus_A*
Probab=33.82 E-value=4.3e+02 Score=27.52 Aligned_cols=59 Identities=24% Similarity=0.201 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014879 356 TLQTEATTLSAQVTILQRDSAGLTS----ENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLLH 415 (416)
Q Consensus 356 ~LqsENs~Ls~Qlt~Lqre~~~L~s----EN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~q 415 (416)
.|+.+-.+|..++..=..+...|.. |=.+|+ +|..|.|+.++.-..-+.|..|++.|.+
T Consensus 56 ~l~~~~~~~~~~~~~e~~~l~~~~~~~il~p~~l~-~l~~l~q~L~~~~~~l~~l~~el~~~l~ 118 (473)
T 1uur_A 56 SLSQKQITLSGQMNTEMSALDATKKGMILEPTDLA-KLFALKQDLQIQFKQLSLLHNEIQSILN 118 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCChHHHh-HHHHHHHHhHhhhhHHHHHHHHHHHHHh
Confidence 3777777777766543333333222 222333 5555555555555666778999998875
No 309
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=33.54 E-value=2.1e+02 Score=23.86 Aligned_cols=25 Identities=8% Similarity=0.134 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 368 VTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 368 lt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
|..|+.....+..++.+|..++..+
T Consensus 70 l~~lq~~l~~~~~~~~~l~~~~~~l 94 (107)
T 2no2_A 70 LQVLQGSLETSAQSEANWAAEFAEL 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445555555555554444333
No 310
>2p0t_A UPF0307 protein pspto_4464; APC85033, conserved putative protein, pseudomonas syringae P STR. DC3000, structural genomics, PSI-2; 2.19A {Pseudomonas syringae PV} SCOP: a.290.1.1
Probab=33.50 E-value=61 Score=29.58 Aligned_cols=21 Identities=19% Similarity=0.483 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 333 RQSAARSKERKMRYISELEQK 353 (416)
Q Consensus 333 RESArRSReRKk~YleELE~K 353 (416)
|......|.|..+||.-|=+.
T Consensus 61 ri~~~earRRQlqyIGKLmR~ 81 (176)
T 2p0t_A 61 KHTANIARKRHILFIGKLMRD 81 (176)
T ss_dssp GCCSHHHHHHHHHHHHHHGGG
T ss_pred hccccHHHHHHHHHHHHHHhc
Confidence 333344788999999877654
No 311
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=33.50 E-value=1.2e+02 Score=27.46 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHH
Q 014879 377 GLTSENNELKFRL 389 (416)
Q Consensus 377 ~L~sEN~ELK~RL 389 (416)
.|..|..+|+.++
T Consensus 117 aL~~Ei~~Lr~qL 129 (175)
T 3lay_A 117 AVAKEMESLGQKL 129 (175)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3334444443333
No 312
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=33.37 E-value=88 Score=25.55 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDS 375 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~ 375 (416)
.+.+.+.|.+.+.|+..|..|..++.+|+.+.
T Consensus 48 ~~r~~e~e~r~k~le~~n~~l~~riqELE~qa 79 (83)
T 4ath_A 48 QQRAKDLENRQKKLEHANRHLLLRVQELEMQA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 35567888899999999999999988887554
No 313
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=33.22 E-value=40 Score=28.83 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
+|..+|+.|+.|+..|..++..|+.+
T Consensus 29 ~l~~~v~~l~~e~k~l~ke~~~l~~~ 54 (171)
T 2zvf_A 29 KLPKTVERFFEEWKDQRKEIERLKSV 54 (171)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444443
No 314
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=32.75 E-value=1.1e+02 Score=25.06 Aligned_cols=12 Identities=25% Similarity=0.393 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHH
Q 014879 381 ENNELKFRLQAM 392 (416)
Q Consensus 381 EN~ELK~RLqaL 392 (416)
||..|..+|..+
T Consensus 47 EN~~Lh~~ie~l 58 (83)
T 1uii_A 47 ENEKLHKEIEQK 58 (83)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444333
No 315
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=32.70 E-value=1.7e+02 Score=23.55 Aligned_cols=28 Identities=25% Similarity=0.348 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.+..||..+..||+.-+.|.++++..|.
T Consensus 8 Kv~~LE~sld~LQTrfARLLaEy~ssQ~ 35 (74)
T 3swf_A 8 KVTRMESSVDLLQTRFARILAEYESMQQ 35 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777777777766665553
No 316
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=32.70 E-value=42 Score=22.94 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHH
Q 014879 383 NELKFRLQAMEQQ 395 (416)
Q Consensus 383 ~ELK~RLqaLEqQ 395 (416)
++|..|+..||..
T Consensus 16 q~lq~r~drle~t 28 (32)
T 2akf_A 16 QKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444433
No 317
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=32.58 E-value=1.1e+02 Score=27.62 Aligned_cols=11 Identities=9% Similarity=-0.022 Sum_probs=5.8
Q ss_pred HHHHHHHHHHH
Q 014879 323 PKRAKRILANR 333 (416)
Q Consensus 323 pKR~KRiLkNR 333 (416)
-+.+|+++.++
T Consensus 66 l~~i~~~~~~~ 76 (278)
T 1r8e_A 66 LEEMKKAQDLE 76 (278)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHHHhC
Confidence 34456666544
No 318
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=32.52 E-value=70 Score=28.15 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLT 379 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~ 379 (416)
+..||+++..++.....+..++..|+.+.+.|.
T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (192)
T 2gkw_A 2 TGLLESQLSRHDQMLSVHDIRLADMDLRFQVLE 34 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345666666666655555555555544444433
No 319
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=32.37 E-value=41 Score=29.70 Aligned_cols=46 Identities=11% Similarity=0.188 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
+..|...+.....+...|..+++.-+........++..+...|+.|
T Consensus 34 l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~L 79 (135)
T 2e7s_A 34 YNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDL 79 (135)
T ss_dssp HHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555666777777766665556666666666666666655
No 320
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=32.31 E-value=24 Score=26.45 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
-.||..|..-+..|+.++..|......|...+..||.
T Consensus 16 lkenaklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 16 LKENAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 3577777777777777666666666666655555543
No 321
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=32.29 E-value=53 Score=22.84 Aligned_cols=20 Identities=25% Similarity=0.254 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 014879 371 LQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 371 Lqre~~~L~sEN~ELK~RLq 390 (416)
|+..+..|..+|.+|...+.
T Consensus 5 LE~kVEeLl~~n~~Le~EV~ 24 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENEVA 24 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHH
Confidence 44444455555555544433
No 322
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=31.86 E-value=2.7e+02 Score=25.67 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 369 TILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 369 t~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
..+......+..+--.+-..+|.||.
T Consensus 220 ~~~n~~~~~~~~~~~~~~~~~Q~lee 245 (312)
T 3abh_A 220 KELDQGTPQYMENMEQVFEQCQQFEE 245 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444444555554
No 323
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=31.83 E-value=1.8e+02 Score=26.14 Aligned_cols=12 Identities=25% Similarity=0.235 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHH
Q 014879 324 KRAKRILANRQS 335 (416)
Q Consensus 324 KR~KRiLkNRES 335 (416)
+-++..++.|+.
T Consensus 144 ~~i~~~ikKR~~ 155 (251)
T 2fic_A 144 PDIKSRIAKRGR 155 (251)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344444433
No 324
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=31.58 E-value=4.1e+02 Score=26.60 Aligned_cols=21 Identities=10% Similarity=0.116 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 375 SAGLTSENNELKFRLQAMEQQ 395 (416)
Q Consensus 375 ~~~L~sEN~ELK~RLqaLEqQ 395 (416)
...+..+-..+-..+|.||.+
T Consensus 219 ~~~y~~~~~~~~~~lQ~lEee 239 (486)
T 3haj_A 219 TPQYMENMEQVFEQCQQFEEK 239 (486)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333444444455556666544
No 325
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=31.50 E-value=3.2e+02 Score=25.41 Aligned_cols=19 Identities=11% Similarity=0.046 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014879 376 AGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 376 ~~L~sEN~ELK~RLqaLEq 394 (416)
..+..+--.+-..+|.||.
T Consensus 218 ~~~~~~~~~~~~~~Q~le~ 236 (337)
T 2x3v_A 218 PQYMEGMEQVFEQCQQFEE 236 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333444444444555544
No 326
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=31.41 E-value=3.1e+02 Score=25.81 Aligned_cols=20 Identities=20% Similarity=0.420 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSA 366 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~ 366 (416)
|+.|+.++..|+.||..|..
T Consensus 124 ie~l~eEi~~LkeEn~eLke 143 (209)
T 2wvr_A 124 IEQKDNEIARLKKENKELAE 143 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555555443
No 327
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=31.31 E-value=3.1e+02 Score=28.57 Aligned_cols=7 Identities=14% Similarity=-0.354 Sum_probs=2.6
Q ss_pred HHHHHHh
Q 014879 407 LFYYLLL 413 (416)
Q Consensus 407 ~~EvqrL 413 (416)
+..||.|
T Consensus 176 ~~~i~~l 182 (461)
T 3ghg_B 176 RSKIQKL 182 (461)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 328
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=31.23 E-value=47 Score=29.00 Aligned_cols=16 Identities=13% Similarity=-0.112 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHhh
Q 014879 399 KDGINSFLLFYYLLLL 414 (416)
Q Consensus 399 rdALnEaL~~EvqrL~ 414 (416)
+...+.-|..|-+.|.
T Consensus 56 k~~q~~~lske~~~l~ 71 (123)
T 2lf0_A 56 REVHSQKLSKEAQKLM 71 (123)
T ss_dssp HHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHhHHHHHHH
Confidence 3333333444444443
No 329
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=30.92 E-value=62 Score=22.11 Aligned_cols=25 Identities=24% Similarity=0.396 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.||..|..|++-.++|..++..|+.
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~ 27 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEE 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555555555443
No 330
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=30.74 E-value=69 Score=22.56 Aligned_cols=12 Identities=25% Similarity=0.072 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q 014879 377 GLTSENNELKFR 388 (416)
Q Consensus 377 ~L~sEN~ELK~R 388 (416)
.|..+|..|..+
T Consensus 24 ~LE~~N~~Le~~ 35 (39)
T 1gk7_A 24 FLEQQNKILLAE 35 (39)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444333
No 331
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=30.45 E-value=2.2e+02 Score=23.25 Aligned_cols=52 Identities=12% Similarity=0.209 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDG 401 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdA 401 (416)
.|+.+++.|+.+...|..++..+..+.... .-+.+++.-|..|..=-.|+|+
T Consensus 5 ~L~~~i~~L~~q~~~L~~ei~~~~a~L~~~-~~~~~~~~hI~~Lh~YNeiKD~ 56 (85)
T 3viq_B 5 QLESRVHLLEQQKEQLESSLQDALAKLKNR-DAKQTVQKHIDLLHTYNEIRDI 56 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHhHHHHH
Confidence 344444444444444444444433221100 0134556666666665566654
No 332
>1zhc_A Hypothetical protein HP1242; A-helical protein, unknown function; NMR {Helicobacter pylori}
Probab=30.43 E-value=1.2e+02 Score=23.83 Aligned_cols=26 Identities=15% Similarity=0.187 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 374 DSAGLTSENNELKFRLQAMEQQAQLK 399 (416)
Q Consensus 374 e~~~L~sEN~ELK~RLqaLEqQaqLr 399 (416)
+...|..+.-.||.+|..+-.+..-.
T Consensus 45 ~l~~LKk~KL~LKDeI~~lL~~~~~~ 70 (76)
T 1zhc_A 45 EVSHMKKQKLKLKDEIHSMIIEYREK 70 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 45555566666666666655544433
No 333
>2js5_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Methylococcus capsulatus}
Probab=30.37 E-value=2.1e+02 Score=22.81 Aligned_cols=21 Identities=10% Similarity=0.126 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 373 RDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 373 re~~~L~sEN~ELK~RLqaLE 393 (416)
+++-....+-.+++.+|.+||
T Consensus 45 ~~tyda~~~l~~ak~~L~~~~ 65 (71)
T 2js5_A 45 EKTYEAYRQLDEFRKSTASLE 65 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444443
No 334
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=30.30 E-value=2.4e+02 Score=27.51 Aligned_cols=68 Identities=13% Similarity=0.019 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
+.+|..|...+...+.+...+...|..++.++ ......|+.....|.....-..+..+.|+.||..|.
T Consensus 122 ~~~L~~L~~~i~~~q~~~~~~~~~L~~F~~~l---~~d~~~f~~~~~~l~~~L~~~~~~I~~Lq~eI~~l~ 189 (346)
T 2nrj_A 122 KEGITDLRGEIQQNQKYAQQLIEELTKLRDSI---GHDVRAFGSNKELLQSILKNQGADVDADQKRLEEVL 189 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHhhHHhHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 44555555555555555555555555444332 222223333344443333333344556677777654
No 335
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=30.14 E-value=1.1e+02 Score=20.77 Aligned_cols=28 Identities=21% Similarity=0.402 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
++.|..+|+.|...|-....+++.|...
T Consensus 3 vqalkkrvqalkarnyaakqkvqalrhk 30 (33)
T 1fmh_B 3 VQALKKRVQALKARNYAAKQKVQALRHK 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3455666666666666666666555543
No 336
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=30.02 E-value=42 Score=22.18 Aligned_cols=14 Identities=29% Similarity=0.434 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHH
Q 014879 379 TSENNELKFRLQAM 392 (416)
Q Consensus 379 ~sEN~ELK~RLqaL 392 (416)
...|..||+.+.+|
T Consensus 6 kqknarlkqeiaal 19 (28)
T 3ra3_B 6 KQKNARLKQEIAAL 19 (28)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHH
Confidence 34444444444443
No 337
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=29.93 E-value=4.3e+02 Score=26.40 Aligned_cols=10 Identities=20% Similarity=0.391 Sum_probs=4.4
Q ss_pred HHHHHhhccc
Q 014879 175 DLFNEYMNLE 184 (416)
Q Consensus 175 dl~~~ym~l~ 184 (416)
+||..-+.+|
T Consensus 43 ~f~keRa~iE 52 (486)
T 3haj_A 43 NCLHERARIE 52 (486)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 338
>1avy_A Fibritin, gpwac M; bacteriophage T4, structural protein, chaperone, bacteriopha assembly, protein folding; 1.85A {Enterobacteria phage T4} SCOP: h.1.17.1
Probab=29.87 E-value=1.2e+02 Score=24.44 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGL 378 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L 378 (416)
..||..+..+..|...+...++.+|.+.+.|
T Consensus 11 k~~eT~iaa~~~ev~t~~~~l~~~e~~vqaL 41 (74)
T 1avy_A 11 KAIETDIASVRQEVNTAKGNISSLQGDVQAL 41 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhheeeccccchhhhhhhhhHHH
Confidence 3444444444444444444444444444333
No 339
>3pik_A Cation efflux system protein CUSC; beta-barrel, lipoprotein, outer membrane; HET: UNL; 2.30A {Escherichia coli}
Probab=29.63 E-value=3.5e+02 Score=25.26 Aligned_cols=27 Identities=15% Similarity=0.113 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 343 KMRYISELEQKVQTLQTEATTLSAQVT 369 (416)
Q Consensus 343 Kk~YleELE~KVq~LqsENs~Ls~Qlt 369 (416)
...-..++..+|...-.+......++.
T Consensus 349 ~~~~~~~~~~~v~~a~~~~~~~~~~~~ 375 (446)
T 3pik_A 349 YEQKIQNAFKEVADALALRQSLNDQIS 375 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444444444444
No 340
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=29.52 E-value=74 Score=31.66 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=29.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 321 SDPKRAKRILANRQSAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 321 ~DpKR~KRiLkNRESArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
.|||....+|. ....+-.|+--+..|..+.. ..+++...+..++.++.+-+++||+|.
T Consensus 249 pdP~AA~alL~-----------~L~~llgl~ip~~~L~e~Ae-------~ie~~i~el~~~~~e~~~~V~~LE~qy 306 (351)
T 2wam_A 249 DYPAAAQALLE-----------QVAKTGSLQLPLAVLAEAAA-------EVQAKIDEQVQASAEVAQVVAALERQY 306 (351)
T ss_dssp CCHHHHHHHHH-----------HHHHHHTCCCCCHHHHHHHH-------HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-----------HHHHHHCCCCCHHHHHHHHH-------HHHHHHHHHHHhCHHHHHHHHHHHhhh
Confidence 56777776654 22233333333444444333 333444445566666666666666653
No 341
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=29.47 E-value=88 Score=21.07 Aligned_cols=24 Identities=33% Similarity=0.490 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 370 ILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
.|+..|..|....+.|..+|++||
T Consensus 5 alekkcaalesklqalekkleale 28 (31)
T 3ljm_A 5 ALEKKCAALESKLQALEKKLEALE 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555554
No 342
>2yo3_A General control protein GCN4, putative inner MEMB protein, general control protein...; HANS motif, YADA-like head, ylhead; 2.00A {Saccharomyces cerevisiae}
Probab=29.24 E-value=2.3e+02 Score=27.59 Aligned_cols=8 Identities=0% Similarity=-0.496 Sum_probs=3.4
Q ss_pred HHHHHHhh
Q 014879 407 LFYYLLLL 414 (416)
Q Consensus 407 ~~EvqrL~ 414 (416)
..||+|++
T Consensus 250 ~~~~~~~~ 257 (268)
T 2yo3_A 250 ENEIARIK 257 (268)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 34444443
No 343
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=29.08 E-value=1.7e+02 Score=29.92 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 358 QTEATTLSAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 358 qsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
++-......+|..|+..+........+|++.++.|+
T Consensus 97 ~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~ 132 (411)
T 3ghg_C 97 EASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLE 132 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444444444444444444443
No 344
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=28.29 E-value=85 Score=30.46 Aligned_cols=25 Identities=32% Similarity=0.337 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 372 QRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 372 qre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
+++...+..++.++.+-+++||+|.
T Consensus 242 e~~i~~l~~~~~e~~~~V~~LE~~~ 266 (319)
T 2p90_A 242 HRQLMEQTEESSEIQRVVGALEQQY 266 (319)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhh
Confidence 3333445555555555566666553
No 345
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=28.26 E-value=4.1e+02 Score=25.53 Aligned_cols=43 Identities=16% Similarity=0.232 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
++-|+.+-.....|...+-.+|+. |..--+.+..||..||+..
T Consensus 165 LelL~IRK~ma~sEI~EID~KI~~-------L~~mR~~vl~RLA~lEqdE 207 (242)
T 3uux_B 165 LEFLNIQKNSTLSEIRDIEVEVEN-------LRQKKEKLLGKIANIEQNQ 207 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHhhhH
Confidence 455556666555665555555554 4455556667777777763
No 346
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=28.18 E-value=2.9e+02 Score=23.87 Aligned_cols=30 Identities=30% Similarity=0.317 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 340 KERKMRYISELEQKVQTLQTEATTLSAQVT 369 (416)
Q Consensus 340 ReRKk~YleELE~KVq~LqsENs~Ls~Qlt 369 (416)
-++|++-..|+|++++.+..+...+...+.
T Consensus 56 E~kklqLkse~e~E~ae~k~KYD~~lqe~e 85 (115)
T 3vem_A 56 EEKKSILKAELERKMAEVQAEFRRKFHEVE 85 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355777777888887777666655544433
No 347
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=27.96 E-value=52 Score=25.49 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 367 QVTILQRDSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 367 Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQa 396 (416)
+|..|-.++..+..+.++|.+.|..++.|.
T Consensus 13 kI~~L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ 42 (64)
T 3t97_C 13 KITSLHREVEKVKLDQKRLDQELDFILSQQ 42 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455555555555544443
No 348
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.91 E-value=63 Score=32.61 Aligned_cols=21 Identities=29% Similarity=0.330 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSA 366 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~ 366 (416)
.|+++|.+++.++.....|..
T Consensus 26 ~i~~~~~~~~~~~~~~~~l~~ 46 (405)
T 4b4t_J 26 KIQETELKIRSKTENVRRLEA 46 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445555555554444433333
No 349
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=27.85 E-value=1.5e+02 Score=21.79 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
.++.||..+..||+.-+.|.++++..|.
T Consensus 6 kv~~Le~~ld~LqTr~ArLlae~~ssq~ 33 (46)
T 3swy_A 6 KVEQLGSSLDTLQTRFARLLAEYNATQM 33 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666666555443
No 350
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=27.74 E-value=1e+02 Score=24.23 Aligned_cols=42 Identities=26% Similarity=0.215 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLS-----AQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls-----~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
.|-.++..|..|...++ ++-+.|++++..|..|...|+..|+
T Consensus 10 ~l~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~ 56 (65)
T 3sja_C 10 AKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ 56 (65)
T ss_dssp HHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445555555555544 3455666666666666666555544
No 351
>1tu3_F RAB GTPase binding effector protein 1; rabaptin5, effector-binding, protein transport; HET: GNP; 2.31A {Homo sapiens} SCOP: h.1.27.2
Probab=27.57 E-value=49 Score=26.92 Aligned_cols=61 Identities=26% Similarity=0.261 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ---QAQLKDGINSFLLFYYL 411 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq---QaqLrdALnEaL~~Evq 411 (416)
.+.+.+|..+|+.|+.|..+- ..+|+++-.|.. .|..+|+.+.| ..|+|.-|+|.--..|.
T Consensus 11 e~~~~e~k~kv~~LQ~eLdts----E~VQrDFVkLSQ---sLQvqLE~IRqadt~~qvr~Il~e~~l~di~ 74 (79)
T 1tu3_F 11 EQLMFEEKNKAQRLQTELDVS----EQVQRDFVKLSQ---TLQVQLERIRQADSLERIRAILNDTKLTDIN 74 (79)
T ss_dssp ----------CHHHHHHHHHH----HHHHHHHHHHHH---HHHHHHHHHHTCCSHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH---HHHHHHHHHHhhhhHHHHHHHHccCccchHh
Confidence 344556666666666665443 445667666655 55556666655 46777777765444443
No 352
>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B
Probab=27.49 E-value=2.8e+02 Score=23.34 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 014879 357 LQTEATTLSAQVTILQ 372 (416)
Q Consensus 357 LqsENs~Ls~Qlt~Lq 372 (416)
|+.-+..|..+|..|+
T Consensus 47 L~e~~keLh~~I~~LE 62 (106)
T 1j1d_B 47 LREKAKELWQTIYNLE 62 (106)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334444444444433
No 353
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=27.10 E-value=2.2e+02 Score=27.97 Aligned_cols=72 Identities=22% Similarity=0.218 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Q 014879 335 SAARSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQA-MEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 335 SArRSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqa-LEqQaqLrdALnEaL~~EvqrL 413 (416)
-+++.-..|.+.++.|+..++..+. +..-..++..+ .....| .++.+.|+. +.++++|. +..+.|+.-++.|
T Consensus 320 ~~~~~~~~k~~~v~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~----~e~~~~~~~~~~~~~~~~-~q~~~~~~~~~~~ 392 (406)
T 4dyl_A 320 VATEMVFRRQEMVTQLQQELRNEEE-NTHPRERVQLL-GKRQVL----QEALQGLQVALCSQAKLQ-AQQELLQTKLEHL 392 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HSCTTCGGGGH-HHHHHH----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCcchHHHHH-hHHhhH----HHHHHHHHHHHhHHHHHH-HHHHHHHHHHHhc
Confidence 3444455566667777766665432 11111111111 111111 233333333 45556666 7777777766654
No 354
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=26.98 E-value=1.1e+02 Score=24.14 Aligned_cols=27 Identities=15% Similarity=0.002 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014879 388 RLQAMEQQAQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 388 RLqaLEqQaqLrdALnEaL~~EvqrL~ 414 (416)
++..||....-+|+++..|+.++.++.
T Consensus 26 ~I~eLE~~L~~kd~eI~eLr~~LdK~q 52 (67)
T 1zxa_A 26 RIKELEKRLSEKEEEIQELKRKLHKCQ 52 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555666666666666666553
No 355
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=26.88 E-value=31 Score=32.43 Aligned_cols=14 Identities=43% Similarity=0.586 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHH
Q 014879 379 TSENNELKFRLQAM 392 (416)
Q Consensus 379 ~sEN~ELK~RLqaL 392 (416)
..||++||+++..|
T Consensus 25 ~~eN~~Lk~e~~~l 38 (255)
T 2j5u_A 25 YTENQHLKERLEEL 38 (255)
T ss_dssp -CTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444333
No 356
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=26.47 E-value=1.2e+02 Score=23.83 Aligned_cols=45 Identities=7% Similarity=0.031 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 346 YISELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 346 YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
..+++..++..|+.|-.-...++..++--++....++..|..+|+
T Consensus 17 Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~~~l~~~I~ 61 (75)
T 3mtu_A 17 DKENALDRAEQAEADKDFYFGKLRNIELICQENEGENDPVLQRIV 61 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 345555666666666666666666655555554444444444443
No 357
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=26.40 E-value=2.4e+02 Score=22.35 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHH
Q 014879 381 ENNELKFRLQAMEQQ 395 (416)
Q Consensus 381 EN~ELK~RLqaLEqQ 395 (416)
....|..++..|+.+
T Consensus 78 ~~e~ie~~i~~le~~ 92 (117)
T 2zqm_A 78 KIETLEVRLNALERQ 92 (117)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333444444433
No 358
>3pik_A Cation efflux system protein CUSC; beta-barrel, lipoprotein, outer membrane; HET: UNL; 2.30A {Escherichia coli}
Probab=25.86 E-value=4.1e+02 Score=24.80 Aligned_cols=7 Identities=29% Similarity=0.648 Sum_probs=2.6
Q ss_pred HHHHhhc
Q 014879 176 LFNEYMN 182 (416)
Q Consensus 176 l~~~ym~ 182 (416)
+..+|.+
T Consensus 152 v~~ay~~ 158 (446)
T 3pik_A 152 VAQSYFN 158 (446)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 359
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=25.82 E-value=2.6e+02 Score=22.41 Aligned_cols=45 Identities=18% Similarity=0.137 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNELKFRLQAM 392 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaL 392 (416)
.||..+|..-+.|...|..-+..|.........-|+.|..+++-+
T Consensus 6 KeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~ 50 (74)
T 2q6q_A 6 KELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNL 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355556666666666555555555555555555555554444443
No 360
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=25.58 E-value=3.9e+02 Score=27.64 Aligned_cols=18 Identities=6% Similarity=-0.195 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 014879 396 AQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 396 aqLrdALnEaL~~EvqrL 413 (416)
.+.|...+.-|++.||+-
T Consensus 115 ~~~r~~~~~~lt~~vq~~ 132 (526)
T 2de0_X 115 GDWREKEAKDLTELVQRR 132 (526)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 455555555566666653
No 361
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=25.55 E-value=3.8e+02 Score=24.24 Aligned_cols=14 Identities=14% Similarity=0.259 Sum_probs=9.5
Q ss_pred ccccChHHHHhhhh
Q 014879 298 NGEFNDAELKKIWA 311 (416)
Q Consensus 298 ~g~~s~~e~kKi~~ 311 (416)
.+..+.+|+.+.+.
T Consensus 113 ~~~Ls~eei~~~~~ 126 (227)
T 1u00_A 113 SYGLTDSEIASMIK 126 (227)
T ss_dssp CSCCCHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH
Confidence 34578888877654
No 362
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=25.45 E-value=6.3e+02 Score=26.84 Aligned_cols=10 Identities=30% Similarity=0.584 Sum_probs=5.5
Q ss_pred Cccccccccc
Q 014879 288 GNLAKMSLEF 297 (416)
Q Consensus 288 g~~~~~~~e~ 297 (416)
+.+.-|-+.|
T Consensus 265 ~nthDAII~F 274 (551)
T 2b5u_A 265 GNTRDAVIRF 274 (551)
T ss_dssp TTEEEEEEEC
T ss_pred CCccceEEEC
Confidence 4444555666
No 363
>3d5k_A OPRM, outer membrane protein OPRM; channel, beta-alpha-barrel, antibiotic RES lipoprotein, palmitate, transmemb transport; 2.40A {Pseudomonas aeruginosa} PDB: 1wp1_A
Probab=25.19 E-value=4.5e+02 Score=25.02 Aligned_cols=23 Identities=17% Similarity=0.070 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTI 370 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~ 370 (416)
.++..+|...-.+......++..
T Consensus 363 ~~~~~~v~~a~~~~~~~~~~~~~ 385 (474)
T 3d5k_A 363 QTAFQEVADGLAARGTFTEQLQA 385 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444333333333333333
No 364
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=25.02 E-value=3.3e+02 Score=23.41 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSA 366 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~ 366 (416)
++.++..+..+...+..
T Consensus 47 ~~~~i~~l~~~i~~~~~ 63 (196)
T 1fio_A 47 LRHSLDNFVAQATDLQF 63 (196)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444333
No 365
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=24.99 E-value=2.4e+02 Score=23.38 Aligned_cols=41 Identities=10% Similarity=-0.085 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 014879 370 ILQRDSAGLTSENNELKFRLQAMEQQ-AQLKDGINSFLLFYYLLLL 414 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~RLqaLEqQ-aqLrdALnEaL~~EvqrL~ 414 (416)
..+.++..=..|-..++..|-.||++ .++| +.-.+||.||+
T Consensus 40 eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmK----q~YEeEI~rLr 81 (92)
T 3vp9_A 40 DYDFKMNQQLAEMQQIRNTVYERELTHRKMK----DAYEEEIKHLK 81 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 44444444445555555556556554 2333 33455666654
No 366
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=24.98 E-value=2e+02 Score=20.98 Aligned_cols=18 Identities=39% Similarity=0.473 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014879 370 ILQRDSAGLTSENNELKF 387 (416)
Q Consensus 370 ~Lqre~~~L~sEN~ELK~ 387 (416)
.|+.+...|..||..||.
T Consensus 7 qlenevaslenenetlkk 24 (49)
T 3he5_A 7 QLENEVASLENENETLKK 24 (49)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccHHHHH
Confidence 344555555566655543
No 367
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=24.87 E-value=3.7e+02 Score=25.32 Aligned_cols=19 Identities=16% Similarity=0.129 Sum_probs=12.0
Q ss_pred hHHHHhhhhhhhHhhhhcc
Q 014879 303 DAELKKIWANEKLAEIALS 321 (416)
Q Consensus 303 ~~e~kKi~~~~~LaElAl~ 321 (416)
..++++|+..-....+...
T Consensus 198 ~~~v~~il~s~~f~~~~~p 216 (357)
T 3rrk_A 198 LEAARSSLSRLGLAELRFP 216 (357)
T ss_dssp HHHHHHHHHTTTCCBCCCC
T ss_pred HHHHHHHHHHCCCeeccCC
Confidence 4567777777666666543
No 368
>1hs7_A Syntaxin VAM3; UP-and-DOWN three-helix bundle insertion preceding proline in AN alpha-helix, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=24.76 E-value=1.9e+02 Score=23.91 Aligned_cols=48 Identities=21% Similarity=0.311 Sum_probs=23.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQ-TLQTEATTLSAQVTILQR--DSAGLTSENNELKFRLQAMEQQA 396 (416)
Q Consensus 349 ELE~KVq-~LqsENs~Ls~Qlt~Lqr--e~~~L~sEN~ELK~RLqaLEqQa 396 (416)
+|..+|+ .|+.....|..++..|.. ....|+.+-.+|.-.+|++..++
T Consensus 37 ~LR~~l~~~l~~~~~~L~k~~~~l~~l~qkeRL~~dF~~l~~~fQ~~qr~y 87 (97)
T 1hs7_A 37 ELRYKIETELIPNCTSVRDKIESNILIHQNGKLSADFKNLKTKYQSLQQSY 87 (97)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHSTHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 4444444 444444444444443322 44455555555555555554433
No 369
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=24.39 E-value=1.3e+02 Score=23.22 Aligned_cols=11 Identities=9% Similarity=0.160 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 014879 379 TSENNELKFRL 389 (416)
Q Consensus 379 ~sEN~ELK~RL 389 (416)
..++.+|+.++
T Consensus 63 ~~~~~~L~~e~ 73 (80)
T 1hlo_A 63 RRKNHTHQQDI 73 (80)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 370
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=24.28 E-value=2.4e+02 Score=21.59 Aligned_cols=41 Identities=15% Similarity=0.340 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 365 SAQVTILQRDSAGLTSENNELKFRLQAMEQQAQLKDGINSFLLF 408 (416)
Q Consensus 365 s~Qlt~Lqre~~~L~sEN~ELK~RLqaLEqQaqLrdALnEaL~~ 408 (416)
-..+-.|.-+.+.|..||+.|+ +.||...+-|.-|...++.
T Consensus 9 VDtVYaLkDqV~eL~qe~k~m~---k~lEeEqkARk~LE~~vrk 49 (56)
T 2w6b_A 9 VDTVYALKDEVQELRQDNKKMK---KSLEEEQRARKDLEKLVRK 49 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 3334444445555555665553 3344444444444444443
No 371
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=24.26 E-value=21 Score=24.87 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQR 373 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqr 373 (416)
++.|..|++.|+.++..+..++..+++
T Consensus 6 i~avKkKiq~lq~q~d~aee~~~~~~~ 32 (37)
T 3azd_A 6 LEAVRRKIRSLQEQNYHLENEVARLKK 32 (37)
T ss_dssp CHHHHHHHHHHHHHTTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666555544
No 372
>4gif_A Polycystic kidney disease 2-like 1 protein; coiled-coil, trimer, Trp channel, transient receptor potenti channel, polycystic kidney disease (PKD); 2.80A {Homo sapiens}
Probab=24.26 E-value=1.9e+02 Score=21.24 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 359 TEATTLSAQVTILQRDSAGLTSENNELKFRLQAMEQ 394 (416)
Q Consensus 359 sENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLqaLEq 394 (416)
.|-..|..++-.|+.-..+++++...+-.+|..+|.
T Consensus 7 eeF~~L~rRVlqlE~~l~gI~S~idav~~Kl~~~Er 42 (45)
T 4gif_A 7 EEFYMLTRRVLQLETVLEGVVSQIDAVGSKLKMLER 42 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455667777777777777777777777666666553
No 373
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=24.18 E-value=3.1e+02 Score=22.83 Aligned_cols=14 Identities=29% Similarity=0.496 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEA 361 (416)
Q Consensus 348 eELE~KVq~LqsEN 361 (416)
.+|+.+++.|+.+.
T Consensus 50 ~eL~~EI~~L~~eI 63 (96)
T 1t3j_A 50 KHLEEEIARLSKEI 63 (96)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444433
No 374
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=24.12 E-value=2e+02 Score=26.36 Aligned_cols=17 Identities=6% Similarity=0.042 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEATTLSAQ 367 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Q 367 (416)
|+.|+.||.++..|..+
T Consensus 134 ertV~kLqkeiD~LEDe 150 (175)
T 3mud_A 134 LDTTAKNEKSIDDLEEK 150 (175)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444333333
No 375
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=24.03 E-value=1.7e+02 Score=20.71 Aligned_cols=8 Identities=38% Similarity=0.223 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 014879 378 LTSENNEL 385 (416)
Q Consensus 378 L~sEN~EL 385 (416)
|..+|.+|
T Consensus 13 Ll~~~~~L 20 (36)
T 1kd8_B 13 LKSKLWHL 20 (36)
T ss_dssp HHHHHHHH
T ss_pred HHHHhHHH
Confidence 33333333
No 376
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=23.89 E-value=3e+02 Score=22.60 Aligned_cols=14 Identities=14% Similarity=0.223 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTE 360 (416)
Q Consensus 347 leELE~KVq~LqsE 360 (416)
|.+|+..++.....
T Consensus 24 i~el~~ei~ke~~~ 37 (98)
T 2ke4_A 24 LEERSRELQKEVDQ 37 (98)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444443333
No 377
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=23.85 E-value=1.4e+02 Score=24.13 Aligned_cols=30 Identities=13% Similarity=0.158 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 347 ISELEQKVQTLQTEATTLSAQVTILQRDSA 376 (416)
Q Consensus 347 leELE~KVq~LqsENs~Ls~Qlt~Lqre~~ 376 (416)
+.+|...|..|+.|-.-...+|..++--|+
T Consensus 10 i~eLk~~ve~lEkERDFYF~KLRdIEiLcQ 39 (82)
T 3tq7_B 10 LVDLKLTVDGLEKERDFYFSKLRDIELICQ 39 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555444443333
No 378
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=23.82 E-value=2.1e+02 Score=25.01 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 339 SKERKMRYISELEQKVQTLQTEATTLSAQVTILQ 372 (416)
Q Consensus 339 SReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lq 372 (416)
.++-+..-+++|..+|..|+.+...|..++..++
T Consensus 55 ~k~aeLe~leeL~~ki~eL~~kvA~le~e~~~~e 88 (125)
T 2pms_C 55 AKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAE 88 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3444444556677777777777777766666544
No 379
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=23.70 E-value=2.8e+02 Score=23.98 Aligned_cols=31 Identities=13% Similarity=0.237 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHh
Q 014879 383 NELKFRLQAMEQQA-------------QLKDGINSFLLFYYLLL 413 (416)
Q Consensus 383 ~ELK~RLqaLEqQa-------------qLrdALnEaL~~EvqrL 413 (416)
+.++.+|+.|++.. +++.....+|...++.+
T Consensus 95 ~~ik~~Lk~l~~~~~~~~~~~~~s~~~Rir~~q~~~L~~kf~~~ 138 (180)
T 1s94_A 95 NKVRGKLKTIELNIEQEEHSNKSSADLRIRKTQYSTISRKFVEV 138 (180)
T ss_dssp HHHHHHHHHHHHHHHHTC-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666532 45555556665555443
No 380
>1tu3_F RAB GTPase binding effector protein 1; rabaptin5, effector-binding, protein transport; HET: GNP; 2.31A {Homo sapiens} SCOP: h.1.27.2
Probab=23.57 E-value=1.1e+02 Score=24.82 Aligned_cols=22 Identities=14% Similarity=0.001 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 356 TLQTEATTLSAQVTILQRDSAG 377 (416)
Q Consensus 356 ~LqsENs~Ls~Qlt~Lqre~~~ 377 (416)
.|+..+..+..++..||.+...
T Consensus 9 ~Le~~~~e~k~kv~~LQ~eLdt 30 (79)
T 1tu3_F 9 TVEQLMFEEKNKAQRLQTELDV 30 (79)
T ss_dssp ------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555544443
No 381
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=23.46 E-value=2.9e+02 Score=22.18 Aligned_cols=27 Identities=11% Similarity=0.314 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATTLSAQVTILQRDSA 376 (416)
Q Consensus 350 LE~KVq~LqsENs~Ls~Qlt~Lqre~~ 376 (416)
|+.-+.........++.+|..|++.+.
T Consensus 52 l~~l~~~i~~~a~~ik~~Lk~l~~~~~ 78 (127)
T 1ez3_A 52 LEELMSDIKKTANKVRSKLKSIEQSIE 78 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444444554444443
No 382
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=23.42 E-value=56 Score=23.02 Aligned_cols=18 Identities=28% Similarity=0.392 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014879 352 QKVQTLQTEATTLSAQVT 369 (416)
Q Consensus 352 ~KVq~LqsENs~Ls~Qlt 369 (416)
.||..|+.+|..|..++.
T Consensus 20 dkVR~LE~~N~~Le~~i~ 37 (39)
T 1gk7_A 20 DKVRFLEQQNKILLAELE 37 (39)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467777777777776664
No 383
>1hwt_C Protein (heme activator protein); transcription factor, asymmetry, GAL4, complex activator/DNA, gene regulation/DNA complex; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 2hap_C* 1qp9_A* 1pyc_A
Probab=23.30 E-value=31 Score=25.93 Aligned_cols=22 Identities=18% Similarity=0.380 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014879 343 KMRYISELEQKVQTLQTEATTL 364 (416)
Q Consensus 343 Kk~YleELE~KVq~LqsENs~L 364 (416)
+..|++.|+.+|+.|+.....|
T Consensus 56 ~~~~~~~L~~ri~~LE~~l~~l 77 (81)
T 1hwt_C 56 KDNELKKLRERVKSLEKTLSKV 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHTTC---
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999999887665544
No 384
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=23.21 E-value=1.7e+02 Score=21.30 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTS 380 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s 380 (416)
++|=+++...-.|.+.-..+|+.||.....|..
T Consensus 5 ~~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee 37 (42)
T 2l5g_B 5 EELIQNMDRVDREITMVEQQISKLKKKQQQLEE 37 (42)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777777777777777766666544
No 385
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=22.98 E-value=3.1e+02 Score=22.58 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 365 SAQVTILQRDSAGLTSENNELKFRLQAME 393 (416)
Q Consensus 365 s~Qlt~Lqre~~~L~sEN~ELK~RLqaLE 393 (416)
..+|..+...+..|..+...|...|..++
T Consensus 61 ~~~L~e~~~kid~L~~el~K~q~~L~e~e 89 (98)
T 2ke4_A 61 EPQIAETLSNIERLKLEVQKYEAWLAEAE 89 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444444444444444444444443
No 386
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=22.88 E-value=82 Score=26.52 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 014879 335 SAARSKERKMRYISELEQKVQ 355 (416)
Q Consensus 335 SArRSReRKk~YleELE~KVq 355 (416)
+.++-|.+=...+.+|..-|=
T Consensus 34 ~ERrRR~~In~~~~~L~~lvP 54 (118)
T 4ati_A 34 IERRRRFNINDRIKELGTLIP 54 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 344444444455566555444
No 387
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=22.73 E-value=29 Score=23.54 Aligned_cols=24 Identities=25% Similarity=0.468 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTIL 371 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~L 371 (416)
.-||+|+..|+.....-..++..|
T Consensus 3 aaleqkiaaleqkcaaceqkiaal 26 (32)
T 4g1a_A 3 AALEQKIAALEQKCAACEQKIAAL 26 (32)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555544444444433
No 388
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=22.52 E-value=34 Score=24.73 Aligned_cols=12 Identities=42% Similarity=0.789 Sum_probs=10.7
Q ss_pred hhhhHHHHHhhc
Q 014879 171 DVADDLFNEYMN 182 (416)
Q Consensus 171 e~~~dl~~~ym~ 182 (416)
.++-|||++||+
T Consensus 26 qALQdLlseY~~ 37 (40)
T 4e17_B 26 QALQDLLSEYMG 37 (40)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 578999999996
No 389
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=22.45 E-value=2.9e+02 Score=25.68 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 340 KERKMRYISELEQKVQTLQTEATTLSAQVT 369 (416)
Q Consensus 340 ReRKk~YleELE~KVq~LqsENs~Ls~Qlt 369 (416)
++||.+-|+-|.+|+..|+.|-..|...+.
T Consensus 14 ~~Kk~ELi~~L~~kL~~L~~eqe~l~ee~~ 43 (190)
T 3thf_A 14 KQKMDELIKHLNQKIVSLKREQQTISEECS 43 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777776666655443
No 390
>4aj5_K Spindle and kinetochore-associated protein 2; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=22.36 E-value=1.9e+02 Score=25.20 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 360 EATTLSAQVTILQRDSAGLTSENNELKFRLQ 390 (416)
Q Consensus 360 ENs~Ls~Qlt~Lqre~~~L~sEN~ELK~RLq 390 (416)
+...+..++..|..++..+..|.++++.++.
T Consensus 51 ~LsaIk~ry~~L~~q~~~iaaeQke~~d~ir 81 (123)
T 4aj5_K 51 ELSVIKSRYQTLYARFKPVAVEQKESKSRIC 81 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444445555555544443
No 391
>1m5i_A APC protein; coiled-coil, antitumor protein; 2.00A {Homo sapiens} SCOP: h.4.13.1
Probab=22.25 E-value=3.4e+02 Score=23.69 Aligned_cols=24 Identities=25% Similarity=0.083 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 014879 390 QAMEQQAQLKDGINSFLLFYYLLL 413 (416)
Q Consensus 390 qaLEqQaqLrdALnEaL~~EvqrL 413 (416)
+.|++-+|+|-+-.+.+..|+.++
T Consensus 83 deM~qRaQiRv~r~qqIe~eil~i 106 (125)
T 1m5i_A 83 QDMEKRAQRRIARIQQIEKDILRI 106 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH
Confidence 557778888877777777776554
No 392
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=21.88 E-value=81 Score=29.26 Aligned_cols=24 Identities=29% Similarity=0.310 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 344 MRYISELEQKVQTLQTEATTLSAQ 367 (416)
Q Consensus 344 k~YleELE~KVq~LqsENs~Ls~Q 367 (416)
...+.+|+.+..+|+.||..|..+
T Consensus 160 L~~i~~L~a~N~hLqkENeRL~~e 183 (186)
T 3q4f_C 160 LDTIAENQAKNEHLQKENERLLRD 183 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
No 393
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=21.81 E-value=2.9e+02 Score=21.65 Aligned_cols=17 Identities=24% Similarity=0.188 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 372 QRDSAGLTSENNELKFR 388 (416)
Q Consensus 372 qre~~~L~sEN~ELK~R 388 (416)
+.....|..+...+|..
T Consensus 32 q~~i~~lE~eL~~~r~e 48 (84)
T 1gk4_A 32 QDTIGRLQDEIQNMKEE 48 (84)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333344444444333
No 394
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=21.68 E-value=6e+02 Score=25.19 Aligned_cols=7 Identities=14% Similarity=-0.164 Sum_probs=2.6
Q ss_pred HHHHHHh
Q 014879 407 LFYYLLL 413 (416)
Q Consensus 407 ~~EvqrL 413 (416)
+-|+.+|
T Consensus 246 kp~l~ql 252 (373)
T 3hhm_B 246 KPDLIQL 252 (373)
T ss_dssp HHHHHHH
T ss_pred ChHHHHH
Confidence 3333333
No 395
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=21.44 E-value=4.5e+02 Score=24.77 Aligned_cols=30 Identities=13% Similarity=0.304 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 345 RYISELEQKVQTLQTEATTLSAQVTILQRD 374 (416)
Q Consensus 345 ~YleELE~KVq~LqsENs~Ls~Qlt~Lqre 374 (416)
+.+.+|+.+++.|+.+...+..++..+..+
T Consensus 226 ~~l~~l~~~i~~l~~~l~~~~~~l~~~~~~ 255 (357)
T 3rrk_A 226 KAAARMKERARLAPEELVGIREEVARLSRE 255 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666666666655555555544433
No 396
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=21.37 E-value=1.5e+02 Score=21.56 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHHH
Q 014879 350 LEQKVQTLQTEATT 363 (416)
Q Consensus 350 LE~KVq~LqsENs~ 363 (416)
||.+++.|+.....
T Consensus 25 leselqalekklaa 38 (48)
T 1g6u_A 25 LESELQALEKKLAA 38 (48)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 397
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=21.37 E-value=1.3e+02 Score=21.02 Aligned_cols=17 Identities=6% Similarity=-0.003 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 371 LQRDSAGLTSENNELKF 387 (416)
Q Consensus 371 Lqre~~~L~sEN~ELK~ 387 (416)
|+..+..|..+|.+|..
T Consensus 6 LEdKVEeLl~~~~~Le~ 22 (34)
T 3c3f_A 6 IEXKLEXILSXLYHXEN 22 (34)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHH
Confidence 33444444455554433
No 398
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=21.31 E-value=2.7e+02 Score=28.73 Aligned_cols=14 Identities=21% Similarity=0.456 Sum_probs=7.3
Q ss_pred ccccChHHHHhhhh
Q 014879 298 NGEFNDAELKKIWA 311 (416)
Q Consensus 298 ~g~~s~~e~kKi~~ 311 (416)
.+..+.+|+.+.+.
T Consensus 504 ~~~ls~~~i~~~~~ 517 (605)
T 2kho_A 504 SSGLNEDEIQKMVR 517 (605)
T ss_dssp TSSCCHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH
Confidence 34455666655443
No 399
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=21.09 E-value=1.9e+02 Score=24.58 Aligned_cols=38 Identities=13% Similarity=0.244 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 348 SELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 348 eELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
+.|+.+++.|+.....|..++..++.+...+....+++
T Consensus 101 ~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l 138 (151)
T 2zdi_C 101 SFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEV 138 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666666666555555555544444
No 400
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=21.06 E-value=5.1e+02 Score=25.79 Aligned_cols=82 Identities=15% Similarity=0.233 Sum_probs=0.0
Q ss_pred hhccCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH
Q 014879 318 IALSDPKRAKRILANRQSAA-RSKERKMRYISELEQKVQTLQTEATTLSAQVTILQRDSAGLTS------ENNELKFRLQ 390 (416)
Q Consensus 318 lAl~DpKR~KRiLkNRESAr-RSReRKk~YleELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~s------EN~ELK~RLq 390 (416)
+.+.++...+++|-.-.... ............+..+...+..+......++..++.+...+.. |-.+|...+.
T Consensus 158 ~~l~~~~~rr~~LD~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~l~~ql~ei~~~~l~~~E~e~L~~~~~ 237 (517)
T 4ad8_A 158 VSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQASQRERARQIDLLAFQVQEISEVSPDPGEEEGLNTELS 237 (517)
T ss_dssp GTTTSHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSCHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHH
Q ss_pred HHHHHHHHH
Q 014879 391 AMEQQAQLK 399 (416)
Q Consensus 391 aLEqQaqLr 399 (416)
.|.....+.
T Consensus 238 ~L~~~~~~~ 246 (517)
T 4ad8_A 238 RLSNLHESS 246 (517)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHHH
No 401
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=20.99 E-value=2.5e+02 Score=20.62 Aligned_cols=16 Identities=13% Similarity=0.038 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 014879 397 QLKDGINSFLLFYYLL 412 (416)
Q Consensus 397 qLrdALnEaL~~Evqr 412 (416)
++++-+.|||+.|+.|
T Consensus 26 K~K~EIIeAi~~El~~ 41 (45)
T 1use_A 26 KVKEEIIEAFVQELRK 41 (45)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4466778888888875
No 402
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=20.92 E-value=3.4e+02 Score=22.09 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014879 349 ELEQKVQTLQTEATTLSAQVTILQRDSAGLTSENNEL 385 (416)
Q Consensus 349 ELE~KVq~LqsENs~Ls~Qlt~Lqre~~~L~sEN~EL 385 (416)
.+...+..|+.+...++..++...++++.|+.-.-.|
T Consensus 41 ~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~L 77 (95)
T 3mov_A 41 NSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLAL 77 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444443333
No 403
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=20.91 E-value=1.5e+02 Score=21.91 Aligned_cols=17 Identities=24% Similarity=0.335 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014879 351 EQKVQTLQTEATTLSAQ 367 (416)
Q Consensus 351 E~KVq~LqsENs~Ls~Q 367 (416)
|+.|+.|+.+...|..+
T Consensus 11 ERsV~KLek~ID~LEde 27 (52)
T 2z5i_A 11 ENEVARLKKLVDDLEDE 27 (52)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444444333
No 404
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=20.76 E-value=2.9e+02 Score=25.09 Aligned_cols=9 Identities=33% Similarity=0.593 Sum_probs=3.2
Q ss_pred HHHHHHHHH
Q 014879 351 EQKVQTLQT 359 (416)
Q Consensus 351 E~KVq~Lqs 359 (416)
|...+.|+.
T Consensus 69 e~~~~~L~~ 77 (174)
T 2p22_A 69 EQTMHSLNA 77 (174)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
Done!