Your job contains 1 sequence.
>014882
MQRRILSQISQSAKLNFRFTQNFFLFSSNETQSPNLNGGGDDPLYSDVPKPRRDKSERKP
YPTPMKVLIRRAKEERESRKAEPVKLLEHPPGNGLLVPELVSVAHQVYRARLSLLYGLSK
LIQFIPVQRCRFCSEVHIGHVGHEIRTCTGPKSGFRSATHVWRKGGVGDAVFFPKCFHLH
DRVGKARVVHDERHSVPRIPAIVELCIQAGVDIEKYPTKRRTKPVYSVEGRIVDFESVVE
NDEMEKHVLDSYLGAKIDEMERSSKCERMDQSNDVEGANLREVSIRTLASWFEMISGAKE
MMEKYTVWTCGYCPEVQVGPKGHKVRMCKASKHQSRDGMHAWQEATMDDLVGPNYVWHVQ
DLNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVPPERDEVDLVA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014882
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156151 - symbol:APO3 "ACCUMULATION OF PHOTOSY... 1310 1.1e-133 1
TAIR|locus:2010906 - symbol:APO1 "ACCUMULATION OF PHOTOSY... 780 1.6e-77 1
TAIR|locus:2093069 - symbol:APO4 "AT3G21740" species:3702... 248 8.7e-42 2
>TAIR|locus:2156151 [details] [associations]
symbol:APO3 "ACCUMULATION OF PHOTOSYSTEM ONE 3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR023342 Pfam:PF05634 PROSITE:PS51499 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003723 EMBL:AB022212
EMBL:AF370553 EMBL:BT002086 IPI:IPI00524364 RefSeq:NP_001119475.1
RefSeq:NP_568945.2 UniGene:At.55672 UniGene:At.7885
EnsemblPlants:AT5G61930.1 EnsemblPlants:AT5G61930.2 GeneID:836314
KEGG:ath:AT5G61930 TAIR:At5g61930 eggNOG:NOG286945
HOGENOM:HOG000239455 InParanoid:Q9FH50 OMA:SMMRLDV PhylomeDB:Q9FH50
ProtClustDB:PLN00111 Genevestigator:Q9FH50 GermOnline:AT5G61930
Uniprot:Q9FH50
Length = 402
Score = 1310 (466.2 bits), Expect = 1.1e-133, P = 1.1e-133
Identities = 254/417 (60%), Positives = 307/417 (73%)
Query: 1 MQRRILSQISQSAKLNFRFTQNFFLFSSNETQSPNLNGGGDDPLYSDVPKPRRDKSERKP 60
MQRR L +IS F+ + ++ + N +DPLY+DVPKP +DKSERKP
Sbjct: 1 MQRRKLVEISIFVIRKSNFSSSIKSLTNLDVDVSVDND--EDPLYADVPKPPKDKSERKP 58
Query: 61 YPTPMKVLIXXXXXXXXXXXXXPVKLLEHPPGNGLLVPELVSVAHQVYRARLSLLYGLSK 120
YPTPMK LI P ++LE PP NGLLVPELV VAH V+R R LL GLSK
Sbjct: 59 YPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAHCVHRCRNMLLSGLSK 118
Query: 121 LIQFIPVQRCRFCSEVHIGHVGHEIRTCTGPKSGFRSATHVWRKGGVGDAVFFPKCFHLH 180
+I +PV RCR C+EVHIG GHEIRTCTGP SG RSATHVW++G V D V FPKCFHL+
Sbjct: 119 IIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRGRVSDVVLFPKCFHLY 178
Query: 181 DRVGKARVVHDERHSVPRIPAIVELCIQAGVDIEKYPTKRRTKPVYSVEGRIVDFESVVE 240
DR K RV+HDER +VP+I A++ELCIQAGVD+EK+P+KRR+KPVYS+EGRIVDFE V
Sbjct: 179 DRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPVYSIEGRIVDFEDV-- 236
Query: 241 NDEMEKHVLDSYLGAKIDEMERSSKCERMDQSNDVEGANLREVSIRTLASWFEMISGAKE 300
ND + + S I E +R C+ E +L+E+S T+ SWFEM+ G ++
Sbjct: 237 NDGNSELAVTSTT-TLIQEDDR---CKE-------EKKSLKELSFETMESWFEMVLGVRK 285
Query: 301 MMEKYTVWTCGYCPEVQVGPKGHKVRMCKASKHQSRDGMHAWQEATMDDLVGPNYVWHVQ 360
+ME+Y VWTCGYCPE+QVGPKGHKVRMCKA+KHQ RDGMHAWQEAT+DD+VGP YVWHV+
Sbjct: 286 LMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGPTYVWHVR 345
Query: 361 D-LNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVPPERDEVDLVA 416
D +G L+N+LKR+YGKAPAV+E+CV GGAPVPDQY SMMRLDVV P+RDEVDLVA
Sbjct: 346 DPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYPQRDEVDLVA 402
>TAIR|locus:2010906 [details] [associations]
symbol:APO1 "ACCUMULATION OF PHOTOSYSTEM ONE 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0015979
"photosynthesis" evidence=IMP] [GO:0000373 "Group II intron
splicing" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] InterPro:IPR023342
Pfam:PF05634 PROSITE:PS51499 EMBL:CP002684 GO:GO:0009507
GO:GO:0008270 GO:GO:0009658 GO:GO:0003723 GO:GO:0010468
GO:GO:0015979 GO:GO:0000373 IPI:IPI00657498 RefSeq:NP_001031234.1
UniGene:At.28084 EnsemblPlants:AT1G64810.2 GeneID:842789
KEGG:ath:AT1G64810 OMA:GYCSEVH Uniprot:F4I896
Length = 460
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 154/370 (41%), Positives = 224/370 (60%)
Query: 47 DVPKPRRDKSERKPYPTPMKVLIXXXXXXXXXXXXXPVKLLEHPPGNGLLVPELVSVAHQ 106
D+P P K+++KPYP P K + K L+ PP NGLLVP LV VA Q
Sbjct: 99 DLP-PILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLD-PPKNGLLVPNLVPVADQ 156
Query: 107 VYRARLSLLYGLSKLIQFIPVQRCRFCSEVHIGHVGHEIRTCTGPKSGFRSATHVWRKGG 166
V L+ GL++L+ +PV C C VH+ +VGH IR C GP + R +H W KG
Sbjct: 157 VIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKGT 216
Query: 167 VGDAVFFPKCFHLHDRVGKARVVHDERHSVPRIPAIVELCIQAGVDIEKYPTKRRTKPVY 226
+ D + + +H++D G+ R+ H+ R RIPA+VELCIQAGV+I +YP +RRT+P+
Sbjct: 217 INDVLIPVESYHMYDPFGR-RIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPIR 275
Query: 227 SVEGRIVDFESVVENDEMEKHVLDSYLGAKIDEMERSSKCERMDQSNDVEGANLREVSIR 286
+ R++D + E EK S L + + E++ ER + + +++
Sbjct: 276 MMGKRVIDRGGY--HKEPEKPQTSSSLSSPLAELDTLGVFERYPPPTPED---IPKIAQE 330
Query: 287 TLASWFEMISGAKEMMEKYTVWTCGYCPEVQVGPKGHKVRMCKASKHQSRDGMHAWQEAT 346
T+ ++ ++ G ++M K+TV CGYC EV VGP GH V++C KHQ RDG H WQ+A
Sbjct: 331 TMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDAL 390
Query: 347 MDDLVGPNYVWHVQDLNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRSMMRLDVVP 406
+D++ PNYVWHV+DL G L L+R+YGKAPA+VE+C+H GA VP +Y++MMRLD++
Sbjct: 391 VDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIV 450
Query: 407 PERDEVDLVA 416
P+ E D+VA
Sbjct: 451 PDSQEADMVA 460
>TAIR|locus:2093069 [details] [associations]
symbol:APO4 "AT3G21740" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR023342 Pfam:PF05634
PROSITE:PS51499 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AB025634
HOGENOM:HOG000239455 ProtClustDB:PLN00111 EMBL:AK117492
IPI:IPI00528990 RefSeq:NP_188811.2 UniGene:At.38002 STRING:Q9LSZ0
PRIDE:Q9LSZ0 EnsemblPlants:AT3G21740.1 GeneID:821728
KEGG:ath:AT3G21740 TAIR:At3g21740 eggNOG:NOG236236
InParanoid:Q9LSZ0 OMA:GHKARLC PhylomeDB:Q9LSZ0
Genevestigator:Q9LSZ0 GermOnline:AT3G21740 Uniprot:Q9LSZ0
Length = 337
Score = 248 (92.4 bits), Expect = 8.7e-42, Sum P(2) = 8.7e-42
Identities = 48/123 (39%), Positives = 71/123 (57%)
Query: 279 NLREVSIRTLASWFEMISGAKEMMEKYTVWTCGYCPEVQVGPKGHKVRMCKASKHQSRDG 338
+L+ V L +W ++ +G K+++ Y C C EV VGP GHK R+C K++S G
Sbjct: 198 DLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRG 257
Query: 339 MHAWQEATMDDLVGPNYVWHVQDLNGPALENTLKRYYGKAPAVVELCVHGGAPVPDQYRS 398
H W++A ++DLV VWH + + L + + YYG APA+V LC H GA VP +Y
Sbjct: 258 THYWEKAGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYAC 317
Query: 399 MMR 401
M+
Sbjct: 318 KMK 320
Score = 217 (81.4 bits), Expect = 8.7e-42, Sum P(2) = 8.7e-42
Identities = 43/114 (37%), Positives = 65/114 (57%)
Query: 97 VPELVSVAHQVYRARLSLLYGLSKLIQFIPVQRCRFCSEVHIGHVGHEIRTCTGPKSGFR 156
V E+V VA ++ AR +L+ ++ L++ PV C+FCSEV +G GH I TC
Sbjct: 55 VKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGN 114
Query: 157 SATHVWRKGGVGDAVFFPKCFHLHDRVGKARVVHDERHSVPRIPAIVELCIQAG 210
+ H W G + D + + +HLH+ + + + H ER R+PAI+ELC QAG
Sbjct: 115 NRLHEWVPGSINDILVPVESYHLHN-ISQGVIRHQERFDYDRVPAILELCCQAG 167
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 34/143 (23%), Positives = 76/143 (53%)
Query: 256 KIDEME--RSSKCERMD-QSNDVEGANLREVSIRTLASWFEMISGAKEMMEKYTVWTCGY 312
K+D++ R +R++ ++ D + V+ L + +IS +++ + V TC +
Sbjct: 31 KLDDLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKF 90
Query: 313 CPEVQVGPKGHKVRMCKASKHQSRDGMHAWQEATMDDLVGPNYVWHVQDLNGPALENTLK 372
C EV VG +GH + C++ + + +H W +++D++ P +H+ +++ + + +
Sbjct: 91 CSEVFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQER 150
Query: 373 RYYGKAPAVVELCVHGGAPVPDQ 395
Y + PA++ELC GA P++
Sbjct: 151 FDYDRVPAILELCCQAGAIHPEE 173
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 42/124 (33%), Positives = 58/124 (46%)
Query: 117 GLSKLIQFIPVQRCRFCSEVHIGHVGHEIRTCTGPKSGFRSATHVWRKGGVGDAVFFPKC 176
G+ KL+ P + C+ C EVH+G GH+ R C K TH W K GV D V P+
Sbjct: 216 GVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAGVNDLV--PEK 273
Query: 177 FHLHDRVGKARVVHDERHSV-PRIPAIVELCIQAGVDIE-KYPTKRRTKPV-YSVEGRIV 233
H R V+ DE S PAIV LC G + KY K + + + +S +
Sbjct: 274 MVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQGLSFSFTNPVP 333
Query: 234 DFES 237
+ E+
Sbjct: 334 NLET 337
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 403 0.00099 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 616 (65 KB)
Total size of DFA: 282 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.44u 0.09s 32.53t Elapsed: 00:00:01
Total cpu time: 32.44u 0.09s 32.53t Elapsed: 00:00:01
Start: Tue May 21 00:09:33 2013 End: Tue May 21 00:09:34 2013