Query 014883
Match_columns 416
No_of_seqs 305 out of 1956
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 19:31:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014883.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014883hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 2.5E-50 8.6E-55 399.8 35.4 351 19-416 17-377 (475)
2 1vg0_A RAB proteins geranylger 100.0 2.6E-47 9.1E-52 388.0 36.8 362 20-416 6-500 (650)
3 2bcg_G Secretory pathway GDP d 100.0 3.1E-38 1.1E-42 315.6 34.9 350 20-416 9-361 (453)
4 1d5t_A Guanine nucleotide diss 100.0 7.8E-37 2.7E-41 303.6 33.8 344 20-416 4-350 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 1.1E-32 3.8E-37 278.9 24.6 335 23-416 2-367 (501)
6 1s3e_A Amine oxidase [flavin-c 99.9 1.4E-26 4.9E-31 235.3 23.4 295 20-378 2-307 (520)
7 2yg5_A Putrescine oxidase; oxi 99.9 1.1E-25 3.9E-30 224.6 20.5 293 20-377 3-306 (453)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 2.4E-25 8.2E-30 223.8 22.0 288 22-379 16-332 (478)
9 3ka7_A Oxidoreductase; structu 99.9 1.8E-24 6.2E-29 214.0 26.3 276 23-377 1-293 (425)
10 2vvm_A Monoamine oxidase N; FA 99.9 4E-25 1.4E-29 223.2 20.3 295 23-376 40-349 (495)
11 3nrn_A Uncharacterized protein 99.9 1E-24 3.5E-29 215.7 22.0 274 23-376 1-280 (421)
12 3nks_A Protoporphyrinogen oxid 99.9 1.4E-24 4.7E-29 218.1 18.3 295 23-382 3-331 (477)
13 3lov_A Protoporphyrinogen oxid 99.9 3.3E-24 1.1E-28 215.3 20.9 301 20-389 2-334 (475)
14 3i6d_A Protoporphyrinogen oxid 99.9 2.5E-24 8.6E-29 215.5 18.0 297 22-388 5-335 (470)
15 1sez_A Protoporphyrinogen oxid 99.9 8.1E-24 2.8E-28 214.1 21.7 296 20-377 11-346 (504)
16 4gde_A UDP-galactopyranose mut 99.9 8.6E-24 2.9E-28 214.2 16.9 293 22-388 10-322 (513)
17 1rsg_A FMS1 protein; FAD bindi 99.9 6.4E-23 2.2E-27 208.1 18.1 282 20-380 6-309 (516)
18 3k7m_X 6-hydroxy-L-nicotine ox 99.9 3.1E-21 1.1E-25 191.2 20.4 287 23-377 2-297 (431)
19 1b37_A Protein (polyamine oxid 99.9 2.7E-21 9.2E-26 194.0 18.8 288 21-379 3-312 (472)
20 4dsg_A UDP-galactopyranose mut 99.9 1.5E-21 5.2E-26 196.2 16.7 315 21-415 8-345 (484)
21 2iid_A L-amino-acid oxidase; f 99.9 3.8E-21 1.3E-25 194.2 16.4 283 21-376 32-335 (498)
22 2b9w_A Putative aminooxidase; 99.8 5E-20 1.7E-24 182.1 18.8 244 21-333 5-253 (424)
23 2jae_A L-amino acid oxidase; o 99.8 3.7E-20 1.2E-24 186.6 17.2 303 20-376 9-331 (489)
24 4gut_A Lysine-specific histone 99.8 1.5E-17 5.1E-22 174.9 19.6 276 20-377 334-625 (776)
25 2e1m_A L-glutamate oxidase; L- 99.8 2.2E-17 7.7E-22 159.2 18.5 240 20-308 42-346 (376)
26 2z3y_A Lysine-specific histone 99.7 2.1E-16 7.1E-21 164.6 21.8 102 270-379 392-502 (662)
27 1v0j_A UDP-galactopyranose mut 99.7 1.7E-18 6E-23 169.7 5.4 231 20-333 5-244 (399)
28 3ayj_A Pro-enzyme of L-phenyla 99.7 1.2E-17 4.2E-22 172.2 11.3 105 271-377 339-493 (721)
29 2xag_A Lysine-specific histone 99.7 3.8E-16 1.3E-20 165.3 22.9 103 269-379 562-673 (852)
30 1i8t_A UDP-galactopyranose mut 99.7 1.3E-17 4.4E-22 161.7 7.8 223 22-333 1-230 (367)
31 2bi7_A UDP-galactopyranose mut 99.7 6.3E-17 2.2E-21 157.7 8.7 215 21-306 2-224 (384)
32 3hdq_A UDP-galactopyranose mut 99.7 1.2E-16 4.1E-21 155.4 10.0 211 19-304 26-245 (397)
33 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 7E-15 2.4E-19 140.9 19.2 100 271-376 104-204 (342)
34 3dme_A Conserved exported prot 99.4 3E-12 1E-16 123.2 12.6 60 272-333 140-204 (369)
35 3dje_A Fructosyl amine: oxygen 99.4 1.5E-11 5E-16 121.7 17.5 61 271-333 149-216 (438)
36 1yvv_A Amine oxidase, flavin-c 99.3 2.7E-11 9.1E-16 115.3 16.8 94 272-378 103-198 (336)
37 3ps9_A TRNA 5-methylaminomethy 99.3 4.2E-11 1.4E-15 125.1 15.5 59 271-332 406-467 (676)
38 3nyc_A D-arginine dehydrogenas 99.3 5.9E-11 2E-15 114.8 14.8 59 271-333 143-204 (381)
39 3kkj_A Amine oxidase, flavin-c 99.2 8E-12 2.7E-16 114.1 5.1 47 22-68 2-48 (336)
40 4at0_A 3-ketosteroid-delta4-5a 99.2 6.7E-10 2.3E-14 112.1 19.1 42 21-62 40-81 (510)
41 3v76_A Flavoprotein; structura 99.2 1.4E-10 4.9E-15 113.8 13.2 58 271-332 124-181 (417)
42 2gag_B Heterotetrameric sarcos 99.2 2.8E-10 9.4E-15 111.1 15.1 60 271-333 163-225 (405)
43 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.4E-10 5E-15 115.0 12.9 59 272-332 126-185 (447)
44 3pvc_A TRNA 5-methylaminomethy 99.2 3.3E-10 1.1E-14 118.5 16.2 59 271-332 401-463 (689)
45 1y56_B Sarcosine oxidase; dehy 99.2 7.4E-10 2.5E-14 107.3 17.1 60 271-333 138-200 (382)
46 1qo8_A Flavocytochrome C3 fuma 99.1 2.8E-09 9.6E-14 108.9 19.6 59 272-332 240-306 (566)
47 1y0p_A Fumarate reductase flav 99.1 5E-09 1.7E-13 107.2 21.4 53 279-332 255-311 (571)
48 3nlc_A Uncharacterized protein 99.1 6.8E-10 2.3E-14 112.2 13.9 53 279-333 220-272 (549)
49 1pj5_A N,N-dimethylglycine oxi 99.1 2.3E-09 7.9E-14 114.5 17.5 60 271-333 140-202 (830)
50 3axb_A Putative oxidoreductase 99.0 2E-09 6.7E-14 106.8 13.1 52 279-333 181-249 (448)
51 1d4d_A Flavocytochrome C fumar 99.0 3.5E-08 1.2E-12 100.9 19.9 52 279-332 255-311 (572)
52 3oz2_A Digeranylgeranylglycero 98.9 4.3E-10 1.5E-14 109.0 5.1 42 20-61 2-43 (397)
53 3fpz_A Thiazole biosynthetic e 98.8 2.4E-09 8.2E-14 101.6 4.9 43 22-64 65-109 (326)
54 4fk1_A Putative thioredoxin re 98.8 5.4E-09 1.9E-13 98.0 5.2 42 19-61 3-44 (304)
55 3itj_A Thioredoxin reductase 1 98.7 5.6E-09 1.9E-13 99.0 4.9 59 6-64 6-68 (338)
56 4gcm_A TRXR, thioredoxin reduc 98.7 9.5E-09 3.3E-13 96.6 5.7 41 22-63 6-46 (312)
57 4a5l_A Thioredoxin reductase; 98.7 1.4E-08 4.7E-13 95.4 5.3 36 20-55 2-37 (314)
58 3cgv_A Geranylgeranyl reductas 98.6 1.8E-08 6.1E-13 97.8 5.2 42 20-61 2-43 (397)
59 3urh_A Dihydrolipoyl dehydroge 98.6 1.4E-08 4.8E-13 101.9 4.2 49 15-64 19-67 (491)
60 2gqf_A Hypothetical protein HI 98.6 1.4E-08 4.8E-13 99.1 3.9 44 19-62 1-44 (401)
61 3rp8_A Flavoprotein monooxygen 98.6 2.1E-08 7.1E-13 98.0 4.9 45 15-59 16-60 (407)
62 4a9w_A Monooxygenase; baeyer-v 98.6 2.7E-08 9.2E-13 94.8 5.3 44 20-63 1-44 (357)
63 3fg2_P Putative rubredoxin red 98.6 1.4E-06 4.8E-11 84.9 17.7 55 277-333 182-236 (404)
64 2oln_A NIKD protein; flavoprot 98.6 3.1E-08 1.1E-12 96.4 5.7 59 271-333 142-203 (397)
65 3i3l_A Alkylhalidase CMLS; fla 98.6 3.7E-08 1.3E-12 100.8 6.2 44 17-60 18-61 (591)
66 3o0h_A Glutathione reductase; 98.6 2.3E-08 7.8E-13 100.2 4.4 52 279-333 232-283 (484)
67 3ab1_A Ferredoxin--NADP reduct 98.6 2.4E-08 8.3E-13 95.8 4.4 45 19-63 11-55 (360)
68 3l8k_A Dihydrolipoyl dehydroge 98.6 2.2E-08 7.5E-13 99.8 4.2 44 20-63 2-45 (466)
69 3k30_A Histamine dehydrogenase 98.6 4.7E-08 1.6E-12 102.1 6.6 60 3-63 373-432 (690)
70 2gjc_A Thiazole biosynthetic e 98.6 6.9E-08 2.4E-12 90.8 6.9 41 22-62 65-107 (326)
71 2zbw_A Thioredoxin reductase; 98.6 3E-08 1E-12 94.0 4.4 44 20-63 3-46 (335)
72 1ryi_A Glycine oxidase; flavop 98.6 4.5E-08 1.5E-12 94.5 5.7 59 271-333 153-214 (382)
73 1rp0_A ARA6, thiazole biosynth 98.6 3.7E-08 1.3E-12 91.5 4.9 41 21-61 38-79 (284)
74 4ap3_A Steroid monooxygenase; 98.5 4.4E-08 1.5E-12 99.5 4.8 47 19-65 18-64 (549)
75 3da1_A Glycerol-3-phosphate de 98.5 5.2E-08 1.8E-12 99.3 5.2 60 271-332 160-226 (561)
76 3c96_A Flavin-containing monoo 98.5 6.3E-08 2.2E-12 94.7 5.5 43 19-61 1-44 (410)
77 3cty_A Thioredoxin reductase; 98.5 6.6E-08 2.3E-12 91.0 5.4 44 19-63 13-56 (319)
78 1c0p_A D-amino acid oxidase; a 98.5 8.2E-08 2.8E-12 92.2 6.1 40 20-59 4-43 (363)
79 2q7v_A Thioredoxin reductase; 98.5 7.5E-08 2.6E-12 90.9 5.7 43 20-63 6-48 (325)
80 2vdc_G Glutamate synthase [NAD 98.5 7.9E-08 2.7E-12 95.3 6.1 48 15-62 115-162 (456)
81 3jsk_A Cypbp37 protein; octame 98.5 6.3E-08 2.1E-12 91.6 5.0 41 22-62 79-121 (344)
82 2uzz_A N-methyl-L-tryptophan o 98.5 6.8E-08 2.3E-12 92.9 5.3 58 271-332 138-198 (372)
83 4dna_A Probable glutathione re 98.5 5.7E-08 2E-12 96.7 4.3 42 21-63 4-45 (463)
84 3nix_A Flavoprotein/dehydrogen 98.5 9.2E-08 3.2E-12 93.7 5.7 38 21-58 4-41 (421)
85 3lzw_A Ferredoxin--NADP reduct 98.5 5.1E-08 1.7E-12 92.0 3.7 41 22-62 7-47 (332)
86 3f8d_A Thioredoxin reductase ( 98.5 9.4E-08 3.2E-12 89.7 5.5 40 22-63 15-54 (323)
87 1mo9_A ORF3; nucleotide bindin 98.5 8E-08 2.7E-12 97.1 5.2 49 15-63 36-84 (523)
88 2xdo_A TETX2 protein; tetracyc 98.5 1.1E-07 3.7E-12 92.7 5.8 41 20-60 24-64 (398)
89 2gv8_A Monooxygenase; FMO, FAD 98.5 1.1E-07 3.9E-12 94.0 6.1 44 20-63 4-49 (447)
90 2gf3_A MSOX, monomeric sarcosi 98.5 1.2E-07 4.2E-12 91.7 6.0 51 279-333 150-200 (389)
91 1w4x_A Phenylacetone monooxyge 98.5 1E-07 3.5E-12 96.8 5.7 43 20-62 14-56 (542)
92 3alj_A 2-methyl-3-hydroxypyrid 98.5 1.2E-07 4.1E-12 91.7 5.7 41 20-60 9-49 (379)
93 3gwf_A Cyclohexanone monooxyge 98.5 7.7E-08 2.6E-12 97.5 4.5 47 20-66 6-53 (540)
94 2a87_A TRXR, TR, thioredoxin r 98.5 9.3E-08 3.2E-12 90.7 4.7 47 16-63 8-54 (335)
95 2qcu_A Aerobic glycerol-3-phos 98.5 1.2E-07 4.2E-12 95.3 5.7 51 279-332 149-204 (501)
96 3lad_A Dihydrolipoamide dehydr 98.4 1.1E-07 3.9E-12 94.8 5.2 41 21-61 2-42 (476)
97 2cul_A Glucose-inhibited divis 98.4 1.3E-07 4.6E-12 84.9 4.8 35 21-55 2-36 (232)
98 3dk9_A Grase, GR, glutathione 98.4 8.7E-08 3E-12 95.8 3.7 44 20-64 18-61 (478)
99 3d1c_A Flavin-containing putat 98.4 1.1E-07 3.7E-12 91.3 4.3 44 20-64 2-46 (369)
100 2vou_A 2,6-dihydroxypyridine h 98.4 1.9E-07 6.6E-12 90.8 6.1 38 20-57 3-40 (397)
101 3r9u_A Thioredoxin reductase; 98.4 1.3E-07 4.3E-12 88.6 4.6 42 21-63 3-45 (315)
102 1vdc_A NTR, NADPH dependent th 98.4 1E-07 3.6E-12 90.2 4.0 44 20-63 6-53 (333)
103 1v59_A Dihydrolipoamide dehydr 98.4 7.8E-08 2.7E-12 96.1 3.2 44 20-63 3-46 (478)
104 3qfa_A Thioredoxin reductase 1 98.4 1.6E-07 5.5E-12 94.8 5.3 44 21-64 31-82 (519)
105 2r0c_A REBC; flavin adenine di 98.4 2.2E-07 7.5E-12 94.5 5.9 41 21-61 25-65 (549)
106 3uox_A Otemo; baeyer-villiger 98.4 1.8E-07 6.2E-12 94.9 5.2 47 20-66 7-53 (545)
107 3dgz_A Thioredoxin reductase 2 98.4 1.9E-07 6.4E-12 93.6 5.2 45 20-64 4-56 (488)
108 1ojt_A Surface protein; redox- 98.4 1.2E-07 4.1E-12 94.8 3.7 44 20-63 4-47 (482)
109 2qae_A Lipoamide, dihydrolipoy 98.4 1.5E-07 5.2E-12 93.7 4.3 42 22-63 2-43 (468)
110 1chu_A Protein (L-aspartate ox 98.4 1.9E-07 6.6E-12 94.6 5.1 41 20-61 6-46 (540)
111 1dxl_A Dihydrolipoamide dehydr 98.4 1.9E-07 6.4E-12 93.1 4.9 44 20-63 4-47 (470)
112 3pl8_A Pyranose 2-oxidase; sub 98.4 2.6E-07 8.8E-12 95.2 5.9 43 21-63 45-87 (623)
113 3atr_A Conserved archaeal prot 98.4 1.2E-07 4.1E-12 94.1 3.3 37 21-57 5-41 (453)
114 3ic9_A Dihydrolipoamide dehydr 98.4 1.4E-07 4.8E-12 94.6 3.8 41 22-63 8-48 (492)
115 1zmd_A Dihydrolipoyl dehydroge 98.4 1.6E-07 5.5E-12 93.7 4.1 44 20-63 4-47 (474)
116 2gmh_A Electron transfer flavo 98.4 2.1E-07 7.1E-12 95.3 5.0 39 22-60 35-79 (584)
117 2wdq_A Succinate dehydrogenase 98.4 1.9E-07 6.4E-12 95.6 4.5 53 279-332 143-200 (588)
118 3e1t_A Halogenase; flavoprotei 98.4 2.6E-07 9E-12 93.1 5.5 38 20-57 5-42 (512)
119 1zk7_A HGII, reductase, mercur 98.4 2E-07 6.9E-12 92.8 4.6 43 20-63 2-44 (467)
120 1trb_A Thioredoxin reductase; 98.4 1.8E-07 6.2E-12 87.9 4.1 42 20-62 3-44 (320)
121 2r9z_A Glutathione amide reduc 98.4 1.9E-07 6.7E-12 92.8 4.4 42 21-63 3-44 (463)
122 2qa1_A PGAE, polyketide oxygen 98.4 3.3E-07 1.1E-11 92.0 6.2 40 20-59 9-48 (500)
123 2a8x_A Dihydrolipoyl dehydroge 98.4 1.8E-07 6E-12 93.1 4.1 42 21-63 2-43 (464)
124 3c4n_A Uncharacterized protein 98.4 2.4E-07 8.2E-12 90.5 5.0 40 21-60 35-76 (405)
125 2bry_A NEDD9 interacting prote 98.4 2.4E-07 8.4E-12 92.9 5.1 41 20-60 90-130 (497)
126 2yqu_A 2-oxoglutarate dehydrog 98.4 1.9E-07 6.4E-12 92.7 4.2 43 22-64 1-43 (455)
127 2x3n_A Probable FAD-dependent 98.4 2.7E-07 9.2E-12 89.8 5.2 37 21-57 5-41 (399)
128 3ihm_A Styrene monooxygenase A 98.3 2.8E-07 9.6E-12 90.8 5.1 34 22-55 22-55 (430)
129 1ges_A Glutathione reductase; 98.3 2E-07 6.9E-12 92.4 4.1 43 20-63 2-44 (450)
130 2hqm_A GR, grase, glutathione 98.3 2.1E-07 7E-12 93.0 4.2 43 20-63 9-51 (479)
131 3ihg_A RDME; flavoenzyme, anth 98.3 4E-07 1.4E-11 92.2 6.3 38 21-58 4-41 (535)
132 3fmw_A Oxygenase; mithramycin, 98.3 3.8E-07 1.3E-11 93.0 6.0 38 21-58 48-85 (570)
133 3dgh_A TRXR-1, thioredoxin red 98.3 3.1E-07 1.1E-11 91.8 5.3 45 20-64 7-60 (483)
134 2q0l_A TRXR, thioredoxin reduc 98.3 3.7E-07 1.3E-11 85.4 5.5 40 23-63 2-42 (311)
135 2bs2_A Quinol-fumarate reducta 98.3 2.3E-07 8E-12 95.9 4.4 52 279-332 158-214 (660)
136 3ces_A MNMG, tRNA uridine 5-ca 98.3 2.7E-07 9.2E-12 94.3 4.6 47 12-58 17-65 (651)
137 1o94_A Tmadh, trimethylamine d 98.3 3.4E-07 1.2E-11 96.2 5.4 44 20-63 387-430 (729)
138 2rgh_A Alpha-glycerophosphate 98.3 4.2E-07 1.4E-11 92.8 5.9 60 271-332 178-244 (571)
139 2dkh_A 3-hydroxybenzoate hydro 98.3 5.8E-07 2E-11 93.0 6.7 38 21-58 31-69 (639)
140 2eq6_A Pyruvate dehydrogenase 98.3 3.1E-07 1.1E-11 91.3 4.0 43 20-63 4-46 (464)
141 3gyx_A Adenylylsulfate reducta 98.3 5.3E-07 1.8E-11 93.3 5.8 52 279-332 166-227 (662)
142 2qa2_A CABE, polyketide oxygen 98.3 5.5E-07 1.9E-11 90.4 5.8 39 21-59 11-49 (499)
143 1fec_A Trypanothione reductase 98.3 3.5E-07 1.2E-11 91.7 4.3 53 279-333 231-283 (490)
144 3g3e_A D-amino-acid oxidase; F 98.3 2.9E-07 9.8E-12 87.9 3.5 37 23-59 1-43 (351)
145 2h88_A Succinate dehydrogenase 98.3 3.8E-07 1.3E-11 93.7 4.6 52 279-332 155-211 (621)
146 2wpf_A Trypanothione reductase 98.3 2.8E-07 9.7E-12 92.4 3.6 53 279-333 235-287 (495)
147 4hb9_A Similarities with proba 98.3 5.4E-07 1.9E-11 87.5 5.3 35 23-57 2-36 (412)
148 1k0i_A P-hydroxybenzoate hydro 98.3 4.2E-07 1.5E-11 88.2 4.4 35 22-56 2-36 (394)
149 3fbs_A Oxidoreductase; structu 98.3 5.6E-07 1.9E-11 83.4 4.8 58 271-335 166-223 (297)
150 2zxi_A TRNA uridine 5-carboxym 98.3 6.2E-07 2.1E-11 91.3 5.3 39 21-59 26-65 (637)
151 1lvl_A Dihydrolipoamide dehydr 98.2 3.8E-07 1.3E-11 90.5 3.5 42 21-63 4-45 (458)
152 2xve_A Flavin-containing monoo 98.2 7E-07 2.4E-11 88.8 5.3 42 23-64 3-50 (464)
153 1ebd_A E3BD, dihydrolipoamide 98.2 4.8E-07 1.6E-11 89.7 4.1 41 22-63 3-43 (455)
154 3s5w_A L-ornithine 5-monooxyge 98.2 5.7E-07 2E-11 89.3 4.6 41 21-61 29-74 (463)
155 3cp8_A TRNA uridine 5-carboxym 98.2 6.6E-07 2.3E-11 91.3 4.9 46 15-60 14-60 (641)
156 3g5s_A Methylenetetrahydrofola 98.2 1.1E-06 3.7E-11 83.9 5.9 39 23-61 2-40 (443)
157 3c4a_A Probable tryptophan hyd 98.2 7.6E-07 2.6E-11 86.1 4.9 35 23-57 1-37 (381)
158 1xdi_A RV3303C-LPDA; reductase 98.2 3.9E-07 1.3E-11 91.5 2.9 50 280-332 224-273 (499)
159 2e4g_A Tryptophan halogenase; 98.2 9.8E-07 3.4E-11 89.7 5.8 51 279-331 194-245 (550)
160 1fl2_A Alkyl hydroperoxide red 98.2 9E-07 3.1E-11 82.7 5.0 39 22-62 1-39 (310)
161 2aqj_A Tryptophan halogenase, 98.2 1.1E-06 3.8E-11 89.0 6.0 51 279-331 165-215 (538)
162 1onf_A GR, grase, glutathione 98.2 6.9E-07 2.4E-11 89.7 4.2 53 279-333 217-270 (500)
163 1ps9_A 2,4-dienoyl-COA reducta 98.2 1.4E-06 4.7E-11 90.8 6.6 42 21-62 372-413 (671)
164 1y56_A Hypothetical protein PH 98.2 5.9E-07 2E-11 90.1 3.4 43 20-63 106-148 (493)
165 4b1b_A TRXR, thioredoxin reduc 98.2 7.9E-07 2.7E-11 89.8 4.3 53 278-333 262-314 (542)
166 1kf6_A Fumarate reductase flav 98.2 6.8E-07 2.3E-11 91.7 3.4 40 21-60 4-45 (602)
167 2e5v_A L-aspartate oxidase; ar 98.2 1.5E-06 5.1E-11 86.6 5.5 36 24-60 1-36 (472)
168 2ywl_A Thioredoxin reductase r 98.2 1.5E-06 5.2E-11 74.5 4.9 33 23-55 2-34 (180)
169 1jnr_A Adenylylsulfate reducta 98.2 2.2E-06 7.5E-11 88.6 6.9 52 279-332 151-212 (643)
170 2gag_A Heterotetrameric sarcos 98.1 1.3E-06 4.3E-11 94.5 4.9 42 21-62 127-168 (965)
171 3t37_A Probable dehydrogenase; 98.1 1.4E-06 4.6E-11 88.1 4.6 36 21-56 16-52 (526)
172 1kdg_A CDH, cellobiose dehydro 98.1 1.7E-06 5.9E-11 87.8 5.3 37 21-57 6-42 (546)
173 3q9t_A Choline dehydrogenase a 98.1 1.9E-06 6.4E-11 87.7 5.3 37 20-56 4-41 (577)
174 1pn0_A Phenol 2-monooxygenase; 98.1 1.6E-06 5.4E-11 90.1 4.8 45 21-65 7-58 (665)
175 3cgb_A Pyridine nucleotide-dis 98.1 1.9E-06 6.6E-11 86.0 4.8 51 279-333 227-277 (480)
176 1hyu_A AHPF, alkyl hydroperoxi 98.1 2.6E-06 8.7E-11 86.0 5.5 41 20-62 210-250 (521)
177 2pyx_A Tryptophan halogenase; 98.1 2E-06 7E-11 86.8 4.5 51 279-331 175-226 (526)
178 1lqt_A FPRA; NADP+ derivative, 98.1 1.8E-06 6.2E-11 85.5 3.9 42 21-62 2-50 (456)
179 3ics_A Coenzyme A-disulfide re 98.0 2.7E-06 9.3E-11 87.1 5.0 50 279-333 228-277 (588)
180 3kd9_A Coenzyme A disulfide re 98.0 2.8E-06 9.7E-11 84.0 4.9 41 21-61 2-44 (449)
181 1ju2_A HydroxynitrIle lyase; f 98.0 2.1E-06 7E-11 86.9 3.8 38 21-59 25-62 (536)
182 3iwa_A FAD-dependent pyridine 98.0 2.3E-06 7.9E-11 85.2 4.1 53 278-333 201-253 (472)
183 2x8g_A Thioredoxin glutathione 98.0 2.7E-06 9.1E-11 87.4 4.6 43 20-62 105-155 (598)
184 1gte_A Dihydropyrimidine dehyd 98.0 3.4E-06 1.2E-10 91.8 5.3 41 21-61 186-227 (1025)
185 2weu_A Tryptophan 5-halogenase 98.0 2.2E-06 7.4E-11 86.3 3.5 51 279-331 173-223 (511)
186 3lxd_A FAD-dependent pyridine 98.0 5.6E-06 1.9E-10 81.0 5.5 54 278-333 193-246 (415)
187 1cjc_A Protein (adrenodoxin re 98.0 3.7E-06 1.3E-10 83.4 4.2 42 21-62 5-48 (460)
188 3qvp_A Glucose oxidase; oxidor 98.0 4.8E-06 1.6E-10 84.7 5.1 38 18-55 15-53 (583)
189 3oc4_A Oxidoreductase, pyridin 97.9 5.8E-06 2E-10 81.8 4.6 52 278-333 188-239 (452)
190 1n4w_A CHOD, cholesterol oxida 97.9 7.2E-06 2.5E-10 82.3 5.3 39 20-58 3-41 (504)
191 1q1r_A Putidaredoxin reductase 97.9 8.9E-06 3.1E-10 80.0 5.7 53 279-333 191-245 (431)
192 3h28_A Sulfide-quinone reducta 97.9 5.9E-06 2E-10 81.2 4.1 39 23-61 3-43 (430)
193 1m6i_A Programmed cell death p 97.9 7.9E-06 2.7E-10 81.8 5.0 51 280-333 227-277 (493)
194 2cdu_A NADPH oxidase; flavoenz 97.9 8E-06 2.7E-10 80.8 4.7 53 278-333 190-242 (452)
195 1coy_A Cholesterol oxidase; ox 97.9 1.3E-05 4.3E-10 80.6 6.1 38 20-57 9-46 (507)
196 2v3a_A Rubredoxin reductase; a 97.9 9E-06 3.1E-10 78.6 4.9 52 279-333 187-238 (384)
197 3h8l_A NADH oxidase; membrane 97.8 5.9E-06 2E-10 80.5 3.2 49 279-334 218-266 (409)
198 3fim_B ARYL-alcohol oxidase; A 97.8 8E-06 2.7E-10 82.9 4.2 38 22-59 2-40 (566)
199 2bc0_A NADH oxidase; flavoprot 97.8 1E-05 3.5E-10 81.0 4.4 51 279-333 236-286 (490)
200 1nhp_A NADH peroxidase; oxidor 97.8 1.2E-05 4.1E-10 79.4 4.5 51 279-333 191-241 (447)
201 1gpe_A Protein (glucose oxidas 97.8 1.4E-05 4.9E-10 81.6 5.1 38 20-57 22-60 (587)
202 2jbv_A Choline oxidase; alcoho 97.8 1.8E-05 6.3E-10 80.1 5.6 39 21-59 12-51 (546)
203 2gqw_A Ferredoxin reductase; f 97.8 1.6E-05 5.4E-10 77.6 4.8 48 279-333 187-234 (408)
204 3sx6_A Sulfide-quinone reducta 97.8 1.7E-05 5.8E-10 78.1 4.7 36 22-57 4-42 (437)
205 1xhc_A NADH oxidase /nitrite r 97.7 2.5E-05 8.5E-10 75.1 4.8 35 23-58 9-43 (367)
206 3ntd_A FAD-dependent pyridine 97.7 2.4E-05 8.1E-10 79.7 4.7 36 23-58 2-39 (565)
207 3ef6_A Toluene 1,2-dioxygenase 97.7 3.1E-05 1E-09 75.6 5.1 52 279-333 185-236 (410)
208 4b63_A L-ornithine N5 monooxyg 97.5 2.4E-05 8.2E-10 78.4 1.9 42 20-61 37-78 (501)
209 4g6h_A Rotenone-insensitive NA 97.5 6.8E-05 2.3E-09 75.1 4.4 38 19-56 39-76 (502)
210 3klj_A NAD(FAD)-dependent dehy 97.4 9.9E-05 3.4E-09 71.3 5.2 39 21-59 8-46 (385)
211 3vrd_B FCCB subunit, flavocyto 97.4 9.8E-05 3.4E-09 71.6 4.2 39 23-61 3-43 (401)
212 4eqs_A Coenzyme A disulfide re 97.3 0.00013 4.5E-09 71.7 4.4 48 278-332 187-234 (437)
213 3hyw_A Sulfide-quinone reducta 97.3 0.00015 5.3E-09 71.0 4.1 34 24-57 4-39 (430)
214 2e1m_B L-glutamate oxidase; L- 96.7 0.00048 1.7E-08 55.2 1.7 53 323-377 4-57 (130)
215 1nhp_A NADH peroxidase; oxidor 96.4 0.003 1E-07 62.0 5.4 39 22-60 149-187 (447)
216 3klj_A NAD(FAD)-dependent dehy 96.4 0.0028 9.6E-08 61.0 4.9 39 23-61 147-185 (385)
217 2g1u_A Hypothetical protein TM 96.2 0.0046 1.6E-07 51.2 5.0 34 22-55 19-52 (155)
218 1lss_A TRK system potassium up 96.2 0.0047 1.6E-07 49.7 4.8 33 23-55 5-37 (140)
219 4gcm_A TRXR, thioredoxin reduc 96.1 0.0044 1.5E-07 57.5 4.8 37 23-59 146-182 (312)
220 3fwz_A Inner membrane protein 96.0 0.0096 3.3E-07 48.3 5.7 33 23-55 8-40 (140)
221 1id1_A Putative potassium chan 96.0 0.008 2.7E-07 49.5 5.2 34 22-55 3-36 (153)
222 1lvl_A Dihydrolipoamide dehydr 96.0 0.0055 1.9E-07 60.4 4.8 37 23-59 172-208 (458)
223 2v3a_A Rubredoxin reductase; a 95.9 0.0074 2.5E-07 57.9 5.4 39 23-61 146-184 (384)
224 3llv_A Exopolyphosphatase-rela 95.9 0.0079 2.7E-07 48.7 4.8 33 23-55 7-39 (141)
225 2eq6_A Pyruvate dehydrogenase 95.9 0.0068 2.3E-07 59.8 5.2 37 23-59 170-206 (464)
226 2yqu_A 2-oxoglutarate dehydrog 95.8 0.0074 2.5E-07 59.4 5.2 37 23-59 168-204 (455)
227 1ebd_A E3BD, dihydrolipoamide 95.8 0.0073 2.5E-07 59.4 5.1 37 23-59 171-207 (455)
228 3c85_A Putative glutathione-re 95.8 0.0083 2.8E-07 51.0 4.8 36 20-55 37-73 (183)
229 1xhc_A NADH oxidase /nitrite r 95.8 0.0077 2.6E-07 57.5 4.9 37 23-59 144-180 (367)
230 1v59_A Dihydrolipoamide dehydr 95.8 0.0087 3E-07 59.2 5.4 38 23-60 184-221 (478)
231 3lxd_A FAD-dependent pyridine 95.6 0.029 9.8E-07 54.3 8.4 41 20-60 7-49 (415)
232 3ic5_A Putative saccharopine d 95.6 0.013 4.5E-07 45.4 4.7 32 23-54 6-38 (118)
233 2gqw_A Ferredoxin reductase; f 95.6 0.012 4.1E-07 57.0 5.4 38 23-60 146-183 (408)
234 1ges_A Glutathione reductase; 95.6 0.011 3.7E-07 58.1 5.2 37 23-59 168-204 (450)
235 4a5l_A Thioredoxin reductase; 95.5 0.011 3.7E-07 54.7 4.7 35 23-57 153-187 (314)
236 4e12_A Diketoreductase; oxidor 95.5 0.015 5E-07 53.4 5.3 36 20-55 2-37 (283)
237 2r9z_A Glutathione amide reduc 95.4 0.014 4.8E-07 57.5 5.2 37 23-59 167-203 (463)
238 3doj_A AT3G25530, dehydrogenas 95.3 0.017 5.7E-07 53.7 5.1 47 10-56 8-55 (310)
239 3cgb_A Pyridine nucleotide-dis 95.2 0.011 3.8E-07 58.6 3.9 37 23-59 187-223 (480)
240 1ryi_A Glycine oxidase; flavop 95.2 0.031 1.1E-06 53.1 6.9 40 20-59 15-54 (382)
241 4e21_A 6-phosphogluconate dehy 95.2 0.018 6E-07 54.8 5.0 40 16-55 16-55 (358)
242 2bc0_A NADH oxidase; flavoprot 95.1 0.017 6E-07 57.3 5.1 38 23-60 195-232 (490)
243 1q1r_A Putidaredoxin reductase 95.1 0.02 7E-07 55.8 5.5 38 23-60 150-187 (431)
244 1zmd_A Dihydrolipoyl dehydroge 95.1 0.02 6.7E-07 56.6 5.4 37 23-59 179-215 (474)
245 2a8x_A Dihydrolipoyl dehydroge 95.1 0.019 6.5E-07 56.5 5.2 37 23-59 172-208 (464)
246 3ado_A Lambda-crystallin; L-gu 95.1 0.019 6.5E-07 53.5 4.8 33 23-55 7-39 (319)
247 3ic9_A Dihydrolipoamide dehydr 95.1 0.022 7.4E-07 56.6 5.5 38 23-60 175-212 (492)
248 1ojt_A Surface protein; redox- 95.1 0.016 5.5E-07 57.4 4.5 37 23-59 186-222 (482)
249 3ef6_A Toluene 1,2-dioxygenase 95.0 0.021 7.1E-07 55.3 5.2 38 23-60 144-181 (410)
250 3dtt_A NADP oxidoreductase; st 95.0 0.022 7.6E-07 50.9 4.9 43 13-55 10-52 (245)
251 3k6j_A Protein F01G10.3, confi 95.0 0.029 9.8E-07 55.0 5.9 34 23-56 55-88 (460)
252 3kd9_A Coenzyme A disulfide re 94.9 0.025 8.4E-07 55.5 5.4 37 24-60 150-186 (449)
253 1f0y_A HCDH, L-3-hydroxyacyl-C 94.9 0.028 9.7E-07 51.9 5.4 33 23-55 16-48 (302)
254 2hmt_A YUAA protein; RCK, KTN, 94.9 0.023 7.7E-07 45.7 4.2 32 23-54 7-38 (144)
255 3d1c_A Flavin-containing putat 94.9 0.022 7.5E-07 53.9 4.7 36 23-58 167-202 (369)
256 3lk7_A UDP-N-acetylmuramoylala 94.9 0.026 8.9E-07 55.4 5.3 34 22-55 9-42 (451)
257 1dxl_A Dihydrolipoamide dehydr 94.9 0.017 5.8E-07 57.0 4.0 37 23-59 178-214 (470)
258 2q0l_A TRXR, thioredoxin reduc 94.8 0.026 8.9E-07 52.0 5.0 36 23-58 144-179 (311)
259 2hqm_A GR, grase, glutathione 94.8 0.025 8.7E-07 55.9 5.1 37 23-59 186-222 (479)
260 1onf_A GR, grase, glutathione 94.7 0.026 8.9E-07 56.2 5.1 37 23-59 177-213 (500)
261 1bg6_A N-(1-D-carboxylethyl)-L 94.7 0.027 9.4E-07 53.2 5.0 35 21-55 3-37 (359)
262 3l4b_C TRKA K+ channel protien 94.7 0.023 8E-07 49.7 4.1 32 24-55 2-33 (218)
263 3fg2_P Putative rubredoxin red 94.7 0.033 1.1E-06 53.7 5.5 40 23-62 143-182 (404)
264 3gwf_A Cyclohexanone monooxyge 94.7 0.033 1.1E-06 56.0 5.6 34 23-56 179-212 (540)
265 1zk7_A HGII, reductase, mercur 94.6 0.032 1.1E-06 55.0 5.2 37 23-59 177-213 (467)
266 1fl2_A Alkyl hydroperoxide red 94.6 0.03 1E-06 51.6 4.7 35 23-57 145-179 (310)
267 4eqs_A Coenzyme A disulfide re 94.6 0.026 9E-07 55.1 4.6 38 24-61 149-186 (437)
268 2qae_A Lipoamide, dihydrolipoy 94.5 0.033 1.1E-06 54.9 5.2 37 23-59 175-211 (468)
269 2cdu_A NADPH oxidase; flavoenz 94.5 0.031 1.1E-06 54.8 5.0 37 23-59 150-186 (452)
270 2y0c_A BCEC, UDP-glucose dehyd 94.5 0.032 1.1E-06 55.1 5.0 34 22-55 8-41 (478)
271 2xve_A Flavin-containing monoo 94.5 0.031 1.1E-06 55.1 4.8 37 23-59 198-234 (464)
272 3uox_A Otemo; baeyer-villiger 94.4 0.038 1.3E-06 55.7 5.4 36 22-57 185-220 (545)
273 1vdc_A NTR, NADPH dependent th 94.4 0.034 1.2E-06 51.7 4.8 36 23-58 160-195 (333)
274 3k96_A Glycerol-3-phosphate de 94.4 0.038 1.3E-06 52.4 5.0 34 22-55 29-62 (356)
275 3vtf_A UDP-glucose 6-dehydroge 94.4 0.044 1.5E-06 53.3 5.5 34 22-55 21-54 (444)
276 2dpo_A L-gulonate 3-dehydrogen 94.4 0.037 1.3E-06 51.6 4.8 34 23-56 7-40 (319)
277 3e8x_A Putative NAD-dependent 94.3 0.037 1.3E-06 48.8 4.6 36 20-55 19-55 (236)
278 2oln_A NIKD protein; flavoprot 94.3 0.094 3.2E-06 50.1 7.8 38 21-58 3-40 (397)
279 1trb_A Thioredoxin reductase; 94.3 0.037 1.3E-06 51.1 4.7 36 23-58 146-181 (320)
280 2q7v_A Thioredoxin reductase; 94.3 0.039 1.3E-06 51.2 4.8 36 23-58 153-188 (325)
281 2raf_A Putative dinucleotide-b 94.3 0.049 1.7E-06 47.4 5.2 35 22-56 19-53 (209)
282 2a87_A TRXR, TR, thioredoxin r 94.3 0.038 1.3E-06 51.6 4.8 36 23-58 156-191 (335)
283 2cul_A Glucose-inhibited divis 94.3 0.11 3.7E-06 45.8 7.5 50 280-332 69-119 (232)
284 3ntd_A FAD-dependent pyridine 94.2 0.039 1.4E-06 55.7 5.1 36 24-59 153-188 (565)
285 3ghy_A Ketopantoate reductase 94.2 0.04 1.4E-06 51.7 4.9 32 23-54 4-35 (335)
286 2zbw_A Thioredoxin reductase; 94.2 0.036 1.2E-06 51.6 4.5 37 23-59 153-189 (335)
287 2x5o_A UDP-N-acetylmuramoylala 94.2 0.031 1.1E-06 54.7 4.1 36 23-58 6-41 (439)
288 4ap3_A Steroid monooxygenase; 94.2 0.039 1.3E-06 55.6 4.9 36 22-57 191-226 (549)
289 3urh_A Dihydrolipoyl dehydroge 94.2 0.036 1.2E-06 55.0 4.6 38 23-60 199-236 (491)
290 2gv8_A Monooxygenase; FMO, FAD 94.2 0.04 1.4E-06 53.9 4.8 35 23-57 213-248 (447)
291 1ks9_A KPA reductase;, 2-dehyd 94.1 0.051 1.8E-06 49.5 5.2 33 24-56 2-34 (291)
292 3i83_A 2-dehydropantoate 2-red 94.1 0.048 1.6E-06 50.8 5.0 33 23-55 3-35 (320)
293 1pzg_A LDH, lactate dehydrogen 94.1 0.052 1.8E-06 50.9 5.2 33 23-55 10-43 (331)
294 3da1_A Glycerol-3-phosphate de 94.1 0.062 2.1E-06 54.3 6.1 44 19-62 15-58 (561)
295 3dk9_A Grase, GR, glutathione 94.0 0.048 1.6E-06 53.9 5.2 37 23-59 188-224 (478)
296 3g79_A NDP-N-acetyl-D-galactos 94.0 0.044 1.5E-06 54.0 4.8 34 23-56 19-54 (478)
297 2ew2_A 2-dehydropantoate 2-red 94.0 0.048 1.7E-06 50.3 4.9 33 23-55 4-36 (316)
298 3qsg_A NAD-binding phosphogluc 94.0 0.039 1.3E-06 51.3 4.2 33 22-54 24-57 (312)
299 3g0o_A 3-hydroxyisobutyrate de 94.0 0.051 1.7E-06 50.2 5.0 34 22-55 7-40 (303)
300 3l8k_A Dihydrolipoyl dehydroge 94.0 0.057 2E-06 53.1 5.6 39 23-61 173-211 (466)
301 3oc4_A Oxidoreductase, pyridin 94.0 0.05 1.7E-06 53.3 5.1 38 23-60 148-185 (452)
302 4a7p_A UDP-glucose dehydrogena 93.9 0.053 1.8E-06 53.0 5.2 35 22-56 8-42 (446)
303 3qha_A Putative oxidoreductase 93.9 0.046 1.6E-06 50.3 4.5 35 22-56 15-49 (296)
304 3cty_A Thioredoxin reductase; 93.9 0.047 1.6E-06 50.5 4.6 36 23-58 156-191 (319)
305 3s5w_A L-ornithine 5-monooxyge 93.9 0.037 1.3E-06 54.3 4.0 36 22-57 227-264 (463)
306 3hn2_A 2-dehydropantoate 2-red 93.8 0.051 1.7E-06 50.4 4.7 33 23-55 3-35 (312)
307 2uzz_A N-methyl-L-tryptophan o 93.8 0.11 3.9E-06 48.9 7.2 42 22-63 2-43 (372)
308 1zcj_A Peroxisomal bifunctiona 93.8 0.074 2.5E-06 52.3 6.0 33 23-55 38-70 (463)
309 3gg2_A Sugar dehydrogenase, UD 93.8 0.054 1.8E-06 53.1 4.9 33 23-55 3-35 (450)
310 3itj_A Thioredoxin reductase 1 93.8 0.053 1.8E-06 50.3 4.7 37 23-59 174-210 (338)
311 2izz_A Pyrroline-5-carboxylate 93.8 0.052 1.8E-06 50.7 4.6 40 16-55 16-59 (322)
312 1mo9_A ORF3; nucleotide bindin 93.7 0.059 2E-06 53.9 5.2 38 23-60 215-252 (523)
313 2gf3_A MSOX, monomeric sarcosi 93.7 0.12 4E-06 49.1 7.0 37 22-58 3-39 (389)
314 3dfz_A SIRC, precorrin-2 dehyd 93.6 0.065 2.2E-06 47.1 4.7 36 19-54 28-63 (223)
315 3cgv_A Geranylgeranyl reductas 93.6 0.091 3.1E-06 50.0 6.2 52 279-332 102-156 (397)
316 3lad_A Dihydrolipoamide dehydr 93.6 0.064 2.2E-06 52.9 5.1 37 23-59 181-217 (476)
317 3ab1_A Ferredoxin--NADP reduct 93.5 0.062 2.1E-06 50.6 4.8 37 23-59 164-200 (360)
318 1zej_A HBD-9, 3-hydroxyacyl-CO 93.5 0.068 2.3E-06 49.1 4.8 33 22-55 12-44 (293)
319 1mv8_A GMD, GDP-mannose 6-dehy 93.4 0.063 2.2E-06 52.4 4.7 32 24-55 2-33 (436)
320 2weu_A Tryptophan 5-halogenase 93.4 0.17 5.8E-06 50.3 8.0 35 22-56 2-39 (511)
321 3ics_A Coenzyme A-disulfide re 93.4 0.078 2.7E-06 53.8 5.5 38 23-60 188-225 (588)
322 2pv7_A T-protein [includes: ch 93.4 0.1 3.6E-06 48.0 5.9 34 23-56 22-56 (298)
323 4dio_A NAD(P) transhydrogenase 93.4 0.075 2.6E-06 51.0 5.0 34 23-56 191-224 (405)
324 2e4g_A Tryptophan halogenase; 93.3 0.18 6.1E-06 50.7 8.0 45 12-56 15-62 (550)
325 2ewd_A Lactate dehydrogenase,; 93.3 0.076 2.6E-06 49.4 4.8 33 23-55 5-38 (317)
326 2x8g_A Thioredoxin glutathione 93.3 0.065 2.2E-06 54.6 4.7 31 24-54 288-318 (598)
327 2uyy_A N-PAC protein; long-cha 93.3 0.092 3.1E-06 48.7 5.4 35 22-56 30-64 (316)
328 1hyu_A AHPF, alkyl hydroperoxi 93.2 0.059 2E-06 53.9 4.3 36 23-58 356-391 (521)
329 1kyq_A Met8P, siroheme biosynt 93.2 0.045 1.5E-06 49.7 3.0 36 21-56 12-47 (274)
330 4g65_A TRK system potassium up 93.2 0.052 1.8E-06 53.4 3.7 34 22-55 3-36 (461)
331 3mog_A Probable 3-hydroxybutyr 93.1 0.081 2.8E-06 52.3 5.0 34 22-55 5-38 (483)
332 2rgh_A Alpha-glycerophosphate 93.1 0.17 5.8E-06 51.2 7.5 40 21-60 31-70 (571)
333 3pid_A UDP-glucose 6-dehydroge 93.1 0.079 2.7E-06 51.4 4.8 33 23-56 37-69 (432)
334 4dll_A 2-hydroxy-3-oxopropiona 93.1 0.089 3.1E-06 49.0 5.1 34 22-55 31-64 (320)
335 3ggo_A Prephenate dehydrogenas 93.1 0.11 3.8E-06 48.3 5.7 33 23-55 34-68 (314)
336 4huj_A Uncharacterized protein 93.1 0.049 1.7E-06 47.8 3.0 35 21-55 22-57 (220)
337 3atr_A Conserved archaeal prot 93.0 0.18 6E-06 49.3 7.3 51 279-331 100-155 (453)
338 2gmh_A Electron transfer flavo 93.0 0.23 7.8E-06 50.4 8.3 53 279-332 144-211 (584)
339 1t2d_A LDH-P, L-lactate dehydr 93.0 0.1 3.5E-06 48.7 5.3 33 23-55 5-38 (322)
340 3f8d_A Thioredoxin reductase ( 93.0 0.086 3E-06 48.4 4.8 37 23-59 155-191 (323)
341 1evy_A Glycerol-3-phosphate de 92.9 0.068 2.3E-06 50.8 4.0 32 24-55 17-48 (366)
342 3pef_A 6-phosphogluconate dehy 92.9 0.092 3.1E-06 48.0 4.7 33 24-56 3-35 (287)
343 2vns_A Metalloreductase steap3 92.9 0.1 3.4E-06 45.6 4.7 33 23-55 29-61 (215)
344 3eag_A UDP-N-acetylmuramate:L- 92.9 0.11 3.6E-06 48.7 5.1 34 23-56 5-39 (326)
345 3hwr_A 2-dehydropantoate 2-red 92.9 0.094 3.2E-06 48.8 4.8 33 22-55 19-51 (318)
346 2zyd_A 6-phosphogluconate dehy 92.8 0.089 3E-06 52.0 4.8 36 20-55 13-48 (480)
347 3nix_A Flavoprotein/dehydrogen 92.8 0.16 5.5E-06 48.8 6.6 53 279-332 106-160 (421)
348 2vdc_G Glutamate synthase [NAD 92.8 0.096 3.3E-06 51.4 5.0 36 22-57 264-300 (456)
349 3iwa_A FAD-dependent pyridine 92.8 0.23 8E-06 48.7 7.8 37 22-58 3-41 (472)
350 3gpi_A NAD-dependent epimerase 92.8 0.11 3.8E-06 47.2 5.0 34 23-56 4-37 (286)
351 1fec_A Trypanothione reductase 92.7 0.23 7.9E-06 49.1 7.7 43 21-63 2-53 (490)
352 1z82_A Glycerol-3-phosphate de 92.7 0.1 3.6E-06 48.8 4.9 32 23-54 15-46 (335)
353 3tl2_A Malate dehydrogenase; c 92.7 0.12 4.1E-06 48.0 5.2 35 20-54 6-41 (315)
354 3g17_A Similar to 2-dehydropan 92.7 0.069 2.4E-06 49.1 3.6 33 23-55 3-35 (294)
355 3r9u_A Thioredoxin reductase; 92.7 0.1 3.4E-06 47.8 4.7 35 23-57 148-182 (315)
356 1lld_A L-lactate dehydrogenase 92.7 0.11 3.7E-06 48.3 4.9 33 23-55 8-42 (319)
357 2wpf_A Trypanothione reductase 92.7 0.25 8.5E-06 49.0 7.9 45 19-63 4-57 (495)
358 2x3n_A Probable FAD-dependent 92.7 0.15 5.3E-06 48.7 6.1 52 279-332 107-160 (399)
359 3p2y_A Alanine dehydrogenase/p 92.6 0.083 2.8E-06 50.3 4.0 33 23-55 185-217 (381)
360 3l6d_A Putative oxidoreductase 92.6 0.13 4.4E-06 47.6 5.3 34 22-55 9-42 (306)
361 3dfu_A Uncharacterized protein 92.6 0.052 1.8E-06 48.0 2.4 32 23-54 7-38 (232)
362 2q3e_A UDP-glucose 6-dehydroge 92.6 0.094 3.2E-06 51.6 4.6 33 23-55 6-40 (467)
363 3l9w_A Glutathione-regulated p 92.5 0.11 3.7E-06 50.3 4.8 34 23-56 5-38 (413)
364 3o0h_A Glutathione reductase; 92.5 0.27 9.3E-06 48.5 7.8 42 21-63 25-66 (484)
365 3lzw_A Ferredoxin--NADP reduct 92.5 0.12 4E-06 47.8 4.9 37 23-59 155-191 (332)
366 3dgz_A Thioredoxin reductase 2 92.3 0.13 4.5E-06 50.8 5.3 33 23-55 186-218 (488)
367 3oj0_A Glutr, glutamyl-tRNA re 92.3 0.069 2.4E-06 43.2 2.7 33 23-55 22-54 (144)
368 3pdu_A 3-hydroxyisobutyrate de 92.3 0.093 3.2E-06 48.0 3.9 33 24-56 3-35 (287)
369 1m6i_A Programmed cell death p 92.3 0.35 1.2E-05 47.9 8.4 39 20-58 9-49 (493)
370 2hjr_A Malate dehydrogenase; m 92.2 0.14 4.9E-06 47.8 5.2 33 23-55 15-48 (328)
371 3ojo_A CAP5O; rossmann fold, c 92.2 0.12 4.1E-06 50.2 4.7 34 23-56 12-45 (431)
372 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.13 4.5E-06 44.4 4.6 32 24-55 2-34 (212)
373 3qfa_A Thioredoxin reductase 1 92.2 0.14 4.7E-06 51.2 5.3 32 23-54 211-242 (519)
374 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.13 4.3E-06 47.4 4.7 33 23-55 4-36 (302)
375 4gwg_A 6-phosphogluconate dehy 92.2 0.14 4.8E-06 50.5 5.2 34 22-55 4-37 (484)
376 3cky_A 2-hydroxymethyl glutara 92.2 0.13 4.5E-06 47.2 4.8 34 22-55 4-37 (301)
377 1txg_A Glycerol-3-phosphate de 92.1 0.1 3.5E-06 48.6 4.0 30 24-53 2-31 (335)
378 2qcu_A Aerobic glycerol-3-phos 92.1 0.31 1.1E-05 48.3 7.7 39 21-59 2-40 (501)
379 3fbs_A Oxidoreductase; structu 92.1 0.13 4.6E-06 46.5 4.7 33 23-56 142-174 (297)
380 1dlj_A UDP-glucose dehydrogena 92.1 0.12 4E-06 49.9 4.5 31 24-55 2-32 (402)
381 1cjc_A Protein (adrenodoxin re 92.0 0.12 4.1E-06 50.8 4.6 35 23-57 146-201 (460)
382 2ywl_A Thioredoxin reductase r 92.0 0.35 1.2E-05 40.3 6.9 50 279-333 56-105 (180)
383 1xdi_A RV3303C-LPDA; reductase 92.0 0.37 1.3E-05 47.7 8.2 42 22-64 2-46 (499)
384 3i3l_A Alkylhalidase CMLS; fla 92.0 0.22 7.4E-06 50.6 6.5 52 279-332 128-182 (591)
385 4dna_A Probable glutathione re 91.9 0.28 9.7E-06 48.0 7.2 53 278-333 210-263 (463)
386 2v6b_A L-LDH, L-lactate dehydr 91.9 0.15 5.1E-06 47.1 4.9 32 24-55 2-35 (304)
387 3ego_A Probable 2-dehydropanto 91.9 0.15 5.1E-06 47.2 4.8 32 23-55 3-34 (307)
388 2wtb_A MFP2, fatty acid multif 91.8 0.2 6.9E-06 52.1 6.1 33 23-55 313-345 (725)
389 2gqf_A Hypothetical protein HI 91.7 0.41 1.4E-05 46.0 7.9 60 271-332 101-162 (401)
390 3ktd_A Prephenate dehydrogenas 91.7 0.18 6.1E-06 47.4 5.2 33 23-55 9-41 (341)
391 2o3j_A UDP-glucose 6-dehydroge 91.7 0.15 5.2E-06 50.4 4.9 33 23-55 10-44 (481)
392 4ffl_A PYLC; amino acid, biosy 91.7 0.17 5.7E-06 47.9 5.0 34 23-56 2-35 (363)
393 3c4n_A Uncharacterized protein 91.7 0.098 3.4E-06 50.3 3.4 59 271-333 161-231 (405)
394 2aqj_A Tryptophan halogenase, 91.7 0.33 1.1E-05 48.6 7.4 38 20-57 3-43 (538)
395 1x0v_A GPD-C, GPDH-C, glycerol 91.6 0.1 3.5E-06 49.1 3.4 35 22-56 8-49 (354)
396 4b1b_A TRXR, thioredoxin reduc 91.5 0.15 5.2E-06 51.1 4.7 36 23-58 224-259 (542)
397 3e1t_A Halogenase; flavoprotei 91.5 0.35 1.2E-05 48.1 7.4 51 279-331 111-165 (512)
398 1x13_A NAD(P) transhydrogenase 91.5 0.16 5.6E-06 48.8 4.7 33 23-55 173-205 (401)
399 3dgh_A TRXR-1, thioredoxin red 91.4 0.2 6.8E-06 49.4 5.4 33 23-55 188-220 (483)
400 2rcy_A Pyrroline carboxylate r 91.4 0.17 5.7E-06 45.4 4.5 35 22-56 4-42 (262)
401 2pyx_A Tryptophan halogenase; 91.4 0.45 1.5E-05 47.4 8.0 37 21-57 6-54 (526)
402 2qyt_A 2-dehydropantoate 2-red 91.4 0.13 4.4E-06 47.5 3.8 31 23-53 9-45 (317)
403 2iz1_A 6-phosphogluconate dehy 91.3 0.19 6.6E-06 49.5 5.2 34 22-55 5-38 (474)
404 4ezb_A Uncharacterized conserv 91.3 0.17 5.6E-06 47.1 4.4 33 23-55 25-58 (317)
405 1guz_A Malate dehydrogenase; o 91.2 0.2 6.9E-06 46.4 4.9 32 24-55 2-35 (310)
406 1nyt_A Shikimate 5-dehydrogena 91.2 0.25 8.6E-06 44.7 5.5 32 23-54 120-151 (271)
407 2bs2_A Quinol-fumarate reducta 91.1 0.46 1.6E-05 48.9 7.9 42 20-61 3-44 (660)
408 1l7d_A Nicotinamide nucleotide 91.1 0.21 7.1E-06 47.8 5.0 34 22-55 172-205 (384)
409 2wdq_A Succinate dehydrogenase 91.1 0.43 1.5E-05 48.4 7.6 42 20-61 5-46 (588)
410 3gvi_A Malate dehydrogenase; N 91.0 0.23 7.9E-06 46.3 5.1 36 20-55 5-41 (324)
411 2f1k_A Prephenate dehydrogenas 91.0 0.22 7.5E-06 45.1 4.9 32 24-55 2-33 (279)
412 2zxi_A TRNA uridine 5-carboxym 90.9 0.45 1.5E-05 48.4 7.5 52 279-333 123-175 (637)
413 3ius_A Uncharacterized conserv 90.9 0.2 7E-06 45.3 4.6 33 23-55 6-38 (286)
414 4id9_A Short-chain dehydrogena 90.8 0.21 7.3E-06 46.5 4.8 37 21-57 18-55 (347)
415 3c7a_A Octopine dehydrogenase; 90.8 0.18 6E-06 48.6 4.3 30 23-52 3-33 (404)
416 2gag_A Heterotetrameric sarcos 90.8 0.12 4.1E-06 55.8 3.3 37 23-59 285-321 (965)
417 2pzm_A Putative nucleotide sug 90.7 0.28 9.7E-06 45.5 5.5 41 15-55 13-54 (330)
418 1yqg_A Pyrroline-5-carboxylate 90.7 0.2 6.8E-06 44.9 4.3 32 24-55 2-34 (263)
419 2aef_A Calcium-gated potassium 90.7 0.12 3.9E-06 45.7 2.6 32 23-55 10-41 (234)
420 2a9f_A Putative malic enzyme ( 90.7 0.23 7.7E-06 47.3 4.7 35 21-55 187-222 (398)
421 1pjc_A Protein (L-alanine dehy 90.7 0.23 7.8E-06 47.1 4.8 33 23-55 168-200 (361)
422 4dmm_A 3-oxoacyl-[acyl-carrier 90.6 0.2 6.8E-06 45.3 4.2 51 5-55 6-62 (269)
423 2gf2_A Hibadh, 3-hydroxyisobut 90.6 0.23 7.9E-06 45.4 4.7 32 24-55 2-33 (296)
424 2eez_A Alanine dehydrogenase; 90.6 0.23 7.9E-06 47.2 4.8 33 23-55 167-199 (369)
425 1w6u_A 2,4-dienoyl-COA reducta 90.5 0.46 1.6E-05 43.3 6.7 46 10-55 14-60 (302)
426 2qrj_A Saccharopine dehydrogen 90.5 0.25 8.5E-06 47.1 4.8 40 22-61 214-258 (394)
427 2h88_A Succinate dehydrogenase 90.5 0.44 1.5E-05 48.6 7.1 42 20-61 16-57 (621)
428 3c24_A Putative oxidoreductase 90.5 0.31 1.1E-05 44.3 5.5 33 23-55 12-45 (286)
429 3q2o_A Phosphoribosylaminoimid 90.5 0.34 1.2E-05 46.2 6.0 35 21-55 13-47 (389)
430 1o94_A Tmadh, trimethylamine d 90.5 0.2 6.8E-06 52.3 4.5 36 23-59 529-566 (729)
431 2p4q_A 6-phosphogluconate dehy 90.4 0.24 8.3E-06 49.1 4.9 33 23-55 11-43 (497)
432 1hdo_A Biliverdin IX beta redu 90.4 0.29 9.9E-06 41.6 4.9 33 23-55 4-37 (206)
433 3tri_A Pyrroline-5-carboxylate 90.4 0.27 9.3E-06 44.7 5.0 34 22-55 3-39 (280)
434 3p7m_A Malate dehydrogenase; p 90.4 0.3 1E-05 45.4 5.3 35 21-55 4-39 (321)
435 1vpd_A Tartronate semialdehyde 90.4 0.25 8.6E-06 45.2 4.7 33 23-55 6-38 (299)
436 2pgd_A 6-phosphogluconate dehy 90.3 0.26 8.9E-06 48.7 5.1 33 23-55 3-35 (482)
437 3ew7_A LMO0794 protein; Q8Y8U8 90.3 0.29 1E-05 42.1 4.9 32 24-55 2-34 (221)
438 3dhn_A NAD-dependent epimerase 90.3 0.22 7.6E-06 43.3 4.1 33 23-55 5-38 (227)
439 1a5z_A L-lactate dehydrogenase 90.2 0.22 7.6E-06 46.3 4.3 32 24-55 2-35 (319)
440 1pjq_A CYSG, siroheme synthase 90.2 0.24 8.1E-06 48.6 4.6 34 21-54 11-44 (457)
441 1ur5_A Malate dehydrogenase; o 90.1 0.3 1E-05 45.2 5.0 33 23-55 3-36 (309)
442 1vl6_A Malate oxidoreductase; 90.1 0.27 9.1E-06 46.7 4.7 34 21-54 191-225 (388)
443 1gte_A Dihydropyrimidine dehyd 90.1 0.23 7.8E-06 53.9 4.7 33 24-56 334-367 (1025)
444 2qa1_A PGAE, polyketide oxygen 90.0 0.53 1.8E-05 46.6 7.1 53 279-334 106-162 (500)
445 2qa2_A CABE, polyketide oxygen 90.0 0.52 1.8E-05 46.7 7.0 53 279-334 107-163 (499)
446 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.0 0.28 9.4E-06 48.4 4.9 32 24-55 3-34 (478)
447 3h2s_A Putative NADH-flavin re 89.9 0.32 1.1E-05 42.1 4.8 31 24-54 2-33 (224)
448 1y6j_A L-lactate dehydrogenase 89.9 0.32 1.1E-05 45.2 5.0 34 22-55 7-42 (318)
449 3zwc_A Peroxisomal bifunctiona 89.9 0.39 1.3E-05 49.9 6.1 35 22-56 316-350 (742)
450 3pqe_A L-LDH, L-lactate dehydr 89.8 0.3 1E-05 45.5 4.8 33 22-54 5-39 (326)
451 1yj8_A Glycerol-3-phosphate de 89.8 0.21 7.3E-06 47.5 3.9 34 23-56 22-62 (375)
452 1k0i_A P-hydroxybenzoate hydro 89.8 0.35 1.2E-05 46.0 5.4 54 279-334 103-160 (394)
453 2g5c_A Prephenate dehydrogenas 89.8 0.32 1.1E-05 44.1 4.8 32 24-55 3-36 (281)
454 2ahr_A Putative pyrroline carb 89.7 0.31 1.1E-05 43.6 4.6 33 23-55 4-36 (259)
455 1rp0_A ARA6, thiazole biosynth 89.7 0.62 2.1E-05 42.3 6.8 52 279-332 119-185 (284)
456 1jw9_B Molybdopterin biosynthe 89.7 0.28 9.5E-06 43.8 4.3 34 22-55 31-65 (249)
457 4b4o_A Epimerase family protei 89.7 0.38 1.3E-05 43.9 5.3 35 24-58 2-37 (298)
458 1wdk_A Fatty oxidation complex 89.6 0.22 7.6E-06 51.7 4.1 33 23-55 315-347 (715)
459 3ces_A MNMG, tRNA uridine 5-ca 89.6 0.53 1.8E-05 48.1 6.7 51 279-332 124-175 (651)
460 2vhw_A Alanine dehydrogenase; 89.5 0.32 1.1E-05 46.4 4.8 33 23-55 169-201 (377)
461 1edz_A 5,10-methylenetetrahydr 89.5 0.39 1.3E-05 44.5 5.1 43 21-63 176-227 (320)
462 3k30_A Histamine dehydrogenase 89.5 0.27 9.1E-06 51.0 4.5 39 23-61 524-564 (690)
463 1hyh_A L-hicdh, L-2-hydroxyiso 89.5 0.28 9.7E-06 45.3 4.3 32 24-55 3-36 (309)
464 1w4x_A Phenylacetone monooxyge 89.4 0.33 1.1E-05 48.7 5.1 34 23-56 187-220 (542)
465 1p77_A Shikimate 5-dehydrogena 89.3 0.31 1.1E-05 44.1 4.4 33 23-55 120-152 (272)
466 3phh_A Shikimate dehydrogenase 89.3 0.4 1.4E-05 43.3 5.0 34 22-55 118-151 (269)
467 4gbj_A 6-phosphogluconate dehy 89.2 0.28 9.6E-06 45.1 4.0 33 24-56 7-39 (297)
468 2cvz_A Dehydrogenase, 3-hydrox 89.2 0.32 1.1E-05 44.1 4.4 31 24-55 3-33 (289)
469 2egg_A AROE, shikimate 5-dehyd 89.2 0.45 1.5E-05 43.7 5.4 32 23-54 142-174 (297)
470 1yb4_A Tartronic semialdehyde 89.1 0.27 9.3E-06 44.8 3.9 32 23-55 4-35 (295)
471 3k31_A Enoyl-(acyl-carrier-pro 89.0 0.57 2E-05 42.8 6.0 34 22-55 30-66 (296)
472 3d1l_A Putative NADP oxidoredu 89.0 0.33 1.1E-05 43.6 4.3 33 23-55 11-44 (266)
473 1np3_A Ketol-acid reductoisome 88.9 0.39 1.3E-05 45.0 4.9 33 23-55 17-49 (338)
474 1lqt_A FPRA; NADP+ derivative, 88.8 0.34 1.2E-05 47.5 4.5 39 23-61 148-207 (456)
475 3ek2_A Enoyl-(acyl-carrier-pro 88.7 0.4 1.4E-05 42.9 4.6 36 20-55 12-50 (271)
476 1i36_A Conserved hypothetical 88.6 0.37 1.3E-05 43.2 4.3 30 24-53 2-31 (264)
477 3orf_A Dihydropteridine reduct 88.6 0.46 1.6E-05 42.2 5.0 33 24-56 24-57 (251)
478 3gt0_A Pyrroline-5-carboxylate 88.6 0.44 1.5E-05 42.3 4.8 33 23-55 3-39 (247)
479 3b1f_A Putative prephenate deh 88.5 0.35 1.2E-05 44.0 4.2 33 23-55 7-41 (290)
480 1ff9_A Saccharopine reductase; 88.4 0.39 1.3E-05 46.9 4.7 32 23-54 4-35 (450)
481 4a9w_A Monooxygenase; baeyer-v 88.3 0.92 3.1E-05 42.0 7.1 50 279-332 76-126 (357)
482 1n4w_A CHOD, cholesterol oxida 88.2 0.5 1.7E-05 46.9 5.4 55 278-333 220-283 (504)
483 1kf6_A Fumarate reductase flav 88.2 0.75 2.6E-05 46.7 6.8 52 279-332 134-191 (602)
484 2hk9_A Shikimate dehydrogenase 88.2 0.39 1.4E-05 43.5 4.2 33 22-54 129-161 (275)
485 1a4i_A Methylenetetrahydrofola 88.2 0.65 2.2E-05 42.4 5.6 35 20-54 163-198 (301)
486 2rir_A Dipicolinate synthase, 88.1 0.47 1.6E-05 43.5 4.8 34 22-55 157-190 (300)
487 3ond_A Adenosylhomocysteinase; 87.9 0.59 2E-05 45.8 5.5 34 22-55 265-298 (488)
488 2b69_A UDP-glucuronate decarbo 87.7 0.53 1.8E-05 43.8 5.0 34 22-55 27-61 (343)
489 3d0o_A L-LDH 1, L-lactate dehy 87.7 0.49 1.7E-05 43.9 4.6 35 21-55 5-41 (317)
490 4hv4_A UDP-N-acetylmuramate--L 87.7 0.4 1.4E-05 47.5 4.2 35 22-56 22-57 (494)
491 4a26_A Putative C-1-tetrahydro 87.6 0.72 2.5E-05 42.1 5.6 35 21-55 164-199 (300)
492 2d5c_A AROE, shikimate 5-dehyd 87.6 0.54 1.8E-05 42.2 4.8 32 24-55 118-149 (263)
493 4gx0_A TRKA domain protein; me 87.6 0.5 1.7E-05 47.6 5.0 34 23-56 349-382 (565)
494 3i6i_A Putative leucoanthocyan 87.5 0.52 1.8E-05 44.0 4.8 34 22-55 10-44 (346)
495 3d4o_A Dipicolinate synthase s 87.5 0.54 1.8E-05 43.0 4.8 34 22-55 155-188 (293)
496 1nvt_A Shikimate 5'-dehydrogen 87.5 0.57 2E-05 42.7 4.9 31 23-54 129-159 (287)
497 1oju_A MDH, malate dehydrogena 87.5 0.46 1.6E-05 43.6 4.2 32 24-55 2-35 (294)
498 3rp8_A Flavoprotein monooxygen 87.5 0.76 2.6E-05 43.9 6.0 51 279-334 127-178 (407)
499 2z1m_A GDP-D-mannose dehydrata 87.4 0.59 2E-05 43.3 5.1 34 23-56 4-38 (345)
500 2we8_A Xanthine dehydrogenase; 87.3 0.62 2.1E-05 44.4 5.2 35 23-57 205-239 (386)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.5e-50 Score=399.77 Aligned_cols=351 Identities=24% Similarity=0.442 Sum_probs=283.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (416)
++..|||||||||++||++|+.|+++|++|+|+|+++++||++.+++..++..+... +.+. .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~-g~~~-----------------~ 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKP-KENI-----------------P 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCT-TSCC-----------------C
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhccc-CCCc-----------------c
Confidence 456799999999999999999999999999999999999999999998765444432 1110 0
Q ss_pred ccccCCCCceEeeCCCCeEEeeCchHHHHHHhcCcccccccccccceeeec--------cCCceeecCCChhhhhhcCCC
Q 014883 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (416)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~--------~~g~~~~~p~~~~~~~~~~~l 170 (416)
..+ +..++|++|+. |+++++.+.++++|.++++.+|++|+.+++.|++. ++|+.+++|.++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL~-P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEESS-CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEeec-CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 112 35689999995 99999999999999999999999999999988763 256799999999999999999
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhH
Q 014883 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (416)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 250 (416)
++.+|+++++|+..++++....+... + ..+....|+.+|++++++++.+++++.+++++.... +. ...++..+
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~~---~-~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~-~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNTW---D-NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLND-DY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGGS---T-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchhh---h-cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCC-Cc--ccCCHHHH
Confidence 99999999999998876643222100 0 112346899999999999999999887776654321 11 13467778
Q ss_pred HHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEE
Q 014883 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (416)
Q Consensus 251 ~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~V 330 (416)
+.++..|+.|+++||. +++.||+||+++|+++|++.+++.|++|+++++|++|..+ ++|++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~--s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGK--SPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSS--CSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCC--CceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEE
Confidence 8888999988888874 3589999999999999999999999999999999999984 278889999989999999999
Q ss_pred EECCCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCCeEEEEEecCC
Q 014883 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (416)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~--~~~~~~~~~pp~~~~~~~~~~v~~~~~~~~ 408 (416)
|+++.+.. . +|.. . ...+.++|+++|.++|+.+ ++++++++|||.+.+. .++|||.+++++
T Consensus 307 I~a~~~~~-~--------~p~~---~---~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~~--~~~iy~~~~s~~ 369 (475)
T 3p1w_A 307 ICDPSYVM-H--------LKNK---I---KKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLNR--KSDIYINLVSFQ 369 (475)
T ss_dssp EECGGGCT-T--------STTS---E---EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGTS--SSCEEEEEEEGG
T ss_pred EECCCccc-c--------Cccc---c---cccceEEEEEEEEeccCcccCCCceEEEEeCCcccCC--CCCEEEEEECCC
Confidence 99887641 1 1110 0 1257899999999999965 5678899999987654 578999999999
Q ss_pred CccCCCCC
Q 014883 409 LAVCPLGM 416 (416)
Q Consensus 409 ~~~~p~G~ 416 (416)
+++||+|+
T Consensus 370 ~~~cp~G~ 377 (475)
T 3p1w_A 370 HGVTLKGK 377 (475)
T ss_dssp GTSSCTTC
T ss_pred cCcCCCCc
Confidence 99999996
No 2
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=2.6e-47 Score=387.97 Aligned_cols=362 Identities=32% Similarity=0.547 Sum_probs=283.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCC-------C----------
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSS-------V---------- 82 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~-------~---------- 82 (416)
+.+|||+|||+|+.|.+.|+.|++.|++|+|+|+|++|||.+.++++.++..|+........ +
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEA 85 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhh
Confidence 44799999999999999999999999999999999999999999999999899876542100 0
Q ss_pred ----CCCCcccccccccc--------------------------------------------------------------
Q 014883 83 ----CPDPLYSDVEISNY-------------------------------------------------------------- 96 (416)
Q Consensus 83 ----~~~~~~~~~~~~~~-------------------------------------------------------------- 96 (416)
.....+++.++.++
T Consensus 86 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (650)
T 1vg0_A 86 IPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPG 165 (650)
T ss_dssp EEBCSSCCCEEEEEEEECSCC-----------------------------------------------------------
T ss_pred ccccccccccccceeEeecccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000000000000
Q ss_pred ----------------------------------------c---ccc----ccCCCCceEeeCCCCeEEeeCchHHHHHH
Q 014883 97 ----------------------------------------A---SRL----LSQHPRNFNLDVSGPRVLFCADHAVDLML 129 (416)
Q Consensus 97 ----------------------------------------~---~~~----~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~ 129 (416)
. ..+ +.+..|+|+||++ |+++++++.++++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~-PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 166 PESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLV-SKLLYSRGLLIDLLI 244 (650)
T ss_dssp ---------------------------------------------CCCHHHHHHTGGGCCEESS-CCCEESSSHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeC-CeeeeCCcHHHHHHH
Confidence 0 000 1125689999995 999999999999999
Q ss_pred hcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCc
Q 014883 130 KSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSP 209 (416)
Q Consensus 130 ~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 209 (416)
++|+.+|++|+.++..|++. +|+++++|+++.++|+++.+++.+|+++|+|+..+..+.. .+ ..+..+...|
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p------~~~~~~d~~S 316 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP------DEYRAYEGTT 316 (650)
T ss_dssp HHTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH------HHHHTTTTSB
T ss_pred HcCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch------HHHhhhccCC
Confidence 99999999999999988874 8889999999999999999999999999999998876432 11 1123456799
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHH
Q 014883 210 FAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRA 289 (416)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~ 289 (416)
+.+|++++++++.+++++.+.+++..... .++..++.++..|+.++++|+. ++++||+||+++|+++|+|++
T Consensus 317 ~~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~--sg~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 317 FSEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGN--TPFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSS--SSEEEETTCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhcc--CceEEeCCchhHHHHHHHHHH
Confidence 99999999999999998887655543221 2345556667788888888874 348999999999999999999
Q ss_pred HhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEE
Q 014883 290 AVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGI 369 (416)
Q Consensus 290 ~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i 369 (416)
+++||+|+|+++|++|.++.++|++++|++.+|++++||+||++|.++ +... ..+...+.++|++
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~l-p~~~--------------~~~~~~~~v~R~i 453 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL-SENT--------------CSRVQYRQISRAV 453 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGB-CTTT--------------TTTCCCEEEEEEE
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhc-CHhH--------------hccccccceEEEE
Confidence 999999999999999999721188999988889999999999988765 3311 0112357899999
Q ss_pred EEecCCCCCCC---CceEEEeCCCCCCCCCCCeEEEEEecCCCccCCCCC
Q 014883 370 CITRSSLKPDL---SNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (416)
Q Consensus 370 ~i~~~p~~~~~---~~~~~~~pp~~~~~~~~~~v~~~~~~~~~~~~p~G~ 416 (416)
+|+++|+.+.. +.++++||+.+ + ..+.||+++.++++++||+|+
T Consensus 454 ~i~~~pi~~~~~~~~~~~iiiP~~~-g--~~~~V~i~~~Ss~~~~cP~G~ 500 (650)
T 1vg0_A 454 LITDGSVLRTDADQQVSILTVPAEE-P--GSFAVRVIELCSSTMTCMKGT 500 (650)
T ss_dssp EEESSCSSCCSCCCCCEEEEECCSS-T--TSCCEEEEEECGGGTSSCTTC
T ss_pred EEecCCCCCcCCCcceEEEEccCcc-C--CCCCEEEEEeCCCCCCCCCCC
Confidence 99999987542 45788898766 2 357899999999999999996
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=3.1e-38 Score=315.60 Aligned_cols=350 Identities=25% Similarity=0.492 Sum_probs=255.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
+.++||||||||++||+||++|+++|++|+||||++++||+++|++.+|...+.+ .+.. . ..+ ...
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d-~~~~------~---~~~----~~~ 74 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFK-QNPI------S---KEE----RES 74 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHC-SSCC------C---HHH----HHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceec-cCCc------c---ccC----cch
Confidence 4568999999999999999999999999999999999999999999876212211 1000 0 000 000
Q ss_pred cccCCCCceEeeCCCCeEEeeCchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHHHH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (416)
.+ .....|.+++. |++++..+.+.++|.++|+.+|++|...+..|.+. +|+.+++|.+..+.+....++..+++.++
T Consensus 75 ~~-~~g~~~~~~l~-P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 75 KF-GKDRDWNVDLI-PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp HH-CCGGGCCEESS-CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred hc-ccccceeeccc-cceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 00 12245778995 99999999999999999999999999998878764 88999999986677877777888999999
Q ss_pred HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHHHHHHHHHh
Q 014883 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNS 259 (416)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 259 (416)
+|+..+..+....+.. .. ..++...|+.+|+++++.++.+++++.+.+.+.... +. ...++...+.++..|+.
T Consensus 152 ~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~-~~--~~~p~~~~~~~~~~~~~ 224 (453)
T 2bcg_G 152 KFLEWISSYKEDDLST---HQ-GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTND-DY--LQQPARPSFERILLYCQ 224 (453)
T ss_dssp HHHHHHHHCBTTBGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchh---hh-ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCc-cc--cCCchHHHHHHHHHHHH
Confidence 9998877654322210 00 012457899999999999999999887654432110 00 00133444555566777
Q ss_pred hhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCC
Q 014883 260 SIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVP 339 (416)
Q Consensus 260 s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~~~~ 339 (416)
+++.++. +++.||+||+++|+++|++.+++.|++|+++++|++|..+.+++++++|++ +|++++||+||+++.....
T Consensus 225 s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 225 SVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 6666653 347799999999999999999999999999999999987511467778886 6889999999976543211
Q ss_pred CCCCCchhhhhhhhhhccccCCcc-eEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCCeEEEEEecCCCccCCCCC
Q 014883 340 GSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (416)
Q Consensus 340 ~l~~~~~~~l~~~~~~~~~~~~~~-~~~k~i~i~~~p~~~--~~~~~~~~~pp~~~~~~~~~~v~~~~~~~~~~~~p~G~ 416 (416)
+ +. ... ...++++++++|+.. .+....+++|....+. .+.+||.+.+...+.||+|+
T Consensus 302 ~---------------l~---~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~--~~~~~v~~~s~~d~~aP~G~ 361 (453)
T 2bcg_G 302 K---------------CK---STGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGR--KSDIYVAIVSDAHNVCSKGH 361 (453)
T ss_dssp G---------------EE---EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTTC--SSCEEEEEEEGGGTSSCTTC
T ss_pred h---------------hc---ccCCcceeEEEEEccccCCCCCCccEEEEeCccccCC--CCCEEEEEeCCCCCCCCCCc
Confidence 1 10 123 578889999998863 3456677888654443 47899999987778999996
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=7.8e-37 Score=303.63 Aligned_cols=344 Identities=27% Similarity=0.521 Sum_probs=255.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccC-hhhhHhhhhcCCCCCCCCCCCcccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (416)
+.++||||||||++||+||++|+++|++|+|+|+++++||+++|++ +..... ..+.+.. .+..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~-~~~~~~~-------~~~~-------- 67 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYK-RFQLLEG-------PPET-------- 67 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHH-HTTCTTC-------CCGG--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHh-hccCCCC-------ChhH--------
Confidence 4578999999999999999999999999999999999999999998 532110 1110000 0000
Q ss_pred ccccCCCCceEeeCCCCeEEeeCchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHHH
Q 014883 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (416)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (416)
+ .....|.+|+ ||++++..+.+.+++.++|+.+|++|...+..|++. +|+.+.+|.+..+.+.....+..+++.+
T Consensus 68 --~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 68 --M-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp --G-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred --h-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 1 1225678999 599998888999999999999999999988877764 8899999998767777777777889999
Q ss_pred HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHHHHHHHHH
Q 014883 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (416)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 258 (416)
++|+..+.++....+... + ..++...|+.+|+++++.++.+++++.+.+++.. ..++ .+.++..++..+..|.
T Consensus 143 ~~~~~~~~~~~~~~p~~~---~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~-~~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKTF---E-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYR-TDDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGGG---T-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchhc---c-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhcc-CCCc--cCCCHHHHHHHHHHHH
Confidence 999988776543222111 1 1135678999999999999999998766533321 1111 1235555566677777
Q ss_pred hhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCC
Q 014883 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (416)
Q Consensus 259 ~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~~~ 338 (416)
.+++.++. +++++|+||+++|+++|++.+++.|++|+++++|++|..+ ++++++|+ .+|++++||+||++....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~- 289 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYV- 289 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGC-
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCC-
Confidence 76666653 3578999999999999999999999999999999999987 77777787 588899999999765432
Q ss_pred CCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCC--CCceEEEeCCCCCCCCCCCeEEEEEecCCCccCCCCC
Q 014883 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (416)
Q Consensus 339 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~--~~~~~~~~pp~~~~~~~~~~v~~~~~~~~~~~~p~G~ 416 (416)
+. .++ ......+++++.++|+... +....++||....+. .+.++|.+.+.+++.||+|+
T Consensus 290 ~~-------~~~----------~~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~~s~d~~~aP~G~ 350 (433)
T 1d5t_A 290 PD-------RVR----------KAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNR--KSDIYVCMISYAHNVAAQGK 350 (433)
T ss_dssp GG-------GEE----------EEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTTC--SSCEEEEEEEGGGTSSCTTC
T ss_pred cc-------ccc----------ccCcceeEEEEEcCcccccCCCceEEEEeCccccCC--CCCEEEEEECCCCcccCCCC
Confidence 11 010 0124666778889887632 356777888654432 47899999998999999996
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.1e-32 Score=278.95 Aligned_cols=335 Identities=13% Similarity=0.121 Sum_probs=197.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (416)
.+|||||||++||+||++|+++|++|+||||++++||+++|++.+|
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G---------------------------------- 47 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQG---------------------------------- 47 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETT----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCC----------------------------------
Confidence 5899999999999999999999999999999999999999987543
Q ss_pred CCCCceEeeCCCCeEEeeCchHHHHHHhcC--ccccccccccccee-eeccCCceeecCCChhhhhhc-CCCChHHHHHH
Q 014883 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATF-MLDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (416)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~g--~~~~~~f~~~~~~~-~~~~~g~~~~~p~~~~~~~~~-~~l~~~~k~~l 178 (416)
|.+|. ||+++...+.+.+++...+ +.+++++...++.+ +...+|+.+.++.+....... ..+++.+...+
T Consensus 48 -----~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 48 -----FTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp -----EEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred -----EEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 56788 4888766666666776655 56778888877766 333578888888775433221 22346677777
Q ss_pred HHHHHHHHhhcCCCcc---ccc------cccccccc----cCCcHHHHHHhcCCChhHHHHHHHH-HHhccCCchhhhhh
Q 014883 179 MRFFKLVQGHLSLDES---EEN------NVRISEED----LDSPFAEFLTKMKLPHKIKSIVLYA-IAMADYDQEVSEYV 244 (416)
Q Consensus 179 ~~~~~~~~~~~~~~~~---~~~------~~~~~~~~----~~~t~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 244 (416)
.+|++.++........ ..+ ........ ...++.++++++..++.++.++.+. ........ +
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~-----~ 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPF-----A 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC-------
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcc-----h
Confidence 7887766544321100 000 00000111 1146778888888888888876532 21111111 1
Q ss_pred hchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcE
Q 014883 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (416)
Q Consensus 245 ~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~ 324 (416)
.++. ..+..++. ...| .+||+||+++|+++|++.++++|++|++|++|++|+++ ++++++|+++||++
T Consensus 197 ~~~~---~~~~~~~~--~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSI---YTLIHALE--REWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCT---HHHHHHHH--SCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhh---hhhhhhhh--ccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 1221 11222221 1222 57999999999999999999999999999999999998 88999999999999
Q ss_pred EEcCEEEEC--CCCCCCCCCCCchhhhhhh-hhhccccCCcceEEEEEEEecCCCCCCCCceEEEeCCCC-CC-------
Q 014883 325 ILSHKLVLD--PSFTVPGSLASSHQQLQES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRS-LF------- 393 (416)
Q Consensus 325 i~Ad~VI~~--p~~~~~~l~~~~~~~l~~~-~~~~~~~~~~~~~~k~i~i~~~p~~~~~~~~~~~~pp~~-~~------- 393 (416)
+.||+||++ |..++..|... .+++.. ...+.......+..+..+.++++....+...++.-+... ..
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll~~--~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~ 342 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLLSQ--HPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHD 342 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCTTSCSEEEEEECC------------
T ss_pred EEcCEEEECCCHHHHHHHhccc--cccchhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhcccccccc
Confidence 999999954 55555554321 122222 222322223344556666677776654444333222110 00
Q ss_pred -CCCCCeEEEEEecC-CCccCCCCC
Q 014883 394 -PEQVTSIRVLQLGG-NLAVCPLGM 416 (416)
Q Consensus 394 -~~~~~~v~~~~~~~-~~~~~p~G~ 416 (416)
-...+.+++.+.+. |.+.+|+|+
T Consensus 343 ~~~~~~~~~v~~~s~~dp~~ap~G~ 367 (501)
T 4dgk_A 343 GLAEDFSLYLHAPCVTDSSLAPEGC 367 (501)
T ss_dssp -CCCEEEEEEECGGGTCGGGSSTTC
T ss_pred ccccCCceecccCCCCCCCcCCCCC
Confidence 01124566665543 577888885
No 6
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.95 E-value=1.4e-26 Score=235.30 Aligned_cols=295 Identities=14% Similarity=0.073 Sum_probs=192.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
+.++||||||||++||+||+.|+++|++|+|||+++++||+++|++...
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~------------------------------- 50 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQK------------------------------- 50 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTT-------------------------------
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCC-------------------------------
Confidence 3468999999999999999999999999999999999999999986531
Q ss_pred cccCCCCceEeeCCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHHH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (416)
.+.+|+ |++++.. ...+.+++.++|+..+..+..... +.+ .+|+.+.++... . ..+.+.+...+
T Consensus 51 -------g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~-~~~-~~g~~~~~~~~~----p-~~~~~~~~~~~ 115 (520)
T 1s3e_A 51 -------VKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEVERL-IHH-VKGKSYPFRGPF----P-PVWNPITYLDH 115 (520)
T ss_dssp -------TSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCSSEE-EEE-ETTEEEEECSSS----C-CCCSHHHHHHH
T ss_pred -------Cccccc-CceEecCCcHHHHHHHHHcCCcceecccCCce-EEE-ECCEEEEecCCC----C-CCCCHHHHHHH
Confidence 233677 4787744 347788899999876654432222 222 256666554321 0 01234444334
Q ss_pred HHHHHHHHhhcCC----CccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHHHHH
Q 014883 179 MRFFKLVQGHLSL----DESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRL 254 (416)
Q Consensus 179 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 254 (416)
.+++..+..+... .++.. ....++.+.++.+|+++...++.++.++...... .+..++ .++|+...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~--~~~s~~~~~--- 186 (520)
T 1s3e_A 116 NNFWRTMDDMGREIPSDAPWKA---PLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL-CVTAET--HEVSALWFL--- 186 (520)
T ss_dssp HHHHHHHHHHHTTSCTTCGGGS---TTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHH-HHSSCT--TTSBHHHHH---
T ss_pred HHHHHHHHHHHhhcCcCCCccc---cchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhh-hcCCCh--HHhHHHHHH---
Confidence 4444333222211 11100 0012356789999999988888887766532111 112222 245654433
Q ss_pred HHHHhhhccc----cC-CCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 014883 255 ALYNSSIGRF----QN-ALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (416)
Q Consensus 255 ~~~~~s~~~~----g~-~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~ 329 (416)
.++...+.. .. ..+.+.+++||+++|+++|++. +|++|++|++|++|..+ ++++ .|++.+|+++.||+
T Consensus 187 -~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~ 259 (520)
T 1s3e_A 187 -WYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENV-LVETLNHEMYEAKY 259 (520)
T ss_dssp -HHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSE-EEEETTSCEEEESE
T ss_pred -HHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeE-EEEECCCeEEEeCE
Confidence 233222110 00 1123578999999999988764 48899999999999876 4554 58888999999999
Q ss_pred EEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCC
Q 014883 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (416)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~ 378 (416)
||++ |...+.++ .++|+||..+.+..++..++.+.|.++.|++||-+
T Consensus 260 VI~a~p~~~l~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~ 307 (520)
T 1s3e_A 260 VISAIPPTLGMKI--HFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWR 307 (520)
T ss_dssp EEECSCGGGGGGS--EEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGG
T ss_pred EEECCCHHHHcce--eeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCccc
Confidence 9965 54444554 35678888877777788899999999999999743
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.94 E-value=1.1e-25 Score=224.62 Aligned_cols=293 Identities=11% Similarity=0.105 Sum_probs=185.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
+.++||||||||++||+||+.|+++|++|+|||+++++||++.+++..|
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 51 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG------------------------------- 51 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT-------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC-------------------------------
Confidence 4568999999999999999999999999999999999999999876532
Q ss_pred cccCCCCceEeeCCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHHH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (416)
+.+|+ |++++.. ...+.+++.++|+..+..+......+.. .+|+.+.+.... ..+++.....+
T Consensus 52 --------~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 52 --------AVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYIS-SAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp --------EEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEEC-TTSCEEEECSSS------CSCCHHHHHHH
T ss_pred --------ceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEEe-CCCceeeccCCC------CCCChhhHHHH
Confidence 33566 3665533 3467888889998776655433222222 125555443210 01223222222
Q ss_pred HHHHHHH----HhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhh-hhchhhHHHH
Q 014883 179 MRFFKLV----QGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (416)
Q Consensus 179 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~ 253 (416)
.+++..+ .......++... ...++.+.++.+|++++..++.++.++...+ ...+..++ . ++|+...+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~- 188 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWAHP---LARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVL- 188 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGGST---THHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHH-
T ss_pred HHHHHHHHHHHhhcCCCCCCCCc---chhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHH-
Confidence 2222211 111111111110 0123457899999999888888887665332 12222232 2 456544332
Q ss_pred HHHHHhhhccc----cCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 014883 254 LALYNSSIGRF----QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (416)
Q Consensus 254 ~~~~~~s~~~~----g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~ 329 (416)
++...+.+ ....+.+.+++||+++|+++|++ .+|++|++|++|++|..+ ++..+.|++ +|++++||+
T Consensus 189 ---~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~---~lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 189 ---MAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAE---ALGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp ---HHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHH---HHGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred ---HhccCCcHhhhccCCCcceEEEcCChHHHHHHHHH---hcCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 22222111 00001256899999999999875 358999999999999987 554245774 788999999
Q ss_pred EEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCC
Q 014883 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (416)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~ 377 (416)
||++ |...+.++ .++|+||..+....++..++.+.|..+.|++||-
T Consensus 260 VI~a~p~~~~~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (453)
T 2yg5_A 260 VILAVPPNLYSRI--SYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFW 306 (453)
T ss_dssp EEECSCGGGGGGS--EEESCCCHHHHHHGGGEEECCEEEEEEEESSCGG
T ss_pred EEEcCCHHHHhcC--EeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCC
Confidence 9964 54444554 2467788776666666778899999999999873
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.94 E-value=2.4e-25 Score=223.78 Aligned_cols=288 Identities=15% Similarity=0.176 Sum_probs=184.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (416)
.+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+|
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g--------------------------------- 62 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAG--------------------------------- 62 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETT---------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCC---------------------------------
Confidence 57999999999999999999999999999999999999999987543
Q ss_pred cCCCCceEeeCCCCeEEee-CchHHHHHHhcCcccccccccc--cceeeeccCCceeecCCChhhhhhcCCCChHHHHHH
Q 014883 102 SQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSI--DATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (416)
Q Consensus 102 ~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~--~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (416)
+.+|. |++++.. ...+.+++.++|+...+.+... ...+++. +|+.+.+|.+..+.+....++..++..+
T Consensus 63 ------~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 134 (478)
T 2ivd_A 63 ------YLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLRV 134 (478)
T ss_dssp ------EEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHHH
T ss_pred ------eeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHHH
Confidence 44777 4777754 3467888999998765544321 1234443 7888888887766665545544433321
Q ss_pred HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHH-HhccCCchhhhhhhchhhHHHHHHHH
Q 014883 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (416)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (416)
+...... . .....+.++.+|+++...++.++.++...+ .. +..++ .++|+...+..+..+
T Consensus 135 ------~~~~~~~-~--------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~~ 195 (478)
T 2ivd_A 135 ------AGELFSR-R--------APEGVDESLAAFGRRHLGHRATQVLLDAVQTGI--YAGDV--EQLSVAATFPMLVKM 195 (478)
T ss_dssp ------HGGGGCC-C--------CCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHH--HCCCT--TTBBHHHHCHHHHHH
T ss_pred ------hhhhhcC-C--------CCCCCCCCHHHHHHHhhCHHHHHHHHHHHhcee--ecCCH--HHhhHHHHhHHHHHH
Confidence 2222111 0 112456899999997543333333332111 11 12222 245554443333322
Q ss_pred Hhhhccc-----------------cCCC----ccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEE
Q 014883 258 NSSIGRF-----------------QNAL----GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKG 316 (416)
Q Consensus 258 ~~s~~~~-----------------g~~~----~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~g 316 (416)
....+.+ .... +.+++++||+++|+++|++.+ |++|+++++|++|..+ +++ +.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~~ 269 (478)
T 2ivd_A 196 EREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-WR 269 (478)
T ss_dssp HHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-CE
T ss_pred HHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-EE
Confidence 1110000 0000 237899999999999997654 7899999999999886 444 67
Q ss_pred EEe---CCCcEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCC
Q 014883 317 VRL---ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (416)
Q Consensus 317 V~l---~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~ 379 (416)
|++ .+|++++||+||++ |...+.++ .|++|+.+....++..++.+.+..+.+++|+-+.
T Consensus 270 v~~~~~~~g~~~~ad~vV~a~~~~~~~~l----l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~ 332 (478)
T 2ivd_A 270 LIIEEHGRRAELSVAQVVLAAPAHATAKL----LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPA 332 (478)
T ss_dssp EEEEETTEEEEEECSEEEECSCHHHHHHH----HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCC
T ss_pred EEEeecCCCceEEcCEEEECCCHHHHHHH----hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCC
Confidence 877 67888999999965 43332332 2345554444445567788999999999986443
No 9
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.93 E-value=1.8e-24 Score=214.00 Aligned_cols=276 Identities=14% Similarity=0.096 Sum_probs=171.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (416)
+||||||||++||+||++|+++|++|+||||++++||++.++..+|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G---------------------------------- 46 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG---------------------------------- 46 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----------------------------------
Confidence 5999999999999999999999999999999999999999986543
Q ss_pred CCCCceEeeCCCCeEEee---CchHHHHHHhcCcccccccccccceeeec-cC--------CceeecCCChhhhhhcCCC
Q 014883 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLD-AD--------AKLCSVPDSRAAIFKDKSL 170 (416)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~---~~~~~~~l~~~g~~~~~~f~~~~~~~~~~-~~--------g~~~~~p~~~~~~~~~~~l 170 (416)
|.+|. ||+++.. ...+.+++.++|+...+.... .....+. .+ ++.+.++. . ...+
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~ 113 (425)
T 3ka7_A 47 -----FQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFND----F--PSLL 113 (425)
T ss_dssp -----EEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGG----G--GGGS
T ss_pred -----cEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhh----h--hhhC
Confidence 34555 3543321 225677788888754322221 1111110 01 33333321 1 1235
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHH-HhccCCchhhhhhhchhh
Q 014883 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRD 249 (416)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~ 249 (416)
++.++..+...+..+.. ....+.++.+|++++..++.++.++.... .... .++ .++|+..
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALS--LKS--DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHS--SCG--GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhC--CCc--ccchHHH
Confidence 56666655443322110 01235789999998766666666543211 1111 122 2456544
Q ss_pred HHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCE
Q 014883 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (416)
Q Consensus 250 ~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~ 329 (416)
.+..+..+. ..+ + ..+++||++.|+++|++.+++.|++|+++++|++|..+ ++++++|++ +|++++||+
T Consensus 175 ~~~~~~~~~----~~~---~-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENMY----RFG---G-TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHHH----HHC---S-CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHHH----hcC---C-ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 443333221 122 1 46899999999999999999999999999999999987 777778886 588999999
Q ss_pred EEEC-CCCCCCCCCCCchhhh--hhh-hhhccccCCcceEEEEEEEecCCCC
Q 014883 330 LVLD-PSFTVPGSLASSHQQL--QES-FQAFSLSDNKGKVARGICITRSSLK 377 (416)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l--~~~-~~~~~~~~~~~~~~k~i~i~~~p~~ 377 (416)
||++ |.....+|... .+.+ +.. +..+ ++.....+.+..+.+++|+.
T Consensus 244 VV~a~~~~~~~~ll~~-~~~~~~~~~~~~~~-~~~~~~~~~~v~l~~~~~~~ 293 (425)
T 3ka7_A 244 VISNLGHAATAVLCSE-ALSKEADAAYFKMV-GTLQPSAGIKICLAADEPLV 293 (425)
T ss_dssp EEECSCHHHHHHHTTT-TCCTTTTHHHHHHH-HHCCCBEEEEEEEEESSCSS
T ss_pred EEECCCHHHHHHhcCC-cccccCCHHHHHHh-hCcCCCceEEEEeecCCCcc
Confidence 9964 33322333211 1111 222 2222 23345567788888998864
No 10
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.93 E-value=4e-25 Score=223.20 Aligned_cols=295 Identities=15% Similarity=0.107 Sum_probs=184.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (416)
+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+|
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g---------------------------------- 85 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDG---------------------------------- 85 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETT----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCC----------------------------------
Confidence 8999999999999999999999999999999999999999986532
Q ss_pred CCCCceEeeCCCCeEEee-CchHHHHHHhcCccccccccc----ccceeeeccC--CceeecCCChhhhhhcCCCChHHH
Q 014883 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (416)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~----~~~~~~~~~~--g~~~~~p~~~~~~~~~~~l~~~~k 175 (416)
+.+|+ |++++.. ...+.+++.++|+.+.+.... ....+++. + |+...+|.. +... .-.
T Consensus 86 -----~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 86 -----YPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp -----EEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred -----eeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 44777 4787743 447888888888854433321 12233332 3 444444421 1100 000
Q ss_pred HHHHHHHH----HHHhhcCCCccccccccccccccCCcHHHHHHhcC--CChhHHHHHHHHHHhccCCchhhhhhhchhh
Q 014883 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (416)
Q Consensus 176 ~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 249 (416)
..+.+|++ ..+.... .+..........++.+.|+.+|+++++ .++.++.++...+... +..++ .++|+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLP-FPHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCS-CTTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCC-CCCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11122222 0111100 000000000112345789999999887 7887776655322111 11121 2356544
Q ss_pred HHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcC-cEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcC
Q 014883 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (416)
Q Consensus 250 ~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad 328 (416)
.+..+......+..+.. ....++++||+++|+++|++.+...| ++|+++++|++|..+ ++. +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMD-CLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHH-HHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHh-hhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 33322111000000000 01246899999999999999998888 999999999999976 444 56888888899999
Q ss_pred EEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCC
Q 014883 329 KLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (416)
Q Consensus 329 ~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~ 376 (416)
+||++ |...+.++ .+.|+||+.+.+..+...++.+.|..+.|++|+
T Consensus 303 ~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 303 RVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 99954 44444554 356788877666666677889999999999876
No 11
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.93 E-value=1e-24 Score=215.74 Aligned_cols=274 Identities=12% Similarity=0.096 Sum_probs=168.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (416)
+||||||||++||+||+.|+++|++|+||||++++||++.++..+|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g---------------------------------- 46 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKG---------------------------------- 46 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCC----------------------------------
Confidence 3999999999999999999999999999999999999999986543
Q ss_pred CCCCceEeeCCCCeEEee---CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHHHH
Q 014883 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (416)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~---~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (416)
|.+|. ||+++.. ...+.+++.++++. .++...++...+..+|+.++++... ..+++.++..+.
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 47 -----FQLST-GALHMIPHGEDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp -----EEEES-SSCSEETTTTSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred -----EEEec-CCeEEEccCCChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 44676 4654432 23677788887764 3333333322111267777776421 234556666655
Q ss_pred HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcC-CChhHHHHHHHH-HHhccCCchhhhhhhchhhHHHHHHHH
Q 014883 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYA-IAMADYDQEVSEYVLKTRDGINRLALY 257 (416)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (416)
+++..+... . ....+.++.+|+++++ .++.++.++... ..... .++ .++|+...+..+..+
T Consensus 113 ~~~~~~~~~--~-----------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMN--K-----------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADS--VSL--SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTT--C-----------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHS--SCG--GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhc--c-----------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcC--CCc--ccCCHHHHHHHHHHH
Confidence 544433211 0 0123478999999873 444455544321 11111 121 245654444433332
Q ss_pred HhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCC
Q 014883 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSF 336 (416)
Q Consensus 258 ~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~ 336 (416)
. .++ + +.+|+||+++|+++|++.+++.|++|+++++|++|..+ ++++ |+ .+|++++||+||++ +..
T Consensus 176 ~----~~~---g-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V~-~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWG---G-PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--YT-RDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHC---S-CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--EE-TTCCEEECSEEEECSCHH
T ss_pred h----hcC---C-cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--EE-eCCcEEEeCEEEECCCHH
Confidence 1 122 1 56999999999999999999999999999999999875 5654 64 68889999999954 333
Q ss_pred CCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCC
Q 014883 337 TVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (416)
Q Consensus 337 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~ 376 (416)
...+|.. .+.+|..+..-..+.......+..+.++++.
T Consensus 243 ~~~~ll~--~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 280 (421)
T 3nrn_A 243 ETVKLIG--RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEP 280 (421)
T ss_dssp HHHHHHC--GGGSCHHHHHHHHTCCCCCEEEEEEEEESSC
T ss_pred HHHHhcC--cccCCHHHHHHHhCCCCCceEEEEEEEcCCc
Confidence 3233321 1223332221122234446777777888874
No 12
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=218.11 Aligned_cols=295 Identities=14% Similarity=0.096 Sum_probs=176.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (416)
+||||||||++||+||++|+++|+ +|+|||+++++||+++++...+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~-------------------------------- 50 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPN-------------------------------- 50 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTT--------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccC--------------------------------
Confidence 699999999999999999999999 9999999999999999975421
Q ss_pred ccCCCCceEeeCCCCeEEeeC----chHHHHHHhcCccccccccc-----ccceeeeccCCceeecCCChhhhhhcCCCC
Q 014883 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKDKSLG 171 (416)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~----~~~~~~l~~~g~~~~~~f~~-----~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~ 171 (416)
++.+|. ||+++... ..+.+++.++|+...+.... ....+++. +|+.+++|.+...++.. +.
T Consensus 51 ------g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~--~~ 120 (477)
T 3nks_A 51 ------GAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRP--SP 120 (477)
T ss_dssp ------SCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---C--CT
T ss_pred ------CeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccc--cc
Confidence 244677 47765432 35678888898875433221 11234444 78888888654333321 11
Q ss_pred hHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHH
Q 014883 172 LMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGI 251 (416)
Q Consensus 172 ~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 251 (416)
+..+..+.+ .+..+.. + .....+.++.+|+++..-.+....++... ....+..++ .++|+...+
T Consensus 121 ~~~~~~~~~---~~~~~~~--~--------~~~~~~~s~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~--~~ls~~~~~ 184 (477)
T 3nks_A 121 PFSKPLFWA---GLRELTK--P--------RGKEPDETVHSFAQRRLGPEVASLAMDSL-CRGVFAGNS--RELSIRSCF 184 (477)
T ss_dssp TSCSCSSHH---HHTTTTS--C--------CCCSSCCBHHHHHHHHHCHHHHHHTHHHH-HHHHHSSCT--TTBBHHHHC
T ss_pred hhhhHHHHH---HHHhhhc--C--------CCCCCCcCHHHHHHHhhCHHHHHHHHHHH-hcccccCCH--HHhhHHHHH
Confidence 111111111 1111111 0 11234679999998632222222222211 111122222 245665544
Q ss_pred HHHHHHHhhhccc----------------------cCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEec
Q 014883 252 NRLALYNSSIGRF----------------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQ 309 (416)
Q Consensus 252 ~~~~~~~~s~~~~----------------------g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~ 309 (416)
..+..+....+.. ......+++++||++.|+++|++.+...|++|++|++|++|..+
T Consensus 185 ~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~- 263 (477)
T 3nks_A 185 PSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ- 263 (477)
T ss_dssp HHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-
T ss_pred HHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-
Confidence 4433321111100 00011368999999999999999999999999999999999886
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCCCCc
Q 014883 310 NSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSN 382 (416)
Q Consensus 310 ~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~~~~ 382 (416)
++..+.|++ +++++.||+||++ |...+.++..+..+++ ...+ ....+..+.++.+.|++|+-+....
T Consensus 264 -~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~---~~~l-~~~~~~~~~~v~l~~~~~~~~~~~~ 331 (477)
T 3nks_A 264 -AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPL---ARAL-SAITAVSVAVVNLQYQGAHLPVQGF 331 (477)
T ss_dssp -GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHH---HHHH-HTCCEEEEEEEEEEETTCCCSSCSS
T ss_pred -CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHH---HHHH-hcCCCCcEEEEEEEECCCCCCCCCc
Confidence 444457764 6678999999964 5443334322222222 2223 3346788889999999987654333
No 13
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.92 E-value=3.3e-24 Score=215.30 Aligned_cols=301 Identities=15% Similarity=0.161 Sum_probs=184.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (416)
|.++||||||||++||+||+.|+++| ++|+|||+++++||+++|....|
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----------------------------- 52 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----------------------------- 52 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT-----------------------------
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC-----------------------------
Confidence 34689999999999999999999999 99999999999999999986533
Q ss_pred cccccCCCCceEeeCCCCeEEe-eCchHHHHHHhcCcccccccccccceeeeccCCceeecCCC--------hhhhhhcC
Q 014883 98 SRLLSQHPRNFNLDVSGPRVLF-CADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDK 168 (416)
Q Consensus 98 ~~~~~~~~~~~~~dl~Gp~~~~-~~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~--------~~~~~~~~ 168 (416)
+.+|. |++++. ....+.+++.++|+...+........+++. +|+...+|.. ...+++..
T Consensus 53 ----------~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~ 120 (475)
T 3lov_A 53 ----------FTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTT 120 (475)
T ss_dssp ----------CCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCS
T ss_pred ----------EEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhcc
Confidence 23566 365553 344788889999987665443233344443 6777776643 34455555
Q ss_pred CCChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchh
Q 014883 169 SLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTR 248 (416)
Q Consensus 169 ~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 248 (416)
.++..++.. +......... . ......+.++.+|+++..-.+....++... ....+..++ .++|+.
T Consensus 121 ~~~~~~~~~---~~~~~~~~~~--~-------~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~--~~ls~~ 185 (475)
T 3lov_A 121 LLTEEEKQE---VADLLLHPSD--S-------LRIPEQDIPLGEYLRPRLGDALVEKLIEPL-LSGIYAGNI--DQMSTF 185 (475)
T ss_dssp SSCHHHHHH---HHHHHHSCCT--T-------CCCCSSCCBHHHHHHHHHCHHHHHHTHHHH-HHGGGCCCT--TTSBST
T ss_pred CCChhHHHH---hhCcccCCcc--c-------ccCCCCCcCHHHHHHHHhCHHHHHHHHHHH-hceeecCCh--HHcCHH
Confidence 666555542 2222111100 0 011345689999998742222233333221 111222222 245655
Q ss_pred hHHHHHHHHHhhhccc-------c-------------CCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEe
Q 014883 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (416)
Q Consensus 249 ~~~~~~~~~~~s~~~~-------g-------------~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (416)
..+..+..+....+.+ . ...+.+.+++||++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444443322211110 0 00134789999999999988764432 799999999999987
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCCCCceEEEe
Q 014883 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (416)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~~~~~~~~~ 387 (416)
++. +.|++.+| +++||+||++ |...+.++.. ++++ ...++..++.+.+..+.|++|+....+..-+++
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~--~~~~-----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~ 332 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLLP--DAHL-----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVV 332 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHCT--TSCC-----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEE
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHcC--ccCH-----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEe
Confidence 444 56887788 8999999954 5443334321 2222 122445788999999999999922223334445
Q ss_pred CC
Q 014883 388 PP 389 (416)
Q Consensus 388 pp 389 (416)
|+
T Consensus 333 ~~ 334 (475)
T 3lov_A 333 NR 334 (475)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 14
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.92 E-value=2.5e-24 Score=215.53 Aligned_cols=297 Identities=12% Similarity=0.138 Sum_probs=172.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G------~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (416)
++||||||||++||+||+.|+++| ++|+|||+++++||++.|...+|
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g--------------------------- 57 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG--------------------------- 57 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT---------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC---------------------------
Confidence 489999999999999999999999 99999999999999999976533
Q ss_pred cccccccCCCCceEeeCCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCCh--------hhhhh
Q 014883 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (416)
Q Consensus 96 ~~~~~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~--------~~~~~ 166 (416)
+.+|. |++++.. ...+.+++.++|+...+........+++. +|+...+|... ..++.
T Consensus 58 ------------~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 58 ------------YIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp ------------CCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred ------------EEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 23666 4665533 44678889999987765433233344443 67777776431 11111
Q ss_pred cCCCChHHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhc
Q 014883 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLK 246 (416)
Q Consensus 167 ~~~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 246 (416)
...++..++.. ....... . ......+.++.+|+++....+....++... ....+..++ .++|
T Consensus 124 ~~~~~~~~~~~--~~~~~~~---~----------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~s 185 (470)
T 3i6d_A 124 TGLFSLSGKAR--AAMDFIL---P----------ASKTKDDQSLGEFFRRRVGDEVVENLIEPL-LSGIYAGDI--DKLS 185 (470)
T ss_dssp ------CCSHH--HHHHHHS---C----------CCSSSSCCBHHHHHHHHSCHHHHHHTHHHH-HHHTTCSCT--TTBB
T ss_pred cCcCCHHHHHH--HhcCccc---C----------CCCCCCCcCHHHHHHHhcCHHHHHHhccch-hcEEecCCH--HHhh
Confidence 11111111111 0011100 0 012345689999998743333333333221 111122222 2345
Q ss_pred hhhHHHHHHHHHhhhcccc-----------------CCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEec
Q 014883 247 TRDGINRLALYNSSIGRFQ-----------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQ 309 (416)
Q Consensus 247 ~~~~~~~~~~~~~s~~~~g-----------------~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~ 309 (416)
+...+..+..+....+... ...+.+.+++||++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~- 262 (470)
T 3i6d_A 186 LMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS- 262 (470)
T ss_dssp HHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC-
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc-
Confidence 4333222111111000000 00124778999999999988764322 799999999999986
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCCC-CceEEEe
Q 014883 310 NSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL-SNFLVIF 387 (416)
Q Consensus 310 ~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~~-~~~~~~~ 387 (416)
++. +.|++.+|++++||+||++ |...+.++.. ++++.. ..++..++.+.+..+.|++|+-+.+ ...-+++
T Consensus 263 -~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~--~~~~~~----~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~ 334 (470)
T 3i6d_A 263 -GSC-YSLELDNGVTLDADSVIVTAPHKAAAGMLS--ELPAIS----HLKNMHSTSVANVALGFPEGSVQMEHEGTGFVI 334 (470)
T ss_dssp -SSS-EEEEESSSCEEEESEEEECSCHHHHHHHTT--TSTTHH----HHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEE
T ss_pred -CCe-EEEEECCCCEEECCEEEECCCHHHHHHHcC--CchhhH----HHhcCCCCceEEEEEEECchhcCCCCCCeEEEc
Confidence 444 5788889989999999954 5443333321 223322 2234568889999999999985433 3334444
Q ss_pred C
Q 014883 388 P 388 (416)
Q Consensus 388 p 388 (416)
|
T Consensus 335 ~ 335 (470)
T 3i6d_A 335 S 335 (470)
T ss_dssp C
T ss_pred c
Confidence 5
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.92 E-value=8.1e-24 Score=214.09 Aligned_cols=296 Identities=12% Similarity=0.083 Sum_probs=176.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
...+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+|
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 59 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDG------------------------------- 59 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETT-------------------------------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCC-------------------------------
Confidence 3468999999999999999999999999999999999999999976532
Q ss_pred cccCCCCceEeeCCCCeEEee-CchHHHHHHhcCccccccccccc-ceeeeccCCceeecCCChhhhhhcCCCChHHHHH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~-~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (416)
+.+|. |++++.. ...+.+++.++|+...+.|.... ..+++ .+|+.+.+|.+...++....++..++..
T Consensus 60 --------~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~-~~g~~~~~p~~~~~~~~~~~~~~~~~~~ 129 (504)
T 1sez_A 60 --------LIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIA-RNGTPVLLPSNPIDLIKSNFLSTGSKLQ 129 (504)
T ss_dssp --------EEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEE-SSSSEEECCSSHHHHHHSSSSCHHHHHH
T ss_pred --------eEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEE-ECCeEEECCCCHHHHhccccCCHHHHHH
Confidence 44677 4777643 34788899999998766664322 23344 3788888888766666555555544433
Q ss_pred HHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHHhccCCchhhhhhhchhhHHHHHHH
Q 014883 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLAL 256 (416)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~ 256 (416)
+. ......... .. . .....+.|+.+|+++..-++.++.++.. .... +..++ .++|+...+..+..
T Consensus 130 ~~--~~~~~~~~~-~~-----~--~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~ 195 (504)
T 1sez_A 130 ML--LEPILWKNK-KL-----S--QVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGT--CGGDP--DSLSMHHSFPELWN 195 (504)
T ss_dssp HH--THHHHC------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHH--HSCCG--GGSBHHHHCHHHHH
T ss_pred Hh--HhhhccCcc-cc-----c--ccCCCCccHHHHHHHHcCHHHHHHHHHHHHccc--cCCCh--HHhhHHHHhHHHHH
Confidence 21 111110000 00 0 0123458999999865333333333321 1111 22222 24555443322221
Q ss_pred HHhh------------hccccC-------------CCccEEeecCCcchHHHHHHHHHHhcC-cEEEcCCceeEEEEecC
Q 014883 257 YNSS------------IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQN 310 (416)
Q Consensus 257 ~~~s------------~~~~g~-------------~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~ 310 (416)
+... +...+. ....+++++||+++|+++|++ .+| ++|++|++|++|..+.
T Consensus 196 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~~- 271 (504)
T 1sez_A 196 LEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCSC- 271 (504)
T ss_dssp HHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEEC-
T ss_pred HHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEecC-
Confidence 1110 000000 001256899999999998875 456 8999999999999872
Q ss_pred CCc----EEEEEeC--CC---cEEEcCEEEEC-CCCCCCCCCC-CchhhhhhhhhhccccCCcceEEEEEEEecCCCC
Q 014883 311 SGS----YKGVRLA--SG---QDILSHKLVLD-PSFTVPGSLA-SSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (416)
Q Consensus 311 ~g~----~~gV~l~--~G---~~i~Ad~VI~~-p~~~~~~l~~-~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~ 377 (416)
++. .+.|++. +| ++++||+||++ |...+.++.. ...+++++.. .++..+..+.+..+.|++++-
T Consensus 272 ~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~~~~~ 346 (504)
T 1sez_A 272 TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF---IPEVDYVPLSVVITTFKRENV 346 (504)
T ss_dssp SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT---SCCCCEEEEEEEEEEEEGGGB
T ss_pred CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH---HhcCCCCceEEEEEEEchhhc
Confidence 331 2456554 45 57899999965 4433344431 0012232221 233456678899999998863
No 16
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.91 E-value=8.6e-24 Score=214.15 Aligned_cols=293 Identities=15% Similarity=0.077 Sum_probs=163.7
Q ss_pred cccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (416)
.+||||||||++||+||++|+++ |++|+||||++++||+++|+...
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~--------------------------------- 56 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTP--------------------------------- 56 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECT---------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEec---------------------------------
Confidence 58999999999999999999984 99999999999999999985321
Q ss_pred ccCCCCceEeeCCCCeEEeeCc-hHHHHHHhcCcccccccccccc-eeeeccCCceeecCCChhhhhhcCCCChHHHHHH
Q 014883 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDA-TFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (416)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~~-~~~~~l~~~g~~~~~~f~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (416)
.+|.+|. ||++++... .+.+++.+.+... .+|...++ .+++. +|+.+++|... .+ ..+........
T Consensus 57 -----~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~-~g~~~~~p~~~--~~--~~~~~~~~~~~ 124 (513)
T 4gde_A 57 -----EGFLYDV-GGHVIFSHYKYFDDCLDEALPKE-DDWYTHQRISYVRC-QGQWVPYPFQN--NI--SMLPKEEQVKC 124 (513)
T ss_dssp -----TSCEEES-SCCCCCCCBHHHHHHHHHHSCSG-GGEEEEECCEEEEE-TTEEEESSGGG--GG--GGSCHHHHHHH
T ss_pred -----CCEEEEe-CceEecCCCHHHHHHHHHhCCcc-ceeEEecCceEEEE-CCeEeecchhh--hh--hhcchhhHHHH
Confidence 2356788 588876554 6677777765432 23333332 23443 78888887531 11 12233333222
Q ss_pred -HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHH-HH-HHHHhccCCchhhhhhhchhhHHH---
Q 014883 179 -MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSI-VL-YAIAMADYDQEVSEYVLKTRDGIN--- 252 (416)
Q Consensus 179 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~s~~~~~~--- 252 (416)
..++....... .......++.+|+.+.. .+.+.+. +. +...... .++ .++++.+...
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~~-g~~l~~~~~~~~~~~~~~--~~~--~~ls~~~~~~~~~ 187 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRMM-GTGIADLFMRPYNFKVWA--VPT--TKMQCAWLGERVA 187 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHHH-HHHHHHHTHHHHHHHHHS--SCG--GGBCSGGGCSSCC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHhh-hhhhhhhhcchhhhhhcc--CCh--HHhhHHHHHHhhc
Confidence 22222211110 11223467888876421 1122221 11 1111111 111 1233222111
Q ss_pred ------HHHHHHhh--hccccCCCccEE-eecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc
Q 014883 253 ------RLALYNSS--IGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ 323 (416)
Q Consensus 253 ------~~~~~~~s--~~~~g~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~ 323 (416)
.+...+.. ...++.. ..+. .++||+++|+++|++.+...|++|++|++|++|..+ ++ .|++.+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G~ 261 (513)
T 4gde_A 188 APNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDGT 261 (513)
T ss_dssp CCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTSC
T ss_pred ccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCCC
Confidence 11111110 0111111 1233 458999999999999888999999999999999875 54 35578999
Q ss_pred EEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCC-CCCceEEEeC
Q 014883 324 DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP-DLSNFLVIFP 388 (416)
Q Consensus 324 ~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~-~~~~~~~~~p 388 (416)
++.||+||++ |...+.++.. ++++.... ...++..+....+.++.+... ..+...+.+|
T Consensus 262 ~~~ad~vI~t~P~~~l~~~l~--~~~~~~~~----~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~ 322 (513)
T 4gde_A 262 TIGYKKLVSTMAVDFLAEAMN--DQELVGLT----KQLFYSSTHVIGVGVRGSRPERIGDKCWLYFP 322 (513)
T ss_dssp EEEEEEEEECSCHHHHHHHTT--CHHHHHHH----TTCCEEEEEEEEEEEESSCCTTTTTCCEEECC
T ss_pred EEECCEEEECCCHHHHHHhcC--chhhHhhh----hcccCCceEEEEEEEeccccccccccceeecc
Confidence 9999999965 4333333321 12222222 223455566555666665432 2233444444
No 17
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.90 E-value=6.4e-23 Score=208.15 Aligned_cols=282 Identities=15% Similarity=0.134 Sum_probs=161.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (416)
+..+||||||||++||+||+.|+++| ++|+|||+++++||+++|++..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------- 54 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------- 54 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------------------
Confidence 45689999999999999999999999 9999999999999999997641
Q ss_pred ccccCCCCceEeeCCCCeEEee--CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChH-HH
Q 014883 99 RLLSQHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLM-EK 175 (416)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~--~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~-~k 175 (416)
.++.+|+ |++++.. ...+.+++.++++.... ..+.+. +|....++.+...+......... -.
T Consensus 55 -------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (516)
T 1rsg_A 55 -------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDGR------TRFVFD-DDNFIYIDEERGRVDHDKELLLEIVD 119 (516)
T ss_dssp -------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHCC------CCEECC-CCCCEEEETTTEECTTCTTTCHHHHH
T ss_pred -------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCcc------eeEEEC-CCCEEEEcCCCccccccHHHHHHHHH
Confidence 1244788 5888753 34566666665542210 011111 23322222211000000000000 01
Q ss_pred HHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhc------CCChhHHHHHHHHHHhc-c-CCchhhhhhhch
Q 014883 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIAMA-D-YDQEVSEYVLKT 247 (416)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~------~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~s~ 247 (416)
..+.++... .... .....+.++.+|+.++ .+++....++...+... . +..+. .++|+
T Consensus 120 ~~~~~~~~~---~~~~----------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~--~~~s~ 184 (516)
T 1rsg_A 120 NEMSKFAEL---EFHQ----------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW--KLLSA 184 (516)
T ss_dssp HHHHHHHHH---HC-----------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT--TTSBH
T ss_pred HHHHHHHHH---Hhhh----------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh--HHCCh
Confidence 112222221 1100 0122457788877642 12222222111111000 0 00000 12332
Q ss_pred hhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEc
Q 014883 248 RDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILS 327 (416)
Q Consensus 248 ~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~A 327 (416)
.. .+ .... +...+++| ++.|+++|++.+ .+++|++|++|++|..+ ++..+.|++.+|++++|
T Consensus 185 ~~-------~~---~~~~---~~~~~~~g-~~~l~~~l~~~l--~~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~~a 246 (516)
T 1rsg_A 185 KD-------TY---FGHQ---GRNAFALN-YDSVVQRIAQSF--PQNWLKLSCEVKSITRE--PSKNVTVNCEDGTVYNA 246 (516)
T ss_dssp HH-------HC---CCCS---SCCEEESC-HHHHHHHHHTTS--CGGGEETTCCEEEEEEC--TTSCEEEEETTSCEEEE
T ss_pred HH-------HH---hhcc---CcchhhhC-HHHHHHHHHHhC--CCCEEEECCEEEEEEEc--CCCeEEEEECCCcEEEC
Confidence 11 11 0111 12346777 999988886533 23689999999999985 33336888889989999
Q ss_pred CEEEEC-CCCCCCCC---------CCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCCC
Q 014883 328 HKLVLD-PSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL 380 (416)
Q Consensus 328 d~VI~~-p~~~~~~l---------~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~~ 380 (416)
|+||++ |...+... .+.+.|+||..+.+..++..++.+.|.++.|++||=++.
T Consensus 247 d~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~ 309 (516)
T 1rsg_A 247 DYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNE 309 (516)
T ss_dssp EEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCS
T ss_pred CEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCC
Confidence 999965 43332210 145788999988888888899999999999999985443
No 18
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.87 E-value=3.1e-21 Score=191.17 Aligned_cols=287 Identities=14% Similarity=0.081 Sum_probs=170.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (416)
+||||||||++||+||+.|+++|++|+|||+++++||++.+.+..-
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~c---------------------------------- 47 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRN---------------------------------- 47 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSS----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccC----------------------------------
Confidence 7999999999999999999999999999999999999999865420
Q ss_pred CCCCceEeeCCCCeEEee--CchHHHHHHhcCcccccccccccceeee-ccCCceeec-CCChhhhhhcCCCChHHHHHH
Q 014883 103 QHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQL 178 (416)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~--~~~~~~~l~~~g~~~~~~f~~~~~~~~~-~~~g~~~~~-p~~~~~~~~~~~l~~~~k~~l 178 (416)
...+.++++ ++++.. ...+.+++.++|+......... ...+ ..++..... |... ... ..-+..+
T Consensus 48 --ipg~~~~~g-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~ 115 (431)
T 3k7m_X 48 --VPGLRVEIG-GAYLHRKHHPRLAAELDRYGIPTAAASEFT--SFRHRLGPTAVDQAFPIPG-SEA------VAVEAAT 115 (431)
T ss_dssp --STTCEEESS-CCCBCTTTCHHHHHHHHHHTCCEEECCCCC--EECCBSCTTCCSSSSCCCG-GGH------HHHHHHH
T ss_pred --CCCceEecC-CeeeCCCCcHHHHHHHHHhCCeeeecCCCC--cEEEEecCCeecCCCCCCH-HHH------HHHHHHH
Confidence 012336663 666533 3466777777777543222111 1111 112222111 1100 000 0011222
Q ss_pred HHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHH-hccCCchhhhhhhchhhHHHHHHHH
Q 014883 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIA-MADYDQEVSEYVLKTRDGINRLALY 257 (416)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (416)
.++......+....++.. ....++. .++.+|+++.+.++..+.++...+. ... .+. .++|....+. +
T Consensus 116 ~~l~~~~~~~~~~~~~~~---~~~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~s~~~~~~----~ 183 (431)
T 3k7m_X 116 YTLLRDAHRIDLEKGLEN---QDLEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLG--QPA--DQASALWMLQ----L 183 (431)
T ss_dssp HHHHHHHTTCCTTTCTTS---SSCGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHS--SCT--TTSBHHHHHH----H
T ss_pred HHHHHHHHhcCCCCCccC---cchhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcC--CCh--hhhhHHHHHH----H
Confidence 333333332221111110 0112333 8999999998888877765432211 111 111 1345443322 2
Q ss_pred Hhhhcc-cc--CCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-
Q 014883 258 NSSIGR-FQ--NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD- 333 (416)
Q Consensus 258 ~~s~~~-~g--~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~- 333 (416)
+...+. +. -..... ++.+|++.+.++++ +..| +|++|++|++|..+ ++. +.|++.+|++++||+||+.
T Consensus 184 ~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vi~a~ 255 (431)
T 3k7m_X 184 VAAHHYSILGVVLSLDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDV-VNVTVKDGHAFQAHSVIVAT 255 (431)
T ss_dssp HHHTTSCHHHHHHTCCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSS-EEEEETTSCCEEEEEEEECS
T ss_pred HHhcCCccceeecchhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCe-EEEEECCCCEEEeCEEEEec
Confidence 221110 00 000113 78999999998764 4567 99999999999876 444 4688888988999999954
Q ss_pred CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCC
Q 014883 334 PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (416)
Q Consensus 334 p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~ 377 (416)
|...+..+ .+.|+||..+....+...++..+|..+.+++++.
T Consensus 256 ~~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 256 PMNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp CGGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred CcchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 44444443 4678888877766666678889999999999984
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.87 E-value=2.7e-21 Score=194.02 Aligned_cols=288 Identities=11% Similarity=0.090 Sum_probs=166.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
..+||+|||||++||++|..|+++|+ +|+|+|+++++||++++....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~------------------------------- 51 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG------------------------------- 51 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETT-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCC-------------------------------
Confidence 45899999999999999999999999 8999999999999999976432
Q ss_pred cccCCCCceEeeCCCCeEEee-----CchHHHHHHh-cCcccccc-cccccceeeeccCCceeecCCChhhhhhcCCCCh
Q 014883 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYLE-FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~-----~~~~~~~l~~-~g~~~~~~-f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~ 172 (416)
+.+|+ |++++.. ...+.+++.+ +|+..+.. +... ..+++..+|+.++.+.. .+.+.
T Consensus 52 --------~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~------ 114 (472)
T 1b37_A 52 --------INVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE------ 114 (472)
T ss_dssp --------EEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH------
T ss_pred --------cEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH------
Confidence 34777 4787752 2367888888 78866432 2211 11233335554322110 00000
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHH--HHHhcC---CChhHHHHHHHHHHhccCCchhhhhhhch
Q 014883 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMK---LPHKIKSIVLYAIAMADYDQEVSEYVLKT 247 (416)
Q Consensus 173 ~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~--~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 247 (416)
....+.++...+..... ..++.+.++.+ ++.+.. ....+..++........+..++ ...|+
T Consensus 115 -~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~ 180 (472)
T 1b37_A 115 -LADSVEEMGEKLSATLH-----------ASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPP--RVTSL 180 (472)
T ss_dssp -HHHHHHHHHHHHHHTSC-----------TTCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCG--GGBBS
T ss_pred -HHHHHHHHHHHHHHhhc-----------cccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccc--cccch
Confidence 00112222221111100 01223445443 554432 1111222222111000001111 11232
Q ss_pred hhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhc--------CcEEEcCCceeEEEEecCCCcEEEEEe
Q 014883 248 RDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGVRL 319 (416)
Q Consensus 248 ~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~--------Gg~i~l~~~V~~I~~~~~~g~~~gV~l 319 (416)
...+. ...|. .++. ...+..++||++.|+++|++.+... |++|+++++|++|..+ ++. +.|++
T Consensus 181 ~~~~~-~~~~~----~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~-v~v~~ 251 (472)
T 1b37_A 181 QNTVP-LATFS----DFGD-DVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGG-VTVKT 251 (472)
T ss_dssp TTTSS-CHHHH----HHCS-EEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSC-EEEEE
T ss_pred hhccc-ccccc----ccCC-ceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCc-EEEEE
Confidence 11110 00111 1121 0113345899999999998765443 7899999999999986 444 45888
Q ss_pred CCCcEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCC
Q 014883 320 ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (416)
Q Consensus 320 ~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~ 379 (416)
.+|++++||+||++ |...+..+.+.+.|+||+.+.+..++..++.+.|.++.|++||-++
T Consensus 252 ~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~ 312 (472)
T 1b37_A 252 EDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPE 312 (472)
T ss_dssp TTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCC
T ss_pred CCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCC
Confidence 89999999999965 4444344434567888887666666667899999999999998554
No 20
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.87 E-value=1.5e-21 Score=196.20 Aligned_cols=315 Identities=13% Similarity=0.131 Sum_probs=175.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCccccc-ChhhhHhhhhcCCCCCCCCCCCcccccccccccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (416)
..+||+|||||++||+||+.|+++| ++|+|+|+++++||+++++ ..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 56 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDEN------------------------------- 56 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTT-------------------------------
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCC-------------------------------
Confidence 4689999999999999999999999 8999999999999999985 332
Q ss_pred ccccCCCCceEeeCCCCeEEeeCc-hHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHH
Q 014883 99 RLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (416)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~~-~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (416)
++.+|.+ +++++... .+.+++.+.. .++..... ..+++. +|+.+++|... .+ ..++..++..
T Consensus 57 --------g~~~~~g-~~~~~~~~~~~~~l~~~~~-~~~~~~~~--~~~~~~-~g~~~~~P~~~--~~--~~l~~~~~~~ 119 (484)
T 4dsg_A 57 --------GFTWDLG-GHVIFSHYQYFDDVMDWAV-QGWNVLQR--ESWVWV-RGRWVPYPFQN--NI--HRLPEQDRKR 119 (484)
T ss_dssp --------SCEEESS-CCCBCCSBHHHHHHHHHHC-SCEEEEEC--CCEEEE-TTEEEESSGGG--CG--GGSCHHHHHH
T ss_pred --------CcEEeeC-CcccccChHHHHHHHHHHh-hhhhhccC--ceEEEE-CCEEEEeCccc--hh--hhCCHHHHHH
Confidence 3446774 66664444 4556666653 33333222 123333 78888888321 11 1234433332
Q ss_pred -HHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHHhccCCchhhhhhhchhhHH---
Q 014883 178 -LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGI--- 251 (416)
Q Consensus 178 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~s~~~~~--- 251 (416)
+..++.. +.. .....+.++.+|+.+. +.+.+.+ ++. +.... |..++ .++|+.+.+
T Consensus 120 ~~~~ll~~-~~~-------------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v--~~~~~--~~ls~~~~~~r~ 180 (484)
T 4dsg_A 120 CLDELVRS-HAR-------------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKV--WAVPP--CLMSTEWVEERV 180 (484)
T ss_dssp HHHHHHHH-HHC-------------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHH--HSSCG--GGBCSSSCTTTS
T ss_pred HHHHHHHH-Hhc-------------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhh--cCCCH--HHhcHHHHhccc
Confidence 2233322 100 1123467899998753 1111111 111 11011 11121 234433211
Q ss_pred -----HH-HHHHHhhhcc--ccCCCccEEeec-CCcchHHHHHHHHHHhcCcEEEcC--CceeEEEEecCCCcEEEEEeC
Q 014883 252 -----NR-LALYNSSIGR--FQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGVRLA 320 (416)
Q Consensus 252 -----~~-~~~~~~s~~~--~g~~~~~~~~p~-gG~~~l~~al~r~~~~~Gg~i~l~--~~V~~I~~~~~~g~~~gV~l~ 320 (416)
.. +...+..... ++ ..+.+.||. ||+++|+++|++.+.. .+|+++ ++|++|..+ ++ +|++.
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v~~~ 252 (484)
T 4dsg_A 181 APVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TITFS 252 (484)
T ss_dssp CCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EEEET
T ss_pred cCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EEEEC
Confidence 11 1111111000 11 112367775 8999999999764422 289999 569999875 45 35568
Q ss_pred CCcEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCC-CCceEEEeCCCCCCCCCCC
Q 014883 321 SGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPEQVT 398 (416)
Q Consensus 321 ~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~-~~~~~~~~pp~~~~~~~~~ 398 (416)
+|+++.||+||++ |...+.++..+..+++++......+...+..+.+..+.++++..++ +...-+.+|... .+
T Consensus 253 ~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~-----~~ 327 (484)
T 4dsg_A 253 NGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDT-----SP 327 (484)
T ss_dssp TSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTT-----CS
T ss_pred CCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCC-----Ce
Confidence 8999999999964 4433333322212234554444455567888999999999885432 333444556332 12
Q ss_pred eEEEEEecC-CCccCCCC
Q 014883 399 SIRVLQLGG-NLAVCPLG 415 (416)
Q Consensus 399 ~v~~~~~~~-~~~~~p~G 415 (416)
..++..++. +...+|+|
T Consensus 328 ~~ri~~~s~~~p~~ap~g 345 (484)
T 4dsg_A 328 FYRATVFSNYSKYNVPEG 345 (484)
T ss_dssp CSEEECGGGTCGGGSCTT
T ss_pred EEEEEeecCCCcccCCCC
Confidence 334444333 24556665
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.86 E-value=3.8e-21 Score=194.19 Aligned_cols=283 Identities=12% Similarity=0.086 Sum_probs=166.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (416)
..+||||||||++||+||..|+++|++|+|||+++++||++.++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~-------------------------------- 79 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEE-------------------------------- 79 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETT--------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCC--------------------------------
Confidence 357999999999999999999999999999999999999998875311
Q ss_pred ccCCCCceEeeCCCCeEEeeC-chHHHHHHhcCccccccccccc-ceeeeccCCceeecCC---ChhhhhhcCCCChH--
Q 014883 101 LSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPD---SRAAIFKDKSLGLM-- 173 (416)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~-~~~~~~~~g~~~~~p~---~~~~~~~~~~l~~~-- 173 (416)
..+.+|+ |++++... ..+.+++.++|+... .+...+ ..++.. +|.....+. .. ..+.. .+.+.
T Consensus 80 -----~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~-~~~~~~~ 149 (498)
T 2iid_A 80 -----AGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYFI-KNIRKKVGEVKKDP-GLLKY-PVKPSEA 149 (498)
T ss_dssp -----TTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEEE-TTEEEEHHHHHHCG-GGGCC-CCCGGGT
T ss_pred -----CCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEEe-CCeeecccccccCc-ccccc-CCCcccc
Confidence 1344666 46666443 356677888887532 222111 112111 333221110 00 01110 11111
Q ss_pred -----HH--HHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcC-CChhHHHHHHHHHHhc-cCCchhhhhh
Q 014883 174 -----EK--NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMA-DYDQEVSEYV 244 (416)
Q Consensus 174 -----~k--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~ 244 (416)
+. ..+.++...+.... ......++.+.++.+|+.+.+ +++..+.++...+... .+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 214 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRTN--------CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYY------- 214 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHSC--------HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTT-------
T ss_pred CCCHHHHHHHHHHHHHHHHhhcc--------HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcccchh-------
Confidence 10 01111111111110 000112345688999999866 5655554433211000 000
Q ss_pred hchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc-
Q 014883 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ- 323 (416)
Q Consensus 245 ~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~- 323 (416)
.+....+... .... .+ ..+.+++||++.|+++|++.+ +.+|++|++|++|..+ ++. +.|++.+|+
T Consensus 215 ~~~~~~~~~~----~~~~-~~---~~~~~~~gG~~~l~~~l~~~l---~~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~ 280 (498)
T 2iid_A 215 VSFIESLKHD----DIFA-YE---KRFDEIVDGMDKLPTAMYRDI---QDKVHFNAQVIKIQQN--DQK-VTVVYETLSK 280 (498)
T ss_dssp SBHHHHHHHH----HHHT-TC---CCEEEETTCTTHHHHHHHHHT---GGGEESSCEEEEEEEC--SSC-EEEEEECSSS
T ss_pred HHHHHHHHHH----hccc-cC---cceEEeCCcHHHHHHHHHHhc---ccccccCCEEEEEEEC--CCe-EEEEEecCCc
Confidence 0111111111 1111 11 126789999999999997644 4489999999999986 444 467766665
Q ss_pred ---EEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCC
Q 014883 324 ---DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (416)
Q Consensus 324 ---~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~ 376 (416)
+++||+||++ |...+.++ .+.|+||+.+.+..++..++.+.|.++.|++||
T Consensus 281 ~~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 281 ETPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp CCCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred ccceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 5899999965 44433443 356788888777777778999999999999997
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.84 E-value=5e-20 Score=182.09 Aligned_cols=244 Identities=15% Similarity=0.160 Sum_probs=140.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
..+||||||||++||+||++|+++| ++|+|+|+++++||+++|++.+|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G------------------------------- 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG------------------------------- 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC-------------------------------
Confidence 4579999999999999999999999 99999999999999999986543
Q ss_pred cccCCCCceEeeCCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCC-hHHHHH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLG-LMEKNQ 177 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~-~~~k~~ 177 (416)
+.+|. |++++... ..+.+++.++|+... .......+.+ .+|+.. .|.. + ... +.....
T Consensus 54 --------~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~-~~g~~~-~~~~--~-----~~~~~~~~~~ 113 (424)
T 2b9w_A 54 --------RRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFLH-EDGEIY-VPEK--D-----PVRGPQVMAA 113 (424)
T ss_dssp --------EECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEEC-TTSCEE-CGGG--C-----TTHHHHHHHH
T ss_pred --------ccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeEc-CCCCEe-cccc--C-----cccchhHHHH
Confidence 33566 46665333 467778888886432 1111122222 355543 2210 0 000 001112
Q ss_pred HHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHHHHHHHH
Q 014883 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALY 257 (416)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (416)
+.++...+......... ........+.+..|+.+|+++.+.+. ..+.+...+....+. ++ .++|+...+ .|
T Consensus 114 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~----~~ 184 (424)
T 2b9w_A 114 VQKLGQLLATKYQGYDA-NGHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVL----KY 184 (424)
T ss_dssp HHHHHHHHHTTTTTTTS-SSSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHH----HH
T ss_pred HHHHHHHHhhhhhhccc-ccchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHH----Hh
Confidence 22332222211110000 00001112345689999999887764 444322111111222 21 234543322 22
Q ss_pred Hhhhc--cccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 258 NSSIG--RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 258 ~~s~~--~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
+...+ .+. .+..+++.+|+++++++|.+ .++.+|++|++|++|..+ +++ +.|++.+| +++||+||++
T Consensus 185 ~~~~~~~~~~--~~~~~~~~~g~~~l~~~l~~---~l~~~v~~~~~V~~i~~~--~~~-v~v~~~~g-~~~ad~Vv~a 253 (424)
T 2b9w_A 185 LDFVTMMSFA--KGDLWTWADGTQAMFEHLNA---TLEHPAERNVDITRITRE--DGK-VHIHTTDW-DRESDVLVLT 253 (424)
T ss_dssp SCHHHHHHHH--HTCCBCCTTCHHHHHHHHHH---HSSSCCBCSCCEEEEECC--TTC-EEEEESSC-EEEESEEEEC
T ss_pred hhHhhhhccc--CCceEEeCChHHHHHHHHHH---hhcceEEcCCEEEEEEEE--CCE-EEEEECCC-eEEcCEEEEC
Confidence 21110 011 01245789999999998854 567789999999999986 555 45887776 4999999954
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.84 E-value=3.7e-20 Score=186.56 Aligned_cols=303 Identities=14% Similarity=0.102 Sum_probs=159.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
+..+||+|||||++||+||+.|+++|++|+|||+++++||++++++..+ .+....+. .
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~--~~~~~~~~--------------------~ 66 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS--EETDLSGE--------------------T 66 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC--EEECTTSC--------------------E
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc--ccccccch--------------------h
Confidence 3467999999999999999999999999999999999999999876432 01100000 0
Q ss_pred cccCCCCceEeeCCCCeEEeeCchHHHHHHhcCcccccccccc-cceeee-ccC----CceeecCCChhhhhhcCCCChH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSI-DATFML-DAD----AKLCSVPDSRAAIFKDKSLGLM 173 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~g~~~~~~f~~~-~~~~~~-~~~----g~~~~~p~~~~~~~~~~~l~~~ 173 (416)
........+.+|. |+.+++....+.+++.++|+... .+... ...+++ ..+ |....++....+.
T Consensus 67 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------- 135 (489)
T 2jae_A 67 QKCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADT--------- 135 (489)
T ss_dssp EECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHH---------
T ss_pred hhhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhh---------
Confidence 0001113445777 47766555578888999888532 12211 122333 212 4433322110000
Q ss_pred HHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChh--------HHHHHHHHHHhccCCchhhhhhh
Q 014883 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK--------IKSIVLYAIAMADYDQEVSEYVL 245 (416)
Q Consensus 174 ~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 245 (416)
...+..++......... . +......+.++.+|+++++.... ...++............+.. .
T Consensus 136 -~~~~~~l~~~~~~~~~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 205 (489)
T 2jae_A 136 -FGYMSELLKKATDQGAL-D------QVLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKP--F 205 (489)
T ss_dssp -HHHHHHHHHHHHHHTTT-T------TTSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCC--C
T ss_pred -hccHHHHHHHHHhcccc-c------cccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCC--c
Confidence 00011111111100000 0 00001123467777775432100 00000000000000000000 0
Q ss_pred chhhHHH-HHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcC-cEEEcCCceeEEEEecCCCcEEEEEeCCC-
Q 014883 246 KTRDGIN-RLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASG- 322 (416)
Q Consensus 246 s~~~~~~-~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~l~~G- 322 (416)
....... .+..++........ ...+++++||++.|+++|++.+ + ++|++|++|++|..+ +++ +.|++.+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l---~~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~ 278 (489)
T 2jae_A 206 AMQEVIRSGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDRI---GTDNIVFGAEVTSMKNV--SEG-VTVEYTAGG 278 (489)
T ss_dssp CHHHHHHHTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHHH---CGGGEETTCEEEEEEEE--TTE-EEEEEEETT
T ss_pred CHHHHhhhhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHhc---CCCeEEECCEEEEEEEc--CCe-EEEEEecCC
Confidence 0000000 01111111101111 1237789999999999997643 5 889999999999987 554 45776666
Q ss_pred --cEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCC
Q 014883 323 --QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (416)
Q Consensus 323 --~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~ 376 (416)
++++||+||++ |...+..+.. +||+.+....++..++.+.|..+.|++||
T Consensus 279 ~~~~~~ad~vI~a~p~~~l~~l~~----~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 279 SKKSITADYAICTIPPHLVGRLQN----NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp EEEEEEESEEEECSCHHHHTTSEE----CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred eEEEEECCEEEECCCHHHHHhCcc----CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 67999999965 4444455421 45555555555667889999999999986
No 24
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.76 E-value=1.5e-17 Score=174.86 Aligned_cols=276 Identities=12% Similarity=0.091 Sum_probs=157.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (416)
+..+||||||||++||+||..|+++|++|+|||+++++||+++|.+..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~-------------------------------- 381 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSF-------------------------------- 381 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCS--------------------------------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeecccc--------------------------------
Confidence 346899999999999999999999999999999999999999987531
Q ss_pred cccCCCCceEeeCCCCeEEee--CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhcCCCChHHHHH
Q 014883 100 LLSQHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (416)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~--~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (416)
.++.+|+ |.+++.. ...+..++.++|+..... ..... ++..+|.... . ... ......
T Consensus 382 ------~G~~vd~-Ga~~i~G~~~np~~~l~~~lGl~~~~~-~~~~~--l~~~~g~~~~--~---~~~------~~~~~~ 440 (776)
T 4gut_A 382 ------KGVTVGR-GAQIVNGCINNPVALMCEQLGISMHKF-GERCD--LIQEGGRITD--P---TID------KRMDFH 440 (776)
T ss_dssp ------TTCCEES-SCCEEECCTTCHHHHHHHHHTCCCEEC-CSCCC--EECTTSCBCC--H---HHH------HHHHHH
T ss_pred ------CCeEecc-CCeEEeCCccChHHHHHHHhCCccccc-ccccc--eEccCCcccc--h---hHH------HHHHHH
Confidence 1233666 3666632 346667777777643211 11111 1111332210 0 000 000111
Q ss_pred HHHHHHHHHhhcCCCccccccccccccccCCc--------HHHHHHhcCCChhHH--HHHHH---HHHhccCCchhhhhh
Q 014883 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSP--------FAEFLTKMKLPHKIK--SIVLY---AIAMADYDQEVSEYV 244 (416)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t--------~~~~l~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~ 244 (416)
+.+++..+..+.... ....+.+ +.+|+++.+..-... ..+.+ .+... ..... ..
T Consensus 441 ~~~ll~~~~~~~~~~----------~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~-~G~~l--~~ 507 (776)
T 4gut_A 441 FNALLDVVSEWRKDK----------TQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYA-CGSNL--HQ 507 (776)
T ss_dssp HHHHHHHHHHHGGGC----------CGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHH-HTSCT--TS
T ss_pred HHHHHHHHHHHhhcc----------cccccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHh-cCCCh--HH
Confidence 222233222221100 0112233 334444444321110 11100 00000 00000 01
Q ss_pred hchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcE
Q 014883 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (416)
Q Consensus 245 ~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~ 324 (416)
++... ......+....+....+.+|++.+.++|++ |.+|++|++|++|..+ ++. +.|++.+|++
T Consensus 508 ls~~~--------~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~ 571 (776)
T 4gut_A 508 VSARS--------WDHNEFFAQFAGDHTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTG 571 (776)
T ss_dssp BBTTT--------TTGGGGSCCCCSCEEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCE
T ss_pred cChhh--------hhhhhhHHhcCCCeEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcE
Confidence 11100 000001111113356789999999998753 6789999999999986 444 5688889999
Q ss_pred EEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCC
Q 014883 325 ILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (416)
Q Consensus 325 i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~ 377 (416)
+.||+||++ |...+....+.+.|+||+.+....++..++.+.|.++.|++||=
T Consensus 572 i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW 625 (776)
T 4gut_A 572 YSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW 625 (776)
T ss_dssp EEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccc
Confidence 999999954 54443333345788999888777777788999999999999974
No 25
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.76 E-value=2.2e-17 Score=159.25 Aligned_cols=240 Identities=11% Similarity=0.070 Sum_probs=133.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC-CCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~-~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (416)
+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.++.... +... .|
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~------~~~~--------~~---------- 97 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK------GEPS--------PF---------- 97 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT------TSCC--------SS----------
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc------cccc--------cc----------
Confidence 34679999999999999999999999999999999 99999999886421 0000 00
Q ss_pred ccccCCCCceEeeCCCCeEEee-CchHHHHHHhcCcccccccccc-----------------------------------
Q 014883 99 RLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSI----------------------------------- 142 (416)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~----------------------------------- 142 (416)
....+.+++ |++++.. ...+.+++.++|+..+..+..-
T Consensus 98 -----~~~~~~~e~-G~~~~~~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q 171 (376)
T 2e1m_A 98 -----ADPAQYAEA-GAMRLPSFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEF 171 (376)
T ss_dssp -----SSTTCCEES-SCCCEETTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTC
T ss_pred -----cCCCcEEec-CceeecchHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccc
Confidence 012344677 4766643 3356778888888766533221
Q ss_pred ------cceeeeccCCceeecC---CChhhhhh-cCCCChH-------H--HHHHHHHHHHHHhhcCC-------Cc-cc
Q 014883 143 ------DATFMLDADAKLCSVP---DSRAAIFK-DKSLGLM-------E--KNQLMRFFKLVQGHLSL-------DE-SE 195 (416)
Q Consensus 143 ------~~~~~~~~~g~~~~~p---~~~~~~~~-~~~l~~~-------~--k~~l~~~~~~~~~~~~~-------~~-~~ 195 (416)
...+++. +|+..... ... ..+. ...+.+. + .+.+.+|+..+...... .+ +.
T Consensus 172 ~~r~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (376)
T 2e1m_A 172 KEPDKRNHTWIRT-NREQVRRAQYATDP-SSINEGFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWL 249 (376)
T ss_dssp BCCCCCCCSEEEE-TTEEEEHHHHHHCT-HHHHHHTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHH
T ss_pred cccccCCCceEEE-CCceecccccccCH-HHhccccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhh
Confidence 0111111 33222110 000 0110 0001111 1 11222333322110000 00 00
Q ss_pred cccccccccccCCcHHHHHH-hcCCChhHHHHHHHHHHhccCCchhhhhhhchhhHHHHHHHHHhhhccccCCCccEEee
Q 014883 196 ENNVRISEEDLDSPFAEFLT-KMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYP 274 (416)
Q Consensus 196 ~~~~~~~~~~~~~t~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p 274 (416)
........+++..|+.+||+ +.+.++..++++... .++... ..+|.... +. +. + .+.. ...++.+
T Consensus 250 ~~~~~~~~~lD~~S~~~~L~~~~g~s~~~~~~~~~~---~~~~~~---~~~s~l~~---l~-~~-~--~~~~-~~~~~~i 315 (376)
T 2e1m_A 250 AGWADVVRDFDGYSMGRFLREYAEFSDEAVEAIGTI---ENMTSR---LHLAFFHS---FL-GR-S--DIDP-RATYWEI 315 (376)
T ss_dssp HHHHHHHHHHTTCBHHHHHHHTSCCCHHHHHHHHHH---TTCTTT---TTSBHHHH---HH-HC-S--CSCT-TCCEEEE
T ss_pred ccchHHHHHHhCCCHHHHHhhccCCCHHHHHHHHhh---cCcccc---chhhHHHH---HH-Hh-h--hhcc-CCceEEE
Confidence 01111223567899999999 789998888765322 122211 02333221 11 11 1 1111 1337889
Q ss_pred cCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEe
Q 014883 275 IYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (416)
Q Consensus 275 ~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (416)
.||++.|+++|++ .++.+|++|++|++|..+
T Consensus 316 ~GG~~~l~~~l~~---~l~~~i~l~~~V~~I~~~ 346 (376)
T 2e1m_A 316 EGGSRMLPETLAK---DLRDQIVMGQRMVRLEYY 346 (376)
T ss_dssp TTCTTHHHHHHHH---HGGGTEECSEEEEEEEEC
T ss_pred CCcHHHHHHHHHH---hcCCcEEecCeEEEEEEC
Confidence 9999999998875 457899999999999986
No 26
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.73 E-value=2.1e-16 Score=164.62 Aligned_cols=102 Identities=11% Similarity=-0.029 Sum_probs=79.7
Q ss_pred cEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCC-
Q 014883 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGS- 341 (416)
Q Consensus 270 ~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~------G~~i~Ad~VI~~-p~~~~~~l- 341 (416)
.+..++||++.|+++|++ +.+|++|++|++|..+ ++. +.|++.+ |++++||+||++ |...+.++
T Consensus 392 ~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 367899999999998864 5589999999999987 333 4666555 568999999965 54444442
Q ss_pred -CCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCC
Q 014883 342 -LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (416)
Q Consensus 342 -~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~ 379 (416)
.+.+.|+||+.+.+..++..++.+.|.++.|++||-++
T Consensus 464 ~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~ 502 (662)
T 2z3y_A 464 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 502 (662)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred CceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccC
Confidence 13578999998777777788999999999999998543
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.72 E-value=1.7e-18 Score=169.70 Aligned_cols=231 Identities=13% Similarity=0.150 Sum_probs=130.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (416)
+.++||||||||++||+||..|+++ |++|+|+|+++++||++++.....
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------ 54 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------ 54 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT------------------------------
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC------------------------------
Confidence 3468999999999999999999999 999999999999999999976420
Q ss_pred ccccCCCCceEee-CCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhh---hhhcCCCChH
Q 014883 99 RLLSQHPRNFNLD-VSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAA---IFKDKSLGLM 173 (416)
Q Consensus 99 ~~~~~~~~~~~~d-l~Gp~~~~~-~~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~---~~~~~~l~~~ 173 (416)
.++.+| . |++++.. ...+.+++.++++. ..+.. ..+++ .+|+.+++|.+... ++.. .+.+.
T Consensus 55 -------~g~~~~~~-G~~~~~~~~~~~~~~~~~~g~~--~~~~~--~~~~~-~~G~~~~~p~~~~~~~~l~~~-~~~~~ 120 (399)
T 1v0j_A 55 -------TGIEVHKY-GAHLFHTSNKRVWDYVRQFTDF--TDYRH--RVFAM-HNGQAYQFPMGLGLVSQFFGK-YFTPE 120 (399)
T ss_dssp -------TCCEEETT-SCCCEEESCHHHHHHHTTTCCB--CCCCC--CEEEE-ETTEEEEESSSHHHHHHHHTS-CCCHH
T ss_pred -------CCEEEEeC-CCcEEcCCcHHHHHHHHHhhhh--hcccc--ceEEE-ECCEEEeCCCCHHHHHHHhcc-cCCHH
Confidence 123354 4 5776654 34678888888762 22221 22333 37888888876422 2221 11222
Q ss_pred HHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHH-HHHHhccCCchhhhhhhchhhHHH
Q 014883 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGIN 252 (416)
Q Consensus 174 ~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 252 (416)
+. .+++...... .....+.++.+|+.+..-.+....++. +.... +..++ .++|+... .
T Consensus 121 ~~---~~~l~~~~~~-------------~~~~~~~s~~e~l~~~~g~~~~~~~~~~~~~~~--~~~~~--~~ls~~~~-~ 179 (399)
T 1v0j_A 121 QA---RQLIAEQAAE-------------IDTADAQNLEEKAISLIGRPLYEAFVKGYTAKQ--WQTDP--KELPAANI-T 179 (399)
T ss_dssp HH---HHHHHHHGGG-------------SCTTC----CCHHHHHHCHHHHHHHTHHHHHHH--HTSCG--GGSCGGGC-S
T ss_pred HH---HHHHHHHhhc-------------cCCCCcccHHHHHHHHHhHHHHHHHHHHHHHhh--cCCCh--hhcChHhh-h
Confidence 22 2222211110 011234678888876322222333332 11122 22222 24554331 0
Q ss_pred HHHHHHhhhccccCCCccE-EeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEE-EcCEE
Q 014883 253 RLALYNSSIGRFQNALGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKL 330 (416)
Q Consensus 253 ~~~~~~~s~~~~g~~~~~~-~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i-~Ad~V 330 (416)
++.........+. ...+ .+|+||+++|+++|++ .+|++|++|++|++|.. + | . ++ .||+|
T Consensus 180 ~~~~~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~-----v--~---~~~~aD~V 241 (399)
T 1v0j_A 180 RLPVRYTFDNRYF--SDTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q-----L--R---PGSPAAPV 241 (399)
T ss_dssp CCCCCSSSCCCSC--CCSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H-----H--T---TTSTTCCE
T ss_pred cceeEeccccchh--hhhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h-----h--h---hcccCCEE
Confidence 0000000000111 0124 3999999999998864 57899999999999853 1 2 1 35 69999
Q ss_pred EEC
Q 014883 331 VLD 333 (416)
Q Consensus 331 I~~ 333 (416)
|++
T Consensus 242 I~t 244 (399)
T 1v0j_A 242 VYT 244 (399)
T ss_dssp EEC
T ss_pred EEC
Confidence 965
No 28
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.72 E-value=1.2e-17 Score=172.23 Aligned_cols=105 Identities=9% Similarity=-0.029 Sum_probs=75.7
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEcCCcee--EEEEecCCC-----cEEEE-EeCCCc--EEEcCEEEEC-CCCCC-
Q 014883 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVLD-PSFTV- 338 (416)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~--~I~~~~~~g-----~~~gV-~l~~G~--~i~Ad~VI~~-p~~~~- 338 (416)
+.++.||+++|+++|++.+.. |+.|+|+++|+ +|.++. ++ ..+.| ...+|+ +++||+||++ |...+
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 678999999999999876432 78899999999 999863 33 13566 446677 7999999974 43322
Q ss_pred -----CCCC-------C---------C----chhhh-h-------hhhhhccccCCcceEEEEEEEe-----cCCCC
Q 014883 339 -----PGSL-------A---------S----SHQQL-Q-------ESFQAFSLSDNKGKVARGICIT-----RSSLK 377 (416)
Q Consensus 339 -----~~l~-------~---------~----~~~~l-~-------~~~~~~~~~~~~~~~~k~i~i~-----~~p~~ 377 (416)
.++. . + ++|.| | ..+....++..++..+|..+.| ++||=
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW 493 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWV 493 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTS
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcc
Confidence 1221 0 0 22335 6 6777777888999999999999 88974
No 29
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.72 E-value=3.8e-16 Score=165.26 Aligned_cols=103 Identities=12% Similarity=-0.008 Sum_probs=79.7
Q ss_pred ccEEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCC
Q 014883 269 GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGS 341 (416)
Q Consensus 269 ~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~------G~~i~Ad~VI~~-p~~~~~~l 341 (416)
+.++.++||++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||++ |...+.++
T Consensus 562 g~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCS
T ss_pred CceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhh
Confidence 3467899999999998865 3479999999999987 443 4566544 568999999976 54444442
Q ss_pred --CCCchhhhhhhhhhccccCCcceEEEEEEEecCCCCCC
Q 014883 342 --LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (416)
Q Consensus 342 --~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~~~ 379 (416)
.+.+.|+||..+....++..++.+.|.++.|++||-+.
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~ 673 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP 673 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT
T ss_pred hcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC
Confidence 13578999998777777778999999999999998554
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.70 E-value=1.3e-17 Score=161.69 Aligned_cols=223 Identities=13% Similarity=0.175 Sum_probs=129.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCccccccccccccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (416)
++||+|||||++||+||.+|+++|++|+|+|+++++||++.++..+|
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g--------------------------------- 47 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG--------------------------------- 47 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT---------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC---------------------------------
Confidence 37999999999999999999999999999999999999999976432
Q ss_pred cCCCCceEeeCCCCeEEeeCc-hHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhc-CCCChHHHHHHH
Q 014883 102 SQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD-KSLGLMEKNQLM 179 (416)
Q Consensus 102 ~~~~~~~~~dl~Gp~~~~~~~-~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~-~~l~~~~k~~l~ 179 (416)
+.+|..|++++.... .+.+++.+++. ...+... .+.+ .+|+.+++|.+...+... ....+. .+.
T Consensus 48 ------~~~~~~G~~~~~~~~~~~~~~~~~l~~--~~~~~~~--~~~~-~~g~~~~~p~~~~~~~~l~~~~~~~---~~~ 113 (367)
T 1i8t_A 48 ------IQIHKYGAHIFHTNDKYIWDYVNDLVE--FNRFTNS--PLAI-YKDKLFNLPFNMNTFHQMWGVKDPQ---EAQ 113 (367)
T ss_dssp ------EEEETTSCCCEEESCHHHHHHHHTTSC--BCCCCCC--CEEE-ETTEEEESSBSHHHHHHHHCCCCHH---HHH
T ss_pred ------ceeeccCCceecCCCHHHHHHHHHhhh--hhhcccc--ceEE-ECCeEEEcCCCHHHHHHHhccCCHH---HHH
Confidence 335422577765443 56667766653 2222221 1222 278888888764322211 011122 223
Q ss_pred HHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHHhccCCchhhhhhhchhhHHHHHHHH
Q 014883 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRLALY 257 (416)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (416)
+++...... .....+.++.+|+.+. ..+.+.+ ++. +.... +..++ .++|+... .++.
T Consensus 114 ~~l~~~~~~-------------~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~--~~~~~--~~lsa~~~-~~l~-- 172 (367)
T 1i8t_A 114 NIINAQKKK-------------YGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQ--WGRSA--KELPAFII-KRIP-- 172 (367)
T ss_dssp HHHHHHTTT-------------TCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHH--HSSCG--GGSCTTSS-CCCC--
T ss_pred HHHHHHhhc-------------cCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhh--hCCCh--HHcCHHHH-hhce--
Confidence 333332211 0112457899999865 3333333 222 11122 22232 24554321 0000
Q ss_pred Hhh-h-ccccCCCccE-EeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 258 NSS-I-GRFQNALGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 258 ~~s-~-~~~g~~~~~~-~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
... . ..+. .+.+ .+|+||+++|+++|++ |++|++|++|++|.. + | ++.||+||++
T Consensus 173 ~~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~~-----~---v------~~~~D~VV~a 230 (367)
T 1i8t_A 173 VRFTFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDKD-----S---L------ASKAHRIIYT 230 (367)
T ss_dssp BCSSSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSHH-----H---H------HTTEEEEEEC
T ss_pred eeeccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeech-----h---h------hccCCEEEEe
Confidence 000 0 0111 1234 3999999999998865 689999999998841 1 2 2458999954
No 31
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.67 E-value=6.3e-17 Score=157.71 Aligned_cols=215 Identities=13% Similarity=0.143 Sum_probs=125.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhhhHhhhhcCCCCCCCCCCCcccccccccccccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (416)
+++||+|||||++||++|..|+++|++|+|+|+++++||++.+.+...
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~-------------------------------- 49 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE-------------------------------- 49 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT--------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC--------------------------------
Confidence 357999999999999999999999999999999999999999876521
Q ss_pred ccCCCCceEe-eCCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhhc--CCCChHHHH
Q 014883 101 LSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD--KSLGLMEKN 176 (416)
Q Consensus 101 ~~~~~~~~~~-dl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~--~~l~~~~k~ 176 (416)
.++.+ |. |++++... ..+.+++.+++.. ..+.. ..+++. +|+.+++|.+...+... ..+++.+
T Consensus 50 -----~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~--~~~~~--~~~~~~-~g~~~~~P~~~~~~~~l~~~~~~~~~-- 116 (384)
T 2bi7_A 50 -----TNVMVHVY-GPHIFHTDNETVWNYVNKHAEM--MPYVN--RVKATV-NGQVFSLPINLHTINQFFSKTCSPDE-- 116 (384)
T ss_dssp -----TCCEEETT-SCCCEEESCHHHHHHHHTTSCE--EECCC--CEEEEE-TTEEEEESCCHHHHHHHTTCCCCHHH--
T ss_pred -----CCceEeeC-CceEECCCCHHHHHHHHHHhhh--ccccc--ceEEEE-CCEEEECCCChhHHHHHhcccCCHHH--
Confidence 12233 45 57776543 4677888877642 12211 122332 78888888764322111 1122322
Q ss_pred HHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHHhccCCchhhhhhhchhhHHHHH
Q 014883 177 QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRL 254 (416)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~ 254 (416)
+.+++.... .. . ...+.++.+|+.+. ..+.+.+ ++. +.... +..++ .++|+... .++
T Consensus 117 -~~~~l~~~~---~~----------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~--~~~~~--~~ls~~~~-~r~ 175 (384)
T 2bi7_A 117 -ARALIAEKG---DS----------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQ--WGMQP--SELPASIL-KRL 175 (384)
T ss_dssp -HHHHHHHHS---CC----------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHH--HSSCG--GGSBGGGC-CSC
T ss_pred -HHHHHHHhh---hc----------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHH--hCCCH--HHhCHHHH-hcc
Confidence 222332211 10 0 13467999999865 3344443 322 12122 22222 24554321 000
Q ss_pred HHHHhhhccccCCCccEE-eecCCcchHHHHHHHHHHhcCcEEEcCCcee-EEE
Q 014883 255 ALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SLL 306 (416)
Q Consensus 255 ~~~~~s~~~~g~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~-~I~ 306 (416)
.........+. .+.+. +|+||+++|+++|++ ..|++|++|++|+ +|.
T Consensus 176 ~~~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i~ 224 (384)
T 2bi7_A 176 PVRFNYDDNYF--NHKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEER 224 (384)
T ss_dssp CCCSSSCCCSC--CCSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGGG
T ss_pred ccccccccccc--cccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhhh
Confidence 00000000111 12343 999999999998864 5789999999999 773
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.67 E-value=1.2e-16 Score=155.39 Aligned_cols=211 Identities=15% Similarity=0.211 Sum_probs=124.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccC-hhhhHhhhhcCCCCCCCCCCCccccccccccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (416)
+...+||+|||||++||+||..|+++|++|+|+|+++++||++.+.. ..|
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----------------------------- 76 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----------------------------- 76 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS-----------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC-----------------------------
Confidence 34579999999999999999999999999999999999999999865 222
Q ss_pred cccccCCCCceEe-eCCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhh--cCCCChH
Q 014883 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFK--DKSLGLM 173 (416)
Q Consensus 98 ~~~~~~~~~~~~~-dl~Gp~~~~~~-~~~~~~l~~~g~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~--~~~l~~~ 173 (416)
+.+ |. |++++... ..+.+++.+++.. ..+. ...+++. +|+++++|.+...+.. ...+++.
T Consensus 77 ----------~~~~~~-G~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~~ 140 (397)
T 3hdq_A 77 ----------VLIHPY-GPHIFHTNSKDVFEYLSRFTEW--RPYQ--HRVLASV-DGQLLPIPINLDTVNRLYGLNLTSF 140 (397)
T ss_dssp ----------CEECTT-SCCCCEESCHHHHHHHHTSCCE--EECC--CBEEEEE-TTEEEEESCCHHHHHHHHTCCCCHH
T ss_pred ----------ceEeec-CCcccCCChHHHHHHHHHhhhc--cccc--ccceEEE-CCEEEEcCCChHHHHHhhccCCCHH
Confidence 222 44 47766543 4677788777632 1121 1223333 8899999987533211 1122332
Q ss_pred HHHHHHHHHHHHHhhcCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHH-HHHHhccCCchhhhhhhchhhHHH
Q 014883 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGIN 252 (416)
Q Consensus 174 ~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 252 (416)
.. ..++.. .. .....+.++.+|+.+..-.+....++. +.... |..++ +++|+.+. .
T Consensus 141 ~~---~~~l~~-~~--------------~~~~~~~s~~e~~~~~~G~~~~e~~~~py~~k~--~~~~~--~~Lsa~~~-~ 197 (397)
T 3hdq_A 141 QV---EEFFAS-VA--------------EKVEQVRTSEDVVVSKVGRDLYNKFFRGYTRKQ--WGLDP--SELDASVT-A 197 (397)
T ss_dssp HH---HHHHHH-HC--------------CCCSSCCBHHHHHHHHHHHHHHHHHTHHHHHHH--HSSCG--GGSBTTTG-G
T ss_pred HH---HHHHhh-cc--------------cCCCCCcCHHHHHHHhcCHHHHHHHHHHHhCch--hCCCH--HHHHHHHH-H
Confidence 22 222221 00 112346799999875321222222322 11122 23333 35665431 1
Q ss_pred HHHHHHhhhccccCC--CccE-EeecCCcchHHHHHHHHHHhcCcEEEcCCceeE
Q 014883 253 RLALYNSSIGRFQNA--LGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVIS 304 (416)
Q Consensus 253 ~~~~~~~s~~~~g~~--~~~~-~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~ 304 (416)
++. ....+... ...+ .+|+||.++|.++|+ +..|++|+||++|++
T Consensus 198 Rvp----~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~ 245 (397)
T 3hdq_A 198 RVP----TRTNRDNRYFADTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYRE 245 (397)
T ss_dssp GSC----CCSSCCCBSCCCSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGG
T ss_pred hcC----cccccCccchhhhheeccCCCHHHHHHHHH---hccCCEEEECCeEEe
Confidence 110 00011100 1224 489999999999774 467999999999983
No 33
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.64 E-value=7e-15 Score=140.93 Aligned_cols=100 Identities=10% Similarity=-0.011 Sum_probs=78.2
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCCCchhhh
Q 014883 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (416)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l 349 (416)
.+.+.+|++.+.++|++. +|++|+++++|++|..+ ++. +.|++.+|+++.||.||+. |.....+|+....|+|
T Consensus 104 ~~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EEECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred ceecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 346789999999988764 49999999999999986 444 5688888888999999954 5444456554456677
Q ss_pred hhhhhhccccCCcceEEEEEEEecCCC
Q 014883 350 QESFQAFSLSDNKGKVARGICITRSSL 376 (416)
Q Consensus 350 ~~~~~~~~~~~~~~~~~k~i~i~~~p~ 376 (416)
|+......++.++..+.++.+.|++|+
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~ 204 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGT 204 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCC
Confidence 776666667788999999999999874
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.37 E-value=3e-12 Score=123.19 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=47.1
Q ss_pred EeecCC---cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCC--cEEEcCEEEEC
Q 014883 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVLD 333 (416)
Q Consensus 272 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G--~~i~Ad~VI~~ 333 (416)
+.+..| ...+.++|.+.+++.|++|+++++|++|..+ ++..+.|++.+| .+++||.||+.
T Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 140 VSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred ECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEEC
Confidence 344444 3578899999999999999999999999986 443356887777 48999999943
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.36 E-value=1.5e-11 Score=121.74 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=51.2
Q ss_pred EEeecC-C---cchHHHHHHHHHHhcCcEEEcCC---ceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~g-G---~~~l~~al~r~~~~~Gg~i~l~~---~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
++.+.+ | ...+.++|.+.+++.|++|++++ +|++|..+ ++++++|++.+|++++||+||+.
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~A 216 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFLC 216 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEEC
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEEC
Confidence 445555 4 35788999999999999999999 99999987 77777899988889999999943
No 36
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.33 E-value=2.7e-11 Score=115.28 Aligned_cols=94 Identities=10% Similarity=0.036 Sum_probs=63.9
Q ss_pred EeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEE-cCEEEE-CCCCCCCCCCCCchhhh
Q 014883 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDIL-SHKLVL-DPSFTVPGSLASSHQQL 349 (416)
Q Consensus 272 ~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~-Ad~VI~-~p~~~~~~l~~~~~~~l 349 (416)
+....|+..+.+++++ |.+|+++++|++|..+ ++. +.|++.+|+.+. ||.||+ .|.....++. ...|++
T Consensus 103 ~~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~--~~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~-~~~~~l 173 (336)
T 1yvv_A 103 WVGKPGMSAITRAMRG-----DMPVSFSCRITEVFRG--EEH-WNLLDAEGQNHGPFSHVIIATPAPQASTLL-AAAPKL 173 (336)
T ss_dssp EEESSCTHHHHHHHHT-----TCCEECSCCEEEEEEC--SSC-EEEEETTSCEEEEESEEEECSCHHHHGGGG-TTCHHH
T ss_pred EEcCccHHHHHHHHHc-----cCcEEecCEEEEEEEe--CCE-EEEEeCCCcCccccCEEEEcCCHHHHHHhh-ccCHHH
Confidence 3456788888887754 7899999999999986 333 568888888764 999994 4543323322 223444
Q ss_pred hhhhhhccccCCcceEEEEEEEecCCCCC
Q 014883 350 QESFQAFSLSDNKGKVARGICITRSSLKP 378 (416)
Q Consensus 350 ~~~~~~~~~~~~~~~~~k~i~i~~~p~~~ 378 (416)
+. ......+..+.++.+.|++|+..
T Consensus 174 ~~----~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
T 1yvv_A 174 AS----VVAGVKMDPTWAVALAFETPLQT 198 (336)
T ss_dssp HH----HHTTCCEEEEEEEEEEESSCCSC
T ss_pred HH----HHhhcCccceeEEEEEecCCCCC
Confidence 32 22345677888888899998653
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.27 E-value=4.2e-11 Score=125.09 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=49.3
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
..++.+|. ..+.++|.+.+++.|++|+++++|++|..+ +++ ++|++.+|++++||.||+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVl 467 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVL 467 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEE
Confidence 44565553 578899999999999999999999999987 555 588888888999999994
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.26 E-value=5.9e-11 Score=114.79 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=48.1
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
++++.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++. ++|++.+| +++||+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~A 204 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVNA 204 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEEC
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEEC
Confidence 44555552 578899999999999999999999999987 554 78887666 8999999954
No 39
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.20 E-value=8e-12 Score=114.12 Aligned_cols=47 Identities=26% Similarity=0.322 Sum_probs=43.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccChhh
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIAD 68 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~ 68 (416)
++||+|||||++||+||+.|+++|++|+||||++++||++.+....+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~ 48 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA 48 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCC
Confidence 48999999999999999999999999999999999999998866543
No 40
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.19 E-value=6.7e-10 Score=112.07 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
.++||||||+|++||+||+.|+++|++|+||||.+.+||.+.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998753
No 41
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.18 E-value=1.4e-10 Score=113.79 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=48.3
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
..++......+.+.|.+.+++.|++|+++++|++|..+ ++. +.|++.+| +++||.||+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEE
Confidence 34666667789999999999999999999999999886 443 67887777 899999994
No 42
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.18 E-value=2.8e-10 Score=111.10 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=49.7
Q ss_pred EEeecCCcc---hHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~~---~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.+++.+|.- .+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+| +++||.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a 225 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALA 225 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEEC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEEC
Confidence 456666654 78889999899999999999999999986 677788988777 7999999943
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.17 E-value=1.4e-10 Score=115.01 Aligned_cols=59 Identities=20% Similarity=0.345 Sum_probs=49.8
Q ss_pred EeecCC-cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 272 IYPIYG-QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 272 ~~p~gG-~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
.+|..+ ...+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+|++++||.||+
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 456443 5688899999898999999999999999987 6777889988888899999994
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.17 E-value=3.3e-10 Score=118.49 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=48.0
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc-EEEcCEEEE
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~-~i~Ad~VI~ 332 (416)
.+++.+|. ..+.++|.+.+++.|++|+++++|++|+.+ +++ +.|++.+|+ +++||+||+
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVl 463 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVIL 463 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEE
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEE
Confidence 45566664 678899999999999999999999999987 444 578888887 899999994
No 45
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.16 E-value=7.4e-10 Score=107.26 Aligned_cols=60 Identities=25% Similarity=0.244 Sum_probs=47.9
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.+.+..|. ..+.++|.+.+++.|++|+.+++|++|..+ ++++++|++.+| +++||.||..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~A 200 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVNA 200 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEEC
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEEC
Confidence 33444442 578888989899999999999999999986 667767887776 8999999953
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.11 E-value=2.8e-09 Score=108.89 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=47.6
Q ss_pred EeecCC---cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 014883 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (416)
Q Consensus 272 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~Ad~VI~ 332 (416)
.++.+| ...+.+.|.+.+++.|++|+++++|++|+.+ + +++++|++. +|+ +++||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 345554 3578899999999999999999999999987 5 888888765 675 689999984
No 47
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.11 E-value=5e-09 Score=107.18 Aligned_cols=53 Identities=17% Similarity=0.243 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeC--CCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~--~G~--~i~Ad~VI~ 332 (416)
..+.+.|.+.+++.|++|+++++|++|..+ ++|++++|++. +|+ +++||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 578899999999999999999999999986 13888887765 575 689999994
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.10 E-value=6.8e-10 Score=112.22 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=45.8
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+|+++.||.||+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 456777878888899999999999999986 67788899999999999999943
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.07 E-value=2.3e-09 Score=114.48 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=49.2
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
++.+..|. ..+.++|.+.+++.|++|+.+++|++|..+ ++++++|++.+| +++||+||+.
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~A 202 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVSC 202 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEEC
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEEC
Confidence 44555553 378899999999999999999999999987 677778887666 8999999943
No 50
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.02 E-value=2e-09 Score=106.76 Aligned_cols=52 Identities=19% Similarity=0.324 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEE---------------ecCCCcEEEEEeCCCcEE--EcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLT---------------DQNSGSYKGVRLASGQDI--LSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~---------------~~~~g~~~gV~l~~G~~i--~Ad~VI~~ 333 (416)
..+.++|.+.+++.|++|+.+++|++|.. + ++++++|++.+| ++ +||.||+.
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~--~~~v~~V~t~~g-~i~~~Ad~VV~A 249 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ--EARASAAVLSDG-TRVEVGEKLVVA 249 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS--CEEEEEEEETTS-CEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC--CCceEEEEeCCC-EEeecCCEEEEC
Confidence 47889999999999999999999999987 4 566678887777 68 99999943
No 51
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.95 E-value=3.5e-08 Score=100.87 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~Ad~VI~ 332 (416)
..+.+.|.+.+++.|++|+++++|++|+.+ + |++++|++. +|+ +++||.||+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 478899999999999999999999999886 5 888888765 565 689999994
No 52
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.94 E-value=4.3e-10 Score=109.01 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
|++|||||||||++||+||+.|+++|++|+|+|+++.+|...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~ 43 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC
Confidence 668999999999999999999999999999999999887643
No 53
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.81 E-value=2.4e-09 Score=101.60 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=39.2
Q ss_pred cccEEEECCChhHHHHHHHHhh--CCCeEEEEccCCCCCCccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~--~G~~V~vlE~~~~~GG~~~s~ 64 (416)
++||+|||||++||+||++|++ .|++|+|+|+++++||.+...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~ 109 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG 109 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeC
Confidence 5799999999999999999975 599999999999999988653
No 54
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.75 E-value=5.4e-09 Score=98.02 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=35.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.|++|||||||||++||+||.+|+++|++|+|+|++ .+||..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~ 44 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRV 44 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCee
Confidence 477899999999999999999999999999999997 456643
No 55
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.74 E-value=5.6e-09 Score=98.96 Aligned_cols=59 Identities=8% Similarity=0.070 Sum_probs=40.1
Q ss_pred CCCcCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEcc----CCCCCCccccc
Q 014883 6 SESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSSL 64 (416)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~----~~~~GG~~~s~ 64 (416)
...+++.|+-++.+..++||+|||||++||+||..|+++|++|+|+|+ +..+||.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 6 HHHHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp ---------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred cccccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 334455555445555679999999999999999999999999999999 45899987653
No 56
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.71 E-value=9.5e-09 Score=96.61 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=37.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+|||||||||.+||+||.+|++.|++|+|+|++ .+||.|..
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 699999999999999999999999999999984 78887754
No 57
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.67 E-value=1.4e-08 Score=95.41 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=33.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.+.|||||||||.+||+||..|++.|++|+|+|++.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 446999999999999999999999999999999975
No 58
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.64 E-value=1.8e-08 Score=97.83 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
|.++||||||||++||++|+.|+++|++|+|+|+++.+|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 457999999999999999999999999999999999887643
No 59
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.63 E-value=1.4e-08 Score=101.91 Aligned_cols=49 Identities=31% Similarity=0.414 Sum_probs=39.8
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccccc
Q 014883 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~ 64 (416)
|++.| .+|||+|||||.+||+||..|++.|++|+|+|+++.+||.|...
T Consensus 19 ~~~~m-~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~ 67 (491)
T 3urh_A 19 YFQSM-MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV 67 (491)
T ss_dssp --------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH
T ss_pred chhhc-ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc
Confidence 44444 35999999999999999999999999999999999999987654
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.62 E-value=1.4e-08 Score=99.09 Aligned_cols=44 Identities=25% Similarity=0.255 Sum_probs=40.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
||.++||||||||++||+||+.|+++|.+|+|+|+++.+|+.+.
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 35679999999999999999999999999999999999987653
No 61
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.61 E-value=2.1e-08 Score=98.03 Aligned_cols=45 Identities=18% Similarity=0.065 Sum_probs=34.9
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-++-.++.+||||||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 16 ~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 16 ENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred CcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 344445679999999999999999999999999999999987653
No 62
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.60 E-value=2.7e-08 Score=94.82 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
|+++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 45689999999999999999999999999999999999998764
No 63
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.60 E-value=1.4e-06 Score=84.95 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=48.1
Q ss_pred CcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 277 GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 277 G~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
...++.+.+.+.+++.|.++++++.|++|..+ ++++.+|++.+|+++.||.||+.
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a 236 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVG 236 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEEC
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEEC
Confidence 34578888888889999999999999999876 67778899999999999999954
No 64
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.60 E-value=3.1e-08 Score=96.39 Aligned_cols=59 Identities=22% Similarity=0.214 Sum_probs=44.9
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
++.+.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++. +.|++.+| +++||.||+.
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-v~v~t~~g-~i~a~~VV~A 203 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADG-VSVTTDRG-TYRAGKVVLA 203 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEESSC-EEEEEEEEEC
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCe-EEEEECCC-EEEcCEEEEc
Confidence 34555553 467788888888899999999999999986 444 45776554 8999999943
No 65
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.59 E-value=3.7e-08 Score=100.81 Aligned_cols=44 Identities=20% Similarity=0.187 Sum_probs=37.9
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 17 ~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
+.+|..+||||||||++||++|+.|+++|++|+|+|+++..++.
T Consensus 18 ~~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~ 61 (591)
T 3i3l_A 18 GSHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYR 61 (591)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCC
T ss_pred cCcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCc
Confidence 34466799999999999999999999999999999999766543
No 66
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.59 E-value=2.3e-08 Score=100.17 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..+.+.+.+.+++.|.+|+++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~A 283 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVMLA 283 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEEe
Confidence 467788888888899999999999999875 444 4788889999999999943
No 67
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.59 E-value=2.4e-08 Score=95.77 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=40.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
++..+||+|||||++||+||..|++.|++|+|+|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 455799999999999999999999999999999999999987753
No 68
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.58 E-value=2.2e-08 Score=99.77 Aligned_cols=44 Identities=23% Similarity=0.257 Sum_probs=41.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.+|||+|||||.+||+||..|++.|++|+++|+++.+||.|..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 34699999999999999999999999999999999999999874
No 69
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.58 E-value=4.7e-08 Score=102.14 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=47.6
Q ss_pred CCCCCCcCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 3 GNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
|.|.+..|..+++++. ...+||||||||++||+||..|++.|++|+|+|+++++||.+..
T Consensus 373 g~e~~~~~~~~~~~~~-~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 373 GEEWRRGWHPERIRAK-ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp TTTTTTCCCSSCCCCC-SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred CcccccccCccccCcc-cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 4444444443334333 45689999999999999999999999999999999999998764
No 70
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.57 E-value=6.9e-08 Score=90.77 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCccc
Q 014883 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~~~ 62 (416)
++||+|||+|++||+||+.|+++ |++|+|+|+++.+||.++
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 46999999999999999999999 999999999999998554
No 71
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.57 E-value=3e-08 Score=94.04 Aligned_cols=44 Identities=20% Similarity=0.344 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||+|||||++||+||..|++.|++|+|+|+++.+||.+..
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 45799999999999999999999999999999999999987753
No 72
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.57 E-value=4.5e-08 Score=94.54 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.2
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
++++.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++++ +|++.+| +++||.||+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~A 214 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVVA 214 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEEC
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEEC
Confidence 44556564 568899999999999999999999999876 5554 7887666 8999999943
No 73
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.56 E-value=3.7e-08 Score=91.48 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=37.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCCcc
Q 014883 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG~~ 61 (416)
.++||||||||++||+||..|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 458999999999999999999997 99999999999998754
No 74
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.53 E-value=4.4e-08 Score=99.49 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=41.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccC
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~ 65 (416)
.+.++||||||||++|++||..|++.|++|+|+|+++.+||.+....
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ 64 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR 64 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 34578999999999999999999999999999999999999776443
No 75
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.53 E-value=5.2e-08 Score=99.25 Aligned_cols=60 Identities=27% Similarity=0.356 Sum_probs=48.0
Q ss_pred EEeecCC--cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCC---C--cEEEcCEEEE
Q 014883 271 LIYPIYG--QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG--~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~---G--~~i~Ad~VI~ 332 (416)
+.|+.+- ...+..+|++.+++.|++|+++++|++|..+ ++++++|++.+ | .+++||.||.
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~ 226 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVN 226 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEE
Confidence 4455442 2578899999999999999999999999987 77778888754 3 4789999994
No 76
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.52 E-value=6.3e-08 Score=94.71 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=36.9
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCe-EEEEccCCCCCCcc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHF 61 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~-V~vlE~~~~~GG~~ 61 (416)
||..+||||||||++||++|..|+++|.+ |+|+|+++.++...
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g 44 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLG 44 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccce
Confidence 35578999999999999999999999999 99999998876543
No 77
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.52 E-value=6.6e-08 Score=91.03 Aligned_cols=44 Identities=27% Similarity=0.385 Sum_probs=38.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
|+.++||+|||||++||+||..|+++|++|+|+|+ ..+||.+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 34469999999999999999999999999999999 578887654
No 78
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.52 E-value=8.2e-08 Score=92.21 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..++||||||||++||++|+.|+++|++|+|||++...+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3578999999999999999999999999999999874443
No 79
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.52 E-value=7.5e-08 Score=90.90 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||+|||||++||+||..|++.|++|+|+|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 45689999999999999999999999999999999 78988764
No 80
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.52 E-value=7.9e-08 Score=95.32 Aligned_cols=48 Identities=21% Similarity=0.206 Sum_probs=41.9
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
.++.....+||+|||||++||+||..|++.|++|+|+|+++++||...
T Consensus 115 ~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 115 RTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 333445568999999999999999999999999999999999999754
No 81
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.51 E-value=6.3e-08 Score=91.60 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=38.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCccc
Q 014883 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~~~ 62 (416)
++||||||||++||+||+.|+++ |++|+|+|+++.+||.++
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 58999999999999999999997 999999999999987554
No 82
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.51 E-value=6.8e-08 Score=92.92 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=45.0
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
++.+..|. ..+.++|.+.++..|++|+.+++|++|..+ ++. +.|++.+| +++||+||+
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~ 198 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIV 198 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEE
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEE
Confidence 33444443 478889999889999999999999999986 444 56877666 599999994
No 83
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.49 E-value=5.7e-08 Score=96.68 Aligned_cols=42 Identities=31% Similarity=0.317 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
.+|||||||||++||+||..|+++|++|+|+|+ +.+||.|..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 369999999999999999999999999999999 789997754
No 84
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.49 E-value=9.2e-08 Score=93.67 Aligned_cols=38 Identities=26% Similarity=0.392 Sum_probs=35.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
.++||||||||++||++|+.|+++|++|+|+|+++.++
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~ 41 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR 41 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45899999999999999999999999999999997543
No 85
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.49 E-value=5.1e-08 Score=92.05 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=39.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 58999999999999999999999999999999999999885
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.49 E-value=9.4e-08 Score=89.72 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
++||+|||||++||+||..|+++|++|+|+|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999998 8988765
No 87
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.48 E-value=8e-08 Score=97.12 Aligned_cols=49 Identities=31% Similarity=0.395 Sum_probs=43.2
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
..+.++.++||||||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 36 ~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 36 VDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCTTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred cCCCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 3344556799999999999999999999999999999999989998764
No 88
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.48 E-value=1.1e-07 Score=92.70 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=37.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
+..+||+|||||++||++|..|+++|++|+|+|+++.++.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 45689999999999999999999999999999999877654
No 89
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.48 E-value=1.1e-07 Score=94.03 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=40.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC--eEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~~~GG~~~s 63 (416)
+..+||+|||||++||+||..|++.|+ +|+|+|+++.+||.+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 346899999999999999999999999 99999999999997754
No 90
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.47 E-value=1.2e-07 Score=91.68 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..+.++|.+.++..|++|+.+++|++|..+ ++. +.|++.+| +++||.||+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~A 200 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEEe
Confidence 578899999999999999999999999986 343 56776555 7999999943
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.47 E-value=1e-07 Score=96.78 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=40.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
+.++||||||||++||+||..|+++|++|+|+|+++.+||.+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 4579999999999999999999999999999999999999775
No 92
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.47 E-value=1.2e-07 Score=91.70 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=36.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
|..+||||||||++||++|..|+++|++|+|+|+++.+++.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~ 49 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF 49 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC
Confidence 44689999999999999999999999999999999988753
No 93
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.46 E-value=7.7e-08 Score=97.48 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=41.9
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCeEEEEccCCCCCCcccccCh
Q 014883 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSLSI 66 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La-~~G~~V~vlE~~~~~GG~~~s~~~ 66 (416)
+.++||||||||++||+||..|+ +.|++|+|+|+++.+||.+....+
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~y 53 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRY 53 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCC
Confidence 45689999999999999999999 999999999999999997764433
No 94
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.46 E-value=9.3e-08 Score=90.75 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=39.6
Q ss_pred CCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 16 PPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 16 ~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
++.++..+||+|||||++||+||..|++.|++|+|+|++ .+||.+..
T Consensus 8 ~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 8 DRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp --CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred ccccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 334556799999999999999999999999999999975 78887643
No 95
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.46 E-value=1.2e-07 Score=95.26 Aligned_cols=51 Identities=20% Similarity=0.102 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~Ad~VI~ 332 (416)
..+..+|.+.+++.|++|+.+++|++|..+ + ++++|++. +|+ +++||.||.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~ 204 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVN 204 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEE
Confidence 578889999999999999999999999986 4 56788763 575 789999994
No 96
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.45 E-value=1.1e-07 Score=94.84 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.+|||+|||||.+||+||..|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998666554
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.43 E-value=1.3e-07 Score=84.94 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.+|||||||||++||.||..|++.|.+|+|+|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46899999999999999999999999999999984
No 98
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.43 E-value=8.7e-08 Score=95.75 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=39.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~ 64 (416)
+.+|||||||||.+||+||..|++.|++|+|+|++ .+||.|...
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~ 61 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNV 61 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccccc
Confidence 45799999999999999999999999999999976 889987543
No 99
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.43 E-value=1.1e-07 Score=91.35 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~s~ 64 (416)
|.++||+|||||++||+||..|++.|+ +|+|+|+++ +||.+..+
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~ 46 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHW 46 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccC
Confidence 446899999999999999999999999 999999999 99866543
No 100
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.43 E-value=1.9e-07 Score=90.82 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
+..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 44689999999999999999999999999999999874
No 101
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.42 E-value=1.3e-07 Score=88.56 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-EccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~v-lE~~~~~GG~~~s 63 (416)
.++||+|||||++||+||..|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 458999999999999999999999999999 999 788998754
No 102
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.42 E-value=1e-07 Score=90.16 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEcc----CCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~----~~~~GG~~~s 63 (416)
+..+||+|||||++||+||..|++.|++|+|+|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4578999999999999999999999999999999 6778887654
No 103
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.42 E-value=7.8e-08 Score=96.07 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=40.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||||||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 45699999999999999999999999999999999999997754
No 104
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.41 E-value=1.6e-07 Score=94.81 Aligned_cols=44 Identities=30% Similarity=0.372 Sum_probs=39.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC--------CCCCccccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSSL 64 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~--------~~GG~~~s~ 64 (416)
.+|||||||||.+||+||..|++.|++|+|+|+++ .+||.|...
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 46999999999999999999999999999999965 789987654
No 105
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.40 E-value=2.2e-07 Score=94.48 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.++||+|||||++||++|+.|+++|.+|+|||+++.++...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~ 65 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHP 65 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC
Confidence 46899999999999999999999999999999998876443
No 106
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.39 E-value=1.8e-07 Score=94.86 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=41.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccccCh
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~ 66 (416)
+.++||||||||++||+||..|++.|++|+|+|+++.+||.+....+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~y 53 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRY 53 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC
Confidence 44689999999999999999999999999999999999998754333
No 107
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.39 E-value=1.9e-07 Score=93.60 Aligned_cols=45 Identities=29% Similarity=0.312 Sum_probs=40.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEcc--------CCCCCCccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSSL 64 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~--------~~~~GG~~~s~ 64 (416)
..+|||||||||.+||+||..|++.|++|+++|+ +..+||.|..+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 56 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV 56 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc
Confidence 3469999999999999999999999999999998 67899987643
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.39 E-value=1.2e-07 Score=94.81 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=40.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.+|||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 34699999999999999999999999999999999999997654
No 109
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.39 E-value=1.5e-07 Score=93.72 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+|||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 589999999999999999999999999999999999998764
No 110
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.38 E-value=1.9e-07 Score=94.57 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
..++||||||+|++||+||+.|++ |.+|+||||.+..||.+
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 346899999999999999999999 99999999999877654
No 111
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=1.9e-07 Score=93.05 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=40.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
..++||||||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 34689999999999999999999999999999999999998764
No 112
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.38 E-value=2.6e-07 Score=95.18 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
..|||||||+|++||+||..|+++|++|+|+|+.+..||.+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~ 87 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIG 87 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTT
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccc
Confidence 4699999999999999999999999999999999999985543
No 113
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.38 E-value=1.2e-07 Score=94.06 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
.++||||||||++||+||..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4689999999999999999999999999999998764
No 114
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.37 E-value=1.4e-07 Score=94.59 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+|||||||||.+||+||..|++.|++|+|+|++ .+||.|..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~ 48 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCAR 48 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccc
Confidence 599999999999999999999999999999997 59998753
No 115
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.37 E-value=1.6e-07 Score=93.71 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 34689999999999999999999999999999999999998754
No 116
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.37 E-value=2.1e-07 Score=95.28 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCeEEEEccCCCCCCc
Q 014883 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSH 60 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~------G~~V~vlE~~~~~GG~ 60 (416)
++||||||||++||+||+.|++. |++|+||||++.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 58999999999999999999999 9999999999998875
No 117
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.37 E-value=1.9e-07 Score=95.64 Aligned_cols=53 Identities=13% Similarity=0.195 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (416)
..+.++|.+.+...|++|+++++|++|..+ +++++++|.. .+|+ ++.|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~-~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKN-QDGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEC-TTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEEC-CCCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 578888988888899999999999999985 2577878775 4565 589999994
No 118
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.36 E-value=2.6e-07 Score=93.08 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
+.++||||||||++||++|+.|+++|++|+|+|+++..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 45699999999999999999999999999999999844
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.36 E-value=2e-07 Score=92.78 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||||||||++|++||..|++.|++|+|+|++ .+||.|..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 45689999999999999999999999999999998 78998763
No 120
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.36 E-value=1.8e-07 Score=87.90 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=37.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
|..+||+|||||++||+||..|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 45689999999999999999999999999999964 7888764
No 121
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.36 E-value=1.9e-07 Score=92.81 Aligned_cols=42 Identities=31% Similarity=0.442 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
.+|||||||||.+|++||..|++.|++|+|+|++ .+||.|..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~ 44 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVN 44 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcC
Confidence 4699999999999999999999999999999998 78998764
No 122
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.36 E-value=3.3e-07 Score=91.99 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
+.++||+|||||++||++|+.|+++|.+|+|||+++.++.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 4568999999999999999999999999999999987753
No 123
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.36 E-value=1.8e-07 Score=93.13 Aligned_cols=42 Identities=26% Similarity=0.491 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+++||||||||++|++||..|++.|++|+|+|++ .+||.+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 4689999999999999999999999999999998 78987754
No 124
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.36 E-value=2.4e-07 Score=90.46 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=35.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCc
Q 014883 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~ 60 (416)
.++||||||||++||++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 358999999999999999999999 9999999998665554
No 125
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.36 E-value=2.4e-07 Score=92.91 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=38.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 44689999999999999999999999999999999999865
No 126
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.36 E-value=1.9e-07 Score=92.72 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=39.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~ 64 (416)
+|||||||||.+|++||..|++.|++|+|+|+++.+||.|...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~ 43 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRV 43 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCcccee
Confidence 3899999999999999999999999999999999999987643
No 127
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.36 E-value=2.7e-07 Score=89.77 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
.++||||||||++||++|..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 128
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.35 E-value=2.8e-07 Score=90.76 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
++||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999987
No 129
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.35 E-value=2e-07 Score=92.36 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||||||||.+|++||..|++.|++|+|+|++ .+||.|..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~ 44 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVN 44 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccc
Confidence 34699999999999999999999999999999998 78998764
No 130
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.34 E-value=2.1e-07 Score=93.05 Aligned_cols=43 Identities=21% Similarity=0.346 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+.++||||||||.+|++||..|++.|++|+|+|++ .+||.|..
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n 51 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVN 51 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHH
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcc
Confidence 34699999999999999999999999999999998 78998764
No 131
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.34 E-value=4e-07 Score=92.22 Aligned_cols=38 Identities=24% Similarity=0.367 Sum_probs=35.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
.++||||||||++||++|+.|++.|.+|+|||+++.++
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 46899999999999999999999999999999998765
No 132
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.34 E-value=3.8e-07 Score=93.03 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
.++||||||||++||++|+.|+++|++|+|||+++.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 35899999999999999999999999999999998765
No 133
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.34 E-value=3.1e-07 Score=91.83 Aligned_cols=45 Identities=29% Similarity=0.312 Sum_probs=38.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC---------CCCCccccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP---------FYGSHFSSL 64 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~---------~~GG~~~s~ 64 (416)
+.+|||||||||.+|++||..|++.|++|+|+|++. .+||.|...
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~ 60 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNV 60 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeeccc
Confidence 456999999999999999999999999999999522 388887643
No 134
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.34 E-value=3.7e-07 Score=85.44 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~s 63 (416)
|||+|||||++||+||..|++.|+ +|+|+|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 78887654
No 135
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.34 E-value=2.3e-07 Score=95.92 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (416)
..|.++|.+.+...|++|+.++.|++|..+ +|++++|.. .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 378899999888899999999999999987 788888765 4566 489999994
No 136
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.33 E-value=2.7e-07 Score=94.28 Aligned_cols=47 Identities=34% Similarity=0.485 Sum_probs=39.7
Q ss_pred CCCCCCCC-CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC-CCC
Q 014883 12 VPPYPPIE-PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (416)
Q Consensus 12 ~~~~~~~~-~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~-~~G 58 (416)
|||...+. ..+|||||||||++|+.||+.|++.|.+|+|+|++. .+|
T Consensus 17 ~~~~~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 17 VPRGSHMFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp ECCCSCEECSSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CCCCCCCCCCCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 67755543 346999999999999999999999999999999984 455
No 137
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.32 E-value=3.4e-07 Score=96.18 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
...+||+|||||++||+||..|++.|++|+|+|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 34689999999999999999999999999999999999998764
No 138
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.32 E-value=4.2e-07 Score=92.76 Aligned_cols=60 Identities=18% Similarity=0.304 Sum_probs=46.1
Q ss_pred EEeecCCc--chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 014883 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG~--~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~Ad~VI~ 332 (416)
+.|+.+.. ..+..++++.++..|++|+.+++|++|..+ ++++++|++. +|+ +++||.||.
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~ 244 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVIN 244 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEE
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEE
Confidence 44554322 367788888889999999999999999987 6777788753 343 699999994
No 139
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.31 E-value=5.8e-07 Score=93.00 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYG 58 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~G 58 (416)
.++||+|||||++||++|+.|++ .|.+|+|||+++.++
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999998764
No 140
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.29 E-value=3.1e-07 Score=91.33 Aligned_cols=43 Identities=30% Similarity=0.377 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
|+++||||||||.+|++||..|++.|++|+|+|+++ +||.|..
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~ 46 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLN 46 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCC
Confidence 346999999999999999999999999999999988 8997754
No 141
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.29 E-value=5.3e-07 Score=93.27 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHhc--CcEEEcCCceeEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~--Gg~i~l~~~V~~I~~~~~~g---~~~gV~l---~~G~--~i~Ad~VI~ 332 (416)
..+.++|.+.++.. |.+|+.++.|.+|.++ ++ +++||.. .+|+ .|+|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~--~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD--KNTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC--SSSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe--CCccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 46777888877777 9999999999999987 44 8888864 3454 589999994
No 142
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.29 E-value=5.5e-07 Score=90.41 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.++||+|||||++||++|+.|+++|.+|+|||+++.++.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999987753
No 143
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.29 E-value=3.5e-07 Score=91.68 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.+|++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 283 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLA 283 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEc
Confidence 367788888888999999999999999875 33235788889989999999944
No 144
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.29 E-value=2.9e-07 Score=87.94 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G------~~V~vlE~~~~~GG 59 (416)
+||||||||++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 39999999999999999999998 99999999875444
No 145
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.29 E-value=3.8e-07 Score=93.69 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (416)
..|.++|.+.+...|++|+.++.|++|..+ +|++++|.. .+|+ .++|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478888988888899999999999999987 788888775 3565 689999984
No 146
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.29 E-value=2.8e-07 Score=92.41 Aligned_cols=53 Identities=9% Similarity=0.156 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.+|++++.|++|..+ ++..+.|++.+|+++.||.||+.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 287 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMA 287 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEEC
Confidence 367788888888999999999999999875 33235788889999999999954
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.28 E-value=5.4e-07 Score=87.53 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
.+|+|||||++||++|..|+++|++|+||||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 48999999999999999999999999999997654
No 148
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.27 E-value=4.2e-07 Score=88.16 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
++||+|||||++||++|+.|+++|++|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999875
No 149
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.26 E-value=5.6e-07 Score=83.38 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=43.1
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 014883 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (416)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (416)
...+..+...+.+.+.+.++..|.+++. +.|++|.. ++ .|++.+|+++.+|.||+..-
T Consensus 166 v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~---~~---~v~~~~g~~~~~D~vi~a~G 223 (297)
T 3fbs_A 166 TTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAG---HA---DVVLADGRSIALAGLFTQPK 223 (297)
T ss_dssp EEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEET---TE---EEEETTSCEEEESEEEECCE
T ss_pred EEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeec---CC---eEEeCCCCEEEEEEEEEccC
Confidence 3344444446677777888899999995 99999863 22 67788999999999996543
No 150
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.26 E-value=6.2e-07 Score=91.26 Aligned_cols=39 Identities=28% Similarity=0.357 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC-CCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~-~~GG 59 (416)
.+|||||||||++|+.||..|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 46999999999999999999999999999999984 5553
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=3.8e-07 Score=90.53 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
.+|||||||||.+|++||..|++.|++|+|+|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 468999999999999999999999999999999 789998864
No 152
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.24 E-value=7e-07 Score=88.78 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCe---EEEEccCCCCCCccccc
Q 014883 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~---~G~~---V~vlE~~~~~GG~~~s~ 64 (416)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~ 50 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT 50 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecC
Confidence 699999999999999999999 9999 99999999999987654
No 153
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=4.8e-07 Score=89.75 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=38.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
+|||||||||.+|++||..|++.|++|+|+|++ .+||.|..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~ 43 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLN 43 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcC
Confidence 589999999999999999999999999999998 89998754
No 154
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.24 E-value=5.7e-07 Score=89.27 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CeEEEEccCCCCCCcc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G-----~~V~vlE~~~~~GG~~ 61 (416)
..+||||||||++||+||..|++.| .+|+|||+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998444
No 155
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.23 E-value=6.6e-07 Score=91.32 Aligned_cols=46 Identities=20% Similarity=0.301 Sum_probs=36.4
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC-CCCCc
Q 014883 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGSH 60 (416)
Q Consensus 15 ~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~-~~GG~ 60 (416)
..+....+|||||||||++||.||..|++.|.+|+|+|++. .+|+.
T Consensus 14 ~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~ 60 (641)
T 3cp8_A 14 LVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARM 60 (641)
T ss_dssp ------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC
T ss_pred ccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCC
Confidence 33444557999999999999999999999999999999985 56653
No 156
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.22 E-value=1.1e-06 Score=83.88 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
+||||||||++|+.||..|+++|++|+++|++...+.-.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999987555443
No 157
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.22 E-value=7.6e-07 Score=86.10 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~ 57 (416)
.||||||||++||++|..|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3899999999999999999999 9999999999887
No 158
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.22 E-value=3.9e-07 Score=91.49 Aligned_cols=50 Identities=10% Similarity=0.123 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
++.+.+.+.+++.|.+|+++++|++|..+ ++. +.|++.+|+++.||.||+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~ 273 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALM 273 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEE
Confidence 67788888888999999999999999875 444 467778888999999994
No 159
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.21 E-value=9.8e-07 Score=89.68 Aligned_cols=51 Identities=25% Similarity=0.234 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHhc-CcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 014883 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (416)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI 331 (416)
..+.+.|.+.+++. |++++++ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~-~~g~~~~v~~~~G~~i~ad~vI 245 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRD-ANGNIESVRTATGRVFDADLFV 245 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEEECSEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEECCEEE
Confidence 46888888888888 9999999 99999875 3566778988889899999999
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.21 E-value=9e-07 Score=82.74 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
+|||+|||||++||+||..|++.|++|+|+|+ ++||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5788765
No 161
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.21 E-value=1.1e-06 Score=89.03 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI 331 (416)
..+.+.|.+.++..|++++.+ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV 215 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLN-NRGYISNLLTKEGRTLEADLFI 215 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEECCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEc-CCCcEEEEEECCCcEEEeCEEE
Confidence 577788888888899999999 89999875 2566678888888899999999
No 162
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=6.9e-07 Score=89.70 Aligned_cols=53 Identities=8% Similarity=0.014 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcE-EEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~-i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.++++++.|++|..+. ++. +.|++.+|++ +.||.||+.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~~v~~~~g~~~~~~D~vi~a 270 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVS-DKN-LSIHLSDGRIYEHFDHVIYC 270 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTC-EEEEETTSCEEEEESEEEEC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-Cce-EEEEECCCcEEEECCEEEEC
Confidence 4677888888889999999999999998641 333 4677889988 999999954
No 163
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.20 E-value=1.4e-06 Score=90.77 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
..+||||||||.+||.||..|++.|++|+|+|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 458999999999999999999999999999999999999864
No 164
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.19 E-value=5.9e-07 Score=90.06 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=39.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
..++||||||||++||+||..|++. ++|+|+|+++++||.+..
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 3468999999999999999999999 999999999999998764
No 165
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.19 E-value=7.9e-07 Score=89.85 Aligned_cols=53 Identities=8% Similarity=0.002 Sum_probs=44.6
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
-.++++.+.+..+..|.++++++.|+++..+ ++. +.|++.+++++.+|.|++.
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLvA 314 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLYA 314 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEEc
Confidence 3578888888889999999999999999886 454 5677889999999999953
No 166
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.17 E-value=6.8e-07 Score=91.69 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=36.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSH 60 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~ 60 (416)
.++||||||||++||+||+.|+++| .+|+||||....+|.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 3689999999999999999999999 999999999876654
No 167
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.16 E-value=1.5e-06 Score=86.59 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=33.5
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
||||||+|++||+||..|+++|++|+|+||. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 8999999999999999999999999999999 56664
No 168
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.15 E-value=1.5e-06 Score=74.47 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
|||+|||||++|+.+|..|++.|.+|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 169
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.15 E-value=2.2e-06 Score=88.65 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=40.8
Q ss_pred chHHHHHHHHHHhc-Cc-EEEcCCceeEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~-Gg-~i~l~~~V~~I~~~~~~g---~~~gV~l---~~G~--~i~Ad~VI~ 332 (416)
..+...|.+.++.. |. +|+.++.|++|..+ ++ +++||.. .+|+ ++.|+.||+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35677777777777 99 99999999999986 55 8888764 4665 589999994
No 170
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.14 E-value=1.3e-06 Score=94.52 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
..+||||||+|++||+||..|++.|++|+|+|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999988
No 171
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.13 E-value=1.4e-06 Score=88.06 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~ 56 (416)
.+||+||||+|.+|+++|.+|++ .|++|+|||+..+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 37999999999999999999998 7899999999654
No 172
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.12 E-value=1.7e-06 Score=87.77 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
.+||+||||+|.+|+++|.+|+++|++|+|||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998754
No 173
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.11 E-value=1.9e-06 Score=87.75 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEEccCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~ 56 (416)
..+||+||||||.+||++|.+|++.| .+|+||||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 79999999765
No 174
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.11 E-value=1.6e-06 Score=90.07 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCeEEEEccCCCC--CCcccccC
Q 014883 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSLS 65 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-----~G~~V~vlE~~~~~--GG~~~s~~ 65 (416)
.++||+|||||++||++|+.|++ .|.+|+|+|+++.. .|++..+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~ 58 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQ 58 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEC
Confidence 46899999999999999999999 99999999998764 45554444
No 175
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.09 E-value=1.9e-06 Score=85.98 Aligned_cols=51 Identities=8% Similarity=0.090 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.++..|.+|++++.|++|.. ++++..|.+ +++++.||.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~a 277 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLVS 277 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEEC
Confidence 46778888888899999999999999975 345556765 4568999999943
No 176
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.08 E-value=2.6e-06 Score=85.99 Aligned_cols=41 Identities=15% Similarity=0.356 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
+..+||+|||||++||+||..|++.|++|+|+|+ ++||.+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 3468999999999999999999999999999996 5888775
No 177
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.06 E-value=2e-06 Score=86.83 Aligned_cols=51 Identities=10% Similarity=0.210 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHh-cCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 014883 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (416)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI 331 (416)
..+.+.|.+.++. .|++++.+ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV 226 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINN-QHGDIEKLITKQNGEISGQLFI 226 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEec-CCCcEEEEEECCCCEEEcCEEE
Confidence 4677888888888 89999999 59999876 2566678888888889999999
No 178
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.06 E-value=1.8e-06 Score=85.55 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-C------CCeEEEEccCCCCCCccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 62 (416)
..+||+|||||++|+.||..|++ . |++|+|+|+++.+||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 45899999999999999999999 7 999999999999998764
No 179
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.04 E-value=2.7e-06 Score=87.14 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.++++++.|++|..+ ++ +|++.+|+++.||.||+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILA 277 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEc
Confidence 467788888889999999999999999754 33 467789999999999954
No 180
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.04 E-value=2.8e-06 Score=83.99 Aligned_cols=41 Identities=10% Similarity=0.119 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCCCcc
Q 014883 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~~ 61 (416)
+++||||||||++||+||..|++. |++|+|+|+++++++..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 457999999999999999999998 89999999999887544
No 181
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.03 E-value=2.1e-06 Score=86.95 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=34.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+||+||||+|.+|+++|.+|++ |++|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999877644
No 182
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.03 E-value=2.3e-06 Score=85.18 Aligned_cols=53 Identities=11% Similarity=0.133 Sum_probs=44.4
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..++.+.+.+.+++.|.+++++++|++|..+ ++++ .|++.+|+++.||.||+.
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g~~i~aD~Vv~a 253 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKV-ARVITDKRTLDADLVILA 253 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBE-EEEEESSCEEECSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeE-EEEEeCCCEEEcCEEEEC
Confidence 4578888888889999999999999999874 5554 477789999999999954
No 183
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.03 E-value=2.7e-06 Score=87.39 Aligned_cols=43 Identities=30% Similarity=0.329 Sum_probs=36.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC-C-------CCCCccc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-P-------FYGSHFS 62 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~-~-------~~GG~~~ 62 (416)
...|||+|||||.+||+||..|++.|++|+|+|+. + ++||.|.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~ 155 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCV 155 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEe
Confidence 34699999999999999999999999999999983 3 4677543
No 184
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.02 E-value=3.4e-06 Score=91.82 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCCCCcc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~ 61 (416)
..+||+|||||.+||+||..|++.|+ +|+|+|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999975
No 185
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.01 E-value=2.2e-06 Score=86.27 Aligned_cols=51 Identities=22% Similarity=0.255 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV 331 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI 331 (416)
..+.+.|.+.++..|++++.+ .|++|..+ +++.+++|++.+|++++||.||
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~~~~~~v~~~~g~~~~ad~vV 223 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQD-ERGWISGVHTKQHGEISGDLFV 223 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEEcCEEE
Confidence 467788888888899999999 99999885 2666778988888899999999
No 186
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.97 E-value=5.6e-06 Score=80.97 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
...+.+.+.+.+++.|.+|++++.|++|..+ ++++.+|++.+|+++.||.||+.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a 246 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVG 246 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEEC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEEC
Confidence 4577888888889999999999999999875 67777899999999999999964
No 187
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.97 E-value=3.7e-06 Score=83.39 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 62 (416)
..+||+|||+|++|+.||..|++.| ++|+|+|+++++||+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999999 99999999999998763
No 188
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.97 E-value=4.8e-06 Score=84.74 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=34.2
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCC
Q 014883 18 IEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (416)
Q Consensus 18 ~~~~~~DViIIGaGl~GL~aA~~La~~-G~~V~vlE~~~ 55 (416)
+...+||+||||||.+||++|.+|++. |++|+||||..
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 445679999999999999999999975 89999999986
No 189
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.92 E-value=5.8e-06 Score=81.82 Aligned_cols=52 Identities=6% Similarity=0.137 Sum_probs=42.6
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
-..+++.+.+.+++.|.+|+++++|++|..+ ++++ .|++.+| ++.||.||+.
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEEC
Confidence 3567788888889999999999999999865 5554 7877666 8999999943
No 190
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.92 E-value=7.2e-06 Score=82.33 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
+.+||+||||+|.+|+++|.+|++.|++|+|+|+..+.+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999998766
No 191
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.91 E-value=8.9e-06 Score=79.97 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=44.9
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEE--ecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLT--DQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.++++++.|++|.. + ++++.+|++.+|+++.||.||+.
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~v~~v~~~~G~~i~~D~Vv~a 245 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTD--QQKVTAVLCEDGTRLPADLVIAG 245 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTT--TCCEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccC--CCcEEEEEeCCCCEEEcCEEEEC
Confidence 46777888888899999999999999986 3 56666888889999999999954
No 192
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.89 E-value=5.9e-06 Score=81.17 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.5
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~--~G~~V~vlE~~~~~GG~~ 61 (416)
.||||||||++||+||..|++ .|++|+|+|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.89 E-value=7.9e-06 Score=81.79 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.+.+.+.+.+++.|.++++++.|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a 277 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAA 277 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEEC
Confidence 57777888888999999999999999865 454 4788889999999999954
No 194
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.88 E-value=8e-06 Score=80.81 Aligned_cols=53 Identities=19% Similarity=0.205 Sum_probs=43.6
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..++.+.+.+.+++.|.+++++++|++|..+ ++++..|++ +|+++.||.||+.
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a 242 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILC 242 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEEC
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEEC
Confidence 3567888888889999999999999999865 566656764 8889999999943
No 195
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.87 E-value=1.3e-05 Score=80.62 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
+.+||+||||+|.+|+++|.+|++.|++|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45799999999999999999999999999999998754
No 196
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.87 E-value=9e-06 Score=78.59 Aligned_cols=52 Identities=17% Similarity=0.091 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..+.+.+.+.++..|.++++++.|++|..+ ++. +.|++.+|+++.||.||+.
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSA 238 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEEC
Confidence 457788888888999999999999999875 443 5788889999999999954
No 197
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.85 E-value=5.9e-06 Score=80.55 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=40.2
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p 334 (416)
..+.+.+.+.+++.|.++++++.|++|.. + +|++++|+++.||.||+.+
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~---~v~~~~g~~~~~D~vi~a~ 266 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE----H---EIVDEKGNTIPADITILLP 266 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS----S---EEEETTSCEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC----C---eEEECCCCEEeeeEEEECC
Confidence 46778888888899999999999999853 2 3667899999999999543
No 198
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.85 E-value=8e-06 Score=82.92 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=34.9
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~GG 59 (416)
+||+||||||.+|+++|.+|++ .|++|+||||.....+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999887643
No 199
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.82 E-value=1e-05 Score=80.95 Aligned_cols=51 Identities=10% Similarity=0.155 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.+|++++.|++|.. ++++..|++ +|+++.||.||+.
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~a 286 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVILA 286 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEEC
Confidence 46777888888899999999999999974 344445665 7889999999944
No 200
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.80 E-value=1.2e-05 Score=79.41 Aligned_cols=51 Identities=12% Similarity=0.065 Sum_probs=40.3
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.++++++.|++|..+ ++++.|++ +|+++.||.||+.
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~-~~~~i~~d~vi~a 241 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD---GRVQKVVT-DKNAYDADLVVVA 241 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEE-CCCEEECCEEEEC
Confidence 467788888888899999999999999753 44445665 6678999999943
No 201
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.80 E-value=1.4e-05 Score=81.59 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCeEEEEccCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~ 57 (416)
+.+||+||||+|.+|+++|.+|++ .|++|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 457999999999999999999999 89999999998655
No 202
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.78 E-value=1.8e-05 Score=80.13 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=35.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG 59 (416)
..||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 479999999999999999999998 999999999977643
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.77 E-value=1.6e-05 Score=77.59 Aligned_cols=48 Identities=23% Similarity=0.266 Sum_probs=40.3
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.++++++.|++|. + + .|++.+|+++.||.||+.
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a 234 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVG 234 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEEC
Confidence 3577788888889999999999999997 4 3 567789999999999954
No 204
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.75 E-value=1.7e-05 Score=78.11 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~~ 57 (416)
+.||||||||++||+||..|++ .|++|+|+|++++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4699999999999999999999 89999999999865
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=2.5e-05 Score=75.06 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
-||||||||.+|++||..|++.| +|+|+|+++..+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 59999999999999999999999 999999998653
No 206
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.68 E-value=2.4e-05 Score=79.66 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (416)
.||+|||||++||+||..|++. |++|+|+|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999998 89999999999987
No 207
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.67 E-value=3.1e-05 Score=75.58 Aligned_cols=52 Identities=12% Similarity=0.145 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.+++.|.++++++.|++|..+ +++.+|++.+|+++.||.||+.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a 236 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALIC 236 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEe
Confidence 456777888888899999999999999754 3556788899999999999954
No 208
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.52 E-value=2.4e-05 Score=78.43 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=30.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
...|||||||+|.+||++|+.|.++|...+++|+.+..|+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 345899999999999999999999877666666666555543
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.47 E-value=6.8e-05 Score=75.13 Aligned_cols=38 Identities=11% Similarity=0.269 Sum_probs=34.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..++..|||||||++|+.+|..|++.+++|+|+|++++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 34456899999999999999999999999999999975
No 210
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.45 E-value=9.9e-05 Score=71.32 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=35.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
++..|+|||||++|++||..|++.|.+|+|+|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 356899999999999999999999999999999999873
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.38 E-value=9.8e-05 Score=71.57 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~~ 61 (416)
..|||||||.+|++||.+|++.| .+|+|+|+++....+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p 43 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY 43 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc
Confidence 47999999999999999999887 5899999998765443
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.32 E-value=0.00013 Score=71.68 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=39.5
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
-.++.+.+.+..++.|.++++++.|+++. .. .|++++|+++.||.||+
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~ 234 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIE 234 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEE
Confidence 35677778888889999999999999874 33 36678999999999994
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.26 E-value=0.00015 Score=71.02 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.3
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEEccCCCC
Q 014883 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~ 57 (416)
.|||||||++|++||..|++.+ ++|+|+|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 7999999999999999999876 899999999863
No 214
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.71 E-value=0.00048 Score=55.23 Aligned_cols=53 Identities=4% Similarity=-0.066 Sum_probs=44.2
Q ss_pred cEEEcCEEEEC-CCCCCCCCCCCchhhhhhhhhhccccCCcceEEEEEEEecCCCC
Q 014883 323 QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (416)
Q Consensus 323 ~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~k~i~i~~~p~~ 377 (416)
++++||+||++ |...+.. +.++|+||..+.+..++..+|.+.|.++.|++||=
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW 57 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWW 57 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGG
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCC
Confidence 47899999976 4444454 46889999999999898999999999999999974
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.39 E-value=0.003 Score=62.00 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=36.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..+++|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999988764
No 216
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.36 E-value=0.0028 Score=61.04 Aligned_cols=39 Identities=15% Similarity=0.003 Sum_probs=36.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~ 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh
Confidence 479999999999999999999999999999999987664
No 217
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.25 E-value=0.0046 Score=51.18 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|+|||+|.-|+..|..|.+.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 218
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.22 E-value=0.0047 Score=49.70 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|||+|..|...|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999854
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.14 E-value=0.0044 Score=57.46 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+++++-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3799999999999999999999999999999988643
No 220
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.00 E-value=0.0096 Score=48.28 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
-.|+|||.|--|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999974
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.98 E-value=0.008 Score=49.51 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999863
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.96 E-value=0.0055 Score=60.38 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999999875
No 223
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.92 E-value=0.0074 Score=57.90 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=35.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.+++|||+|..|+-+|..|++.|.+|+++|+++++..+.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 479999999999999999999999999999999887654
No 224
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.92 E-value=0.0079 Score=48.69 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..++|+|+|.-|...|..|+++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999863
No 225
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.90 E-value=0.0068 Score=59.82 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 226
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.85 E-value=0.0074 Score=59.36 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+|+|||+|..|+.+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988754
No 227
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.84 E-value=0.0073 Score=59.40 Aligned_cols=37 Identities=27% Similarity=0.198 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5899999999999999999999999999999998765
No 228
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.83 E-value=0.0083 Score=51.02 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=32.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC-CCeEEEEccCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~-G~~V~vlE~~~ 55 (416)
...-.|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3345799999999999999999999 99999999864
No 229
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.80 E-value=0.0077 Score=57.51 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999998866
No 230
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.78 E-value=0.0087 Score=59.22 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+++++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999998763
No 231
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.65 E-value=0.029 Score=54.35 Aligned_cols=41 Identities=20% Similarity=0.287 Sum_probs=37.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCe--EEEEccCCCCCCc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKS--VLHLDPNPFYGSH 60 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~--V~vlE~~~~~GG~ 60 (416)
+.++||||||||++||+||..|++.|++ |+|+|+++.++..
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~ 49 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE 49 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC
Confidence 3468999999999999999999999998 9999999987643
No 232
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.58 E-value=0.013 Score=45.38 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~ 54 (416)
..|+|+|+|..|...+..|.+.| ++|.+++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 47999999999999999999999 999999986
No 233
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.58 E-value=0.012 Score=56.97 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999988765
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.57 E-value=0.011 Score=58.08 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988754
No 235
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.54 E-value=0.011 Score=54.66 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987653
No 236
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.48 E-value=0.015 Score=53.40 Aligned_cols=36 Identities=28% Similarity=0.318 Sum_probs=32.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
|....|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 334579999999999999999999999999999875
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.37 E-value=0.014 Score=57.53 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 3799999999999999999999999999999988753
No 238
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.29 E-value=0.017 Score=53.75 Aligned_cols=47 Identities=13% Similarity=0.104 Sum_probs=33.6
Q ss_pred CCCCC-CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 10 LPVPP-YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 10 ~~~~~-~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
|+.++ .+..+.....|.|||+|.-|...|..|+++|++|++++++..
T Consensus 8 ~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 8 HHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp ----------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cccccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 44444 333334446899999999999999999999999999998753
No 239
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.22 E-value=0.011 Score=58.58 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 5799999999999999999999999999999988766
No 240
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.20 E-value=0.031 Score=53.11 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=36.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
+.++||||||||++||++|+.|+++|++|+|||+++..+|
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 4569999999999999999999999999999999975554
No 241
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.18 E-value=0.018 Score=54.78 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=32.2
Q ss_pred CCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 16 PPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 16 ~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|+|+....|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3566777899999999999999999999999999999874
No 242
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.15 E-value=0.017 Score=57.28 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+++++-.+
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 232 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG 232 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh
Confidence 47999999999999999999999999999999987653
No 243
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.14 E-value=0.02 Score=55.78 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999987654
No 244
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.13 E-value=0.02 Score=56.59 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999998865
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.10 E-value=0.019 Score=56.53 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 246
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.09 E-value=0.019 Score=53.47 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
-.|.|||||.-|..-|..++.+|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 247
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.08 E-value=0.022 Score=56.64 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=35.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 47999999999999999999999999999999998654
No 248
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.07 E-value=0.016 Score=57.42 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999998764
No 249
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.04 E-value=0.021 Score=55.28 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh
Confidence 47999999999999999999999999999999987654
No 250
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.01 E-value=0.022 Score=50.93 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 13 PPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 13 ~~~~~~~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
+.+.........|.|||+|.-|...|..|+++|++|++++++.
T Consensus 10 ~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 10 HHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3344444455689999999999999999999999999999864
No 251
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.99 E-value=0.029 Score=54.96 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|.|||+|.-|...|..|+++|++|+++|.+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999999876
No 252
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.94 E-value=0.025 Score=55.46 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=35.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
+|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 8999999999999999999999999999999987765
No 253
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.87 E-value=0.028 Score=51.91 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999874
No 254
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.87 E-value=0.023 Score=45.73 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..|+|+|+|..|...|..|++.|++|.++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999986
No 255
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.86 E-value=0.022 Score=53.86 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|.+|+-+|..|++.|.+|+++|+++++.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 379999999999999999999999999999988765
No 256
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.86 E-value=0.026 Score=55.41 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||.|.+|+++|..|++.|++|.+.|+++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999999999999999976
No 257
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.85 E-value=0.017 Score=56.96 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 258
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.81 E-value=0.026 Score=51.98 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 579999999999999999999999999999998873
No 259
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.79 E-value=0.025 Score=55.90 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-.++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 4799999999999999999999999999999998754
No 260
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.73 E-value=0.026 Score=56.17 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4799999999999999999999999999999998764
No 261
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.72 E-value=0.027 Score=53.20 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
....|.|||+|..|...|..|+++|++|.+++++.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34589999999999999999999999999998863
No 262
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.69 E-value=0.023 Score=49.70 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|+|||+|.-|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999863
No 263
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.67 E-value=0.033 Score=53.72 Aligned_cols=40 Identities=25% Similarity=0.270 Sum_probs=36.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~ 182 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVV 182 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhcc
Confidence 4699999999999999999999999999999998876543
No 264
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.65 E-value=0.033 Score=56.01 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|||+|.+|+-+|..|++.|.+|+|+++.++
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999876
No 265
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.59 E-value=0.032 Score=54.97 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4799999999999999999999999999999988754
No 266
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.59 E-value=0.03 Score=51.56 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
..|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 37999999999999999999999999999999887
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.57 E-value=0.026 Score=55.11 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=35.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.++|||+|..|+-.|..|++.|.+|+++|+.+++....
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~ 186 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM 186 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc
Confidence 79999999999999999999999999999999886543
No 268
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.53 E-value=0.033 Score=54.89 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999998765
No 269
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.53 E-value=0.031 Score=54.78 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..++|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 4799999999999999999999999999999988755
No 270
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.48 E-value=0.032 Score=55.12 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|.-|+..|..|+++|++|+++|.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 271
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.45 E-value=0.031 Score=55.05 Aligned_cols=37 Identities=11% Similarity=0.037 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|.+|+-.|..|++.|.+|+++++++++-+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~ 234 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG 234 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC
Confidence 4699999999999999999999999999999887543
No 272
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.42 E-value=0.038 Score=55.68 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
...|+|||+|.+|+-+|..|++.|.+|+|+++.+++
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 357999999999999999999999999999998763
No 273
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.40 E-value=0.034 Score=51.69 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998763
No 274
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.37 E-value=0.038 Score=52.38 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|.-|.+.|..|+++|++|.++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999863
No 275
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.36 E-value=0.044 Score=53.31 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
+..+.|||.|..||..|..|+++|++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4589999999999999999999999999999874
No 276
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.35 E-value=0.037 Score=51.62 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 277
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.34 E-value=0.037 Score=48.84 Aligned_cols=36 Identities=14% Similarity=0.253 Sum_probs=31.1
Q ss_pred CCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 20 PTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.....|+|.|| |.-|...+..|+++|++|.++.++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 34457999998 9999999999999999999998864
No 278
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.32 E-value=0.094 Score=50.11 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
.++||||||||++||++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 46899999999999999999999999999999998765
No 279
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.31 E-value=0.037 Score=51.12 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|.+|+-.|..|++.|.+|+++++++++.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999998763
No 280
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.29 E-value=0.039 Score=51.23 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|.+|+-+|..|++.|.+|+++++++++.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 379999999999999999999999999999998764
No 281
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.28 E-value=0.049 Score=47.41 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
...|.|||+|.-|.+.|..|+++|++|.+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 34799999999999999999999999999998865
No 282
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.27 E-value=0.038 Score=51.58 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 479999999999999999999999999999998773
No 283
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=94.25 E-value=0.11 Score=45.81 Aligned_cols=50 Identities=18% Similarity=0.092 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHhc-CcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 280 ELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 280 ~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
.+.+.|.+.++.. |.+++ +++|++|..+ ++++++|++.+|++++||.||.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~ 119 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVL 119 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEE
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEE
Confidence 5667777777776 88888 6899999887 6777788888898999999994
No 284
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.23 E-value=0.039 Score=55.65 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999987754
No 285
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.23 E-value=0.04 Score=51.72 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..|.|||+|--|.+.|..|+++|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999974
No 286
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.22 E-value=0.036 Score=51.57 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999988754
No 287
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.20 E-value=0.031 Score=54.66 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|.|||.|.+|+++|..|++.|++|++.|.+...=
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 469999999999999999999999999999987653
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.18 E-value=0.039 Score=55.61 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
...|+|||+|.+|+-+|..|++.|.+|+|+++.+++
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 357999999999999999999999999999998763
No 289
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.16 E-value=0.036 Score=54.96 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 47999999999999999999999999999999988653
No 290
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.16 E-value=0.04 Score=53.93 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~-V~vlE~~~~~ 57 (416)
.+|+|||+|.+|+-.|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998876
No 291
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.08 E-value=0.051 Score=49.53 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
.|.|||+|..|...|..|+++|++|.+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998764
No 292
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.07 E-value=0.048 Score=50.83 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|--|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999875
No 293
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.07 E-value=0.052 Score=50.89 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
..|.|||||..|.+.|..|+++|+ +|.++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 489999999999999999999998 999999875
No 294
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=94.06 E-value=0.062 Score=54.29 Aligned_cols=44 Identities=27% Similarity=0.357 Sum_probs=39.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (416)
.+.+|||||||||++||++|+.|+++|++|+|||+++..||...
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~ 58 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSS 58 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGG
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCccc
Confidence 34579999999999999999999999999999999987777654
No 295
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.04 E-value=0.048 Score=53.85 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-.++|||+|..|+-.|..|++.|.+|+++++.+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc
Confidence 4799999999999999999999999999999988753
No 296
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.02 E-value=0.044 Score=54.01 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-eEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~-G~-~V~vlE~~~~ 56 (416)
..|.|||+|.-|+..|..|+++ |+ +|+++|.+..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 297
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.02 E-value=0.048 Score=50.33 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 379999999999999999999999999999864
No 298
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.02 E-value=0.039 Score=51.28 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~ 54 (416)
...|.|||+|.-|...|..|+++|+ +|.+++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4589999999999999999999999 99999996
No 299
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.00 E-value=0.051 Score=50.23 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|.-|...|..|+++|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 300
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.99 E-value=0.057 Score=53.11 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=35.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++-...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC
Confidence 479999999999999999999999999999999876543
No 301
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.97 E-value=0.05 Score=53.30 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999987654
No 302
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.95 E-value=0.053 Score=52.99 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
...+.|||+|.-|+..|..|+++|++|++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999865
No 303
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.92 E-value=0.046 Score=50.34 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
...|.|||.|.-|...|..|+++|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999998864
No 304
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.90 E-value=0.047 Score=50.48 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
..|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 379999999999999999999999999999988764
No 305
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=93.90 E-value=0.037 Score=54.27 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.9
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~ 57 (416)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45899999999999999999999 9999999998764
No 306
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.85 E-value=0.051 Score=50.45 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|--|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999875
No 307
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.81 E-value=0.11 Score=48.92 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
++||||||||++||++|+.|+++|++|+|||+++..+|...+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~ 43 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSH 43 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC
Confidence 489999999999999999999999999999999888765443
No 308
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.80 E-value=0.074 Score=52.33 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 309
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.79 E-value=0.054 Score=53.11 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 310
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.78 E-value=0.053 Score=50.30 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|.+|+-+|..|++.|.+|+++++.+++-.
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 4699999999999999999999999999999988754
No 311
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.76 E-value=0.052 Score=50.67 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=31.6
Q ss_pred CCCCCCcccEEEECCChhHHHHHHHHhhCC----CeEEEEccCC
Q 014883 16 PPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (416)
Q Consensus 16 ~~~~~~~~DViIIGaGl~GL~aA~~La~~G----~~V~vlE~~~ 55 (416)
+.+++....|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 16 ~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 16 ENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred chhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 345565668999999999999999999999 8999999875
No 312
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.74 E-value=0.059 Score=53.93 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999987653
No 313
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.66 E-value=0.12 Score=49.11 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
++||||||||++||++|+.|+++|++|+|+|+++..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999988766
No 314
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.64 E-value=0.065 Score=47.08 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
+.....|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 344578999999999999999999999999999874
No 315
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.63 E-value=0.091 Score=50.00 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEe---CCCcEEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l---~~G~~i~Ad~VI~ 332 (416)
..+.+.|.+.++..|++|+++++|++|..+ ++++.+|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 367788888888899999999999999987 777666776 3566899999993
No 316
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.58 E-value=0.064 Score=52.88 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 4799999999999999999999999999999998764
No 317
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.53 E-value=0.062 Score=50.65 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
-.|+|||+|.+|+-+|..|++.|.+|+++++++++.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 3799999999999999999999999999999987654
No 318
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.51 E-value=0.068 Score=49.11 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
+..|.|||+|.-|..-|..|+ +|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 468999999999999999999 999999999875
No 319
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.43 E-value=0.063 Score=52.40 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.|||+|..|+..|..|+++|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 320
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.42 E-value=0.17 Score=50.26 Aligned_cols=35 Identities=11% Similarity=0.188 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~ 56 (416)
.+||||||||++||++|+.|++ +|++|+|+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3699999999999999999999 9999999999864
No 321
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.40 E-value=0.078 Score=53.83 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 36999999999999999999999999999999987654
No 322
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.38 E-value=0.1 Score=47.98 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.1
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIG-aGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|.||| +|.-|.+.|..|+++|++|.+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998753
No 323
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.075 Score=50.99 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|||+|..|+.+|..|...|.+|+++|.+..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999998863
No 324
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.31 E-value=0.18 Score=50.71 Aligned_cols=45 Identities=11% Similarity=0.180 Sum_probs=34.9
Q ss_pred CCCCCCCCCCcccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCC
Q 014883 12 VPPYPPIEPTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (416)
Q Consensus 12 ~~~~~~~~~~~~DViIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~ 56 (416)
||+...+++..+||||||||++|++||+.|++ .|.+|+|||+.+.
T Consensus 15 ~~~~~~M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 15 VPRGSHMSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp ------CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred ccCCcccCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 34444443457899999999999999999999 9999999999753
No 325
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.29 E-value=0.076 Score=49.42 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
..|.|||+|..|...|..|+++|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999999 999999875
No 326
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.27 E-value=0.065 Score=54.56 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
.|+|||+|..|+-+|..|++.|.+|+++|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 6999999999999999999999999999987
No 327
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.25 E-value=0.092 Score=48.69 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
...|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998643
No 328
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.24 E-value=0.059 Score=53.91 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+++.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998875
No 329
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.22 E-value=0.045 Score=49.72 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
....|+|||+|-.|+..|..|.++|.+|+|++.+..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 456899999999999999999999999999998653
No 330
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.20 E-value=0.052 Score=53.38 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.+.|||+|+|--|...|..|+..|++|+|+|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999874
No 331
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.14 E-value=0.081 Score=52.28 Aligned_cols=34 Identities=29% Similarity=0.390 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3479999999999999999999999999999875
No 332
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=93.14 E-value=0.17 Score=51.16 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=36.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (416)
.++||||||||++|+++|+.|+++|++|+|||+++..+|.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 4689999999999999999999999999999999866653
No 333
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.12 E-value=0.079 Score=51.41 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|.|||+|.-|+..|..|++ |++|+++|.+..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 589999999999999999998 999999998743
No 334
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.12 E-value=0.089 Score=48.99 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|.-|...|..|+++|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999874
No 335
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.12 E-value=0.11 Score=48.25 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
..|.|||+|.-|.+.|..|+++|+ +|.+++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 479999999999999999999999 999999875
No 336
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.08 E-value=0.049 Score=47.78 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=31.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-EccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~v-lE~~~ 55 (416)
....|.|||+|.-|...|..|+++|++|++ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 346899999999999999999999999999 77764
No 337
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=93.03 E-value=0.18 Score=49.34 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=42.2
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeC---CCc--EEEcCEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLV 331 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~Ad~VI 331 (416)
..+.+.|.+.+...|++|++++.|++|..+ ++++++|++. +|+ +++||.||
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV 155 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVV 155 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEE
Confidence 357788888888899999999999999987 6776667654 676 79999999
No 338
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=93.02 E-value=0.23 Score=50.36 Aligned_cols=53 Identities=19% Similarity=0.274 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCC------C---------cEEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------G---------QDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~------G---------~~i~Ad~VI~ 332 (416)
..+.+.|.+.+++.|++|+++++|++|..+ +++++++|++.+ | .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~-~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFH-EDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEC-TTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 477888888888899999999999999986 257777888753 3 6899999994
No 339
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.01 E-value=0.1 Score=48.65 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
..|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 589999999999999999999999 999999874
No 340
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.00 E-value=0.086 Score=48.43 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4799999999999999999999999999999988765
No 341
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.93 E-value=0.068 Score=50.77 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998863
No 342
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.90 E-value=0.092 Score=47.99 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 689999999999999999999999999998754
No 343
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.87 E-value=0.1 Score=45.58 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..+.|||+|..|...|..|+++|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999998763
No 344
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.86 E-value=0.11 Score=48.65 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~-aA~~La~~G~~V~vlE~~~~ 56 (416)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 47999999999996 78899999999999999865
No 345
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.85 E-value=0.094 Score=48.78 Aligned_cols=33 Identities=15% Similarity=0.413 Sum_probs=29.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|--|.+.|..|+++|++|+++ ++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 357999999999999999999999999999 654
No 346
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.85 E-value=0.089 Score=51.99 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
|++.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 566799999999999999999999999999998863
No 347
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.84 E-value=0.16 Score=48.82 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~--~i~Ad~VI~ 332 (416)
..+.+.|.+.+++.|++|+.+++|++|..+. ++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEE
Confidence 4677888888888899999999999999872 4444567777888 699999993
No 348
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.82 E-value=0.096 Score=51.41 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEEccCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~ 57 (416)
..+|+|||+|..|+-+|..|.+.|. +|++++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3589999999999999999999997 59999998875
No 349
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.80 E-value=0.23 Score=48.72 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (416)
++||||||||++||+||..|++. |++|+|+|+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 46999999999999999999999 99999999999976
No 350
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.76 E-value=0.11 Score=47.16 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|.|||.-|...+..|.++|++|.++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999988753
No 351
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.74 E-value=0.23 Score=49.13 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEEc--------cCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~-~G~~V~vlE--------~~~~~GG~~~s 63 (416)
.+|||||||||.+|++||..|++ .|++|+|+| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 36899999999999999999999 999999999 47789998754
No 352
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.71 E-value=0.1 Score=48.82 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..+.|||+|--|.+.|..|+++|++|.+++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999886
No 353
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.71 E-value=0.12 Score=48.04 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~ 54 (416)
|....|.|||+|..|...|..|+++|+ +|.++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 445689999999999999999999999 99999997
No 354
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.70 E-value=0.069 Score=49.10 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|--|.+.|..|+++|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999873
No 355
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.70 E-value=0.1 Score=47.83 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
..|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 47999999999999999999999999999999887
No 356
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.68 E-value=0.11 Score=48.30 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
..|.|||+|-.|...|..|+++|+ +|.++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999874
No 357
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.67 E-value=0.25 Score=48.95 Aligned_cols=45 Identities=31% Similarity=0.336 Sum_probs=40.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhh-CCCeEEEEc--------cCCCCCCcccc
Q 014883 19 EPTAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (416)
Q Consensus 19 ~~~~~DViIIGaGl~GL~aA~~La~-~G~~V~vlE--------~~~~~GG~~~s 63 (416)
|..+|||||||||.+|++||..|++ .|++|+|+| +++.+||.|..
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 3447999999999999999999999 999999999 46789998764
No 358
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=92.65 E-value=0.15 Score=48.67 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHhc-CcEEEcCCceeEEEEecCCCcEE-EEEeCCCcEEEcCEEEE
Q 014883 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~-gV~l~~G~~i~Ad~VI~ 332 (416)
..+.+.|.+.+++. |++|+++++|++|..+ ++.++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 46778888888777 8999999999999886 44432 68888898999999993
No 359
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.60 E-value=0.083 Score=50.25 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 360
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.57 E-value=0.13 Score=47.58 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||.|.-|...|..|+++|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 361
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.56 E-value=0.052 Score=48.01 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..|.|||+|.-|.+.|..|+++|++|..+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 47999999999999999999999999999985
No 362
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.55 E-value=0.094 Score=51.64 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (416)
..|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999863
No 363
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.51 E-value=0.11 Score=50.29 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|||||.|-.|...|..|.+.|++|+|+|.+..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999853
No 364
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.48 E-value=0.27 Score=48.46 Aligned_cols=42 Identities=31% Similarity=0.296 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcccc
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 63 (416)
.+|||||||||++||+||..|++.|++|+|+|+ +.+||.|..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 369999999999999999999999999999999 789998764
No 365
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.46 E-value=0.12 Score=47.79 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+++++++++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4799999999999999999999999999999988743
No 366
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.34 E-value=0.13 Score=50.83 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 369999999999999999999999999999864
No 367
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.32 E-value=0.069 Score=43.24 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|..|...|..|++.|.+|.+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999999863
No 368
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.29 E-value=0.093 Score=47.96 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 689999999999999999999999999998754
No 369
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.29 E-value=0.35 Score=47.85 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEEccCCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (416)
+..+||||||||++|++||..|+++ |.+|+|+|++++++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 5579999999999999999999887 99999999998775
No 370
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.24 E-value=0.14 Score=47.81 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
..|.|||||..|...|..|+++|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 489999999999999999999999 999999875
No 371
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.23 E-value=0.12 Score=50.21 Aligned_cols=34 Identities=29% Similarity=0.264 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
-..-|||.|.-|+..|..|+++|++|+++|.+..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3678999999999999999999999999998754
No 372
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.23 E-value=0.13 Score=44.43 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.5
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIG-aGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999998763
No 373
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.22 E-value=0.14 Score=51.17 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
-.++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999985
No 374
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.20 E-value=0.13 Score=47.37 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999998874
No 375
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.16 E-value=0.14 Score=50.51 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
+.+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 376
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.16 E-value=0.13 Score=47.16 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999998864
No 377
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.07 E-value=0.1 Score=48.64 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEcc
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~ 53 (416)
.|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 378
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=92.07 E-value=0.31 Score=48.30 Aligned_cols=39 Identities=38% Similarity=0.497 Sum_probs=34.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
+++||||||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999875443
No 379
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.06 E-value=0.13 Score=46.53 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|||+|.+|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 47999999999999999999999 9999998876
No 380
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.06 E-value=0.12 Score=49.87 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 381
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=92.04 E-value=0.12 Score=50.77 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHh--------------------hCCC-eEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La--------------------~~G~-~V~vlE~~~~~ 57 (416)
-.|+|||+|..|+-+|..|+ +.|. +|+|+++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 6787 79999998765
No 382
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=92.01 E-value=0.35 Score=40.35 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++.+| ++.||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 467777888888899999999 99999875 333 57887777 8999999954
No 383
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.00 E-value=0.37 Score=47.65 Aligned_cols=42 Identities=17% Similarity=0.167 Sum_probs=38.7
Q ss_pred cccEEEECCChhHHHHHHHHhhC---CCeEEEEccCCCCCCccccc
Q 014883 22 AFDLIVIGTGLPESVISAAASAS---GKSVLHLDPNPFYGSHFSSL 64 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~---G~~V~vlE~~~~~GG~~~s~ 64 (416)
+|||||||||++|++||..|++. |++|+|+|+++ +||.|..+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~ 46 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLD 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCc
Confidence 48999999999999999999999 99999999998 99977643
No 384
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=91.96 E-value=0.22 Score=50.59 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeC-CC--cEEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~-~G--~~i~Ad~VI~ 332 (416)
..+.+.|.+.++..|++++.+++|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467788888888899999999999999876 5556788876 66 5799999993
No 385
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.93 E-value=0.28 Score=47.99 Aligned_cols=53 Identities=13% Similarity=0.242 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEE-eCCCcEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~-l~~G~~i~Ad~VI~~ 333 (416)
..++.+.+.+.+++.|.+|+++++|++|..+ ++..+.|+ +.+|+ +.||.||+.
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a 263 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLA 263 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEe
Confidence 3467888888889999999999999999875 33335788 88887 999999953
No 386
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.93 E-value=0.15 Score=47.10 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
.|.|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 68999999999999999999999 999999874
No 387
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.89 E-value=0.15 Score=47.15 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|--|.+.|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999875
No 388
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.76 E-value=0.2 Score=52.10 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|+++|.+.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 389
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=91.73 E-value=0.41 Score=45.95 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.0
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEcCCceeEEEEecC--CCcEEEEEeCCCcEEEcCEEEE
Q 014883 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~--~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
..+|..-...+.+.|.+.++..|++|+++++|++|..+++ ++. +.|++.+| +++||+||+
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 3466555678889999999999999999999999986410 133 57877666 899999994
No 390
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.73 E-value=0.18 Score=47.40 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||.|.-|.+.|..|+++|++|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 391
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.73 E-value=0.15 Score=50.37 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (416)
..|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999999753
No 392
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.72 E-value=0.17 Score=47.92 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|||+|..|..+|..+.+.|++|+++|.+..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3689999999999999999999999999998753
No 393
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.68 E-value=0.098 Score=50.33 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=41.0
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEcCCcee---------EEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~---------~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
.+.+..|. ..+.++|.+.+++.|++|+.+++|+ +|..+ ++++ +|++.+| +++||.||..
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~A 231 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIVA 231 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEEC
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEEC
Confidence 33444443 5688999999999999999999999 88765 4554 7776555 8999999943
No 394
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.66 E-value=0.33 Score=48.58 Aligned_cols=38 Identities=5% Similarity=0.161 Sum_probs=34.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCeEEEEccCCCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~~ 57 (416)
+..+||||||||++||++|+.|++ .|++|+|||+.+..
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 346899999999999999999999 99999999997643
No 395
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.57 E-value=0.1 Score=49.15 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G-------~~V~vlE~~~~ 56 (416)
...|.|||+|.-|.+.|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999998765
No 396
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.53 E-value=0.15 Score=51.11 Aligned_cols=36 Identities=14% Similarity=0.008 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
-.++|||||..|+=.|..+++-|.+|+|+++...+-
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 479999999999999999999999999999865543
No 397
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=91.50 E-value=0.35 Score=48.07 Aligned_cols=51 Identities=24% Similarity=0.257 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEe--CCCc--EEEcCEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLV 331 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l--~~G~--~i~Ad~VI 331 (416)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|++ .+|+ +++||.||
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIV 165 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEE
Confidence 467788888888899999999999999987 677666654 3574 79999999
No 398
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.45 E-value=0.16 Score=48.85 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999999874
No 399
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.41 E-value=0.2 Score=49.43 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999853
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.39 E-value=0.17 Score=45.42 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCC----CeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G----~~V~vlE~~~~ 56 (416)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998765
No 401
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.37 E-value=0.45 Score=47.44 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=33.8
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCeEEEEccCCCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPFY 57 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~------------~G~~V~vlE~~~~~ 57 (416)
..+||||||||++||+||+.|++ +|++|+|+|+.+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC
Confidence 35899999999999999999999 99999999997643
No 402
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.35 E-value=0.13 Score=47.50 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CeEEEEcc
Q 014883 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDP 53 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~-----G-~~V~vlE~ 53 (416)
..|.|||+|.-|...|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999986
No 403
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.32 E-value=0.19 Score=49.49 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999998863
No 404
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.29 E-value=0.17 Score=47.11 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 47999999999999999999999 9999999985
No 405
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.22 E-value=0.2 Score=46.37 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (416)
.|.|||+|..|...|..|+++ |++|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999996 89999999975
No 406
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.18 E-value=0.25 Score=44.70 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..|+|+|+|-.|..+|..|++.|.+|+|+.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999876
No 407
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=91.12 E-value=0.46 Score=48.87 Aligned_cols=42 Identities=31% Similarity=0.318 Sum_probs=37.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
+.++||||||||++||+||+.|+++|++|+||||....||.+
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 346899999999999999999999999999999998765544
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.07 E-value=0.21 Score=47.82 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999999875
No 409
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=91.06 E-value=0.43 Score=48.38 Aligned_cols=42 Identities=29% Similarity=0.244 Sum_probs=37.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
+.++||||||||++||+||+.|+++|.+|+||||....||..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 346899999999999999999999999999999998776643
No 410
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.05 E-value=0.23 Score=46.26 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
|....|.|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 334689999999999999999999999 999999876
No 411
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.00 E-value=0.22 Score=45.10 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998864
No 412
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=90.93 E-value=0.45 Score=48.41 Aligned_cols=52 Identities=12% Similarity=0.185 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHh-cCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 014883 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (416)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (416)
..+.+.|.+.++. .|.+| +++.|+.|..+ ++++++|++.+|+++.||.||+.
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVLA 175 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVVT 175 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEEc
Confidence 4677888887777 58888 68899999886 77888999999999999999943
No 413
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.87 E-value=0.2 Score=45.26 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|.|||.-|...+..|.++|++|.++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999998864
No 414
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.84 E-value=0.21 Score=46.54 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=31.3
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 21 ~~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
....|+|.|| |.-|...+..|.++|++|.++.++..-
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 3457999998 999999999999999999999987643
No 415
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.84 E-value=0.18 Score=48.56 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=28.0
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCeEEEEc
Q 014883 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLD 52 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~-~G~~V~vlE 52 (416)
..|.|||+|.-|.+.|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999999998 599999998
No 416
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=90.78 E-value=0.12 Score=55.75 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+|||+|..|+-+|..|++.|.+|+|+|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4799999999999999999999999999999998754
No 417
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.74 E-value=0.28 Score=45.48 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=33.4
Q ss_pred CCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 15 YPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 15 ~~~~~~~~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.++-......|+|.|| |.-|...+..|+++|++|.++.++.
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4444444457999997 9999999999999999999998854
No 418
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.73 E-value=0.2 Score=44.93 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G-~~V~vlE~~~ 55 (416)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999863
No 419
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.67 E-value=0.12 Score=45.69 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..++|||+|-.|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 479999999999999999999999 99999864
No 420
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.66 E-value=0.23 Score=47.25 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
.+..|||+|||-+|..+|..|...|. +|.++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45689999999999999999999998 999999984
No 421
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.66 E-value=0.23 Score=47.08 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|+|+|-.|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 422
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=90.64 E-value=0.2 Score=45.25 Aligned_cols=51 Identities=14% Similarity=-0.063 Sum_probs=27.9
Q ss_pred CCCCcCCCCCCCCCC-----CCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 5 ESESELPVPPYPPIE-----PTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 5 ~~~~~~~~~~~~~~~-----~~~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.++++.+.++.++-. ....-|+|.|| |--|...|..|+++|++|+++.+++
T Consensus 6 ~~~~~~~~~~~~~~~m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~ 62 (269)
T 4dmm_A 6 HHHHHSSGLVPRGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASS 62 (269)
T ss_dssp ------------------CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCCcCCCccccccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 445555555533332 23334677775 6678999999999999999988753
No 423
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.64 E-value=0.23 Score=45.37 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999864
No 424
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.62 E-value=0.23 Score=47.20 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|+|+|-.|+.+|..|+..|.+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 425
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=90.54 E-value=0.46 Score=43.31 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=34.4
Q ss_pred CCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 10 ~~~~~~~~~~~~~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
++.|..++..+...-|+|.|| |.-|...|..|+++|++|+++.++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 344444444444456888875 6889999999999999999998764
No 426
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.53 E-value=0.25 Score=47.10 Aligned_cols=40 Identities=23% Similarity=0.254 Sum_probs=35.4
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC---eEEEEccCC-CCCCcc
Q 014883 22 AFDLIVIGT-GLPESVISAAASASGK---SVLHLDPNP-FYGSHF 61 (416)
Q Consensus 22 ~~DViIIGa-Gl~GL~aA~~La~~G~---~V~vlE~~~-~~GG~~ 61 (416)
...|+|||+ |..|+.|+..+..-|. +|.++|.+. .-||+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 468999999 9999999999999998 999999986 557763
No 427
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=90.50 E-value=0.44 Score=48.58 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=37.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 20 ~~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
+.++||||||||++||+||+.|+++|++|+||||....||.+
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 346899999999999999999999999999999987766643
No 428
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.49 E-value=0.31 Score=44.33 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.5
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+ |.-|...|..|+++|++|.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 37999999 9999999999999999999999764
No 429
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.48 E-value=0.34 Score=46.23 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
....|.|||+|-.|...|..+.+.|++|.+++.+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 34589999999999999999999999999998764
No 430
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.45 E-value=0.2 Score=52.30 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=33.0
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEEccCCCCCC
Q 014883 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (416)
Q Consensus 23 ~DViIIG--aGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (416)
..|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 3799998 99999999999999999999999998 654
No 431
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.44 E-value=0.24 Score=49.06 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999864
No 432
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.43 E-value=0.29 Score=41.59 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.2
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|+|| |.-|...+..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999998864
No 433
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.42 E-value=0.27 Score=44.72 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---eEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~---~V~vlE~~~ 55 (416)
...|.|||+|.-|.+.|..|+++|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999875
No 434
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.42 E-value=0.3 Score=45.44 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
....|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 34589999999999999999999998 999999875
No 435
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.36 E-value=0.25 Score=45.18 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 379999999999999999999999999998864
No 436
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.32 E-value=0.26 Score=48.67 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999863
No 437
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.30 E-value=0.29 Score=42.13 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|+|+|| |.-|...+..|.++|++|.++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4899995 9999999999999999999998874
No 438
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.25 E-value=0.22 Score=43.26 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.2
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|.|| |.-|...+..|.++|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 47999995 9999999999999999999999874
No 439
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.23 E-value=0.22 Score=46.26 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
.|.|||+|..|.+.|..|+++|+ +|.++|.+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999863
No 440
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.20 E-value=0.24 Score=48.61 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
....|+|||+|-.|...+..|.++|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3467999999999999999999999999999985
No 441
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.12 E-value=0.3 Score=45.17 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
..|.|||||..|...|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999864
No 442
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.12 E-value=0.27 Score=46.67 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~ 54 (416)
.+..|+|+|||-+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999998 89999997
No 443
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.06 E-value=0.23 Score=53.94 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-eEEEEccCCC
Q 014883 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~ 56 (416)
+|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 89999999999999999999996 9999999874
No 444
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=90.03 E-value=0.53 Score=46.64 Aligned_cols=53 Identities=19% Similarity=0.099 Sum_probs=41.7
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc---EEEcCEEE-ECC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LDP 334 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~---~i~Ad~VI-~~p 334 (416)
..+-+.|.+.+++.|++|+++++|++|+++ ++. +.|++.++. +++||.|| ++.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG 162 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDD--GAG-VTVEVRGPEGKHTLRAAYLVGCDG 162 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEE--TTE-EEEEEEETTEEEEEEESEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEc--CCe-EEEEEEcCCCCEEEEeCEEEECCC
Confidence 366777878888889999999999999987 444 457666664 79999999 553
No 445
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=90.02 E-value=0.52 Score=46.67 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCc---EEEcCEEE-ECC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LDP 334 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~---~i~Ad~VI-~~p 334 (416)
..+-+.|.+.+++.|++|+++++|++|.++ ++. +.|++.++. +++||.|| ++.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG 163 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDE--GDH-VVVEVEGPDGPRSLTTRYVVGCDG 163 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEEC--SSC-EEEEEECSSCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCE-EEEEEEcCCCcEEEEeCEEEEccC
Confidence 467777888888889999999999999987 333 457766765 79999999 553
No 446
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.95 E-value=0.28 Score=48.43 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 79999999999999999999999999999863
No 447
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.90 E-value=0.32 Score=42.09 Aligned_cols=31 Identities=32% Similarity=0.464 Sum_probs=28.9
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccC
Q 014883 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
.|+|.|| |.-|...+..|.++|++|.++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4899998 999999999999999999999876
No 448
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.89 E-value=0.32 Score=45.21 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
...|.|||+|..|++.|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999874
No 449
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=89.88 E-value=0.39 Score=49.94 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
-..|.|||||..|.-.|..++++|++|+++|.++.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 35899999999999999999999999999998753
No 450
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.84 E-value=0.3 Score=45.47 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEEccC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~ 54 (416)
...|.|||+|..|.+.|..|+..|+ +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999998 89999985
No 451
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.84 E-value=0.21 Score=47.46 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-------CeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G-------~~V~vlE~~~~ 56 (416)
..|.|||+|.-|.+.|..|+++| ++|.+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 36999999999999999999999 99999998765
No 452
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=89.83 E-value=0.35 Score=46.00 Aligned_cols=54 Identities=15% Similarity=0.144 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEe-CCCc--EEEcCEEE-ECC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLV-LDP 334 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l-~~G~--~i~Ad~VI-~~p 334 (416)
..+.+.|.+.+...|++|++++.|++|..++ ++. +.|++ .+|+ +++||.|| ++.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQ-GER-PYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTT-SSS-CEEEEEETTEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEec-CCc-eEEEEecCCcEEEEEeCEEEECCC
Confidence 4677788887878899999999999998751 222 45666 6887 79999999 443
No 453
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.75 E-value=0.32 Score=44.09 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
.|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999864
No 454
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.71 E-value=0.31 Score=43.59 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999864
No 455
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=89.70 E-value=0.62 Score=42.25 Aligned_cols=52 Identities=8% Similarity=0.052 Sum_probs=40.2
Q ss_pred chHHHHHHHHHHh-cCcEEEcCCceeEEEEecCCCcEEEEEeC---------CC-----cEEEcCEEEE
Q 014883 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~---------~G-----~~i~Ad~VI~ 332 (416)
..+.+.|.+.+.+ .|.++++++.|++|..+ ++++.+|++. +| .+++||.||.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 4666777776665 69999999999999987 6777677653 32 5799999994
No 456
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.70 E-value=0.28 Score=43.84 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (416)
...|+|||+|-.|..+|..|+++|. +++++|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999997 899999863
No 457
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.66 E-value=0.38 Score=43.86 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=31.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCCCC
Q 014883 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFYG 58 (416)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (416)
.|+|.|| |+-|...+..|.++|++|.++-+++..+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~ 37 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG 37 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC
Confidence 5899998 9999999999999999999998876543
No 458
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.63 E-value=0.22 Score=51.70 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|++|+++|.+.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 459
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=89.60 E-value=0.53 Score=48.05 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHh-cCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 014883 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (416)
..+.+.|.+.++. .|.+| +++.|+.|..+ ++++++|++.+|.+++||.||+
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 3577888887777 68888 68899999886 7788899988898999999994
No 460
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.53 E-value=0.32 Score=46.37 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|||+|-.|+.+|..|...|.+|++++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 461
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.48 E-value=0.39 Score=44.48 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=34.3
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCeEEEEccC--------CCCCCcccc
Q 014883 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN--------PFYGSHFSS 63 (416)
Q Consensus 21 ~~~DViIIGaG-l~GL~aA~~La~~G~~V~vlE~~--------~~~GG~~~s 63 (416)
....|+|||+| +.|..+|..|...|.+|+|++++ ..+++..++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~ 227 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHH 227 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccc
Confidence 34689999999 67999999999999999988554 566665444
No 462
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.47 E-value=0.27 Score=50.95 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.4
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEEccCCCCCCcc
Q 014883 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIG--aGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (416)
.+|+||| +|..|+-+|..|++.|.+|+++++.+++....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 3599999 99999999999999999999999999887654
No 463
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.45 E-value=0.28 Score=45.29 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G--~~V~vlE~~~ 55 (416)
.|.|||+|..|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 7999999864
No 464
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.44 E-value=0.33 Score=48.67 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 4799999999999999999999999999998654
No 465
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.32 E-value=0.31 Score=44.13 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|+|+|+|-.|..+|..|++.|.+|+|+.++.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999998763
No 466
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.25 E-value=0.4 Score=43.31 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|+|||+|-+|.++|..|++.|.+|.|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998764
No 467
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.23 E-value=0.28 Score=45.08 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.4
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
.|-+||-|.-|...|..|.++|++|++++++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 699999999999999999999999999998654
No 468
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.18 E-value=0.32 Score=44.12 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.|.|||+|.-|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999864
No 469
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.15 E-value=0.45 Score=43.72 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~-~V~vlE~~ 54 (416)
..|+|||+|-.|..+|..|++.|. +|+|+.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 479999999999999999999997 99999876
No 470
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.10 E-value=0.27 Score=44.80 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|..|...|..|+++|++|.+++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 369999999999999999999999999998 54
No 471
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.03 E-value=0.57 Score=42.80 Aligned_cols=34 Identities=21% Similarity=0.102 Sum_probs=29.1
Q ss_pred cccEEEECCC---hhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTG---LPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaG---l~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..-|+|.||+ --|...|..|+++|++|+++.++.
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3468899985 678999999999999999998874
No 472
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.98 E-value=0.33 Score=43.59 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~-V~vlE~~~ 55 (416)
..|.|||+|..|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 89998764
No 473
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.89 E-value=0.39 Score=44.97 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
..|.|||+|.-|.+.|..|+++|++|++.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 369999999999999999999999999999875
No 474
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.79 E-value=0.34 Score=47.46 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHHhhC--------------------C-CeEEEEccCCCCCCcc
Q 014883 23 FDLIVIGTGLPESVISAAASAS--------------------G-KSVLHLDPNPFYGSHF 61 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--------------------G-~~V~vlE~~~~~GG~~ 61 (416)
-.|+|||+|..|+-+|..|++. | .+|+++++++.+-...
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f 207 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAF 207 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhcc
Confidence 4799999999999999999974 6 5999999998765443
No 475
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.70 E-value=0.4 Score=42.94 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=30.0
Q ss_pred CCcccEEEECC---ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 20 PTAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 20 ~~~~DViIIGa---Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
....-|+|.|| |--|...|..|+++|++|+++.+++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 34457899996 4678999999999999999998763
No 476
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.60 E-value=0.37 Score=43.16 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=27.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEcc
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~ 53 (416)
.|.|||+|.-|...|..|+++|++|.++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 588999999999999999999999999765
No 477
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=88.60 E-value=0.46 Score=42.19 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=28.7
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 24 DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
-|+|.|| |--|...|..|+++|++|+++.++..
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5888886 67899999999999999999998754
No 478
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.56 E-value=0.44 Score=42.27 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC----eEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~----~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999874
No 479
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.52 E-value=0.35 Score=44.00 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEEccCC
Q 014883 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (416)
..|.|||+|.-|...|..|+++ |++|.+++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4799999999999999999998 68999998763
No 480
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=88.41 E-value=0.39 Score=46.90 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..|+|+|+|..|...|..|++.|++|.+++++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 46999999999999999999999999999875
No 481
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.31 E-value=0.92 Score=41.96 Aligned_cols=50 Identities=8% Similarity=-0.033 Sum_probs=40.4
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEE-EEeCCCcEEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKG-VRLASGQDILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~g-V~l~~G~~i~Ad~VI~ 332 (416)
..+.+.+.+.++..|.++++++.|++|..+ ++. +. |++.+| ++.+|+||+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~-~~~v~~~~g-~~~~d~vV~ 126 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF--GER-LRVVARDGR-QWLARAVIS 126 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE--TTE-EEEEETTSC-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC--CCc-EEEEEeCCC-EEEeCEEEE
Confidence 466677777788899999999999999886 454 45 887666 899999994
No 482
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=88.22 E-value=0.5 Score=46.86 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHHhcC-cEEEcCCceeEEEEecCCC-cEEEEEeC--CC-----cEEEcCEEEEC
Q 014883 278 QGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSG-SYKGVRLA--SG-----QDILSHKLVLD 333 (416)
Q Consensus 278 ~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g-~~~gV~l~--~G-----~~i~Ad~VI~~ 333 (416)
-...+.++.+.+...| .+|++++.|++|+.++ ++ ++++|++. +| .+++|+.||++
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~-~g~~~~gV~~~~~~g~~~~~~~v~A~~VIla 283 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTK-DGGYALTVEQKDTDGKLLATKEISCRYLFLG 283 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECT-TSSEEEEEEEECTTCCEEEEEEEEEEEEEEC
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECC-CCCEEEEEEEeCCCCccceeEEEeeCEEEEc
Confidence 4444555556566665 8999999999999872 34 78899874 56 36899998854
No 483
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=88.18 E-value=0.75 Score=46.71 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHhcC-cEEEcCCceeEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 014883 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (416)
Q Consensus 279 ~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (416)
..|.++|.+.+...| .+|+.++.|++|..+ ++++++|.. .+|+ +++|+.||+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 368888888888888 999999999999987 777777753 4676 689999994
No 484
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.18 E-value=0.39 Score=43.49 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
...|+|||+|-.|.+.|..|++.|.+|.+++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 347999999999999999999999999999886
No 485
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.16 E-value=0.65 Score=42.42 Aligned_cols=35 Identities=9% Similarity=0.084 Sum_probs=30.8
Q ss_pred CCcccEEEECCC-hhHHHHHHHHhhCCCeEEEEccC
Q 014883 20 PTAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 20 ~~~~DViIIGaG-l~GL~aA~~La~~G~~V~vlE~~ 54 (416)
....+|+|||+| +.|.-+|..|.+.|.+|+++.++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 345689999999 68999999999999999999754
No 486
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.06 E-value=0.47 Score=43.54 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999864
No 487
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.94 E-value=0.59 Score=45.81 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|+|+|+|-.|..+|..|+..|.+|++.|.++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4579999999999999999999999999999864
No 488
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=87.73 E-value=0.53 Score=43.80 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=30.5
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|+|.|| |.-|...+..|.++|++|.++.++.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357999998 9999999999999999999998753
No 489
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.69 E-value=0.49 Score=43.90 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=30.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
....|+|||+|..|.+.|..|+..|. .|.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999995 899999763
No 490
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=87.67 E-value=0.4 Score=47.49 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHH-HHHHHhhCCCeEEEEccCCC
Q 014883 22 AFDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 22 ~~DViIIGaGl~GL~-aA~~La~~G~~V~vlE~~~~ 56 (416)
...|.|||.|-+|++ +|..|.+.|++|.+.|.+..
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 457999999999997 69999999999999998753
No 491
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.63 E-value=0.72 Score=42.12 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=30.4
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 21 ~~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...+|+|||. |+.|..+|..|.+.|..|+++.++.
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3468999996 5689999999999999999998753
No 492
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.61 E-value=0.54 Score=42.20 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
.+.|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998763
No 493
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.60 E-value=0.5 Score=47.58 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
-.++|||+|--|...|..|.+.|++|+++|++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5899999999999999999999999999999976
No 494
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=87.54 E-value=0.52 Score=43.98 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=30.9
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|+|.|| |.-|...+..|.+.|++|.++.++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 457999998 9999999999999999999999875
No 495
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.54 E-value=0.54 Score=43.02 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEEccCC
Q 014883 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (416)
Q Consensus 22 ~~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (416)
...|.|||+|-.|..+|..|+..|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 496
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.52 E-value=0.57 Score=42.69 Aligned_cols=31 Identities=6% Similarity=0.263 Sum_probs=28.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (416)
..++|+|+|-.|.+.|..|++.| +|+++.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999875
No 497
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.51 E-value=0.46 Score=43.57 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEEccCC
Q 014883 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (416)
Q Consensus 24 DViIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (416)
.|.|||+|..|.+.|..|++.|+ +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 68999999999999999999998 999999865
No 498
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.45 E-value=0.76 Score=43.87 Aligned_cols=51 Identities=16% Similarity=0.079 Sum_probs=40.3
Q ss_pred chHHHHHHHHHHhcCcEEEcCCceeEEEEecCCCcEEEEEeCCCcEEEcCEEE-ECC
Q 014883 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV-LDP 334 (416)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI-~~p 334 (416)
..|-+.|.+.+.. ++|+++++|++|..+ ++. +.|++.+|++++||.|| ++.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~--~~~-v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED--ADG-VTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECCC
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec--CCc-EEEEEcCCCEEeeCEEEECCC
Confidence 4566777776655 889999999999987 444 56888899999999999 443
No 499
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=87.39 E-value=0.59 Score=43.26 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEEccCCC
Q 014883 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (416)
Q Consensus 23 ~DViIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~ 56 (416)
..|+|.|| |.-|...+..|+++|++|.++.++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 46899998 99999999999999999999998754
No 500
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=87.35 E-value=0.62 Score=44.44 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEEccCCCC
Q 014883 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (416)
Q Consensus 23 ~DViIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (416)
..++|+|||.-+...|..++..|++|+|+|.++.+
T Consensus 205 ~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 205 PRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 58999999999999999999999999999998753
Done!