Query 014884
Match_columns 416
No_of_seqs 399 out of 2891
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 09:26:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014884.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014884hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 8.8E-87 1.9E-91 644.3 32.1 320 79-416 1-334 (371)
2 PRK14296 chaperone protein Dna 100.0 3.7E-78 8E-83 600.6 32.5 325 81-416 3-345 (372)
3 PRK14288 chaperone protein Dna 100.0 9.7E-77 2.1E-81 590.4 31.7 316 81-416 2-329 (369)
4 PRK14279 chaperone protein Dna 100.0 2.8E-76 6.1E-81 590.9 32.8 335 80-416 7-362 (392)
5 PRK14286 chaperone protein Dna 100.0 1.6E-75 3.6E-80 582.1 32.6 323 81-416 3-341 (372)
6 PRK14298 chaperone protein Dna 100.0 8.3E-75 1.8E-79 577.5 31.2 318 81-416 4-335 (377)
7 PRK14284 chaperone protein Dna 100.0 1.8E-74 3.9E-79 578.7 32.4 332 82-416 1-350 (391)
8 PRK14277 chaperone protein Dna 100.0 2.5E-74 5.4E-79 576.8 33.1 330 81-416 4-349 (386)
9 PRK14285 chaperone protein Dna 100.0 3.2E-74 7E-79 571.5 33.0 324 81-416 2-337 (365)
10 PTZ00037 DnaJ_C chaperone prot 100.0 1.6E-74 3.4E-79 579.7 30.2 309 76-415 22-347 (421)
11 PRK14295 chaperone protein Dna 100.0 5.4E-74 1.2E-78 573.9 33.7 333 80-416 7-356 (389)
12 PRK14278 chaperone protein Dna 100.0 6.8E-74 1.5E-78 571.7 33.2 315 82-416 3-334 (378)
13 PRK14301 chaperone protein Dna 100.0 6E-74 1.3E-78 571.1 32.5 320 81-416 3-334 (373)
14 PRK14282 chaperone protein Dna 100.0 7.8E-74 1.7E-78 570.4 33.3 326 81-416 3-347 (369)
15 PRK14287 chaperone protein Dna 100.0 7E-74 1.5E-78 570.3 32.5 315 81-416 3-332 (371)
16 PRK14276 chaperone protein Dna 100.0 6.2E-74 1.3E-78 572.8 32.3 323 81-416 3-340 (380)
17 PRK14294 chaperone protein Dna 100.0 1.1E-73 2.5E-78 568.7 32.7 319 81-416 3-334 (366)
18 PRK14280 chaperone protein Dna 100.0 1.5E-73 3.2E-78 569.3 32.8 320 81-416 3-337 (376)
19 PRK14297 chaperone protein Dna 100.0 1.3E-73 2.8E-78 570.9 32.4 323 81-416 3-342 (380)
20 PRK10767 chaperone protein Dna 100.0 2.1E-73 4.6E-78 568.5 33.0 320 81-416 3-332 (371)
21 PRK14281 chaperone protein Dna 100.0 7.5E-73 1.6E-77 567.6 32.0 331 81-416 2-356 (397)
22 PRK14291 chaperone protein Dna 100.0 4.1E-72 9E-77 560.0 32.0 326 81-416 2-346 (382)
23 PRK14300 chaperone protein Dna 100.0 1.7E-71 3.6E-76 553.8 32.5 322 82-416 3-336 (372)
24 TIGR02349 DnaJ_bact chaperone 100.0 3E-71 6.6E-76 550.3 32.1 320 83-416 1-337 (354)
25 PRK14283 chaperone protein Dna 100.0 3.7E-71 8E-76 552.8 31.9 326 80-416 3-340 (378)
26 PRK14290 chaperone protein Dna 100.0 2.1E-70 4.6E-75 545.0 32.3 315 82-416 3-340 (365)
27 PRK14289 chaperone protein Dna 100.0 1.4E-69 2.9E-74 543.4 32.1 332 81-416 4-348 (386)
28 PRK14293 chaperone protein Dna 100.0 1.5E-69 3.3E-74 540.5 31.6 316 81-416 2-338 (374)
29 PRK14292 chaperone protein Dna 100.0 9.8E-68 2.1E-72 527.7 31.3 313 82-416 2-332 (371)
30 KOG0712 Molecular chaperone (D 100.0 5.4E-65 1.2E-69 486.0 22.5 308 81-416 3-324 (337)
31 PRK14299 chaperone protein Dna 100.0 1.5E-55 3.3E-60 425.7 28.0 253 81-416 3-270 (291)
32 PRK10266 curved DNA-binding pr 100.0 4.7E-54 1E-58 418.4 29.5 268 81-416 3-277 (306)
33 KOG0713 Molecular chaperone (D 100.0 4.8E-43 1E-47 330.8 8.5 307 79-415 13-322 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 7.7E-41 1.7E-45 343.0 24.3 155 204-413 658-812 (871)
35 KOG0715 Molecular chaperone (D 100.0 8.3E-40 1.8E-44 313.3 14.0 241 81-357 42-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 4.7E-22 1E-26 192.5 14.5 264 81-396 2-305 (306)
37 KOG0716 Molecular chaperone (D 99.8 1E-19 2.2E-24 167.3 5.2 72 81-152 30-101 (279)
38 PF01556 CTDII: DnaJ C termina 99.8 1.4E-18 3E-23 136.0 7.1 71 346-416 1-72 (81)
39 COG2214 CbpA DnaJ-class molecu 99.7 1.6E-17 3.4E-22 153.9 13.3 68 80-147 4-72 (237)
40 KOG0691 Molecular chaperone (D 99.7 2.1E-18 4.5E-23 164.3 6.4 73 81-153 4-76 (296)
41 PF00226 DnaJ: DnaJ domain; I 99.7 3.4E-18 7.4E-23 127.7 6.0 63 83-145 1-64 (64)
42 KOG0718 Molecular chaperone (D 99.7 3.4E-18 7.5E-23 167.0 5.8 75 80-154 7-84 (546)
43 KOG0717 Molecular chaperone (D 99.7 1.3E-17 2.7E-22 163.1 5.3 71 79-149 5-76 (508)
44 PTZ00341 Ring-infected erythro 99.7 3.1E-17 6.7E-22 173.5 7.8 74 79-153 570-643 (1136)
45 KOG0719 Molecular chaperone (D 99.7 7.4E-17 1.6E-21 145.0 6.0 70 80-149 12-83 (264)
46 smart00271 DnaJ DnaJ molecular 99.6 2.9E-16 6.3E-21 115.6 6.2 59 82-140 1-60 (60)
47 KOG0624 dsRNA-activated protei 99.6 5E-16 1.1E-20 147.4 7.5 69 79-147 391-462 (504)
48 cd06257 DnaJ DnaJ domain or J- 99.6 9.5E-16 2.1E-20 110.7 6.3 55 83-137 1-55 (55)
49 PHA03102 Small T antigen; Revi 99.6 1.6E-15 3.5E-20 131.3 6.4 66 82-151 5-72 (153)
50 KOG0721 Molecular chaperone (D 99.6 2.9E-15 6.2E-20 133.8 6.3 71 79-149 96-166 (230)
51 COG0484 DnaJ DnaJ-class molecu 99.5 5.7E-14 1.2E-18 137.2 10.9 131 207-341 135-337 (371)
52 PRK05014 hscB co-chaperone Hsc 99.5 3.2E-14 6.9E-19 126.8 6.7 66 82-147 1-73 (171)
53 PRK01356 hscB co-chaperone Hsc 99.5 4.3E-14 9.4E-19 125.1 6.3 67 82-148 2-73 (166)
54 PRK03578 hscB co-chaperone Hsc 99.5 7.2E-14 1.6E-18 124.8 7.1 67 81-147 5-78 (176)
55 PRK00294 hscB co-chaperone Hsc 99.5 8.2E-14 1.8E-18 123.9 7.3 69 80-148 2-77 (173)
56 PRK14282 chaperone protein Dna 99.5 1.4E-13 3E-18 137.8 9.8 140 207-350 145-359 (369)
57 PRK14290 chaperone protein Dna 99.4 3.6E-13 7.9E-18 134.5 9.8 120 228-351 164-353 (365)
58 PRK14294 chaperone protein Dna 99.4 5.9E-13 1.3E-17 133.1 9.1 118 229-350 161-346 (366)
59 PRK14298 chaperone protein Dna 99.4 5.3E-13 1.1E-17 133.7 8.6 120 228-351 157-348 (377)
60 PRK14285 chaperone protein Dna 99.4 9.3E-13 2E-17 131.5 9.1 138 207-348 139-347 (365)
61 KOG0550 Molecular chaperone (D 99.4 2.4E-13 5.3E-18 132.1 4.7 69 79-147 370-439 (486)
62 PRK10767 chaperone protein Dna 99.4 1.2E-12 2.5E-17 131.3 9.0 140 208-351 136-345 (371)
63 KOG0720 Molecular chaperone (D 99.4 4.9E-13 1.1E-17 131.3 5.1 67 81-148 234-300 (490)
64 PTZ00100 DnaJ chaperone protei 99.4 8.4E-13 1.8E-17 108.5 5.7 54 79-136 62-115 (116)
65 KOG0722 Molecular chaperone (D 99.4 2.5E-13 5.5E-18 123.6 2.7 67 81-148 32-98 (329)
66 PRK14301 chaperone protein Dna 99.3 2.6E-12 5.7E-17 128.6 9.0 136 207-346 137-342 (373)
67 PRK14300 chaperone protein Dna 99.3 9.8E-12 2.1E-16 124.5 12.0 110 228-341 161-339 (372)
68 PRK14284 chaperone protein Dna 99.3 4.3E-12 9.4E-17 127.9 9.0 116 228-347 174-359 (391)
69 PRK14287 chaperone protein Dna 99.3 3.7E-12 8E-17 127.5 8.2 116 228-347 154-341 (371)
70 PRK14288 chaperone protein Dna 99.3 1.8E-11 3.9E-16 122.4 12.4 112 228-343 155-334 (369)
71 TIGR02349 DnaJ_bact chaperone 99.3 6.3E-12 1.4E-16 125.4 8.2 114 229-346 160-345 (354)
72 PRK14278 chaperone protein Dna 99.3 1.9E-11 4.1E-16 122.6 11.5 127 207-337 132-333 (378)
73 PRK14279 chaperone protein Dna 99.3 2.8E-11 6E-16 122.0 11.8 127 208-339 167-363 (392)
74 PRK14281 chaperone protein Dna 99.3 3.3E-11 7.1E-16 121.7 11.8 107 228-338 178-356 (397)
75 PRK14280 chaperone protein Dna 99.3 3.5E-11 7.5E-16 120.7 11.8 108 228-339 159-338 (376)
76 PRK14276 chaperone protein Dna 99.3 2.6E-11 5.6E-16 121.8 10.7 107 229-339 163-341 (380)
77 PRK09430 djlA Dna-J like membr 99.3 7.4E-12 1.6E-16 119.5 6.4 59 79-137 197-262 (267)
78 PRK14286 chaperone protein Dna 99.2 1.7E-11 3.6E-16 122.8 8.9 130 208-341 144-344 (372)
79 PRK14293 chaperone protein Dna 99.2 2.2E-11 4.7E-16 122.2 8.7 118 229-350 160-350 (374)
80 PRK14297 chaperone protein Dna 99.2 5.8E-11 1.3E-15 119.4 11.8 106 229-338 165-342 (380)
81 PRK14292 chaperone protein Dna 99.2 5.7E-11 1.2E-15 119.1 11.3 113 228-344 156-338 (371)
82 PRK14289 chaperone protein Dna 99.2 4.1E-11 8.8E-16 120.8 10.2 126 207-336 147-346 (386)
83 PRK14295 chaperone protein Dna 99.2 6.3E-11 1.4E-15 119.3 11.1 125 208-337 160-355 (389)
84 PRK14277 chaperone protein Dna 99.2 9E-11 2E-15 118.2 11.9 106 228-337 171-348 (386)
85 PRK14291 chaperone protein Dna 99.2 7.5E-11 1.6E-15 118.6 11.0 126 207-337 149-345 (382)
86 PRK14296 chaperone protein Dna 99.2 8.3E-11 1.8E-15 117.7 11.0 128 207-338 142-345 (372)
87 PHA02624 large T antigen; Prov 99.2 1.6E-11 3.4E-16 126.7 5.5 60 81-144 10-71 (647)
88 PRK14283 chaperone protein Dna 99.2 1.3E-10 2.7E-15 116.9 11.3 105 228-336 162-338 (378)
89 PRK01773 hscB co-chaperone Hsc 99.2 4.1E-11 8.9E-16 106.7 6.8 67 82-148 2-75 (173)
90 PTZ00037 DnaJ_C chaperone prot 99.1 1.8E-10 3.9E-15 116.6 10.9 108 228-337 165-347 (421)
91 PF00684 DnaJ_CXXCXGXG: DnaJ c 99.1 4.1E-11 8.9E-16 89.7 2.2 57 232-288 1-66 (66)
92 COG5407 SEC63 Preprotein trans 99.1 9.3E-11 2E-15 114.8 5.0 70 81-150 97-171 (610)
93 TIGR00714 hscB Fe-S protein as 99.0 3.1E-10 6.7E-15 99.8 6.2 57 93-149 2-63 (157)
94 KOG1150 Predicted molecular ch 98.9 2.2E-09 4.8E-14 94.7 5.1 66 81-146 52-118 (250)
95 PRK14299 chaperone protein Dna 98.8 1.5E-08 3.2E-13 98.4 9.2 66 340-413 125-191 (291)
96 COG5269 ZUO1 Ribosome-associat 98.7 9.4E-09 2E-13 94.8 4.1 73 77-149 38-115 (379)
97 PRK10266 curved DNA-binding pr 98.7 5.2E-08 1.1E-12 95.3 8.9 71 342-413 115-199 (306)
98 PF01556 CTDII: DnaJ C termina 98.6 5.8E-08 1.3E-12 75.8 5.7 45 294-338 27-72 (81)
99 PLN03165 chaperone protein dna 98.3 3.1E-07 6.8E-12 75.2 3.0 56 228-292 40-100 (111)
100 KOG1789 Endocytosis protein RM 98.3 6.9E-07 1.5E-11 95.5 5.8 58 77-137 1276-1337(2235)
101 KOG0568 Molecular chaperone (D 98.3 9.7E-07 2.1E-11 79.8 4.7 56 82-138 47-103 (342)
102 KOG0712 Molecular chaperone (D 98.3 1.6E-06 3.5E-11 84.2 6.5 42 295-337 280-323 (337)
103 TIGR02642 phage_xxxx uncharact 98.1 2.6E-06 5.6E-11 76.3 4.0 48 265-313 100-149 (186)
104 KOG0723 Molecular chaperone (D 98.0 9.8E-06 2.1E-10 64.7 4.6 59 76-138 50-108 (112)
105 TIGR03835 termin_org_DnaJ term 97.9 3.7E-05 8E-10 81.3 9.5 70 82-152 2-71 (871)
106 KOG3192 Mitochondrial J-type c 97.9 1.5E-05 3.2E-10 68.1 4.4 69 79-147 5-80 (168)
107 COG1107 Archaea-specific RecJ- 97.4 0.00011 2.4E-09 75.2 3.1 58 231-289 4-79 (715)
108 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.4 9.1E-05 2E-09 55.3 1.8 44 228-274 14-66 (66)
109 COG1076 DjlA DnaJ-domain-conta 96.7 0.0013 2.8E-08 59.0 3.6 69 83-151 2-77 (174)
110 KOG2813 Predicted molecular ch 96.6 0.0018 3.9E-08 61.7 3.3 31 266-299 247-277 (406)
111 PLN03165 chaperone protein dna 96.5 0.0016 3.4E-08 53.5 2.4 41 231-278 54-100 (111)
112 COG1076 DjlA DnaJ-domain-conta 96.3 0.0023 5.1E-08 57.3 2.2 54 82-135 113-173 (174)
113 COG1107 Archaea-specific RecJ- 96.1 0.0047 1E-07 63.5 3.7 46 229-277 18-81 (715)
114 TIGR02642 phage_xxxx uncharact 95.8 0.011 2.3E-07 53.3 4.3 31 247-279 100-130 (186)
115 KOG0431 Auxilin-like protein a 95.2 0.021 4.5E-07 58.7 4.5 47 89-135 395-448 (453)
116 PF03656 Pam16: Pam16; InterP 93.7 0.18 3.9E-06 42.6 5.8 60 79-142 55-114 (127)
117 KOG2813 Predicted molecular ch 93.0 0.044 9.6E-07 52.5 1.3 57 229-291 198-258 (406)
118 KOG0715 Molecular chaperone (D 90.0 0.58 1.2E-05 45.4 5.5 78 223-304 175-257 (288)
119 KOG2824 Glutaredoxin-related p 86.6 0.58 1.3E-05 44.4 3.0 22 231-258 231-252 (281)
120 PF11833 DUF3353: Protein of u 82.7 3.4 7.3E-05 37.7 6.1 38 91-136 1-38 (194)
121 PF14687 DUF4460: Domain of un 81.3 3.7 8E-05 33.9 5.3 46 92-137 4-53 (112)
122 cd03031 GRX_GRX_like Glutaredo 80.0 1.4 2.9E-05 38.4 2.4 23 230-258 100-122 (147)
123 PF13446 RPT: A repeated domai 76.5 4.4 9.5E-05 29.4 3.9 45 82-137 5-49 (62)
124 KOG0724 Zuotin and related mol 75.8 2.8 6E-05 41.5 3.6 54 94-147 4-61 (335)
125 PRK14714 DNA polymerase II lar 72.9 2.2 4.8E-05 48.5 2.2 62 219-291 658-722 (1337)
126 TIGR00630 uvra excinuclease AB 66.5 5 0.00011 45.3 3.3 32 246-277 736-772 (924)
127 smart00709 Zpr1 Duplicated dom 64.1 11 0.00024 33.2 4.3 20 295-314 81-100 (160)
128 PRK04023 DNA polymerase II lar 62.2 4 8.7E-05 45.5 1.5 64 212-288 609-673 (1121)
129 PF03833 PolC_DP2: DNA polymer 62.2 2.5 5.5E-05 46.1 0.0 49 229-289 655-703 (900)
130 KOG2824 Glutaredoxin-related p 60.5 8 0.00017 36.9 3.0 38 247-291 230-275 (281)
131 COG1198 PriA Primosomal protei 60.0 5.8 0.00013 43.4 2.2 50 229-287 435-484 (730)
132 cd03031 GRX_GRX_like Glutaredo 59.1 8.8 0.00019 33.3 2.8 37 247-290 100-145 (147)
133 PRK00349 uvrA excinuclease ABC 56.3 8.8 0.00019 43.4 2.9 30 247-276 739-773 (943)
134 TIGR00310 ZPR1_znf ZPR1 zinc f 55.5 20 0.00044 32.6 4.6 20 295-314 80-100 (192)
135 PF07709 SRR: Seven Residue Re 55.4 6.5 0.00014 19.8 0.8 13 124-136 2-14 (14)
136 PF10041 DUF2277: Uncharacteri 54.3 80 0.0017 24.1 6.7 54 83-137 4-61 (78)
137 TIGR00630 uvra excinuclease AB 53.6 5.2 0.00011 45.1 0.6 29 265-293 737-774 (924)
138 PRK14873 primosome assembly pr 53.3 9.2 0.0002 41.6 2.4 49 229-287 383-431 (665)
139 PRK00635 excinuclease ABC subu 49.4 10 0.00022 45.7 2.1 29 248-276 1609-1642(1809)
140 PF09538 FYDLN_acid: Protein o 48.9 10 0.00022 31.1 1.4 26 228-253 8-33 (108)
141 COG5552 Uncharacterized conser 47.5 64 0.0014 24.4 5.3 33 82-114 3-35 (88)
142 PF04246 RseC_MucC: Positive r 47.1 29 0.00063 29.4 4.1 23 293-315 41-63 (135)
143 PRK12336 translation initiatio 45.7 47 0.001 30.4 5.5 34 295-329 150-184 (201)
144 TIGR00595 priA primosomal prot 43.8 15 0.00034 38.5 2.3 50 229-287 213-262 (505)
145 PF14353 CpXC: CpXC protein 43.3 20 0.00044 30.0 2.5 13 264-276 38-50 (128)
146 PF07092 DUF1356: Protein of u 43.1 12 0.00026 35.0 1.2 10 404-413 202-211 (238)
147 PRK00349 uvrA excinuclease ABC 41.0 18 0.00038 41.1 2.3 31 266-296 740-779 (943)
148 PRK05580 primosome assembly pr 40.7 15 0.00033 40.1 1.7 50 229-287 381-430 (679)
149 PRK14051 negative regulator Gr 40.2 96 0.0021 25.3 5.7 70 326-396 48-119 (123)
150 TIGR00340 zpr1_rel ZPR1-relate 38.8 43 0.00094 29.6 3.9 20 295-314 78-98 (163)
151 TIGR02300 FYDLN_acid conserved 38.5 19 0.00041 30.3 1.5 27 228-254 8-34 (129)
152 PF08792 A2L_zn_ribbon: A2L zi 38.3 20 0.00044 22.7 1.3 11 248-258 5-15 (33)
153 COG0178 UvrA Excinuclease ATPa 37.3 20 0.00043 39.6 1.8 28 265-292 731-767 (935)
154 PRK03564 formate dehydrogenase 36.7 35 0.00076 33.4 3.3 10 229-238 187-196 (309)
155 PF12434 Malate_DH: Malate deh 36.5 40 0.00086 20.3 2.2 17 96-112 10-26 (28)
156 PRK14559 putative protein seri 35.9 20 0.00042 38.9 1.6 49 230-287 2-50 (645)
157 PRK00564 hypA hydrogenase nick 33.5 62 0.0014 26.8 3.9 30 227-256 69-98 (117)
158 KOG0315 G-protein beta subunit 33.3 41 0.00088 31.9 3.0 40 350-389 19-65 (311)
159 COG0178 UvrA Excinuclease ATPa 31.9 34 0.00074 37.8 2.6 40 247-286 731-775 (935)
160 PRK12380 hydrogenase nickel in 31.1 59 0.0013 26.8 3.3 37 219-256 59-96 (113)
161 smart00276 GLECT Galectin. Gal 30.2 56 0.0012 27.3 3.2 41 375-415 3-48 (128)
162 PF07092 DUF1356: Protein of u 30.0 26 0.00056 32.9 1.1 10 248-257 40-49 (238)
163 PF09862 DUF2089: Protein of u 29.8 32 0.00069 28.4 1.5 20 267-286 1-20 (113)
164 KOG3442 Uncharacterized conser 29.1 67 0.0014 26.9 3.2 55 82-140 59-113 (132)
165 PF07295 DUF1451: Protein of u 29.0 61 0.0013 28.1 3.2 31 246-276 112-142 (146)
166 TIGR00100 hypA hydrogenase nic 27.2 64 0.0014 26.6 2.9 11 227-237 68-78 (115)
167 PF09297 zf-NADH-PPase: NADH p 26.6 44 0.00096 20.7 1.4 23 249-271 6-28 (32)
168 COG2214 CbpA DnaJ-class molecu 25.9 1.7E+02 0.0036 25.9 5.9 65 346-413 150-215 (237)
169 PRK00635 excinuclease ABC subu 25.4 20 0.00043 43.4 -0.6 28 266-293 1609-1645(1809)
170 PRK03681 hypA hydrogenase nick 25.4 73 0.0016 26.3 3.0 19 219-237 59-78 (114)
171 PF03589 Antiterm: Antitermina 24.8 29 0.00062 27.8 0.4 12 265-276 33-44 (95)
172 COG5216 Uncharacterized conser 24.2 53 0.0011 23.7 1.6 13 208-220 30-42 (67)
173 smart00841 Elong-fact-P_C Elon 23.2 64 0.0014 23.1 1.9 20 372-391 29-48 (56)
174 PF13901 DUF4206: Domain of un 23.2 25 0.00054 32.2 -0.3 47 230-285 143-196 (202)
175 COG1326 Uncharacterized archae 23.2 4.9E+02 0.011 23.7 7.8 73 295-379 64-142 (201)
176 PF01155 HypA: Hydrogenase exp 23.1 63 0.0014 26.5 2.2 29 227-256 68-96 (113)
177 TIGR03180 UraD_2 OHCU decarbox 22.9 2.5E+02 0.0054 24.6 6.0 10 107-116 57-66 (158)
178 cd01388 SOX-TCF_HMG-box SOX-TC 22.4 1.5E+02 0.0033 21.7 4.0 42 101-147 14-55 (72)
179 PRK00398 rpoP DNA-directed RNA 22.0 76 0.0016 21.4 2.0 7 265-271 22-28 (46)
180 COG2879 Uncharacterized small 21.4 1.5E+02 0.0032 21.8 3.4 26 102-129 27-52 (65)
181 PF13719 zinc_ribbon_5: zinc-r 21.3 49 0.0011 21.3 0.9 10 230-239 3-12 (37)
182 PRK13798 putative OHCU decarbo 21.2 2.8E+02 0.006 24.5 6.0 27 107-133 67-109 (166)
183 PF03604 DNA_RNApol_7kD: DNA d 20.7 79 0.0017 19.8 1.7 7 246-252 17-23 (32)
184 TIGR01562 FdhE formate dehydro 20.3 1E+02 0.0022 30.2 3.3 16 99-114 100-115 (305)
185 cd01491 Ube1_repeat1 Ubiquitin 20.1 2.1E+02 0.0046 27.7 5.4 58 301-362 186-253 (286)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-87 Score=644.27 Aligned_cols=320 Identities=45% Similarity=0.818 Sum_probs=287.3
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~ 158 (416)
++.+|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||||||||+||++||++|..+..+..
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg-- 78 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG-- 78 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC--
Confidence 356899999999999999999999999999999999998899999999999999999999999999999887654211
Q ss_pred CCCCCCCccCCCCCCceeccccccccchhhhhhhhhcCC--------CcccCCCeEEEEEeeeeecccCcceeeeeeeee
Q 014884 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (416)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~--------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~ 230 (416)
++++ .|. .|+.+|.|+|+++|++. ...++.|+.+.|+|||+||+.|+++++.+++.+
T Consensus 79 ---~gg~-------g~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~ 143 (371)
T COG0484 79 ---FGGF-------GFG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSV 143 (371)
T ss_pred ---cCCC-------CcC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceee
Confidence 1111 111 11124567777777321 245799999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCcccccCCCcceeEEEeCC------CcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccc
Q 014884 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIPP------FTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (416)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~------~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~ 304 (416)
.|..|+|+|++.+....+|+.|+|+|++.+.. ++++|+.|+|+|++++++|.+|+|.|++...++|+|+||+|+
T Consensus 144 ~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv 223 (371)
T COG0484 144 TCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGV 223 (371)
T ss_pred ECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCC
Confidence 99999999999999999999999999875432 478999999999999999999999999999999999999999
Q ss_pred cCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCC
Q 014884 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (416)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g 384 (416)
.+|++|++.|+|+++..|+++|||||.|.|++|+.|.|+|+||+++++|++.+|+||++++||||||.++|+||+|+++|
T Consensus 224 ~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G 303 (371)
T COG0484 224 DDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTG 303 (371)
T ss_pred ccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccC
Confidence 99999999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++||+|+|||.... ..+|||||+|+|++|+
T Consensus 304 ~~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~ 334 (371)
T COG0484 304 EVFRLRGKGMPKLRS-GGRGDLYVRVKVETPK 334 (371)
T ss_pred cEEEEcCCCccccCC-CCcCCEEEEEEEEcCC
Confidence 999999999997633 2469999999999995
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.7e-78 Score=600.62 Aligned_cols=325 Identities=33% Similarity=0.646 Sum_probs=280.9
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.||++||++|+.+..... +
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~ 78 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G 78 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence 479999999999999999999999999999999997 478999999999999999999999999999876543110 0
Q ss_pred CCCCCccCCCCCCceecccc----ccccchhhhhhhhhcCC-----CcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQT----HFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~----~f~~~~~~~F~~~f~~~-----~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~ 231 (416)
...+| .+|+.+|.. .| +.|.++|+.+|++. ...+++|+++.|.|||+|+|+|+++.+.+.+.+.
T Consensus 79 ~~~~~------~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~ 151 (372)
T PRK14296 79 FSSNF------GDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTN 151 (372)
T ss_pred cCcCC------Ccccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeec
Confidence 00011 112221211 11 23557777777631 2346889999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (416)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (416)
|+.|+|+|........+|+.|+|+|.++.. +++++|+.|+|.|++++++|..|+|.|++.+.++++|.||||
T Consensus 152 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 231 (372)
T PRK14296 152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKG 231 (372)
T ss_pred cCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCC
Confidence 999999999888888999999999987532 135799999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCC-CCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCC
Q 014884 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQ 382 (416)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~-G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~ 382 (416)
+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+ |+||+++++|+|.|||+|+++.|+||||++.|+||++++
T Consensus 232 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~ 311 (372)
T PRK14296 232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSIN 311 (372)
T ss_pred CCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccC
Confidence 9999999999999987667789999999999999999995 899999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 383 ~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
||++++|+|+|||.....+.+|||||+|+|+||+
T Consensus 312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~ 345 (372)
T PRK14296 312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK 345 (372)
T ss_pred CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 9999999999999653334579999999999995
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.7e-77 Score=590.37 Aligned_cols=316 Identities=32% Similarity=0.636 Sum_probs=276.1
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||++|+.+.... .+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~ 78 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA 78 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence 469999999999999999999999999999999998778899999999999999999999999999987654210 00
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
+...|.++| +.|.++|+.+|+.. ...+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus 79 ---------~~~~~~~~f-----~~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~ 144 (369)
T PRK14288 79 ---------SQSDFSDFF-----EDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE 144 (369)
T ss_pred ---------Cccccccch-----hhHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence 001122222 12345555555421 124688999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCE
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~ 309 (416)
.|+|+|.... ...+|+.|+|+|.++.. .++++|+.|.|+|+++.++|..|+|.|++.+.++++|.||||+++|++
T Consensus 145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~ 223 (369)
T PRK14288 145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223 (369)
T ss_pred CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence 9999999765 67899999999987543 246799999999999999999999999999999999999999999999
Q ss_pred EEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEE
Q 014884 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV 388 (416)
Q Consensus 310 i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~ 388 (416)
|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||++++||++++
T Consensus 224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~ 302 (369)
T PRK14288 224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA 302 (369)
T ss_pred EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence 99999999865 568999999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 389 l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|+|+|||..+. ..+|||||+|+|.||+
T Consensus 303 i~g~G~p~~~~-~~~GDL~v~~~v~~P~ 329 (369)
T PRK14288 303 FRNEGVKHPES-SYRGSLIVELQVIYPK 329 (369)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 99999997653 3579999999999995
No 4
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-76 Score=590.94 Aligned_cols=335 Identities=36% Similarity=0.687 Sum_probs=285.8
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcc-c-
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEK-Y- 157 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~-~- 157 (416)
+.+|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.||++||++|+.+..... .
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 45799999999999999999999999999999999987788999999999999999999999999999764221110 0
Q ss_pred ---cCCCCCCCccCC--CCCCceecccccc---ccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcce
Q 014884 158 ---SAGDAEGFRYAG--DAEGFRYAYQTHF---SDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTK 222 (416)
Q Consensus 158 ---~~~~~~~~~~~~--~~~~f~~~~~~~f---~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~ 222 (416)
+.+.+.+|.+.. ....|.++|+..+ .++|.++|+.+|++. ...+++|++++|.|||+|+|+|+++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 000111221100 0112334443111 123667788777631 1347889999999999999999999
Q ss_pred eeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEE
Q 014884 223 HVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (416)
Q Consensus 223 ~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V 298 (416)
++.+++.+.|+.|+|+|........+|+.|+|+|+++.. .++++|+.|+|+|++++++|..|+|.|++.+.++++|
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V 246 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINV 246 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEE
Confidence 999999999999999999888888999999999997543 2478999999999999999999999999999999999
Q ss_pred EecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeC
Q 014884 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP 378 (416)
Q Consensus 299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip 378 (416)
.||||+++|++|+|+|+|++.+.+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+||++.|+||
T Consensus 247 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip 326 (392)
T PRK14279 247 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVP 326 (392)
T ss_pred EeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEEC
Confidence 99999999999999999999877778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 379 ~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++++|++++|+|+|||..+ ..+|||||+|+|.||+
T Consensus 327 ~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~ 362 (392)
T PRK14279 327 AGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPP 362 (392)
T ss_pred CCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCC
Confidence 99999999999999999753 3479999999999995
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-75 Score=582.12 Aligned_cols=323 Identities=33% Similarity=0.694 Sum_probs=280.9
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|+.+..... ++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~ 81 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876543110 000
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-----------CcccCCCeEEEEEeeeeecccCcceeeeeeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-----------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~ 229 (416)
...++ ..|..+| +.|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+++.
T Consensus 82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~ 150 (372)
T PRK14286 82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL 150 (372)
T ss_pred CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence 00000 0111111 23456677666521 13468899999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
+.|+.|+|+|........+|+.|+|+|+++.. .++++|+.|+|+|++++++|..|+|.|++.+.++++|.||||++
T Consensus 151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (372)
T PRK14286 151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE 230 (372)
T ss_pred ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence 99999999999888888899999999987543 24679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCC
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPG 384 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g 384 (416)
+|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||+ +.|+||+++++|
T Consensus 231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g 310 (372)
T PRK14286 231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG 310 (372)
T ss_pred CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence 9999999999999876677899999999999999999999999999999999999999999999997 899999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~ 341 (372)
T PRK14286 311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPK 341 (372)
T ss_pred cEEEECCCCCCCCCC-CCCCcEEEEEEEECCC
Confidence 999999999997643 3579999999999995
No 6
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-75 Score=577.55 Aligned_cols=318 Identities=42% Similarity=0.732 Sum_probs=278.4
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|+.+.... ++
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~-~~-- 79 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ-YS-- 79 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccc-cC--
Confidence 469999999999999999999999999999999997 47789999999999999999999999999987654311 00
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~ 234 (416)
...+|. + ..| ++|.++|+.+|++. ...++.|++++|.|||+|+|+|+++++.+++.+.|+.
T Consensus 80 ~~~~~~--~--~~~---------~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~ 146 (377)
T PRK14298 80 AEDIFR--G--ADF---------GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST 146 (377)
T ss_pred cccccc--c--CCc---------CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence 000010 0 011 12345666666531 2357889999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccC
Q 014884 235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (416)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~ 306 (416)
|+|+|........+|+.|+|+|+++.. .++.+|+.|+|+|++++++|..|+|.|++.+.++++|.||||+++
T Consensus 147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~ 226 (377)
T PRK14298 147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226 (377)
T ss_pred CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence 999999988888999999999987532 246799999999999999999999999999999999999999999
Q ss_pred CCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcE
Q 014884 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL 386 (416)
Q Consensus 307 G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~ 386 (416)
|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||++.|+||+++++|++
T Consensus 227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~ 306 (377)
T PRK14298 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSV 306 (377)
T ss_pred CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCE
Confidence 99999999999977778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 387 ~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 307 lri~g~G~p~~~~-~~~GDL~V~~~V~~P~ 335 (377)
T PRK14298 307 FRLKDKGMPRLHG-HGKGDQLVKVIVKTPT 335 (377)
T ss_pred EEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 9999999997643 3579999999999995
No 7
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-74 Score=578.69 Aligned_cols=332 Identities=36% Similarity=0.678 Sum_probs=280.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (416)
.|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+......+. .
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~-~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF-G 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc-C
Confidence 389999999999999999999999999999999998888999999999999999999999999999876532110000 0
Q ss_pred CCCCcc-CCCCCCceeccccccccchhhhhhhhhcC-----------CCcccCCCeEEEEEeeeeecccCcceeeeeeee
Q 014884 162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (416)
Q Consensus 162 ~~~~~~-~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-----------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~ 229 (416)
..+|.. ......|..+|+..|+ .+.++|+.+|++ ....++.|+++.|.|||+|+|+|+++++.+++.
T Consensus 80 ~~g~~~~~~~~~~~~~~f~~~~~-~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~ 158 (391)
T PRK14284 80 GAGMGNMEDALRTFMGAFGGEFG-GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY 158 (391)
T ss_pred CCCcCcccchhhhcccccccccc-ccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence 011110 0011122222221111 113556555542 112468899999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
+.|+.|+|+|........+|+.|+|+|.++.. .++.+|+.|+|.|++++++|..|+|.|++.+.++++|.||||+.
T Consensus 159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 238 (391)
T PRK14284 159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238 (391)
T ss_pred ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence 99999999999888888999999999987543 24679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCC--CeEEEEeCCCCCC
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKIPKGVQP 383 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ld--g~~~v~ip~g~~~ 383 (416)
+|++|+|+|+|++++.++.||||||+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+| +.++|+||+++++
T Consensus 239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~ 318 (391)
T PRK14284 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS 318 (391)
T ss_pred CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence 99999999999998878889999999999999999999999999999999999999999999999 5689999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 384 g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 319 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~ 350 (391)
T PRK14284 319 GTILKVRGQGFPNVHG-KGRGDLLVRISVETPQ 350 (391)
T ss_pred CeEEEECCCCCCCCCC-CCCCcEEEEEEEECCC
Confidence 9999999999997643 2579999999999995
No 8
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.5e-74 Score=576.76 Aligned_cols=330 Identities=41% Similarity=0.771 Sum_probs=278.4
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|+.+......+.+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 46999999999999999999999999999999999877889999999999999999999999999998766432111110
Q ss_pred CC--CCCccCCCCCCceeccccccccchhhhhhhhhcCC------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeec
Q 014884 161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (416)
Q Consensus 161 ~~--~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C 232 (416)
.. .++. ...|...+ ..|.+.|.++|+.+|++. ...+++|+++.|.|||+|+|+|+++++.+++.+.|
T Consensus 84 ~~~~~g~~----~~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C 158 (386)
T PRK14277 84 GFGQGGFG----GGGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC 158 (386)
T ss_pred CcCCCCcc----ccCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence 00 0110 00011000 011122333444333321 13478899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccc
Q 014884 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (416)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~ 304 (416)
+.|+|+|........+|+.|+|.|+++.. ...++|+.|+|+|++++++|..|+|.|++.+.++++|.||||+
T Consensus 159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 238 (386)
T PRK14277 159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI 238 (386)
T ss_pred CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence 99999999888888999999999987532 1256999999999999999999999999999999999999999
Q ss_pred cCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCC
Q 014884 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (416)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g 384 (416)
++|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|+|.||++|+++.|+||||++.|+||+++++|
T Consensus 239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g 318 (386)
T PRK14277 239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTG 318 (386)
T ss_pred cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCC
Confidence 99999999999998766677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 319 ~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~ 349 (386)
T PRK14277 319 TKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPK 349 (386)
T ss_pred CEEEECCCCCCCCCC-CCCCCEEEEEEEEeCC
Confidence 999999999997643 2579999999999995
No 9
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-74 Score=571.49 Aligned_cols=324 Identities=35% Similarity=0.678 Sum_probs=282.3
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++++.+.... .
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~----~ 77 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG----G 77 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC----C
Confidence 369999999999999999999999999999999998878899999999999999999999999999987654211 0
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
.+.++. ++.++|... | ..|+++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+++.+.|.
T Consensus 78 ~~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~ 150 (365)
T PRK14285 78 GFEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCE 150 (365)
T ss_pred CccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCC
Confidence 010110 000111111 1 23567777777631 134788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCE
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~ 309 (416)
.|+|+|.........|+.|+|+|+++.. .++++|+.|+|.|++++++|..|+|.|++.+.++++|.||||+++|++
T Consensus 151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~ 230 (365)
T PRK14285 151 SCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQ 230 (365)
T ss_pred CCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence 9999999888888899999999987653 247899999999999999999999999999999999999999999999
Q ss_pred EEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEE
Q 014884 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV 388 (416)
Q Consensus 310 i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~ 388 (416)
|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+||||+ ++|+||+++++|++++
T Consensus 231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~ir 310 (365)
T PRK14285 231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII 310 (365)
T ss_pred EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEE
Confidence 999999999876777899999999999999999999999999999999999999999999995 8999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 389 l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 311 l~GkG~p~~~~-~~~GDL~V~~~v~~P~ 337 (365)
T PRK14285 311 IKNEGMPILHT-EKFGNLILIIKIKTPK 337 (365)
T ss_pred ECCCCccCCCC-CCCCCEEEEEEEECCC
Confidence 99999997643 2469999999999994
No 10
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=1.6e-74 Score=579.75 Aligned_cols=309 Identities=30% Similarity=0.537 Sum_probs=269.1
Q ss_pred CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCc
Q 014884 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE 155 (416)
Q Consensus 76 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~ 155 (416)
+..+...|||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..+....
T Consensus 22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~ 97 (421)
T PTZ00037 22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG 97 (421)
T ss_pred cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC
Confidence 344556899999999999999999999999999999999863 4899999999999999999999999976543210
Q ss_pred cccCCCCCCCccCCCCCCceeccccccccchhhhhhhhhcC----CCcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884 156 KYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (416)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~----~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~ 231 (416)
. +. ..+.++|+.+|++ ....+++|+.+.|.|||+|+|+|+++.+.+++.+.
T Consensus 98 ---------~---~~-------------~d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~ 152 (421)
T PTZ00037 98 ---------E---QP-------------ADASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI 152 (421)
T ss_pred ---------C---CC-------------cchhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence 0 00 0122444444442 12356899999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEee--eeeeEeeCCcEEeceEEEEEEec
Q 014884 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIP 301 (416)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~Ip 301 (416)
|+.|+|+|.... ...+|+.|+|+|+++.. .++.+|+.|+|+|+++. ++|..|+|.|++.+.++++|.||
T Consensus 153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip 231 (421)
T PTZ00037 153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID 231 (421)
T ss_pred ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence 999999998544 57899999999975321 23679999999999985 89999999999999999999999
Q ss_pred ccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC
Q 014884 302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG 380 (416)
Q Consensus 302 ~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g 380 (416)
||+.+|++|+|+|+|+..+ ++.||||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||++
T Consensus 232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g 310 (421)
T PTZ00037 232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG 310 (421)
T ss_pred CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence 9999999999999999865 578999999999999999999999999999999999999999999999997 89999988
Q ss_pred --CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcC
Q 014884 381 --VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415 (416)
Q Consensus 381 --~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P 415 (416)
++||++++|+|+|||..+.+..+|||||+|+|.||
T Consensus 311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P 347 (421)
T PTZ00037 311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP 347 (421)
T ss_pred cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcC
Confidence 99999999999999976543468999999999999
No 11
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.4e-74 Score=573.93 Aligned_cols=333 Identities=36% Similarity=0.709 Sum_probs=282.1
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcc----cccCCCCCc
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE 155 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~----~~~~g~~~~ 155 (416)
+..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||+ +|+.|....
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 4579999999999999999999999999999999998778899999999999999999999999999 776554311
Q ss_pred cccCCCCCCCccCCCCCCceeccc----cccccchhhhhhhhhcC----CCcccCCCeEEEEEeeeeecccCcceeeeee
Q 014884 156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (416)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~~~~~F~~~f~~----~~~~~g~di~~~l~isl~e~~~G~~~~~~~~ 227 (416)
. ..+...+|.+ +..+.|..+++ ..|++.|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.++
T Consensus 87 ~-~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 87 P-GGGGGGGFNF-DLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred C-CCCCCCCCCc-ccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 0 0000011110 00111211100 01222355667766653 1235789999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (416)
+.+.|+.|+|+|........+|+.|+|+|++... .++.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||
T Consensus 165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G 244 (389)
T PRK14295 165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG 244 (389)
T ss_pred ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence 9999999999999988888999999999987543 246799999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCC
Q 014884 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQ 382 (416)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~ 382 (416)
+++|++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|++++|+|+|| .+.|+||++++
T Consensus 245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~ 324 (389)
T PRK14295 245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTP 324 (389)
T ss_pred CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccC
Confidence 99999999999999877777899999999999999999999999999999999999999999999999 58999999999
Q ss_pred CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 383 ~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+|++++|+|+|||..+ +.+|||||+|+|.||+
T Consensus 325 ~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~ 356 (389)
T PRK14295 325 NGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPK 356 (389)
T ss_pred CCcEEEECCCCcCCCC--CCCCCEEEEEEEECCC
Confidence 9999999999999753 3479999999999995
No 12
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.8e-74 Score=571.65 Aligned_cols=315 Identities=37% Similarity=0.678 Sum_probs=275.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (416)
.|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|++||++|+.+... + ..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~---~-~~ 77 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESA---G-GG 77 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccc---c-CC
Confidence 69999999999999999999999999999999998 5789999999999999999999999999997542110 0 00
Q ss_pred CCCCccCCCCCCceeccccccccchhhhhhhhhcCC--------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~--------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
..+|. .+| ++|+++|+.+|++. ...++.|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus 78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~ 143 (378)
T PRK14278 78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD 143 (378)
T ss_pred CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence 00110 011 12345666666521 124688999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
.|+|+|........+|+.|+|+|++... ..+++|+.|+|.|++++++|..|+|.|++.+.++++|.||||++
T Consensus 144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~ 223 (378)
T PRK14278 144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223 (378)
T ss_pred CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence 9999999888888999999999986532 12679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecC-CCeEEEEeCCCCCCC
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKIPKGVQPG 384 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~l-dg~~~v~ip~g~~~g 384 (416)
+|++|+|+|+|++.+.+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|| ++.+.|+||+++++|
T Consensus 224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g 303 (378)
T PRK14278 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG 303 (378)
T ss_pred CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence 9999999999999877778899999999999999999999999999999999999999999999 556899999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 385 ~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 304 ~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~ 334 (378)
T PRK14278 304 SVITLRGRGMPHLRS-GGRGDLHAHVEVVVPT 334 (378)
T ss_pred cEEEECCCCCCCCCC-CCCCCEEEEEEEEcCC
Confidence 999999999997643 3579999999999995
No 13
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6e-74 Score=571.10 Aligned_cols=320 Identities=43% Similarity=0.777 Sum_probs=280.1
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++++.|..+. +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~ 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence 479999999999999999999999999999999998778899999999999999999999999999987654311 1
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC--------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeec
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~--------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C 232 (416)
.+.+|. +..+.| +.|.++|+.+|+. ....+++|+++.|.|||+|+|+|+++++.+++.+.|
T Consensus 79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C 147 (373)
T PRK14301 79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC 147 (373)
T ss_pred CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence 111111 011111 1234556555541 123478899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCC
Q 014884 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (416)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~ 308 (416)
+.|+|+|........+|+.|+|+|++... .++.+|+.|+|.|++++..|..|+|.|++.+.++++|.||||+++|+
T Consensus 148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 227 (373)
T PRK14301 148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS 227 (373)
T ss_pred CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence 99999999888778899999999987543 24789999999999999999999999999999999999999999999
Q ss_pred EEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEE
Q 014884 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (416)
Q Consensus 309 ~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~ 388 (416)
+|+|+|+|++...+..+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+++++|++++
T Consensus 228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~r 307 (373)
T PRK14301 228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR 307 (373)
T ss_pred EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEE
Confidence 99999999987767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 389 l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|+|+|||..+. ..+|||||+|+|.||+
T Consensus 308 i~g~G~p~~~~-~~~GDL~I~~~V~~P~ 334 (373)
T PRK14301 308 LRGKGLPYLGS-SQKGDLLVEVSVVTPT 334 (373)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 99999997643 3579999999999994
No 14
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.8e-74 Score=570.43 Aligned_cols=326 Identities=37% Similarity=0.689 Sum_probs=278.2
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~ 159 (416)
..|||+||||+++||.+|||+|||+||++||||+++.+ ++|+++|++|++||+||+||.+|++||+++..+......+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 47999999999999999999999999999999999754 67899999999999999999999999999876543110000
Q ss_pred CCCCCCccCCCCCCceeccccccccch-hhhhhhhhcC--------CCcccCCCeEEEEEeeeeecccCcceeeeeeeee
Q 014884 160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (416)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~~-~~~F~~~f~~--------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~ 230 (416)
...++| |.++|. .|.+.| .++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+++.+
T Consensus 83 ~~~g~~--------~~~~~~-~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~ 153 (369)
T PRK14282 83 ESGGGF--------FEDIFK-DFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE 153 (369)
T ss_pred CCCCcc--------cccccc-cccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence 000010 111111 111111 2556666652 1134688999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecc
Q 014884 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (416)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~ 302 (416)
.|+.|+|+|........+|+.|+|+|++... .++++|+.|+|+|+++++.|..|+|.|++.+.++++|.|||
T Consensus 154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~ 233 (369)
T PRK14282 154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233 (369)
T ss_pred cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence 9999999999888888999999999987532 13679999999999999999999999999999999999999
Q ss_pred cccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCC
Q 014884 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV 381 (416)
Q Consensus 303 G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~ 381 (416)
|+.+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+|+||+ ++|+||+++
T Consensus 234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~ 313 (369)
T PRK14282 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGT 313 (369)
T ss_pred CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCc
Confidence 9999999999999999777788999999999999999999999999999999999999999999999996 899999999
Q ss_pred CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 382 ~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++|++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 314 ~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~ 347 (369)
T PRK14282 314 QPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPK 347 (369)
T ss_pred CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 999999999999997532 3479999999999994
No 15
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7e-74 Score=570.26 Aligned_cols=315 Identities=41% Similarity=0.752 Sum_probs=276.5
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|++||++|+.+..... +++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-~~~ 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGG 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc-CCC
Confidence 469999999999999999999999999999999997 478899999999999999999999999999876543110 000
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
+ ...|. +|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+.+.+.|+
T Consensus 81 ---~------~~~f~---------~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~ 142 (371)
T PRK14287 81 ---G------AGDFG---------GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG 142 (371)
T ss_pred ---C------Ccccc---------chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence 0 00111 1345566666521 134789999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
.|+|+|........+|+.|+|+|++... ..+.+|+.|.|+|++++..|..|.|.|++.+.++++|.||||++
T Consensus 143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 222 (371)
T PRK14287 143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID 222 (371)
T ss_pred CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence 9999999887778899999999987542 13579999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~ 385 (416)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+|++|++++|+|+||++.|+||+++++|+
T Consensus 223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~ 302 (371)
T PRK14287 223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT 302 (371)
T ss_pred CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence 99999999999997666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 303 ~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~ 332 (371)
T PRK14287 303 SFRLRGKGVPNVHG-RGQGDQHVQVRVVTPK 332 (371)
T ss_pred EEEEcCCCccCCCC-CCCCCEEEEEEEEcCC
Confidence 99999999997643 2479999999999995
No 16
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.2e-74 Score=572.80 Aligned_cols=323 Identities=41% Similarity=0.710 Sum_probs=279.2
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|++||++|+.+......+..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 469999999999999999999999999999999997 4778999999999999999999999999998766432100000
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
.++ .+|.. .+.| +.|.++|+.+|++. ...++.|+++.|.|||+|+|+|+++++.+.+.+.|+
T Consensus 82 --~~~------~~~~~--~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~ 150 (380)
T PRK14276 82 --GGF------GGFDG--SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCH 150 (380)
T ss_pred --CCC------CCccc--cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCC
Confidence 000 01110 0011 13556777777531 134688999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
.|+|+|........+|+.|+|+|.+... ..+++|+.|+|+|++++.+|..|+|.|++.+.++++|.||||++
T Consensus 151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (380)
T PRK14276 151 TCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE 230 (380)
T ss_pred CCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence 9999999888888899999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~ 385 (416)
+|++|+|+|+|++...+..+|||+|+|+|+||+.|+|+|+||+++++|+|.+|++|++++|+|+||++.|+||+++++|+
T Consensus 231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~ 310 (380)
T PRK14276 231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGK 310 (380)
T ss_pred CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCC
Confidence 99999999999998766678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 311 ~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~ 340 (380)
T PRK14276 311 KFRLRGKGAPKLRG-GGNGDQHVTVNIVTPT 340 (380)
T ss_pred EEEECCCCcCCCCC-CCCCCEEEEEEEECCC
Confidence 99999999997643 2469999999999995
No 17
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-73 Score=568.66 Aligned_cols=319 Identities=41% Similarity=0.756 Sum_probs=280.2
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|+.|....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~----- 77 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT----- 77 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence 479999999999999999999999999999999998778899999999999999999999999999987654311
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhc-C-C-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D-E-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~-~-~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~ 231 (416)
.+.++ .+|.++| +.|.++|+++|+ + . ...+++|++++|.|||+|+|+|+++++.+++.+.
T Consensus 78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~ 146 (366)
T PRK14294 78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET 146 (366)
T ss_pred CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence 01111 0121111 123456666665 1 1 1246889999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCC
Q 014884 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (416)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G 307 (416)
|+.|+|+|.........|+.|+|.|.+... .++++|+.|+|.|+.++..|..|+|.|++.+.++++|.||||+++|
T Consensus 147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 226 (366)
T PRK14294 147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG 226 (366)
T ss_pred CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence 999999999887788899999999987532 2478999999999999999999999999999999999999999999
Q ss_pred CEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEE
Q 014884 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (416)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~ 387 (416)
++|+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+||||++.|+||+++++|+++
T Consensus 227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~i 306 (366)
T PRK14294 227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF 306 (366)
T ss_pred cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEE
Confidence 99999999998777778999999999999999999999999999999999999999999999999899999999999999
Q ss_pred EEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 388 ~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 307 ri~G~G~p~~~~-~~~GDL~V~~~v~~P~ 334 (366)
T PRK14294 307 RFKGKGIPSLRG-GGRGDQIIEVEVKVPT 334 (366)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 999999997643 2579999999999994
No 18
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-73 Score=569.30 Aligned_cols=320 Identities=43% Similarity=0.765 Sum_probs=277.9
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|++||++|+.+..... +.
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~~- 79 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-GG- 79 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-CC-
Confidence 369999999999999999999999999999999997 467899999999999999999999999999876543210 00
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
.++. +.+|.. .| +|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+++.+.|+
T Consensus 80 --~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~ 147 (376)
T PRK14280 80 --GGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCD 147 (376)
T ss_pred --CCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCC
Confidence 0000 001110 01 2346666666521 124788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
.|+|+|........+|+.|+|+|++... .++.+|+.|+|+|++++.+|..|+|.|++.+.++++|.||+|++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~ 227 (376)
T PRK14280 148 TCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVD 227 (376)
T ss_pred CCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence 9999999888888999999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~ 385 (416)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|+++.|+||||++.|+||+++++|+
T Consensus 228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~ 307 (376)
T PRK14280 228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT 307 (376)
T ss_pred CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence 99999999999997767788999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 308 ~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~ 337 (376)
T PRK14280 308 QFRLKGKGVPNVRG-YGQGDQYVVVRVVTPT 337 (376)
T ss_pred EEEEcCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 99999999997643 2579999999999995
No 19
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-73 Score=570.94 Aligned_cols=323 Identities=39% Similarity=0.753 Sum_probs=279.8
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|++||++|+.+..... +.
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--~~ 80 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--GF 80 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--CC
Confidence 3699999999999999999999999999999999987788999999999999999999999999999876543110 00
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCC---------CcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE---------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~---------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~ 231 (416)
...+| ..|. + ..+ .+|.++|+.+|++. ...+++|++++|.|||+|+|+|+++++.+++.+.
T Consensus 81 ~~~~~------~~~~--~-~~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~ 150 (380)
T PRK14297 81 GSGGF------GGFD--F-SDM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN 150 (380)
T ss_pred CCCCC------CCcC--c-ccc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence 00011 0111 0 001 12456666666521 1246889999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (416)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (416)
|+.|+|+|........+|+.|+|.|+++.. .++.+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||
T Consensus 151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G 230 (380)
T PRK14297 151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG 230 (380)
T ss_pred CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence 999999999888788899999999987532 236799999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCC
Q 014884 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (416)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~ 383 (416)
+++|++|+|+|+|++...+..+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||++.|+||+++++
T Consensus 231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~ 310 (380)
T PRK14297 231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQP 310 (380)
T ss_pred CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCC
Confidence 99999999999999877677799999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 384 g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 311 g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~ 342 (380)
T PRK14297 311 GTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPK 342 (380)
T ss_pred CCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCC
Confidence 9999999999997642 3579999999999995
No 20
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-73 Score=568.45 Aligned_cols=320 Identities=45% Similarity=0.838 Sum_probs=280.0
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||+++..+..... +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G-- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876543210 0
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~ 234 (416)
..++. +..+ |.+.|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+++.+.|+.
T Consensus 80 -~~~~~---~~~~--------~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~ 147 (371)
T PRK10767 80 -GGGFG---GGGG--------FGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT 147 (371)
T ss_pred -CCCCC---Cccc--------cccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence 01110 0001 122344566666642 12357899999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEE
Q 014884 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (416)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i 310 (416)
|+|+|.........|+.|+|+|++... .++.+|+.|+|.|+++++.|..|+|.|++.+.++++|.||||+.+|++|
T Consensus 148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i 227 (371)
T PRK10767 148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI 227 (371)
T ss_pred CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence 999999888888899999999987543 2467999999999999999999999999999999999999999999999
Q ss_pred EEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEc
Q 014884 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR 390 (416)
Q Consensus 311 ~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~ 390 (416)
+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+||+|+++.|+||||.+.|+||+++++|++++|+
T Consensus 228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~ 307 (371)
T PRK10767 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR 307 (371)
T ss_pred EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence 99999999766778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 391 GKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 391 g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|+|||..+. ..+|||||+|+|.||+
T Consensus 308 g~G~p~~~~-~~~GDL~v~~~v~~P~ 332 (371)
T PRK10767 308 GKGVKSVRS-GARGDLYCQVVVETPV 332 (371)
T ss_pred CCCcCCCCC-CCCCCEEEEEEEECCC
Confidence 999997643 3579999999999995
No 21
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-73 Score=567.57 Aligned_cols=331 Identities=38% Similarity=0.708 Sum_probs=273.8
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++++.+....... +
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~-~ 80 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS-G 80 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc-C
Confidence 369999999999999999999999999999999998778899999999999999999999999999987654321000 0
Q ss_pred CCCCCccCCCCCCceeccc---cccccc--hhh----hhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceee
Q 014884 161 DAEGFRYAGDAEGFRYAYQ---THFSDS--FHK----IFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHV 224 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~---~~f~~~--~~~----~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~ 224 (416)
...+|. +++..|.++|. +.|+++ +.. -|...|++. ...+++|+++.|.|||+|+|+|+++++
T Consensus 81 ~~~~~~--~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i 158 (397)
T PRK14281 81 GGPGYG--GGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTL 158 (397)
T ss_pred CCCCCC--cCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEE
Confidence 000110 00001211111 111100 000 000011110 113688999999999999999999999
Q ss_pred eeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEE
Q 014884 225 SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEV 296 (416)
Q Consensus 225 ~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l 296 (416)
.+++.+.|+.|+|+|.... ...+|+.|+|.|+++.. ..+.+|+.|.|.|++++++|..|+|.|++...+++
T Consensus 159 ~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~ 237 (397)
T PRK14281 159 KIKKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTV 237 (397)
T ss_pred EEEeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEE
Confidence 9999999999999999775 57899999999987542 12679999999999999999999999999999999
Q ss_pred EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEE
Q 014884 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVK 376 (416)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ 376 (416)
+|.||||+++|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||++.|+
T Consensus 238 ~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ 317 (397)
T PRK14281 238 KVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLT 317 (397)
T ss_pred EEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEE
Confidence 99999999999999999999998767789999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 377 IPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 377 ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
||+++++|++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 318 ip~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~ 356 (397)
T PRK14281 318 IPAGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPK 356 (397)
T ss_pred eCCccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCC
Confidence 99999999999999999997542 3579999999999995
No 22
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.1e-72 Score=560.01 Aligned_cols=326 Identities=39% Similarity=0.720 Sum_probs=273.4
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||+||+||.+|++||+++..+.........
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 4699999999999999999999999999999999975 778999999999999999999999999998765432100000
Q ss_pred CCCCCc---cCCCCCCceeccccccccchhhhhhhhhcC-----------CCcccCCCeEEEEEeeeeecccCcceeeee
Q 014884 161 DAEGFR---YAGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSF 226 (416)
Q Consensus 161 ~~~~~~---~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-----------~~~~~g~di~~~l~isl~e~~~G~~~~~~~ 226 (416)
...+|. ..+..+.|.+||+. |+ |+.+|++ ....+++|+++.|.|||+|+|+|+++++.+
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~-fg------~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~ 153 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDI-FG------FGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEV 153 (382)
T ss_pred cccccccccCCCHHHHHHHHHHh-cc------ccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEE
Confidence 001111 00001112222110 00 0111221 112368899999999999999999999999
Q ss_pred eeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecc
Q 014884 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (416)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~ 302 (416)
++.+.|..|+|+|........+|+.|+|+|+++.. .++++|+.|+|.|. +++.|..|+|.|++.+.++++|.|||
T Consensus 154 ~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~ 232 (382)
T PRK14291 154 PRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPP 232 (382)
T ss_pred eeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCC
Confidence 99999999999999888888999999999987543 24689999999995 78999999999999999999999999
Q ss_pred cccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCC
Q 014884 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV 381 (416)
Q Consensus 303 G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~ 381 (416)
|+.+|++|+|+|+|+.+..++.+|||||+|+++||+.|+|+|+||++++.|+|.+|++|+++.|+|+||+ ++|+||+++
T Consensus 233 G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~ 312 (382)
T PRK14291 233 GVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGT 312 (382)
T ss_pred CCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCcc
Confidence 9999999999999999877788999999999999999999999999999999999999999999999996 899999999
Q ss_pred CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 382 ~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++|++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 313 ~~G~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~ 346 (382)
T PRK14291 313 KEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPK 346 (382)
T ss_pred CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCC
Confidence 999999999999997643 2579999999999994
No 23
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-71 Score=553.84 Aligned_cols=322 Identities=37% Similarity=0.711 Sum_probs=276.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (416)
.|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|++||++|..+..... ..+.
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~-~~~~ 80 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQ-SRGG 80 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccc-ccCC
Confidence 69999999999999999999999999999999987 467889999999999999999999999999876543110 0000
Q ss_pred CCCCccCCCCCCceeccccccccchhhhhhhhhcCC-------CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCC
Q 014884 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (416)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~-------~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~ 234 (416)
..++ .+|. ..|.+.|.++|+.+|++. ...+++|+++.|.|||+|+|+|+++++.+++.+.|+.
T Consensus 81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~ 150 (372)
T PRK14300 81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT 150 (372)
T ss_pred CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence 0000 0110 011223445555544421 1146889999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEE
Q 014884 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (416)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i 310 (416)
|+|+|........+|+.|+|+|.+... .++.+|+.|.|.|++++++|..|+|.|++.+.++++|.||||+++|++|
T Consensus 151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 230 (372)
T PRK14300 151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI 230 (372)
T ss_pred CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence 999999888888999999999987543 2467999999999999999999999999999999999999999999999
Q ss_pred EEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCCCCcEEEE
Q 014884 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVL 389 (416)
Q Consensus 311 ~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~~g~~~~l 389 (416)
+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|+|| .++|+||+++++|++++|
T Consensus 231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri 310 (372)
T PRK14300 231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL 310 (372)
T ss_pred EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence 9999999877777899999999999999999999999999999999999999999999998 589999999999999999
Q ss_pred cCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 390 RGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 390 ~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+|+|||..+. ..+|||||+|+|.||+
T Consensus 311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~ 336 (372)
T PRK14300 311 RSKGMSKMRS-TIRGDMLTHIHVEVPK 336 (372)
T ss_pred CCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 9999997542 2579999999999994
No 24
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=3e-71 Score=550.35 Aligned_cols=320 Identities=44% Similarity=0.796 Sum_probs=276.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCCC
Q 014884 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA 162 (416)
Q Consensus 83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~~ 162 (416)
|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|++||+++..+....... ..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~ 77 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG 77 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence 7999999999999999999999999999999997 57789999999999999999999999999987654321100 00
Q ss_pred CCCccCCCCCCceeccccccccchhhhhhhhhcC---------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 163 ~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
.+| ++|. .+.| +.|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+++.+.|+
T Consensus 78 ~~~------~~~~---~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~ 147 (354)
T TIGR02349 78 GGF------NGFD---IGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE 147 (354)
T ss_pred CCc------CCcc---ccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence 011 0000 0011 1245666666652 1234788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
.|+|+|.........|+.|+|.|.++.. ..+++|+.|.|+|++++.+|..|+|.|++.+.++++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 227 (354)
T TIGR02349 148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227 (354)
T ss_pred CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence 9999999887778999999999986532 13579999999999999999999999999999999999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~ 385 (416)
+|++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+|+||.++|+||+++++|+
T Consensus 228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~ 307 (354)
T TIGR02349 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT 307 (354)
T ss_pred CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence 99999999999987667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 308 ~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~ 337 (354)
T TIGR02349 308 VFRLKGKGVPRLRG-NGRGDLLVTVKVETPK 337 (354)
T ss_pred EEEECCCCcCCCCC-CCCCCEEEEEEEECCC
Confidence 99999999997643 2579999999999995
No 25
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.7e-71 Score=552.85 Aligned_cols=326 Identities=38% Similarity=0.682 Sum_probs=277.7
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccC
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~ 159 (416)
...|||++|||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|++||++|+.|.... +.
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~ 79 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQ 79 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--cc
Confidence 35799999999999999999999999999999999974 7899999999999999999999999999987654310 00
Q ss_pred CCCCCCccCCCCCCceeccccccccchhhhhhhh-hcC---CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCC
Q 014884 160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (416)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~-f~~---~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C 235 (416)
. ..|...+..+.|..++ .+|.++|+.+ |++ ....++.|++++|.|||+|+|+|+++++.+++.+.|+.|
T Consensus 80 ~--~~~~~~~~~~~~~~~~-----~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C 152 (378)
T PRK14283 80 E--DIFNNINFEDIFQGFG-----FGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVC 152 (378)
T ss_pred c--ccccccCccccccccc-----cchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCC
Confidence 0 0011000011111111 1233444444 432 123578899999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCC
Q 014884 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (416)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G 307 (416)
+|+|.........|+.|+|.|.+... ..+.+|+.|.|.|+.+++.|..|+|.|++.+.++++|.||||+++|
T Consensus 153 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G 232 (378)
T PRK14283 153 NGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETG 232 (378)
T ss_pred CccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCC
Confidence 99999888888899999999997532 1257999999999999999999999999999999999999999999
Q ss_pred CEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEE
Q 014884 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (416)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~ 387 (416)
++|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||.+.|+||+++++|+++
T Consensus 233 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ 312 (378)
T PRK14283 233 SRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTF 312 (378)
T ss_pred cEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEE
Confidence 99999999998766678999999999999999999999999999999999999999999999999899999999999999
Q ss_pred EEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 388 ~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+|+|+|||..+. ..+|||||+|+|.||+
T Consensus 313 ri~g~G~p~~~~-~~~GdL~v~~~v~~P~ 340 (378)
T PRK14283 313 RLKGHGMPSLRW-SGKGNLYVKVKVVVPK 340 (378)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEEeCC
Confidence 999999997643 2579999999999995
No 26
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-70 Score=545.01 Aligned_cols=315 Identities=37% Similarity=0.695 Sum_probs=269.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
.|||+||||+++||.+|||+|||+||++||||++++++ +|+++|++|++||++|+||.+|++||++|+.+... +++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~---~~~ 79 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GGS 79 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc---CCC
Confidence 69999999999999999999999999999999998664 78999999999999999999999999998765421 000
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC--------------CCcccCCCeEEEEEeeeeecccCcceeeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------------ETSHFAPDIQVELVLSFAEAAKGCTKHVSF 226 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~--------------~~~~~g~di~~~l~isl~e~~~G~~~~~~~ 226 (416)
++.+ ..|.. | +.+.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.+
T Consensus 80 ---~~~~----~~~~~-----~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~ 146 (365)
T PRK14290 80 ---NFNW----DNFTH-----F-SDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKY 146 (365)
T ss_pred ---Cccc----ccccc-----c-cchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEe
Confidence 1100 00000 0 0112233333221 011247899999999999999999999999
Q ss_pred eeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEE
Q 014884 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (416)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V 298 (416)
.+.+.|+.|+|+|.... ...+|+.|+|.|++++. +...+|+.|.|.|++++.+|..|+|.|++.+.++++|
T Consensus 147 ~r~~~C~~C~G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V 225 (365)
T PRK14290 147 RRNAMCPDCSGTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISV 225 (365)
T ss_pred eecccCCCCccccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEE
Confidence 99999999999998765 67899999999986542 1257999999999999999999999999999999999
Q ss_pred EecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeC
Q 014884 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP 378 (416)
Q Consensus 299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip 378 (416)
.||||+.+|++|+|+|+|+. .++.||||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||
T Consensus 226 ~Ip~G~~~G~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip 303 (365)
T PRK14290 226 KIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIP 303 (365)
T ss_pred EECCCCCCCcEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEEC
Confidence 99999999999999999986 4678999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 379 ~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++++|++++|+|+|||..+. ..+|||||+|+|.+|+
T Consensus 304 ~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~V~~P~ 340 (365)
T PRK14290 304 EGTQPGEVLKIKGAGMPHLNG-HGSGDLLVRINVEVPK 340 (365)
T ss_pred CccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 999999999999999997643 2479999999999994
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-69 Score=543.39 Aligned_cols=332 Identities=37% Similarity=0.647 Sum_probs=276.2
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++++.+..... +.+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~-~~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA-GGG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC-CCC
Confidence 5799999999999999999999999999999999988888999999999999999999999999999876543110 000
Q ss_pred CCCCCccCCCCCCcee---ccccccccchhhh--hhhhhcCCCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCC
Q 014884 161 DAEGFRYAGDAEGFRY---AYQTHFSDSFHKI--FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~---~~~~~f~~~~~~~--F~~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C 235 (416)
.+.+.. .+..+.|.. +|++.|++ +... |..........++.|+++.|.|||+|+|+|+++++.+++.+.|+.|
T Consensus 83 ~~~~~~-~~~~~~f~~f~~~fg~~~gg-~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 83 GFSGEG-MSMEDIFSMFGDIFGGHGGG-FGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCC-cChhhhhHHhhhhhcccccC-cccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 110000 001111111 12111100 0000 0000000123468899999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCC
Q 014884 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (416)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G 307 (416)
+|+|.........|+.|+|.|+++.. .++.+|+.|+|.|++++..|..|.|.|++.+.++++|.||+|+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 99999888888999999999997643 1367999999999999999999999999999999999999999999
Q ss_pred CEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEE
Q 014884 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (416)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~ 387 (416)
++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||++.|+||+++++|+++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL 320 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence 99999999998766778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 388 ~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+|+|+|||..+. ..+|||||+|+|.||+
T Consensus 321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~ 348 (386)
T PRK14289 321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPE 348 (386)
T ss_pred EECCCCcCCCCC-CCCCcEEEEEEEEeCC
Confidence 999999997543 3579999999999994
No 28
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-69 Score=540.47 Aligned_cols=316 Identities=39% Similarity=0.741 Sum_probs=273.3
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|++||.++..+..+. .
T Consensus 2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~----~ 76 (374)
T PRK14293 2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----A 76 (374)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC----C
Confidence 369999999999999999999999999999999987 46789999999999999999999999999976553210 0
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC-------------CCcccCCCeEEEEEeeeeecccCcceeeeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~ 227 (416)
.+.++ + .+ ++|.++|+.+|++ ....+++|++++|.|||+|+|+|+++++.++
T Consensus 77 ~~~~~---~---~~---------~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~ 141 (374)
T PRK14293 77 GFPDM---G---DM---------GGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIP 141 (374)
T ss_pred CcCCc---c---cc---------cchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEee
Confidence 00000 0 00 0122333333321 1134678999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEE
Q 014884 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~ 299 (416)
+.+.|+.|+|+|.........|+.|+|.|+++.. ..+.+|+.|.|.|+.++..|..|.|.|++.+.++++|.
T Consensus 142 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~ 221 (374)
T PRK14293 142 HLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKIN 221 (374)
T ss_pred ccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEE
Confidence 9999999999999888888899999999987532 12579999999999999999999999999999999999
Q ss_pred ecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCC
Q 014884 300 IPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPK 379 (416)
Q Consensus 300 Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~ 379 (416)
||||+++|++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||+++|+||+
T Consensus 222 IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~ 301 (374)
T PRK14293 222 IPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPA 301 (374)
T ss_pred eCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCC
Confidence 99999999999999999987666778999999999999999999999999999999999999999999999998999999
Q ss_pred CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 380 GVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 380 g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++++|++++|+|+|||..+..+.+|||||+|+|+||+
T Consensus 302 ~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~ 338 (374)
T PRK14293 302 GTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPT 338 (374)
T ss_pred CCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCC
Confidence 9999999999999999765434579999999999994
No 29
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.8e-68 Score=527.70 Aligned_cols=313 Identities=36% Similarity=0.671 Sum_probs=269.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (416)
.|||+||||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|+.||++|+.+..+. ..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~--~~~- 77 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM--PGG- 77 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc--cCC-
Confidence 59999999999999999999999999999999997 57789999999999999999999999999987652110 000
Q ss_pred CCCCccCCCCCCceeccccccccchhhhhhhhhcC---------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeec
Q 014884 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (416)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C 232 (416)
.+|..+ .| ++.++|+.+|++ ....++.|+++.+.|||+|+|+|+++++.+++.+.|
T Consensus 78 ----------~~~~~~---~~--d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C 142 (371)
T PRK14292 78 ----------DPFGGM---GF--DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTEC 142 (371)
T ss_pred ----------cccCcc---CC--ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecC
Confidence 011000 00 122444444442 123468899999999999999999999999999999
Q ss_pred CCCCCCCCCCCC-cccccCCCcceeEEEeC--------CCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccc
Q 014884 233 DSCHGRGFPADA-KTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (416)
Q Consensus 233 ~~C~G~G~~~~~-~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G 303 (416)
+.|+|+|..... ...+|+.|+|+|++... ..+.+|+.|+|.|..++..|..|.|.|++...++++|.||||
T Consensus 143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 222 (371)
T PRK14292 143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRG 222 (371)
T ss_pred CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCC
Confidence 999999987654 37899999999987532 135799999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCC
Q 014884 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (416)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~ 383 (416)
+.+|++|+|+|+|++.+.+ . |||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+..|+||+++++
T Consensus 223 ~~~G~~i~~~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~ 300 (371)
T PRK14292 223 IDEGYRIRVAGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQH 300 (371)
T ss_pred CCCCcEEEEecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCC
Confidence 9999999999999987544 3 9999999999999999999999999999999999999999999999888999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 384 g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|++++|+|+|||..+. ..+|||||+|+|.||+
T Consensus 301 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~ 332 (371)
T PRK14292 301 GDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPK 332 (371)
T ss_pred CcEEEECCCCCCCCCC-CCCCCEEEEEEEECCC
Confidence 9999999999997633 2469999999999994
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.4e-65 Score=486.01 Aligned_cols=308 Identities=32% Similarity=0.581 Sum_probs=268.9
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
...||+||||+++||.+|||+|||+||++||||||++ |.++|++|++||||||||++|++||++|+.+......+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-- 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-- 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence 4689999999999999999999999999999999986 68999999999999999999999999988776432111
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcCCCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~ 240 (416)
+++ ..|+.||+ | . ..+.+...+++|+.+.+.|+|+|+|.|.++.+.++++.+|+.|+|.|.
T Consensus 78 --~g~------~~f~~~F~--~--------g-~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg 138 (337)
T KOG0712|consen 78 --GGF------GGFSQFFG--F--------G-GNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG 138 (337)
T ss_pred --CCC------ccHHHhcc--C--------C-CcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence 010 11444443 0 0 112233456999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCCcceeEEEeC---------CCcccCCCCCCceEE--eeeeeeEeeCCcEEeceEEEEEEecccccCCCE
Q 014884 241 PADAKTKICSTCRGIGRVTIP---------PFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (416)
Q Consensus 241 ~~~~~~~~C~~C~G~G~~~~~---------~~~~~C~~C~G~G~~--~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~ 309 (416)
...... .|+.|.|+|..+.. .++..|..|+|.|.+ .++.|+.|.|.+++...+.++|.|++|+.++++
T Consensus 139 ksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k 217 (337)
T KOG0712|consen 139 KSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK 217 (337)
T ss_pred CCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence 766543 89999999985421 347899999999998 579999999999999999999999999999999
Q ss_pred EEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcE
Q 014884 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQL 386 (416)
Q Consensus 310 i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~ 386 (416)
|.+.|++++.+ +..|||++|.|..++|+.|.|.|+||++..+|+|.||++|+.+.+.|+||+ +.+.++++ +.||++
T Consensus 218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~ 296 (337)
T KOG0712|consen 218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT 296 (337)
T ss_pred eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence 99999999865 566999999999999999999999999999999999999999999999998 78888887 899999
Q ss_pred EEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 387 ~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++|+|+|||+.+++ +|||||+|+|+||+
T Consensus 297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK 324 (337)
T ss_pred EeecCCCcccccCC--CCcEEEEEEEEcCC
Confidence 99999999998765 89999999999995
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-55 Score=425.67 Aligned_cols=253 Identities=38% Similarity=0.664 Sum_probs=207.0
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||+++..+......+..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 479999999999999999999999999999999997 5788999999999999999999999999998764321100000
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC---------------CCcccCCCeEEEEEeeeeecccCcceeee
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------------ETSHFAPDIQVELVLSFAEAAKGCTKHVS 225 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~---------------~~~~~g~di~~~l~isl~e~~~G~~~~~~ 225 (416)
... ++...|..+ .+ +.|+++|+.+|++ ....++.|+++++.|||+|+|.|+++.+.
T Consensus 82 ~~~-----~~~~~~~~~---~~-~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~ 152 (291)
T PRK14299 82 PGP-----PGGGDFSGF---NV-GDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVE 152 (291)
T ss_pred CCC-----CCCCCcccc---Cc-CCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEe
Confidence 000 000011100 00 1233445444432 11346889999999999999999998875
Q ss_pred eeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEeccccc
Q 014884 226 FDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (416)
Q Consensus 226 ~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~ 305 (416)
+. .++++|.||||++
T Consensus 153 l~-----------------------------------------------------------------g~~~~V~Ip~G~~ 167 (291)
T PRK14299 153 VA-----------------------------------------------------------------GERLSVRIPPGVR 167 (291)
T ss_pred eC-----------------------------------------------------------------CEEEEEecCCCcC
Confidence 41 1368999999999
Q ss_pred CCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCc
Q 014884 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (416)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~ 385 (416)
+|++|+|+|+|++. |||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|+||.+.|+||+++++|+
T Consensus 168 ~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g~ 241 (291)
T PRK14299 168 EGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGR 241 (291)
T ss_pred CCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCCC
Confidence 99999999999863 899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 386 ~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++|+|+|||..+ +.+|||||+|+|.||+
T Consensus 242 ~~rl~g~G~p~~~--~~~GDL~v~~~V~~P~ 270 (291)
T PRK14299 242 KLRLKGKGWPRGP--AGRGDQYAEVRITIPT 270 (291)
T ss_pred EEEECCCCCCCCC--CCCCCEEEEEEEECCC
Confidence 9999999999643 3579999999999995
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=4.7e-54 Score=418.41 Aligned_cols=268 Identities=32% Similarity=0.610 Sum_probs=217.2
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||++|||+++||.+|||+|||+||++||||+++ +++++++|++|++||++|+||.+|+.||.++..+.... +...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~-~~~~ 80 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQ-FNRQ 80 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcc-cccc
Confidence 369999999999999999999999999999999986 46799999999999999999999999999864321100 0000
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC-------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~ 233 (416)
. .+ +.+..|. ..+|.++|+.+|+. ....++.|+.+++.|+|+|++.|+.+.+.+++.+
T Consensus 81 ~--~~---~~~~~~~-------~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~--- 145 (306)
T PRK10266 81 F--QH---GDGQSFN-------AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV--- 145 (306)
T ss_pred c--cc---CCCCCCC-------CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---
Confidence 0 00 0000110 01345666666653 1233678999999999999999999999886542
Q ss_pred CCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEc
Q 014884 234 SCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (416)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~ 313 (416)
|.| .|.+. ....++++|.||+|+++|++|+|+
T Consensus 146 -~~g-----------------~G~~~------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~ 177 (306)
T PRK10266 146 -YNA-----------------FGMIE------------------------------QEIPKTLNVKIPAGVGNGQRIRLK 177 (306)
T ss_pred -ccC-----------------CCeEE------------------------------EeeeEEEEEEECCCCcCCcEEEEe
Confidence 212 22110 012358999999999999999999
Q ss_pred CccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcCCC
Q 014884 314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG 393 (416)
Q Consensus 314 g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G 393 (416)
|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|++|++.|+||+++++|++++|+|+|
T Consensus 178 g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G 257 (306)
T PRK10266 178 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG 257 (306)
T ss_pred cCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCC
Confidence 99998766778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcEEEEEEEEcCC
Q 014884 394 LAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 394 ~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
||..+ .+|||||+|+|.+|+
T Consensus 258 ~p~~~---~~GdL~v~~~v~~P~ 277 (306)
T PRK10266 258 LVSKK---QTGDLYAVLKIVMPP 277 (306)
T ss_pred CCCCC---CCCCEEEEEEEECCC
Confidence 99754 369999999999995
No 33
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-43 Score=330.80 Aligned_cols=307 Identities=30% Similarity=0.439 Sum_probs=232.3
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~ 158 (416)
...+|||+||||+++||.+|||+|||+||++||||+|+++|.|.++|++|+.||+|||||.+|+.||++|+.|.....
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~-- 90 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN-- 90 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc--
Confidence 446899999999999999999999999999999999999999999999999999999999999999999988876421
Q ss_pred CCCCCCCccCCC-CCCceeccccccccchhhhhhhhhcCCCcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCC
Q 014884 159 AGDAEGFRYAGD-AEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHG 237 (416)
Q Consensus 159 ~~~~~~~~~~~~-~~~f~~~~~~~f~~~~~~~F~~~f~~~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G 237 (416)
....+ ++. .++|..+|+.. + --|+.....+...+|.++...+..+++++|.|...+....+.+.|. |.|
T Consensus 91 -~~~~~---g~~~~~~f~~~f~df-g----~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g 160 (336)
T KOG0713|consen 91 -KDGEG---GGGGNDIFSAFFGDF-G----VTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APG 160 (336)
T ss_pred -ccccc---CCcccchHHHhhccc-c----cccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCc
Confidence 01111 111 24555544321 0 0111111123467889999999999999999887665554444432 111
Q ss_pred CCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEe-eeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCcc
Q 014884 238 RGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAG 316 (416)
Q Consensus 238 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G 316 (416)
+- +...+...| .+..+.|....+ ...|.+|.+.+......++++.+..|+..+....+..+|
T Consensus 161 ~~-~~~~~~~~~----------------~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
T KOG0713|consen 161 TR-KCNCRLEMF----------------TQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEG 223 (336)
T ss_pred cc-ccCChhhhe----------------eeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccC
Confidence 11 111111111 122222222222 345666666777778889999999999999999999998
Q ss_pred CCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcC
Q 014884 317 NAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLA 395 (416)
Q Consensus 317 ~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p 395 (416)
.+.. -+.|||+++.+..-+|+.|.|+++|+++++.+++.+++.|+..++.++|+. +.++.-.+..|+..++.+++|||
T Consensus 224 ~~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~ 302 (336)
T KOG0713|consen 224 EPHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMP 302 (336)
T ss_pred Ccce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccch
Confidence 8764 457999999999999999999999999999999999999999999999997 45666677889999999999999
Q ss_pred CCCCCCCCCcEEEEEEEEcC
Q 014884 396 KNGLFLDHGDQYVRFRVNFP 415 (416)
Q Consensus 396 ~~~~~~~~Gdl~v~~~v~~P 415 (416)
.-......|++|++|.+.+|
T Consensus 303 ~l~~~~~~~~~~~t~~~~~~ 322 (336)
T KOG0713|consen 303 LLKNRNEKGNLYVTFDVEFP 322 (336)
T ss_pred hhhccchhcceeEEecccCc
Confidence 66444467999999999998
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=7.7e-41 Score=342.97 Aligned_cols=155 Identities=17% Similarity=0.227 Sum_probs=136.6
Q ss_pred CeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeE
Q 014884 204 DIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMT 283 (416)
Q Consensus 204 di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~ 283 (416)
+|.+.+.|+|+++|+||++++++.|.+.| |.|.
T Consensus 658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G~------------------------------------------- 690 (871)
T TIGR03835 658 NLVYEEEVPQILFFNNQIKEIKYTRHTVD----GNTE------------------------------------------- 690 (871)
T ss_pred ceEEecccCHHHHhCCCeEEEEEEEeecc----CCCc-------------------------------------------
Confidence 56888999999999999999999887654 2111
Q ss_pred eeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCe
Q 014884 284 CKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGK 363 (416)
Q Consensus 284 C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~ 363 (416)
..+.+.++++|.||+|+++|++|+|+|+|+.++ ++ +|||||+|+++||+.|+|+|+||+++++|+|.+||+|++
T Consensus 691 ----ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgt 764 (871)
T TIGR03835 691 ----STTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGI 764 (871)
T ss_pred ----ceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCE
Confidence 113446799999999999999999999999864 33 499999999999999999999999999999999999999
Q ss_pred eEEecCCCeEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884 364 VDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN 413 (416)
Q Consensus 364 ~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~ 413 (416)
+.|+||||++.|+||+++++|+++||+|+|||..+ +.||||||+|.|.
T Consensus 765 IeIpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~ 812 (871)
T TIGR03835 765 IDVFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYS 812 (871)
T ss_pred EEeeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEe
Confidence 99999999999999999999999999999999643 3579999999985
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.3e-40 Score=313.31 Aligned_cols=241 Identities=44% Similarity=0.788 Sum_probs=205.4
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (416)
..|||+||||+++|+..|||+||++||++||||.+.+ ++|+++|++|.+|||+|+|+++|++||.++..+. .
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-------~ 113 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-------G 113 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-------c
Confidence 3499999999999999999999999999999999986 5899999999999999999999999999965430 0
Q ss_pred CCCCCccCCCCCCceeccccccccchhhhhhhhhcC-C-CcccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCC
Q 014884 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-E-TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (416)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-~-~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~ 238 (416)
++ .++++ ++|..+|++ . ....+.++++.+.++|+++..|+.+.+.+.....|..|.|.
T Consensus 114 ~~-------~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~ 173 (288)
T KOG0715|consen 114 EF-------GGNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGS 173 (288)
T ss_pred cc-------cCCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCc
Confidence 00 11121 122222322 1 12335688888999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCcceeEEEeC---CCc-ccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEcC
Q 014884 239 GFPADAKTKICSTCRGIGRVTIP---PFT-STCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPE 314 (416)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~---~~~-~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g 314 (416)
|...+.+...|..|.|.|.+... ++. .+|..|.|.|.+..+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~ 253 (288)
T KOG0715|consen 174 GAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAG 253 (288)
T ss_pred CcccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEec
Confidence 99999999999999999965432 332 37999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHH
Q 014884 315 AGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357 (416)
Q Consensus 315 ~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~ 357 (416)
.|.. ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus 254 ~~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 254 HGND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred CCcc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence 8754 9999999999999999999999999998754
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=4.7e-22 Score=192.47 Aligned_cols=264 Identities=29% Similarity=0.476 Sum_probs=176.3
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCccccC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~~ 159 (416)
..|||++|+|.++|+.+||++||+++|++||||+++.. ..|+++|++|++||++|+|+.+|..||.+++.+..+.....
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 46999999999999999999999999999999998765 24666899999999999999999999999875443311000
Q ss_pred CC-CCC---CccCCCCCCceeccccc--cccc------h-----hhh-------hhhhhcC-----------CCcccCCC
Q 014884 160 GD-AEG---FRYAGDAEGFRYAYQTH--FSDS------F-----HKI-------FSEIFED-----------ETSHFAPD 204 (416)
Q Consensus 160 ~~-~~~---~~~~~~~~~f~~~~~~~--f~~~------~-----~~~-------F~~~f~~-----------~~~~~g~d 204 (416)
.. ..+ +......+.|.++|+.. +... + ... +....+. ....+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 00 000 11111122333343311 0000 0 000 0000000 00111112
Q ss_pred eEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEe
Q 014884 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC 284 (416)
Q Consensus 205 i~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C 284 (416)
+...+.+++++.+.++.+...+.+... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~- 193 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------TSNGR- 193 (306)
T ss_pred ccCCcceeHHHhccccceeeecccccc-----------------------------------------------cCCcc-
Confidence 333333355555555544444322110 00000
Q ss_pred eCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEE--EecCHHHHhcCC
Q 014884 285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG 362 (416)
Q Consensus 285 ~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~--~~I~l~~Al~G~ 362 (416)
........+.+.+.+++..|+.+....+|+... +..|-++++.+..++|+.|.+.++||... ..|++.+|++|.
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~ 269 (306)
T KOG0714|consen 194 ---EGSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV 269 (306)
T ss_pred ---cccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence 012345688999999999999999999998754 36788999999999999999999999999 999999999999
Q ss_pred eeEEecCCCe-EEEEeC-CCCCCCcEEEEcCCCcCC
Q 014884 363 KVDVPTLSGK-VQVKIP-KGVQPGQLLVLRGKGLAK 396 (416)
Q Consensus 363 ~~~i~~ldg~-~~v~ip-~g~~~g~~~~l~g~G~p~ 396 (416)
...++++++. ..+.+. ..+.++....++++|||.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 270 TVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred ceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 9999999886 444444 567899999999999985
No 37
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1e-19 Score=167.34 Aligned_cols=72 Identities=49% Similarity=0.808 Sum_probs=68.8
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~ 152 (416)
..|+|+|||++++|+.++||||||+||++||||+++++|++.++|++||+||++|+||.+|..||.+|+.+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 679999999999999999999999999999999999999999999999999999999999999999976654
No 38
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.76 E-value=1.4e-18 Score=136.02 Aligned_cols=71 Identities=45% Similarity=0.823 Sum_probs=60.9
Q ss_pred ceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 346 DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
||+++++|++++|++|++++|+|+|| .+.|+||+++++|++++|+|+|||.....+.+|||||+|+|.||+
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~ 72 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK 72 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 89999999999999999999999999 689999999999999999999999875545789999999999995
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.6e-17 Score=153.86 Aligned_cols=68 Identities=56% Similarity=0.903 Sum_probs=64.7
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~-a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
...+||+||||+++|+..||++|||++|++||||+++.++. ++++|+.|++||++|+|+.+|+.||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 45799999999999999999999999999999999998875 999999999999999999999999996
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=2.1e-18 Score=164.30 Aligned_cols=73 Identities=52% Similarity=0.847 Sum_probs=69.5
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~ 153 (416)
..|||+||||+.+|+.+||++|||+.|++||||||+++|.|.++|+.+.+||+||+|+.+|+.||..+..+..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 5799999999999999999999999999999999999999999999999999999999999999999766544
No 41
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.74 E-value=3.4e-18 Score=127.71 Aligned_cols=63 Identities=54% Similarity=0.979 Sum_probs=59.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014884 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD 145 (416)
Q Consensus 83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd 145 (416)
|||+||||+++++.++||++|+++++++|||++..+. ++++.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987665 58899999999999999999999998
No 42
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=3.4e-18 Score=166.99 Aligned_cols=75 Identities=40% Similarity=0.721 Sum_probs=68.7
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCC
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN 154 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~ 154 (416)
.+.|||.+|+|+++||.+|||+|||++++.|||||..+. ..|++.|+.|.+|||||+||.+|++||.+|++|...
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t 84 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT 84 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence 456999999999999999999999999999999998742 248999999999999999999999999999998763
No 43
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=1.3e-17 Score=163.10 Aligned_cols=71 Identities=49% Similarity=0.743 Sum_probs=66.0
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
.+.+.||+||||.++|+..|||++||+||++||||+|+.. .+|.++|+.|+.||+|||||..|+-||.+.+
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 4567999999999999999999999999999999998754 5699999999999999999999999999876
No 44
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.69 E-value=3.1e-17 Score=173.45 Aligned_cols=74 Identities=31% Similarity=0.508 Sum_probs=68.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~ 153 (416)
....+||+||||+++||..|||+|||+||++||||+++++ .|.++|++|++||+||+||.+|+.||.+|..|..
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3467999999999999999999999999999999999864 6888999999999999999999999999877654
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=7.4e-17 Score=144.99 Aligned_cols=70 Identities=49% Similarity=0.797 Sum_probs=64.2
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
...|+|+||||.++|+.++|++||++||+++|||+++ ...+|.++|++|+.||.||+|..+|+.||..|.
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~ 83 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS 83 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence 4469999999999999999999999999999999994 345699999999999999999999999999853
No 46
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.64 E-value=2.9e-16 Score=115.58 Aligned_cols=59 Identities=58% Similarity=0.901 Sum_probs=54.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHHhhhhhh
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSEK 140 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~a~~~f~~i~~Ay~~L~d~~~ 140 (416)
.|||+||||+++++.++||++|+++++++|||++++ .+.+++.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 389999999999999999999999999999999986 56788999999999999999853
No 47
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.63 E-value=5e-16 Score=147.41 Aligned_cols=69 Identities=48% Similarity=0.747 Sum_probs=64.0
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
+..+|||+||||.++|+..||-||||++|.+||||...+..+ |+++|-.|..|-|||+||++|+.+|..
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 456899999999999999999999999999999999986543 899999999999999999999999985
No 48
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.61 E-value=9.5e-16 Score=110.70 Aligned_cols=55 Identities=56% Similarity=0.985 Sum_probs=51.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 014884 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (416)
Q Consensus 83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d 137 (416)
|||+||||+++++.++||++|++|++++|||++++.+.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999999997656788999999999999986
No 49
>PHA03102 Small T antigen; Reviewed
Probab=99.59 E-value=1.6e-15 Score=131.26 Aligned_cols=66 Identities=24% Similarity=0.466 Sum_probs=60.8
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 82 ~~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
..+|+||||+++| |.+|||+|||++|+++|||++++ +++|++||+||++|+|+.+|..||.++...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 5789999999999 99999999999999999999764 479999999999999999999999987544
No 50
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.9e-15 Score=133.75 Aligned_cols=71 Identities=37% Similarity=0.665 Sum_probs=65.0
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
....|+|+||||++++|.+|||+|||+|.+++||||++...+.++.|..|++||+.|+|+..|..|..+|.
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~ 166 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN 166 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence 34579999999999999999999999999999999998655678889999999999999999999999964
No 51
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=5.7e-14 Score=137.22 Aligned_cols=131 Identities=28% Similarity=0.586 Sum_probs=103.0
Q ss_pred EEEEeeeeecccCccee--eeeeeeeecCCCCCCCCCCCCc-------ccccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884 207 VELVLSFAEAAKGCTKH--VSFDAFVPCDSCHGRGFPADAK-------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~--~~~~~~~~C~~C~G~G~~~~~~-------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (416)
.++.++-...+.-|... -.-+...+|++|+|+|.....+ +.+|+.|+|+|.+ +..+|..|+|.|++.
T Consensus 135 ~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v~ 210 (371)
T COG0484 135 KEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRVK 210 (371)
T ss_pred eeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeEe
Confidence 45555555555444333 1223678999999999753322 6799999999998 578999999999998
Q ss_pred eeeeeEeeCC-cEEeceE--------------------------------------------------------------
Q 014884 278 KDHCMTCKGS-GVVDGVK-------------------------------------------------------------- 294 (416)
Q Consensus 278 ~~~C~~C~g~-G~~~~~~-------------------------------------------------------------- 294 (416)
+..-.+++.+ |+.++++
T Consensus 211 ~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g 290 (371)
T COG0484 211 KKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDG 290 (371)
T ss_pred eeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCC
Confidence 8888888886 6666655
Q ss_pred EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcC
Q 014884 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS 341 (416)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~ 341 (416)
.++|.||||+++|++++|+|+|.+...+...|||||+|.|.-...+.
T Consensus 291 ~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls 337 (371)
T COG0484 291 RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLS 337 (371)
T ss_pred CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCC
Confidence 77899999999999999999999987777789999999998655543
No 52
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.50 E-value=3.2e-14 Score=126.76 Aligned_cols=66 Identities=32% Similarity=0.539 Sum_probs=58.6
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
.|||++|||++. ++..+|+++||+|++++|||+..+.++ +.+.|+.||+||++|+||.+|+.|+-.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 389999999995 788999999999999999999765432 567899999999999999999999864
No 53
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=4.3e-14 Score=125.15 Aligned_cols=67 Identities=30% Similarity=0.510 Sum_probs=58.4
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
.|||++|||++. ++.++|+++||+|++++|||++.+..+ +.+.+..||+||++|+||.+|+.|+-..
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 589999999996 789999999999999999999865332 3346789999999999999999998764
No 54
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.47 E-value=7.2e-14 Score=124.83 Aligned_cols=67 Identities=31% Similarity=0.513 Sum_probs=58.7
Q ss_pred cCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHH-----HHHHHHHHHHHhhhhhhhhhhccc
Q 014884 81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 81 ~~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~a~~-----~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
..|||++|||++. ++..+|+++||+|++++|||++.+.+++++ .++.||+||++|+||.+|+.|+-.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~ 78 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH 78 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence 4799999999995 689999999999999999999876555444 458999999999999999999964
No 55
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.47 E-value=8.2e-14 Score=123.92 Aligned_cols=69 Identities=23% Similarity=0.435 Sum_probs=61.0
Q ss_pred CcCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 80 SKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 80 ~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
...|||++||+++. .+..+|+++||+|++++|||++.+.++ +.+.|+.||+||++|+||.+|+.|+-..
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l 77 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL 77 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 35799999999996 678999999999999999999876543 5678999999999999999999999753
No 56
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.47 E-value=1.4e-13 Score=137.79 Aligned_cols=140 Identities=25% Similarity=0.471 Sum_probs=101.9
Q ss_pred EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (416)
..+.++-...+..|...- .-.....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.
T Consensus 145 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 220 (369)
T PRK14282 145 IPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSGR 220 (369)
T ss_pred EEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCcee
Confidence 344455454444343322 1123568999999997532 235699999999987 4678999999998
Q ss_pred EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (416)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (416)
+.+..-.++..+ |+.++.+
T Consensus 221 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l 300 (369)
T PRK14282 221 IRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLP 300 (369)
T ss_pred EEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCC
Confidence 765544444443 4333322
Q ss_pred ---EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEE
Q 014884 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (416)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~ 350 (416)
.++|.||+|+++|++|+|+|+|++...+..+|||||+|+|+.|+.|++++.+|+.+
T Consensus 301 dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 301 EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 68999999999999999999999865445689999999999999999999887654
No 57
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.43 E-value=3.6e-13 Score=134.54 Aligned_cols=120 Identities=23% Similarity=0.584 Sum_probs=95.9
Q ss_pred eeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|..... ...+|+.|.|.|.+ ....|..|+|.|.+.+..-.+...+ |+.++.+
T Consensus 164 ~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 239 (365)
T PRK14290 164 KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV 239 (365)
T ss_pred CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence 45789999999964211 24689999999997 5678999999999876555555553 4443333
Q ss_pred ---------------------------------------------------------EEEEEecccccCCCEEEEcCccC
Q 014884 295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN 317 (416)
Q Consensus 295 ---------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~ 317 (416)
+++|.||+|+++|++|+|+|+|.
T Consensus 240 ~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~iri~g~G~ 319 (365)
T PRK14290 240 KGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGM 319 (365)
T ss_pred ccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEEECCCCC
Confidence 68999999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEE
Q 014884 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (416)
Q Consensus 318 ~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~ 351 (416)
+...+..+|||||+|+|+.++.|++++.+|+.++
T Consensus 320 p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 320 PHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8665556899999999999999999988877653
No 58
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=5.9e-13 Score=133.09 Aligned_cols=118 Identities=29% Similarity=0.599 Sum_probs=92.1
Q ss_pred eeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE--------
Q 014884 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------- 294 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------- 294 (416)
...|+.|+|+|.... ....+|+.|+|.|.. +...|..|.|.|.+.+..-.+...+ |+..+.+
T Consensus 161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (366)
T PRK14294 161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE 236 (366)
T ss_pred cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence 468999999997431 135699999999997 4678999999998865444444432 4333322
Q ss_pred ------------------------------------------------------EEEEEecccccCCCEEEEcCccCCCC
Q 014884 295 ------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAGG 320 (416)
Q Consensus 295 ------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~~~~ 320 (416)
.++|.||+|+++|++|+|+|+|++..
T Consensus 237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~ 316 (366)
T PRK14294 237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSL 316 (366)
T ss_pred CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCC
Confidence 56899999999999999999999865
Q ss_pred CCCCCccEEEEEEEEeCCCcCCCCCceEEE
Q 014884 321 RGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (416)
Q Consensus 321 ~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~ 350 (416)
.+..+|||||+|+|..|+.|+++..+|+..
T Consensus 317 ~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 317 RGGGRGDQIIEVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred CCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 555689999999999999998888776654
No 59
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=5.3e-13 Score=133.70 Aligned_cols=120 Identities=27% Similarity=0.567 Sum_probs=93.1
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|.|.|.+.+..-..+..+ |+.++.+
T Consensus 157 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~ 232 (377)
T PRK14298 157 SPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKL 232 (377)
T ss_pred CCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEE
Confidence 3467999999996421 225689999999987 4578999999999876555555443 4433333
Q ss_pred -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
.++|.||+|+++|++++|+|+
T Consensus 233 ~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~lri~g~ 312 (377)
T PRK14298 233 SGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDK 312 (377)
T ss_pred ecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCEEEECCC
Confidence 578999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEE
Q 014884 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (416)
Q Consensus 316 G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~ 351 (416)
|.+...+...|||||+|+|..++.+++++.+|+.++
T Consensus 313 G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 313 GMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 998655556799999999999888988887765543
No 60
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.39 E-value=9.3e-13 Score=131.47 Aligned_cols=138 Identities=21% Similarity=0.458 Sum_probs=99.0
Q ss_pred EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (416)
.++.++....+..|...- .-.....|+.|+|+|.... .....|+.|.|.|.+ +...|..|+|.|.+.+.
T Consensus 139 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 214 (365)
T PRK14285 139 NNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKKK 214 (365)
T ss_pred EEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEecc
Confidence 344454454444333322 1223567999999996421 236799999999987 46789999999988654
Q ss_pred eeeEeeCC-cEEeceE---------------------------------------------------------------E
Q 014884 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (416)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (416)
.-..+..+ |+..+++ .
T Consensus 215 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~ 294 (365)
T PRK14285 215 ETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK 294 (365)
T ss_pred EEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCE
Confidence 44444443 3333322 6
Q ss_pred EEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceE
Q 014884 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (416)
Q Consensus 296 l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~ 348 (416)
++|.||+|+++|++|+|+|+|++...+...|||||+|+|+.|+.|++++..|+
T Consensus 295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l 347 (365)
T PRK14285 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL 347 (365)
T ss_pred EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence 89999999999999999999998655445699999999999999888775543
No 61
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=2.4e-13 Score=132.08 Aligned_cols=69 Identities=45% Similarity=0.719 Sum_probs=65.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
+..+|||.|||+.++|+..|||+|||++|+.+|||++..+ .+++.+|++|-+||.+|+||.+|..||..
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 4468999999999999999999999999999999999877 68999999999999999999999999986
No 62
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.37 E-value=1.2e-12 Score=131.32 Aligned_cols=140 Identities=24% Similarity=0.507 Sum_probs=100.8
Q ss_pred EEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884 208 ELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (416)
Q Consensus 208 ~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (416)
.+.++-...+..|...- .-.....|+.|+|+|.... ....+|+.|.|.|.. +...|..|.|.|.+.+..
T Consensus 136 ~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~ 211 (371)
T PRK10767 136 EIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKEK 211 (371)
T ss_pred EEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeeee
Confidence 44444454444343222 1123468999999996421 234689999999997 467899999999986655
Q ss_pred eeEeeCC-cEEeceE--------------------------------------------------------------EEE
Q 014884 281 CMTCKGS-GVVDGVK--------------------------------------------------------------EVK 297 (416)
Q Consensus 281 C~~C~g~-G~~~~~~--------------------------------------------------------------~l~ 297 (416)
...+..+ |+..+.+ .++
T Consensus 212 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~ 291 (371)
T PRK10767 212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK 291 (371)
T ss_pred eEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEE
Confidence 5555443 3322222 578
Q ss_pred EEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEE
Q 014884 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (416)
Q Consensus 298 V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~ 351 (416)
|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.|++++.+|+.++
T Consensus 292 v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 292 LKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 999999999999999999998655556899999999999888998888776553
No 63
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=4.9e-13 Score=131.33 Aligned_cols=67 Identities=36% Similarity=0.600 Sum_probs=64.4
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
..|.|.+|||++++|.++||+.||++|...|||||. .+.|+|.|+.|+.||++|+|+.+|..||...
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 579999999999999999999999999999999998 6899999999999999999999999999864
No 64
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.36 E-value=8.4e-13 Score=108.47 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=48.6
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~ 136 (416)
+...++|+||||++++|.+|||++||+|++++|||+.+ + .+.|++|++||++|.
T Consensus 62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 44579999999999999999999999999999999964 3 468999999999995
No 65
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=2.5e-13 Score=123.57 Aligned_cols=67 Identities=43% Similarity=0.759 Sum_probs=62.7
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
..|.|+||||+++++..||.+|||+||++||||++++ +++.+.|..|.+||++|.|...|..||-..
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 4699999999999999999999999999999999985 666799999999999999999999999864
No 66
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=2.6e-12 Score=128.59 Aligned_cols=136 Identities=26% Similarity=0.482 Sum_probs=95.2
Q ss_pred EEEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (416)
.++.++....+..|...-. -.....|+.|+|+|.... .....|+.|+|.|.+ +...|..|.|.|.+.+.
T Consensus 137 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 212 (373)
T PRK14301 137 VTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRV----ITHPCPKCKGSGIVQQT 212 (373)
T ss_pred EEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeee----cCCCCCCCCCCceeccc
Confidence 3444444444444433221 223468999999997421 235789999999998 45789999999988654
Q ss_pred eeeEeeCC-cEEeceE--------------------------------------------------------------EE
Q 014884 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (416)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~l 296 (416)
.-.++..+ |+..+.+ .+
T Consensus 213 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i 292 (373)
T PRK14301 213 RELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV 292 (373)
T ss_pred eEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccE
Confidence 44444432 3332222 67
Q ss_pred EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCc
Q 014884 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGAD 346 (416)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~D 346 (416)
+|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+..+..+
T Consensus 293 ~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~ 342 (373)
T PRK14301 293 TLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEE 342 (373)
T ss_pred EEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence 99999999999999999999987655568999999999988766554433
No 67
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.32 E-value=9.8e-12 Score=124.53 Aligned_cols=110 Identities=29% Similarity=0.649 Sum_probs=84.1
Q ss_pred eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE-------
Q 014884 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK------- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~------- 294 (416)
....|+.|+|+|.... ....+|+.|+|.|.+ ....|..|.|.|.+.+..-.++..+ |+..+.+
T Consensus 161 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G 236 (372)
T PRK14300 161 TVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQI----IKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEG 236 (372)
T ss_pred CCccCCCccCeEEEEEeeceEEEEEeCCCCCccceE----eCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccc
Confidence 3468999999997521 135689999999998 3578999999999865444444433 3322222
Q ss_pred --------------------------------------------------------EEEEEecccccCCCEEEEcCccCC
Q 014884 295 --------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNA 318 (416)
Q Consensus 295 --------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~~ 318 (416)
.++|.||+|+++|++|+|+|+|.+
T Consensus 237 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p 316 (372)
T PRK14300 237 EAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMS 316 (372)
T ss_pred cCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCC
Confidence 689999999999999999999998
Q ss_pred CCCCCCCccEEEEEEEEeCCCcC
Q 014884 319 GGRGRQHGNLFIKLKVADDPIFS 341 (416)
Q Consensus 319 ~~~g~~~GDl~v~i~v~~h~~f~ 341 (416)
...+..+|||||+|+|+.+..+.
T Consensus 317 ~~~~~~~GDL~V~~~v~~P~~ls 339 (372)
T PRK14300 317 KMRSTIRGDMLTHIHVEVPKNLS 339 (372)
T ss_pred CCCCCCCCCEEEEEEEECCCCCC
Confidence 65555689999999999776654
No 68
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.31 E-value=4.3e-12 Score=127.90 Aligned_cols=116 Identities=30% Similarity=0.670 Sum_probs=88.1
Q ss_pred eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE-------
Q 014884 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK------- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~------- 294 (416)
....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|.|.|.+.+..-.++..+ |+.++++
T Consensus 174 ~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G 249 (391)
T PRK14284 174 GIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYG 249 (391)
T ss_pred CCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccc
Confidence 3467999999987421 134689999999987 4568999999998765555555443 4444333
Q ss_pred ---------------------------------------------------------EEEEEecccccCCCEEEEcCccC
Q 014884 295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN 317 (416)
Q Consensus 295 ---------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~ 317 (416)
.++|.||+|+++|++++|+|+|.
T Consensus 250 ~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~ 329 (391)
T PRK14284 250 DAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGF 329 (391)
T ss_pred cCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCC
Confidence 56799999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEEeCCCcCCCCCce
Q 014884 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (416)
Q Consensus 318 ~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL 347 (416)
+...+..+|||||+|+|..+..++.+..+|
T Consensus 330 p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 359 (391)
T PRK14284 330 PNVHGKGRGDLLVRISVETPQNLSEEQKEL 359 (391)
T ss_pred CCCCCCCCCcEEEEEEEECCCCCCHHHHHH
Confidence 865555689999999999877776655444
No 69
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.31 E-value=3.7e-12 Score=127.46 Aligned_cols=116 Identities=26% Similarity=0.607 Sum_probs=88.9
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|.|.|.+ +...|..|+|.|.+.+..-..+..+ |+..+.+
T Consensus 154 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~ 229 (371)
T PRK14287 154 KPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRV 229 (371)
T ss_pred CCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEE
Confidence 3567999999997432 125689999999987 4578999999998765555555443 4333322
Q ss_pred -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
.++|.||+|+++|++++|+|+
T Consensus 230 ~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ri~g~ 309 (371)
T PRK14287 230 SGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGK 309 (371)
T ss_pred ccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCcEEEEcCC
Confidence 678999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEEEeCCCcCCCCCce
Q 014884 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (416)
Q Consensus 316 G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL 347 (416)
|.+...+...|||||+|+|..++.++++...|
T Consensus 310 G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l 341 (371)
T PRK14287 310 GVPNVHGRGQGDQHVQVRVVTPKNLTEKEKEL 341 (371)
T ss_pred CccCCCCCCCCCEEEEEEEEcCCCCCHHHHHH
Confidence 99865555679999999999888776655443
No 70
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.30 E-value=1.8e-11 Score=122.41 Aligned_cols=112 Identities=24% Similarity=0.525 Sum_probs=86.6
Q ss_pred eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE-------
Q 014884 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK------- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~------- 294 (416)
....|+.|+|+|.... ....+|+.|.|.|.+ +...|..|.|.|.+.+..-.+...+ |+.++++
T Consensus 155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G 230 (369)
T PRK14288 155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKG 230 (369)
T ss_pred CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCc
Confidence 4578999999996421 224589999999997 4577999999999876555555553 4433332
Q ss_pred -------------------------------------------------------EEEEEecccccCCCEEEEcCccCCC
Q 014884 295 -------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAG 319 (416)
Q Consensus 295 -------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~~~ 319 (416)
.++|.||+|+++|++++|+|+|.+.
T Consensus 231 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~ 310 (369)
T PRK14288 231 NEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKH 310 (369)
T ss_pred cCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCC
Confidence 5899999999999999999999986
Q ss_pred CCCCCCccEEEEEEEEeCCCcCCC
Q 014884 320 GRGRQHGNLFIKLKVADDPIFSRD 343 (416)
Q Consensus 320 ~~g~~~GDl~v~i~v~~h~~f~r~ 343 (416)
..+...|||||+|+|+.+..+..+
T Consensus 311 ~~~~~~GDL~v~~~v~~P~~ls~~ 334 (369)
T PRK14288 311 PESSYRGSLIVELQVIYPKSLNKE 334 (369)
T ss_pred CCCCCCCCEEEEEEEECCCCCCHH
Confidence 544446999999999987766543
No 71
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.29 E-value=6.3e-12 Score=125.36 Aligned_cols=114 Identities=34% Similarity=0.655 Sum_probs=84.4
Q ss_pred eeecCCCCCCCCCC---------CCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884 229 FVPCDSCHGRGFPA---------DAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (416)
Q Consensus 229 ~~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (416)
...|..|+|+|... .....+|+.|.|.|.+ +...|..|.|.|.+.+..-.....+ |+..+++
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~ 235 (354)
T TIGR02349 160 PKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKI----IKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS 235 (354)
T ss_pred CccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCccee----cCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEe
Confidence 56799999998632 1235699999999997 4567999999998754332222221 2221111
Q ss_pred ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (416)
Q Consensus 295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G 316 (416)
.++|.||+|+++|++++|+|+|
T Consensus 236 g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~g~G 315 (354)
T TIGR02349 236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKG 315 (354)
T ss_pred cCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCcEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEEeCCCcCCCCCc
Q 014884 317 NAGGRGRQHGNLFIKLKVADDPIFSRDGAD 346 (416)
Q Consensus 317 ~~~~~g~~~GDl~v~i~v~~h~~f~r~G~D 346 (416)
++...+..+|||||+|+|..++.++.+..+
T Consensus 316 ~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~ 345 (354)
T TIGR02349 316 VPRLRGNGRGDLLVTVKVETPKNLSKEQKE 345 (354)
T ss_pred cCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence 986655578999999999988777665544
No 72
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.28 E-value=1.9e-11 Score=122.64 Aligned_cols=127 Identities=30% Similarity=0.555 Sum_probs=89.2
Q ss_pred EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (416)
.++.++-...+..|...- .-.....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|.|.|.
T Consensus 132 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 207 (378)
T PRK14278 132 KQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEV----IPDPCHECAGDGR 207 (378)
T ss_pred EEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCcccee----eCCCCCCCCCcee
Confidence 344455555444333221 1223568999999997421 125689999999998 4567999999998
Q ss_pred EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (416)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (416)
+.+..-..+..+ |+..+++
T Consensus 208 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 287 (378)
T PRK14278 208 VRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI 287 (378)
T ss_pred EecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecC
Confidence 765444444432 3333222
Q ss_pred ---EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (416)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h 337 (416)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-.
T Consensus 288 d~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P 333 (378)
T PRK14278 288 LDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVP 333 (378)
T ss_pred CCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcC
Confidence 6789999999999999999999986555568999999999843
No 73
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=2.8e-11 Score=121.96 Aligned_cols=127 Identities=28% Similarity=0.552 Sum_probs=89.7
Q ss_pred EEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884 208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (416)
Q Consensus 208 ~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (416)
++.++-...+.-|...-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|.|.|.+.+..
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----i~~~C~~C~G~g~v~~~~ 242 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSI----IEDPCEECKGTGVTTRTR 242 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEE----eCCcCCCCCCCeEEEEee
Confidence 444555555443332221 124578999999997532 235799999999998 457899999999886544
Q ss_pred eeEeeCC-cEEeceE--------------------------------------------------------------EEE
Q 014884 281 CMTCKGS-GVVDGVK--------------------------------------------------------------EVK 297 (416)
Q Consensus 281 C~~C~g~-G~~~~~~--------------------------------------------------------------~l~ 297 (416)
-.+...+ |+..+++ .++
T Consensus 243 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~ 322 (392)
T PRK14279 243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVG 322 (392)
T ss_pred eeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEE
Confidence 4444432 3332222 678
Q ss_pred EEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCC
Q 014884 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (416)
Q Consensus 298 V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~ 339 (416)
|.||+|+++|++|+|+|+|++.. +...|||||+|+|.-+..
T Consensus 323 v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~ 363 (392)
T PRK14279 323 VKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPN 363 (392)
T ss_pred EEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCC
Confidence 99999999999999999999863 456899999999995543
No 74
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=3.3e-11 Score=121.69 Aligned_cols=107 Identities=33% Similarity=0.605 Sum_probs=82.3
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.+.+..-..+..+ |+.++++
T Consensus 178 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 253 (397)
T PRK14281 178 ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRV----VKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTL 253 (397)
T ss_pred CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeee----eCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEE
Confidence 4568999999997421 125689999999998 4568999999999866544455443 4333332
Q ss_pred -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
.++|.||+|+++|++++|+|+
T Consensus 254 ~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G~~~ri~g~ 333 (397)
T PRK14281 254 RGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGK 333 (397)
T ss_pred ecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCCcEEEEcCC
Confidence 578999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEEEeCC
Q 014884 316 GNAGGRGRQHGNLFIKLKVADDP 338 (416)
Q Consensus 316 G~~~~~g~~~GDl~v~i~v~~h~ 338 (416)
|.+...+...|||||+|+|.-..
T Consensus 334 G~P~~~~~~~GDL~V~~~V~~P~ 356 (397)
T PRK14281 334 GIGHLRGSGRGDQYVRVNVFVPK 356 (397)
T ss_pred CCCCCCCCCCCCEEEEEEEEcCC
Confidence 99865555679999999998443
No 75
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=3.5e-11 Score=120.74 Aligned_cols=108 Identities=29% Similarity=0.613 Sum_probs=81.7
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.+.+..-..+..+ |+..+.+
T Consensus 159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l 234 (376)
T PRK14280 159 SKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRV 234 (376)
T ss_pred CCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEE
Confidence 3567999999996421 135689999999987 4577999999998865444444332 3333222
Q ss_pred -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
.++|.||+|+++|++++|+|+
T Consensus 235 ~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~~~~i~g~ 314 (376)
T PRK14280 235 SGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGK 314 (376)
T ss_pred cccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCcEEEEcCC
Confidence 678999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEEEeCCC
Q 014884 316 GNAGGRGRQHGNLFIKLKVADDPI 339 (416)
Q Consensus 316 G~~~~~g~~~GDl~v~i~v~~h~~ 339 (416)
|.+...+...|||||+|+|.....
T Consensus 315 G~p~~~~~~~GDL~v~~~v~~P~~ 338 (376)
T PRK14280 315 GVPNVRGYGQGDQYVVVRVVTPTK 338 (376)
T ss_pred CCCCCCCCCCCCEEEEEEEECCCC
Confidence 998654556799999999995543
No 76
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.25 E-value=2.6e-11 Score=121.84 Aligned_cols=107 Identities=29% Similarity=0.633 Sum_probs=82.9
Q ss_pred eeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (416)
...|+.|+|+|.... ....+|+.|+|.|.+ +...|..|.|.|.+.+..-..+..+ |+..+.+
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~ 238 (380)
T PRK14276 163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQ 238 (380)
T ss_pred CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEe
Confidence 468999999997421 125689999999987 4578999999999866555555543 4433333
Q ss_pred ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (416)
Q Consensus 295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G 316 (416)
.++|.||+|+++|++++|+|+|
T Consensus 239 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~~~~i~g~G 318 (380)
T PRK14276 239 GQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKG 318 (380)
T ss_pred ccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCCEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEEeCCC
Q 014884 317 NAGGRGRQHGNLFIKLKVADDPI 339 (416)
Q Consensus 317 ~~~~~g~~~GDl~v~i~v~~h~~ 339 (416)
.+...+..+|||||+|+|.-...
T Consensus 319 ~p~~~~~~~GDL~V~~~v~~P~~ 341 (380)
T PRK14276 319 APKLRGGGNGDQHVTVNIVTPTK 341 (380)
T ss_pred cCCCCCCCCCCEEEEEEEECCCC
Confidence 98755556799999999995443
No 77
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.25 E-value=7.4e-12 Score=119.50 Aligned_cols=59 Identities=39% Similarity=0.605 Sum_probs=52.3
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C----hhHHHHHHHHHHHHHHhhh
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---N----PSAKRKFQEIRDAYETLRD 137 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~----~~a~~~f~~i~~Ay~~L~d 137 (416)
+...++|+||||++++|.+|||+|||+|+++||||+..+ + +.|+++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 345799999999999999999999999999999999643 1 3488999999999999986
No 78
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.25 E-value=1.7e-11 Score=122.79 Aligned_cols=130 Identities=25% Similarity=0.457 Sum_probs=88.4
Q ss_pred EEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884 208 ELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (416)
Q Consensus 208 ~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (416)
++.++....+..|...- .-.....|+.|+|+|.... .....|+.|+|+|.+ +...|..|+|.|.+.+..
T Consensus 144 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~ 219 (372)
T PRK14286 144 KIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTV----ISNPCKTCGGQGLQEKRR 219 (372)
T ss_pred EEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeE----ecccCCCCCCCcEEecce
Confidence 44454444443333221 1123467999999996421 235689999999998 456899999999876543
Q ss_pred eeEeeCC-cEEeceE---------------------------------------------------------------EE
Q 014884 281 CMTCKGS-GVVDGVK---------------------------------------------------------------EV 296 (416)
Q Consensus 281 C~~C~g~-G~~~~~~---------------------------------------------------------------~l 296 (416)
-..+..+ |+..+.+ .+
T Consensus 220 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i 299 (372)
T PRK14286 220 TINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKA 299 (372)
T ss_pred EEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEE
Confidence 3333322 2221111 58
Q ss_pred EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcC
Q 014884 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFS 341 (416)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~ 341 (416)
+|.||+|+++|++++|+|+|.+...+...|||||+|+|.-+..+.
T Consensus 300 ~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls 344 (372)
T PRK14286 300 KMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKIT 344 (372)
T ss_pred EEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCC
Confidence 999999999999999999999865545679999999999555443
No 79
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=2.2e-11 Score=122.17 Aligned_cols=118 Identities=25% Similarity=0.468 Sum_probs=87.9
Q ss_pred eeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (416)
...|+.|+|+|.... .....|+.|.|.|.+ +...|..|.|.|.+.+..-..+..+ |+..+++
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~ 235 (374)
T PRK14293 160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS 235 (374)
T ss_pred CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEc
Confidence 467999999997421 124689999999997 4568999999998754333333321 2221111
Q ss_pred ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (416)
Q Consensus 295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G 316 (416)
.++|.||+|+++|++++|+|+|
T Consensus 236 g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G 315 (374)
T PRK14293 236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKG 315 (374)
T ss_pred cCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCC
Confidence 5789999999999999999999
Q ss_pred CCCCCC-CCCccEEEEEEEEeCCCcCCCCCceEEE
Q 014884 317 NAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVD 350 (416)
Q Consensus 317 ~~~~~g-~~~GDl~v~i~v~~h~~f~r~G~DL~~~ 350 (416)
.+...+ ...|||||+|+|..++.+++++.+|+..
T Consensus 316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~ 350 (374)
T PRK14293 316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEK 350 (374)
T ss_pred CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 986543 2479999999999888888888776544
No 80
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=5.8e-11 Score=119.37 Aligned_cols=106 Identities=29% Similarity=0.564 Sum_probs=83.3
Q ss_pred eeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE----
Q 014884 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK---- 294 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~---- 294 (416)
...|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.+.+..-.....+ |+..+.+
T Consensus 165 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~ 240 (380)
T PRK14297 165 PKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLR 240 (380)
T ss_pred CccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEe
Confidence 568999999996421 235699999999987 4578999999998766555565554 4443333
Q ss_pred ----------------------------------------------------------EEEEEecccccCCCEEEEcCcc
Q 014884 295 ----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (416)
Q Consensus 295 ----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G 316 (416)
.++|.||+|+++|++++|+|+|
T Consensus 241 g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~~~ri~g~G 320 (380)
T PRK14297 241 GQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKG 320 (380)
T ss_pred cCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCCEEEEcCCC
Confidence 6789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEEeCC
Q 014884 317 NAGGRGRQHGNLFIKLKVADDP 338 (416)
Q Consensus 317 ~~~~~g~~~GDl~v~i~v~~h~ 338 (416)
.+...+...|||||+|+|.-..
T Consensus 321 ~p~~~~~~~GDL~v~~~v~~P~ 342 (380)
T PRK14297 321 VPRVNSTGRGNQYVTVIVDIPK 342 (380)
T ss_pred cCCCCCCCCCcEEEEEEEEcCC
Confidence 9865555679999999999433
No 81
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=5.7e-11 Score=119.13 Aligned_cols=113 Identities=27% Similarity=0.574 Sum_probs=84.7
Q ss_pred eeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|..|+|+|..... ....|+.|+|.|.. +...|..|.|.|.+.+..-..+..+ |+..+.+
T Consensus 156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~ 231 (371)
T PRK14292 156 PPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV 231 (371)
T ss_pred CCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEE
Confidence 36789999999965311 24689999999987 5688999999998754333333332 3222221
Q ss_pred ---------------------------------------------------------EEEEEecccccCCCEEEEcCccC
Q 014884 295 ---------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGN 317 (416)
Q Consensus 295 ---------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~G~ 317 (416)
.++|.||+|+++|++++|+|+|.
T Consensus 232 ~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~ 311 (371)
T PRK14292 232 AGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGM 311 (371)
T ss_pred ecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEEEECCCCC
Confidence 35799999999999999999999
Q ss_pred CCCCCCCCccEEEEEEEEeCCCcCCCC
Q 014884 318 AGGRGRQHGNLFIKLKVADDPIFSRDG 344 (416)
Q Consensus 318 ~~~~g~~~GDl~v~i~v~~h~~f~r~G 344 (416)
+...+..+|||||+|+|+.++.+..+-
T Consensus 312 p~~~~~~~GDL~V~~~v~~P~~l~~~q 338 (371)
T PRK14292 312 PRLQGAGTGDLIVEYEIAVPKQLSPEA 338 (371)
T ss_pred CCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 876566689999999999887765544
No 82
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.22 E-value=4.1e-11 Score=120.78 Aligned_cols=126 Identities=25% Similarity=0.516 Sum_probs=89.7
Q ss_pred EEEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (416)
.++.++-...+..|...-. -.....|+.|+|+|..... ....|+.|.|.|.+ ....|..|+|.|.
T Consensus 147 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 222 (386)
T PRK14289 147 KKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEGI 222 (386)
T ss_pred EEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCcE
Confidence 3445555555544433322 2345789999999975321 25689999999987 4578999999998
Q ss_pred EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (416)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (416)
+.+..-..+..+ |+..+.+
T Consensus 223 v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l 302 (386)
T PRK14289 223 VYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTI 302 (386)
T ss_pred EeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecC
Confidence 765444444332 3322222
Q ss_pred --EEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEe
Q 014884 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVAD 336 (416)
Q Consensus 295 --~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~ 336 (416)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|+-
T Consensus 303 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~ 346 (386)
T PRK14289 303 DGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYI 346 (386)
T ss_pred CceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEe
Confidence 689999999999999999999998655556899999999983
No 83
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=6.3e-11 Score=119.29 Aligned_cols=125 Identities=27% Similarity=0.530 Sum_probs=87.9
Q ss_pred EEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884 208 ELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (416)
Q Consensus 208 ~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (416)
++.++-...+.-|...-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|.|.|.+.+..
T Consensus 160 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~~~~~~ 235 (389)
T PRK14295 160 PLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLI----ADDPCLVCKGSGRAKSSR 235 (389)
T ss_pred EEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEE----eccCCCCCCCCceEeeee
Confidence 444444444443332221 123478999999986421 235689999999998 457899999999886544
Q ss_pred eeEeeCC-cEEeceE---------------------------------------------------------------EE
Q 014884 281 CMTCKGS-GVVDGVK---------------------------------------------------------------EV 296 (416)
Q Consensus 281 C~~C~g~-G~~~~~~---------------------------------------------------------------~l 296 (416)
-.+...+ |+..+++ .+
T Consensus 236 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~ 315 (389)
T PRK14295 236 TMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPV 315 (389)
T ss_pred EEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEE
Confidence 4444432 3333222 68
Q ss_pred EEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (416)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h 337 (416)
+|.||+|+++|++|+|+|+|.+.. +...|||||+|+|.-.
T Consensus 316 ~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P 355 (389)
T PRK14295 316 TVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVP 355 (389)
T ss_pred EEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECC
Confidence 999999999999999999999863 4568999999999843
No 84
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=9e-11 Score=118.16 Aligned_cols=106 Identities=32% Similarity=0.654 Sum_probs=80.7
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.+.+..-.++..+ |+..+.+
T Consensus 171 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~ 246 (386)
T PRK14277 171 KPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITL 246 (386)
T ss_pred CCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEE
Confidence 3568999999986421 124689999999998 4578999999999865544455433 3333222
Q ss_pred -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
.++|.||+|+++|++++|+|+
T Consensus 247 ~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~ 326 (386)
T PRK14277 247 RGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGK 326 (386)
T ss_pred ccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCCEEEECCC
Confidence 468899999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEEEeC
Q 014884 316 GNAGGRGRQHGNLFIKLKVADD 337 (416)
Q Consensus 316 G~~~~~g~~~GDl~v~i~v~~h 337 (416)
|.+...+...|||||+|+|.-.
T Consensus 327 G~p~~~~~~~GDL~v~~~V~~P 348 (386)
T PRK14277 327 GIPHLRGRGRGDQIVKVYIEVP 348 (386)
T ss_pred CCCCCCCCCCCCEEEEEEEEeC
Confidence 9986544567999999999843
No 85
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=7.5e-11 Score=118.58 Aligned_cols=126 Identities=30% Similarity=0.545 Sum_probs=89.1
Q ss_pred EEEEeeeeecccCcceee--eeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~--~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (416)
.++.++-...+..|...- .-.....|+.|+|+|.... ....+|+.|+|.|.+ ...|..|+|.|.+.+.
T Consensus 149 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----~~~C~~C~G~g~v~~~ 223 (382)
T PRK14291 149 VSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----REPCSKCNGRGLVIKK 223 (382)
T ss_pred EEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----ccCCCCCCCCceEEee
Confidence 344444454444333221 1233567999999996421 235689999999953 5689999999988665
Q ss_pred eeeEeeCC-cEEeceE---------------------------------------------------------------E
Q 014884 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (416)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (416)
.-.+...+ |+.++++ .
T Consensus 224 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~ 303 (382)
T PRK14291 224 ETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKK 303 (382)
T ss_pred eEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCE
Confidence 55555443 4433332 6
Q ss_pred EEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (416)
Q Consensus 296 l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h 337 (416)
++|.||+|+++|++|+|+|+|++...+..+|||||+|+|.-.
T Consensus 304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P 345 (382)
T PRK14291 304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP 345 (382)
T ss_pred EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence 899999999999999999999987655568999999999843
No 86
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=8.3e-11 Score=117.74 Aligned_cols=128 Identities=20% Similarity=0.481 Sum_probs=87.8
Q ss_pred EEEEeeeeecccCcceeee--eeeeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCceE
Q 014884 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (416)
..+.++-...+..|...-. -.....|+.|+|+|..... ...+|+.|+|+|.+ +...|..|.|.|.
T Consensus 142 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 217 (372)
T PRK14296 142 KIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGK 217 (372)
T ss_pred EEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceE
Confidence 3444444444444433221 1235679999999975321 24689999999998 4678999999998
Q ss_pred EeeeeeeEeeCC-cEEeceE------------------------------------------------------------
Q 014884 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (416)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (416)
+.+..-.++..+ |+..+.+
T Consensus 218 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~t 297 (372)
T PRK14296 218 YLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKT 297 (372)
T ss_pred EEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeC
Confidence 755444444332 3332222
Q ss_pred ---EEEEEecccccCCCEEEEcCccCCCC-CCCCCccEEEEEEEEeCC
Q 014884 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGG-RGRQHGNLFIKLKVADDP 338 (416)
Q Consensus 295 ---~l~V~Ip~G~~~G~~i~~~g~G~~~~-~g~~~GDl~v~i~v~~h~ 338 (416)
.++|.||+|+++|++++|+|+|.+.. .+...|||||+|+|.-..
T Consensus 298 ldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~ 345 (372)
T PRK14296 298 LDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK 345 (372)
T ss_pred CCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 67899999999999999999999733 233579999999999433
No 87
>PHA02624 large T antigen; Provisional
Probab=99.19 E-value=1.6e-11 Score=126.67 Aligned_cols=60 Identities=28% Similarity=0.557 Sum_probs=56.2
Q ss_pred cCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhh
Q 014884 81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144 (416)
Q Consensus 81 ~~~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~y 144 (416)
..++|++|||+++| +.+|||+|||++|++||||++++ +++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 36899999999999 99999999999999999999753 58999999999999999999998
No 88
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=1.3e-10 Score=116.85 Aligned_cols=105 Identities=32% Similarity=0.649 Sum_probs=78.6
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|.|.|.. ....|..|.|.|.+.+..-..+..+ |+..+.+
T Consensus 162 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l 237 (378)
T PRK14283 162 EVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV 237 (378)
T ss_pred CCccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence 3467999999997531 124689999999987 4578999999998765444444332 2211111
Q ss_pred -----------------------------------------------------------EEEEEecccccCCCEEEEcCc
Q 014884 295 -----------------------------------------------------------EVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
.++|.||+|+++|++++|+|+
T Consensus 238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~ 317 (378)
T PRK14283 238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGH 317 (378)
T ss_pred eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCC
Confidence 578999999999999999999
Q ss_pred cCCCCCCCCCccEEEEEEEEe
Q 014884 316 GNAGGRGRQHGNLFIKLKVAD 336 (416)
Q Consensus 316 G~~~~~g~~~GDl~v~i~v~~ 336 (416)
|.+...+...|||||+|+|.-
T Consensus 318 G~p~~~~~~~GdL~v~~~v~~ 338 (378)
T PRK14283 318 GMPSLRWSGKGNLYVKVKVVV 338 (378)
T ss_pred CCCCCCCCCCCCEEEEEEEEe
Confidence 998654456799999999983
No 89
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.18 E-value=4.1e-11 Score=106.65 Aligned_cols=67 Identities=27% Similarity=0.421 Sum_probs=58.1
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
.|||++||+++. .+..+++++|++|++++|||+..+.++ +.+.-..||+||.+|+||.+|+.|=-..
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L 75 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIAL 75 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHh
Confidence 589999999985 899999999999999999999876543 4455678999999999999999996543
No 90
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.15 E-value=1.8e-10 Score=116.60 Aligned_cols=108 Identities=27% Similarity=0.565 Sum_probs=83.2
Q ss_pred eeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC-cEEeceE---
Q 014884 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (416)
....|+.|+|+|.... ....+|+.|+|+|.+.. ....|..|+|.|.+.+..-.++..+ |+.++.+
T Consensus 165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~ 242 (421)
T PTZ00037 165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF 242 (421)
T ss_pred CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence 4578999999996321 23568999999998742 2468999999999876655666554 5554443
Q ss_pred -----------------------------------------------------------EEEEEeccc--ccCCCEEEEc
Q 014884 295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP 313 (416)
Q Consensus 295 -----------------------------------------------------------~l~V~Ip~G--~~~G~~i~~~ 313 (416)
.++|.|||| +++|++++|+
T Consensus 243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~ 322 (421)
T PTZ00037 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN 322 (421)
T ss_pred ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence 689999999 9999999999
Q ss_pred CccCCCCCC-CCCccEEEEEEEEeC
Q 014884 314 EAGNAGGRG-RQHGNLFIKLKVADD 337 (416)
Q Consensus 314 g~G~~~~~g-~~~GDl~v~i~v~~h 337 (416)
|+|.+...+ ...|||||+|+|.-.
T Consensus 323 geGmP~~~~~~~rGDL~V~~~V~~P 347 (421)
T PTZ00037 323 NEGMPTYKSPFKKGNLYVTFEVIFP 347 (421)
T ss_pred CCCcccCCCCCCCCCEEEEEEEEcC
Confidence 999986443 357999999999843
No 91
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=99.09 E-value=4.1e-11 Score=89.75 Aligned_cols=57 Identities=49% Similarity=1.036 Sum_probs=44.5
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCCCCceEEe-eeeeeEeeCCc
Q 014884 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG 288 (416)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~-~~~C~~C~g~G 288 (416)
|+.|+|+|........+|+.|+|+|+++.. .++++|+.|+|+|+++ +++|+.|+|.|
T Consensus 1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g 66 (66)
T PF00684_consen 1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG 66 (66)
T ss_dssp -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence 899999999888899999999999997642 2378999999999999 99999999975
No 92
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.08 E-value=9.3e-11 Score=114.76 Aligned_cols=70 Identities=33% Similarity=0.640 Sum_probs=63.7
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHHhhhhhhhhhhcccccC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~ 150 (416)
.-|+|||||++.+++..+||++||+|..++||||.+. ..+-+|++++|++||+.|+|...|+.|-.+|..
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 3599999999999999999999999999999999775 245789999999999999999999999998643
No 93
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.04 E-value=3.1e-10 Score=99.78 Aligned_cols=57 Identities=26% Similarity=0.435 Sum_probs=49.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 93 ~a~~~eik~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
+.+..+|+++||+|++++|||+..+.. .+.+.|+.||+||++|+||.+|+.|+-...
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 357889999999999999999965432 267889999999999999999999998643
No 94
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=2.2e-09 Score=94.71 Aligned_cols=66 Identities=26% Similarity=0.540 Sum_probs=59.5
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDR 146 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 146 (416)
.-|+|+||.|.++.+.++||+.||+|....|||+|+++ +.|...|.-|.+||..|-|+..|..-+.
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~~ 118 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCLD 118 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 46999999999999999999999999999999999988 5689999999999999999986654444
No 95
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.81 E-value=1.5e-08 Score=98.38 Aligned_cols=66 Identities=35% Similarity=0.630 Sum_probs=59.8
Q ss_pred cCCCCCceEEEEecCHHHHhcCCeeEEecCCC-eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN 413 (416)
Q Consensus 340 f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg-~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~ 413 (416)
+.|+|.||++++.|+|.||++|+++.| ++++ .++|+||+|+++|++++++|+|++. |||||+|+|.
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~ 191 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLL 191 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEc
Confidence 357899999999999999999999998 5667 5899999999999999999999862 9999999886
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=9.4e-09 Score=94.77 Aligned_cols=73 Identities=34% Similarity=0.428 Sum_probs=62.7
Q ss_pred CCCCcCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 77 CYSSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDAN--KNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 77 ~~~~~~~~y~iLgv~~---~a~~~eik~ayr~la~~~HPD~~--~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
..+...|+|.+|||+. .+++.+|.+|.++.+.+||||+. +++....+.|+.|+.||+||+|+.+|.+||....
T Consensus 38 k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df 115 (379)
T COG5269 38 KNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF 115 (379)
T ss_pred hhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence 3456689999999987 68889999999999999999996 2234457899999999999999999999999643
No 97
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.69 E-value=5.2e-08 Score=95.29 Aligned_cols=71 Identities=25% Similarity=0.491 Sum_probs=59.2
Q ss_pred CCCCceEEEEecCHHHHhcCCeeEE----ecCC--C--------eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEE
Q 014884 342 RDGADVYVDSNISFTQAILGGKVDV----PTLS--G--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY 407 (416)
Q Consensus 342 r~G~DL~~~~~I~l~~Al~G~~~~i----~~ld--g--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~ 407 (416)
++|.||++++.|+|.||+.|+.++| ++.+ | .++|+||+|+++|++++++|+|+|.... ..+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence 5689999999999999999996555 4343 3 3688999999999999999999996532 3469999
Q ss_pred EEEEEE
Q 014884 408 VRFRVN 413 (416)
Q Consensus 408 v~~~v~ 413 (416)
|+|+|.
T Consensus 194 v~i~v~ 199 (306)
T PRK10266 194 LVIHIA 199 (306)
T ss_pred EEEEEc
Confidence 999987
No 98
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.63 E-value=5.8e-08 Score=75.82 Aligned_cols=45 Identities=29% Similarity=0.608 Sum_probs=35.3
Q ss_pred EEEEEEecccccCCCEEEEcCccCCCCCCC-CCccEEEEEEEEeCC
Q 014884 294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADDP 338 (416)
Q Consensus 294 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~-~~GDl~v~i~v~~h~ 338 (416)
+.++|.||+|+++|++++++|+|.+...+. ..|||||+++|.-..
T Consensus 27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~ 72 (81)
T PF01556_consen 27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK 72 (81)
T ss_dssp -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 478899999999999999999999765554 799999999998433
No 99
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=98.33 E-value=3.1e-07 Score=75.18 Aligned_cols=56 Identities=39% Similarity=0.901 Sum_probs=45.9
Q ss_pred eeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--C---CcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P---FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~---~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (416)
..+.|..|+|+|. ..|+.|+|+|.+... + ++.+|+.|+|.|+. .|..|+|.|++..
T Consensus 40 ~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~ 100 (111)
T PLN03165 40 NTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR 100 (111)
T ss_pred cCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence 4578999999997 389999999997542 2 36799999999975 4999999987653
No 100
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=6.9e-07 Score=95.51 Aligned_cols=58 Identities=29% Similarity=0.477 Sum_probs=48.2
Q ss_pred CCCCcCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 014884 77 CYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (416)
Q Consensus 77 ~~~~~~~~y~iLgv~~~----a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d 137 (416)
..+...+.|+||.|+-+ -..+.||++|++||.+||||||+ +-.++|..+|+|||.|+.
T Consensus 1276 ~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1276 ATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred CccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHHH
Confidence 34556689999998752 24478999999999999999985 458999999999999983
No 101
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=9.7e-07 Score=79.84 Aligned_cols=56 Identities=38% Similarity=0.700 Sum_probs=49.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-Hhhhh
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS 138 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~-~L~d~ 138 (416)
..+|.+|||..+|+.+|++.||.+||+++|||.... ....++|.+|.+||. ||+..
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999864 344578999999999 88754
No 102
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=1.6e-06 Score=84.16 Aligned_cols=42 Identities=33% Similarity=0.464 Sum_probs=37.2
Q ss_pred EEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC
Q 014884 295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (416)
Q Consensus 295 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h 337 (416)
.+++.++|| +.+|++.++.|+|++..... .|||||.+.|+-.
T Consensus 280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp 323 (337)
T KOG0712|consen 280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFP 323 (337)
T ss_pred eEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcC
Confidence 788999999 99999999999999976554 9999999999843
No 103
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=98.10 E-value=2.6e-06 Score=76.35 Aligned_cols=48 Identities=35% Similarity=0.663 Sum_probs=39.5
Q ss_pred ccCCCCCCceEEee--eeeeEeeCCcEEeceEEEEEEecccccCCCEEEEc
Q 014884 265 STCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (416)
Q Consensus 265 ~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~ 313 (416)
.+|+.|+|+|++++ ++|+.|+|.|.+..++.+.+.+ .|+.+|++|++.
T Consensus 100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 100 CKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 45666777777775 6788888888888899999999 999999999875
No 104
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.97 E-value=9.8e-06 Score=64.73 Aligned_cols=59 Identities=27% Similarity=0.360 Sum_probs=49.3
Q ss_pred CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 014884 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (416)
Q Consensus 76 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~ 138 (416)
.+.+..+..-.||||+++++.+.||.|+|+.....|||+.++.--| .+||||+++|...
T Consensus 50 ~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlA----sKINEAKdlLe~~ 108 (112)
T KOG0723|consen 50 EPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLA----SKINEAKDLLEGT 108 (112)
T ss_pred ccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHH----HHHHHHHHHHhcc
Confidence 3456667888999999999999999999999999999999863233 3599999999753
No 105
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.94 E-value=3.7e-05 Score=81.31 Aligned_cols=70 Identities=50% Similarity=0.816 Sum_probs=65.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~ 152 (416)
.|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..|.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 599999999999999999999999999999999875 7788999999999999999999999999876553
No 106
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=1.5e-05 Score=68.15 Aligned_cols=69 Identities=26% Similarity=0.470 Sum_probs=55.2
Q ss_pred CCcCCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCC-----hhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 79 SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNN-----PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 79 ~~~~~~y~iLgv~~--~a~~~eik~ayr~la~~~HPD~~~~~-----~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
....+||.+||... ...+..++.-|....+++|||+.... ..|.+...+||+||.+|.||.+|+.|=.-
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34578999998654 45666677799999999999995432 13678899999999999999999999653
No 107
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=97.38 E-value=0.00011 Score=75.15 Aligned_cols=58 Identities=31% Similarity=0.763 Sum_probs=28.6
Q ss_pred ecCCCCCCCCCCCCcccccCCCcceeEEEeC-----------------CCcccCCCCCCceEEe-eeeeeEeeCCcE
Q 014884 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----------------PFTSTCSTCKGLGRII-KDHCMTCKGSGV 289 (416)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----------------~~~~~C~~C~G~G~~~-~~~C~~C~g~G~ 289 (416)
.|+.|+|.|... .....|+.|+|+|..... .+..+|..|+|+|.+. -..|..|.|.|.
T Consensus 4 ~C~~C~g~G~i~-v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gk 79 (715)
T COG1107 4 KCPECGGKGKIV-VGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGK 79 (715)
T ss_pred cccccCCCceEe-eeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCcee
Confidence 466666655432 223456666666653100 0133566666666553 355666655544
No 108
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=97.36 E-value=9.1e-05 Score=55.34 Aligned_cols=44 Identities=32% Similarity=0.778 Sum_probs=31.5
Q ss_pred eeeecCCCCCCCCCCCC---------cccccCCCcceeEEEeCCCcccCCCCCCce
Q 014884 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (416)
....|+.|+|+|..... ...+|+.|+|+|.++ ...+|..|+|.|
T Consensus 14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i---~~~~C~~C~G~g 66 (66)
T PF00684_consen 14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII---EKDPCKTCKGSG 66 (66)
T ss_dssp T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE----TSSB-SSSTTSS
T ss_pred CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE---CCCCCCCCCCcC
Confidence 34689999999986322 257999999999983 278999999986
No 109
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.75 E-value=0.0013 Score=58.98 Aligned_cols=69 Identities=32% Similarity=0.526 Sum_probs=54.8
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 83 ~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
+++..+|..+.+ ..+.++..|+.+++.+|||+....+. +.+.+..+|.||.+|.||.+|+.|=..-..|
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 456667776644 45669999999999999999876543 4457889999999999999999997765444
No 110
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=96.56 E-value=0.0018 Score=61.69 Aligned_cols=31 Identities=39% Similarity=0.867 Sum_probs=19.9
Q ss_pred cCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEE
Q 014884 266 TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299 (416)
Q Consensus 266 ~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~ 299 (416)
.|.+|.|.|. .+|.+|.|.|.+..-..+.|.
T Consensus 247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~ 277 (406)
T KOG2813|consen 247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVY 277 (406)
T ss_pred cCCcccCCCC---cccccccCccceeeeEEEEEE
Confidence 5666666664 478888888776655444443
No 111
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=96.53 E-value=0.0016 Score=53.52 Aligned_cols=41 Identities=34% Similarity=0.764 Sum_probs=32.6
Q ss_pred ecCCCCCCCCCCC------CcccccCCCcceeEEEeCCCcccCCCCCCceEEee
Q 014884 231 PCDSCHGRGFPAD------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (416)
Q Consensus 231 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (416)
.|+.|+|+|.... .....|+.|+|+|.. .|..|.|.|.+.+
T Consensus 54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~ 100 (111)
T PLN03165 54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR 100 (111)
T ss_pred CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence 8999999987531 125689999999974 4999999998764
No 112
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.27 E-value=0.0023 Score=57.32 Aligned_cols=54 Identities=43% Similarity=0.632 Sum_probs=46.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--Ch-----hHHHHHHHHHHHHHHh
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--NP-----SAKRKFQEIRDAYETL 135 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~-----~a~~~f~~i~~Ay~~L 135 (416)
.+.|.+|++...++..+|+++|+++...+|||+-.. .+ .+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999998432 12 3788899999999853
No 113
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=96.12 E-value=0.0047 Score=63.54 Aligned_cols=46 Identities=41% Similarity=0.928 Sum_probs=35.0
Q ss_pred eeecCCCCCCCCCCCCc------------------ccccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884 229 FVPCDSCHGRGFPADAK------------------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~~~------------------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (416)
...|+-|+|+|....-. -..|+.|+|.|.+. ...+|+.|+|+|++.
T Consensus 18 ~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~---v~~~c~~c~G~gkv~ 81 (715)
T COG1107 18 EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVT---VYDTCPECGGTGKVL 81 (715)
T ss_pred eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEE---EEeecccCCCceeEE
Confidence 45799999999863211 23799999999875 356899999999875
No 114
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=95.85 E-value=0.011 Score=53.30 Aligned_cols=31 Identities=35% Similarity=0.786 Sum_probs=17.8
Q ss_pred cccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (416)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (416)
.+|+.|+|+|.+... ..+|+.|+|+|++...
T Consensus 100 ~~C~~C~G~G~~i~~--~~~C~~C~G~G~v~~~ 130 (186)
T TIGR02642 100 CKCPRCRGTGLIQRR--QRECDTCAGTGRFRPT 130 (186)
T ss_pred CcCCCCCCeeEEecC--CCCCCCCCCccEEeee
Confidence 355666666655221 1467777777776543
No 115
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.23 E-value=0.021 Score=58.74 Aligned_cols=47 Identities=19% Similarity=0.399 Sum_probs=36.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-------hHHHHHHHHHHHHHHh
Q 014884 89 GVPENASQDEIKKAFHMLAKQYHPDANKNNP-------SAKRKFQEIRDAYETL 135 (416)
Q Consensus 89 gv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~~L 135 (416)
++..-.+.++|||+||+..+..||||.+..+ .|++.|..+++||+.-
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 3444568999999999999999999987652 2667777777777654
No 116
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=93.66 E-value=0.18 Score=42.59 Aligned_cols=60 Identities=23% Similarity=0.276 Sum_probs=41.3
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhh
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRA 142 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~ 142 (416)
+.-..-..||+|++..+.++|.+.|.+|-...+|++.++- =.=.+|..|.+.|....+..
T Consensus 55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSf----YLQSKV~rAKErl~~El~~~ 114 (127)
T PF03656_consen 55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSF----YLQSKVFRAKERLEQELKEE 114 (127)
T ss_dssp --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-H----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 4445778999999999999999999999999999988641 11136888999988665443
No 117
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=93.01 E-value=0.044 Score=52.50 Aligned_cols=57 Identities=33% Similarity=0.726 Sum_probs=41.4
Q ss_pred eeecCCCCCCCCC--CCCcccccCCCcceeEEEeC--CCcccCCCCCCceEEeeeeeeEeeCCcEEe
Q 014884 229 FVPCDSCHGRGFP--ADAKTKICSTCRGIGRVTIP--PFTSTCSTCKGLGRIIKDHCMTCKGSGVVD 291 (416)
Q Consensus 229 ~~~C~~C~G~G~~--~~~~~~~C~~C~G~G~~~~~--~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~ 291 (416)
...|+.|+|.|.. ...++..|+.|-| +..+ .....|..|+|+|+ ..|.+|+|.|...
T Consensus 198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G---~~~~k~gt~~~C~~C~G~G~---~~C~tC~grG~k~ 258 (406)
T KOG2813|consen 198 AMVCHGCSGSGSNSYGIGTPMHCMSCTG---VPPPKIGTHDLCYMCHGRGI---KECHTCKGRGKKP 258 (406)
T ss_pred ceeccCcCCCCccccccCcceecccccC---CCCCCCCccchhhhccCCCc---ccCCcccCCCCcc
Confidence 5689999999863 2345778999988 1111 12468999999996 4799999988654
No 118
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=89.99 E-value=0.58 Score=45.41 Aligned_cols=78 Identities=21% Similarity=0.382 Sum_probs=50.5
Q ss_pred eeeeeeeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEE
Q 014884 223 HVSFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVK 297 (416)
Q Consensus 223 ~~~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~ 297 (416)
.........|..|.|.|.... -...+|..|+|.|.+. ...|..|.|.|.+...+=.....+..+....+|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~----~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~ 250 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL----RDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLR 250 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeecccccccceec----cchHHHhhcchhhhhheeEEeecCcccccccEEE
Confidence 445567789999999993221 1123799999999984 3449999999976544444444444444444555
Q ss_pred EEecccc
Q 014884 298 VTIPAGV 304 (416)
Q Consensus 298 V~Ip~G~ 304 (416)
+..+...
T Consensus 251 ~~~~~~~ 257 (288)
T KOG0715|consen 251 FAGHGND 257 (288)
T ss_pred EecCCcc
Confidence 5555443
No 119
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=86.58 E-value=0.58 Score=44.35 Aligned_cols=22 Identities=45% Similarity=1.017 Sum_probs=10.3
Q ss_pred ecCCCCCCCCCCCCcccccCCCcceeEE
Q 014884 231 PCDSCHGRGFPADAKTKICSTCRGIGRV 258 (416)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 258 (416)
.|..|.|.++ ..|..|+|+-++
T Consensus 231 ~C~~CGg~rF------lpC~~C~GS~kv 252 (281)
T KOG2824|consen 231 VCESCGGARF------LPCSNCHGSCKV 252 (281)
T ss_pred cCCCcCCcce------EecCCCCCceee
Confidence 4555554443 245555554444
No 120
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=82.69 E-value=3.4 Score=37.67 Aligned_cols=38 Identities=32% Similarity=0.472 Sum_probs=30.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhh
Q 014884 91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (416)
Q Consensus 91 ~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~ 136 (416)
+++||.+||++|+.++..+|- +| ++.-.+|-.||+.+.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHH
Confidence 478999999999999999983 23 345567999999654
No 121
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=81.28 E-value=3.7 Score=33.94 Aligned_cols=46 Identities=17% Similarity=0.351 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChh----HHHHHHHHHHHHHHhhh
Q 014884 92 ENASQDEIKKAFHMLAKQYHPDANKNNPS----AKRKFQEIRDAYETLRD 137 (416)
Q Consensus 92 ~~a~~~eik~ayr~la~~~HPD~~~~~~~----a~~~f~~i~~Ay~~L~d 137 (416)
+..+..+++.|.|.+-++.|||.....|+ .++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 34567889999999999999999877765 34456666666665553
No 122
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=79.98 E-value=1.4 Score=38.37 Aligned_cols=23 Identities=39% Similarity=0.892 Sum_probs=13.5
Q ss_pred eecCCCCCCCCCCCCcccccCCCcceeEE
Q 014884 230 VPCDSCHGRGFPADAKTKICSTCRGIGRV 258 (416)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 258 (416)
..|..|.|.++ ..|..|+|+=++
T Consensus 100 ~~C~~Cgg~rf------v~C~~C~Gs~k~ 122 (147)
T cd03031 100 GVCEGCGGARF------VPCSECNGSCKV 122 (147)
T ss_pred CCCCCCCCcCe------EECCCCCCcceE
Confidence 34666666654 356666666554
No 123
>PF13446 RPT: A repeated domain in UCH-protein
Probab=76.53 E-value=4.4 Score=29.44 Aligned_cols=45 Identities=27% Similarity=0.568 Sum_probs=32.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhh
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d 137 (416)
.+.|+.||++++.+.+.|-.+|+..... +| .....+.+|..++.+
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~~--------~P---~~~~~~r~AL~~Ia~ 49 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVND--------DP---SQKDTLREALRVIAE 49 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHHc--------Ch---HhHHHHHHHHHHHHH
Confidence 4569999999999999999999988761 22 233445566666654
No 124
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=75.83 E-value=2.8 Score=41.53 Aligned_cols=54 Identities=30% Similarity=0.442 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC----ChhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 94 ASQDEIKKAFHMLAKQYHPDANKN----NPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 94 a~~~eik~ayr~la~~~HPD~~~~----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
++..+|..+|+..++..||++... ....++.|+.|.+||++|.+..+|...|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 567889999999999999998741 123567799999999999986665555554
No 125
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=72.89 E-value=2.2 Score=48.55 Aligned_cols=62 Identities=18% Similarity=0.314 Sum_probs=37.7
Q ss_pred CcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceE---EeeeeeeEeeCCcEEe
Q 014884 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR---IIKDHCMTCKGSGVVD 291 (416)
Q Consensus 219 G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~---~~~~~C~~C~g~G~~~ 291 (416)
+...++.+. ...|+.|...... ..|+.|+..-.. ...|+.|+..=. .....|+.|..+-.-.
T Consensus 658 ~G~ieVEV~-~rkCPkCG~~t~~-----~fCP~CGs~te~-----vy~CPsCGaev~~des~a~~CP~CGtplv~~ 722 (1337)
T PRK14714 658 GGVIEVEVG-RRRCPSCGTETYE-----NRCPDCGTHTEP-----VYVCPDCGAEVPPDESGRVECPRCDVELTPY 722 (1337)
T ss_pred CCeEEEEEE-EEECCCCCCcccc-----ccCcccCCcCCC-----ceeCccCCCccCCCccccccCCCCCCccccc
Confidence 333334443 5789999876432 389999876421 237999987411 0133799998764433
No 126
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=66.47 E-value=5 Score=45.28 Aligned_cols=32 Identities=28% Similarity=0.566 Sum_probs=20.2
Q ss_pred ccccCCCcceeEEEeC-----CCcccCCCCCCceEEe
Q 014884 246 TKICSTCRGIGRVTIP-----PFTSTCSTCKGLGRII 277 (416)
Q Consensus 246 ~~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~ 277 (416)
.-.|+.|.|.|.+... ....+|+.|+|+....
T Consensus 736 ~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~ 772 (924)
T TIGR00630 736 GGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNR 772 (924)
T ss_pred CCCCCCCccceEEEEEccCCCCcccCCCCcCCceeCh
Confidence 3468888888876532 2355777777776543
No 127
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=64.12 E-value=11 Score=33.23 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=11.4
Q ss_pred EEEEEecccccCCCEEEEcC
Q 014884 295 EVKVTIPAGVDSGDTIRVPE 314 (416)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~~~g 314 (416)
.+.++||||...|..-.+.|
T Consensus 81 El~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 81 ELDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred eeeEEecCCCCCcEEEehHH
Confidence 55566666665555555543
No 128
>PRK04023 DNA polymerase II large subunit; Validated
Probab=62.23 E-value=4 Score=45.49 Aligned_cols=64 Identities=23% Similarity=0.365 Sum_probs=40.1
Q ss_pred eeeeccc-CcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCc
Q 014884 212 SFAEAAK-GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSG 288 (416)
Q Consensus 212 sl~e~~~-G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G 288 (416)
++.+|+. +....+.+ ....|+.|.-.+ ....|+.|+..-. ....|+.|+-... ...|+.|...-
T Consensus 609 ~i~~A~~~~g~~eVEV-g~RfCpsCG~~t-----~~frCP~CG~~Te-----~i~fCP~CG~~~~--~y~CPKCG~El 673 (1121)
T PRK04023 609 DINKAAKYKGTIEVEI-GRRKCPSCGKET-----FYRRCPFCGTHTE-----PVYRCPRCGIEVE--EDECEKCGREP 673 (1121)
T ss_pred cHHHHHhcCCceeecc-cCccCCCCCCcC-----CcccCCCCCCCCC-----cceeCccccCcCC--CCcCCCCCCCC
Confidence 3556665 44444444 345799998764 3468999987621 2347899854432 35699998763
No 129
>PF03833 PolC_DP2: DNA polymerase II large subunit DP2; InterPro: IPR016033 DP2 is the large subunit of a two-subunit novel archaebacterial replicative DNA polymerase first characterised for Pyrococcus furiosus. The structure of DP2 appears to be organised as a ~950 residue component separated from a ~300 residue component by a ~150 residue intein. The other subunit, DP1, has sequence similarity to the eukaryotic DNA polymerase delta small subunit. This entry represents the N-terminal ~950 residue component of DP2.; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 3O59_X.
Probab=62.17 E-value=2.5 Score=46.14 Aligned_cols=49 Identities=20% Similarity=0.491 Sum_probs=0.0
Q ss_pred eeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcE
Q 014884 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGV 289 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~ 289 (416)
...|+.|.-... ...|+.|+..-.. ...|+.|+-. .....|++|.....
T Consensus 655 ~r~Cp~Cg~~t~-----~~~Cp~CG~~T~~-----~~~Cp~C~~~--~~~~~C~~C~~~~~ 703 (900)
T PF03833_consen 655 RRRCPKCGKETF-----YNRCPECGSHTEP-----VYVCPDCGIE--VEEDECPKCGRETT 703 (900)
T ss_dssp -------------------------------------------------------------
T ss_pred cccCcccCCcch-----hhcCcccCCcccc-----ceeccccccc--cCccccccccccCc
Confidence 467999976543 4589999765432 3468888753 33568999987643
No 130
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=60.48 E-value=8 Score=36.85 Aligned_cols=38 Identities=29% Similarity=0.855 Sum_probs=32.4
Q ss_pred cccCCCcceeEEEeCCCcccCCCCCCceEEee--------eeeeEeeCCcEEe
Q 014884 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHCMTCKGSGVVD 291 (416)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~--------~~C~~C~g~G~~~ 291 (416)
..|..|+|.+.+ +|..|+|.-++.. .+|..|+-.|.+.
T Consensus 230 ~~C~~CGg~rFl-------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvr 275 (281)
T KOG2824|consen 230 GVCESCGGARFL-------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLVR 275 (281)
T ss_pred CcCCCcCCcceE-------ecCCCCCceeeeeeccCCCcEEECcccCCCCcee
Confidence 479999999987 7999999998876 6899999888764
No 131
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=60.02 E-value=5.8 Score=43.38 Aligned_cols=50 Identities=18% Similarity=0.406 Sum_probs=36.4
Q ss_pred eeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC
Q 014884 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (416)
...|..|.- ...|+.|...=......-.-.|..|+-. ..+...|+.|.+.
T Consensus 435 ~l~C~~Cg~--------v~~Cp~Cd~~lt~H~~~~~L~CH~Cg~~-~~~p~~Cp~Cgs~ 484 (730)
T COG1198 435 LLLCRDCGY--------IAECPNCDSPLTLHKATGQLRCHYCGYQ-EPIPQSCPECGSE 484 (730)
T ss_pred eeecccCCC--------cccCCCCCcceEEecCCCeeEeCCCCCC-CCCCCCCCCCCCC
Confidence 578999974 3689999876554443446689999877 4456789999876
No 132
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=59.12 E-value=8.8 Score=33.33 Aligned_cols=37 Identities=32% Similarity=0.836 Sum_probs=28.2
Q ss_pred cccCCCcceeEEEeCCCcccCCCCCCceEEee---------eeeeEeeCCcEE
Q 014884 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK---------DHCMTCKGSGVV 290 (416)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~---------~~C~~C~g~G~~ 290 (416)
..|..|.|.+.+ +|..|+|+-++.. .+|+.|+-.|.+
T Consensus 100 ~~C~~Cgg~rfv-------~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~ 145 (147)
T cd03031 100 GVCEGCGGARFV-------PCSECNGSCKVFAENATAAGGFLRCPECNENGLV 145 (147)
T ss_pred CCCCCCCCcCeE-------ECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence 468999998887 7999999877642 378888776654
No 133
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=56.30 E-value=8.8 Score=43.43 Aligned_cols=30 Identities=30% Similarity=0.646 Sum_probs=16.9
Q ss_pred cccCCCcceeEEEeC-----CCcccCCCCCCceEE
Q 014884 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRI 276 (416)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~ 276 (416)
-.|+.|.|.|.+... ....+|+.|+|+...
T Consensus 739 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~ 773 (943)
T PRK00349 739 GRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYN 773 (943)
T ss_pred CCCCcccccceEEEEeccCCCccccCccccCcccc
Confidence 347777777765432 124466666666544
No 134
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=55.45 E-value=20 Score=32.56 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=11.8
Q ss_pred EEEEEeccc-ccCCCEEEEcC
Q 014884 295 EVKVTIPAG-VDSGDTIRVPE 314 (416)
Q Consensus 295 ~l~V~Ip~G-~~~G~~i~~~g 314 (416)
.|.++|||| +..|..-.+.|
T Consensus 80 El~lei~pg~~~~G~iTTVEG 100 (192)
T TIGR00310 80 ELGLDIEPGPTSGGFITNLEG 100 (192)
T ss_pred ceEEEECCCccCCceEEeeHh
Confidence 456666666 46666555543
No 135
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=55.40 E-value=6.5 Score=19.76 Aligned_cols=13 Identities=46% Similarity=0.991 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHhh
Q 014884 124 KFQEIRDAYETLR 136 (416)
Q Consensus 124 ~f~~i~~Ay~~L~ 136 (416)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5778889998874
No 136
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=54.26 E-value=80 Score=24.07 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=35.9
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHH----HHHHHHHHhhh
Q 014884 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQ----EIRDAYETLRD 137 (416)
Q Consensus 83 ~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~----~i~~Ay~~L~d 137 (416)
|--.+.++.|-|+.+||+.|-.+.++|..=-..++ ....+.|. +|..|-.-|.|
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps-~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPS-AANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 44456789999999999999999999876444432 22344454 45555555544
No 137
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=53.64 E-value=5.2 Score=45.10 Aligned_cols=29 Identities=31% Similarity=0.621 Sum_probs=24.5
Q ss_pred ccCCCCCCceEEe---------eeeeeEeeCCcEEece
Q 014884 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (416)
Q Consensus 265 ~~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~ 293 (416)
-.|+.|.|.|.+. ...|+.|+|..+..+.
T Consensus 737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~ 774 (924)
T TIGR00630 737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRET 774 (924)
T ss_pred CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHH
Confidence 3599999999986 4799999999887664
No 138
>PRK14873 primosome assembly protein PriA; Provisional
Probab=53.30 E-value=9.2 Score=41.61 Aligned_cols=49 Identities=20% Similarity=0.449 Sum_probs=34.7
Q ss_pred eeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC
Q 014884 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (416)
...|..|.- ...|+.|.+.=......-.-.|..|+-.- ....|+.|.+.
T Consensus 383 ~l~C~~Cg~--------~~~C~~C~~~L~~h~~~~~l~Ch~CG~~~--~p~~Cp~Cgs~ 431 (665)
T PRK14873 383 SLACARCRT--------PARCRHCTGPLGLPSAGGTPRCRWCGRAA--PDWRCPRCGSD 431 (665)
T ss_pred eeEhhhCcC--------eeECCCCCCceeEecCCCeeECCCCcCCC--cCccCCCCcCC
Confidence 467888874 46899998765554333345799998753 46799999875
No 139
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=49.45 E-value=10 Score=45.70 Aligned_cols=29 Identities=34% Similarity=0.659 Sum_probs=17.5
Q ss_pred ccCCCcceeEEEeC-----CCcccCCCCCCceEE
Q 014884 248 ICSTCRGIGRVTIP-----PFTSTCSTCKGLGRI 276 (416)
Q Consensus 248 ~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~ 276 (416)
.|+.|.|.|.+.+. .+..+|+.|+|+...
T Consensus 1609 rC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~ 1642 (1809)
T PRK00635 1609 QCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQ 1642 (1809)
T ss_pred CCCCCccCceEEEecccCCCcccCCCCCCCcCCC
Confidence 47777777765432 235567777776554
No 140
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=48.88 E-value=10 Score=31.15 Aligned_cols=26 Identities=19% Similarity=0.585 Sum_probs=16.2
Q ss_pred eeeecCCCCCCCCCCCCcccccCCCc
Q 014884 228 AFVPCDSCHGRGFPADAKTKICSTCR 253 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~ 253 (416)
.+++|+.|.-.-+--+..+.+||.|+
T Consensus 8 tKR~Cp~CG~kFYDLnk~PivCP~CG 33 (108)
T PF09538_consen 8 TKRTCPSCGAKFYDLNKDPIVCPKCG 33 (108)
T ss_pred CcccCCCCcchhccCCCCCccCCCCC
Confidence 44667777766665555566666663
No 141
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=47.53 E-value=64 Score=24.40 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=26.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDA 114 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~ 114 (416)
+|--+++++++-|+..||+.|-++..+|+.=-.
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT 35 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGTT 35 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCC
Confidence 355678899999999999999998888874333
No 142
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=47.08 E-value=29 Score=29.38 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=16.6
Q ss_pred eEEEEEEecccccCCCEEEEcCc
Q 014884 293 VKEVKVTIPAGVDSGDTIRVPEA 315 (416)
Q Consensus 293 ~~~l~V~Ip~G~~~G~~i~~~g~ 315 (416)
...+++.-+.+++.||.+.+.-.
T Consensus 41 ~~~~~~~~~~~~~~GD~V~v~i~ 63 (135)
T PF04246_consen 41 PITFRAPNPIGAKVGDRVEVEIP 63 (135)
T ss_pred cEEEEecCCCCCCCCCEEEEEec
Confidence 35677777788888888877543
No 143
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=45.70 E-value=47 Score=30.38 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=16.6
Q ss_pred EEEEEecccccCCCEEEE-cCccCCCCCCCCCccEE
Q 014884 295 EVKVTIPAGVDSGDTIRV-PEAGNAGGRGRQHGNLF 329 (416)
Q Consensus 295 ~l~V~Ip~G~~~G~~i~~-~g~G~~~~~g~~~GDl~ 329 (416)
.++|+|..-...|+-+.- .|.--. .++..|||.+
T Consensus 150 ~~~v~Ie~l~~~G~GVak~~g~~vf-V~galpGE~V 184 (201)
T PRK12336 150 TYEVEITGTGRKGDGVAKKGKYTIF-VPGAKKGEVV 184 (201)
T ss_pred EEEEEEEEccCCCceEEEECCEEEE-eCCCCCCCEE
Confidence 456666665566665532 221111 2355677764
No 144
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=43.76 E-value=15 Score=38.53 Aligned_cols=50 Identities=20% Similarity=0.313 Sum_probs=30.3
Q ss_pred eeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC
Q 014884 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (416)
...|..|.-. ..|+.|.+.=......-.-.|..|+-.- .+...|+.|.+.
T Consensus 213 ~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~-~~~~~Cp~C~s~ 262 (505)
T TIGR00595 213 NLLCRSCGYI--------LCCPNCDVSLTYHKKEGKLRCHYCGYQE-PIPKTCPQCGSE 262 (505)
T ss_pred eeEhhhCcCc--------cCCCCCCCceEEecCCCeEEcCCCcCcC-CCCCCCCCCCCC
Confidence 4578888753 5788887654443333344677776432 234578888664
No 145
>PF14353 CpXC: CpXC protein
Probab=43.35 E-value=20 Score=30.02 Aligned_cols=13 Identities=31% Similarity=0.611 Sum_probs=9.5
Q ss_pred cccCCCCCCceEE
Q 014884 264 TSTCSTCKGLGRI 276 (416)
Q Consensus 264 ~~~C~~C~G~G~~ 276 (416)
..+|+.|+....+
T Consensus 38 ~~~CP~Cg~~~~~ 50 (128)
T PF14353_consen 38 SFTCPSCGHKFRL 50 (128)
T ss_pred EEECCCCCCceec
Confidence 5678888877653
No 146
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=43.06 E-value=12 Score=35.01 Aligned_cols=10 Identities=0% Similarity=0.019 Sum_probs=6.7
Q ss_pred CcEEEEEEEE
Q 014884 404 GDQYVRFRVN 413 (416)
Q Consensus 404 Gdl~v~~~v~ 413 (416)
.+|+|++.+.
T Consensus 202 H~i~l~~Q~T 211 (238)
T PF07092_consen 202 HNIVLHMQGT 211 (238)
T ss_pred EEEEEEEEEE
Confidence 6777777543
No 147
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=40.97 E-value=18 Score=41.11 Aligned_cols=31 Identities=35% Similarity=0.619 Sum_probs=24.8
Q ss_pred cCCCCCCceEEe---------eeeeeEeeCCcEEeceEEE
Q 014884 266 TCSTCKGLGRII---------KDHCMTCKGSGVVDGVKEV 296 (416)
Q Consensus 266 ~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~~~l 296 (416)
.|+.|.|.|.+. ...|+.|+|..+..+...+
T Consensus 740 ~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v 779 (943)
T PRK00349 740 RCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEV 779 (943)
T ss_pred CCCcccccceEEEEeccCCCccccCccccCccccccceEE
Confidence 599999999985 2699999999887664333
No 148
>PRK05580 primosome assembly protein PriA; Validated
Probab=40.69 E-value=15 Score=40.10 Aligned_cols=50 Identities=20% Similarity=0.416 Sum_probs=28.9
Q ss_pred eeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC
Q 014884 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (416)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (416)
...|..|.-. ..|+.|.+.=......-.-.|..|+-+- .+...|+.|.+.
T Consensus 381 ~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~-~~~~~Cp~Cg~~ 430 (679)
T PRK05580 381 FLLCRDCGWV--------AECPHCDASLTLHRFQRRLRCHHCGYQE-PIPKACPECGST 430 (679)
T ss_pred ceEhhhCcCc--------cCCCCCCCceeEECCCCeEECCCCcCCC-CCCCCCCCCcCC
Confidence 4678888643 5788887743332222234577776442 234567777664
No 149
>PRK14051 negative regulator GrlR; Provisional
Probab=40.24 E-value=96 Score=25.26 Aligned_cols=70 Identities=9% Similarity=0.016 Sum_probs=40.3
Q ss_pred ccEEEEEEEEeCCCcCCCCCceEEEEecC--HHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcCCCcCC
Q 014884 326 GNLFIKLKVADDPIFSRDGADVYVDSNIS--FTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK 396 (416)
Q Consensus 326 GDl~v~i~v~~h~~f~r~G~DL~~~~~I~--l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G~p~ 396 (416)
-|+++.+.-..|..-..-+.+-.+.+.|| +.+.-.|+++.=..-+.. ++.|..-.+-=..+.|++-|||.
T Consensus 48 ~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Ne-kl~vdv~akFI~~LvI~~~~~~~ 119 (123)
T PRK14051 48 EDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNE-KLFVDVYAKFIEPLVIKNTGMPQ 119 (123)
T ss_pred ceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCc-EEEEEEeeeeeeeeEEccCCCcc
Confidence 46677766666666655565666677777 444444444433333332 33343333334568899999995
No 150
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=38.77 E-value=43 Score=29.59 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=10.8
Q ss_pred EEEEEecccc-cCCCEEEEcC
Q 014884 295 EVKVTIPAGV-DSGDTIRVPE 314 (416)
Q Consensus 295 ~l~V~Ip~G~-~~G~~i~~~g 314 (416)
.|.++||||. ..|..-.+.|
T Consensus 78 El~lei~pg~~~~G~iTTVEG 98 (163)
T TIGR00340 78 ELGIKIEPGPASQGYISNIEG 98 (163)
T ss_pred ceeEEecCCCcCCceEEehHh
Confidence 4566666665 4554444533
No 151
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300. Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=38.45 E-value=19 Score=30.29 Aligned_cols=27 Identities=4% Similarity=0.089 Sum_probs=17.6
Q ss_pred eeeecCCCCCCCCCCCCcccccCCCcc
Q 014884 228 AFVPCDSCHGRGFPADAKTKICSTCRG 254 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G 254 (416)
.+++|+.|.-.-+--+..+.+||.|+-
T Consensus 8 tKr~Cp~cg~kFYDLnk~p~vcP~cg~ 34 (129)
T TIGR02300 8 TKRICPNTGSKFYDLNRRPAVSPYTGE 34 (129)
T ss_pred ccccCCCcCccccccCCCCccCCCcCC
Confidence 456788777666655556667777744
No 152
>PF08792 A2L_zn_ribbon: A2L zinc ribbon domain; InterPro: IPR014900 This zinc ribbon protein is found associated with some viral A2L transcription factors [].
Probab=38.34 E-value=20 Score=22.67 Aligned_cols=11 Identities=55% Similarity=1.017 Sum_probs=4.8
Q ss_pred ccCCCcceeEE
Q 014884 248 ICSTCRGIGRV 258 (416)
Q Consensus 248 ~C~~C~G~G~~ 258 (416)
.|+.|++.|.+
T Consensus 5 ~C~~C~~~~i~ 15 (33)
T PF08792_consen 5 KCSKCGGNGIV 15 (33)
T ss_pred EcCCCCCCeEE
Confidence 34444444433
No 153
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=37.35 E-value=20 Score=39.60 Aligned_cols=28 Identities=29% Similarity=0.612 Sum_probs=14.7
Q ss_pred ccCCCCCCceEEee---------eeeeEeeCCcEEec
Q 014884 265 STCSTCKGLGRIIK---------DHCMTCKGSGVVDG 292 (416)
Q Consensus 265 ~~C~~C~G~G~~~~---------~~C~~C~g~G~~~~ 292 (416)
-.|..|.|.|.+.- .+|..|+|..+..+
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~E 767 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRE 767 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcccccc
Confidence 35555555555421 45666666555443
No 154
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=36.69 E-value=35 Score=33.43 Aligned_cols=10 Identities=20% Similarity=0.338 Sum_probs=5.5
Q ss_pred eeecCCCCCC
Q 014884 229 FVPCDSCHGR 238 (416)
Q Consensus 229 ~~~C~~C~G~ 238 (416)
...|+-|.+.
T Consensus 187 ~~~CPvCGs~ 196 (309)
T PRK03564 187 RQFCPVCGSM 196 (309)
T ss_pred CCCCCCCCCc
Confidence 3456666554
No 155
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=36.53 E-value=40 Score=20.28 Aligned_cols=17 Identities=18% Similarity=0.444 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHhCC
Q 014884 96 QDEIKKAFHMLAKQYHP 112 (416)
Q Consensus 96 ~~eik~ayr~la~~~HP 112 (416)
.++.+.+.|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 37789999999999993
No 156
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=35.90 E-value=20 Score=38.91 Aligned_cols=49 Identities=18% Similarity=0.533 Sum_probs=32.7
Q ss_pred eecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCC
Q 014884 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (416)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (416)
..|+.|...- ....+-|+.|+..-. ...|+.|+-.-..-...|..|...
T Consensus 2 ~~Cp~Cg~~n---~~~akFC~~CG~~l~------~~~Cp~CG~~~~~~~~fC~~CG~~ 50 (645)
T PRK14559 2 LICPQCQFEN---PNNNRFCQKCGTSLT------HKPCPQCGTEVPVDEAHCPNCGAE 50 (645)
T ss_pred CcCCCCCCcC---CCCCccccccCCCCC------CCcCCCCCCCCCcccccccccCCc
Confidence 4799987542 234567999955431 246888877655556789999875
No 157
>PRK00564 hypA hydrogenase nickel incorporation protein; Provisional
Probab=33.51 E-value=62 Score=26.82 Aligned_cols=30 Identities=17% Similarity=0.433 Sum_probs=15.0
Q ss_pred eeeeecCCCCCCCCCCCCcccccCCCccee
Q 014884 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (416)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (416)
.....|..|.-...........||.|++..
T Consensus 69 p~~~~C~~Cg~~~~~~~~~~~~CP~Cgs~~ 98 (117)
T PRK00564 69 KVELECKDCSHVFKPNALDYGVCEKCHSKN 98 (117)
T ss_pred CCEEEhhhCCCccccCCccCCcCcCCCCCc
Confidence 455678888743322211222366665544
No 158
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=33.25 E-value=41 Score=31.92 Aligned_cols=40 Identities=25% Similarity=0.327 Sum_probs=29.2
Q ss_pred EEecCHHHHhcC-CeeEEecCCCeE-EEEeCCC-----CCCCcEEEE
Q 014884 350 DSNISFTQAILG-GKVDVPTLSGKV-QVKIPKG-----VQPGQLLVL 389 (416)
Q Consensus 350 ~~~I~l~~Al~G-~~~~i~~ldg~~-~v~ip~g-----~~~g~~~~l 389 (416)
+.+|-|+||+.| +..+|++.|+.+ .|.|.+. +.-.+.+||
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRl 65 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRL 65 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEE
Confidence 467889999999 789999999985 5666543 223445666
No 159
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=31.90 E-value=34 Score=37.81 Aligned_cols=40 Identities=25% Similarity=0.502 Sum_probs=27.6
Q ss_pred cccCCCcceeEEEeC-----CCcccCCCCCCceEEeeeeeeEeeC
Q 014884 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMTCKG 286 (416)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~~C~~C~g 286 (416)
-.|..|.|.|.+.+. ..-.+|+.|+|+-.-.+.--.+-+|
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~EtLev~ykG 775 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKG 775 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcccccceEEEEECC
Confidence 479999999987543 2357899999997765443333344
No 160
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=31.11 E-value=59 Score=26.79 Aligned_cols=37 Identities=24% Similarity=0.485 Sum_probs=16.8
Q ss_pred Ccceeeee-eeeeecCCCCCCCCCCCCcccccCCCccee
Q 014884 219 GCTKHVSF-DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (416)
Q Consensus 219 G~~~~~~~-~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (416)
|.+..+.. .....|..|........ ....||.|++..
T Consensus 59 gA~L~I~~vp~~~~C~~Cg~~~~~~~-~~~~CP~Cgs~~ 96 (113)
T PRK12380 59 GCDLHIVYKPAQAWCWDCSQVVEIHQ-HDAQCPHCHGER 96 (113)
T ss_pred CCEEEEEeeCcEEEcccCCCEEecCC-cCccCcCCCCCC
Confidence 44444332 44566777764433211 122355555443
No 161
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=30.23 E-value=56 Score=27.28 Aligned_cols=41 Identities=34% Similarity=0.575 Sum_probs=27.8
Q ss_pred EEeCCCCCCCcEEEEcCCCcCCCC-----CCCCCCcEEEEEEEEcC
Q 014884 375 VKIPKGVQPGQLLVLRGKGLAKNG-----LFLDHGDQYVRFRVNFP 415 (416)
Q Consensus 375 v~ip~g~~~g~~~~l~g~G~p~~~-----~~~~~Gdl~v~~~v~~P 415 (416)
..||.++.+|+.+.|.|.=.+..+ -....+|+.++|++.|+
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~ 48 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFN 48 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCC
Confidence 467888999999999765433221 11123689999998876
No 162
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=30.04 E-value=26 Score=32.88 Aligned_cols=10 Identities=60% Similarity=1.468 Sum_probs=4.4
Q ss_pred ccCCCcceeE
Q 014884 248 ICSTCRGIGR 257 (416)
Q Consensus 248 ~C~~C~G~G~ 257 (416)
+||.|.|.|+
T Consensus 40 tCPTCqGtGr 49 (238)
T PF07092_consen 40 TCPTCQGTGR 49 (238)
T ss_pred cCCCCcCCcc
Confidence 4444444444
No 163
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=29.82 E-value=32 Score=28.44 Aligned_cols=20 Identities=25% Similarity=0.690 Sum_probs=15.0
Q ss_pred CCCCCCceEEeeeeeeEeeC
Q 014884 267 CSTCKGLGRIIKDHCMTCKG 286 (416)
Q Consensus 267 C~~C~G~G~~~~~~C~~C~g 286 (416)
|+.|++.=.+.+-.|..|..
T Consensus 1 CPvCg~~l~vt~l~C~~C~t 20 (113)
T PF09862_consen 1 CPVCGGELVVTRLKCPSCGT 20 (113)
T ss_pred CCCCCCceEEEEEEcCCCCC
Confidence 67777777777778888875
No 164
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.10 E-value=67 Score=26.92 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=38.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhh
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~ 140 (416)
..--+||+|+...+.+||.+.|..|-....+.+.++=- .=.+|-.|-|-|-...+
T Consensus 59 qEa~qILnV~~~ln~eei~k~yehLFevNdkskGGSFY----LQSKVfRAkErld~El~ 113 (132)
T KOG3442|consen 59 QEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGSFY----LQSKVFRAKERLDEELK 113 (132)
T ss_pred HHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCccee----ehHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999887777665311 11234455555544443
No 165
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=28.99 E-value=61 Score=28.09 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=14.0
Q ss_pred ccccCCCcceeEEEeCCCcccCCCCCCceEE
Q 014884 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (416)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (416)
...|..|+-.=....+..-.+|+.|++..+.
T Consensus 112 ~l~C~~Cg~~~~~~~~~~l~~Cp~C~~~~F~ 142 (146)
T PF07295_consen 112 TLVCENCGHEVELTHPERLPPCPKCGHTEFT 142 (146)
T ss_pred eEecccCCCEEEecCCCcCCCCCCCCCCeee
Confidence 3455555433333222223456666665443
No 166
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=27.24 E-value=64 Score=26.64 Aligned_cols=11 Identities=18% Similarity=0.613 Sum_probs=6.7
Q ss_pred eeeeecCCCCC
Q 014884 227 DAFVPCDSCHG 237 (416)
Q Consensus 227 ~~~~~C~~C~G 237 (416)
.....|..|.-
T Consensus 68 p~~~~C~~Cg~ 78 (115)
T TIGR00100 68 PVECECEDCSE 78 (115)
T ss_pred CcEEEcccCCC
Confidence 34566777763
No 167
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=26.58 E-value=44 Score=20.65 Aligned_cols=23 Identities=17% Similarity=0.614 Sum_probs=7.8
Q ss_pred cCCCcceeEEEeCCCcccCCCCC
Q 014884 249 CSTCRGIGRVTIPPFTSTCSTCK 271 (416)
Q Consensus 249 C~~C~G~G~~~~~~~~~~C~~C~ 271 (416)
|+.|++.=......+...|+.|+
T Consensus 6 C~~CG~~t~~~~~g~~r~C~~Cg 28 (32)
T PF09297_consen 6 CGRCGAPTKPAPGGWARRCPSCG 28 (32)
T ss_dssp -TTT--BEEE-SSSS-EEESSSS
T ss_pred cCcCCccccCCCCcCEeECCCCc
Confidence 55554443332223344555553
No 168
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=25.87 E-value=1.7e+02 Score=25.89 Aligned_cols=65 Identities=25% Similarity=0.274 Sum_probs=53.7
Q ss_pred ceEEEEecCHHHHhcCCeeEEecCCCeE-EEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884 346 DVYVDSNISFTQAILGGKVDVPTLSGKV-QVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN 413 (416)
Q Consensus 346 DL~~~~~I~l~~Al~G~~~~i~~ldg~~-~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~ 413 (416)
++...+.++..+++.+....+....... .+.++.+...+..+++++.+.... ...|+.+.++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 215 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSK 215 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeecc
Confidence 7888899999999999988888877663 368999999999999999998765 2358888887765
No 169
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=25.43 E-value=20 Score=43.37 Aligned_cols=28 Identities=39% Similarity=0.688 Sum_probs=23.3
Q ss_pred cCCCCCCceEEe---------eeeeeEeeCCcEEece
Q 014884 266 TCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (416)
Q Consensus 266 ~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~ 293 (416)
.|+.|.|.|.+. ...|..|+|..+..+.
T Consensus 1609 rC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~ 1645 (1809)
T PRK00635 1609 QCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLA 1645 (1809)
T ss_pred CCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHH
Confidence 599999999974 3689999999876654
No 170
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=25.38 E-value=73 Score=26.26 Aligned_cols=19 Identities=32% Similarity=0.768 Sum_probs=9.6
Q ss_pred Ccceeeee-eeeeecCCCCC
Q 014884 219 GCTKHVSF-DAFVPCDSCHG 237 (416)
Q Consensus 219 G~~~~~~~-~~~~~C~~C~G 237 (416)
|++..+.. .....|..|.-
T Consensus 59 gA~L~i~~~p~~~~C~~Cg~ 78 (114)
T PRK03681 59 GCKLHLEEQEAECWCETCQQ 78 (114)
T ss_pred CCEEEEEeeCcEEEcccCCC
Confidence 34433332 34556777763
No 171
>PF03589 Antiterm: Antitermination protein; InterPro: IPR003222 This entry consists of antitermination proteins found in bacteriophages, such as protein Q from phage lambda, and some bacterial homologues. Protein Q positively regulates expression of the phage late gene operon by binding to the bacterial host RNA polymerase (RNAP) and modifying it. The modified RNAP transcribes through termination sites that otherwise prevent expression of the regulated genes [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=24.83 E-value=29 Score=27.75 Aligned_cols=12 Identities=33% Similarity=0.816 Sum_probs=6.7
Q ss_pred ccCCCCCCceEE
Q 014884 265 STCSTCKGLGRI 276 (416)
Q Consensus 265 ~~C~~C~G~G~~ 276 (416)
..|..|.|.|..
T Consensus 33 k~c~rcgg~G~s 44 (95)
T PF03589_consen 33 KDCERCGGRGYS 44 (95)
T ss_pred hhhhhhcCCCCC
Confidence 456666665543
No 172
>COG5216 Uncharacterized conserved protein [Function unknown]
Probab=24.15 E-value=53 Score=23.67 Aligned_cols=13 Identities=15% Similarity=0.330 Sum_probs=9.9
Q ss_pred EEEeeeeecccCc
Q 014884 208 ELVLSFAEAAKGC 220 (416)
Q Consensus 208 ~l~isl~e~~~G~ 220 (416)
.+.|+|+++..|-
T Consensus 30 RFeIsLeDl~~GE 42 (67)
T COG5216 30 RFEISLEDLRNGE 42 (67)
T ss_pred EeEEEHHHhhCCc
Confidence 3678899988873
No 173
>smart00841 Elong-fact-P_C Elongation factor P, C-terminal. These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology PUBMED:15210970.
Probab=23.24 E-value=64 Score=23.12 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=16.9
Q ss_pred eEEEEeCCCCCCCcEEEEcC
Q 014884 372 KVQVKIPKGVQPGQLLVLRG 391 (416)
Q Consensus 372 ~~~v~ip~g~~~g~~~~l~g 391 (416)
-+.|.+|..++.|++|+|.-
T Consensus 29 G~~i~VP~FI~~Gd~I~V~T 48 (56)
T smart00841 29 GAVVQVPLFINEGDKIKVDT 48 (56)
T ss_pred CCEEEcCCcccCCCEEEEEC
Confidence 35899999999999998853
No 174
>PF13901 DUF4206: Domain of unknown function (DUF4206)
Probab=23.23 E-value=25 Score=32.19 Aligned_cols=47 Identities=34% Similarity=0.835 Sum_probs=27.9
Q ss_pred eecCCCCCCCCCCCCcccccCCCcceeEEEeCCCc----ccCCCCCCceEE---eeeeeeEee
Q 014884 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFT----STCSTCKGLGRI---IKDHCMTCK 285 (416)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~----~~C~~C~G~G~~---~~~~C~~C~ 285 (416)
..|+.|.+.|. .|.-|+.... +.||+ ..|..|+-.=.. .+..|+.|.
T Consensus 143 ~~C~lC~~kGf-------iCe~C~~~~~--IfPF~~~~~~~C~~C~~v~H~~C~~~~~CpkC~ 196 (202)
T PF13901_consen 143 YSCELCQQKGF-------ICEICNSDDI--IFPFQIDTTVRCPKCKSVFHKSCFRKKSCPKCA 196 (202)
T ss_pred HHhHHHHhCCC-------CCccCCCCCC--CCCCCCCCeeeCCcCccccchhhcCCCCCCCcH
Confidence 37999999886 6888877733 34553 355555432111 235677764
No 175
>COG1326 Uncharacterized archaeal Zn-finger protein [General function prediction only]
Probab=23.16 E-value=4.9e+02 Score=23.68 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=41.3
Q ss_pred EEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeC--CCc-CCCCCceEEEEecCH-HHHhcCCeeEEec
Q 014884 295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD--PIF-SRDGADVYVDSNISF-TQAILGGKVDVPT 368 (416)
Q Consensus 295 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h--~~f-~r~G~DL~~~~~I~l-~~Al~G~~~~i~~ 368 (416)
+-.|.+||| ++-||.|.+.++- +.+..+.-+ ..- +....||.+..-.|| ..+-.|.++..+.
T Consensus 64 ~~~vel~~gE~l~vGDei~vd~e~------------veITSIE~~~gkRV~~A~veeIeTVWgrsl~~p~~vgvSi~~~~ 131 (201)
T COG1326 64 TKEVELDPGETLKVGDEIEVDGEE------------VEITSIELGGGKRVKSAKVEEIETVWGRSLVIPVEVGVSIHLKG 131 (201)
T ss_pred ceeEecCCCCeEecCCEEEEcCCE------------EEEEEEeeCCCccccccccceeeeEeeecccCccEEEEEEecCC
Confidence 567888888 7888888886642 222233322 222 235667776666644 3455666666555
Q ss_pred CCCeEEEEeCC
Q 014884 369 LSGKVQVKIPK 379 (416)
Q Consensus 369 ldg~~~v~ip~ 379 (416)
..-.+.+.+|.
T Consensus 132 ~t~s~kv~Vp~ 142 (201)
T COG1326 132 KTYSIKVVVPR 142 (201)
T ss_pred ceEEEEEEcCC
Confidence 22124566664
No 176
>PF01155 HypA: Hydrogenase expression/synthesis hypA family; InterPro: IPR000688 Bacterial membrane-bound nickel-dependent hydrogenases requires a number of accessory proteins which are involved in their maturation. The exact role of these proteins is not yet clear, but some seem to be required for the incorporation of the nickel ions []. One of these proteins is generally known as hypA. It is a protein of about 12 to 14 kDa that contains, in its C-terminal region, four conserved cysteines that form a zinc-finger like motif. Escherichia coli has two proteins that belong to this family, hypA and hybF. A homologue, MJ0214, has also been found in a number of archaeal species, including the genome of Methanocaldococcus jannaschii (Methanococcus jannaschii).; GO: 0016151 nickel ion binding, 0006464 protein modification process; PDB: 2KDX_A 3A44_D 3A43_B.
Probab=23.12 E-value=63 Score=26.55 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=12.2
Q ss_pred eeeeecCCCCCCCCCCCCcccccCCCccee
Q 014884 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (416)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (416)
.....|..|......... ...||.|++..
T Consensus 68 p~~~~C~~Cg~~~~~~~~-~~~CP~Cgs~~ 96 (113)
T PF01155_consen 68 PARARCRDCGHEFEPDEF-DFSCPRCGSPD 96 (113)
T ss_dssp --EEEETTTS-EEECHHC-CHH-SSSSSS-
T ss_pred CCcEECCCCCCEEecCCC-CCCCcCCcCCC
Confidence 345667777665432211 13455555544
No 177
>TIGR03180 UraD_2 OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model. This model is a separate (but related) clade from that represented by TIGR3164. This model places a second homolog in streptomyces species which (are not in the vicinity of other urate catabolism associated genes) below the trusted cutoff.
Probab=22.85 E-value=2.5e+02 Score=24.57 Aligned_cols=10 Identities=30% Similarity=0.341 Sum_probs=7.2
Q ss_pred HHHhCCCCCC
Q 014884 107 AKQYHPDANK 116 (416)
Q Consensus 107 a~~~HPD~~~ 116 (416)
+...|||...
T Consensus 57 ~l~~HP~lg~ 66 (158)
T TIGR03180 57 ALAGHPRIGE 66 (158)
T ss_pred HHHhCCcccC
Confidence 4667999864
No 178
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=22.40 E-value=1.5e+02 Score=21.75 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 101 KAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 101 ~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
+..|...++-||+... .+..+.|.+.|..|++..+..-+|..
T Consensus 14 ~~~r~~~~~~~p~~~~-----~eisk~l~~~Wk~ls~~eK~~y~~~a 55 (72)
T cd01388 14 KRHRRKVLQEYPLKEN-----RAISKILGDRWKALSNEEKQPYYEEA 55 (72)
T ss_pred HHHHHHHHHHCCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4445566677898642 46778899999999998877655553
No 179
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=22.03 E-value=76 Score=21.36 Aligned_cols=7 Identities=29% Similarity=0.914 Sum_probs=3.3
Q ss_pred ccCCCCC
Q 014884 265 STCSTCK 271 (416)
Q Consensus 265 ~~C~~C~ 271 (416)
..|+.|+
T Consensus 22 ~~Cp~CG 28 (46)
T PRK00398 22 VRCPYCG 28 (46)
T ss_pred eECCCCC
Confidence 3455554
No 180
>COG2879 Uncharacterized small protein [Function unknown]
Probab=21.40 E-value=1.5e+02 Score=21.76 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=16.6
Q ss_pred HHHHHHHHhCCCCCCCChhHHHHHHHHH
Q 014884 102 AFHMLAKQYHPDANKNNPSAKRKFQEIR 129 (416)
Q Consensus 102 ayr~la~~~HPD~~~~~~~a~~~f~~i~ 129 (416)
.|-.-.++.|||+.+-. -+|-|++-.
T Consensus 27 nYVehmr~~hPd~p~mT--~~EFfrec~ 52 (65)
T COG2879 27 NYVEHMRKKHPDKPPMT--YEEFFRECQ 52 (65)
T ss_pred HHHHHHHHhCcCCCccc--HHHHHHHHH
Confidence 46677889999998643 234444433
No 181
>PF13719 zinc_ribbon_5: zinc-ribbon domain
Probab=21.28 E-value=49 Score=21.34 Aligned_cols=10 Identities=30% Similarity=0.866 Sum_probs=5.0
Q ss_pred eecCCCCCCC
Q 014884 230 VPCDSCHGRG 239 (416)
Q Consensus 230 ~~C~~C~G~G 239 (416)
+.|+.|+..-
T Consensus 3 i~CP~C~~~f 12 (37)
T PF13719_consen 3 ITCPNCQTRF 12 (37)
T ss_pred EECCCCCceE
Confidence 3455555443
No 182
>PRK13798 putative OHCU decarboxylase; Provisional
Probab=21.20 E-value=2.8e+02 Score=24.52 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=17.5
Q ss_pred HHHhCCCCCCC----------------ChhHHHHHHHHHHHHH
Q 014884 107 AKQYHPDANKN----------------NPSAKRKFQEIRDAYE 133 (416)
Q Consensus 107 a~~~HPD~~~~----------------~~~a~~~f~~i~~Ay~ 133 (416)
+...|||.... +++..+.|..+|.+|+
T Consensus 67 ~l~~HP~lg~~~~~~~S~~EQ~gl~~l~~~~~~~l~~lN~~Y~ 109 (166)
T PRK13798 67 ALAGHPRIGERPASKASAREQAGVADADEAVMAALAAGNRAYE 109 (166)
T ss_pred HHHhCCcccCccccccCHHHhcccccCCHHHHHHHHHHHHHHH
Confidence 46679998642 1234556777777776
No 183
>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....
Probab=20.71 E-value=79 Score=19.85 Aligned_cols=7 Identities=29% Similarity=0.899 Sum_probs=3.2
Q ss_pred ccccCCC
Q 014884 246 TKICSTC 252 (416)
Q Consensus 246 ~~~C~~C 252 (416)
...|+.|
T Consensus 17 ~irC~~C 23 (32)
T PF03604_consen 17 PIRCPEC 23 (32)
T ss_dssp TSSBSSS
T ss_pred cEECCcC
Confidence 3344444
No 184
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=20.31 E-value=1e+02 Score=30.20 Aligned_cols=16 Identities=19% Similarity=0.079 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHhCCCC
Q 014884 99 IKKAFHMLAKQYHPDA 114 (416)
Q Consensus 99 ik~ayr~la~~~HPD~ 114 (416)
.++.+.+|..++.|..
T Consensus 100 w~~~l~~LL~~l~~~~ 115 (305)
T TIGR01562 100 WLPWLDALLAGYPAPA 115 (305)
T ss_pred HHHHHHHHHHHhcccc
Confidence 4666777777777773
No 185
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=20.12 E-value=2.1e+02 Score=27.71 Aligned_cols=58 Identities=26% Similarity=0.350 Sum_probs=35.1
Q ss_pred cccccCCCEEEEcC-ccCCCCCCCCCccEEEEEEEEeCCCcCCC---------CCceEEEEecCHHHHhcCC
Q 014884 301 PAGVDSGDTIRVPE-AGNAGGRGRQHGNLFIKLKVADDPIFSRD---------GADVYVDSNISFTQAILGG 362 (416)
Q Consensus 301 p~G~~~G~~i~~~g-~G~~~~~g~~~GDl~v~i~v~~h~~f~r~---------G~DL~~~~~I~l~~Al~G~ 362 (416)
+-|.++|+.++|.+ +|+...++.. .++++++....|+-. ..=+...+++++..|..|+
T Consensus 186 ~h~l~~gd~V~f~ev~gm~~lN~~~----~~~v~~~~~~~f~i~d~~~~~~y~~gG~~~qvK~~~~~~~~g~ 253 (286)
T cd01491 186 RHGFEDGDYVTFSEVEGMTELNGCE----PRKIKVKGPYTFSIGDTSSFSEYIRGGIVTQVKLSPMAAFFGG 253 (286)
T ss_pred ccCCcCCCEEEEeccCcchhhCCCc----cEEEEECCCCeEEECcCcCcCccccCcEEEEEecccHHHHhhh
Confidence 56899999999987 5666554433 355666644445421 1124455556666666665
Done!