Query 014884
Match_columns 416
No_of_seqs 399 out of 2891
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:32:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014884.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014884hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 9.9E-62 3.4E-66 473.6 17.8 269 79-416 25-300 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 1.8E-54 6.2E-59 407.7 18.9 215 199-416 8-235 (248)
3 3agx_A DNAJ homolog subfamily 100.0 5.3E-42 1.8E-46 307.8 18.0 163 202-416 2-165 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 7.6E-41 2.6E-45 300.2 19.0 163 201-416 2-165 (180)
5 1c3g_A Heat shock protein 40; 100.0 2.9E-39 9.8E-44 287.3 16.0 158 203-416 1-159 (170)
6 3i38_A Putative chaperone DNAJ 99.9 3.6E-23 1.2E-27 169.7 8.9 79 335-416 2-80 (109)
7 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.4E-22 4.8E-27 165.0 4.8 73 81-153 2-74 (103)
8 2dn9_A DNAJ homolog subfamily 99.9 6.6E-22 2.3E-26 153.1 8.1 73 79-151 4-76 (79)
9 1xao_A YDJ1, mitochondrial pro 99.8 3.8E-21 1.3E-25 160.8 8.8 77 339-416 1-80 (121)
10 1hdj_A Human HSP40, HDJ-1; mol 99.8 2.8E-21 9.5E-26 148.9 7.0 71 81-152 2-72 (77)
11 2ej7_A HCG3 gene; HCG3 protein 99.8 3.3E-21 1.1E-25 150.3 7.5 73 79-151 6-79 (82)
12 2ctr_A DNAJ homolog subfamily 99.8 3.9E-21 1.3E-25 151.9 7.0 72 79-151 4-75 (88)
13 2ctp_A DNAJ homolog subfamily 99.8 5.1E-21 1.7E-25 147.8 7.0 72 79-151 4-75 (78)
14 2yua_A Williams-beuren syndrom 99.8 3.5E-21 1.2E-25 155.5 6.3 72 77-148 12-83 (99)
15 2dmx_A DNAJ homolog subfamily 99.8 8.1E-21 2.8E-25 151.3 8.3 74 79-152 6-80 (92)
16 2ctq_A DNAJ homolog subfamily 99.8 6.9E-21 2.3E-25 157.3 6.7 74 79-152 17-90 (112)
17 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.2E-20 4.2E-25 149.0 7.6 71 80-151 15-85 (88)
18 2och_A Hypothetical protein DN 99.8 1.4E-20 4.9E-25 143.3 6.8 68 79-149 5-72 (73)
19 2ctw_A DNAJ homolog subfamily 99.8 1.1E-20 3.9E-25 155.1 6.2 73 79-151 14-86 (109)
20 2lgw_A DNAJ homolog subfamily 99.8 2.4E-20 8.2E-25 150.3 6.6 72 82-153 2-74 (99)
21 2o37_A Protein SIS1; HSP40, J- 99.8 1.5E-20 5.1E-25 149.7 5.2 70 79-151 5-74 (92)
22 1wjz_A 1700030A21RIK protein; 99.8 2.9E-20 1E-24 148.7 5.9 71 79-149 13-89 (94)
23 2ctt_A DNAJ homolog subfamily 99.8 2E-20 6.9E-25 152.4 -0.2 99 202-300 1-103 (104)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.8E-19 9.7E-24 146.9 5.2 70 80-149 13-86 (109)
25 3bvo_A CO-chaperone protein HS 99.7 2.3E-18 7.9E-23 156.8 7.9 100 42-147 9-115 (207)
26 3apq_A DNAJ homolog subfamily 99.7 1.3E-18 4.4E-23 159.3 6.3 72 82-153 2-73 (210)
27 2ys8_A RAB-related GTP-binding 99.7 2.3E-18 7.8E-23 136.4 6.5 62 81-143 26-87 (90)
28 2l6l_A DNAJ homolog subfamily 99.7 2.3E-18 7.7E-23 150.5 6.1 70 79-148 7-82 (155)
29 1iur_A KIAA0730 protein; DNAJ 99.7 1.7E-18 5.7E-23 136.1 4.4 68 76-143 10-78 (88)
30 1faf_A Large T antigen; J doma 99.7 1.1E-17 3.7E-22 129.1 5.7 60 82-145 11-72 (79)
31 1gh6_A Large T antigen; tumor 99.7 2.5E-18 8.6E-23 141.6 1.5 65 81-149 7-73 (114)
32 3hho_A CO-chaperone protein HS 99.7 1.4E-17 4.9E-22 147.8 6.0 68 81-148 3-77 (174)
33 2pf4_E Small T antigen; PP2A, 99.7 6.5E-18 2.2E-22 148.6 2.4 65 81-149 10-76 (174)
34 1n4c_A Auxilin; four helix bun 99.7 3.8E-17 1.3E-21 144.5 5.6 65 80-144 115-182 (182)
35 1fpo_A HSC20, chaperone protei 99.7 3.7E-17 1.3E-21 144.7 5.2 67 83-149 2-75 (171)
36 2qwo_B Putative tyrosine-prote 99.6 7.1E-17 2.4E-21 127.2 4.2 56 82-137 33-91 (92)
37 2guz_A Mitochondrial import in 99.6 1.4E-16 4.7E-21 120.3 4.9 59 79-141 11-70 (71)
38 3uo3_A J-type CO-chaperone JAC 99.6 2.7E-16 9.3E-21 140.1 3.9 67 79-148 8-81 (181)
39 3ag7_A Putative uncharacterize 99.6 3.1E-16 1.1E-20 127.4 3.1 59 80-139 39-104 (106)
40 3apo_A DNAJ homolog subfamily 99.5 4.8E-16 1.6E-20 168.8 1.0 75 79-153 18-92 (780)
41 1nlt_A Protein YDJ1, mitochond 99.3 2.3E-12 8E-17 120.7 7.9 130 207-338 31-235 (248)
42 1exk_A DNAJ protein; extended 99.3 1.3E-12 4.3E-17 100.7 2.7 74 219-292 1-78 (79)
43 2y4t_A DNAJ homolog subfamily 98.9 5.7E-10 2E-14 110.9 5.0 65 82-146 382-449 (450)
44 2guz_B Mitochondrial import in 98.9 2E-09 6.8E-14 78.9 4.6 53 82-138 4-59 (65)
45 3i38_A Putative chaperone DNAJ 98.8 4.7E-09 1.6E-13 85.5 5.7 74 200-340 9-82 (109)
46 2q2g_A HSP40 protein, heat sho 98.7 1.7E-08 5.8E-13 89.8 7.8 69 343-413 2-83 (180)
47 1xao_A YDJ1, mitochondrial pro 98.7 1.8E-08 6.3E-13 83.6 6.9 76 200-339 4-81 (121)
48 1c3g_A Heat shock protein 40; 98.7 2.3E-08 7.8E-13 88.1 7.7 68 345-413 1-77 (170)
49 3lz8_A Putative chaperone DNAJ 98.7 1.4E-08 4.6E-13 98.8 6.6 72 341-413 137-222 (329)
50 3agx_A DNAJ homolog subfamily 98.7 2.9E-08 9.9E-13 88.3 7.3 68 344-413 2-83 (181)
51 2ctt_A DNAJ homolog subfamily 97.5 6.4E-05 2.2E-09 60.3 3.3 49 228-280 44-97 (104)
52 1exk_A DNAJ protein; extended 97.4 5.9E-05 2E-09 57.3 2.4 47 228-278 27-78 (79)
53 3pmq_A Decaheme cytochrome C M 97.4 7.4E-06 2.5E-10 85.8 -3.8 70 206-275 168-257 (669)
54 3lcz_A YCZA, inhibitor of trap 97.4 3.4E-05 1.2E-09 53.8 0.5 30 263-292 8-37 (53)
55 3lcz_A YCZA, inhibitor of trap 96.7 0.00088 3E-08 46.6 2.5 26 248-277 11-36 (53)
56 2bx9_A Anti-trap, AT, tryptoph 96.6 0.00099 3.4E-08 46.3 2.5 10 231-240 11-20 (53)
57 2bx9_A Anti-trap, AT, tryptoph 96.6 0.00051 1.7E-08 47.8 0.8 27 247-277 10-36 (53)
58 2pzi_A Probable serine/threoni 88.0 0.3 1E-05 51.5 3.9 48 79-134 626-675 (681)
59 1ltl_A DNA replication initiat 37.8 58 0.002 29.9 6.5 60 265-332 157-221 (279)
60 3zxf_A Galectin-7; sugar bindi 28.2 76 0.0026 25.7 4.9 43 373-415 8-58 (138)
61 2xzz_A Protein-glutamine gamma 27.5 2E+02 0.0069 22.0 7.0 64 344-411 19-86 (102)
62 2cqn_A Formin-binding protein 27.2 74 0.0025 23.2 4.2 53 95-148 7-62 (77)
63 2kdx_A HYPA, hydrogenase/ureas 25.2 59 0.002 25.7 3.6 36 219-255 62-99 (119)
64 2aus_D NOP10, ribosome biogene 23.7 40 0.0014 23.5 2.0 10 264-273 17-26 (60)
65 2wkk_A Galectin-2; sugar-bindi 23.7 1E+02 0.0035 25.4 5.0 42 374-415 10-57 (150)
66 3nyb_B Protein AIR2; polya RNA 23.3 62 0.0021 24.0 3.1 50 228-277 4-59 (83)
67 2apo_B Ribosome biogenesis pro 22.4 48 0.0016 23.1 2.1 10 264-273 18-27 (60)
68 2zhn_A Galectin-9; beta sandwi 21.8 1.4E+02 0.0049 24.3 5.5 43 373-415 17-67 (148)
69 1qo8_A Flavocytochrome C3 fuma 21.7 7.1 0.00024 39.9 -3.3 58 231-288 14-86 (566)
70 1y0p_A Fumarate reductase flav 20.9 4.3 0.00015 41.6 -5.2 57 231-287 13-88 (571)
71 2qkd_A Zinc finger protein ZPR 20.8 33 0.0011 33.6 1.4 31 246-276 12-53 (404)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=9.9e-62 Score=473.60 Aligned_cols=269 Identities=30% Similarity=0.553 Sum_probs=144.9
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCCCcccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~~~~~~ 158 (416)
+...|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|+.||+++..+... .++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~ 102 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Ccc
Confidence 455799999999999999999999999999999999974 578999999999999999999999999984322110 000
Q ss_pred CCCCCCCccCCCCCCceeccccccccchhhhhhhhhcC-------CCcccCCCeEEEEEeeeeecccCcceeeeeeeeee
Q 014884 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (416)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~~~~~F~~~f~~-------~~~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~ 231 (416)
.++.+ .+.+|. +.+|.++|+.+|++ ....++.|++++|.|+|+|+|+|+++.+.+++.+.
T Consensus 103 ----~~~~~--~~~~f~-------~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~ 169 (329)
T 3lz8_A 103 ----RQRQT--HEQSYS-------QQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVY 169 (329)
T ss_dssp -----------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEEC
T ss_pred ----ccccc--ccCCcC-------CCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEee
Confidence 00100 001110 01344556666643 12457899999999999999999999999987763
Q ss_pred cCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeeeEeeCCcEEeceEEEEEEecccccCCCEEE
Q 014884 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311 (416)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~ 311 (416)
| +. |.+ .+...++++|+||||+++|++|+
T Consensus 170 ~----g~-----------------G~v------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir 198 (329)
T 3lz8_A 170 N----VF-----------------GMI------------------------------ESETPKTLNVKIPAGVVDGQRIR 198 (329)
T ss_dssp C----SC-----------------C-C------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred c----CC-----------------eEE------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence 2 11 111 12335689999999999999999
Q ss_pred EcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcC
Q 014884 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRG 391 (416)
Q Consensus 312 ~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g 391 (416)
|+|+|+++..++.+|||||+|+|+||+.|+|+|+||+++++|+|+||++|++++|+||||++.|+||++++||+++||+|
T Consensus 199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G 278 (329)
T 3lz8_A 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKG 278 (329)
T ss_dssp ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETT
T ss_pred EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcC
Confidence 99999998777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 392 KGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 392 ~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+|||..+ .+|||||+|+|+||+
T Consensus 279 ~GmP~~~---~rGDL~v~~~V~~P~ 300 (329)
T 3lz8_A 279 KGLVSKT---HTGDLFAVIKIVMPT 300 (329)
T ss_dssp CSCBCSS---CBCCEEEEEEECCCS
T ss_pred CCCCCCC---CCCCEEEEEEEECCC
Confidence 9999763 479999999999995
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.8e-54 Score=407.66 Aligned_cols=215 Identities=29% Similarity=0.557 Sum_probs=200.2
Q ss_pred cccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--------CCcccCCCC
Q 014884 199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTC 270 (416)
Q Consensus 199 ~~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C 270 (416)
..+++|++++|.|||+|||+|+++++.+++.+.|+.|+|+|+..+. ..+|+.|+|+|++... .++++|+.|
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 3578999999999999999999999999999999999999998877 4899999999986421 246799999
Q ss_pred CCceEEe--eeeeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceE
Q 014884 271 KGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (416)
Q Consensus 271 ~G~G~~~--~~~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~ 348 (416)
+|+|+++ +++|..|+|.|++.+.++++|+||||+++|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+||+
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEEE
Confidence 9999999 8999999999999999999999999999999999999999975 568999999999999999999999999
Q ss_pred EEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 349 VDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 349 ~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++++|+|.||++|++++|+||||+ +.|+||++ ++||++++|+|+|||..+.. .+|||||+|+|+||+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~ 235 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPE 235 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCC
Confidence 999999999999999999999995 89999998 99999999999999986443 579999999999995
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=5.3e-42 Score=307.80 Aligned_cols=163 Identities=28% Similarity=0.484 Sum_probs=142.6
Q ss_pred CCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeee
Q 014884 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC 281 (416)
Q Consensus 202 g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C 281 (416)
++|++++|.|||+|||+|+++++.+++. |
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~--c------------------------------------------------- 30 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHK--R------------------------------------------------- 30 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEE--E-------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecc--c-------------------------------------------------
Confidence 4789999999999999999999987532 2
Q ss_pred eEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcC
Q 014884 282 MTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG 361 (416)
Q Consensus 282 ~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G 361 (416)
..|+|.|++.+.++++|+||||+++|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+||+++++|+|.||++|
T Consensus 31 ~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG 109 (181)
T 3agx_A 31 LNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 109 (181)
T ss_dssp ECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHC
T ss_pred CCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCC
Confidence 233333445667899999999999999999999999976 6789999999999999999999999999999999999999
Q ss_pred CeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 362 ~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
++++|+|+||+ +.|+||+++++|++++|+|+|||..+.++.+|||||+|+|+||+
T Consensus 110 ~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~ 165 (181)
T 3agx_A 110 CTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPE 165 (181)
T ss_dssp EEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCS
T ss_pred CEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCC
Confidence 99999999995 89999999999999999999999865444679999999999995
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.6e-41 Score=300.18 Aligned_cols=163 Identities=21% Similarity=0.351 Sum_probs=148.6
Q ss_pred cCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884 201 FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (416)
Q Consensus 201 ~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (416)
+++|++++|.|||+|||+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 4789999999999999999999999999888741
Q ss_pred eeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhc
Q 014884 281 CMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL 360 (416)
Q Consensus 281 C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~ 360 (416)
|++.+.++++|.||||+++|++|+|+|+|+++.+|+.+|||||+|+++||+.|+|+|+||+++++|+|.||++
T Consensus 36 -------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAll 108 (180)
T 2q2g_A 36 -------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALT 108 (180)
T ss_dssp -------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHH
T ss_pred -------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhC
Confidence 2345678999999999999999999999999666889999999999999999999999999999999999999
Q ss_pred CCeeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 361 GGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 361 G~~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
|++++|+||||+ +.|++|++++||++++|+|+|||..+.++.+|||||+|+|+||+
T Consensus 109 G~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~ 165 (180)
T 2q2g_A 109 GFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPK 165 (180)
T ss_dssp CEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCS
T ss_pred CCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCC
Confidence 999999999995 89999999999999999999999865445689999999999995
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=2.9e-39 Score=287.31 Aligned_cols=158 Identities=22% Similarity=0.380 Sum_probs=143.2
Q ss_pred CCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeeeeee
Q 014884 203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM 282 (416)
Q Consensus 203 ~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~ 282 (416)
+|++++|.|||+|||+|+++++.+++.. +
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~----------------------------------------------- 29 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P----------------------------------------------- 29 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence 4789999999999999999999997651 0
Q ss_pred EeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCcCCCCCceEEEEecCHHHHhcCC
Q 014884 283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG 362 (416)
Q Consensus 283 ~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f~r~G~DL~~~~~I~l~~Al~G~ 362 (416)
.|.+ +.++++|.||||+++|++|+|+|+|+++.+|+.+|||||+|+++||+.|+|+|+||+++++|++.+|++|+
T Consensus 30 ----~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~ 104 (170)
T 1c3g_A 30 ----HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGF 104 (170)
T ss_dssp ----TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCE
T ss_pred ----CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCC
Confidence 0122 45789999999999999999999999777788999999999999999999999999999999999999999
Q ss_pred eeEEecCCCe-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcCC
Q 014884 363 KVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT 416 (416)
Q Consensus 363 ~~~i~~ldg~-~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P~ 416 (416)
+++|+|+||+ +.|++|+++++|++++|+|+|||..+.++.+|||||+|+|.||+
T Consensus 105 ~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~ 159 (170)
T 1c3g_A 105 SKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPI 159 (170)
T ss_dssp EEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCS
T ss_pred eEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCC
Confidence 9999999996 89999999999999999999999864444679999999999995
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.88 E-value=3.6e-23 Score=169.67 Aligned_cols=79 Identities=33% Similarity=0.581 Sum_probs=74.0
Q ss_pred EeCCCcCCCCCceEEEEecCHHHHhcCCeeEEecCCCeEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEc
Q 014884 335 ADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414 (416)
Q Consensus 335 ~~h~~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~ 414 (416)
+||+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+++++|++++|+|+|||..+ .+|||||+|+|+|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~~~---~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCSS---CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCCCC---CCcCEEEEEEEEC
Confidence 6899999999999999999999999999999999999999999999999999999999999843 5799999999999
Q ss_pred CC
Q 014884 415 PT 416 (416)
Q Consensus 415 P~ 416 (416)
|+
T Consensus 79 P~ 80 (109)
T 3i38_A 79 PT 80 (109)
T ss_dssp CS
T ss_pred CC
Confidence 95
No 7
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.86 E-value=1.4e-22 Score=165.00 Aligned_cols=73 Identities=49% Similarity=0.802 Sum_probs=68.4
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~ 153 (416)
..|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876654
No 8
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=6.6e-22 Score=153.15 Aligned_cols=73 Identities=56% Similarity=0.853 Sum_probs=68.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
....|||+||||+++|+.++||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 4467999999999999999999999999999999999887889999999999999999999999999997654
No 9
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.8e-21 Score=160.76 Aligned_cols=77 Identities=32% Similarity=0.626 Sum_probs=68.6
Q ss_pred CcCCCCCceEEEEecCHHHHhcCCeeEEecCCCe-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEcC
Q 014884 339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415 (416)
Q Consensus 339 ~f~r~G~DL~~~~~I~l~~Al~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~~P 415 (416)
.|+|+|+||+++++|+|.+|++|++++|+|+||+ +.|+||+| +++|++++|+|+|||..+.+ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999996 89999999 99999999999999986543 57999999999999
Q ss_pred C
Q 014884 416 T 416 (416)
Q Consensus 416 ~ 416 (416)
+
T Consensus 80 ~ 80 (121)
T 1xao_A 80 E 80 (121)
T ss_dssp C
T ss_pred C
Confidence 5
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=2.8e-21 Score=148.85 Aligned_cols=71 Identities=45% Similarity=0.776 Sum_probs=65.9
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~ 152 (416)
..|||+||||+++||.++||+||++|++++|||++++ +.++++|++|++||++|+||.+|+.||.++..|.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 4699999999999999999999999999999999974 6788999999999999999999999999976554
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=150.27 Aligned_cols=73 Identities=47% Similarity=0.734 Sum_probs=66.8
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
+...|||+||||+++++.+|||+|||+|++++|||+++... .++++|++|++||++|+||.+|+.||.++..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 44579999999999999999999999999999999998653 68889999999999999999999999987654
No 12
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=3.9e-21 Score=151.88 Aligned_cols=72 Identities=51% Similarity=0.858 Sum_probs=66.5
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
....|||+||||+++|+.+|||+|||+|++++|||+++ +++++++|++|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 34579999999999999999999999999999999998 5788999999999999999999999999986543
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=5.1e-21 Score=147.76 Aligned_cols=72 Identities=44% Similarity=0.713 Sum_probs=66.5
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
....|||+||||+++|+.+|||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|+.||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34579999999999999999999999999999999997 4788999999999999999999999999987654
No 14
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=3.5e-21 Score=155.49 Aligned_cols=72 Identities=39% Similarity=0.638 Sum_probs=67.4
Q ss_pred CCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 77 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
..++..|||+||||+++|+.+|||+|||+|+++||||+++++++++++|++|++||++|+||.+|+.||...
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 346678999999999999999999999999999999999878889999999999999999999999999863
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=8.1e-21 Score=151.34 Aligned_cols=74 Identities=45% Similarity=0.710 Sum_probs=67.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~ 152 (416)
....|||+||||+++++.+|||+|||+|+++||||+++.. +.++++|++|++||++|+||.+|+.||..+..+.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 3457999999999999999999999999999999999865 4688999999999999999999999999976553
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=6.9e-21 Score=157.26 Aligned_cols=74 Identities=36% Similarity=0.560 Sum_probs=69.0
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~ 152 (416)
....|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..+.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 45689999999999999999999999999999999998778899999999999999999999999999976553
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.2e-20 Score=148.97 Aligned_cols=71 Identities=48% Similarity=0.792 Sum_probs=65.9
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
...|||+||||+++|+.+|||+|||+|++++|||++++ +.++++|++|++||++|+||.+|..||.++..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 45799999999999999999999999999999999974 678999999999999999999999999997543
No 18
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.82 E-value=1.4e-20 Score=143.30 Aligned_cols=68 Identities=38% Similarity=0.702 Sum_probs=61.9
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
....+||+||||+++|+.++||+||++|++++|||++++. .++|++|++||++|+||.+|+.||.+|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3457999999999999999999999999999999998754 5899999999999999999999999864
No 19
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.1e-20 Score=155.09 Aligned_cols=73 Identities=45% Similarity=0.735 Sum_probs=68.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
....+||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||.++..|
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 4567999999999999999999999999999999999888889999999999999999999999999986544
No 20
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=2.4e-20 Score=150.31 Aligned_cols=72 Identities=47% Similarity=0.738 Sum_probs=64.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~ 153 (416)
.|||+||||+++|+.+|||+|||+|++++|||++++. +.++++|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999865 45889999999999999999999999999766543
No 21
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.5e-20 Score=149.71 Aligned_cols=70 Identities=37% Similarity=0.663 Sum_probs=64.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g 151 (416)
....|||+||||+++|+.+|||+|||+|++++|||+++.+ .++|++|++||++|+||.+|+.||.++..+
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 4567999999999999999999999999999999999765 579999999999999999999999987544
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=2.9e-20 Score=148.73 Aligned_cols=71 Identities=32% Similarity=0.597 Sum_probs=65.0
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
+...|||+||||+++|+.+|||+|||+|+++||||+++.+ +.++++|++|++||++|+||.+|+.||....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4568999999999999999999999999999999998743 4588999999999999999999999999753
No 23
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2e-20 Score=152.40 Aligned_cols=99 Identities=32% Similarity=0.658 Sum_probs=89.3
Q ss_pred CCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC--C--CcccCCCCCCceEEe
Q 014884 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P--FTSTCSTCKGLGRII 277 (416)
Q Consensus 202 g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--~~~~C~~C~G~G~~~ 277 (416)
|.|+.++|.|+|+|||+|.++++.+.+.+.|+.|+|+|...+....+|+.|+|+|++... + ++++|+.|+|.|+++
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 80 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII 80 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence 467889999999999999999999999999999999999888888999999999987532 2 367999999999999
Q ss_pred eeeeeEeeCCcEEeceEEEEEEe
Q 014884 278 KDHCMTCKGSGVVDGVKEVKVTI 300 (416)
Q Consensus 278 ~~~C~~C~g~G~~~~~~~l~V~I 300 (416)
+++|..|+|.|++.+.++|+|++
T Consensus 81 ~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 81 ISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSCCSSSSSCSEECCCCSSCCSC
T ss_pred CCcCCCCCCeeEEEEEEEEEEEc
Confidence 99999999999999988887764
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.76 E-value=2.8e-19 Score=146.90 Aligned_cols=70 Identities=34% Similarity=0.576 Sum_probs=64.6
Q ss_pred CcCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 80 SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a-~~~eik~ayr~la~~~HPD~~~~---~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
...|||+||||+++| +.+|||+|||+|++++|||++++ .+.++++|++|++||++|+||.+|+.||.++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 457999999999999 99999999999999999999975 35688999999999999999999999999853
No 25
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.74 E-value=2.3e-18 Score=156.76 Aligned_cols=100 Identities=18% Similarity=0.329 Sum_probs=74.3
Q ss_pred ccccccccccccccccccCCCchhhhhhcccccCCCCCCcCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh
Q 014884 42 HKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP 119 (416)
Q Consensus 42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~ 119 (416)
....||+|+..... . ....+++..|... +++....|||+||||+++ ++.++||+|||+|+++||||++++.+
T Consensus 9 ~~~~Cw~C~~~~~~---~-~~~~~fC~~c~~~--q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~ 82 (207)
T 3bvo_A 9 NYPRCWNCGGPWGP---G-REDRFFCPQCRAL--QAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS 82 (207)
T ss_dssp --CBCSSSCCBCCS---S-CSCCCBCTTTCCB--CCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC
T ss_pred CCCCCCCCCCCccc---c-ccccccccccccc--CCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 45679999864210 0 1122334334332 223346799999999986 79999999999999999999988654
Q ss_pred h-----HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 014884 120 S-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (416)
Q Consensus 120 ~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~ 147 (416)
+ |.++|++||+||+||+||.+|+.||..
T Consensus 83 ~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 83 QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 2 567899999999999999999999975
No 26
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.74 E-value=1.3e-18 Score=159.31 Aligned_cols=72 Identities=46% Similarity=0.760 Sum_probs=67.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~ 153 (416)
.|||+||||+++|+.+|||+|||+|++++|||+++++++++++|++|++||++|+||.+|+.||+++..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 589999999999999999999999999999999988888999999999999999999999999999876543
No 27
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.3e-18 Score=136.39 Aligned_cols=62 Identities=32% Similarity=0.552 Sum_probs=58.1
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhh
Q 014884 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQ 143 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~ 143 (416)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.++++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999974 6788999999999999999999874
No 28
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.73 E-value=2.3e-18 Score=150.50 Aligned_cols=70 Identities=31% Similarity=0.588 Sum_probs=64.1
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP------SAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
+...|||+||||+++|+.++||+|||+|++++|||++++.+ .|.++|++|++||++|+||.+|+.||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45679999999999999999999999999999999987653 36789999999999999999999999864
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.73 E-value=1.7e-18 Score=136.09 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=60.8
Q ss_pred CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhhhhhhhhh
Q 014884 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ 143 (416)
Q Consensus 76 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~ 143 (416)
...+...++|+||||+++||.+|||+|||+|+++||||++++++ +|+++|++|++||++|+|...|..
T Consensus 10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 34456689999999999999999999999999999999998763 588999999999999999988743
No 30
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.70 E-value=1.1e-17 Score=129.07 Aligned_cols=60 Identities=18% Similarity=0.344 Sum_probs=55.7
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014884 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYD 145 (416)
Q Consensus 82 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd 145 (416)
.++|+||||+++ ++.++||+|||+||+++|||++++ .++|++|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 589999999999 999999999999999999999864 589999999999999999998844
No 31
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.69 E-value=2.5e-18 Score=141.60 Aligned_cols=65 Identities=23% Similarity=0.390 Sum_probs=60.3
Q ss_pred cCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 81 KRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~~--~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
..+||+||||+++|+. ++||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||.++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 3689999999999999 999999999999999999875 4799999999999999999999998753
No 32
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.69 E-value=1.4e-17 Score=147.80 Aligned_cols=68 Identities=31% Similarity=0.515 Sum_probs=62.1
Q ss_pred cCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~--~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
..|||+||||+++++ .++||+|||+|+++||||++++.+. |.++|+.|++||++|+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 469999999999988 9999999999999999999887654 6789999999999999999999999864
No 33
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.68 E-value=6.5e-18 Score=148.56 Aligned_cols=65 Identities=23% Similarity=0.386 Sum_probs=57.7
Q ss_pred cCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 81 ~~~~y~iLgv~~~a~--~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
..|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 368999999999998 6999999999999999999875 3789999999999999999999999874
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.66 E-value=3.8e-17 Score=144.52 Aligned_cols=65 Identities=22% Similarity=0.471 Sum_probs=60.1
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhhhhhhhhhh
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQY 144 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~y 144 (416)
...|||+||||+++|+.+|||+|||+|++++|||++++.+. |+++|++|++||++|+||.+|+.|
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 34699999999999999999999999999999999876553 889999999999999999999987
No 35
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.66 E-value=3.7e-17 Score=144.66 Aligned_cols=67 Identities=30% Similarity=0.480 Sum_probs=61.5
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 014884 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (416)
Q Consensus 83 ~~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~ 149 (416)
|||+||||++++ |.++||++||+|+++||||++++.++ |.++|+.||+||+||+||.+|+.||....
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 99999999999999999999986543 56799999999999999999999999743
No 36
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.64 E-value=7.1e-17 Score=127.17 Aligned_cols=56 Identities=21% Similarity=0.440 Sum_probs=52.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhhh
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRD 137 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~~L~d 137 (416)
.++|++|||+++||.+|||+|||++|++||||++++++ .|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998654 388999999999999986
No 37
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.4e-16 Score=120.33 Aligned_cols=59 Identities=15% Similarity=0.278 Sum_probs=53.1
Q ss_pred CCcCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhh
Q 014884 79 SSKRDPYELLGVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (416)
Q Consensus 79 ~~~~~~y~iLgv~~-~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r 141 (416)
+...++|+||||++ +++.+|||+|||+|++++|||++++ .++|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 44569999999999 7999999999999999999999753 46999999999999998766
No 38
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.60 E-value=2.7e-16 Score=140.11 Aligned_cols=67 Identities=28% Similarity=0.483 Sum_probs=60.3
Q ss_pred CCcCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 014884 79 SSKRDPYELL------GVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (416)
Q Consensus 79 ~~~~~~y~iL------gv~~-~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~ 148 (416)
....|||+|| |+++ +||.++||+|||+|++++|||++++ +.++|++|++||+||+||.+|+.||...
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3457999999 4665 8999999999999999999999975 5689999999999999999999999965
No 39
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=3.1e-16 Score=127.44 Aligned_cols=59 Identities=14% Similarity=0.222 Sum_probs=52.2
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----hHHHHHHHHHHHHHHhhhhh
Q 014884 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NP----SAKRKFQEIRDAYETLRDSE 139 (416)
Q Consensus 80 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~----~a~~~f~~i~~Ay~~L~d~~ 139 (416)
...|||+||+++. ||.+|||+|||+||+++|||++++ ++ .|+++|++|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 999999999999999999999763 22 47899999999999999975
No 40
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.55 E-value=4.8e-16 Score=168.79 Aligned_cols=75 Identities=44% Similarity=0.730 Sum_probs=40.9
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCC
Q 014884 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~~~~g~~ 153 (416)
....|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..|..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 456799999999999999999999999999999999987788999999999999999999999999999876654
No 41
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.31 E-value=2.3e-12 Score=120.69 Aligned_cols=130 Identities=25% Similarity=0.402 Sum_probs=93.1
Q ss_pred EEEEeeeeecccCcceeeee-eeeeecCCCCCCCCCCC---------CcccccCCCcceeEEEeCCCcccCCCCCCceEE
Q 014884 207 VELVLSFAEAAKGCTKHVSF-DAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (416)
Q Consensus 207 ~~l~isl~e~~~G~~~~~~~-~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (416)
.++.++-...+..|...-.- .....|+.|+|+|.... ....+|+.|+|.|.+. ....+|..|+|.|.+
T Consensus 31 k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i--~~~~~C~~C~G~g~~ 108 (248)
T 1nlt_A 31 AKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII--DPKDRCKSCNGKKVE 108 (248)
T ss_dssp EEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC--CTTSBCSSSTTSCEE
T ss_pred EEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe--ccCCCCcccCCCceE
Confidence 34555555554433322110 11378999999997421 2356899999999862 126799999999998
Q ss_pred eeeeeeEeeCC-cEEeceE-------------------------------------------------------------
Q 014884 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (416)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (416)
.+.+-.+...+ |+.++++
T Consensus 109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 188 (248)
T 1nlt_A 109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188 (248)
T ss_dssp EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence 77666666664 5555544
Q ss_pred -EEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCC
Q 014884 295 -EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (416)
Q Consensus 295 -~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~ 338 (416)
.++|.|||| +++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus 189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~ 235 (248)
T 1nlt_A 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE 235 (248)
T ss_dssp CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC
T ss_pred CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCC
Confidence 689999999 99999999999999865443579999999999443
No 42
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.27 E-value=1.3e-12 Score=100.65 Aligned_cols=74 Identities=38% Similarity=0.885 Sum_probs=64.1
Q ss_pred CcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeC----CCcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (416)
Q Consensus 219 G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (416)
|.+++|.+.+.+.|+.|+|+|........+|+.|+|+|++... .++.+|+.|+|.|++++++|..|+|.|++.+
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER 78 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence 5678899999999999999998776667899999999987532 1356899999999999999999999998754
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.92 E-value=5.7e-10 Score=110.95 Aligned_cols=65 Identities=46% Similarity=0.710 Sum_probs=55.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014884 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDR 146 (416)
Q Consensus 82 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~ 146 (416)
.++|++||+.+.++.++|+++|+++++++|||+.+.. .+++++|++|++||++|+||.+|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999998754 3488999999999999999999999997
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.85 E-value=2e-09 Score=78.90 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=46.5
Q ss_pred CCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 014884 82 RDPYELLGVPEN---ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (416)
Q Consensus 82 ~~~y~iLgv~~~---a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~ 138 (416)
.+.|.||||+++ ++.++|+++||+|....|||+.++ .-...+|++|++.|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 356899999999 999999999999999999999864 35667899999999754
No 45
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.80 E-value=4.7e-09 Score=85.54 Aligned_cols=74 Identities=23% Similarity=0.351 Sum_probs=60.8
Q ss_pred ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (416)
Q Consensus 200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (416)
+.|.|+.+++.|+|.||+.|+++.+..-
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl---------------------------------------------------- 36 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL---------------------------------------------------- 36 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence 4588999999999999999987665420
Q ss_pred eeeEeeCCcEEeceEEEEEEecccccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCCc
Q 014884 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF 340 (416)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~f 340 (416)
++ .++|.||+|+++|++++++|+|.+. .+ ..|||||+|+|.-....
T Consensus 37 -----------dG--~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~L 82 (109)
T 3i38_A 37 -----------KE--SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKP 82 (109)
T ss_dssp -----------SS--CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSC
T ss_pred -----------CC--CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCC
Confidence 11 3689999999999999999999987 34 78999999999854443
No 46
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.74 E-value=1.7e-08 Score=89.80 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=57.7
Q ss_pred CCCceEEEEecCHHHHhcCCeeEEecCC------------CeEEEEeCCCCCCCcEEEEcCCCcC-CCCCCCCCCcEEEE
Q 014884 343 DGADVYVDSNISFTQAILGGKVDVPTLS------------GKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVR 409 (416)
Q Consensus 343 ~G~DL~~~~~I~l~~Al~G~~~~i~~ld------------g~~~v~ip~g~~~g~~~~l~g~G~p-~~~~~~~~Gdl~v~ 409 (416)
+|.|+.+++.|||.||+.|++++|.... ..++|+||+|+.+|++|+++|+|-+ ..+. ..|||||+
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg--~~GDl~v~ 79 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGT--SPGDLVLI 79 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTS--CCCEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCC--ccccEEEE
Confidence 3789999999999999999998887532 3478999999999999999999987 4442 46999999
Q ss_pred EEEE
Q 014884 410 FRVN 413 (416)
Q Consensus 410 ~~v~ 413 (416)
+++.
T Consensus 80 i~~~ 83 (180)
T 2q2g_A 80 IQTK 83 (180)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9885
No 47
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.8e-08 Score=83.61 Aligned_cols=76 Identities=20% Similarity=0.140 Sum_probs=58.4
Q ss_pred ccCCCeEEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCCcccccCCCcceeEEEeCCCcccCCCCCCceEEeee
Q 014884 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (416)
Q Consensus 200 ~~g~di~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (416)
+.|.|+.+++.|+|.+|+.|++..+..-
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------- 31 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV---------------------------------------------------- 31 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence 4589999999999999999987665410
Q ss_pred eeeEeeCCcEEeceEEEEEEeccc--ccCCCEEEEcCccCCCCCCCCCccEEEEEEEEeCCC
Q 014884 280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (416)
Q Consensus 280 ~C~~C~g~G~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDl~v~i~v~~h~~ 339 (416)
..+.++|.||+| +++|++++++|+|.+...+...|||||+++|.-...
T Consensus 32 ------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~ 81 (121)
T 1xao_A 32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPEN 81 (121)
T ss_dssp ------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCT
T ss_pred ------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence 012578999999 999999999999998654436799999999995443
No 48
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.72 E-value=2.3e-08 Score=88.13 Aligned_cols=68 Identities=13% Similarity=0.202 Sum_probs=56.9
Q ss_pred CceEEEEecCHHHHhcCCeeEEecC----CC-----eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 014884 345 ADVYVDSNISFTQAILGGKVDVPTL----SG-----KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN 413 (416)
Q Consensus 345 ~DL~~~~~I~l~~Al~G~~~~i~~l----dg-----~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~v~ 413 (416)
.|+.+++.|||.||+.|++++|... .| .++|+||+|+.+|++|+++|+|-+.... +..|||||++++.
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g-g~~GDl~v~i~v~ 77 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK 77 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCC-CccccEEEEEEEc
Confidence 3899999999999999999988754 12 3799999999999999999999864321 2469999999985
No 49
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.71 E-value=1.4e-08 Score=98.75 Aligned_cols=72 Identities=22% Similarity=0.397 Sum_probs=57.6
Q ss_pred CCCCCceEEEEecCHHHHhcCCeeEEecC------CC--------eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcE
Q 014884 341 SRDGADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQ 406 (416)
Q Consensus 341 ~r~G~DL~~~~~I~l~~Al~G~~~~i~~l------dg--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl 406 (416)
.+.|.||.+++.|+|.||+.|+++.|... .| .++|+||+|+++|++||++|+|.|..+. +..|||
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL 215 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDL 215 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCE
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcE
Confidence 35788999999999999999987766543 22 3689999999999999999999986522 246999
Q ss_pred EEEEEEE
Q 014884 407 YVRFRVN 413 (416)
Q Consensus 407 ~v~~~v~ 413 (416)
||+|+|.
T Consensus 216 ~v~I~v~ 222 (329)
T 3lz8_A 216 WLVIHIA 222 (329)
T ss_dssp EEEECCC
T ss_pred EEEEEEe
Confidence 9998775
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.68 E-value=2.9e-08 Score=88.34 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=54.9
Q ss_pred CCceEEEEecCHHHHhcCCeeEEecC------CC--------eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEE
Q 014884 344 GADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR 409 (416)
Q Consensus 344 G~DL~~~~~I~l~~Al~G~~~~i~~l------dg--------~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~ 409 (416)
|.|+.+++.|||.||+.|++++|... .| .++|+||+|+.+|++|+++|+|-+..+ +..|||||+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~--g~~GDl~v~ 79 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN--NIPADIVFV 79 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS--SCCCCEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC--CCcccEEEE
Confidence 57999999999999999999887642 23 268999999999999999999988654 346999999
Q ss_pred EEEE
Q 014884 410 FRVN 413 (416)
Q Consensus 410 ~~v~ 413 (416)
+++.
T Consensus 80 i~~~ 83 (181)
T 3agx_A 80 LKDK 83 (181)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9885
No 51
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.46 E-value=6.4e-05 Score=60.31 Aligned_cols=49 Identities=27% Similarity=0.694 Sum_probs=38.9
Q ss_pred eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEeeee
Q 014884 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (416)
....|+.|+|+|.... ....+|+.|+|.|.+ +..+|..|+|.|++.+.+
T Consensus 44 ~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~~~k 97 (104)
T 2ctt_A 44 KVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI----IISPCVVCRGAGQAKQKK 97 (104)
T ss_dssp CCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----CSSCCSSSSSCSEECCCC
T ss_pred CCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----CCCcCCCCCCeeEEEEEE
Confidence 3578999999996421 234689999999998 567999999999987543
No 52
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.40 E-value=5.9e-05 Score=57.26 Aligned_cols=47 Identities=32% Similarity=0.807 Sum_probs=36.3
Q ss_pred eeeecCCCCCCCCCCC-----CcccccCCCcceeEEEeCCCcccCCCCCCceEEee
Q 014884 228 AFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (416)
....|+.|+|+|.... .....|+.|+|.|.+ +..+|+.|+|.|.+.+
T Consensus 27 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVER 78 (79)
T ss_dssp CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEEC
T ss_pred cCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE----CCCcCCCCCCeEEEee
Confidence 3568999999996532 123589999999987 4678999999998753
No 53
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.40 E-value=7.4e-06 Score=85.85 Aligned_cols=70 Identities=17% Similarity=0.320 Sum_probs=56.1
Q ss_pred EEEEEeeeeecccCcceeeeeeeeeecCCCCCCCCCCCC---cccccCCCcceeEEEeC-----------------CCcc
Q 014884 206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADA---KTKICSTCRGIGRVTIP-----------------PFTS 265 (416)
Q Consensus 206 ~~~l~isl~e~~~G~~~~~~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G~~~~~-----------------~~~~ 265 (416)
.+++.|+|+|++.|.++++.+.+...|..|+|+|...+. ...+|+.|+|.....-+ ....
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 357889999999999999999999999999999998776 57899999998311100 0135
Q ss_pred cCCCCCCceE
Q 014884 266 TCSTCKGLGR 275 (416)
Q Consensus 266 ~C~~C~G~G~ 275 (416)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7999988764
No 54
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.36 E-value=3.4e-05 Score=53.79 Aligned_cols=30 Identities=37% Similarity=0.836 Sum_probs=21.1
Q ss_pred CcccCCCCCCceEEeeeeeeEeeCCcEEec
Q 014884 263 FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (416)
Q Consensus 263 ~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (416)
++++|+.|+|+|.++.++|+.|+|.|++..
T Consensus 8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 8 LETTCPNCNGSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence 355677777777777777777777776654
No 55
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.67 E-value=0.00088 Score=46.58 Aligned_cols=26 Identities=38% Similarity=0.917 Sum_probs=13.7
Q ss_pred ccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (416)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (416)
+|+.|+|+|.+ +..+|+.|+|.|.+.
T Consensus 11 ~C~~C~GsG~~----i~~~C~~C~G~G~v~ 36 (53)
T 3lcz_A 11 TCPNCNGSGRE----EPEPCPKCLGKGVIL 36 (53)
T ss_dssp ECTTTTTSCEE----TTEECTTTTTSSEEE
T ss_pred cCcCCcccccC----CCCcCCCCCCcEEEE
Confidence 45555555544 334566666666554
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.61 E-value=0.00099 Score=46.31 Aligned_cols=10 Identities=30% Similarity=0.806 Sum_probs=4.7
Q ss_pred ecCCCCCCCC
Q 014884 231 PCDSCHGRGF 240 (416)
Q Consensus 231 ~C~~C~G~G~ 240 (416)
.|+.|+|+|.
T Consensus 11 ~C~~C~GsG~ 20 (53)
T 2bx9_A 11 ACPKCERAGE 20 (53)
T ss_dssp ECTTTTTSSE
T ss_pred cCCCCcceec
Confidence 4444444443
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.58 E-value=0.00051 Score=47.77 Aligned_cols=27 Identities=30% Similarity=0.818 Sum_probs=14.7
Q ss_pred cccCCCcceeEEEeCCCcccCCCCCCceEEe
Q 014884 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (416)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (416)
.+|+.|+|+|.+ ...+|+.|+|.|+++
T Consensus 10 ~~C~~C~GsG~~----~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 10 VACPKCERAGEI----EGTPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEE----TTEECTTTTTSSEEE
T ss_pred ccCCCCcceecc----CCCCCccCCCCccEE
Confidence 356666666655 234555555555544
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=88.02 E-value=0.3 Score=51.48 Aligned_cols=48 Identities=15% Similarity=0.267 Sum_probs=37.9
Q ss_pred CCcCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHH
Q 014884 79 SSKRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET 134 (416)
Q Consensus 79 ~~~~~~y~iLgv~~~a~~--~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~ 134 (416)
....+||.+||++.++.. .+|++|||+||+..+++ ++++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 334569999999776655 67999999999975433 5789999999876
No 59
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=37.81 E-value=58 Score=29.89 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=28.7
Q ss_pred ccCCCCCCceEEee-eeeeEeeCCcEEeceEEEEEEeccc-ccCCC---EEEEcCccCCCCCCCCCccEEEEE
Q 014884 265 STCSTCKGLGRIIK-DHCMTCKGSGVVDGVKEVKVTIPAG-VDSGD---TIRVPEAGNAGGRGRQHGNLFIKL 332 (416)
Q Consensus 265 ~~C~~C~G~G~~~~-~~C~~C~g~G~~~~~~~l~V~Ip~G-~~~G~---~i~~~g~G~~~~~g~~~GDl~v~i 332 (416)
..|+.|++.|.... ..|. . ...++++|.=+|. +..|+ .+.+-=.++-. ....|||-+...
T Consensus 157 ~~Cp~C~~~~f~l~~~~s~------f-~D~Q~ikiQE~pe~vp~G~~Prsi~V~l~~dLv-d~~~PGDrV~vt 221 (279)
T 1ltl_A 157 SLCSECGGRSFRLLQDESE------F-LDTQTLKLQEPLENLSGGEQPRQITVVLEDDLV-DTLTPGDIVRVT 221 (279)
T ss_dssp SCCTTTCCCCEEECGGGCE------E-EEEEEEEEECCSTTCCSSCCCCEEEEEEEGGGT-TCCCTTCEEEEE
T ss_pred CcCCCCCCCCcEEeccccE------E-EeeEEEEEecCcccCCCCCCCeEEEEEEccccc-CccCCCCEEEEE
Confidence 46777777774332 2222 1 2334666654332 34443 23333333332 345688876643
No 60
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=28.16 E-value=76 Score=25.72 Aligned_cols=43 Identities=21% Similarity=0.370 Sum_probs=30.3
Q ss_pred EEEEeCCCCCCCcEEEEcCCCcCCCC--------CCCCCCcEEEEEEEEcC
Q 014884 373 VQVKIPKGVQPGQLLVLRGKGLAKNG--------LFLDHGDQYVRFRVNFP 415 (416)
Q Consensus 373 ~~v~ip~g~~~g~~~~l~g~G~p~~~--------~~~~~Gdl~v~~~v~~P 415 (416)
..-.||.|+++|+.|+|.|.=.+... ......|+.++|++.|.
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~ 58 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLD 58 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcC
Confidence 35678999999999999875333221 11124699999999875
No 61
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=27.50 E-value=2e+02 Score=21.96 Aligned_cols=64 Identities=6% Similarity=-0.021 Sum_probs=42.4
Q ss_pred CCceEEEE--ecCHHHHhcCCeeEEecCCC--eEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEE
Q 014884 344 GADVYVDS--NISFTQAILGGKVDVPTLSG--KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFR 411 (416)
Q Consensus 344 G~DL~~~~--~I~l~~Al~G~~~~i~~ldg--~~~v~ip~g~~~g~~~~l~g~G~p~~~~~~~~Gdl~v~~~ 411 (416)
|.++.+++ .=+|.++|.++.+.|+..+= ...+.++. +.||+.+++.-+=.|...+. --|++.|+
T Consensus 19 ~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~-v~pg~~~~~~~~~~P~~~G~---~~L~a~f~ 86 (102)
T 2xzz_A 19 GQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGD-IGGNETVTLRQSFVPVRPGP---RQLIASLD 86 (102)
T ss_dssp SSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEEECC-BCTTCEEEEEEEECCCSCSS---CCCEEEEE
T ss_pred CCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEEcCc-CCCCCEEEEEEEEecCcccc---eEEEEEEE
Confidence 44554443 34888999999999987542 34566644 89999998876666765322 45666664
No 62
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=27.17 E-value=74 Score=23.20 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCCh--hHHHHHHHHHHHHHHhhh-hhhhhhhcccc
Q 014884 95 SQDEIKKAFHMLAKQYHPDANKNNP--SAKRKFQEIRDAYETLRD-SEKRAQYDRRR 148 (416)
Q Consensus 95 ~~~eik~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~~L~d-~~~r~~yd~~~ 148 (416)
-...++.+|+.+.+...|.....+. .+..+|..-. +|..+.+ ..++.+|+.|.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 4566899999998888888776543 3555666544 7998865 67778888763
No 63
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=25.25 E-value=59 Score=25.67 Aligned_cols=36 Identities=17% Similarity=0.363 Sum_probs=17.3
Q ss_pred Ccceeeee-eeeeecCCCCCCCCCCCCccc-ccCCCcce
Q 014884 219 GCTKHVSF-DAFVPCDSCHGRGFPADAKTK-ICSTCRGI 255 (416)
Q Consensus 219 G~~~~~~~-~~~~~C~~C~G~G~~~~~~~~-~C~~C~G~ 255 (416)
|+...+.. .....|..|.-.-.. ..... .||.|++.
T Consensus 62 ~a~L~i~~~p~~~~C~~CG~~~e~-~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 62 DAILDIVDEKVELECKDCSHVFKP-NALDYGVCEKCHSK 99 (119)
T ss_dssp SCCEEEEEECCEEECSSSSCEECS-CCSTTCCCSSSSSC
T ss_pred CcEEEEEeccceEEcCCCCCEEeC-CCCCCCcCccccCC
Confidence 44444332 345668777544322 22334 56666554
No 64
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=23.68 E-value=40 Score=23.49 Aligned_cols=10 Identities=30% Similarity=0.740 Sum_probs=5.4
Q ss_pred cccCCCCCCc
Q 014884 264 TSTCSTCKGL 273 (416)
Q Consensus 264 ~~~C~~C~G~ 273 (416)
...|+.|++.
T Consensus 17 k~~CP~CG~~ 26 (60)
T 2aus_D 17 KETCPVCGEK 26 (60)
T ss_dssp SSBCTTTCSB
T ss_pred cccCcCCCCc
Confidence 4456666554
No 65
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=23.67 E-value=1e+02 Score=25.43 Aligned_cols=42 Identities=14% Similarity=0.295 Sum_probs=28.8
Q ss_pred EEEeCCCCCCCcEEEEcCCCcCC-CCC-----CCCCCcEEEEEEEEcC
Q 014884 374 QVKIPKGVQPGQLLVLRGKGLAK-NGL-----FLDHGDQYVRFRVNFP 415 (416)
Q Consensus 374 ~v~ip~g~~~g~~~~l~g~G~p~-~~~-----~~~~Gdl~v~~~v~~P 415 (416)
.+.||.+.++|+.|+|.|.=.+. .+. ....+|+.++|++.|.
T Consensus 10 ~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~ 57 (150)
T 2wkk_A 10 QVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPG 57 (150)
T ss_dssp EEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETT
T ss_pred ceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecC
Confidence 57788899999999998842221 110 0112589999999875
No 66
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=23.35 E-value=62 Score=24.02 Aligned_cols=50 Identities=18% Similarity=0.237 Sum_probs=27.5
Q ss_pred eeeecCCCCCCCCCCCCc--ccccCCCcceeEEEeC----CCcccCCCCCCceEEe
Q 014884 228 AFVPCDSCHGRGFPADAK--TKICSTCRGIGRVTIP----PFTSTCSTCKGLGRII 277 (416)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~--~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~ 277 (416)
+.+.|..|...|.....= ...|-.|...|.+... .-...|-.|+..|.+-
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p~~~~~CYnCG~~GH~~ 59 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPFHTIYCYNCGGKGHFG 59 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC-------------CCCBCSSSSCBSSCG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccCCCCCCeecccCCCCcCc
Confidence 456799999888764321 2357778877764321 1246799999998765
No 67
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=22.40 E-value=48 Score=23.11 Aligned_cols=10 Identities=20% Similarity=0.640 Sum_probs=4.9
Q ss_pred cccCCCCCCc
Q 014884 264 TSTCSTCKGL 273 (416)
Q Consensus 264 ~~~C~~C~G~ 273 (416)
...|+.|++.
T Consensus 18 k~~CP~CG~~ 27 (60)
T 2apo_B 18 KEICPKCGEK 27 (60)
T ss_dssp SSBCSSSCSB
T ss_pred cccCcCCCCc
Confidence 3445555543
No 68
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A*
Probab=21.79 E-value=1.4e+02 Score=24.30 Aligned_cols=43 Identities=21% Similarity=0.284 Sum_probs=29.8
Q ss_pred EEEEeCCCCCCCcEEEEcCCCc-CCC-----CC-CC-CCCcEEEEEEEEcC
Q 014884 373 VQVKIPKGVQPGQLLVLRGKGL-AKN-----GL-FL-DHGDQYVRFRVNFP 415 (416)
Q Consensus 373 ~~v~ip~g~~~g~~~~l~g~G~-p~~-----~~-~~-~~Gdl~v~~~v~~P 415 (416)
....||.+..+|+.++|.|.=+ +.. +- .+ ..+|+.++|++.|.
T Consensus 17 ~~~~i~~gl~~G~~i~I~G~~~~~~~~rF~Inl~~g~~~~dialHfnpRf~ 67 (148)
T 2zhn_A 17 FSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFE 67 (148)
T ss_dssp EEEECTTCCCTTCEEEEEEEECSSSCSBEEEEEESSSSSSCEEEEEEEECS
T ss_pred EEEECCCCCccCCEEEEEEEECCCCCCEEEEEEeeCCCCCCEEEEEEEEEC
Confidence 4678999999999999988432 111 10 01 13699999999875
No 69
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=21.73 E-value=7.1 Score=39.93 Aligned_cols=58 Identities=22% Similarity=0.489 Sum_probs=36.7
Q ss_pred ecCCCCCCCCCCCC----cccccCCCcceeEEEe------CC-----CcccCCCCCCceEEeeeeeeEeeCCc
Q 014884 231 PCDSCHGRGFPADA----KTKICSTCRGIGRVTI------PP-----FTSTCSTCKGLGRIIKDHCMTCKGSG 288 (416)
Q Consensus 231 ~C~~C~G~G~~~~~----~~~~C~~C~G~G~~~~------~~-----~~~~C~~C~G~G~~~~~~C~~C~g~G 288 (416)
.|..|++.+..... ....|-.||+...... .+ -...|..|+..-......|..|+...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEEPKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSCCCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcCcCchhhhhcCCC
Confidence 69999988653211 2347999997522110 01 13579999876655567899997643
No 70
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=20.87 E-value=4.3 Score=41.62 Aligned_cols=57 Identities=21% Similarity=0.416 Sum_probs=36.4
Q ss_pred ecCCCCCCCCCCC-----CcccccCCCcceeEEEe--------C-----C-CcccCCCCCCceEEeeeeeeEeeCC
Q 014884 231 PCDSCHGRGFPAD-----AKTKICSTCRGIGRVTI--------P-----P-FTSTCSTCKGLGRIIKDHCMTCKGS 287 (416)
Q Consensus 231 ~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~--------~-----~-~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (416)
.|..|++...... .....|-.||....... . . -...|..|+..=......|..|+..
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEKSMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSCBCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccCCCccccccChh
Confidence 7999998864322 13468999997532110 0 0 1457999987644455789999874
No 71
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=20.83 E-value=33 Score=33.57 Aligned_cols=31 Identities=19% Similarity=0.466 Sum_probs=19.5
Q ss_pred ccccCCCcceeEEEeC----C-------CcccCCCCCCceEE
Q 014884 246 TKICSTCRGIGRVTIP----P-------FTSTCSTCKGLGRI 276 (416)
Q Consensus 246 ~~~C~~C~G~G~~~~~----~-------~~~~C~~C~G~G~~ 276 (416)
...|+.|+..|...+. | +...|+.|+=+-.-
T Consensus 12 ~s~Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyrn~e 53 (404)
T 2qkd_A 12 ESLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWNNTE 53 (404)
T ss_dssp EEECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCEEEE
T ss_pred cccCCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCchhe
Confidence 4578888877764321 2 25679999855443
Done!