BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>014887
MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI
EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIAHTGI
GGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ
LEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNS
TFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEP
KEIVEEPMLQQTELKWRKDLKESKFLSSIGKDRGPGELSIGSGSFPAGRFKASNEDEHFQ
DQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDLNGFSWN

High Scoring Gene Products

Symbol, full name Information P value
MYR2 protein from Arabidopsis thaliana 1.6e-116
MYR1
myb-related protein 1
protein from Arabidopsis thaliana 1.1e-112
AT1G69580 protein from Arabidopsis thaliana 8.3e-51
AT3G24120 protein from Arabidopsis thaliana 1.7e-41
UNE16
unfertilized embryo sac 16
protein from Arabidopsis thaliana 4.6e-41
AT5G45580 protein from Arabidopsis thaliana 2.2e-34
APL
ALTERED PHLOEM DEVELOPMENT
protein from Arabidopsis thaliana 5.6e-29
AT5G06800 protein from Arabidopsis thaliana 1.2e-27
AT2G20400 protein from Arabidopsis thaliana 1.0e-26
AT3G12730 protein from Arabidopsis thaliana 7.6e-25
AT2G01060 protein from Arabidopsis thaliana 9.2e-21
PHL1
AT5G29000
protein from Arabidopsis thaliana 2.8e-18
AT3G04450 protein from Arabidopsis thaliana 1.5e-17
PHR1
phosphate starvation response 1
protein from Arabidopsis thaliana 8.2e-16
AT3G13040 protein from Arabidopsis thaliana 8.5e-16
AT2G42660 protein from Arabidopsis thaliana 9.4e-15
AT1G14600 protein from Arabidopsis thaliana 3.3e-14
AT2G38300 protein from Arabidopsis thaliana 6.1e-14
AT2G06020 protein from Arabidopsis thaliana 8.2e-14
MYBC1
AT2G40970
protein from Arabidopsis thaliana 1.2e-13
AT2G02060 protein from Arabidopsis thaliana 2.1e-13
BOA
AT5G59570
protein from Arabidopsis thaliana 3.2e-12
AT2G40260 protein from Arabidopsis thaliana 3.9e-12
AT4G04580 protein from Arabidopsis thaliana 5.1e-12
KAN
KANADI
protein from Arabidopsis thaliana 1.4e-11
KAN2
AT1G32240
protein from Arabidopsis thaliana 1.6e-11
AT3G10760 protein from Arabidopsis thaliana 1.7e-11
RL9
Probable transcription factor RL9
protein from Oryza sativa Japonica Group 5.5e-11
ATS
AT5G42630
protein from Arabidopsis thaliana 5.8e-11
RR1
AT3G16857
protein from Arabidopsis thaliana 8.6e-11
AT5G05090 protein from Arabidopsis thaliana 1.0e-10
KAN3
AT4G17695
protein from Arabidopsis thaliana 2.1e-10
GLK1
Probable transcription factor GLK1
protein from Oryza sativa Japonica Group 2.4e-10
RR14
AT2G01760
protein from Arabidopsis thaliana 2.7e-10
RR2
AT4G16110
protein from Arabidopsis thaliana 2.9e-10
AT2G03500 protein from Arabidopsis thaliana 6.2e-10
GLK2
AT5G44190
protein from Arabidopsis thaliana 2.3e-09
AT3G25790 protein from Arabidopsis thaliana 3.1e-09
AT1G25550 protein from Arabidopsis thaliana 3.7e-09
AT1G68670 protein from Arabidopsis thaliana 1.5e-08
HRS1
HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1
protein from Arabidopsis thaliana 1.8e-08
AT1G49560 protein from Arabidopsis thaliana 7.7e-08
AT4G37180 protein from Arabidopsis thaliana 9.5e-08
ARR11
AT1G67710
protein from Arabidopsis thaliana 1.3e-07
RR12
AT2G25180
protein from Arabidopsis thaliana 4.0e-07
Q7Y0W3
Two-component response regulator EHD1
protein from Oryza sativa Indica Group 6.5e-07
EHD1
Two-component response regulator EHD1
protein from Oryza sativa Japonica Group 6.5e-07
APRR2
AT4G18020
protein from Arabidopsis thaliana 1.5e-06
RR10
AT4G31920
protein from Arabidopsis thaliana 5.7e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014887
        (416 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2095933 - symbol:MYR2 species:3702 "Arabidopsi...  1148  1.6e-116  1
TAIR|locus:2172394 - symbol:MYR1 "myb-related protein 1" ...  1112  1.1e-112  1
TAIR|locus:2026739 - symbol:AT1G69580 species:3702 "Arabi...   528  8.3e-51   1
TAIR|locus:2093726 - symbol:AT3G24120 species:3702 "Arabi...   440  1.7e-41   1
TAIR|locus:2119425 - symbol:UNE16 "unfertilized embryo sa...   436  4.6e-41   1
TAIR|locus:2157146 - symbol:AT5G45580 species:3702 "Arabi...   373  2.2e-34   1
TAIR|locus:2206415 - symbol:APL "ALTERED PHLOEM DEVELOPME...   322  5.6e-29   1
TAIR|locus:2170199 - symbol:AT5G06800 species:3702 "Arabi...   219  1.2e-27   3
TAIR|locus:2038957 - symbol:AT2G20400 "AT2G20400" species...   213  1.0e-26   2
TAIR|locus:2087740 - symbol:AT3G12730 species:3702 "Arabi...   283  7.6e-25   1
TAIR|locus:2045761 - symbol:AT2G01060 species:3702 "Arabi...   248  9.2e-21   1
TAIR|locus:2148720 - symbol:PHL1 "AT5G29000" species:3702...   243  2.8e-18   1
TAIR|locus:2100880 - symbol:AT3G04450 species:3702 "Arabi...   238  1.5e-17   1
TAIR|locus:2139865 - symbol:PHR1 "phosphate starvation re...   222  8.2e-16   1
TAIR|locus:2089260 - symbol:AT3G13040 species:3702 "Arabi...   223  8.5e-16   1
TAIR|locus:2041539 - symbol:AT2G42660 "AT2G42660" species...   194  9.4e-15   1
TAIR|locus:2204518 - symbol:AT1G14600 "AT1G14600" species...   189  3.3e-14   1
TAIR|locus:2042927 - symbol:AT2G38300 "AT2G38300" species...   203  6.1e-14   1
TAIR|locus:2051572 - symbol:AT2G06020 "AT2G06020" species...   199  8.2e-14   1
TAIR|locus:2058445 - symbol:MYBC1 "AT2G40970" species:370...   184  1.2e-13   1
TAIR|locus:2041145 - symbol:AT2G02060 species:3702 "Arabi...   186  2.1e-13   1
TAIR|locus:2148348 - symbol:BOA "AT5G59570" species:3702 ...   186  3.2e-12   1
TAIR|locus:2063141 - symbol:AT2G40260 "AT2G40260" species...   190  3.9e-12   1
TAIR|locus:2125771 - symbol:AT4G04580 "AT4G04580" species...   169  5.1e-12   1
TAIR|locus:2171427 - symbol:KAN "KANADI" species:3702 "Ar...   185  1.4e-11   1
TAIR|locus:2028346 - symbol:KAN2 "AT1G32240" species:3702...   184  1.6e-11   1
TAIR|locus:2103247 - symbol:AT3G10760 "AT3G10760" species...   182  1.7e-11   1
UNIPROTKB|Q0J235 - symbol:RL9 "Probable transcription fac...   182  5.5e-11   1
TAIR|locus:2163852 - symbol:ATS "AT5G42630" species:3702 ...   174  5.8e-11   1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp...   182  8.6e-11   1
TAIR|locus:2175364 - symbol:AT5G05090 "AT5G05090" species...   171  1.0e-10   1
TAIR|locus:505006489 - symbol:KAN3 "AT4G17695" species:37...   172  2.1e-10   1
UNIPROTKB|Q5Z5I4 - symbol:GLK1 "Probable transcription fa...   175  2.4e-10   1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ...   173  2.7e-10   1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp...   177  2.9e-10   1
TAIR|locus:2063746 - symbol:AT2G03500 "AT2G03500" species...   171  6.2e-10   1
TAIR|locus:2167639 - symbol:GLK2 "AT5G44190" species:3702...   165  2.3e-09   1
TAIR|locus:2085984 - symbol:AT3G25790 species:3702 "Arabi...   163  3.1e-09   1
TAIR|locus:2031210 - symbol:AT1G25550 species:3702 "Arabi...   162  3.7e-09   1
TAIR|locus:2026863 - symbol:AT1G68670 species:3702 "Arabi...   157  1.5e-08   1
TAIR|locus:2205339 - symbol:HRS1 "HYPERSENSITIVITY TO LOW...   156  1.8e-08   1
TAIR|locus:2010297 - symbol:AT1G49560 "AT1G49560" species...   150  7.7e-08   1
TAIR|locus:2115070 - symbol:AT4G37180 species:3702 "Arabi...   150  9.5e-08   1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"...   154  1.3e-07   2
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ...   152  4.0e-07   2
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ...   142  6.5e-07   1
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re...   142  6.5e-07   1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops...   142  1.5e-06   1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ...   137  5.7e-06   1


>TAIR|locus:2095933 [details] [associations]
            symbol:MYR2 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
            GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390 InterPro:IPR025756
            InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011698
            ProtClustDB:CLSN2686543 IPI:IPI00524229 RefSeq:NP_001118567.1
            UniGene:At.40915 ProteinModelPortal:Q9SQQ9 SMR:Q9SQQ9
            EnsemblPlants:AT3G04030.3 GeneID:819558 KEGG:ath:AT3G04030
            TAIR:At3g04030 InParanoid:Q9SQQ9 OMA:HITSERH PhylomeDB:Q9SQQ9
            Genevestigator:Q9SQQ9 Uniprot:Q9SQQ9
        Length = 394

 Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
 Identities = 255/426 (59%), Positives = 302/426 (70%)

Query:     1 MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
             MY+ +Q+QGK++ SSSRM I +ERH FL+G S PGDSGL+LSTDAKPRLKWTPDLHERFI
Sbjct:     1 MYYQNQHQGKNILSSSRMHITSERHPFLRGNS-PGDSGLILSTDAKPRLKWTPDLHERFI 59

Query:    61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIAHTGI 120
             EAVNQLGGADKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN   NKI     
Sbjct:    60 EAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANNSFNKI----- 114

Query:   121 GGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 180
                       G +T+  E+ P+A+     NLSIGPQPNK+  I E +QMQIEVQRRLHEQ
Sbjct:   115 ----------GIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQ 164

Query:   181 LEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNS 240
             LEVQRHLQLRIEAQGKYLQ+VLEKAQETLGRQNLG AG+EAAKVQLSELVSKVS +  NS
Sbjct:   165 LEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGAAGIEAAKVQLSELVSKVSAEYPNS 224

Query:   241 TFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQE-IHNGGVRLRPYHGTPTLE 299
             +F + KELQ  C QQ Q N P DCS++SCLTS EG+QK+ + + N  + LR Y G  T E
Sbjct:   225 SFLEPKELQNLCSQQMQTNYPPDCSLESCLTSSEGTQKNSKMLENNRLGLRTYIGDSTSE 284

Query:   300 PKEIVEEPMLQQTELKWRKDLKESKFLSSIGKD---------RGPGELSIGSGSFPAGRF 350
              KEI+EEP+ Q+ EL W + L+ + +LS++  +         R PG LSIG G       
Sbjct:   285 QKEIMEEPLFQRMELTWTEGLRGNPYLSTMVSEAEQRISYSERSPGRLSIGVGLH----- 339

Query:   351 KASNEDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCKQFDL 410
                ++ +H   Q N   E  KLE  N     +    +T+LDLN H  EN   +  KQFDL
Sbjct:   340 --GHKSQH--QQGNN--EDHKLETRNR----KGMDSTTELDLNTHV-ENYCTTRTKQFDL 388

Query:   411 NGFSWN 416
             NGFSWN
Sbjct:   389 NGFSWN 394


>TAIR|locus:2172394 [details] [associations]
            symbol:MYR1 "myb-related protein 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB012246
            HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
            InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
            IPI:IPI00538966 RefSeq:NP_197325.1 RefSeq:NP_974798.1
            UniGene:At.7556 ProteinModelPortal:Q9FK47 SMR:Q9FK47
            EnsemblPlants:AT5G18240.1 EnsemblPlants:AT5G18240.4 GeneID:831942
            KEGG:ath:AT5G18240 TAIR:At5g18240 InParanoid:Q9FK47 OMA:LETHTRT
            PhylomeDB:Q9FK47 ProtClustDB:CLSN2686543 Genevestigator:Q9FK47
            Uniprot:Q9FK47
        Length = 402

 Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
 Identities = 247/430 (57%), Positives = 300/430 (69%)

Query:     1 MYHHHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
             MY+H+Q+QGKS+ SSSRMPI +ERH FL+G +G GDSGL+LSTDAKPRLKWTPDLHERF+
Sbjct:     1 MYYHNQHQGKSILSSSRMPISSERHPFLRG-NGTGDSGLILSTDAKPRLKWTPDLHERFV 59

Query:    61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIAHTGI 120
             EAVNQLGG DKATPKT+MK+MGIPGLTLYHLKSHLQKYRLSKNL+GQAN   NK   T +
Sbjct:    60 EAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNK---TSV 116

Query:   121 GGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 180
                         +T+  E  PE + +H  +LSIGPQP+ +L IS+ +QMQIEVQRRLHEQ
Sbjct:   117 ------------MTMVEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQ 164

Query:   181 LEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNS 240
             LEVQRHLQLRIEAQGKYLQ++LEKAQETLGRQNLG AG+EA K QLSELVSKVS    +S
Sbjct:   165 LEVQRHLQLRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDS 224

Query:   241 TFSDLKELQGFCPQQPQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTLEP 300
             +F + KELQ    QQ Q   P + S+DSCLTS EG+QK  ++ +  + LR Y G  T E 
Sbjct:   225 SFLEPKELQNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQ 284

Query:   301 KEIVEEPMLQQTELKWRKD--LKESK---FLSSIGKD---------RGPGELSIGSGSFP 346
             KEI+EEP   + EL W ++  L+E+    +LS++  +         R PG LSIG G   
Sbjct:   285 KEIMEEPFFHRMELTWAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVG-LH 343

Query:   347 AGRFKASNEDEHFQDQTNKKPEGAKLENENLLPEYRLPCFSTKLDLNAHDHENDVASGCK 406
               R ++SN  E+ +++ N+  E  KLE              T LDLN HD EN   +  K
Sbjct:   344 EHRGRSSNNSEYTEERFNENNEDCKLETHT----------RTALDLNTHD-ENYGTTRPK 392

Query:   407 QFDLNGFSWN 416
             QFDLNGFSWN
Sbjct:   393 QFDLNGFSWN 402


>TAIR|locus:2026739 [details] [associations]
            symbol:AT1G69580 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0009736 "cytokinin mediated signaling pathway"
            evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000239390
            InterPro:IPR025756 InterPro:IPR006447 Pfam:PF14379
            TIGRFAMs:TIGR01557 EMBL:AC021046 IPI:IPI00846148
            RefSeq:NP_001077798.1 UniGene:At.52449 ProteinModelPortal:A8MSE5
            SMR:A8MSE5 PRIDE:A8MSE5 EnsemblPlants:AT1G69580.2 GeneID:843294
            KEGG:ath:AT1G69580 TAIR:At1g69580 eggNOG:NOG249461 OMA:MEINNNA
            PhylomeDB:A8MSE5 ProtClustDB:CLSN2699064 ArrayExpress:A8MSE5
            Genevestigator:A8MSE5 Uniprot:A8MSE5
        Length = 337

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 121/253 (47%), Positives = 164/253 (64%)

Query:    39 LVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKY 98
             LVLSTDAKPRLKWT DLH +FIEAVNQLGG +KATPK +MK+M IPGLTLYHLKSHLQKY
Sbjct:    27 LVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKY 86

Query:    99 RLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPN 158
             RL K++       +NK+  +     +   S      + G  + E N+         P  +
Sbjct:    87 RLGKSM----KFDDNKLEVSSASENQEVESKNDSRDLRGCSVTEENSN--------PAKD 134

Query:   159 KSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAG 218
             + L I+E +QMQ+EVQ++LHEQ+EVQRHLQ++IEAQGKYLQ+VL KAQ+TL   +    G
Sbjct:   135 RGLQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLG 194

Query:   219 LEAAKVQLSELVSKVSTQCLNSTFSDL----KELQGFCPQQPQANQPTD---CSMDSCLT 271
             ++ A+ +LS L S V+  C +++FS+L    +E +GF   +   N+      CS++S LT
Sbjct:   195 MDFARTELSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLT 254

Query:   272 SCEGSQKDQEIHN 284
             S E S+   +  N
Sbjct:   255 SSETSETKLDTDN 267


>TAIR|locus:2093726 [details] [associations]
            symbol:AT3G24120 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0000394 "RNA splicing, via endonucleolytic
            cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
            biosynthetic process" evidence=RCA] [GO:0010048 "vernalization
            response" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
            evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
            InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
            TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00531757
            RefSeq:NP_974356.1 UniGene:At.26588 ProteinModelPortal:F4J5D9
            SMR:F4J5D9 EnsemblPlants:AT3G24120.2 GeneID:821998
            KEGG:ath:AT3G24120 OMA:NLPGDAC PhylomeDB:F4J5D9 Uniprot:F4J5D9
        Length = 298

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 112/255 (43%), Positives = 151/255 (59%)

Query:    28 LQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLT 87
             L G + PGD+ LVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M+ MG+ GLT
Sbjct:    23 LDGTNLPGDACLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLT 82

Query:    88 LYHLKSHLQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATH 147
             LYHLKSHLQK+RL +   G+ +  N+K A   +G    +S   G  +    RM +     
Sbjct:    83 LYHLKSHLQKFRLGRQA-GKESTENSKDASC-VG----ESQDTGSSSTSSMRMAQQEQNE 136

Query:   148 MNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQE 207
                   G Q  ++L     +Q ++  Q    E  +VQR LQLRIEAQGKYLQ++LEKA +
Sbjct:   137 ------GYQVTEALRAQMEVQRRLHDQL---EYGQVQRRLQLRIEAQGKYLQSILEKACK 187

Query:   208 TLGRQNLGTAGLEAAKVQLSELVSKVS--TQCLNSTFSDLKELQGFCPQQPQA------- 258
                 Q    AGLEAA+ +LSEL  KVS  +Q  +  + D  ++    P   +        
Sbjct:   188 AFDEQAATFAGLEAAREELSELAIKVSNSSQGTSVPYFDATKMM-MMPSLSELAVAIDNK 246

Query:   259 -NQPTDCSMDSCLTS 272
              N  T+CS++S LTS
Sbjct:   247 NNITTNCSVESSLTS 261


>TAIR|locus:2119425 [details] [associations]
            symbol:UNE16 "unfertilized embryo sac 16" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0009567 "double fertilization forming a
            zygote and endosperm" evidence=IMP] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687 GO:GO:0003677
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
            Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009567
            IPI:IPI00657591 RefSeq:NP_001031626.1 UniGene:At.22199
            ProteinModelPortal:F4JTR5 SMR:F4JTR5 PRIDE:F4JTR5
            EnsemblPlants:AT4G13640.2 GeneID:826998 KEGG:ath:AT4G13640
            OMA:LPIDACL PhylomeDB:F4JTR5 Uniprot:F4JTR5
        Length = 295

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 112/268 (41%), Positives = 154/268 (57%)

Query:    12 MHSSSRMPIPTERHL--FLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGA 69
             M+S+ R  +P +  L  +  G + P D+ LVL+TD KPRL+WT +LHERF++AV QLGG 
Sbjct:     1 MYSAIRSSLPLDGSLGDYSDGTNLPIDACLVLTTDPKPRLRWTSELHERFVDAVTQLGGP 60

Query:    70 DKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSG 129
             DKATPKT+M+ MG+ GLTLYHLKSHLQK+RL +    + +I N+K            SS 
Sbjct:    61 DKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGRQ-SCKESIDNSKDVSCVAESQDTGSSS 119

Query:   130 VGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQL 189
                + +  +   E N ++        Q  ++L     +Q ++  Q    E  +VQR LQL
Sbjct:   120 TSSLRLAAQ---EQNESY--------QVTEALRAQMEVQRRLHEQL---EYTQVQRRLQL 165

Query:   190 RIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVST----QCLNSTFSDL 245
             RIEAQGKYLQ++LEKA + +  Q +  AGLEAA+ +LSEL  K S     Q   STF   
Sbjct:   166 RIEAQGKYLQSILEKACKAIEEQAVAFAGLEAAREELSELAIKASITNGCQGTTSTFDTT 225

Query:   246 KELQGFCPQQPQA-NQPTDCSMDSCLTS 272
             K +     +   A     +CS +S LTS
Sbjct:   226 KMMIPSLSELAVAIEHKNNCSAESSLTS 253


>TAIR|locus:2157146 [details] [associations]
            symbol:AT5G45580 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
            InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
            TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00931042
            RefSeq:NP_199371.2 UniGene:At.50506 ProteinModelPortal:F4KEK2
            SMR:F4KEK2 PRIDE:F4KEK2 DNASU:834596 EnsemblPlants:AT5G45580.1
            GeneID:834596 KEGG:ath:AT5G45580 OMA:YQIEVQR Uniprot:F4KEK2
        Length = 264

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 84/189 (44%), Positives = 121/189 (64%)

Query:    40 VLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
             +++ D KPRL+WT DLH+RF++AV +LGGADKATPK+V+KLMG+ GLTLYHLKSHLQKYR
Sbjct:     1 MMTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYR 60

Query:   100 LSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPNK 159
             L +    + N       + G   + F +   G ++         N +  +N     + + 
Sbjct:    61 LGQQQGKKQNRTEQNKENAGSSYVHFDNCSQGGIS---------NDSRFDNHQ---RQSG 108

Query:   160 SLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGL 219
             ++  +E ++ Q++ Q+R  EQLEVQ+ LQ+R+EAQGKYL  +LEKAQ++L     G AG 
Sbjct:   109 NVPFAEAMRHQVDAQQRFQEQLEVQKKLQMRMEAQGKYLLTLLEKAQKSLP---CGNAG- 164

Query:   220 EAAKVQLSE 228
             E  K Q S+
Sbjct:   165 ETDKGQFSD 173


>TAIR|locus:2206415 [details] [associations]
            symbol:APL "ALTERED PHLOEM DEVELOPMENT" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0010088 "phloem development"
            evidence=IMP] [GO:0010089 "xylem development" evidence=IMP]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0010089 EMBL:AC007202 EMBL:AY045662 EMBL:AY143841
            EMBL:AK316719 IPI:IPI00538563 IPI:IPI00542908 PIR:D96825
            RefSeq:NP_565209.1 RefSeq:NP_849905.1 UniGene:At.23550 HSSP:O49397
            ProteinModelPortal:Q9SAK5 SMR:Q9SAK5 IntAct:Q9SAK5 STRING:Q9SAK5
            PRIDE:Q9SAK5 EnsemblPlants:AT1G79430.2 GeneID:844281
            KEGG:ath:AT1G79430 TAIR:At1g79430 eggNOG:NOG261203
            HOGENOM:HOG000239390 InParanoid:Q94AW3 OMA:CQTLAGE PhylomeDB:Q9SAK5
            ProtClustDB:CLSN2689327 Genevestigator:Q9SAK5 GO:GO:0010088
            InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
            Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 Uniprot:Q9SAK5
        Length = 358

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 76/189 (40%), Positives = 111/189 (58%)

Query:    35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
             GDSGLVL+TD KPRL+WT +LHERF++AV QLGG DKATPKT+M++MG+ GLTLYHLKSH
Sbjct:    23 GDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSH 82

Query:    95 LQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIG 154
             LQK+RL K  H +   G+    H+   G +  +  +         M   N   M  + + 
Sbjct:    83 LQKFRLGKQPHKE--YGD----HSTKEGSRASAMDIQRNVASSSGMMSRNMNEMQ-MEVQ 135

Query:   155 PQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG-RQN 213
              + ++ L +   +Q++IE Q +  + + ++R  Q      G+ + A    A    G + N
Sbjct:   136 RRLHEQLEVQRHLQLRIEAQGKYMQSI-LERACQT---LAGENMAAATAAAAVGGGYKGN 191

Query:   214 LGTAGLEAA 222
             LG++ L AA
Sbjct:   192 LGSSSLSAA 200


>TAIR|locus:2170199 [details] [associations]
            symbol:AT5G06800 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
            InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AK226644 IPI:IPI00528070
            RefSeq:NP_196298.2 UniGene:At.50439 ProteinModelPortal:Q0WVU3
            SMR:Q0WVU3 PRIDE:Q0WVU3 EnsemblPlants:AT5G06800.1 GeneID:830570
            KEGG:ath:AT5G06800 TAIR:At5g06800 eggNOG:NOG298644
            HOGENOM:HOG000241107 InParanoid:Q0WVU3 OMA:MDNINFE
            ProtClustDB:CLSN2918619 Genevestigator:Q0WVU3 Uniprot:Q0WVU3
        Length = 375

 Score = 219 (82.2 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
 Identities = 37/57 (64%), Positives = 49/57 (85%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
             K R++WT DLHE+F+E VN+LGGADKATPK ++K M   GLT++H+KSHLQKYR++K
Sbjct:   192 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAK 248

 Score = 147 (56.8 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
 Identities = 33/84 (39%), Positives = 52/84 (61%)

Query:   124 KFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEV 183
             K++ +   P +  G+    A A  ++ L         + I E +Q+Q++VQR LHEQLE+
Sbjct:   243 KYRIAKYMPESQEGKFEKRACAKELSQLDT----RTGVQIKEALQLQLDVQRHLHEQLEI 298

Query:   184 QRHLQLRIEAQGKYLQAVLEKAQE 207
             QR+LQLRIE QGK L+ ++E+ Q+
Sbjct:   299 QRNLQLRIEEQGKQLKMMMEQQQK 322

 Score = 37 (18.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query:     2 YHHHQNQGKSMHSSSRMPIPTE 23
             YHH  +   S+  S  M IP +
Sbjct:    81 YHHQSSDSPSLDQSVSM-IPMQ 101


>TAIR|locus:2038957 [details] [associations]
            symbol:AT2G20400 "AT2G20400" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0009555 "pollen development" evidence=IMP] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
            InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
            Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006119
            EMBL:AK118313 IPI:IPI00521384 RefSeq:NP_179630.2 UniGene:At.43867
            ProteinModelPortal:Q8GXC2 SMR:Q8GXC2 PaxDb:Q8GXC2 PRIDE:Q8GXC2
            EnsemblPlants:AT2G20400.1 GeneID:816559 KEGG:ath:AT2G20400
            TAIR:At2g20400 eggNOG:NOG265443 HOGENOM:HOG000064669
            InParanoid:Q8GXC2 OMA:ANSMENR PhylomeDB:Q8GXC2
            ProtClustDB:CLSN2918042 Genevestigator:Q8GXC2 Uniprot:Q8GXC2
        Length = 397

 Score = 213 (80.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
 Identities = 37/58 (63%), Positives = 51/58 (87%)

Query:    45 AKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
             AK R++WTP+LHE F++AVNQLGG+++ATPK V+K M + GLT++H+KSHLQKYR +K
Sbjct:   230 AKGRMRWTPELHEVFVDAVNQLGGSNEATPKGVLKHMKVEGLTIFHVKSHLQKYRTAK 287

 Score = 152 (58.6 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
 Identities = 36/88 (40%), Positives = 53/88 (60%)

Query:   133 VTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIE 192
             + VP E  PEA  T +  ++      + + I+ET+++Q+E Q++LHEQLE  R +QLRIE
Sbjct:   289 IPVPSEGSPEARLTPLEQIT-SDDTKRGIDITETLRIQMEHQKKLHEQLESLRTMQLRIE 347

Query:   193 AQGKYLQAVLEKAQETLGRQNLGTAGLE 220
              QGK L  ++EK       QN+G  G E
Sbjct:   348 EQGKALLMMIEK-------QNMGFGGPE 368


>TAIR|locus:2087740 [details] [associations]
            symbol:AT3G12730 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
            InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
            Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY070764
            EMBL:AY143916 IPI:IPI00519091 RefSeq:NP_187879.2 UniGene:At.28330
            ProteinModelPortal:Q8VYI2 SMR:Q8VYI2 EnsemblPlants:AT3G12730.1
            GeneID:820455 KEGG:ath:AT3G12730 TAIR:At3g12730 eggNOG:NOG317938
            InParanoid:Q8VYI2 OMA:CETQEAS PhylomeDB:Q8VYI2
            ProtClustDB:CLSN2917937 Genevestigator:Q8VYI2 Uniprot:Q8VYI2
        Length = 235

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 67/176 (38%), Positives = 103/176 (58%)

Query:    37 SGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQ 96
             SGLVL+TD KPRL+WT +LHERF++AV  LGG +KATPKT+M++MG+ GLTLYHLKSHLQ
Sbjct:    14 SGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTLYHLKSHLQ 73

Query:    97 KYRLSKNLHGQANIGNNK-IAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGP 155
             K+RL K  H + +  ++  I  T    M          T P              L IG 
Sbjct:    74 KFRLGKQPHKEHSQNHSICIRDTNRASMLDLRRNAVFTTSP--------------LIIGR 119

Query:   156 QPNK-SLHISETIQMQIEVQRRLHEQLEVQ-RHLQLRIEAQGKYLQAVLEKAQETL 209
               N+  + +   I+ ++ ++R++++++  Q ++++  +E   +  +A L K   TL
Sbjct:   120 NMNEMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACETQEASLTKDYSTL 175


>TAIR|locus:2045761 [details] [associations]
            symbol:AT2G01060 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0006499 "N-terminal protein myristoylation"
            evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
            [GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
            [GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
            InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
            Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006837
            EMBL:AF370550 EMBL:AY084725 EMBL:BT000013 IPI:IPI00544604
            PIR:B84420 RefSeq:NP_178216.1 UniGene:At.24449
            ProteinModelPortal:Q9SJW0 SMR:Q9SJW0 EnsemblPlants:AT2G01060.1
            GeneID:814630 KEGG:ath:AT2G01060 TAIR:At2g01060 eggNOG:NOG329415
            InParanoid:Q9SJW0 OMA:TNELHER PhylomeDB:Q9SJW0
            ProtClustDB:CLSN2683513 ArrayExpress:Q9SJW0 Genevestigator:Q9SJW0
            Uniprot:Q9SJW0
        Length = 286

 Score = 248 (92.4 bits), Expect = 9.2e-21, P = 9.2e-21
 Identities = 63/154 (40%), Positives = 95/154 (61%)

Query:    36 DSGLVLSTDA-KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
             D+G   S+ A K RL+WT +LHERF++AV QLGG D+ATPK V+++MG+ GLT+YH+KSH
Sbjct:     4 DNGGPNSSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSH 63

Query:    95 LQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIG 154
             LQKYRL+K L   ++ G  K      G M    SG+   +  G ++ EA    M    + 
Sbjct:    64 LQKYRLAKYLPDSSSEGK-KTDKKESGDML---SGLDGSS--GMQITEALKLQME---VQ 114

Query:   155 PQPNKSLHISETIQMQIEVQRR-LHEQLEVQRHL 187
              + ++ L +   +Q++IE Q + L + +E Q+ L
Sbjct:   115 KRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRL 148

 Score = 167 (63.8 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 32/57 (56%), Positives = 44/57 (77%)

Query:   154 GPQPNKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLG 210
             G   +  + I+E +++Q+EVQ+RLHEQLEVQR LQLRIEAQGKYL+ ++E+ Q   G
Sbjct:    94 GLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSG 150


>TAIR|locus:2148720 [details] [associations]
            symbol:PHL1 "AT5G29000" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
            InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
            EMBL:AC018632 EMBL:BT002344 EMBL:AY085154 IPI:IPI00527102
            IPI:IPI00527253 IPI:IPI00891441 RefSeq:NP_001078629.1
            RefSeq:NP_001119299.1 RefSeq:NP_568512.3 RefSeq:NP_851090.1
            UniGene:At.26183 ProteinModelPortal:Q8GUN5 SMR:Q8GUN5 PRIDE:Q8GUN5
            EnsemblPlants:AT5G29000.2 GeneID:833026 KEGG:ath:AT5G29000
            TAIR:At5g29000 eggNOG:NOG275266 InParanoid:Q8GUN5 OMA:DSSSHNP
            PhylomeDB:Q8GUN5 ProtClustDB:CLSN2680328 Genevestigator:Q8GUN5
            Uniprot:Q8GUN5
        Length = 413

 Score = 243 (90.6 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 70/192 (36%), Positives = 104/192 (54%)

Query:    32 SGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHL 91
             SG   S  V ++  K R++WTP+LHE F+EAVNQLGG+++ATPK V+KL+  PGLT+YH+
Sbjct:   219 SGRNSSSSVATS--KQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHV 276

Query:    92 KSHLQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPV-TVPGERMPEANATHMNN 150
             KSHLQKYR ++     + +       TG    K K + +  + ++  +   E        
Sbjct:   277 KSHLQKYRTARYKPETSEV-------TGEPQEK-KMTSIEDIKSLDMKTSVEITQALRLQ 328

Query:   151 LSIGPQPNKSLHISETIQMQIEVQRR-LHEQLEVQRHLQ----LRIEAQGKYLQ---AVL 202
             + +  + ++ L I  ++Q+QIE Q R L    E Q+ +Q       EA  K      A +
Sbjct:   329 MEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNKSSSSEASPKQCNGSFAEV 388

Query:   203 EKAQETL-GRQN 213
             E   ETL G QN
Sbjct:   389 EVGLETLTGDQN 400

 Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 52/170 (30%), Positives = 90/170 (52%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMK--LMGIPGLTLYHLKSHLQKYRLSKNL 104
             PRL  T +  ++ + + +QL G + ++     K  +   P L    +++ + +   S+  
Sbjct:   199 PRLDITANQQQQMVSSEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEA-VNQLGGSERA 257

Query:   105 HGQA--NIGNNK---IAHTGIGGMKFKSSGVGPVT--VPGERMPEANATHMNNLSIGPQP 157
               +A   + NN    I H      K++++   P T  V GE   E   T + ++      
Sbjct:   258 TPKAVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQ-EKKMTSIEDIK-SLDM 315

Query:   158 NKSLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQE 207
               S+ I++ +++Q+EVQ+RLHEQLE+QR LQL+IE QG+YLQ + EK Q+
Sbjct:   316 KTSVEITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQK 365


>TAIR|locus:2100880 [details] [associations]
            symbol:AT3G04450 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0016556 "mRNA modification" evidence=RCA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
            GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR025756 InterPro:IPR017930
            InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
            IPI:IPI00540345 RefSeq:NP_187095.2 UniGene:At.40835
            ProteinModelPortal:F4J3P7 SMR:F4J3P7 PRIDE:F4J3P7
            EnsemblPlants:AT3G04450.1 GeneID:819601 KEGG:ath:AT3G04450
            OMA:WPDWADQ Uniprot:F4J3P7
        Length = 442

 Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 62/155 (40%), Positives = 90/155 (58%)

Query:    42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR-- 99
             S  +K R++WTP+LHE F+EA+NQLGG+++ATPK V+KL+  PGLT+YH+KSHLQKYR  
Sbjct:   234 SMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKSHLQKYRTA 293

Query:   100 -----LSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIG 154
                  LSK+   +  + N K     I  +  K+S           + EA    M    + 
Sbjct:   294 RYKPELSKDTE-EPLVKNLKTIED-IKSLDLKTS---------IEITEALRLQMK---VQ 339

Query:   155 PQPNKSLHISETIQMQIEVQRR-LHEQLEVQRHLQ 188
              Q ++ L I  ++Q+QIE Q R L   +E Q+ +Q
Sbjct:   340 KQLHEQLEIQRSLQLQIEEQGRYLQMMIEKQQKMQ 374

 Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 27/48 (56%), Positives = 42/48 (87%)

Query:   160 SLHISETIQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQE 207
             S+ I+E +++Q++VQ++LHEQLE+QR LQL+IE QG+YLQ ++EK Q+
Sbjct:   325 SIEITEALRLQMKVQKQLHEQLEIQRSLQLQIEEQGRYLQMMIEKQQK 372


>TAIR|locus:2139865 [details] [associations]
            symbol:PHR1 "phosphate starvation response  1"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0016036 "cellular response to phosphate starvation"
            evidence=IMP] [GO:0055063 "sulfate ion homeostasis" evidence=IMP]
            [GO:0007623 "circadian rhythm" evidence=IEP] [GO:0071486 "cellular
            response to high light intensity" evidence=IMP] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002687
            GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016036 HSSP:O49397
            InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
            Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0071486
            HOGENOM:HOG000064669 EMBL:AY081290 EMBL:BT002187 EMBL:AJ310799
            IPI:IPI00520685 RefSeq:NP_194590.2 UniGene:At.4525
            ProteinModelPortal:Q94CL7 SMR:Q94CL7 PaxDb:Q94CL7 PRIDE:Q94CL7
            EnsemblPlants:AT4G28610.1 GeneID:828979 KEGG:ath:AT4G28610
            TAIR:At4g28610 eggNOG:NOG275307 InParanoid:Q94CL7 OMA:EKQCKSG
            PhylomeDB:Q94CL7 ProtClustDB:CLSN2915055 Genevestigator:Q94CL7
            GO:GO:0055063 Uniprot:Q94CL7
        Length = 409

 Score = 222 (83.2 bits), Expect = 8.2e-16, P = 8.2e-16
 Identities = 55/135 (40%), Positives = 76/135 (56%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
             K R++WTP+LHE F+EAVN LGG+++ATPK V+K+M + GLT+YH+KSHLQKYR ++   
Sbjct:   225 KARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTARYRP 284

Query:   106 GQANIGNNKIAHTG---IGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPNKSLH 162
               +  G+ +   T    I  +  K  G+G       +M      H   L I  Q N  L 
Sbjct:   285 EPSETGSPERKLTPLEHITSLDLKG-GIGITEALRLQMEVQKQLH-EQLEI--QRNLQLR 340

Query:   163 ISET---IQMQIEVQ 174
             I E    +QM  E Q
Sbjct:   341 IEEQGKYLQMMFEKQ 355

 Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 45/135 (33%), Positives = 75/135 (55%)

Query:   124 KFKSSGVGPVTVPGER-MPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQLE 182
             K++++   P   P E   PE   T + +++        + I+E +++Q+EVQ++LHEQLE
Sbjct:   276 KYRTARYRPE--PSETGSPERKLTPLEHIT-SLDLKGGIGITEALRLQMEVQKQLHEQLE 332

Query:   183 VQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTAGLEAAKVQLSELVSKVSTQCLNSTF 242
             +QR+LQLRIE QGKYLQ + EK    L +    T+   AAK +  +  +  S +      
Sbjct:   333 IQRNLQLRIEEQGKYLQMMFEKQNSGLTKGTASTSD-SAAKSEQEDKKTADSKEVPEEET 391

Query:   243 SDLKELQGFCPQQPQ 257
                +EL+   P++P+
Sbjct:   392 RKCEELESPQPKRPK 406


>TAIR|locus:2089260 [details] [associations]
            symbol:AT3G13040 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0015996 "chlorophyll catabolic process"
            evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR025756
            InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY050889 EMBL:AY096674
            IPI:IPI00543771 RefSeq:NP_566442.1 RefSeq:NP_974298.1
            UniGene:At.11993 ProteinModelPortal:Q949U2 SMR:Q949U2 STRING:Q949U2
            PRIDE:Q949U2 EnsemblPlants:AT3G13040.1 EnsemblPlants:AT3G13040.2
            GeneID:820490 KEGG:ath:AT3G13040 OMA:RIEEHAK
            ProtClustDB:CLSN2688327 ArrayExpress:Q949U2 Genevestigator:Q949U2
            Uniprot:Q949U2
        Length = 449

 Score = 223 (83.6 bits), Expect = 8.5e-16, P = 8.5e-16
 Identities = 58/178 (32%), Positives = 95/178 (53%)

Query:    42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
             + + K R++WTP+LHE F++AV +L G +KATPK V KLM + GLT+YH+KSHLQKYRL+
Sbjct:   237 AANQKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSHLQKYRLA 296

Query:   102 KNL---HGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQPN 158
             K +     +    N++     +   +      G +     ++ EA    M    +  Q +
Sbjct:   297 KYMPEKKEEKRTDNSEEKKLALSKSEADEKKKGAI-----QLTEALRMQME---VQKQLH 348

Query:   159 KSLHISETIQMQIEVQRR-LHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETL-GRQNL 214
             + L +   +Q++IE   + L + LE QR     I +     Q VL  + +++   QN+
Sbjct:   349 EQLEVQRVLQLRIEEHAKYLEKMLEEQRKTGRWISSSS---QTVLSPSDDSIPDSQNM 403


>TAIR|locus:2041539 [details] [associations]
            symbol:AT2G42660 "AT2G42660" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006931 HSSP:O49397
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 EMBL:AC007087 EMBL:AY074640 EMBL:AY078938
            IPI:IPI00542274 PIR:F84856 RefSeq:NP_181794.1 UniGene:At.37023
            ProteinModelPortal:Q9SJJ0 SMR:Q9SJJ0 PaxDb:Q9SJJ0 PRIDE:Q9SJJ0
            EnsemblPlants:AT2G42660.1 GeneID:818866 KEGG:ath:AT2G42660
            TAIR:At2g42660 eggNOG:NOG258430 HOGENOM:HOG000153491 OMA:NREETVE
            PhylomeDB:Q9SJJ0 ProtClustDB:CLSN2913320 ArrayExpress:Q9SJJ0
            Genevestigator:Q9SJJ0 Uniprot:Q9SJJ0
        Length = 255

 Score = 194 (73.4 bits), Expect = 9.4e-15, P = 9.4e-15
 Identities = 36/65 (55%), Positives = 48/65 (73%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHG 106
             PRL+WTPDLH  F+ AV +LGG D+ATPK V+++M + GL++ H+KSHLQ YR SK L  
Sbjct:    51 PRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYR-SKKLEP 109

Query:   107 QANIG 111
              +  G
Sbjct:   110 SSRPG 114


>TAIR|locus:2204518 [details] [associations]
            symbol:AT1G14600 "AT1G14600" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:AC010657 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AJ630486 EMBL:AY568658
            IPI:IPI00523105 RefSeq:NP_172912.3 UniGene:At.41962
            ProteinModelPortal:Q700D9 SMR:Q700D9 EnsemblPlants:AT1G14600.1
            GeneID:838022 KEGG:ath:AT1G14600 TAIR:At1g14600 eggNOG:NOG329381
            HOGENOM:HOG000239342 InParanoid:Q700D9 OMA:NIMNMER
            Genevestigator:Q700D9 Uniprot:Q700D9
        Length = 255

 Score = 189 (71.6 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 34/56 (60%), Positives = 44/56 (78%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
             PRL+WTP+LH  F+ AV+ LGG  KATPK V+K+M + GLT+ H+KSHLQ YR S+
Sbjct:    24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSR 79


>TAIR|locus:2042927 [details] [associations]
            symbol:AT2G38300 "AT2G38300" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT004973
            EMBL:AK117689 IPI:IPI00540370 RefSeq:NP_181364.2 UniGene:At.46670
            ProteinModelPortal:Q8GYE4 SMR:Q8GYE4 IntAct:Q8GYE4 STRING:Q8GYE4
            PRIDE:Q8GYE4 EnsemblPlants:AT2G38300.1 GeneID:818410
            KEGG:ath:AT2G38300 TAIR:At2g38300 eggNOG:NOG310127
            HOGENOM:HOG000090767 InParanoid:Q8GYE4 OMA:KDEEDRT PhylomeDB:Q8GYE4
            ProtClustDB:CLSN2918908 Genevestigator:Q8GYE4 Uniprot:Q8GYE4
        Length = 340

 Score = 203 (76.5 bits), Expect = 6.1e-14, P = 6.1e-14
 Identities = 41/83 (49%), Positives = 55/83 (66%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK-NLH 105
             PRL+WTPDLH RF+ AV +LGG ++ATPK V ++M I GL++ H+KSHLQ YR  K +  
Sbjct:    55 PRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRSKKIDDQ 114

Query:   106 GQANIGNNKIAHTGIGGMKFKSS 128
             GQA  G+  +  T      +K S
Sbjct:   115 GQAIAGHKHLFETSTDRNIYKLS 137


>TAIR|locus:2051572 [details] [associations]
            symbol:AT2G06020 "AT2G06020" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR006447
            TIGRFAMs:TIGR01557 EMBL:AC006413 IPI:IPI00525998 PIR:C84474
            RefSeq:NP_178659.1 UniGene:At.52657 ProteinModelPortal:Q9ZPZ8
            SMR:Q9ZPZ8 EnsemblPlants:AT2G06020.1 GeneID:815156
            KEGG:ath:AT2G06020 TAIR:At2g06020 eggNOG:NOG275517
            HOGENOM:HOG000154034 OMA:SKITPCI PhylomeDB:Q9ZPZ8
            ProtClustDB:CLSN2912993 ArrayExpress:Q9ZPZ8 Genevestigator:Q9ZPZ8
            Uniprot:Q9ZPZ8
        Length = 301

 Score = 199 (75.1 bits), Expect = 8.2e-14, P = 8.2e-14
 Identities = 36/69 (52%), Positives = 52/69 (75%)

Query:    42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
             ++D K RL+W+ DLH+ F+ AV +LGG +KATPK+V + M + G+ L+H+KSHLQK+RL 
Sbjct:    82 TSDEKARLRWSSDLHDCFVNAVEKLGGPNKATPKSVKEAMEVEGIALHHVKSHLQKFRLG 141

Query:   102 K-NLHGQAN 109
             K N+ G  N
Sbjct:   142 KCNIRGGTN 150


>TAIR|locus:2058445 [details] [associations]
            symbol:MYBC1 "AT2G40970" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0009409 "response to cold" evidence=IMP] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004261
            HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002409 EMBL:AY072381
            EMBL:BT000098 IPI:IPI00539516 PIR:T00761 RefSeq:NP_181630.1
            UniGene:At.27776 ProteinModelPortal:O22210 SMR:O22210
            EnsemblPlants:AT2G40970.1 GeneID:818697 KEGG:ath:AT2G40970
            TAIR:At2g40970 eggNOG:NOG255246 HOGENOM:HOG000238691
            InParanoid:O22210 OMA:RYEDSEY PhylomeDB:O22210
            ProtClustDB:CLSN2913178 ArrayExpress:O22210 Genevestigator:O22210
            Uniprot:O22210
        Length = 248

 Score = 184 (69.8 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 58/167 (34%), Positives = 77/167 (46%)

Query:     4 HHQNQGKSMHSSSRMPIPTERHLFLQGGSGPGDS---------GLVLSTDAKPRLKWTPD 54
             +HQ    S  ++   P PT   + +    G GDS         G    T  +PRL WTP 
Sbjct:    56 YHQKLQSS--TTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQ 113

Query:    55 LHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNLHG-QAN--I 110
             LH+RF++AV  LG    A PKT+M+LM + GLT  ++ SHLQKYRL  + + G   N   
Sbjct:   114 LHKRFVDAVGHLG-IKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNGNGIT 172

Query:   111 GNNKIAHTGIGGMKFKSSGV-GPVTVPGERMPEANATHMNNLSIGPQ 156
             G + I         F SS V      P   MP    ++M    I  Q
Sbjct:   173 GGHVIVSDSATDRLFASSPVPAHFLSPDYLMPPLEHSYMGKHVITQQ 219


>TAIR|locus:2041145 [details] [associations]
            symbol:AT2G02060 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 HOGENOM:HOG000239342 EMBL:BT008556 EMBL:BT008699
            EMBL:AK229511 IPI:IPI00542007 RefSeq:NP_565281.2 UniGene:At.41520
            ProteinModelPortal:Q7X887 SMR:Q7X887 EnsemblPlants:AT2G02060.1
            GeneID:814737 KEGG:ath:AT2G02060 TAIR:At2g02060 eggNOG:NOG268656
            InParanoid:Q7X887 OMA:WREQEHE ProtClustDB:CLSN2681500
            Genevestigator:Q7X887 Uniprot:Q7X887
        Length = 256

 Score = 186 (70.5 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 33/53 (62%), Positives = 41/53 (77%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYR 99
             PRL+WTPDLH  F+ AV  LGG  +ATPK V+K+M + GLT+ H+KSHLQ YR
Sbjct:    30 PRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMYR 82


>TAIR|locus:2148348 [details] [associations]
            symbol:BOA "AT5G59570" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0009909 "regulation of flower development" evidence=IMP]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
            EMBL:CP002688 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB025604
            GO:GO:0009909 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT026065 EMBL:AK117348
            EMBL:AB206577 IPI:IPI00538187 RefSeq:NP_200765.1 UniGene:At.29219
            ProteinModelPortal:Q9LTH4 SMR:Q9LTH4 STRING:Q9LTH4
            EnsemblPlants:AT5G59570.1 GeneID:836076 KEGG:ath:AT5G59570
            TAIR:At5g59570 InParanoid:Q9LTH4 OMA:ERSRTIH PhylomeDB:Q9LTH4
            ProtClustDB:CLSN2685121 Genevestigator:Q9LTH4 Uniprot:Q9LTH4
        Length = 298

 Score = 186 (70.5 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 41/80 (51%), Positives = 52/80 (65%)

Query:    29 QGGSGPGD-SGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLT 87
             +G SGP D SG    T  +PRL WTP LH+RF++ V  LG    A PKT+M+LM + GLT
Sbjct:   126 EGDSGPEDASG---KTSKRPRLVWTPQLHKRFVDVVAHLG-IKNAVPKTIMQLMNVEGLT 181

Query:    88 LYHLKSHLQKYRLS-KNLHG 106
               ++ SHLQKYRL  K + G
Sbjct:   182 RENVASHLQKYRLYLKRIQG 201


>TAIR|locus:2063141 [details] [associations]
            symbol:AT2G40260 "AT2G40260" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC007020
            HOGENOM:HOG000090767 IPI:IPI00530168 PIR:C84827 RefSeq:NP_181555.1
            UniGene:At.53083 ProteinModelPortal:Q9SIZ5 SMR:Q9SIZ5 PRIDE:Q9SIZ5
            EnsemblPlants:AT2G40260.1 GeneID:818618 KEGG:ath:AT2G40260
            TAIR:At2g40260 eggNOG:NOG267620 InParanoid:Q9SIZ5 OMA:FRINSHE
            PhylomeDB:Q9SIZ5 ProtClustDB:CLSN2913060 ArrayExpress:Q9SIZ5
            Genevestigator:Q9SIZ5 Uniprot:Q9SIZ5
        Length = 410

 Score = 190 (71.9 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/98 (39%), Positives = 61/98 (62%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHG 106
             PRL+WTP+LH  F++AV +LGG D+ATPK V++LM + GL++ H+KSHLQ YR  K    
Sbjct:    83 PRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKT--D 140

Query:   107 QANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEAN 144
             + N G+   +     G  +  S + P+    ++ P ++
Sbjct:   141 EPNEGDQGFSFEHGAGYTYNLSQL-PMLQSFDQRPSSS 177


>TAIR|locus:2125771 [details] [associations]
            symbol:AT4G04580 "AT4G04580" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            EMBL:AL161501 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 EMBL:AF074021 IPI:IPI00541303 PIR:G85057
            RefSeq:NP_192367.1 UniGene:At.54143 ProteinModelPortal:Q9XEB2
            SMR:Q9XEB2 EnsemblPlants:AT4G04580.1 GeneID:825790
            KEGG:ath:AT4G04580 TAIR:At4g04580 eggNOG:NOG300503
            HOGENOM:HOG000153846 InParanoid:Q9XEB2 OMA:RDLTISH PhylomeDB:Q9XEB2
            ProtClustDB:CLSN2915807 ArrayExpress:Q9XEB2 Genevestigator:Q9XEB2
            Uniprot:Q9XEB2
        Length = 166

 Score = 169 (64.5 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 30/56 (53%), Positives = 40/56 (71%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK 102
             PR+ WT DL  RFI+ + +LGG + ATPK ++ LMG+  LT+ H+KSHLQ YR  K
Sbjct:    15 PRMHWTDDLDIRFIQVIEKLGGEESATPKRILSLMGVRDLTISHVKSHLQMYRNKK 70


>TAIR|locus:2171427 [details] [associations]
            symbol:KAN "KANADI" species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=IMP]
            [GO:0009956 "radial pattern formation" evidence=IMP] [GO:0010051
            "xylem and phloem pattern formation" evidence=IMP] [GO:0010158
            "abaxial cell fate specification" evidence=IMP] [GO:0048440 "carpel
            development" evidence=IGI] [GO:0048481 "ovule development"
            evidence=IGI] [GO:0009944 "polarity specification of
            adaxial/abaxial axis" evidence=IGI] [GO:0009943 "adaxial/abaxial
            axis specification" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            EMBL:AB005242 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 PROSITE:PS51293
            GO:GO:0010051 GO:GO:0048481 HSSP:O49397 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0009944
            GO:GO:0009956 EMBL:AY030192 EMBL:AY037864 EMBL:AY048688
            EMBL:BT026436 IPI:IPI00535955 RefSeq:NP_568334.1 UniGene:At.6466
            UniGene:At.66763 ProteinModelPortal:Q93WJ9 SMR:Q93WJ9 IntAct:Q93WJ9
            STRING:Q93WJ9 PRIDE:Q93WJ9 EnsemblPlants:AT5G16560.1 GeneID:831518
            KEGG:ath:AT5G16560 TAIR:At5g16560 eggNOG:NOG330873
            HOGENOM:HOG000241649 InParanoid:Q93WJ9 OMA:GINGNEV PhylomeDB:Q93WJ9
            ProtClustDB:CLSN2917650 Genevestigator:Q93WJ9 Uniprot:Q93WJ9
        Length = 403

 Score = 185 (70.2 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 48/124 (38%), Positives = 64/124 (51%)

Query:     2 YHHHQNQ-GKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFI 60
             +HHH NQ G    S S  P     H      S          +   PR++WT  LH RF+
Sbjct:   174 HHHHHNQYGVVGSSDSSSPHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFV 233

Query:    61 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSK--NLHGQANIGNNKIAHT 118
              AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K  N    ++ G+ +    
Sbjct:   234 HAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKPAASSDGSGE-EEM 292

Query:   119 GIGG 122
             GI G
Sbjct:   293 GING 296


>TAIR|locus:2028346 [details] [associations]
            symbol:KAN2 "AT1G32240" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0048440 "carpel development" evidence=IGI] [GO:0048481 "ovule
            development" evidence=IGI] [GO:0009944 "polarity specification of
            adaxial/abaxial axis" evidence=IGI] [GO:0009737 "response to
            abscisic acid stimulus" evidence=RCA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0010162 "seed dormancy
            process" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
            GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
            GO:GO:0048481 EMBL:AC084110 HSSP:O49397 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009944
            HOGENOM:HOG000241649 EMBL:AY048689 EMBL:BT029211 EMBL:AB493491
            IPI:IPI00539948 RefSeq:NP_564392.1 UniGene:At.25340
            ProteinModelPortal:Q9C616 SMR:Q9C616 STRING:Q9C616
            EnsemblPlants:AT1G32240.1 GeneID:840116 KEGG:ath:AT1G32240
            TAIR:At1g32240 eggNOG:NOG325874 InParanoid:Q9C616 OMA:SDVYENG
            PhylomeDB:Q9C616 ProtClustDB:CLSN2715231 Genevestigator:Q9C616
            Uniprot:Q9C616
        Length = 388

 Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 36/77 (46%), Positives = 49/77 (63%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH- 105
             PR++WT  LH RF+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K    
Sbjct:   214 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDK 273

Query:   106 GQANIGNNKIAHTGIGG 122
               A+ G + +   G  G
Sbjct:   274 AAASSGQSDVYENGSSG 290


>TAIR|locus:2103247 [details] [associations]
            symbol:AT3G10760 "AT3G10760" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            EMBL:AC011708 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 HOGENOM:HOG000238691 ProtClustDB:CLSN2716677
            IPI:IPI00530545 RefSeq:NP_187687.1 UniGene:At.39869
            ProteinModelPortal:Q9SG82 SMR:Q9SG82 PRIDE:Q9SG82
            EnsemblPlants:AT3G10760.1 GeneID:820245 KEGG:ath:AT3G10760
            TAIR:At3g10760 eggNOG:NOG312708 InParanoid:Q9SG82 OMA:FARWEEE
            PhylomeDB:Q9SG82 Genevestigator:Q9SG82 Uniprot:Q9SG82
        Length = 335

 Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 44/118 (37%), Positives = 65/118 (55%)

Query:     3 HHHQNQGKSMHSSSRMPIPTERHL----FLQGGSGPGDSGLVLSTDAK----PRLKWTPD 54
             HHH +   +  + S++ +P+ +      F    +  G  G      A+    PRL WTP 
Sbjct:    54 HHHHHHQTTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQ 113

Query:    55 LHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNLHGQANIG 111
             LH+RF++AV  LG    A PKT+M+LM + GLT  ++ SHLQKYRL  K + G ++ G
Sbjct:   114 LHKRFVDAVAHLG-IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGG 170


>UNIPROTKB|Q0J235 [details] [associations]
            symbol:RL9 "Probable transcription factor RL9"
            species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0010158 "abaxial cell fate specification"
            evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AP008215 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0010229
            eggNOG:NOG330873 HOGENOM:HOG000241649 EMBL:AP005904 EMBL:FJ268747
            EMBL:FJ268748 RefSeq:NP_001063097.1 UniGene:Os.5597 PRIDE:Q0J235
            GeneID:4346973 KEGG:osa:4346973 Gramene:Q0J235 OMA:DALPWRH
            ProtClustDB:CLSN2697690 Uniprot:Q0J235
        Length = 532

 Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
 Identities = 38/83 (45%), Positives = 52/83 (62%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHG 106
             PR++WT  LH RF+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K+   
Sbjct:   325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDK 384

Query:   107 QANIGNNKIAHTGIGGMKFKSSG 129
              A   ++  A  G G  +F   G
Sbjct:   385 PA--ASSGPADGGSGDEEFAGGG 405


>TAIR|locus:2163852 [details] [associations]
            symbol:ATS "AT5G42630" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IMP;TAS]
            [GO:0048481 "ovule development" evidence=IMP] [GO:0080060
            "integument development" evidence=IGI;IMP] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0005618 GO:GO:0030154 GO:GO:0003700 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212
            PROSITE:PS51293 HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 GO:GO:0080060 HOGENOM:HOG000241649 EMBL:AB013391
            EMBL:AY048691 EMBL:BT026053 IPI:IPI00541325 IPI:IPI00892123
            RefSeq:NP_001119363.1 RefSeq:NP_199077.1 UniGene:At.26412
            ProteinModelPortal:Q9FJV5 SMR:Q9FJV5 STRING:Q9FJV5
            EnsemblPlants:AT5G42630.1 GeneID:834270 KEGG:ath:AT5G42630
            TAIR:At5g42630 eggNOG:NOG280455 InParanoid:Q9FJV5 OMA:PQIYGRD
            PhylomeDB:Q9FJV5 ProtClustDB:CLSN2916355 Genevestigator:Q9FJV5
            Uniprot:Q9FJV5
        Length = 276

 Score = 174 (66.3 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 35/65 (53%), Positives = 45/65 (69%)

Query:    38 GLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQK 97
             GL  S  A PR++WT  LH  F+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ 
Sbjct:    98 GLKRSIRA-PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQM 156

Query:    98 YRLSK 102
             YR  K
Sbjct:   157 YRTVK 161


>TAIR|locus:2093668 [details] [associations]
            symbol:RR1 "response regulator 1" species:3702
            "Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
            activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
            transduction system" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS;IDA]
            [GO:0009736 "cytokinin mediated signaling pathway"
            evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
            evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0010380 "regulation of chlorophyll biosynthetic process"
            evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
            process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
            evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
            [GO:0006487 "protein N-linked glycosylation" evidence=RCA]
            [GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
            "regulation of seed germination" evidence=RCA] [GO:0010043
            "response to zinc ion" evidence=RCA] [GO:0016558 "protein import
            into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
            shoot system development" evidence=RCA] InterPro:IPR001005
            InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
            PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
            SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
            GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
            EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
            IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
            RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
            ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
            PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
            KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
            HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
            ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
            Uniprot:Q940D0
        Length = 690

 Score = 182 (69.1 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 46/112 (41%), Positives = 66/112 (58%)

Query:     7 NQGKSMHSSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQL 66
             N+G +  SSSR     E     QG     D+    S   KPR+ W+ +LH++F+ AVNQL
Sbjct:   204 NEGNNWRSSSRKRKDEEGEE--QGDDKDEDA----SNLKKPRVVWSVELHQQFVAAVNQL 257

Query:    67 GGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNLHG----QANIGNN 113
             G  +KA PK +++LM +PGLT  ++ SHLQKYR+  + L G    Q N+ N+
Sbjct:   258 G-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNS 308


>TAIR|locus:2175364 [details] [associations]
            symbol:AT5G05090 "AT5G05090" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002688
            GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 EMBL:AB005245 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY093188
            EMBL:BT006289 IPI:IPI00523871 RefSeq:NP_196128.1 UniGene:At.33034
            ProteinModelPortal:Q9FF65 SMR:Q9FF65 PRIDE:Q9FF65
            EnsemblPlants:AT5G05090.1 GeneID:830391 KEGG:ath:AT5G05090
            TAIR:At5g05090 InParanoid:Q9FF65 OMA:MREEDSN PhylomeDB:Q9FF65
            ProtClustDB:CLSN2716677 ArrayExpress:Q9FF65 Genevestigator:Q9FF65
            Uniprot:Q9FF65
        Length = 266

 Score = 171 (65.3 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query:     5 HQNQGKSMHSSSRMPIPTERHLFLQ-GGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAV 63
             H+N   +         P + +   +  G   GD      T  +PRL WTP LH+RF++AV
Sbjct:    41 HRNNNSNSGQPLPQTTPPQPNSSAEIAGDSTGDEPA--RTLKRPRLVWTPQLHKRFVDAV 98

Query:    64 NQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
               LG    A PKT+M+LM + GLT  ++ SHLQKYRL
Sbjct:    99 AHLG-IKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 134


>TAIR|locus:505006489 [details] [associations]
            symbol:KAN3 "AT4G17695" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0007275
            GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
            HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
            EMBL:Z97344 HOGENOM:HOG000241649 EMBL:AY048690 IPI:IPI00544036
            RefSeq:NP_567535.1 UniGene:At.26411 ProteinModelPortal:Q941I2
            SMR:Q941I2 PaxDb:Q941I2 PRIDE:Q941I2 EnsemblPlants:AT4G17695.1
            GeneID:827490 KEGG:ath:AT4G17695 TAIR:At4g17695 eggNOG:NOG253351
            InParanoid:Q941I2 OMA:SSNENEW PhylomeDB:Q941I2
            ProtClustDB:CLSN2917571 Genevestigator:Q941I2 Uniprot:Q941I2
        Length = 322

 Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 31/57 (54%), Positives = 42/57 (73%)

Query:    47 PRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN 103
             PR++WT  LH  F+ AV  LGG ++ATPK+V++LM +  LTL H+KSHLQ YR  K+
Sbjct:   165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKS 221


>UNIPROTKB|Q5Z5I4 [details] [associations]
            symbol:GLK1 "Probable transcription factor GLK1"
            species:39947 "Oryza sativa Japonica Group" [GO:0010638 "positive
            regulation of organelle organization" evidence=IGI] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IGI]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
            GO:GO:0045893 GO:GO:0003677 EMBL:AP008212 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 EMBL:AP005688 EMBL:AK061946 EMBL:AK065184
            EMBL:AK098909 EMBL:AK122161 RefSeq:NP_001057583.2 UniGene:Os.3340
            ProteinModelPortal:Q5Z5I4 STRING:Q5Z5I4
            EnsemblPlants:LOC_Os06g24070.1 GeneID:4340977 KEGG:osa:4340977
            Gramene:Q5Z5I4 eggNOG:NOG283574 HOGENOM:HOG000237698 OMA:IDSLTRH
            ProtClustDB:CLSN2696175 GO:GO:0010638 Uniprot:Q5Z5I4
        Length = 455

 Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 41/112 (36%), Positives = 62/112 (55%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
             K ++ WTP+LH RF++AV QLG  DKA P  ++++MGI  LT +++ SHLQKYR     H
Sbjct:   180 KAKVDWTPELHRRFVQAVEQLG-IDKAVPSRILEIMGIDSLTRHNIASHLQKYRS----H 234

Query:   106 GQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATHMNNLSIGPQP 157
              +  I     A +     +  ++G G V     + PE+NA  +  +   P P
Sbjct:   235 RKHMIAREAEAASWTQRRQIYAAGGGAVA----KRPESNAWTVPTIGFPPPP 282


>TAIR|locus:2065398 [details] [associations]
            symbol:RR14 "response regulator 14" species:3702
            "Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
            activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
            transduction system" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0009736
            "cytokinin mediated signaling pathway" evidence=RCA;TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
            protein binding" evidence=IPI] [GO:0010029 "regulation of seed
            germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
            metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
            system development" evidence=RCA] InterPro:IPR001005
            InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
            PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
            GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
            eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
            EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
            PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
            ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
            EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
            GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
            OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
            Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
        Length = 382

 Score = 173 (66.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 46/144 (31%), Positives = 78/144 (54%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNL 104
             K R+ W+ +LH++F+ AVN+LG  DKA PK +++LM +PGL+  ++ SHLQK+RL  K L
Sbjct:   200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRL 258

Query:   105 HGQANIGNNKIAHTGIGGMK-FKSSG-VGPVTVPGERMPEANATHMNNLSIGPQPNKSLH 162
              G+A+  N+  +      ++   SSG + P T+        +  H  +  +   PN +L 
Sbjct:   259 SGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPIDNHHSASFGVWI-PNDNLG 317

Query:   163 ISETIQMQIEVQRRLHEQLEVQRH 186
              S+     ++V    +  + V  H
Sbjct:   318 RSQNEHFSVDVSSASNRPVSVAVH 341


>TAIR|locus:2130095 [details] [associations]
            symbol:RR2 "response regulator 2" species:3702
            "Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
            activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
            transduction system" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
            to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
            cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
            evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
            evidence=IMP] [GO:0010119 "regulation of stomatal movement"
            evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
            [GO:0010029 "regulation of seed germination" evidence=RCA]
            [GO:0031537 "regulation of anthocyanin metabolic process"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
            InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
            SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
            SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
            eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
            ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
            EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
            EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
            PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
            ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
            PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
            KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
            OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
            GermOnline:AT4G16110 Uniprot:Q9ZWJ9
        Length = 664

 Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 38/100 (38%), Positives = 60/100 (60%)

Query:    35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
             GD     S+  KPR+ W+ +LH++F+ AVNQLG  DKA PK ++++M +PGLT  ++ SH
Sbjct:   205 GDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASH 263

Query:    95 LQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVT 134
             LQKYR+     G  +     + H+ + G   +    GP++
Sbjct:   264 LQKYRIYLRRLGGVSQHQGNMNHSFMTG---QDQSFGPLS 300


>TAIR|locus:2063746 [details] [associations]
            symbol:AT2G03500 "AT2G03500" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006284
            HOGENOM:HOG000237574 EMBL:AY060559 EMBL:AY133630 EMBL:AK221662
            IPI:IPI00544167 PIR:B84449 RefSeq:NP_027544.1 UniGene:At.27373
            ProteinModelPortal:Q9ZQ85 SMR:Q9ZQ85 IntAct:Q9ZQ85
            EnsemblPlants:AT2G03500.1 GeneID:814878 KEGG:ath:AT2G03500
            TAIR:At2g03500 eggNOG:NOG301728 InParanoid:Q9ZQ85 OMA:QSYSMLL
            PhylomeDB:Q9ZQ85 ProtClustDB:CLSN2687945 ArrayExpress:Q9ZQ85
            Genevestigator:Q9ZQ85 Uniprot:Q9ZQ85
        Length = 432

 Score = 171 (65.3 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 33/66 (50%), Positives = 44/66 (66%)

Query:    35 GDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH 94
             G S     ++ K R  W+PDLH RF++A+  LGG+  ATPK + +LM + GLT   +KSH
Sbjct:   222 GVSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSH 281

Query:    95 LQKYRL 100
             LQKYRL
Sbjct:   282 LQKYRL 287


>TAIR|locus:2167639 [details] [associations]
            symbol:GLK2 "AT5G44190" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=RCA;IMP;IDA] [GO:0009658 "chloroplast organization"
            evidence=IMP] [GO:0009910 "negative regulation of flower
            development" evidence=IGI] [GO:0010380 "regulation of chlorophyll
            biosynthetic process" evidence=IGI] [GO:0006364 "rRNA processing"
            evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
            [GO:0009651 "response to salt stress" evidence=RCA] [GO:0009657
            "plastid organization" evidence=RCA] [GO:0009737 "response to
            abscisic acid stimulus" evidence=RCA] [GO:0009902 "chloroplast
            relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
            evidence=RCA] [GO:0010027 "thylakoid membrane organization"
            evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
            [GO:0030154 "cell differentiation" evidence=RCA] [GO:0035304
            "regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
            "transcription from plastid promoter" evidence=RCA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 EMBL:AB005239
            GO:GO:0009658 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
            PROSITE:PS51293 GO:GO:0009910 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
            HOGENOM:HOG000237698 EMBL:AB062490 EMBL:AY026773 EMBL:AY028368
            EMBL:AY050386 EMBL:AY124819 IPI:IPI00535889 RefSeq:NP_199232.1
            UniGene:At.19638 ProteinModelPortal:Q9FFH0 SMR:Q9FFH0 STRING:Q9FFH0
            EnsemblPlants:AT5G44190.1 GeneID:834442 KEGG:ath:AT5G44190
            TAIR:At5g44190 eggNOG:NOG271712 InParanoid:Q9FFH0 OMA:QEMEGNT
            PhylomeDB:Q9FFH0 ProtClustDB:CLSN2916711 Genevestigator:Q9FFH0
            Uniprot:Q9FFH0
        Length = 386

 Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 36/99 (36%), Positives = 54/99 (54%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKN-- 103
             KP++ WTP+LH +F++AV QLG  DKA P  ++++M +  LT +++ SHLQKYR  +   
Sbjct:   147 KPKVDWTPELHRKFVQAVEQLG-VDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205

Query:   104 LHGQANIGN-NKIAHTGIGGMKFKSSGVGPVTVPGERMP 141
             L  +A   + N   H  +        G  P T P    P
Sbjct:   206 LAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYP 244


>TAIR|locus:2085984 [details] [associations]
            symbol:AT3G25790 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
            EMBL:AB028607 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
            HOGENOM:HOG000237574 ProtClustDB:CLSN2687791 IPI:IPI00546166
            RefSeq:NP_566778.1 UniGene:At.37325 ProteinModelPortal:Q9LS00
            SMR:Q9LS00 EnsemblPlants:AT3G25790.1 GeneID:822170
            KEGG:ath:AT3G25790 TAIR:At3g25790 InParanoid:Q9LS00 OMA:AYKREIS
            PhylomeDB:Q9LS00 Genevestigator:Q9LS00 Uniprot:Q9LS00
        Length = 357

 Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 47/118 (39%), Positives = 59/118 (50%)

Query:    30 GGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLY 89
             GGSG G  G       K R  W+ +LH RF+ A+ QLGG   ATPK +  +M + GLT  
Sbjct:   183 GGSG-GGGGR--RGQRKNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTND 239

Query:    90 HLKSHLQKYRLSKNLHGQANIGNNKIAHTGIGGMKFKSSGVGPVTVPGERMPEANATH 147
              +KSHLQKYRL      Q    NN+ + T      F    VG + VP      ANA +
Sbjct:   240 EVKSHLQKYRLHARRPSQTT-PNNRNSQT----QHFVV--VGGIWVPQTNHSTANAVN 290


>TAIR|locus:2031210 [details] [associations]
            symbol:AT1G25550 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
            "nitrate transport" evidence=RCA] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684 GO:GO:0003677
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237574
            ProtClustDB:CLSN2687960 EMBL:AF326890 EMBL:AF339707 EMBL:AF372906
            EMBL:BT002674 IPI:IPI00533337 RefSeq:NP_564236.1 UniGene:At.25159
            ProteinModelPortal:Q9FPE8 SMR:Q9FPE8 IntAct:Q9FPE8 STRING:Q9FPE8
            PRIDE:Q9FPE8 EnsemblPlants:AT1G25550.1 GeneID:839142
            KEGG:ath:AT1G25550 TAIR:At1g25550 InParanoid:Q9FPE8 OMA:ECSERTT
            PhylomeDB:Q9FPE8 ArrayExpress:Q9FPE8 Genevestigator:Q9FPE8
            Uniprot:Q9FPE8
        Length = 344

 Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 31/58 (53%), Positives = 41/58 (70%)

Query:    43 TDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
             ++ K R  W+P+LH RF+ A+ QLGG+  ATPK +  LM + GLT   +KSHLQKYRL
Sbjct:   206 SNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRL 263


>TAIR|locus:2026863 [details] [associations]
            symbol:AT1G68670 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
            GO:GO:0009737 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY063886
            EMBL:AY091241 IPI:IPI00541260 RefSeq:NP_564938.1 UniGene:At.27154
            ProteinModelPortal:Q8VZS3 SMR:Q8VZS3 IntAct:Q8VZS3
            EnsemblPlants:AT1G68670.1 GeneID:843197 KEGG:ath:AT1G68670
            TAIR:At1g68670 HOGENOM:HOG000237574 InParanoid:Q8VZS3 OMA:EHESSPE
            PhylomeDB:Q8VZS3 ProtClustDB:CLSN2687960 ArrayExpress:Q8VZS3
            Genevestigator:Q8VZS3 Uniprot:Q8VZS3
        Length = 354

 Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 31/58 (53%), Positives = 39/58 (67%)

Query:    43 TDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
             T  K R  W+P+LH RF+ A+ QLGG+  ATPK +   M + GLT   +KSHLQKYRL
Sbjct:   212 THRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRL 269


>TAIR|locus:2205339 [details] [associations]
            symbol:HRS1 "HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY
            ROOT  SHORTENING 1" species:3702 "Arabidopsis thaliana" [GO:0005634
            "nucleus" evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0016036 "cellular response to
            phosphate starvation" evidence=IMP] [GO:0080022 "primary root
            development" evidence=IMP] [GO:0000041 "transition metal ion
            transport" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011810
            GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0080022 GO:GO:0016036 HSSP:O49397
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 HOGENOM:HOG000237574 EMBL:AF367336 EMBL:AY124865
            IPI:IPI00529437 PIR:F86267 RefSeq:NP_563926.1 UniGene:At.20366
            ProteinModelPortal:Q9FX67 SMR:Q9FX67 STRING:Q9FX67
            EnsemblPlants:AT1G13300.1 GeneID:837890 KEGG:ath:AT1G13300
            TAIR:At1g13300 eggNOG:NOG274505 InParanoid:Q9FX67 OMA:TRDESMR
            PhylomeDB:Q9FX67 ProtClustDB:CLSN2687791 Genevestigator:Q9FX67
            Uniprot:Q9FX67
        Length = 344

 Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 35/81 (43%), Positives = 46/81 (56%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
             K R  W+  LH RF+ A+  LGG   ATPK + + M + GLT   +KSHLQKYRL     
Sbjct:   181 KQRRCWSSQLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRP 240

Query:   106 GQA--NIGNNKIAH-TGIGGM 123
              Q   N GN++  H   +GG+
Sbjct:   241 RQTVPNNGNSQTQHFVVVGGL 261


>TAIR|locus:2010297 [details] [associations]
            symbol:AT1G49560 "AT1G49560" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
            GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011807 EMBL:AK221631
            IPI:IPI00546952 PIR:B96532 RefSeq:NP_564549.1 UniGene:At.38204
            ProteinModelPortal:Q9FX84 SMR:Q9FX84 EnsemblPlants:AT1G49560.1
            GeneID:841380 KEGG:ath:AT1G49560 TAIR:At1g49560 InParanoid:Q9FX84
            OMA:SSMEDVE PhylomeDB:Q9FX84 ProtClustDB:CLSN2917204
            Genevestigator:Q9FX84 Uniprot:Q9FX84
        Length = 333

 Score = 150 (57.9 bits), Expect = 7.7e-08, P = 7.7e-08
 Identities = 30/55 (54%), Positives = 37/55 (67%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
             K R  W P+LH RF++A+ QLGG   ATPK + + M   GLT   +KSHLQKYRL
Sbjct:   192 KQRRCWNPELHRRFVDALQQLGGPGVATPKQIREHMQEEGLTNDEVKSHLQKYRL 246


>TAIR|locus:2115070 [details] [associations]
            symbol:AT4G37180 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
            GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00537470
            RefSeq:NP_849513.1 UniGene:At.4657 ProteinModelPortal:F4JRB0
            SMR:F4JRB0 PRIDE:F4JRB0 EnsemblPlants:AT4G37180.2 GeneID:829872
            KEGG:ath:AT4G37180 OMA:SCRNDET Uniprot:F4JRB0
        Length = 363

 Score = 150 (57.9 bits), Expect = 9.5e-08, P = 9.5e-08
 Identities = 27/58 (46%), Positives = 40/58 (68%)

Query:    48 RLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLH 105
             R +W+ +LH +F++A+++LGG   ATPK +  LM + GLT   +KSHLQKYR+    H
Sbjct:   219 RRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKH 276


>TAIR|locus:2008585 [details] [associations]
            symbol:ARR11 "response regulator 11" species:3702
            "Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
            activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
            transduction system" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS;IDA]
            [GO:0009736 "cytokinin mediated signaling pathway"
            evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
            evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
            Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
            SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
            PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
            EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
            RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
            SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
            GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
            HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
            ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
            Uniprot:Q9FXD6
        Length = 521

 Score = 154 (59.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 38/98 (38%), Positives = 53/98 (54%)

Query:     4 HHQNQGKSMH-SSSRMPIPTERHLFLQGGSGPGDSGLVLSTDAKPRLKWTPDLHERFIEA 62
             H    G+ +     R     E+ L LQ  S P  S     +  K R+ W+ +LH +F+ A
Sbjct:   156 HFLGGGEDVSFGKKRKDFDFEKKL-LQDESDPSSS-----SSKKARVVWSFELHHKFVNA 209

Query:    63 VNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
             VNQ+G   KA PK ++ LM +P LT  ++ SHLQKYRL
Sbjct:   210 VNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL 247

 Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query:   256 PQANQPTDCSMDSCLTSCEGSQKDQEIHNGGVRLRPYHGTPTL 298
             P+++       D  LT  +G   ++ + N G++ + Y  +P+L
Sbjct:   449 PESHHSVSLDTDLDLTWLQG---ERFLANTGLQFQDYSSSPSL 488


>TAIR|locus:2040194 [details] [associations]
            symbol:RR12 "response regulator 12" species:3702
            "Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
            activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
            transduction system" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0009736
            "cytokinin mediated signaling pathway" evidence=IGI;TAS]
            [GO:0009735 "response to cytokinin stimulus" evidence=IGI]
            [GO:0010380 "regulation of chlorophyll biosynthetic process"
            evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
            process" evidence=IGI] [GO:0048367 "shoot system development"
            evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
            InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
            Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
            GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
            GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
            IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
            ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
            GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
            InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
            Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
        Length = 596

 Score = 152 (58.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
 Identities = 32/65 (49%), Positives = 45/65 (69%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KNL 104
             K R+ WT +LH++F+ AVNQLG  +KA PK ++ LM +  LT  ++ SHLQK+RL  K +
Sbjct:   195 KQRVVWTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRI 253

Query:   105 HGQAN 109
              G AN
Sbjct:   254 SGVAN 258

 Score = 39 (18.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
 Identities = 12/49 (24%), Positives = 19/49 (38%)

Query:   132 PVTVPGERMPEANATHMNNLSIGPQPNKSLHISETIQMQIEVQRRLHEQ 180
             P   PG ++ +      N +S    P    H S +I  Q +V    H +
Sbjct:   420 PPGFPGHQINKRLEHWSNAVSSSTHPPPPAHNSNSINHQFDVSPLPHSR 468


>UNIPROTKB|Q7Y0W3 [details] [associations]
            symbol:Q7Y0W3 "Two-component response regulator EHD1"
            species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0048576 "positive regulation of short-day
            photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
            InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
            PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
            GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
            InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
            eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
            ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
            Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
        Length = 341

 Score = 142 (55.0 bits), Expect = 6.5e-07, P = 6.5e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
             K RL WT  LH +FI AVN LG  DKA PK ++ +M +  LT   + SHLQKYR+
Sbjct:   198 KSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYRM 251


>UNIPROTKB|Q7Y0W5 [details] [associations]
            symbol:EHD1 "Two-component response regulator EHD1"
            species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
            regulation of short-day photoperiodism, flowering" evidence=IMP]
            InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
            Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
            GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
            InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
            InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
            EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
            Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
        Length = 341

 Score = 142 (55.0 bits), Expect = 6.5e-07, P = 6.5e-07
 Identities = 29/55 (52%), Positives = 36/55 (65%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100
             K RL WT  LH +FI AVN LG  DKA PK ++ +M +  LT   + SHLQKYR+
Sbjct:   198 KSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYRM 251


>TAIR|locus:2141020 [details] [associations]
            symbol:APRR2 species:3702 "Arabidopsis thaliana"
            [GO:0000156 "phosphorelay response regulator activity"
            evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
            system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
            InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
            Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
            GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
            EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
            PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
            RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
            RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
            SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
            EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
            EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
            GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
            InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
            ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
            Uniprot:Q6LA43
        Length = 535

 Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 26/61 (42%), Positives = 45/61 (73%)

Query:    45 AKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS-KN 103
             ++ ++ WTP+LH++F++AV QLG  D+A P  +++LM +  LT +++ SHLQK+R   KN
Sbjct:   295 SRKKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKN 353

Query:   104 L 104
             +
Sbjct:   354 I 354


>TAIR|locus:2116587 [details] [associations]
            symbol:RR10 "response regulator 10" species:3702
            "Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
            activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
            transduction system" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS;IDA]
            [GO:0009736 "cytokinin mediated signaling pathway"
            evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
            evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
            process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
            metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
            development" evidence=IGI] [GO:0080022 "primary root development"
            evidence=IGI] [GO:0010029 "regulation of seed germination"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
            InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
            SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
            GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
            GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
            EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
            PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
            ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
            PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
            KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
            HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
            ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
            Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
            InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
        Length = 552

 Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 25/56 (44%), Positives = 40/56 (71%)

Query:    46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
             KPR+ WT +LH +F+ AV+ LG  ++A PK ++ LM +  LT  ++ SHLQK+R++
Sbjct:   183 KPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      416       416   0.00081  118 3  11 23  0.46    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  49
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  266 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.66u 0.13s 42.79t   Elapsed:  00:00:02
  Total cpu time:  42.66u 0.13s 42.79t   Elapsed:  00:00:02
  Start:  Thu May  9 13:43:43 2013   End:  Thu May  9 13:43:45 2013

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