Query 014891
Match_columns 416
No_of_seqs 259 out of 809
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 02:58:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bay_A PRE-mRNA splicing facto 98.9 9.5E-10 3.3E-14 82.1 3.8 55 355-415 3-58 (61)
2 2kr4_A Ubiquitin conjugation f 98.7 8.8E-09 3E-13 81.9 4.5 55 353-413 12-66 (85)
3 2f42_A STIP1 homology and U-bo 98.7 1.5E-08 5E-13 91.7 4.9 56 354-414 105-160 (179)
4 2yu4_A E3 SUMO-protein ligase 98.6 2E-08 6.7E-13 81.3 4.7 57 353-412 5-68 (94)
5 2kre_A Ubiquitin conjugation f 98.6 1.6E-08 5.5E-13 82.9 3.6 55 353-413 27-81 (100)
6 1wgm_A Ubiquitin conjugation f 98.6 2.7E-08 9.2E-13 81.3 4.0 55 353-413 20-75 (98)
7 1t1h_A Gspef-atpub14, armadill 98.5 1.2E-07 4E-12 73.5 5.4 56 353-413 6-61 (78)
8 2ct2_A Tripartite motif protei 98.5 1.6E-07 5.5E-12 74.1 5.3 63 351-413 11-74 (88)
9 2xeu_A Ring finger protein 4; 98.3 2.3E-07 7.9E-12 68.6 3.0 57 356-415 4-64 (64)
10 2ysl_A Tripartite motif-contai 98.3 3.3E-07 1.1E-11 69.9 3.9 57 352-411 17-73 (73)
11 2c2l_A CHIP, carboxy terminus 98.3 2.4E-07 8.2E-12 88.3 3.8 54 354-412 207-260 (281)
12 3ng2_A RNF4, snurf, ring finge 98.3 3.2E-07 1.1E-11 69.5 3.0 59 354-415 9-71 (71)
13 2ecw_A Tripartite motif-contai 98.2 1.3E-06 4.5E-11 68.1 5.7 60 353-415 17-79 (85)
14 2ecv_A Tripartite motif-contai 98.2 1E-06 3.5E-11 68.7 4.3 60 352-414 16-78 (85)
15 1g25_A CDK-activating kinase a 98.2 1.3E-06 4.3E-11 65.3 4.5 58 356-415 4-63 (65)
16 2egp_A Tripartite motif-contai 98.2 5.1E-07 1.7E-11 69.8 1.7 60 352-414 9-72 (79)
17 1jm7_A BRCA1, breast cancer ty 98.1 1.2E-06 4E-11 72.4 3.7 57 354-413 20-76 (112)
18 2ysj_A Tripartite motif-contai 98.1 2.8E-06 9.6E-11 62.9 5.2 48 351-401 16-63 (63)
19 2ecy_A TNF receptor-associated 98.1 3.4E-06 1.2E-10 63.1 5.4 54 352-410 12-65 (66)
20 3ztg_A E3 ubiquitin-protein li 98.1 4E-06 1.4E-10 66.8 5.5 55 353-411 11-67 (92)
21 3htk_C E3 SUMO-protein ligase 98.0 1.9E-06 6.6E-11 81.8 3.3 57 352-412 178-237 (267)
22 3lrq_A E3 ubiquitin-protein li 98.0 6.3E-06 2.1E-10 67.1 4.8 58 353-415 20-78 (100)
23 3fl2_A E3 ubiquitin-protein li 97.9 6.9E-06 2.4E-10 69.3 4.6 48 355-407 52-99 (124)
24 2yur_A Retinoblastoma-binding 97.9 5.1E-06 1.8E-10 63.7 3.5 53 353-409 13-66 (74)
25 4ap4_A E3 ubiquitin ligase RNF 97.9 6.9E-06 2.4E-10 69.3 4.6 82 329-415 48-133 (133)
26 2ecm_A Ring finger and CHY zin 97.9 9.3E-06 3.2E-10 58.1 3.6 49 355-406 5-54 (55)
27 2djb_A Polycomb group ring fin 97.8 1.4E-05 4.8E-10 60.8 4.5 55 352-412 12-67 (72)
28 3hct_A TNF receptor-associated 97.8 1.9E-05 6.5E-10 66.1 5.3 59 349-412 12-70 (118)
29 2ecj_A Tripartite motif-contai 97.8 1.4E-05 4.9E-10 57.7 3.9 47 352-401 12-58 (58)
30 2kiz_A E3 ubiquitin-protein li 97.8 4.2E-05 1.4E-09 57.4 6.5 52 353-407 12-63 (69)
31 2csy_A Zinc finger protein 183 97.8 1.6E-05 5.5E-10 61.8 4.1 47 354-406 14-60 (81)
32 1z6u_A NP95-like ring finger p 97.8 1.8E-05 6.3E-10 69.3 4.7 49 355-408 78-126 (150)
33 2y43_A E3 ubiquitin-protein li 97.8 1.9E-05 6.6E-10 63.8 4.4 55 353-413 20-75 (99)
34 4ayc_A E3 ubiquitin-protein li 97.8 1.2E-05 4.1E-10 69.2 3.3 45 357-407 55-99 (138)
35 2d8t_A Dactylidin, ring finger 97.7 6.6E-06 2.3E-10 62.4 1.0 53 354-412 14-66 (71)
36 2ect_A Ring finger protein 126 97.7 1.6E-05 5.3E-10 61.3 2.9 57 352-411 12-68 (78)
37 1rmd_A RAG1; V(D)J recombinati 97.7 3E-05 1E-09 64.5 4.3 55 353-412 21-75 (116)
38 2ckl_A Polycomb group ring fin 97.6 3.6E-05 1.2E-09 63.2 4.3 49 354-408 14-63 (108)
39 2l0b_A E3 ubiquitin-protein li 97.6 3.9E-05 1.3E-09 61.2 4.2 52 353-407 38-89 (91)
40 4ap4_A E3 ubiquitin ligase RNF 97.6 3.7E-05 1.3E-09 64.7 3.3 59 354-415 6-68 (133)
41 2ckl_B Ubiquitin ligase protei 97.5 6.9E-05 2.4E-09 66.2 4.7 51 352-407 51-102 (165)
42 2ea6_A Ring finger protein 4; 97.5 6E-05 2E-09 56.2 3.7 51 353-406 13-67 (69)
43 1x4j_A Ring finger protein 38; 97.5 5.1E-05 1.7E-09 58.0 3.2 53 353-408 21-73 (75)
44 3l11_A E3 ubiquitin-protein li 97.5 2.7E-05 9.3E-10 64.6 1.7 50 353-407 13-62 (115)
45 2ep4_A Ring finger protein 24; 97.5 0.00011 3.8E-09 55.8 4.7 49 355-406 15-63 (74)
46 1iym_A EL5; ring-H2 finger, ub 97.5 4.9E-05 1.7E-09 54.3 2.4 49 355-406 5-54 (55)
47 4ic3_A E3 ubiquitin-protein li 97.4 5.1E-05 1.7E-09 58.2 2.2 51 354-416 23-74 (74)
48 1jm7_B BARD1, BRCA1-associated 97.4 2.1E-05 7.3E-10 65.7 -0.2 52 353-412 20-72 (117)
49 3hcs_A TNF receptor-associated 97.4 9.3E-05 3.2E-09 65.7 3.8 59 350-413 13-71 (170)
50 1chc_A Equine herpes virus-1 r 97.4 9.8E-05 3.4E-09 55.1 3.1 46 356-406 6-51 (68)
51 2ecg_A Baculoviral IAP repeat- 97.4 8.9E-05 3E-09 56.9 2.9 51 354-416 24-75 (75)
52 1bor_A Transcription factor PM 97.2 3.9E-05 1.3E-09 55.6 -0.2 47 354-409 5-51 (56)
53 1e4u_A Transcriptional repress 97.2 0.00034 1.2E-08 54.4 4.9 56 353-411 9-66 (78)
54 2ecl_A Ring-box protein 2; RNF 97.2 0.00017 5.8E-09 56.2 2.6 52 357-411 28-80 (81)
55 1v87_A Deltex protein 2; ring- 97.1 0.00041 1.4E-08 57.2 4.9 36 373-408 58-95 (114)
56 2ecn_A Ring finger protein 141 97.1 7.6E-05 2.6E-09 56.1 0.2 53 353-412 13-65 (70)
57 3knv_A TNF receptor-associated 97.0 0.0002 6.7E-09 62.0 1.3 51 351-406 27-77 (141)
58 2vje_B MDM4 protein; proto-onc 97.0 0.00059 2E-08 50.6 3.7 52 357-416 9-63 (63)
59 2y1n_A E3 ubiquitin-protein li 96.8 0.00053 1.8E-08 68.8 3.6 52 356-412 333-384 (389)
60 2vje_A E3 ubiquitin-protein li 96.8 0.00084 2.9E-08 49.9 3.7 52 357-416 10-64 (64)
61 3m62_A Ubiquitin conjugation f 96.8 0.00076 2.6E-08 74.4 4.6 53 354-412 890-943 (968)
62 1wim_A KIAA0161 protein; ring 96.6 0.00037 1.3E-08 55.7 0.3 59 354-412 4-71 (94)
63 3dpl_R Ring-box protein 1; ubi 96.6 0.0013 4.6E-08 54.0 3.4 41 367-410 64-104 (106)
64 2yho_A E3 ubiquitin-protein li 96.2 0.0018 6.1E-08 50.2 2.1 48 356-415 19-67 (79)
65 3t6p_A Baculoviral IAP repeat- 96.1 0.001 3.5E-08 65.9 0.3 49 356-416 296-345 (345)
66 2d8s_A Cellular modulator of i 96.1 0.0025 8.7E-08 49.6 2.5 52 356-409 16-72 (80)
67 4a0k_B E3 ubiquitin-protein li 95.6 0.0022 7.4E-08 53.7 0.0 39 369-410 77-115 (117)
68 2ea5_A Cell growth regulator w 95.3 0.0073 2.5E-07 45.3 2.3 48 356-415 16-64 (68)
69 3i2d_A E3 SUMO-protein ligase 93.2 0.073 2.5E-06 52.8 4.8 52 356-411 250-304 (371)
70 4fo9_A E3 SUMO-protein ligase 92.0 0.13 4.5E-06 50.8 4.8 53 355-411 215-270 (360)
71 1uuj_A Platelet-activating fac 92.0 0.16 5.4E-06 40.1 4.3 36 140-175 7-42 (88)
72 2k5c_A Uncharacterized protein 91.7 0.0094 3.2E-07 46.0 -2.9 65 350-414 3-75 (95)
73 1vyx_A ORF K3, K3RING; zinc-bi 90.8 0.16 5.3E-06 37.1 3.0 48 356-407 7-59 (60)
74 2nxp_A Transcription initiatio 88.3 1 3.4E-05 39.2 6.7 68 198-265 33-100 (156)
75 4ayb_P DNA-directed RNA polyme 87.1 0.029 9.9E-07 38.7 -3.0 27 373-404 6-32 (48)
76 1deq_A Fibrinogen (alpha chain 85.5 8.2 0.00028 38.1 12.0 73 55-131 54-126 (390)
77 3vk6_A E3 ubiquitin-protein li 85.4 0.64 2.2E-05 37.4 3.5 34 371-406 15-48 (101)
78 2j49_A Transcription initiatio 83.1 0.89 3E-05 39.3 3.7 65 198-263 16-80 (148)
79 2ecn_A Ring finger protein 141 81.5 0.33 1.1E-05 35.7 0.2 46 330-377 16-70 (70)
80 2j4b_A TAF5, transcription ini 80.9 3.5 0.00012 35.0 6.7 66 197-263 13-78 (138)
81 2xtc_A F-box-like/WD repeat-co 78.5 2.3 7.8E-05 33.6 4.3 33 142-174 4-36 (90)
82 2ct0_A Non-SMC element 1 homol 77.9 1.3 4.6E-05 33.5 2.7 34 375-409 33-66 (74)
83 2jny_A Uncharacterized BCR; st 74.5 1.1 3.7E-05 33.5 1.3 42 350-413 5-46 (67)
84 2hf1_A Tetraacyldisaccharide-1 73.9 0.87 3E-05 34.1 0.7 40 352-413 5-44 (68)
85 2jr6_A UPF0434 protein NMA0874 73.3 1.3 4.5E-05 33.1 1.5 20 394-413 25-44 (68)
86 2js4_A UPF0434 protein BB2007; 72.2 0.96 3.3E-05 34.0 0.6 41 351-413 4-44 (70)
87 2pk7_A Uncharacterized protein 69.2 1.4 4.7E-05 33.1 0.8 20 394-413 25-44 (69)
88 2jrr_A Uncharacterized protein 63.5 1.6 5.6E-05 32.5 0.3 19 393-411 38-56 (67)
89 2jo8_A Serine/threonine-protei 62.8 9.1 0.00031 26.8 3.9 33 44-76 3-36 (51)
90 2xjy_A Rhombotin-2; oncoprotei 61.8 4.8 0.00016 33.1 2.9 76 330-409 3-80 (131)
91 3swy_A Cyclic nucleotide-gated 60.6 31 0.0011 23.6 6.2 41 91-131 3-43 (46)
92 2lni_A Stress-induced-phosphop 59.9 52 0.0018 24.7 9.7 92 148-247 20-112 (133)
93 1vd4_A Transcription initiatio 59.6 4.3 0.00015 28.5 1.9 39 371-409 14-53 (62)
94 1xou_B Z5138 gene product; coi 59.0 40 0.0014 25.4 7.2 69 53-131 11-82 (95)
95 2jz8_A Uncharacterized protein 58.4 3.1 0.00011 32.5 1.0 19 393-411 46-64 (87)
96 2kpi_A Uncharacterized protein 58.3 3.7 0.00013 29.4 1.3 40 350-413 5-46 (56)
97 2jvm_A Uncharacterized protein 58.2 3.2 0.00011 31.9 1.0 17 393-409 51-67 (80)
98 3q15_A PSP28, response regulat 58.0 50 0.0017 31.0 9.9 31 216-246 98-128 (378)
99 3k1l_B Fancl; UBC, ring, RWD, 55.5 3.6 0.00012 40.5 1.2 34 374-407 332-373 (381)
100 3gwk_C SAG1039, putative uncha 55.3 66 0.0023 24.4 11.3 36 47-82 5-43 (98)
101 2kck_A TPR repeat; tetratricop 55.0 56 0.0019 23.5 8.5 94 149-248 11-106 (112)
102 1f2i_G Fusion of N-terminal 17 53.3 15 0.00052 25.9 4.1 40 370-409 18-63 (73)
103 3swf_A CGMP-gated cation chann 53.0 36 0.0012 25.7 6.0 42 90-131 4-45 (74)
104 3ghg_A Fibrinogen alpha chain; 52.7 1.3E+02 0.0044 30.9 11.9 28 171-198 168-195 (562)
105 3u4t_A TPR repeat-containing p 51.3 51 0.0017 28.7 8.2 51 192-247 86-136 (272)
106 3twe_A Alpha4H; unknown functi 48.8 25 0.00086 20.5 3.5 22 89-110 4-25 (27)
107 3nw0_A Non-structural maintena 48.8 16 0.00055 33.7 4.4 32 376-408 199-230 (238)
108 1vyh_C Platelet-activating fac 46.8 4.1 0.00014 39.6 0.0 32 142-173 7-38 (410)
109 2wbs_A Krueppel-like factor 4; 46.1 24 0.00082 25.7 4.4 33 376-408 43-78 (89)
110 1weo_A Cellulose synthase, cat 46.1 17 0.00058 28.5 3.4 51 355-407 16-70 (93)
111 2d68_A FOP, FGFR1OP; alpha hel 46.0 36 0.0012 26.2 5.3 37 143-179 18-55 (82)
112 2dna_A Unnamed protein product 44.3 8.1 0.00028 28.7 1.3 25 184-208 34-60 (67)
113 2fiy_A Protein FDHE homolog; F 44.1 13 0.00046 35.7 3.2 11 327-337 180-190 (309)
114 1x61_A Thyroid receptor intera 44.0 32 0.0011 24.6 4.7 59 330-390 6-66 (72)
115 2djb_A Polycomb group ring fin 43.0 9 0.00031 27.9 1.4 45 330-375 16-70 (72)
116 2gmg_A Hypothetical protein PF 42.5 7.3 0.00025 31.5 0.8 29 369-405 66-94 (105)
117 3mkr_A Coatomer subunit epsilo 42.1 1.7E+02 0.0059 26.5 10.6 89 145-246 66-157 (291)
118 1elr_A TPR2A-domain of HOP; HO 42.1 1E+02 0.0035 22.7 11.1 97 148-247 8-107 (131)
119 1m3v_A FLIN4, fusion of the LI 41.5 7.3 0.00025 31.8 0.7 76 330-409 6-83 (122)
120 2m0f_A Zinc finger and BTB dom 41.4 10 0.00034 21.0 1.2 14 395-408 2-15 (29)
121 2xz2_A CSTF-50, isoform B; RNA 40.6 41 0.0014 24.7 4.5 34 141-174 14-47 (66)
122 2xcb_A PCRH, regulatory protei 39.8 1.3E+02 0.0046 23.5 8.8 91 149-246 23-113 (142)
123 1p7a_A BF3, BKLF, kruppel-like 39.5 13 0.00044 22.3 1.5 15 394-408 10-24 (37)
124 2ho1_A Type 4 fimbrial biogene 39.4 1.8E+02 0.006 24.7 10.8 96 145-247 106-203 (252)
125 4b4t_P 26S proteasome regulato 39.1 3E+02 0.01 27.2 17.5 108 142-249 135-248 (445)
126 2els_A Zinc finger protein 406 39.0 13 0.00045 22.1 1.6 15 394-408 8-22 (36)
127 2vgx_A Chaperone SYCD; alterna 38.9 1.5E+02 0.0051 23.7 10.9 92 149-247 26-117 (148)
128 1a17_A Serine/threonine protei 38.7 1.4E+02 0.0047 23.3 9.3 93 147-245 50-143 (166)
129 1m1j_A Fibrinogen alpha subuni 38.5 2.4E+02 0.008 28.5 11.1 79 118-199 111-197 (491)
130 2kvh_A Zinc finger and BTB dom 38.3 13 0.00043 20.5 1.3 14 395-408 3-16 (27)
131 1ard_A Yeast transcription fac 38.0 12 0.0004 20.7 1.1 14 395-408 2-15 (29)
132 3uq3_A Heat shock protein STI1 37.8 1.8E+02 0.0062 24.4 10.9 98 146-247 7-107 (258)
133 3rkv_A Putative peptidylprolyl 37.3 1.6E+02 0.0053 23.5 9.9 53 190-247 73-125 (162)
134 3knv_A TNF receptor-associated 37.1 12 0.00042 31.4 1.5 77 330-409 32-120 (141)
135 4gcn_A Protein STI-1; structur 37.0 1.5E+02 0.005 23.0 10.2 97 148-247 12-111 (127)
136 2knz_A Ubiquilin-4; cytoplasm, 36.7 13 0.00046 25.9 1.4 22 186-207 28-51 (53)
137 3ro2_A PINS homolog, G-protein 36.6 2.1E+02 0.0072 24.8 10.7 98 149-247 10-111 (338)
138 1znf_A 31ST zinc finger from X 36.5 12 0.00042 20.3 1.0 13 396-408 2-14 (27)
139 2bwb_A Ubiquitin-like protein 36.4 13 0.00045 25.2 1.3 19 186-204 24-44 (46)
140 3sf4_A G-protein-signaling mod 36.1 2.5E+02 0.0084 25.5 10.8 99 148-247 13-115 (406)
141 2i5o_A DNA polymerase ETA; zin 35.7 12 0.00042 24.7 1.0 18 392-409 6-23 (39)
142 2xqn_T Testin, TESS; metal-bin 35.3 20 0.00068 29.0 2.5 71 331-408 5-76 (126)
143 1wr1_B Ubiquitin-like protein 35.2 15 0.00052 26.3 1.5 22 185-206 33-56 (58)
144 2ebt_A Krueppel-like factor 5; 35.2 46 0.0016 24.6 4.5 33 376-408 53-88 (100)
145 2dah_A Ubiquilin-3; UBA domain 35.2 15 0.00053 25.8 1.5 22 186-207 26-49 (54)
146 3sz7_A HSC70 cochaperone (SGT) 34.6 1.7E+02 0.006 23.2 11.0 94 146-247 13-107 (164)
147 2kvf_A Zinc finger and BTB dom 34.5 13 0.00046 20.4 1.0 14 395-408 3-16 (28)
148 2kvg_A Zinc finger and BTB dom 34.3 12 0.0004 20.8 0.7 14 395-408 3-16 (27)
149 2rgt_A Fusion of LIM/homeobox 34.2 11 0.00037 32.5 0.7 82 330-411 66-149 (169)
150 2m0e_A Zinc finger and BTB dom 34.1 16 0.00054 20.0 1.3 14 396-409 3-16 (29)
151 3iv1_A Tumor susceptibility ge 34.0 1.5E+02 0.0052 22.4 8.0 53 53-113 10-62 (78)
152 2y4t_A DNAJ homolog subfamily 33.8 2.7E+02 0.0091 26.0 10.8 54 192-246 269-322 (450)
153 1yuz_A Nigerythrin; rubrythrin 33.8 14 0.00048 33.2 1.4 9 396-404 187-195 (202)
154 3ulq_A Response regulator aspa 33.5 2.9E+02 0.0099 25.5 19.7 101 145-247 104-212 (383)
155 2elt_A Zinc finger protein 406 33.5 17 0.00059 21.4 1.4 15 394-408 8-22 (36)
156 1b8t_A Protein (CRP1); LIM dom 33.4 36 0.0012 29.8 4.1 59 330-390 8-67 (192)
157 4gkw_A Spindle assembly abnorm 33.3 2.1E+02 0.0072 23.8 9.0 66 46-111 63-130 (167)
158 1bbo_A Human enhancer-binding 33.1 29 0.00098 22.9 2.7 34 375-408 6-42 (57)
159 2elx_A Zinc finger protein 406 33.0 18 0.00062 21.0 1.5 15 394-408 6-20 (35)
160 1x6a_A LIMK-2, LIM domain kina 32.9 80 0.0027 23.0 5.4 64 324-389 10-75 (81)
161 1rik_A E6APC1 peptide; E6-bind 32.7 16 0.00056 20.1 1.1 15 395-409 2-16 (29)
162 2epa_A Krueppel-like factor 10 32.5 36 0.0012 23.8 3.3 34 376-409 25-63 (72)
163 3zbh_A ESXA; unknown function, 32.3 1.6E+02 0.0053 22.0 10.1 36 47-82 6-44 (99)
164 3ulq_A Response regulator aspa 32.3 1.2E+02 0.0042 28.1 8.0 61 190-250 113-174 (383)
165 2jy5_A Ubiquilin-1; UBA, alter 32.2 15 0.00052 25.5 1.1 21 186-206 29-51 (52)
166 2cp9_A EF-TS, EF-TSMT, elongat 32.1 39 0.0013 24.7 3.3 22 186-207 26-49 (64)
167 2kmk_A Zinc finger protein GFI 32.0 50 0.0017 23.3 4.1 34 375-408 34-70 (82)
168 2lvu_A Zinc finger and BTB dom 38.2 9.7 0.00033 20.8 0.0 15 396-410 3-17 (26)
169 4a1s_A PINS, partner of inscut 31.9 2.8E+02 0.0094 25.5 10.5 98 149-247 53-154 (411)
170 2elp_A Zinc finger protein 406 31.8 19 0.00064 21.5 1.4 15 394-408 8-22 (37)
171 3q49_B STIP1 homology and U bo 31.8 1.6E+02 0.0056 22.1 9.3 93 147-247 12-105 (137)
172 2m0d_A Zinc finger and BTB dom 31.8 20 0.00067 19.7 1.4 14 395-408 3-16 (30)
173 1paa_A Yeast transcription fac 31.8 16 0.00056 20.3 1.0 14 396-409 3-16 (30)
174 2lv2_A Insulinoma-associated p 31.6 27 0.00092 26.5 2.5 34 376-409 34-70 (85)
175 1yke_B RNA polymerase II holoe 31.6 2.4E+02 0.0082 23.9 10.7 75 58-132 54-131 (151)
176 2elq_A Zinc finger protein 406 31.5 19 0.00066 21.3 1.4 15 394-408 8-22 (36)
177 2dba_A Smooth muscle cell asso 31.3 1.7E+02 0.0058 22.1 10.8 95 145-247 29-127 (148)
178 2e72_A POGO transposable eleme 31.1 20 0.00069 24.7 1.5 18 393-410 10-27 (49)
179 1iml_A CRIP, cysteine rich int 30.9 16 0.00056 26.7 1.2 48 350-404 21-70 (76)
180 2vq2_A PILW, putative fimbrial 30.9 2.2E+02 0.0074 23.2 10.5 92 148-246 80-174 (225)
181 2elr_A Zinc finger protein 406 30.9 22 0.00074 20.9 1.6 15 394-408 8-22 (36)
182 4f3v_A ESX-1 secretion system 30.7 3.3E+02 0.011 25.3 11.3 105 136-246 94-198 (282)
183 2adr_A ADR1; transcription reg 30.5 34 0.0011 22.9 2.7 33 376-408 8-43 (60)
184 4ioe_A Secreted protein ESXB; 30.2 1.7E+02 0.0057 21.7 11.5 36 47-82 6-44 (93)
185 1klr_A Zinc finger Y-chromosom 30.1 17 0.00058 20.1 0.9 13 396-408 3-15 (30)
186 1wgn_A UBAP1, ubiquitin associ 29.9 47 0.0016 24.1 3.3 23 185-207 34-58 (63)
187 1vej_A Riken cDNA 4931431F19; 29.5 20 0.00068 27.0 1.4 23 185-207 45-69 (74)
188 1xaw_A Occludin; coiled-coil, 29.4 2.6E+02 0.0087 23.6 9.1 100 28-131 21-129 (140)
189 1srk_A Zinc finger protein ZFP 29.2 23 0.00077 20.7 1.4 15 394-408 6-20 (35)
190 2elo_A Zinc finger protein 406 29.1 20 0.00068 21.3 1.1 15 394-408 8-22 (37)
191 4gzn_C ZFP-57, zinc finger pro 28.8 52 0.0018 23.0 3.5 35 374-408 8-45 (60)
192 2lvr_A Zinc finger and BTB dom 34.7 12 0.00041 20.9 0.0 15 395-409 3-17 (30)
193 2drp_A Protein (tramtrack DNA- 28.3 51 0.0017 22.4 3.4 34 375-408 15-53 (66)
194 3u3w_A Transcriptional activat 28.2 3.2E+02 0.011 24.2 10.2 16 232-247 168-183 (293)
195 1m1j_C Fibrinogen gamma chain; 28.1 4.3E+02 0.015 26.2 11.2 58 51-109 31-100 (409)
196 3uk3_C Zinc finger protein 217 28.1 43 0.0015 22.0 2.9 34 375-408 9-45 (57)
197 3ieg_A DNAJ homolog subfamily 27.5 3.2E+02 0.011 24.1 11.0 60 145-206 155-214 (359)
198 2elv_A Zinc finger protein 406 27.4 26 0.00089 20.7 1.5 15 394-408 8-22 (36)
199 4i17_A Hypothetical protein; T 27.3 2.7E+02 0.0093 23.2 10.7 95 150-248 48-146 (228)
200 3hym_B Cell division cycle pro 27.2 3.1E+02 0.011 23.9 11.3 95 150-246 165-263 (330)
201 2lvt_A Zinc finger and BTB dom 33.2 13 0.00045 20.7 0.0 14 396-409 3-16 (29)
202 1wyy_A E2 glycoprotein; membra 27.2 2.8E+02 0.0097 23.4 10.4 87 48-152 9-99 (149)
203 2lce_A B-cell lymphoma 6 prote 27.1 62 0.0021 22.7 3.8 34 375-408 22-58 (74)
204 1x6e_A Zinc finger protein 24; 27.1 56 0.0019 22.8 3.5 35 374-408 18-55 (72)
205 3ghg_A Fibrinogen alpha chain; 27.1 3.3E+02 0.011 27.9 10.2 17 97-113 114-130 (562)
206 2d8y_A Eplin protein; LIM doma 27.1 51 0.0017 24.9 3.4 59 329-389 15-74 (91)
207 2lt7_A Transcriptional regulat 27.0 57 0.002 26.6 4.0 10 356-365 51-60 (133)
208 2g3q_A Protein YBL047C; endocy 26.9 56 0.0019 21.3 3.2 21 186-206 20-42 (43)
209 2xpi_A Anaphase-promoting comp 26.8 3.4E+02 0.012 26.5 10.6 22 148-169 411-432 (597)
210 2ekk_A UBA domain from E3 ubiq 26.7 56 0.0019 21.8 3.2 22 185-206 24-46 (47)
211 2v5f_A Prolyl 4-hydroxylase su 26.6 1.9E+02 0.0066 21.7 6.9 57 190-246 15-73 (104)
212 2vyi_A SGTA protein; chaperone 26.3 1.9E+02 0.0064 21.0 11.0 95 145-247 13-108 (131)
213 1ykh_B RNA polymerase II holoe 26.1 2.8E+02 0.0094 22.9 10.7 74 57-130 53-129 (132)
214 1a1h_A QGSR zinc finger peptid 26.1 55 0.0019 23.6 3.4 35 374-408 38-75 (90)
215 3uq3_A Heat shock protein STI1 26.0 2.9E+02 0.0098 23.0 12.0 95 145-247 140-235 (258)
216 4rxn_A Rubredoxin; electron tr 26.0 14 0.00048 26.2 -0.0 17 394-412 35-51 (54)
217 2ytb_A Zinc finger protein 32; 25.8 30 0.001 21.2 1.6 15 394-408 10-24 (42)
218 3mjh_B Early endosome antigen 25.7 11 0.00036 24.2 -0.6 14 396-409 6-19 (34)
219 2el5_A Zinc finger protein 268 25.7 28 0.00095 21.4 1.4 15 394-408 9-23 (42)
220 1a17_A Serine/threonine protei 25.6 2.3E+02 0.0079 21.8 10.9 95 145-247 14-109 (166)
221 1rim_A E6APC2 peptide; E6-bind 25.5 23 0.00078 20.8 0.9 13 396-408 3-15 (33)
222 2de0_X Alpha-(1,6)-fucosyltran 25.5 4.4E+02 0.015 26.9 11.2 78 49-132 47-138 (526)
223 2dak_A Ubiquitin carboxyl-term 25.5 61 0.0021 23.2 3.4 25 185-209 24-50 (63)
224 1njq_A Superman protein; zinc- 25.5 29 0.00098 21.0 1.4 15 394-408 5-19 (39)
225 2rgt_A Fusion of LIM/homeobox 25.4 65 0.0022 27.4 4.2 72 330-409 7-79 (169)
226 2jtn_A LIM domain-binding prot 25.2 43 0.0015 29.0 3.0 60 329-388 119-180 (182)
227 2dkl_A Trinucleotide repeat co 25.2 50 0.0017 25.4 3.0 27 186-212 37-65 (85)
228 1x5w_A Zinc finger protein 64, 25.1 74 0.0025 21.9 3.9 35 374-408 13-50 (70)
229 2eof_A Zinc finger protein 268 25.0 31 0.001 21.4 1.5 15 394-408 11-25 (44)
230 1wyh_A SLIM 2, skeletal muscle 24.8 51 0.0017 23.4 2.9 58 330-389 6-65 (72)
231 2ept_A Zinc finger protein 32; 24.7 30 0.001 21.1 1.5 15 394-408 9-23 (41)
232 2yte_A Zinc finger protein 473 24.7 32 0.0011 21.0 1.6 16 394-409 9-24 (42)
233 2elm_A Zinc finger protein 406 24.7 26 0.0009 21.0 1.1 15 394-408 8-22 (37)
234 2dmd_A Zinc finger protein 64, 24.7 76 0.0026 23.2 4.1 34 375-408 41-77 (96)
235 2enf_A Zinc finger protein 347 24.7 31 0.0011 21.7 1.5 16 394-409 11-26 (46)
236 2v3b_B Rubredoxin 2, rubredoxi 24.7 17 0.00057 25.8 0.1 10 395-404 36-45 (55)
237 3upv_A Heat shock protein STI1 24.5 2.2E+02 0.0076 21.2 10.1 92 148-247 8-100 (126)
238 4gco_A Protein STI-1; structur 24.5 2.4E+02 0.0083 21.7 9.6 92 148-247 17-109 (126)
239 3ro3_A PINS homolog, G-protein 24.3 2.3E+02 0.0079 21.3 11.5 105 144-248 9-118 (164)
240 2en2_A B-cell lymphoma 6 prote 24.2 31 0.0011 21.1 1.4 15 394-408 10-24 (42)
241 2cup_A Skeletal muscle LIM-pro 24.1 18 0.00061 28.0 0.3 72 330-409 6-80 (101)
242 2emi_A Zinc finger protein 484 24.1 31 0.001 21.7 1.4 15 394-408 11-25 (46)
243 2eps_A POZ-, at HOOK-, and zin 24.0 85 0.0029 20.5 3.8 34 374-407 16-53 (54)
244 6rxn_A Rubredoxin; electron tr 23.9 16 0.00056 24.9 -0.0 30 374-404 8-39 (46)
245 1z96_A DNA-damage, UBA-domain 23.9 67 0.0023 20.2 3.1 18 186-203 20-39 (40)
246 2epv_A Zinc finger protein 268 23.9 32 0.0011 21.5 1.5 15 394-408 11-25 (44)
247 4abn_A Tetratricopeptide repea 23.7 4.3E+02 0.015 25.7 10.6 94 145-247 103-207 (474)
248 1ify_A HHR23A, UV excision rep 23.6 64 0.0022 21.9 3.0 22 185-206 23-46 (49)
249 3gw4_A Uncharacterized protein 23.6 2.9E+02 0.0098 22.2 12.9 103 143-247 25-135 (203)
250 2yu5_A Zinc finger protein 473 23.6 36 0.0012 21.1 1.7 16 394-409 11-26 (44)
251 2yts_A Zinc finger protein 484 23.5 32 0.0011 21.6 1.4 15 394-408 11-25 (46)
252 1rut_X Flinc4, fusion protein 23.5 23 0.0008 31.0 0.9 57 350-409 26-83 (188)
253 1wji_A Tudor domain containing 23.5 68 0.0023 23.1 3.3 23 186-208 25-49 (63)
254 2eow_A Zinc finger protein 347 23.4 34 0.0012 21.5 1.5 15 394-408 11-25 (46)
255 2emg_A Zinc finger protein 484 23.4 34 0.0012 21.5 1.6 15 394-408 11-25 (46)
256 3as5_A MAMA; tetratricopeptide 23.4 2.6E+02 0.009 21.7 11.8 14 192-205 54-67 (186)
257 3ieg_A DNAJ homolog subfamily 23.4 3.8E+02 0.013 23.5 11.8 60 145-206 121-180 (359)
258 2ehe_A Four and A half LIM dom 23.3 54 0.0019 24.1 2.9 60 324-385 10-71 (82)
259 1whc_A RSGI RUH-027, UBA/UBX 3 23.3 73 0.0025 22.9 3.5 25 185-209 24-51 (64)
260 3vtx_A MAMA; tetratricopeptide 23.2 2.9E+02 0.0098 22.1 10.4 96 145-247 74-169 (184)
261 2eq1_A Zinc finger protein 347 23.1 33 0.0011 21.6 1.4 15 394-408 11-25 (46)
262 2cuq_A Four and A half LIM dom 23.1 95 0.0032 22.5 4.2 64 323-389 9-73 (80)
263 2en7_A Zinc finger protein 268 23.1 31 0.0011 21.3 1.3 16 394-409 11-26 (44)
264 2l4z_A DNA endonuclease RBBP8, 23.1 27 0.00091 28.6 1.1 59 330-388 62-121 (123)
265 1x3h_A Leupaxin; paxillin fami 23.0 54 0.0018 23.9 2.8 63 324-389 10-73 (80)
266 1yk4_A Rubredoxin, RD; electro 22.9 17 0.00057 25.5 -0.1 10 395-404 35-44 (52)
267 2ctd_A Zinc finger protein 512 22.8 65 0.0022 24.5 3.4 34 375-408 39-75 (96)
268 2ytf_A Zinc finger protein 268 22.7 35 0.0012 21.4 1.5 15 394-408 11-25 (46)
269 3f6q_B LIM and senescent cell 22.7 26 0.0009 24.9 0.9 58 329-388 11-70 (72)
270 2emb_A Zinc finger protein 473 22.6 35 0.0012 21.2 1.5 15 394-408 11-25 (44)
271 2epc_A Zinc finger protein 32; 22.6 34 0.0012 20.9 1.4 15 394-408 10-24 (42)
272 2yrj_A Zinc finger protein 473 22.6 35 0.0012 21.4 1.5 15 394-408 11-25 (46)
273 2eoj_A Zinc finger protein 268 22.5 30 0.001 21.5 1.1 15 394-408 11-25 (44)
274 4a18_Q RPL36, 60S ribosomal pr 22.4 1.1E+02 0.0036 24.6 4.4 41 222-262 54-99 (104)
275 4ae4_A Ubiquitin-associated pr 22.3 58 0.002 26.6 3.1 21 185-205 91-113 (118)
276 2fbn_A 70 kDa peptidylprolyl i 22.2 3.3E+02 0.011 22.3 9.8 93 148-247 42-150 (198)
277 2yti_A Zinc finger protein 347 22.2 32 0.0011 21.6 1.2 16 394-409 11-26 (46)
278 2lcq_A Putative toxin VAPC6; P 22.1 19 0.00064 30.9 -0.0 23 374-405 136-158 (165)
279 2enh_A Zinc finger protein 28 22.0 42 0.0014 21.1 1.8 16 394-409 11-26 (46)
280 1ubd_C Protein (YY1 zinc finge 21.9 1.2E+02 0.0039 23.4 4.8 40 370-409 61-108 (124)
281 2em4_A Zinc finger protein 28 21.9 35 0.0012 21.5 1.4 15 394-408 11-25 (46)
282 2kn9_A Rubredoxin; metalloprot 21.9 18 0.00061 27.8 -0.2 9 395-403 60-68 (81)
283 2q7f_A YRRB protein; TPR, prot 21.8 3.4E+02 0.012 22.4 10.1 93 147-246 128-220 (243)
284 2ely_A Zinc finger protein 224 21.8 45 0.0015 20.9 1.9 17 394-410 11-27 (46)
285 2en9_A Zinc finger protein 28 21.8 38 0.0013 21.3 1.5 15 394-408 11-25 (46)
286 3nf1_A KLC 1, kinesin light ch 21.6 3.9E+02 0.013 23.0 11.6 103 144-248 27-140 (311)
287 1fv5_A First zinc finger of U- 21.6 32 0.0011 21.6 1.1 16 393-408 6-21 (36)
288 2emj_A Zinc finger protein 28 21.6 37 0.0013 21.4 1.4 15 394-408 11-25 (46)
289 2c2l_A CHIP, carboxy terminus 21.6 4.2E+02 0.014 23.5 9.4 93 148-247 8-100 (281)
290 2eon_A ZFP-95, zinc finger pro 21.5 38 0.0013 21.4 1.5 16 394-409 11-26 (46)
291 4aj5_K Spindle and kinetochore 21.5 3.4E+02 0.012 22.3 8.6 41 87-127 44-84 (123)
292 2dlq_A GLI-kruppel family memb 21.5 1.2E+02 0.0041 23.1 4.8 78 330-408 8-107 (124)
293 1hh8_A P67PHOX, NCF-2, neutrop 21.5 3.3E+02 0.011 22.2 11.9 116 146-264 39-166 (213)
294 2ytp_A Zinc finger protein 484 21.5 38 0.0013 21.3 1.5 15 394-408 11-25 (46)
295 2ep3_A Zinc finger protein 484 21.5 38 0.0013 21.2 1.5 15 394-408 11-25 (46)
296 2eov_A Zinc finger protein 484 21.5 38 0.0013 21.2 1.5 15 394-408 11-25 (46)
297 2eos_A B-cell lymphoma 6 prote 21.5 38 0.0013 20.7 1.5 15 394-408 10-24 (42)
298 2eoy_A Zinc finger protein 473 21.4 42 0.0014 21.1 1.7 16 394-409 11-26 (46)
299 2cur_A Skeletal muscle LIM-pro 21.3 55 0.0019 23.1 2.5 57 330-389 6-63 (69)
300 2kfq_A FP1; protein, de novo p 21.3 23 0.0008 20.5 0.3 13 396-408 3-15 (32)
301 2egq_A FHL1 protein; LIM domai 21.3 38 0.0013 24.6 1.6 63 323-387 9-76 (77)
302 2em6_A Zinc finger protein 224 21.3 40 0.0014 21.2 1.5 15 394-408 11-25 (46)
303 2ep1_A Zinc finger protein 484 21.3 36 0.0012 21.3 1.3 15 394-408 11-25 (46)
304 2eoz_A Zinc finger protein 473 21.2 33 0.0011 21.6 1.1 15 394-408 11-25 (46)
305 2eor_A Zinc finger protein 224 21.1 41 0.0014 21.0 1.5 15 394-408 11-25 (46)
306 2eq3_A Zinc finger protein 347 21.0 33 0.0011 21.5 1.1 15 394-408 11-25 (46)
307 2em3_A Zinc finger protein 28 20.9 39 0.0013 21.2 1.4 15 394-408 11-25 (46)
308 2en3_A ZFP-95, zinc finger pro 20.9 44 0.0015 20.9 1.7 16 394-409 11-26 (46)
309 2ene_A Zinc finger protein 347 20.9 38 0.0013 21.3 1.4 15 394-408 11-25 (46)
310 2yto_A Zinc finger protein 484 20.9 39 0.0013 21.3 1.4 15 394-408 11-25 (46)
311 2eq2_A Zinc finger protein 347 20.9 36 0.0012 21.4 1.3 15 394-408 11-25 (46)
312 2yth_A Zinc finger protein 224 20.9 40 0.0014 21.2 1.5 15 394-408 11-25 (46)
313 1veg_A NEDD8 ultimate buster-1 20.8 72 0.0025 24.5 3.1 25 185-209 44-70 (83)
314 2eme_A Zinc finger protein 473 20.8 40 0.0014 21.1 1.5 15 394-408 11-25 (46)
315 2epw_A Zinc finger protein 268 20.8 45 0.0015 20.8 1.7 16 394-409 11-26 (46)
316 2eox_A Zinc finger protein 473 20.7 40 0.0014 20.9 1.4 16 394-409 11-26 (44)
317 2eml_A Zinc finger protein 28 20.7 39 0.0013 21.2 1.4 17 393-409 10-26 (46)
318 2eop_A Zinc finger protein 268 20.6 43 0.0015 20.9 1.6 15 394-408 11-25 (46)
319 1x63_A Skeletal muscle LIM-pro 20.5 75 0.0026 23.2 3.2 65 323-389 9-75 (82)
320 2eoh_A Zinc finger protein 28 20.5 39 0.0013 21.2 1.4 15 394-408 11-25 (46)
321 2epx_A Zinc finger protein 28 20.5 43 0.0015 21.0 1.6 16 394-409 11-26 (47)
322 1elw_A TPR1-domain of HOP; HOP 20.4 2.4E+02 0.008 20.0 10.8 93 148-247 8-100 (118)
323 1wig_A KIAA1808 protein; LIM d 20.4 50 0.0017 23.9 2.1 58 330-389 6-64 (73)
324 2em2_A Zinc finger protein 28 20.4 41 0.0014 21.1 1.5 15 394-408 11-25 (46)
325 2eou_A Zinc finger protein 473 20.3 41 0.0014 20.9 1.4 15 394-408 11-25 (44)
326 2eoq_A Zinc finger protein 224 20.3 39 0.0013 21.2 1.3 15 394-408 11-25 (46)
327 1na0_A Designed protein CTPR3; 20.3 2.4E+02 0.0083 20.1 10.7 94 146-246 11-104 (125)
328 2emh_A Zinc finger protein 484 20.2 43 0.0015 20.9 1.5 16 394-409 11-26 (46)
329 2emf_A Zinc finger protein 484 20.2 40 0.0014 21.2 1.4 15 394-408 11-25 (46)
330 2em5_A ZFP-95, zinc finger pro 20.2 41 0.0014 21.1 1.4 15 394-408 11-25 (46)
331 2yt9_A Zinc finger-containing 20.2 1E+02 0.0036 22.3 4.0 33 376-408 41-78 (95)
332 2ytn_A Zinc finger protein 347 20.2 44 0.0015 20.9 1.6 16 394-409 11-26 (46)
333 2eom_A ZFP-95, zinc finger pro 20.1 40 0.0014 21.2 1.4 15 394-408 11-25 (46)
334 2ytg_A ZFP-95, zinc finger pro 20.1 48 0.0016 20.7 1.7 16 394-409 11-26 (46)
335 2emz_A ZFP-95, zinc finger pro 20.1 42 0.0014 21.1 1.4 15 394-408 11-25 (46)
No 1
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.88 E-value=9.5e-10 Score=82.15 Aligned_cols=55 Identities=18% Similarity=0.334 Sum_probs=48.9
Q ss_pred eeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 355 KLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 355 ~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
.|+||||++.|.+ ||++ ++||||.+++|++|.+++ + +||.|++....+++.++++
T Consensus 3 ~~~CpIs~~~m~d---PV~~~~sG~~yer~~I~~~l~~~-~--~cP~t~~~L~~~~Lip~~~ 58 (61)
T 2bay_A 3 HMLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDT-G--NDPITNEPLSIEEIVEIVP 58 (61)
T ss_dssp -CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHH-S--BCTTTCCBCCGGGCEECCC
T ss_pred eEEecCCCCCCCC---CEEeCCCCcEEcHHHHHHHHHhC-C--CCcCCcCCCChhhcEECcc
Confidence 4899999999996 8998 999999999999998754 2 5999999999999998875
No 2
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.71 E-value=8.8e-09 Score=81.91 Aligned_cols=55 Identities=20% Similarity=0.146 Sum_probs=48.8
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
...|.|||++++|.+ ||++||||+|++.+|.++... ..+||.|++.+...++...
T Consensus 12 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~---~~~cP~~~~~l~~~~l~pn 66 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTD---PVRLPSGTVMDRSIILRHLLN---SPTDPFNRQMLTESMLEPV 66 (85)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHH---CSBCTTTCCBCCGGGCEEC
T ss_pred chheECcccCchhcC---CeECCCCCEECHHHHHHHHhc---CCCCCCCcCCCChHhcchH
Confidence 467999999999998 999999999999999999864 3689999999998877654
No 3
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.66 E-value=1.5e-08 Score=91.66 Aligned_cols=56 Identities=29% Similarity=0.381 Sum_probs=49.0
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceecc
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAY 414 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvy 414 (416)
+.|+||||+++|.+ ||++||||+|++.+|.++...+ +. .||.|++.+...++..-+
T Consensus 105 ~~f~CPI~~elm~D---PV~~~~Ghtfer~~I~~~l~~~-~~-tcP~t~~~l~~~~L~pN~ 160 (179)
T 2f42_A 105 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRV-GH-FDPVTRSPLTQDQLIPNL 160 (179)
T ss_dssp GGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHT-CS-BCTTTCCBCCGGGCEECH
T ss_pred HhhcccCccccCCC---CeECCCCCEECHHHHHHHHHhC-CC-CCCCCcCCCChhhCcchH
Confidence 67899999999998 9999999999999999998754 33 699999999988876543
No 4
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=2e-08 Score=81.34 Aligned_cols=57 Identities=32% Similarity=0.461 Sum_probs=47.3
Q ss_pred CCeeeecccccccCCCCCceecc-CCccccHHHHHHHHHhC---CCceecCC--CCcc-cCcCCcee
Q 014891 353 HSKLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKN---NGKITCPR--TGLV-CNYSDLVK 412 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp-~G~V~s~~al~~l~~~~---~~~~~CP~--~~~~-~~~~~~~k 412 (416)
...|+|||++++|.+ ||++| |||+|++.+|.++...+ .+.++||. |+.. +...+++.
T Consensus 5 ~~~~~CPI~~~~~~d---PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~p 68 (94)
T 2yu4_A 5 SSGFTCPITKEEMKK---PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQ 68 (94)
T ss_dssp SSCCBCTTTCSBCSS---EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEE
T ss_pred CcEeECcCcCchhcC---CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcC
Confidence 456999999999997 99997 99999999999998753 35789999 7766 77766654
No 5
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.62 E-value=1.6e-08 Score=82.95 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=48.7
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
..-|.|||++++|.+ ||++||||+|++.+|.++... ..+||.|++.+...++...
T Consensus 27 p~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~---~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 27 PDEFRDPLMDTLMTD---PVRLPSGTIMDRSIILRHLLN---SPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp STTTBCTTTCSBCSS---EEEETTTEEEEHHHHHHHTTS---CSBCSSSCCBCCTTSSEEC
T ss_pred cHhhCCcCccCcccC---CeECCCCCEEchHHHHHHHHc---CCCCCCCCCCCChhhceEC
Confidence 467999999999998 999999999999999999752 4799999999998887654
No 6
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.58 E-value=2.7e-08 Score=81.31 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=48.5
Q ss_pred CCeeeecccccccCCCCCceeccCC-ccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNG-YVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G-~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
..-|.|||++++|.+ ||++||| |+|++.+|.++... ..+||.|++.+...++...
T Consensus 20 p~~~~CpI~~~~m~d---PV~~~cG~htf~r~cI~~~l~~---~~~cP~~~~~l~~~~L~pn 75 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLS---DQTDPFNRSPLTMDQIRPN 75 (98)
T ss_dssp CTTTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTT---SCBCTTTCSBCCTTTSEEC
T ss_pred cHhcCCcCccccccC---CeECCCCCeEECHHHHHHHHHh---CCCCCCCCCCCChhhceEc
Confidence 357899999999998 9999999 99999999999753 4689999999998887654
No 7
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.50 E-value=1.2e-07 Score=73.52 Aligned_cols=56 Identities=23% Similarity=0.449 Sum_probs=48.4
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
.+.|.|||..+.|.+ |+++||||+|++.+|.++.+. +..+||.|+..+...++..-
T Consensus 6 ~~~~~C~IC~~~~~~---Pv~~~CgH~fc~~Ci~~~~~~--~~~~CP~C~~~~~~~~l~~n 61 (78)
T 1t1h_A 6 PEYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDA--GHKTCPKSQETLLHAGLTPN 61 (78)
T ss_dssp SSSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTT--TCCBCTTTCCBCSSCCCEEC
T ss_pred cccCCCCCccccccC---CEEcCCCCeecHHHHHHHHHH--CcCCCCCCcCCCChhhCccC
Confidence 467899999999976 999999999999999999853 46899999999988776653
No 8
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=1.6e-07 Score=74.14 Aligned_cols=63 Identities=21% Similarity=0.352 Sum_probs=52.7
Q ss_pred CCCCeeeecccccccCCCC-CceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 351 QHHSKLVCYITKELMDTEN-PPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 351 ~~hS~~~Cpis~~~~~~~N-pP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
.....+.|||..+.+.+.+ .|+++||||+|+..+|.+|.+...+..+||.|.+.+...++..+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~i~~l 74 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 74 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSSTTTS
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchhHHHH
Confidence 3456788999999996544 59999999999999999998876667999999999988776554
No 9
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.32 E-value=2.3e-07 Score=68.64 Aligned_cols=57 Identities=21% Similarity=0.264 Sum_probs=47.8
Q ss_pred eeecccccccCC----CCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 356 LVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 356 ~~Cpis~~~~~~----~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
+.|||-.+.+.+ ...++++||||+|....+.+|.+. ...||.|...+..+++.++||
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~~~~l 64 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKINHKRYHPIYI 64 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH---CSBCTTTCCBCTTTCEEECCC
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc---CCCCCCCCccCCccceeeeeC
Confidence 457777776643 356788999999999999999875 359999999999999999996
No 10
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=3.3e-07 Score=69.89 Aligned_cols=57 Identities=14% Similarity=0.385 Sum_probs=48.3
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 411 (416)
....+.|||-.+.+.+ |+++||||+|...+|.++.+..++..+||.|...+..++++
T Consensus 17 ~~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~r 73 (73)
T 2ysl_A 17 LQEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNAIR 73 (73)
T ss_dssp CCCCCBCTTTCSBCSS---EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCCCC
T ss_pred CccCCEeccCCcccCC---eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcccCC
Confidence 3456889999998875 89999999999999999976445678999999999888763
No 11
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.32 E-value=2.4e-07 Score=88.34 Aligned_cols=54 Identities=28% Similarity=0.348 Sum_probs=46.9
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
+.|.|||+++.|.+ ||++||||+|++.+|.++...++ ..||.|++.+...++..
T Consensus 207 ~~~~c~i~~~~~~d---Pv~~~~gh~f~~~~i~~~~~~~~--~~cP~~~~~~~~~~l~~ 260 (281)
T 2c2l_A 207 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVG--HFNPVTRSPLTQEQLIP 260 (281)
T ss_dssp STTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHTC--SSCTTTCCCCCGGGCEE
T ss_pred cccCCcCcCCHhcC---CeECCCCCEECHHHHHHHHHHCC--CCCcCCCCCCchhcCcc
Confidence 67899999999998 99999999999999999986543 23999999998877654
No 12
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.28 E-value=3.2e-07 Score=69.46 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=48.3
Q ss_pred CeeeecccccccCC----CCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 354 SKLVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 354 S~~~Cpis~~~~~~----~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
..+.|||-.+.+.+ ...++.+||||+|....|.+|.++. ..||.|...+..++++++||
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~~~~l 71 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 71 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC---SBCTTTCCBCCCCSCCCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC---CCCCCCCCccChhheeeccC
Confidence 34566666666643 3556889999999999999998754 59999999999999999996
No 13
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.23 E-value=1.3e-06 Score=68.10 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=49.9
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhC---CCceecCCCCcccCcCCceeccc
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKN---NGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~---~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
...+.|||..+.+.+ |+++||||+|+..+|.++.... ++...||.|...+...++++-+.
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~~ 79 (85)
T 2ecw_A 17 KEEVTCPICLELLKE---PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNLKPNLH 79 (85)
T ss_dssp CTTTSCTTTCSCCSS---CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCCEECSC
T ss_pred ccCCCCcCCChhhCc---ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhCCcCHH
Confidence 455789999888765 8999999999999999998763 35789999999999888876543
No 14
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=1e-06 Score=68.74 Aligned_cols=60 Identities=22% Similarity=0.390 Sum_probs=49.9
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHh---CCCceecCCCCcccCcCCceecc
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKK---NNGKITCPRTGLVCNYSDLVKAY 414 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~---~~~~~~CP~~~~~~~~~~~~kvy 414 (416)
....+.|||..+.+.+ |+++||||+|+..++.++... .++...||.|...+...++.+-+
T Consensus 16 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~~~n~ 78 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQ---PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNR 78 (85)
T ss_dssp CCCCCCCTTTCSCCSS---CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSCCCSC
T ss_pred ccCCCCCCCCCcccCC---ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhcCccH
Confidence 3456889999988865 899999999999999998765 35678999999999988876654
No 15
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.19 E-value=1.3e-06 Score=65.25 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=46.2
Q ss_pred eeeccccc-ccCC-CCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 356 LVCYITKE-LMDT-ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 356 ~~Cpis~~-~~~~-~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
+.|||..+ .+.+ .-+++++||||+|....|.++..+ +...||.|+..+...+++.++|
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~~~~~~~~~~~ 63 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR--GAGNCPECGTPLRKSNFRVQLF 63 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT--TSSSCTTTCCCCSSCCCEEECC
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc--CCCcCCCCCCccccccceeecc
Confidence 46777777 5543 333467999999999999999653 3579999999999999998876
No 16
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.16 E-value=5.1e-07 Score=69.82 Aligned_cols=60 Identities=23% Similarity=0.427 Sum_probs=49.3
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhC----CCceecCCCCcccCcCCceecc
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKN----NGKITCPRTGLVCNYSDLVKAY 414 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~----~~~~~CP~~~~~~~~~~~~kvy 414 (416)
....+.|||..+.+.+ |+++||||+|+..+|.++.+.. .+...||.|...+...++++-+
T Consensus 9 ~~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~ 72 (79)
T 2egp_A 9 VQEEVTCPICLELLTE---PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQ 72 (79)
T ss_dssp CCCCCEETTTTEECSS---CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGGTCS
T ss_pred cccCCCCcCCCcccCC---eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCCcCH
Confidence 4567899999999865 8999999999999999886532 3478999999999988776544
No 17
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.14 E-value=1.2e-06 Score=72.40 Aligned_cols=57 Identities=18% Similarity=0.282 Sum_probs=47.7
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
..+.|||..+.+.+ |+++||||+|+..+|.++.....+...||.|...+...++...
T Consensus 20 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~~~~ 76 (112)
T 1jm7_A 20 KILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQES 76 (112)
T ss_dssp HHTSCSSSCCCCSS---CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCC
T ss_pred CCCCCcccChhhcC---eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhcCcc
Confidence 34678888887754 8889999999999999998766667899999999998877654
No 18
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.13 E-value=2.8e-06 Score=62.85 Aligned_cols=48 Identities=17% Similarity=0.494 Sum_probs=41.0
Q ss_pred CCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCC
Q 014891 351 QHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRT 401 (416)
Q Consensus 351 ~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~ 401 (416)
.....+.|||-.+.+.+ |+++||||+|....|.++.+..++..+||.|
T Consensus 16 ~~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 16 KLQEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCBCTTTCSBCSS---CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred hCccCCCCCcCCchhCC---eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 34566889999988875 8999999999999999998766667899997
No 19
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.11 E-value=3.4e-06 Score=63.09 Aligned_cols=54 Identities=9% Similarity=0.162 Sum_probs=45.6
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 410 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 410 (416)
....+.|||-.+.+.+ |+++||||+|...+|.++.+ .+..+||.|...+..+++
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCS---PKQTECGHRFCESCMAALLS--SSSPKCTACQESIVKDKV 65 (66)
T ss_dssp CCCCEECTTTCCEESS---CCCCSSSCCCCHHHHHHHHT--TSSCCCTTTCCCCCTTTC
T ss_pred CCcCCCCCCCChHhcC---eeECCCCCHHHHHHHHHHHH--hCcCCCCCCCcCCChhhc
Confidence 3567899999999865 88899999999999999974 346799999999987764
No 20
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.07 E-value=4e-06 Score=66.82 Aligned_cols=55 Identities=24% Similarity=0.467 Sum_probs=45.5
Q ss_pred CCeeeecccccccCCCCCceecc-CCccccHHHHHHHHHhCCCceecCCCCccc-CcCCce
Q 014891 353 HSKLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVC-NYSDLV 411 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp-~G~V~s~~al~~l~~~~~~~~~CP~~~~~~-~~~~~~ 411 (416)
...|.|||..+.+.+ |+++| |||+|++.+|.++.... +...||.|...+ ...++.
T Consensus 11 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~-~~~~CP~Cr~~~~~~~~~~ 67 (92)
T 3ztg_A 11 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLES-DEHTCPTCHQNDVSPDALI 67 (92)
T ss_dssp CTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHHC-TTCCCTTTCCSSCCTTSCE
T ss_pred CcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHhc-CCCcCcCCCCcCCCccccC
Confidence 456899999999985 99999 99999999999987643 458999999997 444443
No 21
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.03 E-value=1.9e-06 Score=81.79 Aligned_cols=57 Identities=19% Similarity=0.378 Sum_probs=48.7
Q ss_pred CCCeeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCC--CCcccCcCCcee
Q 014891 352 HHSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPR--TGLVCNYSDLVK 412 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~--~~~~~~~~~~~k 412 (416)
..--|.|||+++.|.+ ||.. .|||+|++.+|.++.+. ++...||. |.+.+...+++.
T Consensus 178 ~~~el~CPIcl~~f~D---PVts~~CGHsFcR~cI~~~~~~-~~~~~CPvtGCr~~l~~~dL~p 237 (267)
T 3htk_C 178 GKIELTCPITCKPYEA---PLISRKCNHVFDRDGIQNYLQG-YTTRDCPQAACSQVVSMRDFVR 237 (267)
T ss_dssp SBCCSBCTTTSSBCSS---EEEESSSCCEEEHHHHHHHSTT-CSCEECSGGGCSCEECGGGEEE
T ss_pred CceeeECcCccCcccC---CeeeCCCCCcccHHHHHHHHHh-CCCCCCCcccccCcCchhhCCc
Confidence 4667899999999988 9985 99999999999998753 46789999 999998887653
No 22
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.97 E-value=6.3e-06 Score=67.09 Aligned_cols=58 Identities=12% Similarity=0.242 Sum_probs=49.0
Q ss_pred CCeeeecccccccCCCCCcee-ccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 353 HSKLVCYITKELMDTENPPQV-LPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~-lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
...+.|||-.+.+.+ |+. ++|||+|+..+|.++.+... ..||.|...+..+++.+.++
T Consensus 20 ~~~~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~~--~~CP~Cr~~~~~~~l~~~~~ 78 (100)
T 3lrq_A 20 AEVFRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQR--AQCPHCRAPLQLRELVNCRW 78 (100)
T ss_dssp HHHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHTC--SBCTTTCCBCCGGGCEECTT
T ss_pred CCCCCCccCCccccC---ccccCCCCChhhHHHHHHHHHHCc--CCCCCCCCcCCHHHhHhhHH
Confidence 455789999988875 888 99999999999999987542 79999999999998887653
No 23
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.93 E-value=6.9e-06 Score=69.31 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=40.0
Q ss_pred eeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 355 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 355 ~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
-+.|||..+.+.+ |+.+||||+|+..+|.++.. .+...||.|...+..
T Consensus 52 ~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELVFR---PITTVCQHNVCKDCLDRSFR--AQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHH--TTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHHcC---cEEeeCCCcccHHHHHHHHh--HCcCCCCCCCccCCC
Confidence 4567777777764 89999999999999999976 345799999999976
No 24
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.93 E-value=5.1e-06 Score=63.70 Aligned_cols=53 Identities=25% Similarity=0.459 Sum_probs=44.1
Q ss_pred CCeeeecccccccCCCCCceecc-CCccccHHHHHHHHHhCCCceecCCCCcccCcCC
Q 014891 353 HSKLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp-~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 409 (416)
...+.|||-.+.+.+ |+++| |||+|.+.+|.++.+.. +...||.|...+...+
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~-~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 13 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLES-DEHTCPTCHQNDVSPD 66 (74)
T ss_dssp CGGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHS-SSSCCSSSCCSSCCTT
T ss_pred CCCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhc-CCCcCCCCCCcCCCcc
Confidence 456889999998875 89999 99999999999998754 3679999999865443
No 25
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.93 E-value=6.9e-06 Score=69.30 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=63.2
Q ss_pred CCCCCCCchhhhcccCCCCCCCCCCCeeeecccccccCC----CCCceeccCCccccHHHHHHHHHhCCCceecCCCCcc
Q 014891 329 TKEDPLSQESFRKLASPLPYSKQHHSKLVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLV 404 (416)
Q Consensus 329 ~~~~P~c~~~~~~l~~~LP~~~~~hS~~~Cpis~~~~~~----~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~ 404 (416)
+..||+|...+..-. +......-..+.|+|-.+.+.+ ...++.++|||+|....+.+|.+.. ..||.|...
T Consensus 48 ~~~CP~Cr~~~~~~~--l~~l~i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~ 122 (133)
T 4ap4_A 48 ANTCPTCRKKINHKR--YHPIYIGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKK 122 (133)
T ss_dssp CSBCTTTCCBCTTTC--EEECBCSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC---SBCTTTCCB
T ss_pred CCCCCCCCCcCcccc--ccccccCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC---CCCCCCCCc
Confidence 457999988664321 1112233567889999988854 3456889999999999999998754 599999999
Q ss_pred cCcCCceeccc
Q 014891 405 CNYSDLVKAYI 415 (416)
Q Consensus 405 ~~~~~~~kvyi 415 (416)
+..+++.++||
T Consensus 123 ~~~~~~~~~~~ 133 (133)
T 4ap4_A 123 INHKRYHPIYI 133 (133)
T ss_dssp CCGGGEEEECC
T ss_pred CChhcceeeeC
Confidence 99999999996
No 26
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.86 E-value=9.3e-06 Score=58.10 Aligned_cols=49 Identities=27% Similarity=0.351 Sum_probs=40.3
Q ss_pred eeeeccccccc-CCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 355 KLVCYITKELM-DTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 355 ~~~Cpis~~~~-~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
...|||-.+.+ +.+++++++||||+|....|.+|.+.+ ..||.|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 54 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG---YRCPLCSGPSS 54 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT---CCCTTSCCSSC
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC---CcCCCCCCcCC
Confidence 35677877777 456788999999999999999998754 78999988764
No 27
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=1.4e-05 Score=60.78 Aligned_cols=55 Identities=11% Similarity=0.216 Sum_probs=46.0
Q ss_pred CCCeeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 352 HHSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
....+.|||-.+.+.+ |+++ ||||+|....|.++.+. ...||.|...+...+...
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~~ 67 (72)
T 2djb_A 12 LTPYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY---SNRCPKCNIVVHQTQPLS 67 (72)
T ss_dssp CCGGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH---CSSCTTTCCCCCSSCSCC
T ss_pred cCCCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc---CCcCCCcCcccCcccccc
Confidence 3467899999988876 7886 99999999999999865 469999999998877643
No 28
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.81 E-value=1.9e-05 Score=66.07 Aligned_cols=59 Identities=15% Similarity=0.208 Sum_probs=49.2
Q ss_pred CCCCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 349 SKQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 349 ~~~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
.......+.|||..+.+.+ |+.+||||+|+..+|.++.+.++ .+||.|...+..+++.+
T Consensus 12 ~~~~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~--~~CP~Cr~~~~~~~~~~ 70 (118)
T 3hct_A 12 DPPLESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDAG--HKCPVDNEILLENQLFP 70 (118)
T ss_dssp SSCCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHHC--SBCTTTCCBCCGGGCEE
T ss_pred ccCCCCCCCCCcCChhhcC---eEECCcCChhhHHHHHHHHhhCC--CCCCCCCCCcCHHhccc
Confidence 3456677999999999875 89999999999999999976542 39999999998877654
No 29
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.81 E-value=1.4e-05 Score=57.68 Aligned_cols=47 Identities=13% Similarity=0.333 Sum_probs=38.7
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCC
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRT 401 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~ 401 (416)
....+.|||-.+.+.+ |+++||||+|....|.++.....+...||.|
T Consensus 12 ~~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKE---PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSS---CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cccCCCCccCCcccCc---cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3456789999888865 7899999999999999996543467899987
No 30
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.80 E-value=4.2e-05 Score=57.41 Aligned_cols=52 Identities=13% Similarity=0.259 Sum_probs=43.8
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
.....|+|-.+.+....+++.+||||+|...+|.+|.+.+ ..||.|...+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN---KKCPICRVDIEA 63 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC---SBCTTTCSBSCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC---CCCcCcCccccC
Confidence 3456799998888877889999999999999999998764 369999988764
No 31
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.78 E-value=1.6e-05 Score=61.82 Aligned_cols=47 Identities=13% Similarity=0.206 Sum_probs=40.7
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
..+.|||..+.+.+ |+++||||+|+..+|.+|.+. ...||.|...+.
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQN---PVVTKCRHYFCESCALEHFRA---TPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCS---EEECTTSCEEEHHHHHHHHHH---CSBCSSSCCBCC
T ss_pred CCCCCcCCCchhcC---eeEccCCCHhHHHHHHHHHHC---CCcCCCcCcccc
Confidence 45789999888855 899999999999999999864 468999999986
No 32
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.77 E-value=1.8e-05 Score=69.27 Aligned_cols=49 Identities=16% Similarity=0.197 Sum_probs=41.6
Q ss_pred eeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcC
Q 014891 355 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 355 ~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 408 (416)
.+.|||..+.+.+ |+.+||||+|+..+|.++... +.+.||.|...+...
T Consensus 78 ~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 78 SFMCVCCQELVYQ---PVTTECFHNVCKDCLQRSFKA--QVFSCPACRHDLGQN 126 (150)
T ss_dssp HTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHT--TCCBCTTTCCBCCTT
T ss_pred CCEeecCChhhcC---CEEcCCCCchhHHHHHHHHHh--CCCcCCCCCccCCCC
Confidence 4678888887765 899999999999999999864 457999999999876
No 33
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.76 E-value=1.9e-05 Score=63.78 Aligned_cols=55 Identities=18% Similarity=0.314 Sum_probs=46.0
Q ss_pred CCeeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 353 HSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
...+.|||..+.+.+ |+++ ||||+|+..+|.++... ...||.|...+...++.+-
T Consensus 20 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~l~~n 75 (99)
T 2y43_A 20 DDLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLSY---KTQCPTCCVTVTEPDLKNN 75 (99)
T ss_dssp HHHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTT---CCBCTTTCCBCCGGGCEEC
T ss_pred CCCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHHC---CCCCCCCCCcCChhhCCcC
Confidence 356789999999876 8887 99999999999999753 4699999999988776653
No 34
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.76 E-value=1.2e-05 Score=69.22 Aligned_cols=45 Identities=22% Similarity=0.322 Sum_probs=35.9
Q ss_pred eecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 357 VCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 357 ~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
.|||..+.+.+ |+++||||+|+..+|.+|... ...||.|...+..
T Consensus 55 ~C~iC~~~~~~---~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 55 QCIICSEYFIE---AVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKS 99 (138)
T ss_dssp BCTTTCSBCSS---EEEETTSCEEEHHHHHHHTTT---CSBCTTTCCBCCC
T ss_pred CCcccCcccCC---ceECCCCCCccHHHHHHHHHc---CCcCCCCCCcCCC
Confidence 46666666644 899999999999999999643 4689999988753
No 35
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.73 E-value=6.6e-06 Score=62.43 Aligned_cols=53 Identities=15% Similarity=0.065 Sum_probs=43.1
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
..+.|+|-.+.+.+ |+.+||||+|...+|.+|... ...||.|...+...++.+
T Consensus 14 ~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~~~~~ 66 (71)
T 2d8t_A 14 TVPECAICLQTCVH---PVSLPCKHVFCYLCVKGASWL---GKRCALCRQEIPEDFLDS 66 (71)
T ss_dssp SCCBCSSSSSBCSS---EEEETTTEEEEHHHHHHCTTC---SSBCSSSCCBCCHHHHSC
T ss_pred CCCCCccCCcccCC---CEEccCCCHHHHHHHHHHHHC---CCcCcCcCchhCHhhccC
Confidence 45678888887754 899999999999999998643 369999999998776554
No 36
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.71 E-value=1.6e-05 Score=61.31 Aligned_cols=57 Identities=16% Similarity=0.202 Sum_probs=47.7
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 411 (416)
....+.|+|..+.+.....++.+||||+|...+|.+|.+.. ..||.|...+...+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~~~ 68 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH---DSCPVCRKSLTGQNTA 68 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT---CSCTTTCCCCCCSCSC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC---CcCcCcCCccCCcccC
Confidence 44567899999999877778889999999999999997533 6899999999877654
No 37
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.67 E-value=3e-05 Score=64.49 Aligned_cols=55 Identities=16% Similarity=0.279 Sum_probs=46.7
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
...+.|||..+.+.+ |+.+||||+|+..+|.++.+.. ...||.|...+...++.+
T Consensus 21 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~~ 75 (116)
T 1rmd_A 21 VKSISCQICEHILAD---PVETSCKHLFCRICILRCLKVM--GSYCPSCRYPCFPTDLES 75 (116)
T ss_dssp HHHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHT--CSBCTTTCCBCCGGGCBC
T ss_pred cCCCCCCCCCcHhcC---cEEcCCCCcccHHHHHHHHhHC--cCcCCCCCCCCCHhhccc
Confidence 456889999999875 8999999999999999998653 358999999998877654
No 38
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.64 E-value=3.6e-05 Score=63.23 Aligned_cols=49 Identities=8% Similarity=0.198 Sum_probs=41.8
Q ss_pred CeeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCCCCcccCcC
Q 014891 354 SKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 408 (416)
.-+.|||..+.+.+ |+.+ ||||+|+..+|.++.+. ...||.|...+...
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLET---SKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTS---CSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHh---CCcCcCCCcccccc
Confidence 45789999988865 8887 99999999999999753 37999999998765
No 39
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.63 E-value=3.9e-05 Score=61.20 Aligned_cols=52 Identities=15% Similarity=0.168 Sum_probs=44.1
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
..-..|+|-.+.+...+.++.+||||+|...+|.+|.+.+ ..||.|...+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~---~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKS---GTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTT---CBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcC---CcCcCcCccCCC
Confidence 3457899999999888889999999999999999998543 489999988753
No 40
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.56 E-value=3.7e-05 Score=64.71 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=48.5
Q ss_pred CeeeecccccccCC----CCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 354 SKLVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 354 S~~~Cpis~~~~~~----~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
..+.|||-.+.+.+ ...++.+||||+|....|.++.+.. ..||.|.+.+...++.++|+
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~---~~CP~Cr~~~~~~~l~~l~i 68 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA---NTCPTCRKKINHKRYHPIYI 68 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC---SBCTTTCCBCTTTCEEECBC
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC---CCCCCCCCcCcccccccccc
Confidence 45778888887754 2345899999999999999997543 49999999999999988876
No 41
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.52 E-value=6.9e-05 Score=66.25 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=43.1
Q ss_pred CCCeeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 352 HHSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
....+.|||..+.+.+ |+.+ ||||+|+..+|.+|.+. +...||.|...+..
T Consensus 51 ~~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 51 LHSELMCPICLDMLKN---TMTTKECLHRFCADCIITALRS--GNKECPTCRKKLVS 102 (165)
T ss_dssp CHHHHBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHHT--TCCBCTTTCCBCCS
T ss_pred CCCCCCCcccChHhhC---cCEeCCCCChhHHHHHHHHHHh--CcCCCCCCCCcCCC
Confidence 4567899999999876 7776 99999999999999863 35789999999854
No 42
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.52 E-value=6e-05 Score=56.20 Aligned_cols=51 Identities=20% Similarity=0.258 Sum_probs=39.6
Q ss_pred CCeeeecccccccCC----CCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 353 HSKLVCYITKELMDT----ENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 353 hS~~~Cpis~~~~~~----~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
...+.|||-.+.+.+ .+.++++||||+|....|.+|.+. ...||.|...+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH---CSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc---CCCCCCCCCccC
Confidence 345667777776643 345688999999999999999875 358999998875
No 43
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=5.1e-05 Score=58.01 Aligned_cols=53 Identities=21% Similarity=0.316 Sum_probs=44.5
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcC
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 408 (416)
.....|+|-.+.+...+..+.+||||+|...+|.+|.+.+ ..||.|...+..+
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~---~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN---RTCPICRADSGPS 73 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHC---SSCTTTCCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcC---CcCcCcCCcCCCC
Confidence 4557899999998777777889999999999999998754 4899999887654
No 44
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.50 E-value=2.7e-05 Score=64.65 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=41.8
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
..-|.|||..+.+.+ |+++||||+|+..+|.++.. .+...||.|...+..
T Consensus 13 ~~~~~C~iC~~~~~~---p~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVE---PVTLPCNHTLCKPCFQSTVE--KASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSS---CEECTTSCEECHHHHCCCCC--TTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCc---eeEcCCCCHHhHHHHHHHHh--HCcCCCCCCCcccCc
Confidence 445889999988875 99999999999999998863 346899999998763
No 45
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.47 E-value=0.00011 Score=55.80 Aligned_cols=49 Identities=14% Similarity=0.242 Sum_probs=40.8
Q ss_pred eeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 355 KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 355 ~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
...|+|-.+.+......+++||||+|...+|.+|.+.. ..||.|...+.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~---~~CP~Cr~~~~ 63 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR---KVCPLCNMPVL 63 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC---SBCTTTCCBCS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC---CcCCCcCcccc
Confidence 45788888888776777778999999999999998754 38999998875
No 46
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.45 E-value=4.9e-05 Score=54.29 Aligned_cols=49 Identities=16% Similarity=0.333 Sum_probs=40.8
Q ss_pred eeeecccccccCCCCCceecc-CCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 355 KLVCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 355 ~~~Cpis~~~~~~~NpP~~lp-~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
...|+|-.+.+.+...++.+| |||+|....|.+|.+. ...||.|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~---~~~CP~Cr~~~~ 54 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS---HSTCPLCRLTVV 54 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT---CCSCSSSCCCSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc---CCcCcCCCCEeE
Confidence 457888888887777888898 9999999999999753 458999998764
No 47
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.42 E-value=5.1e-05 Score=58.20 Aligned_cols=51 Identities=20% Similarity=0.208 Sum_probs=40.6
Q ss_pred CeeeecccccccCCCCCceeccCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceecccC
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 416 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 416 (416)
..+.|+|-.+...+ |+.+||||+ ++...+.++ .+||.|...+. ...+||++
T Consensus 23 ~~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~--~~~~i~~S 74 (74)
T 4ic3_A 23 EEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV-------DKCPMCYTVIT--FKQKILMS 74 (74)
T ss_dssp HHTBCTTTSSSBCC---EEEETTCCBCCCHHHHTTC-------SBCTTTCCBCS--EEEECBC-
T ss_pred cCCCCCCCCCCCCC---EEEcCCCChhHHHHhhhcC-------ccCCCcCcCcc--CcEEEeeC
Confidence 34578887776654 899999999 999999876 69999999875 56888875
No 48
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.40 E-value=2.1e-05 Score=65.68 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=43.4
Q ss_pred CCeeeecccccccCCCCCceec-cCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 353 HSKLVCYITKELMDTENPPQVL-PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~l-p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
...+.|||..+.+.+ |+++ ||||+|+..+|.++.. ..||.|...+...+++.
T Consensus 20 ~~~~~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~-----~~CP~Cr~~~~~~~~~~ 72 (117)
T 1jm7_B 20 EKLLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG-----TGCPVCYTPAWIQDLKI 72 (117)
T ss_dssp HHTTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT-----TBCSSSCCBCSCSSCCC
T ss_pred hhCCCCCCCChHhhC---ccEeCCCCCHHHHHHHHHHhc-----CCCcCCCCcCccccccc
Confidence 356789999888865 8988 9999999999998853 68999999998776654
No 49
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.39 E-value=9.3e-05 Score=65.69 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=49.0
Q ss_pred CCCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 350 KQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 350 ~~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
......|.|||..+.+.+ |+.+||||+|.+..|.++.+.+ ..+||.|...+..+++.+.
T Consensus 13 ~~~~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~--~~~CP~Cr~~~~~~~~~~~ 71 (170)
T 3hcs_A 13 PPLESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDA--GHKCPVDNEILLENQLFPD 71 (170)
T ss_dssp SCCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHH--CSBCTTTCCBCCGGGCEEC
T ss_pred cCCCCCCCCCCCChhhcC---cEECCCCCHHHHHHHHHHHHhC--CCCCCCCccCcchhhhhhh
Confidence 345678999999999976 8999999999999999997643 2499999999988776543
No 50
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=97.36 E-value=9.8e-05 Score=55.09 Aligned_cols=46 Identities=22% Similarity=0.246 Sum_probs=36.5
Q ss_pred eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 356 LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
..|||-.+.+. +|++.+||||+|...++.+|.+.+ ..||.|...+.
T Consensus 6 ~~C~IC~~~~~--~~~~~~~C~H~fc~~Ci~~~~~~~---~~CP~Cr~~~~ 51 (68)
T 1chc_A 6 ERCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQN---PTCPLCKVPVE 51 (68)
T ss_dssp CCCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHHS---CSTTTTCCCCC
T ss_pred CCCeeCCcccc--CCcEecCCCCeeHHHHHHHHHhCc---CcCcCCChhhH
Confidence 35666666553 567899999999999999998654 58999998875
No 51
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.35 E-value=8.9e-05 Score=56.88 Aligned_cols=51 Identities=20% Similarity=0.241 Sum_probs=40.2
Q ss_pred CeeeecccccccCCCCCceeccCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceecccC
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 416 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 416 (416)
..+.|+|-.+...+ |+.+||||+ |+...+.++ .+||.|...+. ...+||++
T Consensus 24 ~~~~C~IC~~~~~~---~~~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~--~~~~i~~S 75 (75)
T 2ecg_A 24 EEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV-------DKCPMCYTVIT--FKQKIFMS 75 (75)
T ss_dssp HHHSCSSSCSSCCC---BCCSSSCCCCBCHHHHHHC-------SBCTTTCCBCC--CCCBCCCC
T ss_pred CCCCCCcCCCCCCC---EEEecCCCHHHHHHHhhCC-------CCCccCCceec--CcEEEecC
Confidence 34578888776544 899999999 999999643 68999999874 46788875
No 52
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.25 E-value=3.9e-05 Score=55.58 Aligned_cols=47 Identities=19% Similarity=0.280 Sum_probs=38.0
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCC
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 409 (416)
..+.|+|-.+.+.+ |+++||||+|....+.+ ....||.|...+...+
T Consensus 5 ~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~------~~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 5 QFLRCQQCQAEAKC---PKLLPCLHTLCSGCLEA------SGMQCPICQAPWPLGA 51 (56)
T ss_dssp CCSSCSSSCSSCBC---CSCSTTSCCSBTTTCSS------SSSSCSSCCSSSSCCS
T ss_pred cCCCceEeCCccCC---eEEcCCCCcccHHHHcc------CCCCCCcCCcEeecCC
Confidence 34678888877764 89999999999999865 3579999999987653
No 53
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.23 E-value=0.00034 Score=54.36 Aligned_cols=56 Identities=14% Similarity=0.272 Sum_probs=42.3
Q ss_pred CCeeeecccccccCCCCCceecc--CCccccHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 014891 353 HSKLVCYITKELMDTENPPQVLP--NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp--~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 411 (416)
..-+.|||-.+.++..+ +..+| |||.|++.++.++.. .+...||.|.+.+....+.
T Consensus 9 ~~~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~--~~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRT--DENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTT--SSCSBCTTTCCBCSSCSSC
T ss_pred ccCCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHh--cCCCCCCCCCCccCCCchh
Confidence 34577888888776533 34444 999999999999853 3568999999999876653
No 54
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.16 E-value=0.00017 Score=56.21 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=40.5
Q ss_pred eecccccccCCCCCceecc-CCccccHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 014891 357 VCYITKELMDTENPPQVLP-NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 357 ~Cpis~~~~~~~NpP~~lp-~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 411 (416)
.|||-.+....+.-++++| |||+|....|.++.+.+ ..||.|...+...++.
T Consensus 28 ~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~---~~CP~CR~~~~~~~~g 80 (81)
T 2ecl_A 28 ACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN---NRCPLCQQDWVVQRIG 80 (81)
T ss_dssp CCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC---CBCTTTCCBCCEEEEE
T ss_pred cCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC---CCCCCcCCCcchhhcC
Confidence 3777777766666677765 99999999999997643 4999999998876543
No 55
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.14 E-value=0.00041 Score=57.17 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=30.0
Q ss_pred eccCCccccHHHHHHHHHhC--CCceecCCCCcccCcC
Q 014891 373 VLPNGYVYSTKALEEMAKKN--NGKITCPRTGLVCNYS 408 (416)
Q Consensus 373 ~lp~G~V~s~~al~~l~~~~--~~~~~CP~~~~~~~~~ 408 (416)
.+||||+|...+|.+|...+ .....||.|...|...
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 68999999999999998643 3467999999988643
No 56
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.12 E-value=7.6e-05 Score=56.11 Aligned_cols=53 Identities=15% Similarity=0.263 Sum_probs=42.3
Q ss_pred CCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 353 HSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 353 hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
...+.|||-.+.+.+ +.+||||+|....+.+|.+ ....||.|...+...+..-
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~---~~~~CP~Cr~~~~~~~~~~ 65 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSD---RHRNCPICRLQMTGANESS 65 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSC---CCSSCHHHHHCTTCCCCCC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHH---CcCcCCCcCCcccCCCccc
Confidence 456778888887765 8899999999999999864 4679999999887665443
No 57
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=96.96 E-value=0.0002 Score=62.04 Aligned_cols=51 Identities=16% Similarity=0.266 Sum_probs=42.9
Q ss_pred CCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 351 QHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 351 ~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
.....|.|||..+.+.+ |+.++|||+|++.+|.++.+. +..+||.|.....
T Consensus 27 ~l~~~~~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~--~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRR---PFQAQCGHRYCSFCLASILSS--GPQNCAACVHEGI 77 (141)
T ss_dssp GCCGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHGGG--SCEECHHHHHTTC
T ss_pred cCCcCcCCCCCChhhcC---cEECCCCCccCHHHHHHHHhc--CCCCCCCCCCccc
Confidence 34677899999999976 899999999999999999753 3579999988654
No 58
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=96.95 E-value=0.00059 Score=50.56 Aligned_cols=52 Identities=13% Similarity=0.296 Sum_probs=38.9
Q ss_pred eecccccccCCCCCceec--cCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceecccC
Q 014891 357 VCYITKELMDTENPPQVL--PNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 416 (416)
Q Consensus 357 ~Cpis~~~~~~~NpP~~l--p~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 416 (416)
.|+|-.+...+ ++++ ||||+ +....+.++.+.+ .+||.|.+.+ .++.+||++
T Consensus 9 ~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~---~~CPiCR~~i--~~~i~i~~s 63 (63)
T 2vje_B 9 PCSLCEKRPRD---GNIIHGRTGHLVTCFHCARRLKKAG---ASCPICKKEI--QLVIKVFIA 63 (63)
T ss_dssp BCTTTSSSBSC---EEEEETTEEEEEECHHHHHHHHHTT---CBCTTTCCBC--CEEEEEEEC
T ss_pred CCcccCCcCCC---eEEEecCCCCHhHHHHHHHHHHHhC---CcCCCcCchh--hceEEEecC
Confidence 45555543322 5566 99998 9999999997542 5899999987 578898874
No 59
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.85 E-value=0.00053 Score=68.80 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=42.9
Q ss_pred eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 356 LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
..|+|..+.+.+ |+.+||||+|+..++.+|... +...||.|...+...+...
T Consensus 333 ~~C~ICle~~~~---pv~lpCGH~FC~~Ci~~wl~~--~~~~CP~CR~~i~~~~~i~ 384 (389)
T 2y1n_A 333 QLCKICAENDKD---VKIEPCGHLMCTSCLTSWQES--EGQGCPFCRCEIKGTEPIV 384 (389)
T ss_dssp SBCTTTSSSBCC---EEEETTCCEECHHHHHHHHHH--TCSBCTTTCCBCCEEEECS
T ss_pred CCCCccCcCCCC---eEEeCCCChhhHHHHHHHHhc--CCCCCCCCCCccCCceeEe
Confidence 689999887754 899999999999999999763 3468999999988765543
No 60
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=96.83 E-value=0.00084 Score=49.86 Aligned_cols=52 Identities=15% Similarity=0.277 Sum_probs=38.3
Q ss_pred eecccccccCCCCCceec--cCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceecccC
Q 014891 357 VCYITKELMDTENPPQVL--PNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 416 (416)
Q Consensus 357 ~Cpis~~~~~~~NpP~~l--p~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 416 (416)
.|+|-.+...+ ++.+ ||||+ +....+.++.+. ..+||.|...+ .++.++|++
T Consensus 10 ~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~---~~~CPiCR~~i--~~~i~i~~~ 64 (64)
T 2vje_A 10 PCVICQGRPKN---GCIVHGKTGHLMACFTCAKKLKKR---NKPCPVCRQPI--QMIVLTYFP 64 (64)
T ss_dssp CCTTTSSSCSC---EEEEETTEEEEEECHHHHHHHHHT---TCCCTTTCCCC--CEEEEEECC
T ss_pred CCCcCCCCCCC---EEEECCCCCChhhHHHHHHHHHHc---CCcCCCcCcch--hceEeeecC
Confidence 45555543322 5655 99999 799999999753 24899999987 578999974
No 61
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=96.80 E-value=0.00076 Score=74.37 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=46.4
Q ss_pred CeeeecccccccCCCCCceeccCC-ccccHHHHHHHHHhCCCceecCCCCcccCcCCcee
Q 014891 354 SKLVCYITKELMDTENPPQVLPNG-YVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G-~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~k 412 (416)
.-|.||||++.|.+ ||++|.| +.|.+.+|++|...+ -+||.|++....+++..
T Consensus 890 ~~F~cPIs~~lM~D---PVilpsG~~TydR~~I~~wl~~~---~tdP~Tr~~L~~~~liP 943 (968)
T 3m62_A 890 DEFLDPLMYTIMKD---PVILPASKMNIDRSTIKAHLLSD---STDPFNRMPLKLEDVTP 943 (968)
T ss_dssp GGGBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTTC---CBCTTTCCBCCGGGCEE
T ss_pred HHhCCcchhhHHhC---CeEcCCCCEEECHHHHHHHHhcC---CCCCCCCCCCCcccccc
Confidence 67999999999999 9999998 689999999998642 38999999998877654
No 62
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.61 E-value=0.00037 Score=55.66 Aligned_cols=59 Identities=12% Similarity=0.184 Sum_probs=41.3
Q ss_pred CeeeecccccccCCCCCceeccCCccccHHHHHHHHHh---CC--CceecCC--CCcc--cCcCCcee
Q 014891 354 SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKK---NN--GKITCPR--TGLV--CNYSDLVK 412 (416)
Q Consensus 354 S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~---~~--~~~~CP~--~~~~--~~~~~~~k 412 (416)
..+.|||-.+.+...+...+.+|||+|++.+|.+.... .+ ..++||. |+.. +..+++++
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ 71 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIEC 71 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHH
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHH
Confidence 35678888877765332222489999999999987653 12 3589999 9998 66655543
No 63
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=96.56 E-value=0.0013 Score=54.02 Aligned_cols=41 Identities=10% Similarity=0.128 Sum_probs=32.9
Q ss_pred CCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 014891 367 TENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 410 (416)
Q Consensus 367 ~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 410 (416)
++.+.+.+||||+|-..+|.+|.+. ...||.|...|.+.+.
T Consensus 64 ~~~~~~~~~C~H~FH~~Ci~~Wl~~---~~~CP~Cr~~~~~~~~ 104 (106)
T 3dpl_R 64 EECTVAWGVCNHAFHFHCISRWLKT---RQVCPLDNREWEFQKY 104 (106)
T ss_dssp -CCCEEEETTSCEEEHHHHHHHHTT---CSBCSSSCSBCCEEEC
T ss_pred ccceEeecccCcEECHHHHHHHHHc---CCcCcCCCCcceeecC
Confidence 4455677999999999999999854 4689999999876543
No 64
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=96.22 E-value=0.0018 Score=50.22 Aligned_cols=48 Identities=15% Similarity=0.315 Sum_probs=36.4
Q ss_pred eeecccccccCCCCCceeccCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 356 LVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
..|+|-.+...+ |+.+||||+ ++...+.++ ..||.|...+.. ..++|+
T Consensus 19 ~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~-------~~CP~Cr~~i~~--~~~i~~ 67 (79)
T 2yho_A 19 MLCMVCCEEEIN---STFCPCGHTVCCESCAAQL-------QSCPVCRSRVEH--VQHVYL 67 (79)
T ss_dssp TBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC-------SBCTTTCCBCCE--EEECBC
T ss_pred CEeEEeCcccCc---EEEECCCCHHHHHHHHHhc-------CcCCCCCchhhC--eEEEEe
Confidence 356666554433 889999999 999999766 399999998764 567765
No 65
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=96.11 E-value=0.001 Score=65.89 Aligned_cols=49 Identities=14% Similarity=0.315 Sum_probs=38.1
Q ss_pred eeecccccccCCCCCceeccCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceecccC
Q 014891 356 LVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYIS 416 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi~ 416 (416)
+.|||..+...+ |+.+||||+ ++..++.++ ..||.|...+. ...+||++
T Consensus 296 ~~C~IC~~~~~~---~v~lpCgH~~fC~~C~~~~-------~~CP~CR~~i~--~~~~i~~s 345 (345)
T 3t6p_A 296 RTCKVCMDKEVS---VVFIPCGHLVVCQECAPSL-------RKCPICRGIIK--GTVRTFLS 345 (345)
T ss_dssp CBCTTTSSSBCC---EEEETTCCEEECTTTGGGC-------SBCTTTCCBCC--EEEECC--
T ss_pred CCCCccCCcCCc---eEEcCCCChhHhHHHHhcC-------CcCCCCCCCcc--CeEEeecC
Confidence 567777666654 899999999 999999876 58999999875 56788764
No 66
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.10 E-value=0.0025 Score=49.61 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=41.5
Q ss_pred eeecccccccCCCCCceeccCC-----ccccHHHHHHHHHhCCCceecCCCCcccCcCC
Q 014891 356 LVCYITKELMDTENPPQVLPNG-----YVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G-----~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 409 (416)
-.|+|-.+..++++ ++++||+ |.|-.++|++|...+ +...||.|...|....
T Consensus 16 ~~C~IC~~~~~~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~-~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 16 DICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSS-DTRCCELCKYEFIMET 72 (80)
T ss_dssp CCCSSSCCCCCSSS-CEECSSSCCSSSCCEETTHHHHHHHHH-CCSBCSSSCCBCCCCC
T ss_pred CCCeEcCccccCCC-eeEeccccCCcCCeeCHHHHHHHHhhC-CCCCCCCCCCeeecCc
Confidence 46777777766666 4789996 999999999998753 4579999999998765
No 67
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=95.55 E-value=0.0022 Score=53.74 Aligned_cols=39 Identities=8% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCc
Q 014891 369 NPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDL 410 (416)
Q Consensus 369 NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~ 410 (416)
-+.+.+||||+|...+|.+|.+. ...||.|...|.+...
T Consensus 77 ~~v~~~~C~H~FH~~CI~~Wl~~---~~~CP~Cr~~~~~~k~ 115 (117)
T 4a0k_B 77 CTVAWGVCNHAFHFHCISRWLKT---RQVCPLDNREWEFQKY 115 (117)
T ss_dssp ------------------------------------------
T ss_pred cccccCCcCceEcHHHHHHHHHc---CCcCCCCCCeeeeecc
Confidence 34455799999999999999764 4689999999876654
No 68
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.34 E-value=0.0073 Score=45.32 Aligned_cols=48 Identities=10% Similarity=0.040 Sum_probs=35.2
Q ss_pred eeecccccccCCCCCceeccCCcc-ccHHHHHHHHHhCCCceecCCCCcccCcCCceeccc
Q 014891 356 LVCYITKELMDTENPPQVLPNGYV-YSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKAYI 415 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G~V-~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kvyi 415 (416)
..|+|-.+... .++.+||||+ +....+..+ .+||+|...+.. ..+||.
T Consensus 16 ~~C~IC~~~~~---~~v~~pCgH~~~C~~C~~~~-------~~CP~CR~~i~~--~~~i~~ 64 (68)
T 2ea5_A 16 KDCVVCQNGTV---NWVLLPCRHTCLCDGCVKYF-------QQCPMCRQFVQE--SFALSG 64 (68)
T ss_dssp SCCSSSSSSCC---CCEETTTTBCCSCTTHHHHC-------SSCTTTCCCCCC--EECCCS
T ss_pred CCCCCcCcCCC---CEEEECCCChhhhHHHHhcC-------CCCCCCCcchhc--eEEeec
Confidence 45777655443 3888999999 999999743 589999986653 566653
No 69
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.23 E-value=0.073 Score=52.81 Aligned_cols=52 Identities=15% Similarity=0.207 Sum_probs=45.0
Q ss_pred eeecccccccCCCCCcee-ccCCcc--ccHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 014891 356 LVCYITKELMDTENPPQV-LPNGYV--YSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~-lp~G~V--~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 411 (416)
|.||+|+..|.- |+. ..|-|+ |...++.++..+ .+..+||.|++.+..+++.
T Consensus 250 L~CPlS~~ri~~---PvRg~~C~HlQCFDl~sfL~~~~~-~~~W~CPIC~k~~~~~dL~ 304 (371)
T 3i2d_A 250 LQCPISYTRMKY---PSKSINCKHLQCFDALWFLHSQLQ-IPTWQCPVCQIDIALENLA 304 (371)
T ss_dssp SBCTTTSSBCSS---EEEETTCCSSCCEEHHHHHHHHHH-SCCCBCTTTCCBCCGGGEE
T ss_pred ecCCCccccccc---cCcCCcCCCcceECHHHHHHHhhc-CCceeCCCCCcccCHHHee
Confidence 799999999977 888 789998 999999998754 5789999999999887764
No 70
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=92.03 E-value=0.13 Score=50.78 Aligned_cols=53 Identities=19% Similarity=0.355 Sum_probs=45.5
Q ss_pred eeeecccccccCCCCCcee-ccCCcc--ccHHHHHHHHHhCCCceecCCCCcccCcCCce
Q 014891 355 KLVCYITKELMDTENPPQV-LPNGYV--YSTKALEEMAKKNNGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 355 ~~~Cpis~~~~~~~NpP~~-lp~G~V--~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~ 411 (416)
.+.||+|+..|.- |+. ..|-|+ |...++.++..+ .+..+||.|++.+..+++.
T Consensus 215 SL~CPlS~~ri~~---P~Rg~~C~HlqCFDl~sfL~~~~~-~~~W~CPiC~k~~~~~dL~ 270 (360)
T 4fo9_A 215 SLMCPLGKMRLTI---PCRAVTCTHLQCFDAALYLQMNEK-KPTWICPVCDKKAAYESLI 270 (360)
T ss_dssp ESBCTTTCSBCSS---EEEETTCCCCCCEEHHHHHHHHHH-SCCCBCTTTCSBCCGGGEE
T ss_pred eeeCCCccceecc---CCcCCCCCCCccCCHHHHHHHHhh-CCCeECCCCCcccCHHHeE
Confidence 3789999999976 887 789998 999999999764 4688999999999887764
No 71
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=92.02 E-value=0.16 Score=40.07 Aligned_cols=36 Identities=14% Similarity=0.282 Sum_probs=31.9
Q ss_pred hccHHHHHHHHHHHHHHcChHHHHHHHHHHhCCCCc
Q 014891 140 EWNNTRVKRILVDYMLRMSYYETAEKLAESSNIQDL 175 (416)
Q Consensus 140 ~w~~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~~~ 175 (416)
...+..|++.|++||..+||.+++.+|.+|.+++..
T Consensus 7 ~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~ 42 (88)
T 1uuj_A 7 QRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMN 42 (88)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCC
Confidence 445679999999999999999999999999988743
No 72
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=91.72 E-value=0.0094 Score=46.00 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=31.9
Q ss_pred CCCCCeeeecccccccCCC---CCceeccCCccccHHHHHHHHHhCCCceecCCCCccc-----CcCCceecc
Q 014891 350 KQHHSKLVCYITKELMDTE---NPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVC-----NYSDLVKAY 414 (416)
Q Consensus 350 ~~~hS~~~Cpis~~~~~~~---NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~-----~~~~~~kvy 414 (416)
||.|-.--|||.|+.++=. +.-+.+.|+.-+=++.=.=|..-.+=.|+||.||++| +.+++.|||
T Consensus 3 ~~~~~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~~Lp~~EaeKVF 75 (95)
T 2k5c_A 3 HHHHHMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGKTLPRREAEKVF 75 (95)
T ss_dssp -----CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETTSSCTTTHHHHH
T ss_pred ccccccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcccCChHHHHHHH
Confidence 4556667788888877521 1111133433222221111211123469999999998 456666665
No 73
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=90.83 E-value=0.16 Score=37.06 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=36.0
Q ss_pred eeecccccccCCCCCceeccCCc-----cccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 356 LVCYITKELMDTENPPQVLPNGY-----VYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 356 ~~Cpis~~~~~~~NpP~~lp~G~-----V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
-.|+|-.+.. ++|+++||.+ .+-+..|.+|.... +...||.|+..|..
T Consensus 7 ~~CrIC~~~~---~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~-~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 7 PVCWICNEEL---GNERFRACGCTGELENVHRSCLSTWLTIS-RNTACQICGVVYNT 59 (60)
T ss_dssp CEETTTTEEC---SCCCCCSCCCSSGGGSCCHHHHHHHHHHH-TCSBCTTTCCBCCC
T ss_pred CEeEEeecCC---CCceecCcCCCCchhhhHHHHHHHHHHhC-CCCccCCCCCeeec
Confidence 3677776652 2367899764 89999999997643 35799999999875
No 74
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=88.27 E-value=1 Score=39.20 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=54.1
Q ss_pred HHHHHHHhhhhhhhhccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhccccccccHHHHHHHHHHhc
Q 014891 198 PALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLA 265 (416)
Q Consensus 198 ~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~ei~~lm~lLa 265 (416)
.-..|+...-...+.-=+.+-|=+.+.-|++||..|...+|-.|..++-+-+...|.++|+++.+..-
T Consensus 33 ~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~~i~~L~~i~~ 100 (156)
T 2nxp_A 33 GLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTK 100 (156)
T ss_dssp HHHHHHHTSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCGGGHHHHHHHHTCCS
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHhHHHHHHHHHHHhcCCC
Confidence 34567776643333333678999999999999999999999999999888888888999999877543
No 75
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=87.06 E-value=0.029 Score=38.72 Aligned_cols=27 Identities=15% Similarity=0.282 Sum_probs=21.5
Q ss_pred eccCCccccHHHHHHHHHhCCCceecCCCCcc
Q 014891 373 VLPNGYVYSTKALEEMAKKNNGKITCPRTGLV 404 (416)
Q Consensus 373 ~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~ 404 (416)
.+-||++++..-|+.| ..++|||||-.
T Consensus 6 C~rCg~~fs~~el~~l-----P~IrCpyCGyr 32 (48)
T 4ayb_P 6 CGKCWKTFTDEQLKVL-----PGVRCPYCGYK 32 (48)
T ss_dssp CCCTTTTCCCCCSCCC-----SSSCCTTTCCS
T ss_pred eeccCCCccHHHHhhC-----CCcccCccCcE
Confidence 3789999998877666 35899999964
No 76
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=85.46 E-value=8.2 Score=38.05 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=33.0
Q ss_pred HHHHHHhhhHHHHHhHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Q 014891 55 YKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLE 131 (416)
Q Consensus 55 l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~ 131 (416)
|+...-...+.|.+-+..|...+.++.++.. ++-..+..+.+.+..-.+...+.-+.-.++.+.+..|+.+|+
T Consensus 54 Lqg~Ldk~er~~~~rIe~L~~~L~~~s~s~~----~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk 126 (390)
T 1deq_A 54 MKGLIDEVDQDFTSRINKLRDSLFNYQKNSK----DSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILR 126 (390)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 3444444445666666666666666655311 111222222222222222222222222355666677777776
No 77
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=85.45 E-value=0.64 Score=37.41 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=27.7
Q ss_pred ceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 371 PQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 371 P~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
.-|+||+||++.++...+.+++ .-.||.|...+.
T Consensus 15 gRmIPCkHvFCydCa~~~~~~~--~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 15 GRMIPCKHVFCYDCAILHEKKG--DKMCPGCSDPVQ 48 (101)
T ss_dssp EEEETTCCEEEHHHHHHHHHTT--CCBCTTTCCBCS
T ss_pred eeeccccccHHHHHHHHHHhcc--CCCCcCcCCeee
Confidence 4579999999999999997643 358999988764
No 78
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=83.09 E-value=0.89 Score=39.25 Aligned_cols=65 Identities=15% Similarity=0.265 Sum_probs=49.7
Q ss_pred HHHHHHHhhhhhhhhccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhccccccccHHHHHHHHHH
Q 014891 198 PALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMAT 263 (416)
Q Consensus 198 ~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~ei~~lm~l 263 (416)
.-..|+...-...+.-=+.|.|=+.+.-|++||..| ..+|-.|..++-+-+...|.++|+++.+.
T Consensus 16 ~Lr~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f~~~~~~~~~~~i~~L~~i 80 (148)
T 2j49_A 16 MLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFKDFHGSEINRLFSV 80 (148)
T ss_dssp HHHHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGHHHHHHHHHTTTTC
T ss_pred HHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHhHHhHHHHHHHHHHHhcC
Confidence 345677765332222226789999999999999999 99999999988887777777888877663
No 79
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.46 E-value=0.33 Score=35.66 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=37.8
Q ss_pred CCCCCCchhhhcccCCCCCCCCCC---------CeeeecccccccCCCCCceeccCC
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHH---------SKLVCYITKELMDTENPPQVLPNG 377 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~h---------S~~~Cpis~~~~~~~NpP~~lp~G 377 (416)
..||+|...+.. +-+|-.|.|| ....||+-+..+...+..+++|.|
T Consensus 16 ~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~~G 70 (70)
T 2ecn_A 16 EECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANESSGPSSG 70 (70)
T ss_dssp CCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCCCCCCCC
T ss_pred CCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCccccCCCC
Confidence 469999888766 6678888776 356799999999999988888887
No 80
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=80.93 E-value=3.5 Score=34.95 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=49.1
Q ss_pred HHHHHHHHhhhhhhhhccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhccccccccHHHHHHHHHH
Q 014891 197 APALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMAT 263 (416)
Q Consensus 197 ~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~ei~~lm~l 263 (416)
..-..|++..-...+.-=+.+.|=+.+.-|++||..|...+|-.|..++-+-+... .++|+++.+.
T Consensus 13 ~~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~-~~~i~~L~~i 78 (138)
T 2j4b_A 13 VSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNK-SEEIKQFESI 78 (138)
T ss_dssp HHHHHHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--C-HHHHHHHTTC
T ss_pred HHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhH-HHHHHHHhcC
Confidence 34456887763333333367899999999999999999999999999887777766 7778877653
No 81
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=78.55 E-value=2.3 Score=33.55 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHHHHHcChHHHHHHHHHHhCCCC
Q 014891 142 NNTRVKRILVDYMLRMSYYETAEKLAESSNIQD 174 (416)
Q Consensus 142 ~~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~~ 174 (416)
...++|.+|--||...||..+|-+|.+|+++..
T Consensus 4 tsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~ 36 (90)
T 2xtc_A 4 TSDEVNFLVYRYLQESGFSHSAFTFGIESHISQ 36 (90)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGG
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCc
Confidence 467999999999999999999999999998864
No 82
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.88 E-value=1.3 Score=33.52 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=28.0
Q ss_pred cCCccccHHHHHHHHHhCCCceecCCCCcccCcCC
Q 014891 375 PNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 375 p~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 409 (416)
.|||.|-..+|.+|.+.. +.-+||.|...+...+
T Consensus 33 ~C~h~fH~~Ci~kWl~~~-~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 33 TCGIRMHLPCVAKYFQSN-AEPRCPHCNDYWPHEI 66 (74)
T ss_dssp SSCCEECHHHHHHHSTTC-SSCCCTTTCSCCCSCC
T ss_pred CCCchhhHHHHHHHHHhc-CCCCCCCCcCcCCCCC
Confidence 899999999999998543 3479999999887543
No 83
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=74.49 E-value=1.1 Score=33.45 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=27.9
Q ss_pred CCCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 350 KQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 350 ~~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
...-.+++||+++....-+. ..+...||.|+..|...|=..|
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~----------------------~~g~LvC~~c~~~YPI~dGIPv 46 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE----------------------SEQLLVNERLNLAYRIDDGIPV 46 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HHHHHHhCCCCCCCcCeEeC----------------------CCCEEEcCCCCccccCCCCEee
Confidence 34557888888887543211 2367888888888887765554
No 84
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=73.94 E-value=0.87 Score=34.08 Aligned_cols=40 Identities=18% Similarity=0.281 Sum_probs=26.8
Q ss_pred CCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 352 HHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 352 ~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
.-.+++||+++....-+. ..+...||.|+..|...|-..|
T Consensus 5 LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dGIPv 44 (68)
T 2hf1_A 5 FLEILVCPLCKGPLVFDK----------------------SKDELICKGDRLAFPIKDGIPM 44 (68)
T ss_dssp CEEECBCTTTCCBCEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HhhheECCCCCCcCeEeC----------------------CCCEEEcCCCCcEecCCCCeee
Confidence 446788888886443211 1367889999988887776554
No 85
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=73.33 E-value=1.3 Score=33.09 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=14.4
Q ss_pred CceecCCCCcccCcCCceec
Q 014891 394 GKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~~~kv 413 (416)
+...||.|+..|...|-..|
T Consensus 25 ~~LiC~~cg~~YPI~dGIPv 44 (68)
T 2jr6_A 25 QELWSRQAKLAYPIKDGIPY 44 (68)
T ss_dssp TEEEETTTTEEEEEETTEEC
T ss_pred CEEEcCCCCcEecCCCCeee
Confidence 56788888888877665544
No 86
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=72.22 E-value=0.96 Score=34.02 Aligned_cols=41 Identities=20% Similarity=0.305 Sum_probs=27.6
Q ss_pred CCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCCceec
Q 014891 351 QHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 351 ~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~~~kv 413 (416)
..-.+++||+++....-+. ..+...||.|+..|...|-..|
T Consensus 4 ~LL~iL~CP~ck~~L~~~~----------------------~~~~LiC~~cg~~YPI~dGIPv 44 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR----------------------AQAELVCNADRLAFPVRDGVPI 44 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET----------------------TTTEEEETTTTEEEEEETTEEC
T ss_pred HHhhheECCCCCCcCEEeC----------------------CCCEEEcCCCCceecCCCCeee
Confidence 3456888998887543211 1367889999998887766554
No 87
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=69.24 E-value=1.4 Score=33.06 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=14.4
Q ss_pred CceecCCCCcccCcCCceec
Q 014891 394 GKITCPRTGLVCNYSDLVKA 413 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~~~kv 413 (416)
+...||.|+..|...|-..|
T Consensus 25 ~~LiC~~cg~~YPI~dGIPv 44 (69)
T 2pk7_A 25 TELISKGAGLAYPIRDGIPV 44 (69)
T ss_dssp SEEEETTTTEEEEEETTEEC
T ss_pred CEEEcCCCCcEecCcCCeee
Confidence 56788888888877665544
No 88
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=63.55 E-value=1.6 Score=32.46 Aligned_cols=19 Identities=16% Similarity=0.247 Sum_probs=15.6
Q ss_pred CCceecCCCCcccCcCCce
Q 014891 393 NGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 393 ~~~~~CP~~~~~~~~~~~~ 411 (416)
.+.+.||||+..|......
T Consensus 38 ~g~~~CpYCg~~f~l~~~~ 56 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLKGSK 56 (67)
T ss_dssp TSEEEETTTTEEEEETTSG
T ss_pred CCeEECCCCCCEEEECCCc
Confidence 5789999999999876543
No 89
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=62.79 E-value=9.1 Score=26.81 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=27.8
Q ss_pred cccccc-ccHHHHHHHHHhhhHHHHHhHHHHHHH
Q 014891 44 EHQFLR-VPFEHYKKTIRTNHRAVEKEITSVISN 76 (416)
Q Consensus 44 e~~~~~-vP~E~l~k~fr~~qk~ieke~~~v~~~ 76 (416)
|+.||+ ++||.|.++..+.+..+|+|+..+-..
T Consensus 3 df~fLk~ls~eEL~~rl~~Ld~~Me~Ei~elr~R 36 (51)
T 2jo8_A 3 DYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQK 36 (51)
T ss_dssp CCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHhCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 456676 899999999999999999999887543
No 90
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=61.84 E-value=4.8 Score=33.06 Aligned_cols=76 Identities=8% Similarity=-0.025 Sum_probs=51.8
Q ss_pred CCCCCCchhhhccc-CCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 330 KEDPLSQESFRKLA-SPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 330 ~~~P~c~~~~~~l~-~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
..|..|...+..-. +.. ....+|.. |.|..-++.+++.+.++..-.|.+|.+..-.++.. ...+|..|++....
T Consensus 3 ~~C~~C~~~I~~~~~~~a-~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~---~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 3 LTCGGCQQNIGDRYFLKA-IDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG---QDGLCASCDKRIRA 78 (131)
T ss_dssp CBBTTTCCBCCSSEEEEE-TTEEEETTTCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHC---CCEECTTTCCEECT
T ss_pred ccCcCCCCEeCCcEEEEE-CCCcccHHHcccCcCCCccccCCCeEEEECCEEeecCchhhhCC---CccChhhcCCccCc
Confidence 34666655543211 111 12455655 99999999998666678889999999999988742 23489999998765
Q ss_pred CC
Q 014891 408 SD 409 (416)
Q Consensus 408 ~~ 409 (416)
.+
T Consensus 79 ~e 80 (131)
T 2xjy_A 79 YE 80 (131)
T ss_dssp TS
T ss_pred cc
Confidence 43
No 91
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=60.56 E-value=31 Score=23.59 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Q 014891 91 AVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLE 131 (416)
Q Consensus 91 ~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~ 131 (416)
+.++++.|-..|+.|+-++.....+-......++.||..|.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666667777777887777777777888889988774
No 92
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=59.92 E-value=52 Score=24.67 Aligned_cols=92 Identities=14% Similarity=0.045 Sum_probs=54.7
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~f 226 (416)
..++..+.+.|.++.|..+.++. .+. ..+.+.+..+..+ .+..|+++.|+.++..--.. ...+... +...-
T Consensus 20 ~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~--~~~~~~~~~A~~~~~~a~~~-~~~~~~~----~~~la 91 (133)
T 2lni_A 20 KNKGNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNRAAC--YTKLLEFQLALKDCEECIQL-EPTFIKG----YTRKA 91 (133)
T ss_dssp HHHHHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHHHHH--HTTTTCHHHHHHHHHHHHHH-CTTCHHH----HHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHH--HHHhccHHHHHHHHHHHHHh-CCCchHH----HHHHH
Confidence 45677778888888777765543 332 2244444333333 34579999999998765332 1111222 22222
Q ss_pred HHHHhcCChHHHHHHHHHhcc
Q 014891 227 IELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 227 IELir~~~~~eAi~yar~~l~ 247 (416)
.-+.+.|+..+|+.+.++-+.
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHH
Confidence 334567899999999887553
No 93
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=59.57 E-value=4.3 Score=28.51 Aligned_cols=39 Identities=5% Similarity=0.049 Sum_probs=25.3
Q ss_pred cee-ccCCccccHHHHHHHHHhCCCceecCCCCcccCcCC
Q 014891 371 PQV-LPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 371 P~~-lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 409 (416)
|+. --||..|+...-....-.+...++|++|++.|...+
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~ 53 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDE 53 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECT
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCc
Confidence 444 448888877654432112345699999999997654
No 94
>1xou_B Z5138 gene product; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.2
Probab=59.01 E-value=40 Score=25.40 Aligned_cols=69 Identities=22% Similarity=0.280 Sum_probs=39.9
Q ss_pred HHHHHHHHhhhHHHHH---hHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 014891 53 EHYKKTIRTNHRAVEK---EITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNH 129 (416)
Q Consensus 53 E~l~k~fr~~qk~iek---e~~~v~~~~~~l~~~~~~~~~~~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~ 129 (416)
|+|-|+.|+--..|.+ |++-|...++.+......+ -++.++|+.+|+- ....+|.++++..-..|+.
T Consensus 11 elldkkirseie~ikkiiaefdvvke~v~~l~ekakt~-pqaae~ln~lieg---------yt~geerklydsalskiek 80 (95)
T 1xou_B 11 ELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEKAKTD-PQAAEKLNKLIEG---------YTYGEERKLYDSALSKIEK 80 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHH---------HHHSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHh---------hcchhHHHHHHHHHHHHHH
Confidence 5666777765444433 6666666666665421222 2455677777765 2345666667766666666
Q ss_pred hh
Q 014891 130 LE 131 (416)
Q Consensus 130 L~ 131 (416)
|-
T Consensus 81 li 82 (95)
T 1xou_B 81 LI 82 (95)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 95
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=58.37 E-value=3.1 Score=32.45 Aligned_cols=19 Identities=16% Similarity=0.420 Sum_probs=15.7
Q ss_pred CCceecCCCCcccCcCCce
Q 014891 393 NGKITCPRTGLVCNYSDLV 411 (416)
Q Consensus 393 ~~~~~CP~~~~~~~~~~~~ 411 (416)
.+...||||+..|....-.
T Consensus 46 ~g~~~CpYCg~~y~~~~~~ 64 (87)
T 2jz8_A 46 TDEKICPYCSTLYRYDPSL 64 (87)
T ss_dssp CCEECCTTTCCEEECCTTS
T ss_pred CCeEECCCCCCEeEcCCCC
Confidence 5789999999999876543
No 96
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=58.31 E-value=3.7 Score=29.36 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=26.0
Q ss_pred CCCCCeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecC--CCCcccCcCCceec
Q 014891 350 KQHHSKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCP--RTGLVCNYSDLVKA 413 (416)
Q Consensus 350 ~~~hS~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP--~~~~~~~~~~~~kv 413 (416)
...-.+++||+++....-+. +...|+ .|+..|...|=..|
T Consensus 5 ~~lL~iL~CP~c~~~L~~~~------------------------~~L~C~~~~c~~~YPI~dGIPv 46 (56)
T 2kpi_A 5 AGLLEILACPACHAPLEERD------------------------AELICTGQDCGLAYPVRDGIPV 46 (56)
T ss_dssp CSCTTSCCCSSSCSCEEEET------------------------TEEEECSSSCCCEEEEETTEEC
T ss_pred HHHHhheeCCCCCCcceecC------------------------CEEEcCCcCCCcEEeeECCEee
Confidence 45667888888887443211 467788 88888877665443
No 97
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=58.20 E-value=3.2 Score=31.93 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=14.1
Q ss_pred CCceecCCCCcccCcCC
Q 014891 393 NGKITCPRTGLVCNYSD 409 (416)
Q Consensus 393 ~~~~~CP~~~~~~~~~~ 409 (416)
++.+.||||+..|....
T Consensus 51 ~g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 51 TGFVECGYCDRRYIHES 67 (80)
T ss_dssp TCEEECSSSSCEEEEHH
T ss_pred CCeEECCCCCCEEEecC
Confidence 57899999999997654
No 98
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=58.01 E-value=50 Score=31.04 Aligned_cols=31 Identities=13% Similarity=0.059 Sum_probs=15.5
Q ss_pred hHHHHhHHHHHHHHHhcCChHHHHHHHHHhc
Q 014891 216 KFEFQLRLQEFIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 216 ~LeF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (416)
.+.+..+...-+-....|+..+|+.+.++-+
T Consensus 98 ~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al 128 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKEYVEAIGYYREAE 128 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 3444444444444455555566655555443
No 99
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=55.54 E-value=3.6 Score=40.46 Aligned_cols=34 Identities=18% Similarity=-0.021 Sum_probs=26.6
Q ss_pred ccCCccccHHHHHHHHHhCC--------CceecCCCCcccCc
Q 014891 374 LPNGYVYSTKALEEMAKKNN--------GKITCPRTGLVCNY 407 (416)
Q Consensus 374 lp~G~V~s~~al~~l~~~~~--------~~~~CP~~~~~~~~ 407 (416)
.+|||-|-..+|.+|.+... -.-.||||....+.
T Consensus 332 ~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 332 AKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp TTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred CccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 58999999999999986421 13589999987653
No 100
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=55.26 E-value=66 Score=24.39 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=30.9
Q ss_pred cccccHHHHHH---HHHhhhHHHHHhHHHHHHHHHHhhh
Q 014891 47 FLRVPFEHYKK---TIRTNHRAVEKEITSVISNVADVSD 82 (416)
Q Consensus 47 ~~~vP~E~l~k---~fr~~qk~ieke~~~v~~~~~~l~~ 82 (416)
.++|.||.|+. .|+.....|+..+..+.+.+..|..
T Consensus 5 ~i~V~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~ 43 (98)
T 3gwk_C 5 QIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDE 43 (98)
T ss_dssp HBCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 47899999886 7888888999999999999888866
No 101
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=55.05 E-value=56 Score=23.50 Aligned_cols=94 Identities=7% Similarity=-0.037 Sum_probs=54.1
Q ss_pred HHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHH
Q 014891 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFI 227 (416)
Q Consensus 149 lI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fI 227 (416)
.++..+.+.|.++.|....+.. .+. ..+.+.+..+..+ ....|+++.|+.++..--.. .........+...-.
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKA--LYNLERYEEAVDCYNYVINV---IEDEYNKDVWAAKAD 84 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHT---SCCTTCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHH--HHHccCHHHHHHHHHHHHHh---CcccchHHHHHHHHH
Confidence 4566677888887777665433 221 1233333333322 34579999999998765322 111111223333344
Q ss_pred HHHhc-CChHHHHHHHHHhccc
Q 014891 228 ELVRG-ENNLRAITYARKYLAP 248 (416)
Q Consensus 228 ELir~-~~~~eAi~yar~~l~~ 248 (416)
-+.+. |+..+|+.+.++-+..
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHhCCHHHHHHHHHHHhhc
Confidence 45678 8999999999876543
No 102
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=53.31 E-value=15 Score=25.91 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=25.0
Q ss_pred Cceecc---CCccccHHHHH-HHHH--hCCCceecCCCCcccCcCC
Q 014891 370 PPQVLP---NGYVYSTKALE-EMAK--KNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 370 pP~~lp---~G~V~s~~al~-~l~~--~~~~~~~CP~~~~~~~~~~ 409 (416)
.|+.=+ ||..|....-. +=.+ .+...+.|++|++.|....
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~ 63 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHH
Confidence 345543 88888665432 2111 2445699999999997543
No 103
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=53.02 E-value=36 Score=25.66 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Q 014891 90 DAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLE 131 (416)
Q Consensus 90 ~~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~ 131 (416)
++..+++.|-..|+.|+-|+.....+-......++.||..|.
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE 45 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVE 45 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677777777778888877777778888888988875
No 104
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=52.71 E-value=1.3e+02 Score=30.93 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=22.0
Q ss_pred CCCCcccHHHHHHHHHHHHHHhcCChHH
Q 014891 171 NIQDLVDIEVFQEAKKVIDALQNKEVAP 198 (416)
Q Consensus 171 gi~~~~d~~~f~~~~~I~~~L~~gdl~~ 198 (416)
.++-.+|++.|+..++-.+.+..-|+.|
T Consensus 168 ~~~~~vd~~sY~~~QKQLeQv~a~dL~p 195 (562)
T 3ghg_A 168 ALAREVDLKDYEDQQKQLEQVIAKDLLP 195 (562)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred hheeecchHHHHHHHHHHHHHhhcccCC
Confidence 3556678999999988888888777766
No 105
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=51.31 E-value=51 Score=28.67 Aligned_cols=51 Identities=16% Similarity=0.050 Sum_probs=23.4
Q ss_pred hcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 192 QNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 192 ~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
..|+.+.|++++...-.. ..... ..+..--.-+...|+..+|+.+.++-+.
T Consensus 86 ~~~~~~~A~~~~~~a~~~-~~~~~----~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 86 KKGQDSLAIQQYQAAVDR-DTTRL----DMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HTTCHHHHHHHHHHHHHH-STTCT----HHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HcccHHHHHHHHHHHHhc-CcccH----HHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 356666666666544221 11111 1222222233445666666666665543
No 106
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=48.81 E-value=25 Score=20.50 Aligned_cols=22 Identities=36% Similarity=0.599 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 014891 89 DDAVNHLTSLVSRLQGLKRKLE 110 (416)
Q Consensus 89 ~~~~~~l~~li~kl~~lkrkl~ 110 (416)
++.-+.|+.+.++++.|++|+.
T Consensus 4 delykeledlqerlrklrkklr 25 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 4556778889999999998874
No 107
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=48.75 E-value=16 Score=33.70 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=27.2
Q ss_pred CCccccHHHHHHHHHhCCCceecCCCCcccCcC
Q 014891 376 NGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 376 ~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 408 (416)
||+.+-..++.++.+ ..+..+||.|+..+...
T Consensus 199 C~~~~H~~C~~~~~~-~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 199 CGIRMHLPCVAKYFQ-SNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp SCCEECHHHHHHHTT-TCSSCBCTTTCCBCCSC
T ss_pred cChHHHHHHHHHHHH-hCCCCCCCCCCCCCCCC
Confidence 999999999999975 34567999999998765
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=46.83 E-value=4.1 Score=39.64 Aligned_cols=32 Identities=16% Similarity=0.378 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHHHcChHHHHHHHHHHhCCC
Q 014891 142 NNTRVKRILVDYMLRMSYYETAEKLAESSNIQ 173 (416)
Q Consensus 142 ~~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~ 173 (416)
.+.+++|+|++||..+||.+++..|.+|.+++
T Consensus 7 q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~ 38 (410)
T 1vyh_C 7 QRDELNRAIADYLRSNGYEEAYSVFKKEAELD 38 (410)
T ss_dssp --------------------------------
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHhCCC
Confidence 46789999999999999999999999999875
No 109
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=46.15 E-value=24 Score=25.66 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=21.5
Q ss_pred CCccccHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 014891 376 NGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 376 ~G~V~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
||..|.... |..=.. .+...+.|+.|++.|...
T Consensus 43 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 78 (89)
T 2wbs_A 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRS 78 (89)
T ss_dssp TCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred CCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCH
Confidence 888886543 333211 244569999999999754
No 110
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=46.10 E-value=17 Score=28.46 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=39.4
Q ss_pred eeeeccccccc--CCCCCcee--ccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 355 KLVCYITKELM--DTENPPQV--LPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 355 ~~~Cpis~~~~--~~~NpP~~--lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
.-+|-|.|+.. +++..|++ --||.-+++.+.+-..+ .|.-.||.|+..|+.
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErk--eG~q~CpqCktrYkr 70 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR--EGTQNCPQCKTRYKR 70 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHH--TSCSSCTTTCCCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHh--ccCccccccCCcccc
Confidence 35788988886 55555665 57999999999987643 456799999999973
No 111
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=46.00 E-value=36 Score=26.17 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHcChHHHHHHHHHHhCCCC-cccHH
Q 014891 143 NTRVKRILVDYMLRMSYYETAEKLAESSNIQD-LVDIE 179 (416)
Q Consensus 143 ~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~~-~~d~~ 179 (416)
...++.+|.+||--.||.-|...|..|+|... ..|.+
T Consensus 18 GrLi~~LVrEyLef~~l~~TlsVf~pEs~l~~~~~~R~ 55 (82)
T 2d68_A 18 GRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRE 55 (82)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC---CCHH
T ss_pred cHHHHHHHHHHHHHcCCcchHHhhhhccCCCCCCCCHH
Confidence 35789999999999999999999999999973 33444
No 112
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=44.28 E-value=8.1 Score=28.69 Aligned_cols=25 Identities=12% Similarity=0.128 Sum_probs=20.0
Q ss_pred HHHHHHHHh--cCChHHHHHHHHhhhh
Q 014891 184 AKKVIDALQ--NKEVAPALAWCSDNKS 208 (416)
Q Consensus 184 ~~~I~~~L~--~gdl~~AL~W~~~n~~ 208 (416)
....+++|+ .||++.|++|+-.+.+
T Consensus 34 ~~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 34 YNANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 346778887 7999999999987754
No 113
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=44.12 E-value=13 Score=35.71 Aligned_cols=11 Identities=9% Similarity=0.075 Sum_probs=8.5
Q ss_pred CCCCCCCCCch
Q 014891 327 DCTKEDPLSQE 337 (416)
Q Consensus 327 ~~~~~~P~c~~ 337 (416)
|..+.||+|-.
T Consensus 180 ~~~~~CPvCGs 190 (309)
T 2fiy_A 180 ESRTLCPACGS 190 (309)
T ss_dssp TTCSSCTTTCC
T ss_pred ccCCCCCCCCC
Confidence 66788999944
No 114
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.02 E-value=32 Score=24.62 Aligned_cols=59 Identities=8% Similarity=0.040 Sum_probs=39.7
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHH
Q 014891 330 KEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAK 390 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~L-P~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~ 390 (416)
..|+.|...+.+-+.-+ .....+|.. |.|..-+..++ ...+...+|.+|.+..-.++.+
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~--~~~~~~~~~~~yC~~cy~~~~~ 66 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLR--GQHFYAVERRAYCEGCYVATLE 66 (72)
T ss_dssp CCCSSSCSCCCSSSCCEECSSSEECTTTCBCSSSCCBCT--TSCEEESSSCEEEHHHHHHHHH
T ss_pred CCCccCCCccCCCceEEEECCCeEcccCCcccccCCcCC--cCcCEeeCCeEECHHHHHHHHc
Confidence 46777776554311111 123455655 99999999995 3457888999999999888764
No 115
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.98 E-value=9 Score=27.86 Aligned_cols=45 Identities=7% Similarity=0.008 Sum_probs=30.3
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCC---------eeeecccccccCCCCCceecc
Q 014891 330 KEDPLSQESFRKLASPL-PYSKQHHS---------KLVCYITKELMDTENPPQVLP 375 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~L-P~~~~~hS---------~~~Cpis~~~~~~~NpP~~lp 375 (416)
..||+|...+.. ++-+ |-.|.|+. ...||+-+..+...++--.+.
T Consensus 16 ~~C~IC~~~~~~-p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~~ 70 (72)
T 2djb_A 16 ILCSICKGYLID-ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLSGPS 70 (72)
T ss_dssp GSCTTTSSCCSS-CEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSCCCCS
T ss_pred CCCCCCChHHHC-cCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcccccccCC
Confidence 368999776654 3344 66777665 457999999998766543333
No 116
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=42.51 E-value=7.3 Score=31.51 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=20.7
Q ss_pred CCceeccCCccccHHHHHHHHHhCCCceecCCCCccc
Q 014891 369 NPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVC 405 (416)
Q Consensus 369 NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~ 405 (416)
-||....||++| . +.-+...+||.|+.+.
T Consensus 66 ~p~~C~~CG~~F----~----~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 66 KPAQCRKCGFVF----K----AEINIPSRCPKCKSEW 94 (105)
T ss_dssp CCCBBTTTCCBC----C----CCSSCCSSCSSSCCCC
T ss_pred ECcChhhCcCee----c----ccCCCCCCCcCCCCCc
Confidence 457778999999 1 1223457999999875
No 117
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=42.12 E-value=1.7e+02 Score=26.51 Aligned_cols=89 Identities=11% Similarity=0.068 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHh---CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHh
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESS---NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQL 221 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~es---gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~L 221 (416)
..-+.+++++.+.|..+.|....++. ++. +-+.+....+. .-.+..|+.+.|++++.. ....+..
T Consensus 66 ~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~-P~~~~~~~~la--~~~~~~g~~~~Al~~l~~--------~~~~~~~- 133 (291)
T 3mkr_A 66 QAVRMFAEYLASHSRRDAIVAELDREMSRSVD-VTNTTFLLMAA--SIYFYDQNPDAALRTLHQ--------GDSLECM- 133 (291)
T ss_dssp HHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCC-CSCHHHHHHHH--HHHHHTTCHHHHHHHHTT--------CCSHHHH-
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHhcccC-CCCHHHHHHHH--HHHHHCCCHHHHHHHHhC--------CCCHHHH-
Confidence 34466788888888776666554432 221 11223222221 223357888888888876 1233322
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhc
Q 014891 222 RLQEFIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 222 r~q~fIELir~~~~~eAi~yar~~l 246 (416)
.....-+++.|+..+|+.+.++-+
T Consensus 134 -~~l~~~~~~~g~~~~A~~~l~~~~ 157 (291)
T 3mkr_A 134 -AMTVQILLKLDRLDLARKELKKMQ 157 (291)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHCCCHHHHHHHHHHHH
Confidence 222223556788888888777644
No 118
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=42.09 E-value=1e+02 Score=22.71 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=56.7
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccch--HHHHhHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSK--FEFQLRLQ 224 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~--LeF~Lr~q 224 (416)
..++..+...|.++.|..+.++. .+. ..+...+..+..+ ....|+++.|+.++..--..-...... ....++..
T Consensus 8 ~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~--~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 8 KELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAV--YFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHH--HHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 45677778888888877765543 221 1233333333332 345799999999988664332221111 11333333
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 014891 225 EFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (416)
--.-+.+.|+..+|+.+.++-+.
T Consensus 85 la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHH
Confidence 34445677999999999887654
No 119
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=41.49 E-value=7.3 Score=31.77 Aligned_cols=76 Identities=11% Similarity=0.041 Sum_probs=50.9
Q ss_pred CCCCCCchhhhccc-CCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 330 KEDPLSQESFRKLA-SPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 330 ~~~P~c~~~~~~l~-~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
..|+.|...+..-. +. -....+|.. |.|..-+..+.+....+....|.+|++..-.++.. .+-+|-.|++....
T Consensus 6 ~~C~~C~~~I~~~~~~~-a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~---~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 6 KRCAGCGGKIADRFLLY-AMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG---NSGAGGSGGHMGSG 81 (122)
T ss_dssp CCBSSSSSCCCSSCCEE-ETTEEECHHHHCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHC---CCCSSSCSSCCSCC
T ss_pred CCCcccCCEeCCcEEEE-ECCceeHhhCCCcCCCCCcccccCCeEEEECCeeecHHHHHHHcC---CCCccccCCCCcCc
Confidence 45666666543321 11 113456655 99999999998544567889999999999988752 12378888887765
Q ss_pred CC
Q 014891 408 SD 409 (416)
Q Consensus 408 ~~ 409 (416)
.+
T Consensus 82 ~~ 83 (122)
T 1m3v_A 82 GD 83 (122)
T ss_dssp EE
T ss_pred hh
Confidence 44
No 120
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.42 E-value=10 Score=20.96 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=11.3
Q ss_pred ceecCCCCcccCcC
Q 014891 395 KITCPRTGLVCNYS 408 (416)
Q Consensus 395 ~~~CP~~~~~~~~~ 408 (416)
.++|+.|++.|...
T Consensus 2 ~~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 2 PLKCRECGKQFTTS 15 (29)
T ss_dssp CEECTTTSCEESCH
T ss_pred CccCCCCCCccCCh
Confidence 47899999998643
No 121
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=40.58 E-value=41 Score=24.71 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=30.6
Q ss_pred ccHHHHHHHHHHHHHHcChHHHHHHHHHHhCCCC
Q 014891 141 WNNTRVKRILVDYMLRMSYYETAEKLAESSNIQD 174 (416)
Q Consensus 141 w~~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~~ 174 (416)
-.|+.|-|+|+.-|.--||...|..|...-+...
T Consensus 14 K~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~ 47 (66)
T 2xz2_A 14 KNREILYRLMISQLMYDGLEKFAMELSMLVKADQ 47 (66)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC
Confidence 3578999999999999999999999999988764
No 122
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=39.80 E-value=1.3e+02 Score=23.46 Aligned_cols=91 Identities=13% Similarity=-0.020 Sum_probs=54.8
Q ss_pred HHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHHH
Q 014891 149 ILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIE 228 (416)
Q Consensus 149 lI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIE 228 (416)
.++..+++.|.++.|..+.+..--.++.+.+.+..+..+ ....|+.+.|+.++..--. +...+....|.+ -.-
T Consensus 23 ~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al~-~~p~~~~~~~~l----g~~ 95 (142)
T 2xcb_A 23 ALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGAC--RQSLGLYEQALQSYSYGAL-MDINEPRFPFHA----AEC 95 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCTTCTHHHHHH----HHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHH--HHHHhhHHHHHHHHHHHHh-cCCCCcHHHHHH----HHH
Confidence 456778888988888777654321122344444444333 2468999999999876522 222223333322 233
Q ss_pred HHhcCChHHHHHHHHHhc
Q 014891 229 LVRGENNLRAITYARKYL 246 (416)
Q Consensus 229 Lir~~~~~eAi~yar~~l 246 (416)
+...|+..+|+.+.++-+
T Consensus 96 ~~~~g~~~~A~~~~~~al 113 (142)
T 2xcb_A 96 HLQLGDLDGAESGFYSAR 113 (142)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHH
Confidence 556799999999988654
No 123
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=39.49 E-value=13 Score=22.25 Aligned_cols=15 Identities=20% Similarity=0.335 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 10 KPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSBCCTTTCCCBSSH
T ss_pred CCccCCCCCcccCcH
Confidence 468999999999754
No 124
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=39.42 E-value=1.8e+02 Score=24.69 Aligned_cols=96 Identities=17% Similarity=0.117 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHhCC--CCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhH
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESSNI--QDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~esgi--~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr 222 (416)
.+-..++..+.+.|.++.|..+.++.-- ....+...+..+. .-.+..|+++.|++++..--.. ....... +
T Consensus 106 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la--~~~~~~g~~~~A~~~~~~~~~~---~~~~~~~--~ 178 (252)
T 2ho1_A 106 RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLG--LVSLQMKKPAQAKEYFEKSLRL---NRNQPSV--A 178 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHH---CSCCHHH--H
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHH--HHHHHcCCHHHHHHHHHHHHhc---CcccHHH--H
Confidence 3445566777777877777776655422 1111223322222 2234578888888887654321 1112221 1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 223 LQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
..--.-+.+.|+..+|+.+.++-+.
T Consensus 179 ~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 179 LEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1122223456788888888776543
No 125
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.07 E-value=3e+02 Score=27.20 Aligned_cols=108 Identities=9% Similarity=0.064 Sum_probs=70.1
Q ss_pred cHHHHHHHHHHHHHHcChHHHHHHHHHHhCCC--CcccH-H-HHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhcc--c
Q 014891 142 NNTRVKRILVDYMLRMSYYETAEKLAESSNIQ--DLVDI-E-VFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSK--S 215 (416)
Q Consensus 142 ~~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~--~~~d~-~-~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~--S 215 (416)
.+.++.+.++......|-+..|..+..+...+ ...|. + .-..+.+++-.+..+|+..|-...+.-+....+.. .
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 37899999999999999877766665443222 11121 1 11224466667889999999999888766555443 2
Q ss_pred hHHHHhHHHHHHHHHhcCChHHHHHHHHHhcccc
Q 014891 216 KFEFQLRLQEFIELVRGENNLRAITYARKYLAPW 249 (416)
Q Consensus 216 ~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~ 249 (416)
.+.-..+.+.-+-....+++.+|-.|...-|..+
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence 3444445555555556788999888877665544
No 126
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.97 E-value=13 Score=22.07 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2els_A 8 KIFTCEYCNKVFKFK 22 (36)
T ss_dssp CCEECTTTCCEESSH
T ss_pred CCEECCCCCceeCCH
Confidence 468999999999754
No 127
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=38.86 E-value=1.5e+02 Score=23.74 Aligned_cols=92 Identities=14% Similarity=0.031 Sum_probs=56.2
Q ss_pred HHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHHH
Q 014891 149 ILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIE 228 (416)
Q Consensus 149 lI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIE 228 (416)
.++..+++.|.++.|..+.+..--.+..+.+.+..+..+ ....|+++.|++++..-- .+...+....|.+ -.-
T Consensus 26 ~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al-~l~p~~~~~~~~l----g~~ 98 (148)
T 2vgx_A 26 SLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGAC--RQAMGQYDLAIHSYSYGA-VMDIXEPRFPFHA----AEC 98 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHH-HHSTTCTHHHHHH----HHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHH--HHHHhhHHHHHHHHHHHH-hcCCCCchHHHHH----HHH
Confidence 457778889988887776554311122344444433333 246799999999987652 2222233333332 334
Q ss_pred HHhcCChHHHHHHHHHhcc
Q 014891 229 LVRGENNLRAITYARKYLA 247 (416)
Q Consensus 229 Lir~~~~~eAi~yar~~l~ 247 (416)
+...|+..+|+.+.++-+.
T Consensus 99 ~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 99 LLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 5677999999999987643
No 128
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=38.73 E-value=1.4e+02 Score=23.27 Aligned_cols=93 Identities=16% Similarity=0.039 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHH
Q 014891 147 KRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (416)
Q Consensus 147 nrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~ 225 (416)
-..++..+.+.|.++.|....+.. .+. ..+...+..+..+ ....|+.+.|+.|+..--.. .. ..-........
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~a~~~-~p--~~~~~~~~~~~ 123 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAAS--NMALGKFRAALRDYETVVKV-KP--HDKDAKMKYQE 123 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH-ST--TCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHH--HHHhccHHHHHHHHHHHHHh-CC--CCHHHHHHHHH
Confidence 345666677788777776654432 221 2233333333322 34578999999988765322 11 22222222333
Q ss_pred HHHHHhcCChHHHHHHHHHh
Q 014891 226 FIELVRGENNLRAITYARKY 245 (416)
Q Consensus 226 fIELir~~~~~eAi~yar~~ 245 (416)
...+++.|+..+|+.+..+.
T Consensus 124 ~~~~~~~~~~~~A~~~~~~~ 143 (166)
T 1a17_A 124 CNKIVKQKAFERAIAGDEHK 143 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccch
Confidence 34455667888888877643
No 129
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=38.54 E-value=2.4e+02 Score=28.51 Aligned_cols=79 Identities=15% Similarity=0.210 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhhhhcCchhhhhccH-HHHHHHHHHHHHHcChHHHHHHHHHHh-------CCCCcccHHHHHHHHHHHH
Q 014891 118 LQAQKCRARLNHLESADAENLAEWNN-TRVKRILVDYMLRMSYYETAEKLAESS-------NIQDLVDIEVFQEAKKVID 189 (416)
Q Consensus 118 ~~~~~~~~Rl~~L~~~~~~~~~~w~~-~~lnrlI~dyLlR~Gy~etA~~l~~es-------gi~~~~d~~~f~~~~~I~~ 189 (416)
++.+.+..|+.+|+.--.+. ..+ ..|...|-+-....-..|.+.....++ .++-.+|.+.|+++++-.+
T Consensus 111 e~S~eLe~ri~yIK~kVd~q---i~~IrvLq~~l~~q~skIQRLE~dI~~q~~~Cr~pC~r~~~y~VD~~~Ye~~QKqLe 187 (491)
T 1m1j_A 111 HVSTELRRRIVTLKQRVATQ---VNRIKALQNSIQEQVVEMKRLEVDIDIKIRACKGSCARSFDYQVDKEGYDNIQKHLT 187 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTBSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhhhcHHHHHHHHHHHH
Confidence 56667777888876210111 111 123333333333333334443333332 3444567777777777777
Q ss_pred HHhcCChHHH
Q 014891 190 ALQNKEVAPA 199 (416)
Q Consensus 190 ~L~~gdl~~A 199 (416)
.+..-|+.|.
T Consensus 188 Qv~a~dL~p~ 197 (491)
T 1m1j_A 188 QASSIDMHPD 197 (491)
T ss_dssp HHTTCCCCCS
T ss_pred HhhccccCCc
Confidence 7766666553
No 130
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=38.32 E-value=13 Score=20.48 Aligned_cols=14 Identities=7% Similarity=0.019 Sum_probs=11.6
Q ss_pred ceecCCCCcccCcC
Q 014891 395 KITCPRTGLVCNYS 408 (416)
Q Consensus 395 ~~~CP~~~~~~~~~ 408 (416)
.++|+.|++.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 3 PFSCSLCPQRSRDF 16 (27)
T ss_dssp CEECSSSSCEESSH
T ss_pred CccCCCcChhhCCH
Confidence 47999999999754
No 131
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=38.04 E-value=12 Score=20.72 Aligned_cols=14 Identities=7% Similarity=0.090 Sum_probs=11.3
Q ss_pred ceecCCCCcccCcC
Q 014891 395 KITCPRTGLVCNYS 408 (416)
Q Consensus 395 ~~~CP~~~~~~~~~ 408 (416)
.+.|+.|++.|...
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 1ard_A 2 SFVCEVCTRAFARQ 15 (29)
T ss_dssp CCBCTTTCCBCSSH
T ss_pred CeECCCCCcccCCH
Confidence 36899999999754
No 132
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=37.76 E-value=1.8e+02 Score=24.38 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhcc--chHHHHhH
Q 014891 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSK--SKFEFQLR 222 (416)
Q Consensus 146 lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~--S~LeF~Lr 222 (416)
.-..++..+++.|.++.|..+.++. .+. .+.+.+..+. .-....|+++.|+.++...-..-.+.. ......++
T Consensus 7 ~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 82 (258)
T 3uq3_A 7 KEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRA--AAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF 82 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHH--HHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHH--HHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH
Confidence 3456788888899888877765433 121 2333333332 234567999999999887544332221 11113344
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 223 LQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
...-.-+...|+..+|+.+.++-+.
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHh
Confidence 4444455677899999999887655
No 133
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=37.30 E-value=1.6e+02 Score=23.50 Aligned_cols=53 Identities=9% Similarity=-0.064 Sum_probs=34.2
Q ss_pred HHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 190 ALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 190 ~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
.+..|+++.|+.++..--. +...+. ..+...-.-+...|+..+|+.+.++-+.
T Consensus 73 ~~~~~~~~~A~~~~~~al~-~~p~~~----~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 73 YLNIGDLHEAEETSSEVLK-REETNE----KALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHTCHHHHHHHHHHHHH-HSTTCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHh-cCCcch----HHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 4467999999999976522 222222 2333334445667999999999987554
No 134
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=37.09 E-value=12 Score=31.44 Aligned_cols=77 Identities=9% Similarity=0.057 Sum_probs=49.6
Q ss_pred CCCCCCchhhhcccCCCCCCCCCC----------CeeeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecC
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHH----------SKLVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCP 399 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~h----------S~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP 399 (416)
-.||+|...+.. ++.+|-.|.|. +...||+.+......++-..+.-..++...++++... .-.+.||
T Consensus 32 ~~C~IC~~~~~~-pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~l~~~~~~~d~~~~~~i~--~L~v~Cp 108 (141)
T 3knv_A 32 YLCSACRNVLRR-PFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVE--SLPAVCP 108 (141)
T ss_dssp GBCTTTCSBCSS-EEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCCCTTTTEECGGGCEECHHHHHHHH--TSEEECC
T ss_pred cCCCCCChhhcC-cEECCCCCccCHHHHHHHHhcCCCCCCCCCCcccccccccccchhhhcccHHHHHHHc--ccccccC
Confidence 368999776542 24467777653 3378999998775544334455667777777776653 4589998
Q ss_pred C--CCcccCcCC
Q 014891 400 R--TGLVCNYSD 409 (416)
Q Consensus 400 ~--~~~~~~~~~ 409 (416)
+ |+....+.+
T Consensus 109 n~GC~~~~~l~~ 120 (141)
T 3knv_A 109 SDGCTWKGTLKE 120 (141)
T ss_dssp STTCCCEEEHHH
T ss_pred CCCCCCEeEHHH
Confidence 6 665554433
No 135
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=36.96 E-value=1.5e+02 Score=23.04 Aligned_cols=97 Identities=10% Similarity=0.188 Sum_probs=56.0
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchH--HHHhHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKF--EFQLRLQ 224 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~L--eF~Lr~q 224 (416)
+-++.-+++.|.++.|...-+++ .+. +.+...+..+..+ -+..|+++.|++++..--..-.+..... .-..+..
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~--~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELD-PSNITFYNNKAAV--YFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHH--HHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 45788889999888877765443 232 2344555444443 3457999999999875432111111111 1112222
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 014891 225 EFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (416)
.-.-+...|+..+|+.+.++-+.
T Consensus 89 lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh
Confidence 22234456899999999887665
No 136
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=36.71 E-value=13 Score=25.89 Aligned_cols=22 Identities=14% Similarity=0.202 Sum_probs=17.7
Q ss_pred HHHHHHh--cCChHHHHHHHHhhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDNK 207 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n~ 207 (416)
+++.+|+ +||++.|++|+-.+.
T Consensus 28 ~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 28 ANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcC
Confidence 5777776 699999999997653
No 137
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=36.63 E-value=2.1e+02 Score=24.83 Aligned_cols=98 Identities=11% Similarity=-0.026 Sum_probs=57.8
Q ss_pred HHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHH-HH-HHHHHHHhcCChHHHHHHHHhhhhhhhhcc-chHHHHhHHH
Q 014891 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQ-EA-KKVIDALQNKEVAPALAWCSDNKSRLKKSK-SKFEFQLRLQ 224 (416)
Q Consensus 149 lI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~-~~-~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~-S~LeF~Lr~q 224 (416)
+.+..+++.|.++.|..+.++. .+. ..+..... -. ....-....|+++.|++++..--....+.+ ......++..
T Consensus 10 ~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 88 (338)
T 3ro2_A 10 LEGERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGN 88 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 4577888999888887775543 221 22322111 11 122223468999999999887654433322 2233444444
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 014891 225 EFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (416)
--.-+...|+..+|+.+.++-+.
T Consensus 89 l~~~~~~~g~~~~A~~~~~~al~ 111 (338)
T 3ro2_A 89 LGNTLKVLGNFDEAIVCCQRHLD 111 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHH
Confidence 44455677899999998887544
No 138
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=36.49 E-value=12 Score=20.31 Aligned_cols=13 Identities=8% Similarity=-0.074 Sum_probs=10.8
Q ss_pred eecCCCCcccCcC
Q 014891 396 ITCPRTGLVCNYS 408 (416)
Q Consensus 396 ~~CP~~~~~~~~~ 408 (416)
++|+.|++.|...
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 5899999999754
No 139
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=36.43 E-value=13 Score=25.22 Aligned_cols=19 Identities=26% Similarity=0.204 Sum_probs=15.7
Q ss_pred HHHHHHh--cCChHHHHHHHH
Q 014891 186 KVIDALQ--NKEVAPALAWCS 204 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~ 204 (416)
.++.+|+ +||++.|++|+-
T Consensus 24 ~~~~AL~~~~gnv~~Ave~L~ 44 (46)
T 2bwb_A 24 RNVAALRRSGGSVQGALDSLL 44 (46)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHH
Confidence 5677776 799999999974
No 140
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=36.07 E-value=2.5e+02 Score=25.54 Aligned_cols=99 Identities=11% Similarity=-0.007 Sum_probs=58.6
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHH-HHH-HHHHHhcCChHHHHHHHHhhhhhhhhcc-chHHHHhHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQE-AKK-VIDALQNKEVAPALAWCSDNKSRLKKSK-SKFEFQLRL 223 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~-~~~-I~~~L~~gdl~~AL~W~~~n~~~L~k~~-S~LeF~Lr~ 223 (416)
...++.+++.|.++.|..+.++. .+ ...+.+.... ... -.-....|+.+.|+.++..--....+.+ .......+.
T Consensus 13 ~~~g~~~~~~g~~~~A~~~~~~al~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 91 (406)
T 3sf4_A 13 ALEGERLCKSGDCRAGVSFFEAAVQV-GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASG 91 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 46788889999988888775543 22 1223322211 111 2223458999999999887544433332 223344444
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 014891 224 QEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (416)
.--.-+...|+..+|+.+.++-+.
T Consensus 92 ~la~~~~~~g~~~~A~~~~~~al~ 115 (406)
T 3sf4_A 92 NLGNTLKVLGNFDEAIVCCQRHLD 115 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444455667899999988876544
No 141
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=35.74 E-value=12 Score=24.65 Aligned_cols=18 Identities=17% Similarity=0.451 Sum_probs=14.0
Q ss_pred CCCceecCCCCcccCcCC
Q 014891 392 NNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 392 ~~~~~~CP~~~~~~~~~~ 409 (416)
.....+||+|++.+...+
T Consensus 6 ~~~~~~C~~C~~~i~~~~ 23 (39)
T 2i5o_A 6 AEDQVPCEKCGSLVPVWD 23 (39)
T ss_dssp CCCEEECTTTCCEEEGGG
T ss_pred cCCCcccccccCcCCccc
Confidence 346789999999987654
No 142
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=35.26 E-value=20 Score=29.01 Aligned_cols=71 Identities=11% Similarity=0.090 Sum_probs=48.1
Q ss_pred CCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcC
Q 014891 331 EDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 331 ~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 408 (416)
.|+.|...+..-..-......+|.. |.|..-+..+++. ++....|.+|.+..-.++. ..+|+.|++.....
T Consensus 5 ~C~~C~~~I~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~--~f~~~~g~~yC~~cy~~~~-----~~~C~~C~~~I~~~ 76 (126)
T 2xqn_T 5 RCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGE--IYVMVNDKPVCKPCYVKNH-----AVVCQGCHNAIDPE 76 (126)
T ss_dssp BBTTTSSBCCSSCEEEETTEEECGGGSBCTTTCCBCTTS--EEEEETTEEEEHHHHHHHS-----CCBCTTTCSBCCTT
T ss_pred CCccCCCEeCCceEEeeCCCCccCCCCCcCCCCCCCCcC--EEEeECCEEechHHhCcCc-----CccCcccCCcCCcC
Confidence 4666655443211000112345555 9999999999753 6888999999999988763 25899999988754
No 143
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=35.22 E-value=15 Score=26.27 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=17.6
Q ss_pred HHHHHHHh--cCChHHHHHHHHhh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSDN 206 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~n 206 (416)
..++.+|+ +||++.|++|+-.+
T Consensus 33 ~~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 33 DRNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 35777776 79999999998654
No 144
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=35.18 E-value=46 Score=24.63 Aligned_cols=33 Identities=9% Similarity=0.146 Sum_probs=21.1
Q ss_pred CCccccHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 014891 376 NGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 376 ~G~V~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
||..|.... |.+=.+ .+...++|+.|++.|...
T Consensus 53 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 88 (100)
T 2ebt_A 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS 88 (100)
T ss_dssp CCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred CCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence 888776543 332211 234568999999999754
No 145
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=35.17 E-value=15 Score=25.78 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=17.8
Q ss_pred HHHHHHh--cCChHHHHHHHHhhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDNK 207 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n~ 207 (416)
..+.+|+ +||++.|++|+-.+.
T Consensus 26 ~n~~AL~~~~Gdv~~Ave~L~~~~ 49 (54)
T 2dah_A 26 ANLQALIATGGDVDAAVEKLRQSS 49 (54)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHhCC
Confidence 4677776 799999999997663
No 146
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=34.60 E-value=1.7e+02 Score=23.25 Aligned_cols=94 Identities=10% Similarity=-0.096 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHH
Q 014891 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQ 224 (416)
Q Consensus 146 lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q 224 (416)
.-..++..+++.|.++.|....++. .+. ..+...+..+..+ .+..|+++.|+.++..--. +...+.. .+..
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~--~~~~g~~~~A~~~~~~al~-~~p~~~~----~~~~ 84 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAA--YSASGQHEKAAEDAELATV-VDPKYSK----AWSR 84 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCTTCHH----HHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHH--HHHccCHHHHHHHHHHHHH-hCCCCHH----HHHH
Confidence 3456677788888888777665443 222 2234444433333 3467999999999876532 2222222 2223
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 014891 225 EFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (416)
.-.-+.+.|+..+|+.+.++-+.
T Consensus 85 lg~~~~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHH
Confidence 33345567999999999886543
No 147
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=34.46 E-value=13 Score=20.42 Aligned_cols=14 Identities=14% Similarity=0.294 Sum_probs=11.5
Q ss_pred ceecCCCCcccCcC
Q 014891 395 KITCPRTGLVCNYS 408 (416)
Q Consensus 395 ~~~CP~~~~~~~~~ 408 (416)
.+.|+.|++.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 47899999998753
No 148
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=34.30 E-value=12 Score=20.79 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.5
Q ss_pred ceecCCCCcccCcC
Q 014891 395 KITCPRTGLVCNYS 408 (416)
Q Consensus 395 ~~~CP~~~~~~~~~ 408 (416)
.++|+.|++.|...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL 16 (27)
T ss_dssp TEEETTTTEEESCH
T ss_pred CcCCCCCCcccCCH
Confidence 47899999998754
No 149
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=34.19 E-value=11 Score=32.53 Aligned_cols=82 Identities=10% Similarity=0.037 Sum_probs=44.5
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCc
Q 014891 330 KEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNY 407 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~L-P~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~ 407 (416)
..|..|...+.+-+.-+ .....+|.. |.|..-+..+...+..+...+|.+|++....++.+...+...+-+-...++.
T Consensus 66 ~~C~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~~C~~c~~~~~~~~~~~~~~~rprt~~~~ 145 (169)
T 2rgt_A 66 TKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQGGSGGSGGSGGGTPMVA 145 (169)
T ss_dssp CBCTTTCCBCCTTSEEEEETTEEEEGGGCBCTTTCCBCCTTCEEEECTTSCEEEHHHHHHHHHCC----------EEEEC
T ss_pred ccccccccccCCCcEEEEcCCceEeeCCCcCCCCCCCCCCCCceEEccCCeEECHHHHHHHhhccCCCCCCcCCCCcccH
Confidence 45666655443321110 123455544 9999999999755545567899999999998886543222222232334544
Q ss_pred CCce
Q 014891 408 SDLV 411 (416)
Q Consensus 408 ~~~~ 411 (416)
++.+
T Consensus 146 ~q~~ 149 (169)
T 2rgt_A 146 ASPE 149 (169)
T ss_dssp CCCE
T ss_pred HHHH
Confidence 4443
No 150
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=34.14 E-value=16 Score=19.98 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=11.3
Q ss_pred eecCCCCcccCcCC
Q 014891 396 ITCPRTGLVCNYSD 409 (416)
Q Consensus 396 ~~CP~~~~~~~~~~ 409 (416)
++|+.|++.|....
T Consensus 3 ~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 3 HKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCSSCCCCCCTTT
T ss_pred CcCCCCCcccCCHH
Confidence 68999999997543
No 151
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=33.98 E-value=1.5e+02 Score=22.41 Aligned_cols=53 Identities=11% Similarity=0.261 Sum_probs=34.0
Q ss_pred HHHHHHHHhhhHHHHHhHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014891 53 EHYKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEEGS 113 (416)
Q Consensus 53 E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~l~~li~kl~~lkrkl~~~~ 113 (416)
+.||+++|-.--.---|+..+-..=.+|++. ..+|+.||++++.=+..++..+
T Consensus 10 DKLRrrl~E~~~q~qaEl~sLrrT~~EL~~G--------~~KL~~mi~~l~~E~~~l~~ni 62 (78)
T 3iv1_A 10 DKLRWRMKEEMDRAQAELNALKRTEEDLKKG--------HQKLEEMVTRLDQEVAEVDKNI 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 4577777755444445666666655566542 2489999999887666665544
No 152
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=33.84 E-value=2.7e+02 Score=25.98 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=25.8
Q ss_pred hcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhc
Q 014891 192 QNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 192 ~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (416)
..|+++.|+.++...-. +...+......++..--.-+.+.|+..+|+.+.++-+
T Consensus 269 ~~g~~~~A~~~~~~~l~-~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 322 (450)
T 2y4t_A 269 RDGRYTDATSKYESVMK-TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVL 322 (450)
T ss_dssp HHTCHHHHHHHHHHHHH-HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHh-cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45666666666655422 1111122222333333334445566666666666543
No 153
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=33.82 E-value=14 Score=33.23 Aligned_cols=9 Identities=22% Similarity=0.165 Sum_probs=5.5
Q ss_pred eecCCCCcc
Q 014891 396 ITCPRTGLV 404 (416)
Q Consensus 396 ~~CP~~~~~ 404 (416)
-+||.|+..
T Consensus 187 ~~CP~C~~~ 195 (202)
T 1yuz_A 187 EKCPICFRP 195 (202)
T ss_dssp SBCTTTCCB
T ss_pred CCCCCCCCC
Confidence 367777653
No 154
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=33.52 E-value=2.9e+02 Score=25.47 Aligned_cols=101 Identities=14% Similarity=0.046 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHh-CC----CCcc-cHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccc--h
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESS-NI----QDLV-DIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS--K 216 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~es-gi----~~~~-d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S--~ 216 (416)
...-..+.++.+.|.++.|..+.+++ .+ .+.. ....+..+..+ ....|+.+.|+.++..--....+.+. .
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~--~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 181 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSES--YYYMKQTYFSMDYARQAYEIYKEHEAYNI 181 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHTCSTTHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHHHHhCccchH
Confidence 34456788889999988888776554 22 1111 11222222222 22479999999998876555444432 1
Q ss_pred HHHHhHHHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 217 FEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 217 LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
........--.-+...|+..+|+.|.++-+.
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 1111222222234456788888888776553
No 155
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.50 E-value=17 Score=21.40 Aligned_cols=15 Identities=13% Similarity=0.390 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 8 KPYKCPQCSYASAIK 22 (36)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 458999999999754
No 156
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=33.39 E-value=36 Score=29.78 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=39.6
Q ss_pred CCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHH
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAK 390 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~ 390 (416)
..|..|...+.+-+.-.-....+|.. |.|..-+..+.+. ++..-.|.+|++....++..
T Consensus 8 ~~C~~C~~~I~~~~~v~a~g~~wH~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~cy~~~f~ 67 (192)
T 1b8t_A 8 KKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDST--TVAVHGDEIYCKSCYGKKYG 67 (192)
T ss_dssp EECTTTCCEECSSCCEEETTEEECTTTCBCTTTCCBCCSS--SEEEETTEEEEHHHHHHHHS
T ss_pred CcCccCCCeecceeEEEeCCceecCCCCcCcccCCcCCCC--eeEecCCEeeChhhhHhhcC
Confidence 35777766553211101123456644 9999999999765 47778999999999988753
No 157
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=33.31 E-value=2.1e+02 Score=23.82 Aligned_cols=66 Identities=12% Similarity=0.179 Sum_probs=43.2
Q ss_pred ccccccHHHHHHHHHhhhHHHHHhHHHHHHHHHHhhhcC--CCChhHHHHHHHHHHHHHHHHHHHHHh
Q 014891 46 QFLRVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSE--NFSKDDAVNHLTSLVSRLQGLKRKLEE 111 (416)
Q Consensus 46 ~~~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~--~~~~~~~~~~l~~li~kl~~lkrkl~~ 111 (416)
..+|.-.+.+.+||-.+++.+-|.-..-....-++.+.. ..+-.+....++.+.+.+..|++.|+.
T Consensus 63 ~~Lrae~~~~QRn~~K~~~~Lkrn~~qQnQQSlDiRKLrELEADLKEKDsMVe~LT~TiG~LrKELEd 130 (167)
T 4gkw_A 63 GKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRKLGELEADLKEKDSMVESLTETIGILRKELEN 130 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhhhHHHhHhhhhHHHHHHHHhHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 456777788888888888888886655544444443311 122334456777778888888888864
No 158
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=33.08 E-value=29 Score=22.90 Aligned_cols=34 Identities=9% Similarity=0.157 Sum_probs=20.6
Q ss_pred cCCccccHHH-HHHHHHh--CCCceecCCCCcccCcC
Q 014891 375 PNGYVYSTKA-LEEMAKK--NNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~s~~a-l~~l~~~--~~~~~~CP~~~~~~~~~ 408 (416)
-||..|.... |..=.+. +...+.|+.|++.|...
T Consensus 6 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 6 ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK 42 (57)
T ss_dssp TTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSH
T ss_pred CCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCH
Confidence 3666665443 3332222 33468999999999754
No 159
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=33.01 E-value=18 Score=21.05 Aligned_cols=15 Identities=13% Similarity=-0.068 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 6 SGYVCALCLKKFVSS 20 (35)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCcchhCCH
Confidence 458999999999754
No 160
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.92 E-value=80 Score=23.04 Aligned_cols=64 Identities=11% Similarity=0.092 Sum_probs=41.9
Q ss_pred ccCCCCCCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCcee-ccCCccccHHHHHHHH
Q 014891 324 YEDDCTKEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQV-LPNGYVYSTKALEEMA 389 (416)
Q Consensus 324 ~~~~~~~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~-lp~G~V~s~~al~~l~ 389 (416)
|.......|+.|...+....+. .....+|.. |.|..-+..+.+.. .+. ..+|.+|.+..-.++.
T Consensus 10 y~~~~~~~C~~C~~~I~~~~~~-a~~~~~H~~CF~C~~C~~~L~~g~-~f~~~~~~~~~C~~c~~~~~ 75 (81)
T 1x6a_A 10 YWGKFGEFCHGCSLLMTGPFMV-AGEFKYHPECFACMSCKVIIEDGD-AYALVQHATLYCGKCHNEVV 75 (81)
T ss_dssp SSCCSSCBCTTTCCBCCSCCBC-CTTCCBCTTSCBCTTTCCBCCTTS-CEEECSSSCEEEHHHHHHHH
T ss_pred HhhhcCCcCccCCCCcCceEEE-ECCceeccccCCccCCCCccCCCC-cEEEeeCCEEECHHHHHHHh
Confidence 4443445688887765522211 123556654 99999999996533 355 4899999998887764
No 161
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=32.73 E-value=16 Score=20.11 Aligned_cols=15 Identities=33% Similarity=0.450 Sum_probs=11.7
Q ss_pred ceecCCCCcccCcCC
Q 014891 395 KITCPRTGLVCNYSD 409 (416)
Q Consensus 395 ~~~CP~~~~~~~~~~ 409 (416)
.+.|+.|++.|....
T Consensus 2 ~~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 2 KFACPECPKRFMRSD 16 (29)
T ss_dssp CEECSSSSCEESCSH
T ss_pred CccCCCCCchhCCHH
Confidence 368999999987543
No 162
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=32.46 E-value=36 Score=23.78 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=21.5
Q ss_pred CCccccHHHHH-HHHH--hCCCceecCC--CCcccCcCC
Q 014891 376 NGYVYSTKALE-EMAK--KNNGKITCPR--TGLVCNYSD 409 (416)
Q Consensus 376 ~G~V~s~~al~-~l~~--~~~~~~~CP~--~~~~~~~~~ 409 (416)
||.+|....-. .=.+ .+...++|++ |++.|....
T Consensus 25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~ 63 (72)
T 2epa_A 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63 (72)
T ss_dssp TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHH
T ss_pred CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHH
Confidence 88888755433 2111 2345699976 999997543
No 163
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=32.33 E-value=1.6e+02 Score=21.98 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=27.8
Q ss_pred cccccHHHHHH---HHHhhhHHHHHhHHHHHHHHHHhhh
Q 014891 47 FLRVPFEHYKK---TIRTNHRAVEKEITSVISNVADVSD 82 (416)
Q Consensus 47 ~~~vP~E~l~k---~fr~~qk~ieke~~~v~~~~~~l~~ 82 (416)
.++|.+|.|+. .|+.....|+..+..+...+..|..
T Consensus 6 ~i~v~~~~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~ 44 (99)
T 3zbh_A 6 VIRLTPEELRGVARQYNVESSNVTELIARLDQMSHTLQG 44 (99)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47888988876 7888888888899999888888865
No 164
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=32.28 E-value=1.2e+02 Score=28.13 Aligned_cols=61 Identities=15% Similarity=0.196 Sum_probs=40.1
Q ss_pred HHhcCChHHHHHHHHhhhhhhhhccchH-HHHhHHHHHHHHHhcCChHHHHHHHHHhccccc
Q 014891 190 ALQNKEVAPALAWCSDNKSRLKKSKSKF-EFQLRLQEFIELVRGENNLRAITYARKYLAPWG 250 (416)
Q Consensus 190 ~L~~gdl~~AL~W~~~n~~~L~k~~S~L-eF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~ 250 (416)
....|+.+.|+.++..--....+.+... .-..+..--.-....|+..+|+.|.++-+.-+.
T Consensus 113 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~ 174 (383)
T 3ulq_A 113 ELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYK 174 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3457888888888877766666554443 444444444555567888888888887765443
No 165
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=32.25 E-value=15 Score=25.51 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=16.6
Q ss_pred HHHHHHh--cCChHHHHHHHHhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDN 206 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n 206 (416)
.++.+|+ +||++.|++|+-.|
T Consensus 29 ~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 29 ANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCHHHHHHHHHhC
Confidence 5777776 68999999998543
No 166
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=32.11 E-value=39 Score=24.69 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=17.9
Q ss_pred HHHHHHh--cCChHHHHHHHHhhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDNK 207 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n~ 207 (416)
...++|. +||++.|+.|+.+..
T Consensus 26 dcKkAL~e~~GDi~~Ai~~Lr~kg 49 (64)
T 2cp9_A 26 NCKKALETCGGDLKQAEIWLHKEA 49 (64)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHh
Confidence 4667775 799999999998664
No 167
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=31.99 E-value=50 Score=23.33 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=20.8
Q ss_pred cCCccccHH-HHHHHHH--hCCCceecCCCCcccCcC
Q 014891 375 PNGYVYSTK-ALEEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~s~~-al~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
-||..|... .|..=.+ .+...++|+.|++.|...
T Consensus 34 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 70 (82)
T 2kmk_A 34 YCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS 70 (82)
T ss_dssp SSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSH
T ss_pred cCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCCh
Confidence 367766443 3332211 244569999999998754
No 168
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.21 E-value=9.7 Score=20.76 Aligned_cols=15 Identities=27% Similarity=0.299 Sum_probs=11.9
Q ss_pred eecCCCCcccCcCCc
Q 014891 396 ITCPRTGLVCNYSDL 410 (416)
Q Consensus 396 ~~CP~~~~~~~~~~~ 410 (416)
++|+.|++.|.....
T Consensus 3 ~~C~~C~k~f~~~~~ 17 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQ 17 (26)
Confidence 689999999976543
No 169
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=31.88 E-value=2.8e+02 Score=25.54 Aligned_cols=98 Identities=7% Similarity=-0.080 Sum_probs=56.0
Q ss_pred HHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHH-HHH-HHHHHhcCChHHHHHHHHhhhhhhhhcc-chHHHHhHHH
Q 014891 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQE-AKK-VIDALQNKEVAPALAWCSDNKSRLKKSK-SKFEFQLRLQ 224 (416)
Q Consensus 149 lI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~-~~~-I~~~L~~gdl~~AL~W~~~n~~~L~k~~-S~LeF~Lr~q 224 (416)
.++..+++.|.++.|..+.++. .+. ..+.+.... ... -.-....|+++.|++++.+--....+.+ .......+..
T Consensus 53 ~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 131 (411)
T 4a1s_A 53 LEGERLCNAGDCRAGVAFFQAAIQAG-TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGN 131 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHhc-ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 5677888888888777765443 121 123222111 111 1222357999999999887654433332 2333344444
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 014891 225 EFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (416)
--.-+...|+..+|+.+.++-+.
T Consensus 132 l~~~~~~~g~~~~A~~~~~~al~ 154 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERHLT 154 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHH
Confidence 44455667888888888876544
No 170
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.85 E-value=19 Score=21.50 Aligned_cols=15 Identities=13% Similarity=0.330 Sum_probs=12.5
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 8 RAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCEECSSSSCEECSS
T ss_pred CCeECCCCChhhccC
Confidence 458999999999764
No 171
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=31.81 E-value=1.6e+02 Score=22.12 Aligned_cols=93 Identities=12% Similarity=0.000 Sum_probs=54.7
Q ss_pred HHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHH
Q 014891 147 KRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (416)
Q Consensus 147 nrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~ 225 (416)
-..++..++..|.++.|....+.. .+. ..+.+.+..+..+ .+..|+++.|+.++..--. +...+. ..+..-
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~--~~~~~~~~~A~~~~~~al~-~~p~~~----~~~~~l 83 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALC--YLKMQQPEQALADCRRALE-LDGQSV----KAHFFL 83 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCTTCH----HHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHHHHH--HHHhcCHHHHHHHHHHHHH-hCchhH----HHHHHH
Confidence 356677788888887777665443 222 2233443333332 3468999999999876532 211112 222333
Q ss_pred HHHHHhcCChHHHHHHHHHhcc
Q 014891 226 FIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 226 fIELir~~~~~eAi~yar~~l~ 247 (416)
-.-+...|+..+|+.+.++-+.
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 3345567899999999886553
No 172
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=31.80 E-value=20 Score=19.75 Aligned_cols=14 Identities=14% Similarity=0.199 Sum_probs=11.4
Q ss_pred ceecCCCCcccCcC
Q 014891 395 KITCPRTGLVCNYS 408 (416)
Q Consensus 395 ~~~CP~~~~~~~~~ 408 (416)
.+.|+.|++.|...
T Consensus 3 ~~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 3 PYQCDYCGRSFSDP 16 (30)
T ss_dssp CEECTTTCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 47899999998753
No 173
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.76 E-value=16 Score=20.31 Aligned_cols=14 Identities=14% Similarity=0.188 Sum_probs=11.4
Q ss_pred eecCCCCcccCcCC
Q 014891 396 ITCPRTGLVCNYSD 409 (416)
Q Consensus 396 ~~CP~~~~~~~~~~ 409 (416)
+.|+.|++.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1paa_A 3 YACGLCNRAFTRRD 16 (30)
T ss_dssp SBCTTTCCBCSSSH
T ss_pred cCCcccCcccCChH
Confidence 68999999997543
No 174
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=31.62 E-value=27 Score=26.52 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=21.9
Q ss_pred CCccccHH-HHHHHHHh--CCCceecCCCCcccCcCC
Q 014891 376 NGYVYSTK-ALEEMAKK--NNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 376 ~G~V~s~~-al~~l~~~--~~~~~~CP~~~~~~~~~~ 409 (416)
||..|... .|.+=.+. +...++|++|++.|....
T Consensus 34 Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~ 70 (85)
T 2lv2_A 34 CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSP 70 (85)
T ss_dssp SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHH
T ss_pred CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHH
Confidence 67776654 44443322 335699999999997654
No 175
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=31.61 E-value=2.4e+02 Score=23.93 Aligned_cols=75 Identities=8% Similarity=0.165 Sum_probs=53.0
Q ss_pred HHHhhhHHHHHhHHHHHHHHHHhhh---cCCCChhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhh
Q 014891 58 TIRTNHRAVEKEITSVISNVADVSD---SENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLES 132 (416)
Q Consensus 58 ~fr~~qk~ieke~~~v~~~~~~l~~---~~~~~~~~~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~~ 132 (416)
.|...++.+-+.+-.-.+.|..|-. .-+.+.++..+.|..+-+.++...+++.+.+++-+..++++..-+..+.+
T Consensus 54 ~f~~~~~ela~dli~kakqIe~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~l~~ia~ 131 (151)
T 1yke_B 54 EFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSLIEDFVD 131 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666664443333333333322 12457788899999999999999999999998888888888887777663
No 176
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.50 E-value=19 Score=21.27 Aligned_cols=15 Identities=7% Similarity=0.133 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 8 KPFKCSLCEYATRSK 22 (36)
T ss_dssp CSEECSSSSCEESCH
T ss_pred CCccCCCCCchhCCH
Confidence 458999999999754
No 177
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.27 E-value=1.7e+02 Score=22.13 Aligned_cols=95 Identities=8% Similarity=-0.003 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHh-CCCCccc---HHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHH
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESS-NIQDLVD---IEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQ 220 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d---~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~ 220 (416)
..-..++..+++.|.++.|..+.++. .+.. .+ ...+..+. .-.+..|+++.|+.++...-.. ...+. .
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~~~~~-~~~~~----~ 100 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGLDA-TPQDQAVLHRNRA--ACHLKLEDYDKAETEASKAIEK-DGGDV----K 100 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC-CHHHHHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHH-TSCCH----H
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc-cchHHHHHHHHHH--HHHHHHccHHHHHHHHHHHHhh-CccCH----H
Confidence 33456677888888888877765544 3332 12 22222222 2235689999999999765332 11122 2
Q ss_pred hHHHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 221 LRLQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 221 Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
.+...-.-+...|+..+|+.+.++-+.
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 222233345567899999999887654
No 178
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.10 E-value=20 Score=24.73 Aligned_cols=18 Identities=22% Similarity=0.545 Sum_probs=14.7
Q ss_pred CCceecCCCCcccCcCCc
Q 014891 393 NGKITCPRTGLVCNYSDL 410 (416)
Q Consensus 393 ~~~~~CP~~~~~~~~~~~ 410 (416)
++...||.|+..|+..+.
T Consensus 10 ~~~~~CPrCn~~f~~~~s 27 (49)
T 2e72_A 10 GGRKICPRCNAQFRVTEA 27 (49)
T ss_dssp SSCCCCTTTCCCCSSHHH
T ss_pred CCceeCCcccccccchHH
Confidence 468899999999986543
No 179
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=30.91 E-value=16 Score=26.69 Aligned_cols=48 Identities=17% Similarity=0.147 Sum_probs=35.5
Q ss_pred CCCCCe-eeecccccccCCCCCceeccCCccccH-HHHHHHHHhCCCceecCCCCcc
Q 014891 350 KQHHSK-LVCYITKELMDTENPPQVLPNGYVYST-KALEEMAKKNNGKITCPRTGLV 404 (416)
Q Consensus 350 ~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~-~al~~l~~~~~~~~~CP~~~~~ 404 (416)
..+|.. |.|..-+..+++. ++...+|.+|.+ ....++. ..+|-.|+..
T Consensus 21 ~~~H~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~~cy~~~f-----~~~C~~C~~~ 70 (76)
T 1iml_A 21 KDWHRPCLKCEKCGKTLTSG--GHAEHEGKPYCNHPCYSAMF-----GPKGFGRGGA 70 (76)
T ss_dssp EEEETTTCBCTTTCCBCCTT--TEEEETTEEEETTTHHHHHS-----SCCCSSCCCS
T ss_pred ccccCCCCCccccCccCCCC--ceECcCCeEeeCHHHHHHHh-----CccCCCcCCc
Confidence 455554 9999999998765 577889999998 4776653 2478888754
No 180
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=30.90 E-value=2.2e+02 Score=23.22 Aligned_cols=92 Identities=8% Similarity=-0.153 Sum_probs=38.7
Q ss_pred HHHHHHHHHc-ChHHHHHHHHHHhCC--CCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHH
Q 014891 148 RILVDYMLRM-SYYETAEKLAESSNI--QDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQ 224 (416)
Q Consensus 148 rlI~dyLlR~-Gy~etA~~l~~esgi--~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q 224 (416)
..++..+... |.++.|..+.+..-- ....+...+..+ ..-....|+++.|++++..--.. ....... +..
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~A~~~~~~~~~~---~~~~~~~--~~~ 152 (225)
T 2vq2_A 80 NNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNK--GICSAKQGQFGLAEAYLKRSLAA---QPQFPPA--FKE 152 (225)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH---STTCHHH--HHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHH--HHHHHHcCCHHHHHHHHHHHHHh---CCCCchH--HHH
Confidence 3455555566 666555555433211 111112222222 22223456666666666544221 1111111 111
Q ss_pred HHHHHHhcCChHHHHHHHHHhc
Q 014891 225 EFIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l 246 (416)
--.-+.+.|+..+|+.+.++.+
T Consensus 153 la~~~~~~~~~~~A~~~~~~~~ 174 (225)
T 2vq2_A 153 LARTKMLAGQLGDADYYFKKYQ 174 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 1222334566666666666543
No 181
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.88 E-value=22 Score=20.91 Aligned_cols=15 Identities=13% Similarity=0.116 Sum_probs=12.1
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 ~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 8 KTHLCDMCGKKFKSK 22 (36)
T ss_dssp SSCBCTTTCCBCSSH
T ss_pred CCeecCcCCCCcCch
Confidence 458999999999753
No 182
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=30.71 E-value=3.3e+02 Score=25.31 Aligned_cols=105 Identities=5% Similarity=-0.143 Sum_probs=69.0
Q ss_pred hhhhhccHHHHHHHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccc
Q 014891 136 ENLAEWNNTRVKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS 215 (416)
Q Consensus 136 ~~~~~w~~~~lnrlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S 215 (416)
-.+..+++..+.-..+-.|...|.++-|..+....-....-+. .....-.-.++.++++.|+..+..... -...
T Consensus 94 ~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~---~~~~~a~l~~~~~r~~dA~~~l~~a~~---~~d~ 167 (282)
T 4f3v_A 94 ITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL---VAWMKAVVYGAAERWTDVIDQVKSAGK---WPDK 167 (282)
T ss_dssp CEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH---HHHHHHHHHHHTTCHHHHHHHHTTGGG---CSCH
T ss_pred cccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH---HHHHHHHHHHHcCCHHHHHHHHHHhhc---cCCc
Confidence 3456678899999999999999999888888765533332222 333334466778999999999863321 1111
Q ss_pred hHHHHhHHHHHHHHHhcCChHHHHHHHHHhc
Q 014891 216 KFEFQLRLQEFIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 216 ~LeF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (416)
.+.=..+..--.=+.+.|+..+|+.+.++-.
T Consensus 168 ~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 168 FLAGAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 1222244444555677799999999988764
No 183
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=30.49 E-value=34 Score=22.87 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=20.3
Q ss_pred CCccccHH-HHHHHHHh--CCCceecCCCCcccCcC
Q 014891 376 NGYVYSTK-ALEEMAKK--NNGKITCPRTGLVCNYS 408 (416)
Q Consensus 376 ~G~V~s~~-al~~l~~~--~~~~~~CP~~~~~~~~~ 408 (416)
||..|... .|..=.+. +...+.||.|++.|...
T Consensus 8 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 43 (60)
T 2adr_A 8 CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR 43 (60)
T ss_dssp TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSH
T ss_pred CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence 67776544 33332222 23468999999999754
No 184
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=30.20 E-value=1.7e+02 Score=21.66 Aligned_cols=36 Identities=6% Similarity=0.247 Sum_probs=30.1
Q ss_pred cccccHHHHHH---HHHhhhHHHHHhHHHHHHHHHHhhh
Q 014891 47 FLRVPFEHYKK---TIRTNHRAVEKEITSVISNVADVSD 82 (416)
Q Consensus 47 ~~~vP~E~l~k---~fr~~qk~ieke~~~v~~~~~~l~~ 82 (416)
.++|.+|.|+. .|+.....|+..+..+...+..|..
T Consensus 6 ~i~v~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~ 44 (93)
T 4ioe_A 6 EIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEG 44 (93)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57899998886 7888888888899999888888864
No 185
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=30.08 E-value=17 Score=20.05 Aligned_cols=13 Identities=15% Similarity=0.174 Sum_probs=10.9
Q ss_pred eecCCCCcccCcC
Q 014891 396 ITCPRTGLVCNYS 408 (416)
Q Consensus 396 ~~CP~~~~~~~~~ 408 (416)
+.|+.|++.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1klr_A 3 YQCQYCEFRSADS 15 (30)
T ss_dssp CCCSSSSCCCSCS
T ss_pred ccCCCCCCccCCH
Confidence 6899999999754
No 186
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=29.88 E-value=47 Score=24.13 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=18.5
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSDNK 207 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~n~ 207 (416)
.+.+.+|+ +||++.|++|+=.|-
T Consensus 34 ~qA~kALKat~~NvErAaDWLFSH~ 58 (63)
T 1wgn_A 34 ECVLRAMKKKGENIEQILDYLFAHS 58 (63)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 45677886 799999999997763
No 187
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=29.51 E-value=20 Score=27.05 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=18.3
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSDNK 207 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~n~ 207 (416)
..++.+|+ +||++.|++|+-.+-
T Consensus 45 ~~~~~AL~~t~Gnve~Ave~L~~~~ 69 (74)
T 1vej_A 45 DANLQALVATDGDIHAAIEMLLGAS 69 (74)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 35777886 799999999997653
No 188
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=29.39 E-value=2.6e+02 Score=23.57 Aligned_cols=100 Identities=12% Similarity=0.193 Sum_probs=44.3
Q ss_pred CCCCCCCCCchhhhhcccccccccHHH--HHHHHHh---hhHHHHHhHHHHHHHHHHhhhc---CCCChhHHHHHHHHHH
Q 014891 28 MTPFPKLTQLTEALKLEHQFLRVPFEH--YKKTIRT---NHRAVEKEITSVISNVADVSDS---ENFSKDDAVNHLTSLV 99 (416)
Q Consensus 28 ~~~~~~~~~~~~~~~le~~~~~vP~E~--l~k~fr~---~qk~ieke~~~v~~~~~~l~~~---~~~~~~~~~~~l~~li 99 (416)
++||.++.....-...+||.+.-.=+. .+..|.. --|.+-.|++.|...|.+|... ...+..+. ..++
T Consensus 21 ~t~~~~~~~~~pDy~~~Yp~I~S~eqR~rYK~~F~~dy~EYk~Lhaev~~v~~~F~~Ld~~L~~l~~~s~e~----~~i~ 96 (140)
T 1xaw_A 21 TTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSVLDEINKELSRLDKELDDYREESEEY----MAAA 96 (140)
T ss_dssp -------------CTTTSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHH----HHHH
T ss_pred ccCCCCCCCCCCcHHHhCCCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH----HHHH
Confidence 344444444444466788887654321 2222221 2356677888888888888651 11222222 1234
Q ss_pred HHHHHHHH-HHHhhhHHHHHHHHHHHHHHHhhh
Q 014891 100 SRLQGLKR-KLEEGSRTEHLQAQKCRARLNHLE 131 (416)
Q Consensus 100 ~kl~~lkr-kl~~~~~~e~~~~~~~~~Rl~~L~ 131 (416)
..-+.+|+ |-.-...++.+-..-++..|.||+
T Consensus 97 ~EY~r~k~~K~dp~y~ekK~Rc~yL~~KLsHIK 129 (140)
T 1xaw_A 97 DEYNRLKQVKGSADYKSKKNHCKQLKSKLSHIK 129 (140)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 44444443 222333444444445566667765
No 189
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=29.24 E-value=23 Score=20.73 Aligned_cols=15 Identities=7% Similarity=-0.029 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 6 k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 6 RPFVCRICLSAFTTK 20 (35)
T ss_dssp SCEECSSSCCEESSH
T ss_pred cCeeCCCCCcccCCH
Confidence 458999999999754
No 190
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.06 E-value=20 Score=21.32 Aligned_cols=15 Identities=13% Similarity=0.235 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 8 RSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCEETTTTEECSSH
T ss_pred CCcCCCCCCCccCCH
Confidence 458999999999754
No 191
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=28.82 E-value=52 Score=23.02 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=23.5
Q ss_pred ccCCccccHHHH-HHHHH--hCCCceecCCCCcccCcC
Q 014891 374 LPNGYVYSTKAL-EEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 374 lp~G~V~s~~al-~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
--||..|...+- .+=.+ .+...++|+.|++.|...
T Consensus 8 ~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~ 45 (60)
T 4gzn_C 8 NFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQ 45 (60)
T ss_dssp TTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSH
T ss_pred CCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCH
Confidence 458888876553 33211 245679999999999754
No 192
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=34.67 E-value=12 Score=20.87 Aligned_cols=15 Identities=7% Similarity=-0.006 Sum_probs=11.9
Q ss_pred ceecCCCCcccCcCC
Q 014891 395 KITCPRTGLVCNYSD 409 (416)
Q Consensus 395 ~~~CP~~~~~~~~~~ 409 (416)
.++|++|++.|....
T Consensus 3 ~~~C~~C~k~f~~~~ 17 (30)
T 2lvr_A 3 PYVCIHCQRQFADPG 17 (30)
Confidence 378999999997544
No 193
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=28.28 E-value=51 Score=22.42 Aligned_cols=34 Identities=15% Similarity=0.019 Sum_probs=21.8
Q ss_pred cCCccccHH-HHHHHHHh----CCCceecCCCCcccCcC
Q 014891 375 PNGYVYSTK-ALEEMAKK----NNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~s~~-al~~l~~~----~~~~~~CP~~~~~~~~~ 408 (416)
-||..|... .|..=.+. +...++||.|++.|...
T Consensus 15 ~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~ 53 (66)
T 2drp_A 15 VCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK 53 (66)
T ss_dssp TTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCH
T ss_pred CCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCH
Confidence 477777644 34432222 34568999999999754
No 194
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=28.16 E-value=3.2e+02 Score=24.24 Aligned_cols=16 Identities=13% Similarity=0.061 Sum_probs=8.8
Q ss_pred cCChHHHHHHHHHhcc
Q 014891 232 GENNLRAITYARKYLA 247 (416)
Q Consensus 232 ~~~~~eAi~yar~~l~ 247 (416)
.|+..+|+.|.++-+.
T Consensus 168 ~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 168 NGYLKKGIDLFEQILK 183 (293)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 4555556655555444
No 195
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=28.11 E-value=4.3e+02 Score=26.16 Aligned_cols=58 Identities=3% Similarity=0.082 Sum_probs=30.4
Q ss_pred cHHH-HHHHHHhhhHHHHHhHHHHHHHHHHhhhc------C-----CCChhHHHHHHHHHHHHHHHHHHHH
Q 014891 51 PFEH-YKKTIRTNHRAVEKEITSVISNVADVSDS------E-----NFSKDDAVNHLTSLVSRLQGLKRKL 109 (416)
Q Consensus 51 P~E~-l~k~fr~~qk~ieke~~~v~~~~~~l~~~------~-----~~~~~~~~~~l~~li~kl~~lkrkl 109 (416)
.||. +.+.++.. +.+-+|++.+.+.+.++.+. . .-..+.+.++...|++.+..++..+
T Consensus 31 k~e~~V~~~l~~L-E~~l~elsn~ts~v~~Lvk~iq~~~~~~Q~~~~d~~e~~tq~skkml~~~~~~e~~~ 100 (409)
T 1m1j_C 31 KYRLTTDGELLEI-EGLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQLTQKSKKIIEEIIRYENTI 100 (409)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSCSSTTCCSSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHhcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 3454 56666666 33334565555555555431 0 1123445666667777766665433
No 196
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=28.08 E-value=43 Score=21.95 Aligned_cols=34 Identities=9% Similarity=0.114 Sum_probs=21.1
Q ss_pred cCCccccHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 014891 375 PNGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
-||..|.... |..=.+ .+...++||.|+..|...
T Consensus 9 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 45 (57)
T 3uk3_C 9 YCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQK 45 (57)
T ss_dssp TTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred CCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCH
Confidence 4777765443 332211 244569999999998754
No 197
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=27.52 E-value=3.2e+02 Score=24.07 Aligned_cols=60 Identities=8% Similarity=0.063 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhh
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDN 206 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n 206 (416)
.....++..+.+.|.++.|....++.--....+.+.+..+..+. ...|+.+.|+.++..-
T Consensus 155 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~--~~~~~~~~A~~~~~~a 214 (359)
T 3ieg_A 155 ELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLY--YQLGDHELSLSEVREC 214 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHH--HHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH--HHcCCHHHHHHHHHHH
Confidence 34455666677777776666655443111222333333333322 3356666666666544
No 198
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.40 E-value=26 Score=20.66 Aligned_cols=15 Identities=7% Similarity=-0.122 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 8 LLYDCHICERKFKNE 22 (36)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999998754
No 199
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=27.33 E-value=2.7e+02 Score=23.24 Aligned_cols=95 Identities=9% Similarity=-0.037 Sum_probs=56.8
Q ss_pred HHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHH---HhHHHH
Q 014891 150 LVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEF---QLRLQE 225 (416)
Q Consensus 150 I~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF---~Lr~q~ 225 (416)
++..+.+.|.++.|....+.. .+. ..+.+.+..+..+. ...|+.+.|+++++.--.. ...+..+.. ..+...
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~--~~~~~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~~~ 123 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKN-YNLANAYIGKSAAY--RDMKNNQEYIATLTEGIKA-VPGNATIEKLYAIYYLKE 123 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTT-CSHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhC-cchHHHHHHHHHHH--HHcccHHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHHH
Confidence 677888889888877765544 232 22344444444432 4579999999998765321 111221211 223333
Q ss_pred HHHHHhcCChHHHHHHHHHhccc
Q 014891 226 FIELVRGENNLRAITYARKYLAP 248 (416)
Q Consensus 226 fIELir~~~~~eAi~yar~~l~~ 248 (416)
-.-+...|+..+|+.+.++-+.-
T Consensus 124 g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 124 GQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTS
T ss_pred hHHHHHhccHHHHHHHHHHHHhc
Confidence 33445679999999999987653
No 200
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=27.23 E-value=3.1e+02 Score=23.88 Aligned_cols=95 Identities=19% Similarity=0.019 Sum_probs=43.4
Q ss_pred HHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccc----hHHHHhHHHH
Q 014891 150 LVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS----KFEFQLRLQE 225 (416)
Q Consensus 150 I~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S----~LeF~Lr~q~ 225 (416)
++..+.+.|.++.|..+.++.--....+...+..+.. -....|+++.|+.++..--....+.+. .-...++..-
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~--~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 242 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGV--VAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNL 242 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHH--HHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHH
Confidence 5555666666666655544431111222222222222 233467777777777655433221111 0001111112
Q ss_pred HHHHHhcCChHHHHHHHHHhc
Q 014891 226 FIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 226 fIELir~~~~~eAi~yar~~l 246 (416)
-.-+.+.|+..+|+.+.++-+
T Consensus 243 a~~~~~~g~~~~A~~~~~~a~ 263 (330)
T 3hym_B 243 GHVCRKLKKYAEALDYHRQAL 263 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHH
Confidence 222345677777777777554
No 201
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=33.24 E-value=13 Score=20.68 Aligned_cols=14 Identities=14% Similarity=0.254 Sum_probs=11.3
Q ss_pred eecCCCCcccCcCC
Q 014891 396 ITCPRTGLVCNYSD 409 (416)
Q Consensus 396 ~~CP~~~~~~~~~~ 409 (416)
+.|+.|++.|....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 3 CQCVMCGKAFTQAS 16 (29)
Confidence 68999999997543
No 202
>1wyy_A E2 glycoprotein; membrane fusion, severe acute respiratory syndrome, viral PR; 2.20A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1wnc_A 2fxp_A
Probab=27.16 E-value=2.8e+02 Score=23.38 Aligned_cols=87 Identities=16% Similarity=0.270 Sum_probs=42.7
Q ss_pred ccccHHHHHHHHHhhhHHHHHhHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHH----HHHHHHHHHhhhHHHHHHHHHH
Q 014891 48 LRVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSR----LQGLKRKLEEGSRTEHLQAQKC 123 (416)
Q Consensus 48 ~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~l~~li~k----l~~lkrkl~~~~~~e~~~~~~~ 123 (416)
+-+.-..|.+|.+..-..+.+-+.++...|..... ++.++..++.+ |+.+-..|...-..=...++.+
T Consensus 9 l~~~~~vL~~NQk~iA~sFN~A~~~~~~g~~tts~--------AL~kiQ~VVN~q~~aL~~l~~qL~~nFgAISssi~dI 80 (149)
T 1wyy_A 9 IGVTQNVLYENQKQIANQFNKAISQIQESLTTTST--------ALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDI 80 (149)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34555667777776666666666666665554432 34444444443 3333333433333333456667
Q ss_pred HHHHHhhhhcCchhhhhccHHHHHHHHHH
Q 014891 124 RARLNHLESADAENLAEWNNTRVKRILVD 152 (416)
Q Consensus 124 ~~Rl~~L~~~~~~~~~~w~~~~lnrlI~d 152 (416)
..|++.|.. ...+||+|--
T Consensus 81 y~rLd~leA----------daQVDRLItG 99 (149)
T 1wyy_A 81 LSRLDKVEA----------EVQIDRLITG 99 (149)
T ss_dssp HHHHHHHHH----------HC--------
T ss_pred HHHHHHHHH----------HHHHHHHHhc
Confidence 778888762 2356677743
No 203
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=27.14 E-value=62 Score=22.66 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=21.0
Q ss_pred cCCccccHHH-HHHHHH--hCCCceecCCCCcccCcC
Q 014891 375 PNGYVYSTKA-LEEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~s~~a-l~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
-||..|.... |.+=.+ .+...++|+.|++.|...
T Consensus 22 ~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~ 58 (74)
T 2lce_A 22 RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58 (74)
T ss_dssp TSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCH
T ss_pred CCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCH
Confidence 4777775443 333222 133568999999999754
No 204
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.14 E-value=56 Score=22.82 Aligned_cols=35 Identities=11% Similarity=0.271 Sum_probs=22.4
Q ss_pred ccCCccccHHHH-HHHHH--hCCCceecCCCCcccCcC
Q 014891 374 LPNGYVYSTKAL-EEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 374 lp~G~V~s~~al-~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
--||..|....- ..=.+ .+...++|++|++.|...
T Consensus 18 ~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~ 55 (72)
T 1x6e_A 18 VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 55 (72)
T ss_dssp SSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSH
T ss_pred CCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCH
Confidence 448888765543 33222 234569999999999754
No 205
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=27.14 E-value=3.3e+02 Score=27.94 Aligned_cols=17 Identities=47% Similarity=0.517 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHhhh
Q 014891 97 SLVSRLQGLKRKLEEGS 113 (416)
Q Consensus 97 ~li~kl~~lkrkl~~~~ 113 (416)
.|=.+++.||++++..+
T Consensus 114 ELRRrIqyLKekVdnQl 130 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKV 130 (562)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444555555554444
No 206
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.07 E-value=51 Score=24.93 Aligned_cols=59 Identities=10% Similarity=0.146 Sum_probs=40.5
Q ss_pred CCCCCCCchhhhcccCCCCCCCCCCC-eeeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 329 TKEDPLSQESFRKLASPLPYSKQHHS-KLVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 329 ~~~~P~c~~~~~~l~~~LP~~~~~hS-~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
...|+.|...+.+.+.-......+|. -|.|..-+..+...+ +...+|.+|++....++.
T Consensus 15 ~~~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~--~~~~~g~~yC~~~y~~~f 74 (91)
T 2d8y_A 15 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGT--YASLHGRIYCKPHFNQLF 74 (91)
T ss_dssp SCBCTTTCCBCCTTSEEECSSSEEETTTCBCTTTCCBCCTTT--CCCSSSCCCCHHHHHHHS
T ss_pred CCcCccCCCccCCceeEEECCCEECCCCCeeCCCCCCCCCCC--cEeECCEEECHHHHHHHh
Confidence 45688887766432221222345554 499999999887653 777899999999988774
No 207
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=27.04 E-value=57 Score=26.61 Aligned_cols=10 Identities=10% Similarity=0.418 Sum_probs=5.2
Q ss_pred eeeccccccc
Q 014891 356 LVCYITKELM 365 (416)
Q Consensus 356 ~~Cpis~~~~ 365 (416)
|.|++-+..+
T Consensus 51 ~~C~~C~k~F 60 (133)
T 2lt7_A 51 YPCRYCEKVF 60 (133)
T ss_dssp EECSSSSCEE
T ss_pred eeCCccCeec
Confidence 5555555444
No 208
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=26.93 E-value=56 Score=21.30 Aligned_cols=21 Identities=24% Similarity=0.333 Sum_probs=15.9
Q ss_pred HHHHHHh--cCChHHHHHHHHhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDN 206 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n 206 (416)
+.+.+|+ +||++.|++|+-.|
T Consensus 20 ~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 20 EAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTC
T ss_pred HHHHHHHHhCcCHHHHHHHHHcC
Confidence 4556665 68999999998654
No 209
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=26.80 E-value=3.4e+02 Score=26.50 Aligned_cols=22 Identities=5% Similarity=-0.213 Sum_probs=13.9
Q ss_pred HHHHHHHHHcChHHHHHHHHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAES 169 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~e 169 (416)
..++.-+.+.|.++.|..+.++
T Consensus 411 ~~l~~~~~~~g~~~~A~~~~~~ 432 (597)
T 2xpi_A 411 IGFAHSFAIEGEHDQAISAYTT 432 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 4556666777777766665543
No 210
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.66 E-value=56 Score=21.83 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=16.5
Q ss_pred HHHHHHHh-cCChHHHHHHHHhh
Q 014891 185 KKVIDALQ-NKEVAPALAWCSDN 206 (416)
Q Consensus 185 ~~I~~~L~-~gdl~~AL~W~~~n 206 (416)
.+.+.+|+ .||++.|++|+-.|
T Consensus 24 ~~a~~AL~~~~n~e~A~~~L~~h 46 (47)
T 2ekk_A 24 EHAMEALLNTSTMEQATEYLLTH 46 (47)
T ss_dssp HHHHHHHHHSCSHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHcC
Confidence 35666765 47999999998765
No 211
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=26.64 E-value=1.9e+02 Score=21.65 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=32.8
Q ss_pred HHhcCChHHHHHHHHhhhhhhhhccc--hHHHHhHHHHHHHHHhcCChHHHHHHHHHhc
Q 014891 190 ALQNKEVAPALAWCSDNKSRLKKSKS--KFEFQLRLQEFIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 190 ~L~~gdl~~AL~W~~~n~~~L~k~~S--~LeF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (416)
....|+...|+.|...--........ .-.-.++.+--.-+.+.|+..+|+.+.++-+
T Consensus 15 ~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 44678888888888776544432210 0111222222334456788999998888653
No 212
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=26.34 E-value=1.9e+02 Score=21.02 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHH
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRL 223 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~ 223 (416)
..-..++..+.+.|.++.|..+.+.. .+. ..+...+..+..+ ....|+.+.|+.++..--.. ...+. ..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~~~~~-~~~~~----~~~~ 84 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAA--YSKLGNYAGAVQDCERAICI-DPAYS----KAYG 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH-CTTCH----HHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHH--HHHhhchHHHHHHHHHHHhc-CccCH----HHHH
Confidence 34455677777888888777765543 221 2233333333332 35689999999998765432 11111 2222
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 014891 224 QEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (416)
.--.-+.+.|+..+|+.+.++-+.
T Consensus 85 ~~~~~~~~~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 85 RMGLALSSLNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHh
Confidence 222335567899999998886543
No 213
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=26.14 E-value=2.8e+02 Score=22.88 Aligned_cols=74 Identities=8% Similarity=0.184 Sum_probs=50.3
Q ss_pred HHHHhhhHHHHHhHHHHHHHHHHhhh---cCCCChhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Q 014891 57 KTIRTNHRAVEKEITSVISNVADVSD---SENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHL 130 (416)
Q Consensus 57 k~fr~~qk~ieke~~~v~~~~~~l~~---~~~~~~~~~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L 130 (416)
..|...++.+-+.+-.-.+.|..|-. .-+.+.++..+.|..+-+.++...+++.+.+.+-+..+.++..-+..+
T Consensus 53 ~~f~~~~~ela~dli~k~kqIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~i 129 (132)
T 1ykh_B 53 EEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDF 129 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36666666664433333333333322 123577888999999999999999999998888888888777666554
No 214
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=26.14 E-value=55 Score=23.63 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=20.3
Q ss_pred ccCCccccHHHH-HHHHH--hCCCceecCCCCcccCcC
Q 014891 374 LPNGYVYSTKAL-EEMAK--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 374 lp~G~V~s~~al-~~l~~--~~~~~~~CP~~~~~~~~~ 408 (416)
--||..|....- ..=.+ .+...+.|+.|+..|...
T Consensus 38 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 75 (90)
T 1a1h_A 38 RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARS 75 (90)
T ss_dssp TTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSH
T ss_pred CCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCH
Confidence 457777765443 22111 234557888888887643
No 215
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=26.00 E-value=2.9e+02 Score=23.04 Aligned_cols=95 Identities=9% Similarity=0.015 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHH
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRL 223 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~ 223 (416)
.+-..++..+.+.|.++.|....++. .+. ..+...+..+..+ .+..|+++.|+.++..--.. ..... ..+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~--~~~~~~~~~A~~~~~~al~~---~~~~~--~~~~ 211 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAA--LAKLMSFPEAIADCNKAIEK---DPNFV--RAYI 211 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH---CTTCH--HHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cccHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHh---CHHHH--HHHH
Confidence 44556788888889888877765543 221 2233444433333 35689999999998765321 11112 2222
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 014891 224 QEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (416)
..-.-+.+.|+..+|+.+.++-+.
T Consensus 212 ~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 212 RKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 233345567899999998887654
No 216
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=25.96 E-value=14 Score=26.15 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=11.1
Q ss_pred CceecCCCCcccCcCCcee
Q 014891 394 GKITCPRTGLVCNYSDLVK 412 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~~~k 412 (416)
...+||.|+.. .+++++
T Consensus 35 ~dw~CP~Cg~~--K~~F~~ 51 (54)
T 4rxn_A 35 DDWVCPLCGVG--KDEFEE 51 (54)
T ss_dssp TTCBCTTTCCB--GGGEEE
T ss_pred CCCcCcCCCCc--HHHceE
Confidence 35799999974 444443
No 217
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.81 E-value=30 Score=21.18 Aligned_cols=15 Identities=13% Similarity=0.275 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..+.|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQK 24 (42)
T ss_dssp CSBCCTTTTCCBSSH
T ss_pred CCeeCCCccchhCCH
Confidence 458999999999754
No 218
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=25.69 E-value=11 Score=24.19 Aligned_cols=14 Identities=21% Similarity=0.399 Sum_probs=10.1
Q ss_pred eecCCCCcccCcCC
Q 014891 396 ITCPRTGLVCNYSD 409 (416)
Q Consensus 396 ~~CP~~~~~~~~~~ 409 (416)
|.||.|.+.+.-.+
T Consensus 6 FiCP~C~~~l~s~~ 19 (34)
T 3mjh_B 6 FICPQCMKSLGSAD 19 (34)
T ss_dssp EECTTTCCEESSHH
T ss_pred cCCcHHHHHcCCHH
Confidence 78888888775443
No 219
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=25.65 E-value=28 Score=21.37 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 9 k~~~C~~C~k~f~~~ 23 (42)
T 2el5_A 9 NPYECSECGKAFNRK 23 (42)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCccCCCcChhhCCH
Confidence 468999999999754
No 220
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=25.57 E-value=2.3e+02 Score=21.83 Aligned_cols=95 Identities=9% Similarity=-0.007 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHH
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRL 223 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~ 223 (416)
..-..++..+++.|.++.|....+.. .+. ..+.+.+..+.. -.+..|+++.|+.++..--.. .. ... ..+.
T Consensus 14 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~a~~~-~~--~~~--~~~~ 85 (166)
T 1a17_A 14 EELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSL--AYLRTECYGYALGDATRAIEL-DK--KYI--KGYY 85 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHH-CT--TCH--HHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHHHH--HHHHcCCHHHHHHHHHHHHHh-Cc--ccH--HHHH
Confidence 44456777788888888877765443 221 223333333322 235689999999998765332 11 111 2222
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 014891 224 QEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (416)
..-.-+.+.|+..+|+.+.++-+.
T Consensus 86 ~~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 86 RRAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHH
Confidence 233345567999999999987654
No 221
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=25.55 E-value=23 Score=20.77 Aligned_cols=13 Identities=23% Similarity=0.317 Sum_probs=10.9
Q ss_pred eecCCCCcccCcC
Q 014891 396 ITCPRTGLVCNYS 408 (416)
Q Consensus 396 ~~CP~~~~~~~~~ 408 (416)
+.|+.|++.|...
T Consensus 3 ~~C~~C~k~F~~~ 15 (33)
T 1rim_A 3 FACPECPKRFMRS 15 (33)
T ss_dssp CCCSSSCCCCSSH
T ss_pred ccCCCCCchhCCH
Confidence 6899999999754
No 222
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=25.52 E-value=4.4e+02 Score=26.92 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=46.8
Q ss_pred cccHHHHHHHHHhhhHHHHHhHHHHHHHHHHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHhhhHH-------------
Q 014891 49 RVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRT------------- 115 (416)
Q Consensus 49 ~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~l~~li~kl~~lkrkl~~~~~~------------- 115 (416)
.+-||.|||+.-+.-+.+ .-.|.+.+.++.+ ....++.+.|+.++..+..+++.|......
T Consensus 47 ~~~~e~~~~~~~~~~~e~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~g~~~~r~~ 120 (526)
T 2de0_X 47 GKDHEILRRRIENGAKEL---WFFLQSELKKLKN---LEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWREK 120 (526)
T ss_dssp CHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHH
T ss_pred ChHHHHHHHHHHHhHHHH---HHHHHHHHHHhhc---cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Confidence 456888888655444444 3344444555544 346677778888888888888877543311
Q ss_pred HH-HHHHHHHHHHHhhhh
Q 014891 116 EH-LQAQKCRARLNHLES 132 (416)
Q Consensus 116 e~-~~~~~~~~Rl~~L~~ 132 (416)
+. .+....++||+.++.
T Consensus 121 ~~~~lt~~vq~~i~~~Qn 138 (526)
T 2de0_X 121 EAKDLTELVQRRITYLQN 138 (526)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 11 334555677777763
No 223
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.51 E-value=61 Score=23.18 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=19.4
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhhhh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSDNKSR 209 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~n~~~ 209 (416)
.+.+.+|+ .+|++.|++|+-.|...
T Consensus 24 ~~a~~AL~~t~~nve~A~e~L~~~~~d 50 (63)
T 2dak_A 24 DQALKALRATNNSLERAVDWIFSHIDD 50 (63)
T ss_dssp HHHHHHHHHTTSCSHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 35667776 57899999999888654
No 224
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=25.46 E-value=29 Score=21.00 Aligned_cols=15 Identities=13% Similarity=0.060 Sum_probs=12.1
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 5 k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 5 RSYTCSFCKREFRSA 19 (39)
T ss_dssp SSEECTTTCCEESSH
T ss_pred CceECCCCCcccCCH
Confidence 458999999999754
No 225
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=25.36 E-value=65 Score=27.41 Aligned_cols=72 Identities=13% Similarity=0.033 Sum_probs=46.1
Q ss_pred CCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcC
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~ 408 (416)
..|..|...+..-.+---....+|.. |.|..-++.+++.. + .-.|.+|++..-.++.. .+|..|++.....
T Consensus 7 ~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~--f-~~~g~~yC~~~y~~~f~-----~~C~~C~~~I~~~ 78 (169)
T 2rgt_A 7 PMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERC--F-SRGESVYCKDDFFKRFG-----TKCAACQLGIPPT 78 (169)
T ss_dssp CBBSSSSSBCCSSSCEECSSCEECTTTSBCTTTCCBCCSCC--E-ESSSCEECHHHHHHHHS-----CBCTTTCCBCCTT
T ss_pred CccccCCCccCCcEEEEECCcEEccccCccCCCCCcCCCCC--c-ccCCeeeeccccccccc-----ccccccccccCCC
Confidence 34666665543211100123455644 99999999998754 5 46999999999887752 4788887766554
Q ss_pred C
Q 014891 409 D 409 (416)
Q Consensus 409 ~ 409 (416)
+
T Consensus 79 ~ 79 (169)
T 2rgt_A 79 Q 79 (169)
T ss_dssp S
T ss_pred c
Confidence 3
No 226
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=25.22 E-value=43 Score=29.00 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=39.0
Q ss_pred CCCCCCCchhhhcccCCC-CCCCCCCC-eeeecccccccCCCCCceeccCCccccHHHHHHH
Q 014891 329 TKEDPLSQESFRKLASPL-PYSKQHHS-KLVCYITKELMDTENPPQVLPNGYVYSTKALEEM 388 (416)
Q Consensus 329 ~~~~P~c~~~~~~l~~~L-P~~~~~hS-~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l 388 (416)
...|..|...+.+-+.-+ .....+|. -|.|..-+..+...+..+...+|++|++....++
T Consensus 119 ~~kC~~C~~~I~~~~~v~~a~~~~~H~~CF~C~~C~~~L~~g~~f~~~~~g~~yC~~cy~~~ 180 (182)
T 2jtn_A 119 GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETA 180 (182)
T ss_dssp SCCCTTTCCCCCSSCCCCEETTEECCTTTCCCTTTCCCCCTTCEEEECTTSCEECHHHHHHH
T ss_pred ccccccCCCccCCCceEEecCCCCEEeCCCcCCCCCCCCCCCCceEEccCCEEECHHHHHHh
Confidence 456777766554322111 12244554 4999999999876555556789999999887765
No 227
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=25.18 E-value=50 Score=25.41 Aligned_cols=27 Identities=22% Similarity=0.273 Sum_probs=20.6
Q ss_pred HHHHHHh--cCChHHHHHHHHhhhhhhhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDNKSRLKK 212 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n~~~L~k 212 (416)
+.+.+|. ++|++.|++|+-+|...+.+
T Consensus 37 ~a~~AL~~~n~n~e~A~ewL~~h~~D~D~ 65 (85)
T 2dkl_A 37 PAEEALKSNNMNLDQAMSALLEKKVDVDK 65 (85)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHTTSCCSSC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHCcCCccc
Confidence 3556665 58899999999999776654
No 228
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.13 E-value=74 Score=21.93 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=22.5
Q ss_pred ccCCccccHHHH-HHHHHh--CCCceecCCCCcccCcC
Q 014891 374 LPNGYVYSTKAL-EEMAKK--NNGKITCPRTGLVCNYS 408 (416)
Q Consensus 374 lp~G~V~s~~al-~~l~~~--~~~~~~CP~~~~~~~~~ 408 (416)
--||..|....- ..=.+. +...++|++|++.|...
T Consensus 13 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~ 50 (70)
T 1x5w_A 13 SECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP 50 (70)
T ss_dssp SSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSH
T ss_pred CCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCH
Confidence 448888875543 332222 23458999999999754
No 229
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.00 E-value=31 Score=21.35 Aligned_cols=15 Identities=13% Similarity=0.140 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 11 KPYECNECQKAFNTK 25 (44)
T ss_dssp CSEECTTTCCEESCH
T ss_pred CCeECCCCCcccCCH
Confidence 468999999999754
No 230
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.80 E-value=51 Score=23.45 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=39.0
Q ss_pred CCCCCCchhhhcccCCC-CCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 330 KEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~L-P~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
..|+.|...+.+-..-+ .....+|.. |.|..-+..++.. ++...+|.+|.+..-.++.
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~cy~~~f 65 (72)
T 1wyh_A 6 SGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSR--SFVPDKGAHYCVPCYENKF 65 (72)
T ss_dssp CBCSSSCCBCCSSSCEECSTTCCEETTTCBCTTTCCBTTTS--CEEEETTEEEEHHHHHHHT
T ss_pred CCCccCCCccccCccEEEECccccCcccCeECCCCCcCCCC--ccCCcCCeEECHHHHHHHc
Confidence 45777777655321111 123456654 9999999998764 5778899999998887663
No 231
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.73 E-value=30 Score=21.10 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 9 k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 9 RVYECQECGKSFRQK 23 (41)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCCcCCH
Confidence 458999999999754
No 232
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.72 E-value=32 Score=21.02 Aligned_cols=16 Identities=6% Similarity=0.154 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 9 k~~~C~~C~k~f~~~~ 24 (42)
T 2yte_A 9 KPYSCAECKETFSDNN 24 (42)
T ss_dssp CSCBCTTTCCBCSSHH
T ss_pred CCeECCCCCCccCCHH
Confidence 4589999999997543
No 233
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.70 E-value=26 Score=21.02 Aligned_cols=15 Identities=7% Similarity=0.000 Sum_probs=12.1
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 8 k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 8 HLYYCSQCHYSSITK 22 (37)
T ss_dssp CEEECSSSSCEEECH
T ss_pred cCeECCCCCcccCCH
Confidence 458999999998654
No 234
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.69 E-value=76 Score=23.19 Aligned_cols=34 Identities=12% Similarity=0.211 Sum_probs=20.8
Q ss_pred cCCccccHHH-HHHHHHh--CCCceecCCCCcccCcC
Q 014891 375 PNGYVYSTKA-LEEMAKK--NNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~s~~a-l~~l~~~--~~~~~~CP~~~~~~~~~ 408 (416)
-||..|.... |.+=.+. +...++|+.|++.|...
T Consensus 41 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 77 (96)
T 2dmd_A 41 TCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS 77 (96)
T ss_dssp SSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred CCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence 3777775443 3332222 33468999999999754
No 235
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.68 E-value=31 Score=21.71 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cCeECCCCCcccCCHH
Confidence 4589999999997543
No 236
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=24.68 E-value=17 Score=25.80 Aligned_cols=10 Identities=30% Similarity=0.737 Sum_probs=8.1
Q ss_pred ceecCCCCcc
Q 014891 395 KITCPRTGLV 404 (416)
Q Consensus 395 ~~~CP~~~~~ 404 (416)
..+||.|+..
T Consensus 36 dw~CP~Cga~ 45 (55)
T 2v3b_B 36 DWVCPDCGVG 45 (55)
T ss_dssp TCCCTTTCCC
T ss_pred CCcCCCCCCC
Confidence 4699999973
No 237
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=24.49 E-value=2.2e+02 Score=21.23 Aligned_cols=92 Identities=10% Similarity=0.001 Sum_probs=54.6
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~f 226 (416)
...+..+++.|.++.|....++. .+. ..+...+..+..+ .+..|+++.|++++..--. +...+. ..+...-
T Consensus 8 ~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~--~~~~~~~~~A~~~~~~al~-~~p~~~----~~~~~lg 79 (126)
T 3upv_A 8 RLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAA--LAKLMSFPEAIADCNKAIE-KDPNFV----RAYIRKA 79 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCTTCH----HHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHH--HHHhcCHHHHHHHHHHHHH-hCCCcH----HHHHHHH
Confidence 34567778888887777665443 222 2234444433333 3467999999999876532 222222 2233333
Q ss_pred HHHHhcCChHHHHHHHHHhcc
Q 014891 227 IELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 227 IELir~~~~~eAi~yar~~l~ 247 (416)
.-+...|+..+|+.+.++-+.
T Consensus 80 ~~~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 80 TAQIAVKEYASALETLDAART 100 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHH
Confidence 445667999999999887654
No 238
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=24.48 E-value=2.4e+02 Score=21.70 Aligned_cols=92 Identities=15% Similarity=0.064 Sum_probs=56.2
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~f 226 (416)
+-.+.-+++.|.++.|...-++. .+. +.+.+.+..+..+. +..|+++.|++++..-- .+...+.. .+...-
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~--~~~~~~~~A~~~~~~al-~~~p~~~~----a~~~lg 88 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACL--TKLMEFQRALDDCDTCI-RLDSKFIK----GYIRKA 88 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHH-HHCTTCHH----HHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHH--HhhccHHHHHHHHHHHH-HhhhhhhH----HHHHHH
Confidence 34578888999888877665443 232 23445544444333 45799999999987542 22222222 233333
Q ss_pred HHHHhcCChHHHHHHHHHhcc
Q 014891 227 IELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 227 IELir~~~~~eAi~yar~~l~ 247 (416)
.-+...|+..+|+.+.++-+.
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHH
Confidence 445667999999999987543
No 239
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=24.25 E-value=2.3e+02 Score=21.32 Aligned_cols=105 Identities=16% Similarity=-0.000 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHcChHHHHHHHHHHh-CCC-CcccHHH--HHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccc-hHH
Q 014891 144 TRVKRILVDYMLRMSYYETAEKLAESS-NIQ-DLVDIEV--FQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS-KFE 218 (416)
Q Consensus 144 ~~lnrlI~dyLlR~Gy~etA~~l~~es-gi~-~~~d~~~--f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S-~Le 218 (416)
..+-..++..+...|.++.|....++. .+. ...+... ..-...-.-....|+.+.|++++..--....+.+. ...
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 345567788888889887777665433 110 0111111 11122222234589999999999876555444322 222
Q ss_pred HHhHHHHHHHHHhcCChHHHHHHHHHhccc
Q 014891 219 FQLRLQEFIELVRGENNLRAITYARKYLAP 248 (416)
Q Consensus 219 F~Lr~q~fIELir~~~~~eAi~yar~~l~~ 248 (416)
......--.-+...|+..+|+.+.++-+.-
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 222333333445678999999998876543
No 240
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.18 E-value=31 Score=21.12 Aligned_cols=15 Identities=13% Similarity=0.129 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2en2_A 10 KPYKCETCGARFVQV 24 (42)
T ss_dssp CSEECTTTCCEESSH
T ss_pred CCEeCCCcChhhCCH
Confidence 458999999999754
No 241
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=24.10 E-value=18 Score=27.96 Aligned_cols=72 Identities=10% Similarity=0.032 Sum_probs=48.3
Q ss_pred CCCCCCchhhhc--ccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccC
Q 014891 330 KEDPLSQESFRK--LASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCN 406 (416)
Q Consensus 330 ~~~P~c~~~~~~--l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~ 406 (416)
..|+.|...+.+ ..+.. ....+|.. |.|..-+..++ +.++...+|.+|.+..-.++. ..+|..|++...
T Consensus 6 ~~C~~C~~~I~~~~~~~~a-~~~~~H~~CF~C~~C~~~L~--~~~~~~~~g~~yC~~cy~~~~-----~~~C~~C~~~I~ 77 (101)
T 2cup_A 6 SGCVECRKPIGADSKEVHY-KNRFWHDTCFRCAKCLHPLA--NETFVAKDNKILCNKCTTRED-----SPKCKGCFKAIV 77 (101)
T ss_dssp CBCSSSCCBCCSSSCEEEE-TTEEEETTTCCCSSSCCCTT--SSCCEEETTEEECHHHHTTCC-----CCBCSSSCCBCC
T ss_pred CcCcccCCcccCCceEEEE-CccChhhcCCcccccCCCCC--cCeeECcCCEEEChhHhhhhc-----CCccccCCCccc
Confidence 457777665532 11111 12345555 99999999985 346778899999998886542 359999999887
Q ss_pred cCC
Q 014891 407 YSD 409 (416)
Q Consensus 407 ~~~ 409 (416)
..+
T Consensus 78 ~~~ 80 (101)
T 2cup_A 78 AGD 80 (101)
T ss_dssp SSS
T ss_pred cCC
Confidence 543
No 242
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.06 E-value=31 Score=21.72 Aligned_cols=15 Identities=13% Similarity=0.224 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 11 RHYECSECGKAFIQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCCCCCCCCcccCCH
Confidence 468999999999754
No 243
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.03 E-value=85 Score=20.54 Aligned_cols=34 Identities=15% Similarity=-0.007 Sum_probs=21.2
Q ss_pred ccCCccccHHH-HHHHHH-h--CCCceecCCCCcccCc
Q 014891 374 LPNGYVYSTKA-LEEMAK-K--NNGKITCPRTGLVCNY 407 (416)
Q Consensus 374 lp~G~V~s~~a-l~~l~~-~--~~~~~~CP~~~~~~~~ 407 (416)
--||..|.... |.+-.+ . +...++|+.|++.|.-
T Consensus 16 ~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 16 QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp SSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred CCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence 34777775544 443322 1 2345899999999863
No 244
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=23.92 E-value=16 Score=24.92 Aligned_cols=30 Identities=20% Similarity=0.395 Sum_probs=15.9
Q ss_pred ccCCccccHHHHH--HHHHhCCCceecCCCCcc
Q 014891 374 LPNGYVYSTKALE--EMAKKNNGKITCPRTGLV 404 (416)
Q Consensus 374 lp~G~V~s~~al~--~l~~~~~~~~~CP~~~~~ 404 (416)
.-||+||..+.=. .+. .--...+||.|+..
T Consensus 8 ~vCGyvyd~~~Gd~t~f~-~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 8 NVCGYEYDPAEHDNVPFD-QLPDDWCCPVCGVS 39 (46)
T ss_dssp TTTCCEECGGGGTTCCGG-GSCTTCBCTTTCCB
T ss_pred CCCCeEEeCCcCCCcchh-hCCCCCcCcCCCCc
Confidence 4577777643110 010 11234699999964
No 245
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=23.87 E-value=67 Score=20.24 Aligned_cols=18 Identities=22% Similarity=0.339 Sum_probs=13.6
Q ss_pred HHHHHHh--cCChHHHHHHH
Q 014891 186 KVIDALQ--NKEVAPALAWC 203 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~ 203 (416)
+.+.+|+ +||++.|++|+
T Consensus 20 ~a~~AL~~~~~n~e~A~~~L 39 (40)
T 1z96_A 20 EAAQALDAANGDLDVAASFL 39 (40)
T ss_dssp HHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHH
Confidence 3555665 68999999996
No 246
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.86 E-value=32 Score=21.50 Aligned_cols=15 Identities=13% Similarity=0.295 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 11 KPYECNECGKAFIWK 25 (44)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCcccCch
Confidence 468999999999754
No 247
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=23.75 E-value=4.3e+02 Score=25.70 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHcChH-HHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhH
Q 014891 145 RVKRILVDYMLRMSYY-ETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~-etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr 222 (416)
..-..++..+.+.|.+ +.|....++. .+. ..+.+.+..+..+. ...|+++.|++++..--. .+.. ...+
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~--~~~g~~~~A~~~~~~al~----~~p~--~~~~ 173 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVY--WKKGDVTSAHTCFSGALT----HCKN--KVSL 173 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHH--HHHTCHHHHHHHHHHHHT----TCCC--HHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHH--HHcCCHHHHHHHHHHHHh----hCCC--HHHH
Confidence 4445667777788877 7776665443 222 22344444444333 346899999988865422 2222 1333
Q ss_pred HHHHHHHHhc---------CChHHHHHHHHHhcc
Q 014891 223 LQEFIELVRG---------ENNLRAITYARKYLA 247 (416)
Q Consensus 223 ~q~fIELir~---------~~~~eAi~yar~~l~ 247 (416)
..--.-+... |+..+|+.+.++-+.
T Consensus 174 ~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 207 (474)
T 4abn_A 174 QNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ 207 (474)
T ss_dssp HHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH
Confidence 3333334445 778888888886543
No 248
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.59 E-value=64 Score=21.90 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=17.7
Q ss_pred HHHHHHHh--cCChHHHHHHHHhh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSDN 206 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~n 206 (416)
.+++.+|+ .||++.|++|+-.+
T Consensus 23 ~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 23 ERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 36888887 58999999998654
No 249
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=23.59 E-value=2.9e+02 Score=22.21 Aligned_cols=103 Identities=10% Similarity=-0.050 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHcChHHHHHHHHHHh-----CCCCcccHHHHHHHHHH-HHHHhcCChHHHHHHHHhhhhhhhhcc-c
Q 014891 143 NTRVKRILVDYMLRMSYYETAEKLAESS-----NIQDLVDIEVFQEAKKV-IDALQNKEVAPALAWCSDNKSRLKKSK-S 215 (416)
Q Consensus 143 ~~~lnrlI~dyLlR~Gy~etA~~l~~es-----gi~~~~d~~~f~~~~~I-~~~L~~gdl~~AL~W~~~n~~~L~k~~-S 215 (416)
....-..++..+.+.|.++.|..+.++. ...+ +.....-...+ .-....|+.+.|++++.+--....+.+ .
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD--HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 3455567788888889888776665433 1111 11111112222 223458999999999988766655544 2
Q ss_pred h-HHHHhHHHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 216 K-FEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 216 ~-LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
. .....+..--.-+...|+..+|+.+.++-+.
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2 3333333333445567999999999887654
No 250
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.56 E-value=36 Score=21.14 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CSEECSSSSCEESSSH
T ss_pred CCeECCCCCchhCCHH
Confidence 4589999999997653
No 251
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.53 E-value=32 Score=21.58 Aligned_cols=15 Identities=13% Similarity=0.131 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yts_A 11 KPYICNECGKSFIQK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCEECCCCChhhCCh
Confidence 468999999999754
No 252
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=23.49 E-value=23 Score=30.95 Aligned_cols=57 Identities=14% Similarity=0.214 Sum_probs=42.3
Q ss_pred CCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHHHhCCCceecCCCCcccCcCC
Q 014891 350 KQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMAKKNNGKITCPRTGLVCNYSD 409 (416)
Q Consensus 350 ~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~~~~~ 409 (416)
..+|.. |.|..-+..+++...++....|.+|++..-.++.. .+-+|+.|++.....+
T Consensus 26 ~~wH~~CF~C~~C~~~L~~~g~~~~~~~g~~yC~~cy~~~~~---~~~~C~~C~~~I~~~e 83 (188)
T 1rut_X 26 SYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG---NSGACSACGQSIPASE 83 (188)
T ss_dssp EEECGGGCBCTTTCCBHHHHCSEEEEETTEEECHHHHHHHHS---CCEECTTTCCEECTTS
T ss_pred cEecccCcccCCCCcccccCCceEEEeCCccccccccccccc---cCCccccCCCccccCc
Confidence 455654 99999998887534467788999999999888742 1237999998876543
No 253
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.47 E-value=68 Score=23.09 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=18.2
Q ss_pred HHHHHHh--cCChHHHHHHHHhhhh
Q 014891 186 KVIDALQ--NKEVAPALAWCSDNKS 208 (416)
Q Consensus 186 ~I~~~L~--~gdl~~AL~W~~~n~~ 208 (416)
+.+.+|+ ++|++.|++|+-.+..
T Consensus 25 ~a~~AL~~~~~nve~A~e~L~~~~~ 49 (63)
T 1wji_A 25 ASRQALMDNGNNLEAALNVLLTSNK 49 (63)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHSS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 4667776 6899999999988754
No 254
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.43 E-value=34 Score=21.45 Aligned_cols=15 Identities=13% Similarity=0.222 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eow_A 11 KPYKCNECGKAFRAR 25 (46)
T ss_dssp CCEECTTSCCEESSH
T ss_pred CCeeccccCChhcCH
Confidence 458999999999754
No 255
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.42 E-value=34 Score=21.48 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 11 NPFICSECGKVFTHK 25 (46)
T ss_dssp CSCBCTTTCCBCSSH
T ss_pred CCEECCccCcccCCH
Confidence 458999999999754
No 256
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=23.40 E-value=2.6e+02 Score=21.68 Aligned_cols=14 Identities=7% Similarity=0.003 Sum_probs=7.0
Q ss_pred hcCChHHHHHHHHh
Q 014891 192 QNKEVAPALAWCSD 205 (416)
Q Consensus 192 ~~gdl~~AL~W~~~ 205 (416)
..|+.+.|+.++..
T Consensus 54 ~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 54 KTGAVDRGTELLER 67 (186)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHH
Confidence 34555555555443
No 257
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=23.40 E-value=3.8e+02 Score=23.53 Aligned_cols=60 Identities=12% Similarity=-0.035 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhh
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDN 206 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n 206 (416)
.....++..+...|.++.|..+.++.--....+.+.+..+..+ .+..|+++.|++++...
T Consensus 121 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~A~~~~~~~ 180 (359)
T 3ieg_A 121 QRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAEC--FIKEGEPRKAISDLKAA 180 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHH--HHHCCCHHHHHHHHHHH
Confidence 3445567888899998888877665411112233333333332 34579999999888764
No 258
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.35 E-value=54 Score=24.07 Aligned_cols=60 Identities=12% Similarity=0.193 Sum_probs=36.9
Q ss_pred ccCCCCCCCCCCchhhhcccCCCC-CCCCCCCe-eeecccccccCCCCCceeccCCccccHHHH
Q 014891 324 YEDDCTKEDPLSQESFRKLASPLP-YSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKAL 385 (416)
Q Consensus 324 ~~~~~~~~~P~c~~~~~~l~~~LP-~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al 385 (416)
|.......|..|...+.+-..-+- ....+|.. |.|..-+..+++. ++...+|.+|.+..-
T Consensus 10 y~~~~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~--~f~~~~~~~~C~~c~ 71 (82)
T 2ehe_A 10 YDNTFANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADE--PFTCQDSELLCNDCY 71 (82)
T ss_dssp CCCCCSCBCTTTCCBCCSSCCBCCCSSCCCBTTTSBCTTTCCBCSSC--CEEEETTEEEETTTS
T ss_pred hCcccCCcCccCCCccccCcEEEEeCCccccccCCeecCCCCccCCC--ccEeeCCEEECHHHH
Confidence 444444578888776653121121 23455655 9999999998743 566777887775543
No 259
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=23.27 E-value=73 Score=22.93 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=19.4
Q ss_pred HHHHHHHh---cCChHHHHHHHHhhhhh
Q 014891 185 KKVIDALQ---NKEVAPALAWCSDNKSR 209 (416)
Q Consensus 185 ~~I~~~L~---~gdl~~AL~W~~~n~~~ 209 (416)
.+++.+|+ ++|++.|++|+-+|...
T Consensus 24 ~~a~~AL~~t~~~nve~A~ewLl~~~~d 51 (64)
T 1whc_A 24 GRAEKALALTGNQGIEAAMDWLMEHEDD 51 (64)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhCCCC
Confidence 35677776 58999999999888653
No 260
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=23.21 E-value=2.9e+02 Score=22.07 Aligned_cols=96 Identities=14% Similarity=-0.015 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHH
Q 014891 145 RVKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQ 224 (416)
Q Consensus 145 ~lnrlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q 224 (416)
.....++..+...|.++.|.......--....+.+.+..+..+ ....|+++.|+++++.--. +...+... +..
T Consensus 74 ~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~--~~~~g~~~~A~~~~~~~l~-~~p~~~~~----~~~ 146 (184)
T 3vtx_A 74 EAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLV--YDSMGEHDKAIEAYEKTIS-IKPGFIRA----YQS 146 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCTTCHHH----HHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH--HHHhCCchhHHHHHHHHHH-hcchhhhH----HHH
Confidence 3445567777788877777766544321122244444443333 3457999999998875421 11112222 222
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 014891 225 EFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (416)
--.-+.+.|+..+|+.+.++-+.
T Consensus 147 lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 147 IGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHh
Confidence 23345677999999999887553
No 261
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.14 E-value=33 Score=21.55 Aligned_cols=15 Identities=13% Similarity=0.222 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 11 KPYKCNECGKAFRAH 25 (46)
T ss_dssp CCCCCTTTTCCCSSH
T ss_pred CCeECCcCChhhCCH
Confidence 468999999999754
No 262
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.14 E-value=95 Score=22.50 Aligned_cols=64 Identities=14% Similarity=0.227 Sum_probs=42.0
Q ss_pred cccCCCCCCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 323 CYEDDCTKEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 323 c~~~~~~~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
||.......|+.|...+.+-.+. .....+|.. |.|..-+..++.. .+...+|.+|.+....++.
T Consensus 9 cy~~~~~~~C~~C~~~I~~~~v~-a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~cy~~~f 73 (80)
T 2cuq_A 9 CYENKFAPRCARCSKTLTQGGVT-YRDQPWHRECLVCTGCQTPLAGQ--QFTSRDEDPYCVACFGELF 73 (80)
T ss_dssp CCCCCSSCCCTTTCCCCCSCCEE-SSSSEECTTTCBCSSSCCBCTTC--CEEECSSSEEEHHHHHHHT
T ss_pred HHccccCCcCCCCCCEecCcEEE-ECCchhhhhhCCcccCCCcCCCC--eeEeECCEEECHHHHHHHc
Confidence 34433346788887765431111 123455654 9999999999643 5778999999998887763
No 263
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.12 E-value=31 Score=21.33 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=12.6
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..+.|++|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 11 KPYVCNECGKAFRSKS 26 (44)
T ss_dssp SSSCCTTTCCCCSSHH
T ss_pred cCeECCCCCCccCCHH
Confidence 4589999999997543
No 264
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=23.08 E-value=27 Score=28.57 Aligned_cols=59 Identities=10% Similarity=0.086 Sum_probs=38.1
Q ss_pred CCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHH
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEM 388 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l 388 (416)
..|+.|...+..-.+-.-....+|.- |.|...+..+.+....+...+|.+|++..-.++
T Consensus 62 ~~C~~C~~~I~~~~~v~a~~~~wH~~CF~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~~ 121 (123)
T 2l4z_A 62 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRL 121 (123)
T ss_dssp SBBSSSSSBCCSSSEEEETTEEEETTTSBCTTTCCBGGGTTCCCBCSSSCCBCHHHHHHH
T ss_pred CcCcCCCCCcCCcEEEEeCCcEEcccccCcCcCCCcccccCCceEEECCEEeCHHHhhhh
Confidence 45777776544211000112455654 999999999975444677889999999877654
No 265
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.95 E-value=54 Score=23.91 Aligned_cols=63 Identities=8% Similarity=-0.016 Sum_probs=41.1
Q ss_pred ccCCCCCCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 324 YEDDCTKEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 324 ~~~~~~~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
|.......|+.|...+.+-.+. .....+|.. |.|..-+..++.. .+...+|.+|.+..-.++.
T Consensus 10 y~~~~~~~C~~C~~~I~~~~v~-a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~~y~~~f 73 (80)
T 1x3h_A 10 FLAMFSPKCGGCNRPVLENYLS-AMDTVWHPECFVCGDCFTSFSTG--SFFELDGRPFCELHYHHRR 73 (80)
T ss_dssp CCCCCSCBCTTTCCBCCSSCEE-ETTEEECTTTCBCSSSCCBSCSS--CCEESSSCEECHHHHHHHH
T ss_pred HhhhcCCccccCCCeecceeEE-ECCCeEecCcCChhhCCCCCCCC--cEEeECCEEECHHHHHHHc
Confidence 4333345688887765531111 112445644 9999999999764 3667799999998887764
No 266
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=22.94 E-value=17 Score=25.47 Aligned_cols=10 Identities=30% Similarity=0.624 Sum_probs=8.1
Q ss_pred ceecCCCCcc
Q 014891 395 KITCPRTGLV 404 (416)
Q Consensus 395 ~~~CP~~~~~ 404 (416)
..+||.|+..
T Consensus 35 dw~CP~Cg~~ 44 (52)
T 1yk4_A 35 DWVCPLCGAP 44 (52)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCCCCCCC
Confidence 4699999974
No 267
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.83 E-value=65 Score=24.51 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=22.9
Q ss_pred cCCccc--cHHHHHHHHH-hCCCceecCCCCcccCcC
Q 014891 375 PNGYVY--STKALEEMAK-KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 375 p~G~V~--s~~al~~l~~-~~~~~~~CP~~~~~~~~~ 408 (416)
-||..| .+..|..=.+ -+...++|+.|++.|...
T Consensus 39 ~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~ 75 (96)
T 2ctd_A 39 TCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSL 75 (96)
T ss_dssp TTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSH
T ss_pred CCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCH
Confidence 488888 4555654222 244568999999999754
No 268
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.72 E-value=35 Score=21.40 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 11 KPFECSECQKAFNTK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCcCCCCCCcccCCH
Confidence 468999999999754
No 269
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=22.71 E-value=26 Score=24.87 Aligned_cols=58 Identities=10% Similarity=0.080 Sum_probs=37.6
Q ss_pred CCCCCCCchhhhcccCCC-CCCCCCCC-eeeecccccccCCCCCceeccCCccccHHHHHHH
Q 014891 329 TKEDPLSQESFRKLASPL-PYSKQHHS-KLVCYITKELMDTENPPQVLPNGYVYSTKALEEM 388 (416)
Q Consensus 329 ~~~~P~c~~~~~~l~~~L-P~~~~~hS-~~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l 388 (416)
...|+.|...+.+.+.-+ .....+|. -|.|..-+..+... .+....|.+|++..-.++
T Consensus 11 ~~~C~~C~~~i~~~e~~~~~~~~~~H~~CF~C~~C~~~L~~~--~~~~~~g~~yC~~~y~~l 70 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEG--LFYEFEGRKYCEHDFQML 70 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEEETTEEEETTTSSCTTTCCCCGGG--CCEEETTEEECHHHHHHH
T ss_pred CccchhcCccccCCceEEEeCcCeeCcCCCcccCCCCCCCCC--CeEeECCeEeCHHHHHHh
Confidence 456777877665332111 12234554 48999999998765 466778999998877654
No 270
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.63 E-value=35 Score=21.15 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2emb_A 11 KRYECSKCQATFNLR 25 (44)
T ss_dssp SSEECTTTCCEESCH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999999754
No 271
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=22.57 E-value=34 Score=20.88 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 10 ~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 10 TPYLCGQCGKSFTQR 24 (42)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999754
No 272
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.55 E-value=35 Score=21.37 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 11 KPYRCGECGKAFAQK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCCCCCccCCH
Confidence 458999999999754
No 273
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.52 E-value=30 Score=21.49 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (44)
T 2eoj_A 11 NPYECCECGKVFSRK 25 (44)
T ss_dssp CSCEETTTTEECSSH
T ss_pred cCeeCCCCCCccCCH
Confidence 458999999999754
No 274
>4a18_Q RPL36, 60S ribosomal protein L36; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_Q 4a1b_Q 4a1d_Q
Probab=22.40 E-value=1.1e+02 Score=24.59 Aligned_cols=41 Identities=22% Similarity=0.269 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCC---hHHHHHHHHHhcccccc--ccHHHHHHHHH
Q 014891 222 RLQEFIELVRGEN---NLRAITYARKYLAPWGA--THMKELQRVMA 262 (416)
Q Consensus 222 r~q~fIELir~~~---~~eAi~yar~~l~~~~~--~~~~ei~~lm~ 262 (416)
+....+|||+.++ -..|+.|+++.+..+.. ...+|++.++.
T Consensus 54 YErR~mELLKvsk~~~dKRAlKf~KKRlGth~RAKrKreel~~vl~ 99 (104)
T 4a18_Q 54 YEKRIIELIKAGSAKDSKKATKIARKRLGTHRRAKVKKALLEEAVR 99 (104)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcccchhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3456789999999 78899999999887653 23466665554
No 275
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=22.34 E-value=58 Score=26.60 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=17.7
Q ss_pred HHHHHHHh--cCChHHHHHHHHh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSD 205 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~ 205 (416)
..|+++|+ +||++.|++|+-.
T Consensus 91 ~~a~~AL~~~~nd~erAlewL~~ 113 (118)
T 4ae4_A 91 KDIKEVLLLHNNDQDNALEDLMA 113 (118)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHH
Confidence 46899996 6999999999854
No 276
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=22.17 E-value=3.3e+02 Score=22.33 Aligned_cols=93 Identities=12% Similarity=-0.102 Sum_probs=53.0
Q ss_pred HHHHHHHHHcChHHHHHHHHHHh-CCCC-cc---c-----------HHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhh
Q 014891 148 RILVDYMLRMSYYETAEKLAESS-NIQD-LV---D-----------IEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLK 211 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~es-gi~~-~~---d-----------~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~ 211 (416)
..++..+++.|.++.|..+.++. .+.. .. . ...+..+ -.-.+..|+++.|+.++..--.. .
T Consensus 42 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--a~~~~~~~~~~~A~~~~~~al~~-~ 118 (198)
T 2fbn_A 42 KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNL--ATCYNKNKDYPKAIDHASKVLKI-D 118 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH-S
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH--HHHHHHhcCHHHHHHHHHHHHHh-C
Confidence 45677888889888777765443 2211 11 0 0222222 22234689999999999865332 1
Q ss_pred hccchHHHHhHHHHHHHHHhcCChHHHHHHHHHhcc
Q 014891 212 KSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 212 k~~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (416)
..+... +...-.-+...|+..+|+.+.++-+.
T Consensus 119 p~~~~~----~~~lg~~~~~~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 119 KNNVKA----LYKLGVANMYFGFLEEAKENLYKAAS 150 (198)
T ss_dssp TTCHHH----HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cccHHH----HHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 112222 22223334567999999999987653
No 277
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.16 E-value=32 Score=21.61 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|++|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2yti_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp CTTCCSSSCCCCSSHH
T ss_pred cCeECCCCCcccCChh
Confidence 4589999999997543
No 278
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=22.06 E-value=19 Score=30.94 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=15.7
Q ss_pred ccCCccccHHHHHHHHHhCCCceecCCCCccc
Q 014891 374 LPNGYVYSTKALEEMAKKNNGKITCPRTGLVC 405 (416)
Q Consensus 374 lp~G~V~s~~al~~l~~~~~~~~~CP~~~~~~ 405 (416)
..||++|... .....||.||...
T Consensus 136 ~~Cg~~~~~~---------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 136 IGCGRKFSTL---------PPGGVCPDCGSKV 158 (165)
T ss_dssp SSSCCEESSC---------CGGGBCTTTCCBE
T ss_pred CCCCCcccCC---------CCCCcCCCCCCcc
Confidence 5678877533 2245899999864
No 279
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.96 E-value=42 Score=21.10 Aligned_cols=16 Identities=6% Similarity=0.007 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 11 KPYECDVCRKAFSHHA 26 (46)
T ss_dssp SSCBCTTTCCBCSSSH
T ss_pred CCcCCCCcCchhCCHH
Confidence 4589999999997653
No 280
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=21.95 E-value=1.2e+02 Score=23.38 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=24.8
Q ss_pred Cceecc---CCccccHHHH-HHHHH--hCCCceecCC--CCcccCcCC
Q 014891 370 PPQVLP---NGYVYSTKAL-EEMAK--KNNGKITCPR--TGLVCNYSD 409 (416)
Q Consensus 370 pP~~lp---~G~V~s~~al-~~l~~--~~~~~~~CP~--~~~~~~~~~ 409 (416)
.|+.=+ ||..|....- ..=.+ .+...++||+ |++.|....
T Consensus 61 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~ 108 (124)
T 1ubd_C 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST 108 (124)
T ss_dssp CCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTT
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHH
Confidence 355543 8888865543 32211 2445689986 999997654
No 281
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.90 E-value=35 Score=21.48 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em4_A 11 RPYECIECGKAFKTK 25 (46)
T ss_dssp SSEECSSSCCEESSH
T ss_pred cCcCCCCCCCccCCH
Confidence 458999999999754
No 282
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=21.86 E-value=18 Score=27.84 Aligned_cols=9 Identities=33% Similarity=0.885 Sum_probs=7.7
Q ss_pred ceecCCCCc
Q 014891 395 KITCPRTGL 403 (416)
Q Consensus 395 ~~~CP~~~~ 403 (416)
..+||.|+.
T Consensus 60 dW~CPvCga 68 (81)
T 2kn9_A 60 DWSCPDCGA 68 (81)
T ss_dssp TCCCTTTCC
T ss_pred CCcCCCCCC
Confidence 469999997
No 283
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=21.84 E-value=3.4e+02 Score=22.40 Aligned_cols=93 Identities=11% Similarity=-0.006 Sum_probs=41.1
Q ss_pred HHHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHH
Q 014891 147 KRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (416)
Q Consensus 147 nrlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~f 226 (416)
-..++..+.+.|.++.|..+.++.--....+...+..+. .-.+..|+.+.|+.++...-..- ..... .+..--
T Consensus 128 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~A~~~~~~~~~~~---~~~~~--~~~~la 200 (243)
T 2q7f_A 128 FYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFG--MCLANEGMLDEALSQFAAVTEQD---PGHAD--AFYNAG 200 (243)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHH--HHHHHHTCCHHHHHHHHHHHHHC---TTCHH--HHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHhC---cccHH--HHHHHH
Confidence 344566666666666666554433100111222222222 22234577777777665442211 11111 111112
Q ss_pred HHHHhcCChHHHHHHHHHhc
Q 014891 227 IELVRGENNLRAITYARKYL 246 (416)
Q Consensus 227 IELir~~~~~eAi~yar~~l 246 (416)
.-+.+.|+..+|+.+.++-+
T Consensus 201 ~~~~~~~~~~~A~~~~~~~~ 220 (243)
T 2q7f_A 201 VTYAYKENREKALEMLDKAI 220 (243)
T ss_dssp HHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHH
Confidence 22334566777777666543
No 284
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=21.78 E-value=45 Score=20.95 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=13.3
Q ss_pred CceecCCCCcccCcCCc
Q 014891 394 GKITCPRTGLVCNYSDL 410 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~~ 410 (416)
..++|+.|++.|.....
T Consensus 11 k~~~C~~C~k~f~~~~~ 27 (46)
T 2ely_A 11 KPFKCVECGKGFSRRSA 27 (46)
T ss_dssp CSBCCSSSCCCBSSTTH
T ss_pred CCcccCccCcccCCHHH
Confidence 45899999999976543
No 285
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.77 E-value=38 Score=21.31 Aligned_cols=15 Identities=13% Similarity=0.122 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2en9_A 11 KLFKCNECKKTFTQS 25 (46)
T ss_dssp CCCBCTTTCCBCSSH
T ss_pred CCEECCccCcccCCH
Confidence 458999999999754
No 286
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=21.64 E-value=3.9e+02 Score=22.98 Aligned_cols=103 Identities=12% Similarity=-0.063 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHcChHHHHHHHHHHhC-C-------CCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhc--
Q 014891 144 TRVKRILVDYMLRMSYYETAEKLAESSN-I-------QDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKS-- 213 (416)
Q Consensus 144 ~~lnrlI~dyLlR~Gy~etA~~l~~esg-i-------~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~-- 213 (416)
...-..++..+.+.|.++.|..+.++.- + ........+..+.. -....|+++.|+.++..--....+.
T Consensus 27 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~--~~~~~g~~~~A~~~~~~al~~~~~~~~ 104 (311)
T 3nf1_A 27 LRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILAL--VYRDQNKYKDAANLLNDALAIREKTLG 104 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 3455677888889998888777655431 1 11111222222222 2345799999999988765443322
Q ss_pred -cchHHHHhHHHHHHHHHhcCChHHHHHHHHHhccc
Q 014891 214 -KSKFEFQLRLQEFIELVRGENNLRAITYARKYLAP 248 (416)
Q Consensus 214 -~S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~ 248 (416)
+.......+..--.-+...|+..+|+.+.++-+.-
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 140 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 12233333333334455678999999999876543
No 287
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=21.63 E-value=32 Score=21.65 Aligned_cols=16 Identities=13% Similarity=0.389 Sum_probs=12.9
Q ss_pred CCceecCCCCcccCcC
Q 014891 393 NGKITCPRTGLVCNYS 408 (416)
Q Consensus 393 ~~~~~CP~~~~~~~~~ 408 (416)
...++|+.|++.|...
T Consensus 6 ekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 6 PARFMCLPCGIAFSSP 21 (36)
T ss_dssp CCCCEETTTTEECSCH
T ss_pred ccCeECCCCCCccCCH
Confidence 3468999999999754
No 288
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=21.61 E-value=37 Score=21.38 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 11 KPFECAECGKSFSIS 25 (46)
T ss_dssp CSEECSSSSCEESSH
T ss_pred CCEECCCCCcccCCH
Confidence 458999999999754
No 289
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=21.59 E-value=4.2e+02 Score=23.50 Aligned_cols=93 Identities=12% Similarity=0.013 Sum_probs=51.4
Q ss_pred HHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFI 227 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fI 227 (416)
..++..+.+.|.++.|....++.=-.+..+...+..+..+ .+..|+++.|++++..--. +...+. ..+...-.
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~--~~~~~~~~~A~~~~~~al~-~~p~~~----~~~~~lg~ 80 (281)
T 2c2l_A 8 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALC--YLKMQQPEQALADCRRALE-LDGQSV----KAHFFLGQ 80 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH--HHHTTCHHHHHHHHHHHTT-SCTTCH----HHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHH--HHHhcCHHHHHHHHHHHHH-hCCCCH----HHHHHHHH
Confidence 4456777788887777766544311122234444433333 3357888898888765422 111111 22222333
Q ss_pred HHHhcCChHHHHHHHHHhcc
Q 014891 228 ELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 228 ELir~~~~~eAi~yar~~l~ 247 (416)
-+...|+..+|+.+.++-+.
T Consensus 81 ~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 81 CQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 45567888888888876543
No 290
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.53 E-value=38 Score=21.36 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 11 KPYKCQVCGKAFRVSS 26 (46)
T ss_dssp CSCBCSSSCCBCSSHH
T ss_pred cccCCCCCCcccCcHH
Confidence 4589999999997643
No 291
>4aj5_K Spindle and kinetochore-associated protein 2; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=21.52 E-value=3.4e+02 Score=22.27 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=31.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 014891 87 SKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARL 127 (416)
Q Consensus 87 ~~~~~~~~l~~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl 127 (416)
++-..++.|..+-++...|+..+.....++.+..+.+++-+
T Consensus 44 NPv~Ll~~LsaIk~ry~~L~~q~~~iaaeQke~~d~ir~tL 84 (123)
T 4aj5_K 44 NPVTLLKELSVIKSRYQTLYARFKPVAVEQKESKSRICATV 84 (123)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577888899999999999998877777777777665443
No 292
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.50 E-value=1.2e+02 Score=23.12 Aligned_cols=78 Identities=8% Similarity=-0.031 Sum_probs=43.1
Q ss_pred CCCCCCchhhh---cccCCCCCCCCCCCeeeecccccccC---------------CCCCcee-ccCCccccHHHH-HHHH
Q 014891 330 KEDPLSQESFR---KLASPLPYSKQHHSKLVCYITKELMD---------------TENPPQV-LPNGYVYSTKAL-EEMA 389 (416)
Q Consensus 330 ~~~P~c~~~~~---~l~~~LP~~~~~hS~~~Cpis~~~~~---------------~~NpP~~-lp~G~V~s~~al-~~l~ 389 (416)
-.|+.|...+. .|...+- .|+-.-.|.|++-+..+. ....|+. --||..|....- ..=.
T Consensus 8 ~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~ 86 (124)
T 2dlq_A 8 VECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM 86 (124)
T ss_dssp CCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred CCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH
Confidence 46888876542 1222111 122234578888776552 2233444 458888876543 3221
Q ss_pred H--hCCCceecCCCCcccCcC
Q 014891 390 K--KNNGKITCPRTGLVCNYS 408 (416)
Q Consensus 390 ~--~~~~~~~CP~~~~~~~~~ 408 (416)
+ .+...++|++|++.|...
T Consensus 87 ~~h~~~~~~~C~~C~~~f~~~ 107 (124)
T 2dlq_A 87 VSHTGEMPYKCSSCSQQFMQK 107 (124)
T ss_dssp HHHSSSCSEECSSSCCEESSH
T ss_pred HHcCCCCCccCCCccchhCCH
Confidence 1 134468999999988654
No 293
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=21.50 E-value=3.3e+02 Score=22.18 Aligned_cols=116 Identities=10% Similarity=-0.003 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHcChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhcc----------
Q 014891 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSK---------- 214 (416)
Q Consensus 146 lnrlI~dyLlR~Gy~etA~~l~~es-gi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~---------- 214 (416)
.-..++.-+.+.|.++.|....++. .+. ..+...+..+..+ .+..|+.+.|++++..--....+..
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~lg~~--~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 115 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGML--YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 115 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHH--HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccc
Confidence 4456677778888887777665443 222 2233343333333 3457999999999876543222111
Q ss_pred -chHHHHhHHHHHHHHHhcCChHHHHHHHHHhccccccccHHHHHHHHHHh
Q 014891 215 -SKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATL 264 (416)
Q Consensus 215 -S~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~ei~~lm~lL 264 (416)
..-....+...-.-+.+.|+..+|+.+.++-+.-........+..++..+
T Consensus 116 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 116 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 01112233333344566799999999998766544333334455554444
No 294
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.50 E-value=38 Score=21.31 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 11 RHYECSECGKAFARK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCeECCcCCcccCCH
Confidence 458999999999754
No 295
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.48 E-value=38 Score=21.25 Aligned_cols=15 Identities=13% Similarity=0.233 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep3_A 11 KPYRCAECGKAFTDR 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCCchhCCH
Confidence 468999999999754
No 296
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.47 E-value=38 Score=21.18 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 11 KPYKCSDCGKSFTWK 25 (46)
T ss_dssp CSCBCSSSCCBCSSH
T ss_pred CCccCCccChhhCCH
Confidence 458999999999754
No 297
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.46 E-value=38 Score=20.72 Aligned_cols=15 Identities=13% Similarity=0.098 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 10 k~~~C~~C~k~f~~~ 24 (42)
T 2eos_A 10 KPYPCEICGTRFRHL 24 (42)
T ss_dssp CCBCCSSSCCCBSSH
T ss_pred CCEECCCCCCccCCH
Confidence 458999999999754
No 298
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.35 E-value=42 Score=21.09 Aligned_cols=16 Identities=13% Similarity=0.198 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~f~~~~ 26 (46)
T 2eoy_A 11 KCFKCNKCEKTFSCSK 26 (46)
T ss_dssp CCEECSSSCCEESSSH
T ss_pred CCEECcCCCCcCCCHH
Confidence 4589999999997653
No 299
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.33 E-value=55 Score=23.13 Aligned_cols=57 Identities=7% Similarity=0.075 Sum_probs=37.6
Q ss_pred CCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
..|+.|...+..-.+ ......+|.. |.|..-+..+++ ..+...+|.+|.+....++.
T Consensus 6 ~~C~~C~~~I~~~~~-~a~~~~~H~~CF~C~~C~~~L~~--~~~~~~~~~~yC~~cy~~~f 63 (69)
T 2cur_A 6 SGCVKCNKAITSGGI-TYQDQPWHADCFVCVTCSKKLAG--QRFTAVEDQYYCVDCYKNFV 63 (69)
T ss_dssp CCCSSSCCCCCTTCE-EETTEEECTTTTBCTTTCCBCTT--SCEEECSSCEEEHHHHHHHH
T ss_pred CCCcccCCEeCcceE-EECccccccCcCEECCCCCCCCC--CccEeECCEEECHHHhHHHh
Confidence 456666655432111 0113455655 999999999874 35788899999999887764
No 300
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=21.29 E-value=23 Score=20.51 Aligned_cols=13 Identities=23% Similarity=0.291 Sum_probs=10.5
Q ss_pred eecCCCCcccCcC
Q 014891 396 ITCPRTGLVCNYS 408 (416)
Q Consensus 396 ~~CP~~~~~~~~~ 408 (416)
++|+.|++.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (32)
T 2kfq_A 3 FACPACPKRFMRS 15 (32)
T ss_dssp SSSSSSCTTHHHH
T ss_pred CCCCCCCcccCCH
Confidence 6899999998643
No 301
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=21.28 E-value=38 Score=24.61 Aligned_cols=63 Identities=14% Similarity=0.227 Sum_probs=39.8
Q ss_pred cccCCCCCCCCCCchhhhcc---cCCC-CCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHH
Q 014891 323 CYEDDCTKEDPLSQESFRKL---ASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEE 387 (416)
Q Consensus 323 c~~~~~~~~~P~c~~~~~~l---~~~L-P~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~ 387 (416)
||.......|+.|...+.+. +.-+ .....+|.. |.|..-+..+++. ++...+|.+|.+..-.+
T Consensus 9 cy~~~~~~~C~~C~~~I~~~g~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~--~f~~~~~~~yC~~cy~~ 76 (77)
T 2egq_A 9 CYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANK--RFVFHQEQVYCPDCAKK 76 (77)
T ss_dssp CCCSCCCCCCSSSCCCCCCCSSCCCEEEETTEEEETTTCBCSSSCCBCTTS--CCCEETTEECCHHHHHH
T ss_pred HhchhhCccCcccCCcccCCCCCceeEEECcceeCcccCEehhcCCCCCCC--ccEeECCEEEChHHhcc
Confidence 34444446788888776641 1111 112345554 9999999998743 57788999998876543
No 302
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.28 E-value=40 Score=21.21 Aligned_cols=15 Identities=20% Similarity=0.158 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em6_A 11 KCYKCDVCGKEFSQS 25 (46)
T ss_dssp CCCBCSSSCCBCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999754
No 303
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.27 E-value=36 Score=21.32 Aligned_cols=15 Identities=13% Similarity=0.147 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ep1_A 11 KPYECSDCGKSFIKK 25 (46)
T ss_dssp CSSCCSSSCCCCSSH
T ss_pred CCcCCCCCCchhCCH
Confidence 458999999999754
No 304
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.22 E-value=33 Score=21.62 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eoz_A 11 KPYSCNVCGKAFVLS 25 (46)
T ss_dssp CSEEETTTTEEESSH
T ss_pred CCeECcccChhhCCH
Confidence 458999999999754
No 305
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.05 E-value=41 Score=21.03 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 11 KPYNCEECGKAFIHD 25 (46)
T ss_dssp CSEECTTTCCEESSH
T ss_pred cCccCCCCCCCcCCH
Confidence 468999999999754
No 306
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.95 E-value=33 Score=21.51 Aligned_cols=15 Identities=13% Similarity=0.279 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 11 KPYECNQCGKAFSVR 25 (46)
T ss_dssp CSSEETTTTEECSSH
T ss_pred CCeECCCCChhhCCH
Confidence 458999999999754
No 307
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.93 E-value=39 Score=21.21 Aligned_cols=15 Identities=7% Similarity=0.056 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 11 KPYECKVCSKAFTQK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred cCeECCCCCcccCCH
Confidence 458999999999754
No 308
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.91 E-value=44 Score=20.91 Aligned_cols=16 Identities=19% Similarity=0.428 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2en3_A 11 KPFQCKECGMNFSWSC 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCcccChhhCCHH
Confidence 4589999999997643
No 309
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.89 E-value=38 Score=21.25 Aligned_cols=15 Identities=20% Similarity=0.319 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 11 KPYKCNECGKVFRHN 25 (46)
T ss_dssp SSEECSSSCCEESSH
T ss_pred CCeECCCCCchhCCh
Confidence 468999999999754
No 310
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.89 E-value=39 Score=21.26 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yto_A 11 KPYKCSDCGKAFTRK 25 (46)
T ss_dssp CCEECSSSCCEESSH
T ss_pred CCEECcccCCccCCH
Confidence 458999999999754
No 311
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.86 E-value=36 Score=21.36 Aligned_cols=15 Identities=13% Similarity=0.281 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 11 KPYQCNECGKAFSQT 25 (46)
T ss_dssp CSSSCCSSCCCCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999754
No 312
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.86 E-value=40 Score=21.20 Aligned_cols=15 Identities=13% Similarity=0.259 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..+.|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 11 KPFQCEECGKRFTQN 25 (46)
T ss_dssp SSBCCSSSCCCBSSH
T ss_pred cCCCCCCCCcccCCH
Confidence 458999999999754
No 313
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.82 E-value=72 Score=24.49 Aligned_cols=25 Identities=16% Similarity=0.009 Sum_probs=20.2
Q ss_pred HHHHHHHh--cCChHHHHHHHHhhhhh
Q 014891 185 KKVIDALQ--NKEVAPALAWCSDNKSR 209 (416)
Q Consensus 185 ~~I~~~L~--~gdl~~AL~W~~~n~~~ 209 (416)
.+++.+|+ .||++.|++|+-.|...
T Consensus 44 ~~A~~AL~~t~gdve~A~e~L~sh~~~ 70 (83)
T 1veg_A 44 VVAEAALRVFGGNVQLAAQTLAHHGGS 70 (83)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 35777886 68899999999988664
No 314
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.82 E-value=40 Score=21.08 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 11 KPYVCDYCGKAFGLS 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCCCChhhCCH
Confidence 468999999999754
No 315
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.80 E-value=45 Score=20.83 Aligned_cols=16 Identities=13% Similarity=0.324 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2epw_A 11 KPCKCTECGKAFCWKS 26 (46)
T ss_dssp CSEECSSSCCEESSSH
T ss_pred CCeeCCCCCCccCCHH
Confidence 4589999999997653
No 316
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.68 E-value=40 Score=20.91 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|++|++.|....
T Consensus 11 ~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 11 KSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCEEETTTTEEESSSH
T ss_pred CCeECcccCcccCCHH
Confidence 4589999999997653
No 317
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.66 E-value=39 Score=21.16 Aligned_cols=17 Identities=12% Similarity=0.217 Sum_probs=13.1
Q ss_pred CCceecCCCCcccCcCC
Q 014891 393 NGKITCPRTGLVCNYSD 409 (416)
Q Consensus 393 ~~~~~CP~~~~~~~~~~ 409 (416)
...++|+.|++.|....
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2eml_A 10 EKPYECSVCGKAFSHRQ 26 (46)
T ss_dssp CCSEECSSSCCEESSHH
T ss_pred CCCeeCCCcCCccCCHH
Confidence 34689999999997543
No 318
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.65 E-value=43 Score=20.90 Aligned_cols=15 Identities=13% Similarity=0.359 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 11 KPHECRECGKSFSFN 25 (46)
T ss_dssp CSCBCTTTCCBCSSH
T ss_pred CCeeCCCCCchhCCH
Confidence 458999999999754
No 319
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.51 E-value=75 Score=23.22 Aligned_cols=65 Identities=11% Similarity=0.077 Sum_probs=42.9
Q ss_pred cccCCCCCCCCCCchhhhcccCCC-CCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 323 CYEDDCTKEDPLSQESFRKLASPL-PYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 323 c~~~~~~~~~P~c~~~~~~l~~~L-P~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
||.......|+.|...+.+-+.-+ .....+|.. |.|..-+..+... .+....|.+|.+....++.
T Consensus 9 cy~~~~~~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~--~~~~~~~~~yC~~cy~~~f 75 (82)
T 1x63_A 9 CTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTG--SFFPKGEDFYCVTCHETKF 75 (82)
T ss_dssp CCSCCCSCBCSSSCCBCCSSSCEEECSSCEEETTTCCCSSSCCCCTTS--CEEEETTEEEEHHHHHHHT
T ss_pred HHccccCCcCccCCcccccCceEEEECccccccccCchhhCCCccCCC--ccEeeCCEEECHHHHHHHh
Confidence 344433457888887765322111 112445544 9999999998765 5777899999998887764
No 320
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=39 Score=21.22 Aligned_cols=15 Identities=7% Similarity=-0.040 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 11 KPYECKECRKTFIQI 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCCcCchhCCH
Confidence 458999999999754
No 321
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.45 E-value=43 Score=20.97 Aligned_cols=16 Identities=13% Similarity=0.137 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (47)
T 2epx_A 11 KPYECIECGKAFIQNT 26 (47)
T ss_dssp CSBCCSSSCCCBSSHH
T ss_pred CCEECCccCchhCChH
Confidence 4589999999997543
No 322
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=20.42 E-value=2.4e+02 Score=20.01 Aligned_cols=93 Identities=9% Similarity=-0.125 Sum_probs=52.9
Q ss_pred HHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHHHH
Q 014891 148 RILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFI 227 (416)
Q Consensus 148 rlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~fI 227 (416)
..++..+.+.|.++.|..+.+..--....+...+..+..+ .+..|+++.|+.++...-.. .. ...+ ++...-.
T Consensus 8 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~~~~~-~~--~~~~--~~~~~a~ 80 (118)
T 1elw_A 8 KEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAA--YAKKGDYQKAYEDGCKTVDL-KP--DWGK--GYSRKAA 80 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHHTCHHHHHHHHHHHHHH-CT--TCHH--HHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHH--HHhhccHHHHHHHHHHHHHh-Cc--ccHH--HHHHHHH
Confidence 4456677788888877776554311112233433333332 34579999999998765332 11 1121 2222223
Q ss_pred HHHhcCChHHHHHHHHHhcc
Q 014891 228 ELVRGENNLRAITYARKYLA 247 (416)
Q Consensus 228 ELir~~~~~eAi~yar~~l~ 247 (416)
-+...|+..+|+.+.++-+.
T Consensus 81 ~~~~~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 81 ALEFLNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHhhHHHHHHHHHHHHH
Confidence 34567899999998886544
No 323
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.39 E-value=50 Score=23.93 Aligned_cols=58 Identities=7% Similarity=0.076 Sum_probs=38.3
Q ss_pred CCCCCCchhhhcccCCCCCCCCCCCe-eeecccccccCCCCCceeccCCccccHHHHHHHH
Q 014891 330 KEDPLSQESFRKLASPLPYSKQHHSK-LVCYITKELMDTENPPQVLPNGYVYSTKALEEMA 389 (416)
Q Consensus 330 ~~~P~c~~~~~~l~~~LP~~~~~hS~-~~Cpis~~~~~~~NpP~~lp~G~V~s~~al~~l~ 389 (416)
..|+.|...+..-.+. .....+|.- |.|..-+..+.... .+....|.+|++..-.++.
T Consensus 6 ~~C~~C~~~I~~~~v~-a~~~~wH~~CF~C~~C~~~L~~~~-~f~~~~~~~yC~~C~~~~~ 64 (73)
T 1wig_A 6 SGCDSCEKYITGRVLE-AGEKHYHPSCALCVRCGQMFAEGE-EMYLQGSSIWHPACRQAAR 64 (73)
T ss_dssp CSCSSSCCCCSSCCBC-CSSCCBCTTTSCCSSSCCCCCSSC-CCEEETTEEECTTHHHHTS
T ss_pred CCcccCCCEecCeeEE-eCCCCCCCCcCEeCCCCCCCCCCC-eeEeeCCEEEChHHChHhh
Confidence 3567776655431111 223566765 99999999987433 5667799999988887764
No 324
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.39 E-value=41 Score=21.12 Aligned_cols=15 Identities=13% Similarity=0.301 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 11 KPFKCKECGKAFRQN 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCEECCcCCchhCCH
Confidence 458999999999754
No 325
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.31 E-value=41 Score=20.90 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..+.|+.|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 11 TTSECQECGKIFRHS 25 (44)
T ss_dssp CCCCCTTTCCCCSSH
T ss_pred cCeECCCCCcccCCH
Confidence 458999999999754
No 326
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.27 E-value=39 Score=21.18 Aligned_cols=15 Identities=13% Similarity=0.091 Sum_probs=12.2
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2eoq_A 11 KPFKCDICGKSFCGR 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCcCCCcCCchhCCH
Confidence 458999999999754
No 327
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=20.26 E-value=2.4e+02 Score=20.12 Aligned_cols=94 Identities=12% Similarity=0.036 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhhhhccchHHHHhHHHH
Q 014891 146 VKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (416)
Q Consensus 146 lnrlI~dyLlR~Gy~etA~~l~~esgi~~~~d~~~f~~~~~I~~~L~~gdl~~AL~W~~~n~~~L~k~~S~LeF~Lr~q~ 225 (416)
.-..++..+.+.|.++.|..+.++.--....+...+..+ ..-....|+.+.|+.++..--.. ........+ .-
T Consensus 11 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l--a~~~~~~~~~~~A~~~~~~~~~~-~~~~~~~~~----~l 83 (125)
T 1na0_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL--GNAYYKQGDYDEAIEYYQKALEL-DPNNAEAWY----NL 83 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHH----HH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHH--HHHHHHhCCHHHHHHHHHHHHHh-CCccHHHHH----HH
Confidence 334567778888888888776554311111123333222 22234679999999998765332 111122222 22
Q ss_pred HHHHHhcCChHHHHHHHHHhc
Q 014891 226 FIELVRGENNLRAITYARKYL 246 (416)
Q Consensus 226 fIELir~~~~~eAi~yar~~l 246 (416)
-.-+.+.|+..+|+.+.++-+
T Consensus 84 a~~~~~~~~~~~A~~~~~~~~ 104 (125)
T 1na0_A 84 GNAYYKQGDYDEAIEYYQKAL 104 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHH
Confidence 223446788999999888654
No 328
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.22 E-value=43 Score=20.95 Aligned_cols=16 Identities=13% Similarity=0.169 Sum_probs=12.8
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 11 RPYICTVCGKAFTDRS 26 (46)
T ss_dssp CSEECTTTCCEESSHH
T ss_pred CCcCCCCCCchhCCHH
Confidence 4689999999997643
No 329
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.22 E-value=40 Score=21.19 Aligned_cols=15 Identities=13% Similarity=0.324 Sum_probs=12.4
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2emf_A 11 KHFECTECGKAFTRK 25 (46)
T ss_dssp CCEECSSSCCEESCH
T ss_pred CCeECCCCCchhCCH
Confidence 458999999999754
No 330
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.21 E-value=41 Score=21.14 Aligned_cols=15 Identities=13% Similarity=0.180 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 ~~~~C~~C~k~f~~~ 25 (46)
T 2em5_A 11 KSHQCHECGRGFTLK 25 (46)
T ss_dssp CSEECSSSCCEESSH
T ss_pred CCeECCcCCCccCCH
Confidence 458999999999754
No 331
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.19 E-value=1e+02 Score=22.34 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=19.9
Q ss_pred CCccccHH-HHHHHHHh--CC--CceecCCCCcccCcC
Q 014891 376 NGYVYSTK-ALEEMAKK--NN--GKITCPRTGLVCNYS 408 (416)
Q Consensus 376 ~G~V~s~~-al~~l~~~--~~--~~~~CP~~~~~~~~~ 408 (416)
||..|... .|..=.+. +. ..++|++|++.|...
T Consensus 41 C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~ 78 (95)
T 2yt9_A 41 CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRP 78 (95)
T ss_dssp SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSH
T ss_pred CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCH
Confidence 66666543 33332221 22 568999999999754
No 332
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.19 E-value=44 Score=20.93 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=12.7
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 k~~~C~~C~k~F~~~~ 26 (46)
T 2ytn_A 11 KPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSCBCTTTCCBCSSHH
T ss_pred cCeECCCCCCeeCCHH
Confidence 4589999999997643
No 333
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.14 E-value=40 Score=21.22 Aligned_cols=15 Identities=13% Similarity=0.153 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|++|++.|...
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 11 RGHRCSDCGKFFLQA 25 (46)
T ss_dssp SSCCCSSSCCCCSSH
T ss_pred CCcCCCCCCCeeCCh
Confidence 458999999999754
No 334
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.11 E-value=48 Score=20.74 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=12.9
Q ss_pred CceecCCCCcccCcCC
Q 014891 394 GKITCPRTGLVCNYSD 409 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~~ 409 (416)
..++|+.|++.|....
T Consensus 11 ~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 11 KPFKCGECGKSYNQRV 26 (46)
T ss_dssp CSEECTTTCCEESSSH
T ss_pred CCeECCCCCcccCCHH
Confidence 4689999999997653
No 335
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.06 E-value=42 Score=21.10 Aligned_cols=15 Identities=13% Similarity=0.197 Sum_probs=12.3
Q ss_pred CceecCCCCcccCcC
Q 014891 394 GKITCPRTGLVCNYS 408 (416)
Q Consensus 394 ~~~~CP~~~~~~~~~ 408 (416)
..++|+.|++.|...
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 11 RPFKCNECGKGFGRR 25 (46)
T ss_dssp CSCCCSSSCCCCSSH
T ss_pred CCeECCCCCcccCCH
Confidence 458999999999764
Done!