BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014893
(416 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYY4|BASS6_ARATH Probable sodium/metabolite cotransporter BASS6, chloroplastic
OS=Arabidopsis thaliana GN=BASS6 PE=2 SV=1
Length = 409
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/359 (71%), Positives = 301/359 (83%), Gaps = 6/359 (1%)
Query: 58 KFGSSRNFVTNSVSENISGPFDQDPDRNYVTESNQVLNQEFSLVNILKQSNSFLPHVVLG 117
+ G SRN S+N S DP + +V+ + S+V+ +K++NS LPHVVL
Sbjct: 54 QVGGSRNLWRRYASDNFSE-MGLDPG----ADPFKVIEKP-SIVDRMKKANSILPHVVLA 107
Query: 118 STMLALVFPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVV 177
ST+LAL++PPSFTWFT+RY+ PALGFLMFAVG+NS+EKDF+EAFKRP AI GYVGQ++V
Sbjct: 108 STILALIYPPSFTWFTSRYFVPALGFLMFAVGINSNEKDFLEAFKRPKAILLGYVGQYLV 167
Query: 178 KPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLS 237
KP+LG+IFG +VS+F LPTPIGAGIMLVSCVSGAQLSNYATFLTDP LAPLSIVMTSLS
Sbjct: 168 KPVLGFIFGLAAVSLFQLPTPIGAGIMLVSCVSGAQLSNYATFLTDPALAPLSIVMTSLS 227
Query: 238 TATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFL 297
TATAV VTP+LSLLLIGK+LPVDVKGM+SSILQ+V+ PIAAGLLLN+ FP++ NAIRPFL
Sbjct: 228 TATAVLVTPMLSLLLIGKKLPVDVKGMISSILQVVIAPIAAGLLLNKLFPKVSNAIRPFL 287
Query: 298 PPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDV 357
P LSVL TACCVGAPLA+NI SVMSPFG TILLL+ FHLSAF+AGY +TG F A D
Sbjct: 288 PILSVLDTACCVGAPLALNINSVMSPFGATILLLVTMFHLSAFLAGYFLTGSVFRNAPDA 347
Query: 358 KALQRTLSYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLWAKKSE 416
KA+QRTLSYETGMQSSLLALALA +FFQDPLV +PPAISTV+MSLMGF LV++W+K+
Sbjct: 348 KAMQRTLSYETGMQSSLLALALATKFFQDPLVGIPPAISTVVMSLMGFTLVLIWSKEKS 406
>sp|Q650U0|BASS5_ORYSJ Probable sodium/metabolite cotransporter BASS5, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS5 PE=2 SV=1
Length = 401
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/352 (70%), Positives = 297/352 (84%), Gaps = 2/352 (0%)
Query: 67 TNSVSENISGPFDQD--PDRNYVTESNQVLNQEFSLVNILKQSNSFLPHVVLGSTMLALV 124
+ V + SG F++D D + + V + L+ ILK +N+ +PHVVLGST+LALV
Sbjct: 49 SGRVWASASGSFEKDRIGDDDVLASPQIVEESKVDLLKILKSANTIIPHVVLGSTILALV 108
Query: 125 FPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYI 184
+PPSFTWFT RYYAPALGFLMFAVGVNSS KDFIEA +RP AI AGYVGQF++KP LG++
Sbjct: 109 YPPSFTWFTTRYYAPALGFLMFAVGVNSSVKDFIEAIQRPDAIAAGYVGQFIIKPFLGFL 168
Query: 185 FGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFV 244
FGT++V++F LPT +GAGIMLVSCVSGAQLSNYATFLTDP +APLSIVMTSLSTATAVFV
Sbjct: 169 FGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMTSLSTATAVFV 228
Query: 245 TPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLV 304
TP LS LIGK+LPVDVKGM+SSI+QIVV PIAAGLLLNR+ PR+C+AI+PFLPPLSV V
Sbjct: 229 TPTLSYFLIGKKLPVDVKGMMSSIVQIVVAPIAAGLLLNRYLPRLCSAIQPFLPPLSVFV 288
Query: 305 TACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTL 364
TA CVG+PLAINI++V+SPFGL +LL+ FH S+F+AGY + G F E+ DVKALQRT+
Sbjct: 289 TALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFIAGYHLAGTWFRESADVKALQRTV 348
Query: 365 SYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLWAKKSE 416
S+ETGMQSSLLALALANRFF DPLV VPPAIS V+MSLMGF LVM+W+K+++
Sbjct: 349 SFETGMQSSLLALALANRFFPDPLVGVPPAISVVLMSLMGFALVMVWSKRTK 400
>sp|B8BDK4|BASS5_ORYSI Probable sodium/metabolite cotransporter BASS5, chloroplastic
OS=Oryza sativa subsp. indica GN=BASS5 PE=3 SV=1
Length = 401
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/352 (70%), Positives = 297/352 (84%), Gaps = 2/352 (0%)
Query: 67 TNSVSENISGPFDQD--PDRNYVTESNQVLNQEFSLVNILKQSNSFLPHVVLGSTMLALV 124
+ V + SG F++D D + + V + L+ ILK +N+ +PHVVLGST+LALV
Sbjct: 49 SGRVWASASGSFEKDRIGDDDVLASPQIVEESKVDLLKILKSANTIIPHVVLGSTILALV 108
Query: 125 FPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYI 184
+PPSFTWFT RYYAPALGFLMFAVGVNSS KDFIEA +RP AI AGYVGQF++KP LG++
Sbjct: 109 YPPSFTWFTTRYYAPALGFLMFAVGVNSSVKDFIEAIQRPDAIAAGYVGQFIIKPFLGFL 168
Query: 185 FGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFV 244
FGT++V++F LPT +GAGIMLVSCVSGAQLSNYATFLTDP +APLSIVMTSLSTATAVFV
Sbjct: 169 FGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMTSLSTATAVFV 228
Query: 245 TPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLV 304
TP LS LIGK+LPVDVKGM+SSI+QIVV PIAAGLLLNR+ PR+C+AI+PFLPPLSV V
Sbjct: 229 TPTLSYFLIGKKLPVDVKGMMSSIVQIVVAPIAAGLLLNRYLPRLCSAIQPFLPPLSVFV 288
Query: 305 TACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTL 364
TA CVG+PLAINI++V+SPFGL +LL+ FH S+F+AGY + G F E+ DVKALQRT+
Sbjct: 289 TALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFIAGYHLAGTWFRESADVKALQRTV 348
Query: 365 SYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLWAKKSE 416
S+ETGMQSSLLALALANRFF DPLV VPPAIS V+MSLMGF LVM+W+K+++
Sbjct: 349 SFETGMQSSLLALALANRFFPDPLVGVPPAISVVLMSLMGFALVMVWSKRTK 400
>sp|F4JPW1|BASS5_ARATH Probable sodium/metabolite cotransporter BASS5, chloroplastic
OS=Arabidopsis thaliana GN=BASS5 PE=2 SV=1
Length = 407
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/399 (64%), Positives = 319/399 (79%), Gaps = 12/399 (3%)
Query: 25 SKHNIPVLPRNRS--LSFSTSWCPVHFRSISHSNLKFGSSRNF--VTNSVSENISGPFDQ 80
S+H + + PRN S L+F ++ +F S S+L S +F +N +S+N
Sbjct: 14 SQHRL-LQPRNYSYALAFHSTRRVANFPRNSFSSLG-SCSVDFPLRSNPISQNSK---SI 68
Query: 81 DPDRNYVTES--NQVLNQEFS-LVNILKQSNSFLPHVVLGSTMLALVFPPSFTWFTARYY 137
P R YV+ES N++ +++ S ++ LKQ+ SF+PH +L ST+LALV+PPSFTWF RY+
Sbjct: 69 HPWRRYVSESDSNELYHKKVSSIMETLKQAYSFIPHGILLSTILALVYPPSFTWFKPRYF 128
Query: 138 APALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPT 197
P LGF+MFAVG+NS+E+DF+EA KRP AIFAGY+GQ+++KP+LGYIFG I+VS+F LPT
Sbjct: 129 VPGLGFMMFAVGINSNERDFLEALKRPDAIFAGYIGQYLIKPLLGYIFGVIAVSLFNLPT 188
Query: 198 PIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRL 257
IGAGIMLVSCVSGAQLSNY TFLTDP LA LSIVMTS+STATAV VTP+LSLLLIGK+L
Sbjct: 189 SIGAGIMLVSCVSGAQLSNYTTFLTDPSLAALSIVMTSISTATAVLVTPMLSLLLIGKKL 248
Query: 258 PVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINI 317
PVDV GM+SSILQ+V+ PIAAGLLLNR FPR+ NAI+PFLP L+V+ +CC+GAPLA+NI
Sbjct: 249 PVDVFGMISSILQVVITPIAAGLLLNRLFPRLSNAIKPFLPALTVIDMSCCIGAPLALNI 308
Query: 318 ESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLAL 377
+S++SPFG TIL L+ITFHL AFVAGY TG F++A DVKALQRT+SYETGMQSSLLAL
Sbjct: 309 DSILSPFGATILFLVITFHLLAFVAGYFFTGFFFSKAPDVKALQRTISYETGMQSSLLAL 368
Query: 378 ALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLWAKKSE 416
ALA +FFQDPLV VPPAISTV+MSLMG LV +W + E
Sbjct: 369 ALATKFFQDPLVGVPPAISTVVMSLMGVSLVTIWKNRKE 407
>sp|Q6K739|BASS3_ORYSJ Probable sodium/metabolite cotransporter BASS3, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS3 PE=2 SV=1
Length = 423
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 185/287 (64%), Gaps = 8/287 (2%)
Query: 126 PPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIF 185
P +F+W + YYAPALG +M ++G+ S DF AFKRP + GY+ Q++VKP++G +
Sbjct: 123 PATFSWVSKEYYAPALGGIMLSIGIKLSIDDFALAFKRPVPLTIGYMAQYIVKPLMGVLI 182
Query: 186 GTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVT 245
FG+P+ AG +L CVSGAQLS+YA+FL+ +A LSI++TS ST ++V VT
Sbjct: 183 A----RAFGMPSAFFAGFVLTCCVSGAQLSSYASFLSKGDVA-LSILLTSCSTISSVVVT 237
Query: 246 PLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLVT 305
P+L+ LLIG +PVD M SILQ+V+VP+ GLLLN + + N I+P +P +++L T
Sbjct: 238 PVLTGLLIGSVVPVDGIAMAKSILQVVLVPVTLGLLLNTYAKAVVNVIQPVMPFVAMLCT 297
Query: 306 ACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLS 365
+ C+G+PLAIN ++S G +LL I+TFH++AF+ GY ++ L + + RT+S
Sbjct: 298 SLCIGSPLAINRSKILSSEGFLLLLPIVTFHIAAFIVGYWISKLPMLRQEE--PVCRTIS 355
Query: 366 YETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLWA 412
TGMQSS LA LA +F +VP A S VIM++ G L W
Sbjct: 356 VCTGMQSSTLAGLLATQFLGSSQ-AVPAACSVVIMAIFGLTLASYWG 401
>sp|Q8RXE8|BASS3_ARATH Probable sodium/metabolite cotransporter BASS3, chloroplastic
OS=Arabidopsis thaliana GN=BASS3 PE=2 SV=1
Length = 431
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/306 (41%), Positives = 191/306 (62%), Gaps = 8/306 (2%)
Query: 108 NSFLPHVVLGSTMLALVFPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAI 167
++ LP VV + + AL +PPSFTW + YAPALG +M ++G+ S DF AFKRP +
Sbjct: 112 SALLPFVVALTAVAALSYPPSFTWVSKDLYAPALGGIMLSIGIQLSVDDFALAFKRPVPL 171
Query: 168 FAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLA 227
G+V Q+V+KP+LG + + FG+P AG +L CV+GAQLS+YA+ L+ +A
Sbjct: 172 SVGFVAQYVLKPLLGVLVA----NAFGMPRTFYAGFILTCCVAGAQLSSYASSLSKADVA 227
Query: 228 PLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFP 287
+SI++TS +T +V TPLLS LLIG +PVD M SILQ+V+VPI GL+LN +
Sbjct: 228 -MSILLTSSTTIASVIFTPLLSGLLIGSVVPVDAVAMSKSILQVVLVPITLGLVLNTYAK 286
Query: 288 RICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVT 347
+ ++P +P ++++ T+ C+G+PL+IN ++S GL +++ I+TFH AF GY +
Sbjct: 287 PVVTLLQPVMPFVAMVCTSLCIGSPLSINRSQILSAEGLGLIVPIVTFHAVAFALGYWFS 346
Query: 348 GLAFAEAHDVKALQRTLSYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFL 407
+ + + RT+S TGMQSS LA LA++F +VP A S V+M++MG L
Sbjct: 347 KIPGLRQEE--EVSRTISLCTGMQSSTLAGLLASQFLGSS-QAVPAACSVVVMAIMGLCL 403
Query: 408 VMLWAK 413
W
Sbjct: 404 ASFWGN 409
>sp|Q1EBV7|BASS2_ARATH Sodium/pyruvate cotransporter BASS2, chloroplastic OS=Arabidopsis
thaliana GN=BASS2 PE=2 SV=1
Length = 409
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 205/411 (49%), Gaps = 53/411 (12%)
Query: 31 VLPRNRSLS---FSTSWCPVHFRSISHSN---------------------------LKFG 60
+LP + LS +TSW P R+ +H + L+
Sbjct: 7 ILPTDGRLSQCRINTSWVPSTTRTQTHLDFPKLVSVSNSGISLRIQNSKPISPVFALEAT 66
Query: 61 SSRNFVTNSVSENISGPFDQDPDRNYVTESNQVLNQEFSLVNILKQSNSFLPHVVLGSTM 120
SSR V + + +SG + + L+Q ++ +L + P V+ T+
Sbjct: 67 SSRRVVCKAAA-GVSGDLPESTPKE--------LSQYEKIIELL---TTLFPLWVILGTL 114
Query: 121 LALVFPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPI 180
+ + P TW + LGFLM ++G+ + +DF + P + G++ Q+++KPI
Sbjct: 115 VGIFKPSLVTWLETDLFTLGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYMIKPI 174
Query: 181 LGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTAT 240
LG++ L P+ G++LVSC G Q SN AT+++ +A LS++MT+ ST
Sbjct: 175 LGFLIAM----TLKLSAPLATGLILVSCCPGGQASNVATYISKGNVA-LSVLMTTCSTIG 229
Query: 241 AVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPL 300
A+ +TPLL+ LL G+ +PVD G+ S Q+V+VP G+L N FFP+ + I P +
Sbjct: 230 AIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLVPTIIGVLANEFFPKFTSKIITVTPLI 289
Query: 301 SVLVTACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKAL 360
V++T +P+ + V+ G ++L + H +AF GY ++ +F E+
Sbjct: 290 GVILTTLLCASPIG-QVADVLKTQGAQLILPVALLHAAAFAIGYWISKFSFGESTS---- 344
Query: 361 QRTLSYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLW 411
RT+S E GMQSS L LA + F +PLV+VP A+S V M+L G L + W
Sbjct: 345 -RTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSGLAVFW 394
>sp|Q5VRB2|BASS2_ORYSJ Probable sodium/metabolite cotransporter BASS2, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS2 PE=2 SV=1
Length = 419
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 176/322 (54%), Gaps = 15/322 (4%)
Query: 95 NQEFSLVNILKQSNSFLPHVVLGSTMLALVFPPSFTWFTARYYAPALGFLMFAVGVNSSE 154
NQ +V +L + P V+ T++ + P TW + LGFLM ++G+ +
Sbjct: 101 NQYEKIVELL---TTLFPVWVILGTIIGIYKPSMVTWLETDLFTVGLGFLMLSMGLTLTF 157
Query: 155 KDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQL 214
+DF + P + G++ Q+++KP+LG+ L P+ G++LVSC G Q
Sbjct: 158 EDFRRCMRNPWTVGVGFLAQYLIKPMLGFAIAM----TLKLSAPLATGLILVSCCPGGQA 213
Query: 215 SNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVV 274
SN AT+++ +A LS++MT+ ST A+ +TPLL+ LL G+ +PVD G+ S Q+V++
Sbjct: 214 SNVATYISKGNVA-LSVLMTTCSTIGAIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLL 272
Query: 275 PIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIIT 334
P G+L + +FP+ I P + VL+T +P+ + V+ G +++ +
Sbjct: 273 PTIVGVLAHEYFPKFTERIISITPLIGVLLTTLLCASPIG-QVSEVLKAQGGQLIIPVAL 331
Query: 335 FHLSAFVAGYVVTGL-AFAEAHDVKALQRTLSYETGMQSSLLALALANRFFQDPLVSVPP 393
H++AF GY ++ + +F E+ RT+S E GMQSS L LA + F +PLV+VP
Sbjct: 332 LHVAAFALGYWLSKVSSFGESTS-----RTISIECGMQSSALGFLLAQKHFTNPLVAVPS 386
Query: 394 AISTVIMSLMGFFLVMLWAKKS 415
A+S V M+L G L + W +
Sbjct: 387 AVSVVCMALGGSALAVFWRNRG 408
>sp|Q93YR2|BASS1_ARATH Probable sodium/metabolite cotransporter BASS1, chloroplastic
OS=Arabidopsis thaliana GN=BASS1 PE=2 SV=1
Length = 401
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 190/380 (50%), Gaps = 22/380 (5%)
Query: 46 PVHFRSISHSNLKFGSSRNFVTNSVSENI-----SGPFDQDP-----DRNYVTESNQVLN 95
P+H R+IS S L + S ++ + FD P + TE +
Sbjct: 28 PLHLRTISCSRLSYSPSSREISLKTQSTVPISCRRSRFDFVPRCGISSNDLPTEKKKSFG 87
Query: 96 QEFSLVNILKQSNSFLPHVVLGSTMLALVFPPSFTWFTARYYAPALGFLMFAVGVNSSEK 155
+ V S +F V LG +L L+ P +F W T + L M +G+ +
Sbjct: 88 EWVEFVG-EAVSTAFPIWVSLG-CLLGLMRPSTFNWVTPNWTIVGLTITMLGMGMTLTLD 145
Query: 156 DFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLS 215
D A P +FAG++ Q+ V P+ + + LP AG++LV C G S
Sbjct: 146 DLRGALSMPKELFAGFLLQYSVMPLSAFFVSKL----LNLPPHYAAGLILVGCCPGGTAS 201
Query: 216 NYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVP 275
N T++ +A LS++MT+ ST +AV +TPLL+ L + + VD G++ S LQ+V++P
Sbjct: 202 NIVTYIARGNVA-LSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLP 260
Query: 276 IAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITF 335
+ AG LN++F ++ + P +PP++V A G + N +++ G ++L
Sbjct: 261 VLAGAFLNQYFKKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMS-GKQVVLASCLL 319
Query: 336 HLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLALALANRFFQDPLVSVPPAI 395
H+S F+ GY+ + + + A RT+S E GMQ+S+L + LA + F +PL +VP A+
Sbjct: 320 HISGFLFGYLFSRILGIDV----ASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAV 375
Query: 396 STVIMSLMGFFLVMLWAKKS 415
S+V S++G L +W + +
Sbjct: 376 SSVCHSILGSVLAGIWRRSA 395
>sp|Q7XVB3|BASS1_ORYSJ Probable sodium/metabolite cotransporter BASS1, chloroplastic
OS=Oryza sativa subsp. japonica GN=BASS1 PE=2 SV=2
Length = 406
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%)
Query: 112 PHVVLGSTMLALVFPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGY 171
P V + +AL PP+F W + + F M +G+ + D A P + +G+
Sbjct: 107 PVWVASACAVALWRPPAFLWVSPMAQIVGISFTMLGMGMTLTLDDLKTALLMPKELASGF 166
Query: 172 VGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSI 231
+ Q+ V P+ G++ + LP+ AG++LVSC G SN T+L +A LS+
Sbjct: 167 LLQYSVMPLSGFLISKL----LNLPSYYAAGLILVSCCPGGTASNIVTYLARGNVA-LSV 221
Query: 232 VMTSLSTATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICN 291
+MT+ ST A F+TPLL+ L G+ + VD G+ S Q+V+ P+ G LLN++ +
Sbjct: 222 LMTAASTFAAAFLTPLLTSKLAGQYVAVDPMGLFVSTSQVVLAPVLLGALLNQYCNGLVQ 281
Query: 292 AIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAF 351
+ P +P ++V A G +A N +++S GL +++ + H S F GYV L+
Sbjct: 282 LVSPLMPFIAVATVAVLCGNAIAQNASAILSS-GLQVVMSVCWLHASGFFFGYV---LSR 337
Query: 352 AEAHDVKALQRTLSYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLW 411
D+ + RT+S E GMQ+S+L + LA++ F +PL +VP A+S+V S+ G L +W
Sbjct: 338 TIGIDISS-SRTISIEVGMQNSVLGVVLASKHFGNPLTAVPCAVSSVCHSVYGSLLAGIW 396
>sp|O34524|YOCS_BACSU Uncharacterized sodium-dependent transporter YocS OS=Bacillus
subtilis (strain 168) GN=yocS PE=3 SV=1
Length = 321
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 152/299 (50%), Gaps = 16/299 (5%)
Query: 120 MLALVFPPSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKP 179
+L FP FTW ++ Y LG +MF +G+ DF E ++P + G + Q+ + P
Sbjct: 24 VLGFSFPSLFTWISS-YITIFLGIIMFGMGLTLQADDFKELVRKPWQVIIGVIAQYTIMP 82
Query: 180 IL--GYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLS 237
++ G FG LP I G++LV C G SN TFL A LS+ +T++S
Sbjct: 83 LVAFGLAFG------LHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTA-LSVAVTTIS 135
Query: 238 TATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFL 297
T A VTPLL +L + LPV + SILQ V+ PI AGL++ FF + L
Sbjct: 136 TLLAPVVTPLLIMLFAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHAL 195
Query: 298 PPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDV 357
P +SV+ V A ++ N E+++ GL I ++I + ++ G++ L +
Sbjct: 196 PLVSVIGIVAIVSAVVSGNRENLLQS-GLLIFSVVILHNGIGYLLGFLCAKLLKMDYPS- 253
Query: 358 KALQRTLSYETGMQSSLLALALANRFFQDPLVSVPPAISTVIMSLMGFFLVMLWAKKSE 416
Q+ ++ E GMQ+S L ALA F PL +VP AI +V +L G L W+KK +
Sbjct: 254 ---QKAIAIEVGMQNSGLGAALATAHF-SPLSAVPSAIFSVWHNLSGSMLATYWSKKVK 308
>sp|Q12908|NTCP2_HUMAN Ileal sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A2
PE=1 SV=2
Length = 348
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
L +MF++G N K F+ KRP I G++ QF + P+ G+I +++ + L +
Sbjct: 42 LALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFIL-SVAFDILPLQAVV- 99
Query: 201 AGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVD 260
++++ C G SN + D + LS+ MT+ ST A+ + PL LLI ++ VD
Sbjct: 100 --VLIIGCCPGGTASNILAYWVDGDM-DLSVSMTTCSTLLALGMMPL--CLLIYTKMWVD 154
Query: 261 VKGMV------SSILQIVVVPIAAGLLLNRFFPRICNAIRPFLP-PLSVLVTACCVGAPL 313
+V + L +VVP++ G+ +N +P+ I ++L+ V +
Sbjct: 155 SGSIVIPYDNIGTSLVSLVVPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGI 214
Query: 314 AINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSS 373
+++P + ++ F ++ + G+++ +A + RT+++ETGMQ++
Sbjct: 215 LYQSAWIIAP---KLWIIGTIFPVAGYSLGFLLARIAGLPWYRC----RTVAFETGMQNT 267
Query: 374 LLA 376
L
Sbjct: 268 QLC 270
>sp|Q28727|NTCP2_RABIT Ileal sodium/bile acid cotransporter OS=Oryctolagus cuniculus
GN=SLC10A2 PE=2 SV=1
Length = 347
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 23/244 (9%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
L +MF++G N K F+ +RP IF G++ QF + P+ G++ FG+ PI
Sbjct: 43 LALVMFSMGCNVEIKKFLGHIRRPWGIFIGFLCQFGIMPLTGFVLAV----AFGI-MPIQ 97
Query: 201 AGIMLV-SCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPV 259
A ++L+ C G SN + D + LS+ MT+ ST A+ + PL L + ++ V
Sbjct: 98 AVVVLIMGCCPGGTASNILAYWVDGDM-DLSVSMTTCSTLLALGMMPL--CLYVYTKMWV 154
Query: 260 DVKGMV------SSILQIVVVPIAAGLLLNRFFPRICNAI-RPFLPPLSVLVTACCVGAP 312
D +V + L +VVP++ G+ +N +P+ I + +VL+ V
Sbjct: 155 DSGTIVIPYDNIGTSLVALVVPVSIGMFVNHKWPQKAKIILKVGSIAGAVLIVLIAVVGG 214
Query: 313 LAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQS 372
+ ++ P + ++ F ++ + G+ + +A + RT++ ETGMQ+
Sbjct: 215 ILYQSAWIIEP---KLWIIGTIFPMAGYSLGFFLARIAGQPWYRC----RTVALETGMQN 267
Query: 373 SLLA 376
+ L
Sbjct: 268 TQLC 271
>sp|Q62633|NTCP2_RAT Ileal sodium/bile acid cotransporter OS=Rattus norvegicus
GN=Slc10a2 PE=2 SV=1
Length = 348
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 21/243 (8%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
L +MF++G N F+ KRP IF G++ QF + P+ G+I +SV+ LP
Sbjct: 42 LAMVMFSMGCNVEINKFLGHIKRPWGIFVGFLCQFGIMPLTGFI---LSVASGILPVQ-A 97
Query: 201 AGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVD 260
++++ C G SN + D + LS+ MT+ ST A+ + PL L I ++ VD
Sbjct: 98 VVVLIMGCCPGGTGSNILAYWIDGDM-DLSVSMTTCSTLLALGMMPL--CLFIYTKMWVD 154
Query: 261 VKGMV---SSI---LQIVVVPIAAGLLLNRFFPRICNAIRPFLP-PLSVLVTACCVGAPL 313
+V SI L +V+P++ G+ +N +P+ I ++L+ V +
Sbjct: 155 SGTIVIPYDSIGISLVALVIPVSIGMFVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGI 214
Query: 314 AINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSS 373
++ P + ++ F ++ + G+ + LA + RT++ ETGMQ++
Sbjct: 215 LYQSAWIIEP---KLWIIGTIFPIAGYSLGFFLARLAGQPWYRC----RTVALETGMQNT 267
Query: 374 LLA 376
L
Sbjct: 268 QLC 270
>sp|P70172|NTCP2_MOUSE Ileal sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a2
PE=2 SV=2
Length = 348
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 23/244 (9%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
L +MF++G N F+ KRP IF G++ QF + P+ G+I +SV+ LP
Sbjct: 42 LAMVMFSMGCNVEVHKFLGHIKRPWGIFVGFLCQFGIMPLTGFI---LSVASGILPVQ-A 97
Query: 201 AGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVD 260
++++ C G SN + D + LS+ MT+ ST A+ + PL L + ++ VD
Sbjct: 98 VVVLIMGCCPGGTGSNILAYWIDGDM-DLSVSMTTCSTLLALGMMPL--CLFVYTKMWVD 154
Query: 261 VKGMV---SSI---LQIVVVPIAAGLLLNRFFPRICNAIRPF--LPPLSVLVTACCVGAP 312
+V SI L +V+P++ G+ +N +P+ I + + ++V +G
Sbjct: 155 SGTIVIPYDSIGISLVALVIPVSFGMFVNHKWPQKAKIILKIGSITGVILIVLIAVIGGI 214
Query: 313 LAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQS 372
L + ++ P + ++ F ++ + G+ + LA + RT++ ETGMQ+
Sbjct: 215 LYQS-AWIIEP---KLWIIGTIFPIAGYSLGFFLARLAGQPWYRC----RTVALETGMQN 266
Query: 373 SLLA 376
+ L
Sbjct: 267 TQLC 270
>sp|Q9CXB2|SOAT_MOUSE Solute carrier family 10 member 6 OS=Mus musculus GN=Slc10a6 PE=2
SV=1
Length = 373
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 138 APALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGL-P 196
A +G +MF+ G + + +RP I G + QF + P+ Y+ FGL P
Sbjct: 39 AVMVGLVMFSFGCSVESQKLWLHLRRPWGIAVGLLSQFGLMPLTAYLLAI----GFGLKP 94
Query: 197 TPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKR 256
A +M+ SC G +SN TF D + LSI MT+ ST A+ + PL L I R
Sbjct: 95 FQAIAVLMMGSC-PGGTISNVLTFWVDGDM-DLSISMTTCSTVAALGMMPL--CLYIYTR 150
Query: 257 LPVDVKGMVSSILQI------VVVPIAAGLLLNRFFPRICNAI---RPFLPPLSVLVTAC 307
+ +V I +VVP+A+G+ +N +P+ I L + +LV A
Sbjct: 151 SWTLTQNLVIPYQSIGITLVSLVVPVASGVYVNYRWPKQATVILKVGAILGGMLLLVVA- 209
Query: 308 CVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYE 367
G LA + +T+L++ F L V G++ LAF H RT+S E
Sbjct: 210 VTGMVLAKGWNT-----DVTLLVISCIFPLVGHVTGFL---LAFL-THQSWQRCRTISIE 260
Query: 368 TGMQSSLLALALANRFF 384
TG Q+ L +A+ F
Sbjct: 261 TGAQNIQLCIAMLQLSF 277
>sp|A6QP84|SOAT_BOVIN Solute carrier family 10 member 6 OS=Bos taurus GN=SLC10A6 PE=2
SV=2
Length = 377
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
+G LMF++G + + +RP I G + QF + P++ Y+ IS S+ P+
Sbjct: 42 IGLLMFSLGCSVEVQKLWGHIRRPWGIAVGMLCQFGLMPLIAYLL-IISFSL----KPLQ 96
Query: 201 A-GIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPL-LSLLLIGKRLP 258
A ++++ C G +SN TF D + LSI MT+ ST A+ + PL L L + L
Sbjct: 97 AIAVLIMGCCPGGTVSNIFTFWVDGDM-DLSISMTTCSTMAALGMMPLCLYLYTLSWNLE 155
Query: 259 VDVKGMVSSI---LQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAI 315
++ +I L +++P+A G+ +N +P+ I L+ GA + +
Sbjct: 156 QNLTIPYQNIGITLVCLIIPVAFGIYVNYRWPKQSKIILKIGAIAGGLLFLVVTGAGMVL 215
Query: 316 NIESVMSPFGLTILLLIIT--FHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQS 372
E S I+LL+I+ F L G+++ L H RT+S ETG Q+
Sbjct: 216 MKEFWSS----DIILLMISFIFPLIGHATGFLLALL----THQSWQRCRTISLETGTQN 266
>sp|Q60414|NTCP2_CRIGR Ileal sodium/bile acid cotransporter OS=Cricetulus griseus
GN=SLC10A2 PE=2 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
L +MF++G N F+ +RP I G++ QF + P+ G++ +SV+ FG+ P+
Sbjct: 42 LALVMFSMGCNVELHKFLGHLRRPWGIVVGFLCQFGIMPLTGFV---LSVA-FGI-LPVQ 96
Query: 201 AGIMLV-SCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPV 259
A ++L+ C G SN + D + LS+ MT+ ST A+ + PL L I ++ V
Sbjct: 97 AVVVLIQGCCPGGTASNILAYWVDGDM-DLSVSMTTCSTLLALGMMPL--CLFIYTKMWV 153
Query: 260 DVKGMV------SSILQIVVVPIAAGLLLNRFFPR 288
D +V + L +V+P++ G+ +N +P+
Sbjct: 154 DSGTIVIPYDSIGTSLVALVIPVSIGMYVNHKWPQ 188
>sp|Q70EX6|SOAT_RAT Solute carrier family 10 member 6 OS=Rattus norvegicus GN=Slc10a6
PE=2 SV=1
Length = 370
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 24/255 (9%)
Query: 138 APALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPT 197
A +G +MF+ G + + +RP I G + QF + P+ Y+ FGL
Sbjct: 39 AVMVGLVMFSFGCSVESRKLWLHLRRPWGIAVGLLCQFGLMPLTAYLLAI----GFGLKP 94
Query: 198 PIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPL-LSLLLIGKR 256
++++ G +SN TF D + LSI MT+ ST A+ + PL L +
Sbjct: 95 FQAIAVLIMGSCPGGTVSNVLTFWVDGDM-DLSISMTTCSTVAALGMMPLCLYVYTRSWT 153
Query: 257 LPVDVKGMVSSI---LQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLS--VLVTACCVGA 311
LP + SI L +VVP+A+G+ +N +P+ I + +L+ G
Sbjct: 154 LPQSLTIPYQSIGITLVSLVVPVASGIYVNYRWPKQATFILKVGAAVGGMLLLVVAVTGV 213
Query: 312 PLA--INIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETG 369
LA NI+ +T+L++ F L V G++ LAF H RT+S ETG
Sbjct: 214 VLAKGWNID-------VTLLVISCIFPLVGHVMGFL---LAFL-THQSWQRCRTISIETG 262
Query: 370 MQSSLLALALANRFF 384
Q+ L +A+ F
Sbjct: 263 AQNIQLCIAMMQLSF 277
>sp|P09131|P3_HUMAN P3 protein OS=Homo sapiens GN=SLC10A3 PE=2 SV=1
Length = 477
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 161 FKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATF 220
+ P + G +GQF+V P+ ++ VF LP + G ++++C S +Y
Sbjct: 220 MQSPQPMLLGLLGQFLVMPLYAFLM----AKVFMLPKALALG-LIITCSSPGGGGSYLFS 274
Query: 221 LTDPPLAPLSIVMTSLSTATAVFVTPLLS-----LLLIGKRLPVDVKGMVSSILQIVVVP 275
L L+I MT LST A PL S LL I + L V + ++ ++L + +P
Sbjct: 275 LLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVPISKILGTLL-FIAIP 333
Query: 276 IAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITF 335
IA G+L+ P+ + + P S ++ + + + +++ L I+L+ IT
Sbjct: 334 IAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGV-FILAGIRLPIVLVGITV 392
Query: 336 HLSAFVAGY-VVTGLAFAEAHDVKALQRTLSYETGMQSSLLALAL 379
L + GY + T L A +RT+S E G+Q+SLLALA+
Sbjct: 393 PLVGLLVGYCLATCLKLPVAQ-----RRTVSIEVGVQNSLLALAM 432
>sp|Q3KNW5|SOAT_HUMAN Solute carrier family 10 member 6 OS=Homo sapiens GN=SLC10A6 PE=1
SV=2
Length = 377
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 141 LGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIG 200
+G LMF++G + + +RP I G + QF + P Y+ IS S+ P+
Sbjct: 42 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLA-ISFSL----KPVQ 96
Query: 201 A-GIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLL-----IG 254
A ++++ C G +SN TF D + LSI MT+ ST A+ + PL L +
Sbjct: 97 AIAVLIMGCCPGGTISNIFTFWVDGDM-DLSISMTTCSTVAALGMMPLCIYLYTWSWSLQ 155
Query: 255 KRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPR 288
+ L + + + L + +P+A G+ +N +P+
Sbjct: 156 QNLTIPYQN-IGITLVCLTIPVAFGVYVNYRWPK 188
>sp|Q0V8N6|P3_BOVIN P3 protein OS=Bos taurus GN=SLC10A3 PE=2 SV=1
Length = 477
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 16/224 (7%)
Query: 161 FKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATF 220
+ P + G +GQF+V P ++ VF LP + G ++++C S +Y
Sbjct: 220 LQNPQPMLLGLLGQFLVMPFYAFLM----AKVFMLPKALALG-LIITCSSPGGGGSYLFS 274
Query: 221 LTDPPLAPLSIVMTSLSTATAVFVTPLLS-----LLLIGKRLPVDVKGMVSSILQIVVVP 275
L L+I MT +ST A PL S LL I + L V V ++ ++L + +P
Sbjct: 275 LLLGGDVTLAISMTFISTVAATGFLPLSSAIYSRLLSIHETLHVPVSKILGTLL-FIAIP 333
Query: 276 IAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITF 335
IAAG+++ P+ + + P S ++ + + + +++ L I+L+ T
Sbjct: 334 IAAGVVIKSKLPKFSQLLLHVIKPFSFVLLLGGLFLAYRMGV-FILAGVRLPIVLVGFTV 392
Query: 336 HLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLALAL 379
L + GY GLA V A +RT+S E G+Q+SLLALA+
Sbjct: 393 PLVGLLVGY---GLATCLKLPV-AQRRTVSIEVGVQNSLLALAM 432
>sp|P21129|P3_MOUSE P3 protein OS=Mus musculus GN=Slc10a3 PE=2 SV=2
Length = 473
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 16/226 (7%)
Query: 159 EAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYA 218
E + P + G +GQF+V P ++ VF LP + G ++++C S +Y
Sbjct: 214 ELLQSPQPMLLGLLGQFLVMPFYAFLMA----KVFMLPKALALG-LIITCSSPGGGGSYL 268
Query: 219 TFLTDPPLAPLSIVMTSLSTATAVFVTPLLS-----LLLIGKRLPVDVKGMVSSILQIVV 273
L L+I MT +ST A PL S LL I + L V + ++ ++L +
Sbjct: 269 FSLLLGGDVTLAISMTFISTVAATGFLPLSSAIYSYLLSIHETLHVPISKILGTLL-FIA 327
Query: 274 VPIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLII 333
+PIAAG+++ P+ + + P S ++ + + + ++ L I+L+
Sbjct: 328 IPIAAGVVIKSKLPKFSELLLQVIKPFSFILLLGGLFLAYHMGV-FILVGVRLPIVLVGF 386
Query: 334 TFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLALAL 379
T L + GY LA V A +RT+S E G+Q+SLLALA+
Sbjct: 387 TVPLVGLLVGY---SLAICLKLPV-AQRRTVSIEVGVQNSLLALAM 428
>sp|Q5PT54|NTCP5_MOUSE Sodium/bile acid cotransporter 5 OS=Mus musculus GN=Slc10a5 PE=1
SV=1
Length = 434
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 161 FKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAG-IMLVSCVSGAQLSNYAT 219
+KRP I G V QF + P G++ I GLP G +M +C G +A
Sbjct: 169 WKRPLPILLGVVIQFFLMPFCGFLLSQI----LGLPKAQAFGFVMTCTCPGGGGGYLFAL 224
Query: 220 FLTDPPLAPLSIVMTSLSTATAVFVTPLLS-----LLLIGKRLPVDVKGMVSSILQIVVV 274
L L+I+MT ST+ A+ + P+ S LL + V V +VS++L +++
Sbjct: 225 LLEGD--VTLAILMTCTSTSLALIMMPVNSYFYSRLLGLAGAFHVPVLKIVSTLL-FILM 281
Query: 275 PIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIIT 334
P++ G+++ P + + PLS+ T VG LA + GL L +
Sbjct: 282 PMSTGVIIKHKMPAKAICLERVVRPLSL--TLMFVGIYLAFRM-------GLVFLRMA-- 330
Query: 335 FHLSAFVAGYVVTGLAFAEAHDVKALQ-------RTLSYETGMQSSLLALALANRFFQDP 387
+L F+ G +V L + + + +T++ ETGM +S LALA+ F P
Sbjct: 331 -NLEVFLLGLLVPALGLLFGYSLAKVYLLPLPVCKTVALETGMLNSFLALAIIQLSFSQP 389
>sp|Q14973|NTCP_HUMAN Sodium/bile acid cotransporter OS=Homo sapiens GN=SLC10A1 PE=2 SV=1
Length = 349
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 143 FLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAG 202
F+M ++G +P + V Q+ + P+ ++ G VF L
Sbjct: 37 FIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLG----KVFRLKNIEALA 92
Query: 203 IMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVD-- 260
I++ C G LSN + + LSIVMT+ ST A+ + PL LL I R D
Sbjct: 93 ILVCGCSPGGNLSNVFSLAMKGDMN-LSIVMTTCSTFCALGMMPL--LLYIYSRGIYDGD 149
Query: 261 ------VKGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPL- 313
KG+V S L +V++P G++L P+ +R + +++ C V +
Sbjct: 150 LKDKVPYKGIVIS-LVLVLIPCTIGIVLKSKRPQY---MRYVIKGGMIIILLCSVAVTVL 205
Query: 314 -AINI-ESVMSPFGLTILLLIITFHLSAFVA---GYVVTGLAFAEAHDVKALQRTLSYET 368
AIN+ +S+M F +T LLI T L F+ GYV++ L +RT+S ET
Sbjct: 206 SAINVGKSIM--FAMTP-LLIATSSLMPFIGFLLGYVLSALFCLNGR----CRRTVSMET 258
Query: 369 GMQSSLLALALANRFFQDPLVSVPPAI 395
G Q+ L + N V+ PP +
Sbjct: 259 GCQNVQLCSTILN-------VAFPPEV 278
>sp|O08705|NTCP_MOUSE Sodium/bile acid cotransporter OS=Mus musculus GN=Slc10a1 PE=2 SV=1
Length = 362
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 41/250 (16%)
Query: 161 FKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATF 220
F +P + V Q+ + P+ ++ G VF L + I++ C G LSN T
Sbjct: 55 FWKPKGVIIAIVAQYGIMPLSAFLLG----KVFHLTSIEALAILICGCSPGGNLSNLFTL 110
Query: 221 LTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGK-------RLPVDVKGMVSSILQIVV 273
+ LSIVMT+ S+ TA+ + PLL L + K + V KG++ S++ +V+
Sbjct: 111 AMKGDMN-LSIVMTTCSSFTALGMMPLL-LYIYSKGIYDGDLKDKVPYKGIMLSLV-MVL 167
Query: 274 VPIAAGLLLN----RFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIES----VMSPFG 325
+P A G+ L + P + A LSV VT V IN+ + VM+P
Sbjct: 168 IPCAIGIFLKSKRPHYVPYVLKAGMIITFSLSVAVTVLSV-----INVGNSIMFVMTPHL 222
Query: 326 LTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLALALANRFFQ 385
L L+ + F+ GY+++ L + +RT+S ETG Q+ L + N
Sbjct: 223 LATSSLM---PFTGFLMGYILSALFRLNP----SCRRTISMETGFQNVQLCSTILN---- 271
Query: 386 DPLVSVPPAI 395
V+ PP +
Sbjct: 272 ---VTFPPEV 278
>sp|P26435|NTCP_RAT Sodium/bile acid cotransporter OS=Rattus norvegicus GN=Slc10a1 PE=2
SV=1
Length = 362
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 38/239 (15%)
Query: 163 RPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLVSCVSGAQLSNYATFLT 222
+P + V QF + P+ ++ G I F L I++ C G LSN T
Sbjct: 57 KPKGVIVALVAQFGIMPLAAFLLGKI----FHLSNIEALAILICGCSPGGNLSNLFTLAM 112
Query: 223 DPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGK-------RLPVDVKGMVSSILQIVVVP 275
+ LSIVMT+ S+ +A+ + PLL L + K + V KG++ S++ IV++P
Sbjct: 113 KGDMN-LSIVMTTCSSFSALGMMPLL-LYVYSKGIYDGDLKDKVPYKGIMISLV-IVLIP 169
Query: 276 IAAGLLLN----RFFPRICNA--IRPFLPPLSVLVTACCVGAPLAINIES----VMSPFG 325
G++L + P I I FL LSV VTA V IN+ + VM+P
Sbjct: 170 CTIGIVLKSKRPHYVPYILKGGMIITFL--LSVAVTALSV-----INVGNSIMFVMTPHL 222
Query: 326 LTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYETGMQSSLLALALANRFF 384
L L+ S F+ GY+++ L + +RT+S ETG Q+ L + N F
Sbjct: 223 LATSSLM---PFSGFLMGYILSALFQLNP----SCRRTISMETGFQNIQLCSTILNVTF 274
>sp|Q5PT55|NTCP5_HUMAN Sodium/bile acid cotransporter 5 OS=Homo sapiens GN=SLC10A5 PE=1
SV=1
Length = 438
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 23/257 (8%)
Query: 147 AVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAGIMLV 206
A G + F +KRP + G V QF + P G++ I LP G+++
Sbjct: 157 AFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQI----VALPEAQAFGVVM- 211
Query: 207 SCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLS-----LLLIGKRLPVDV 261
+C Y L L+I+MT ST A+ + P+ S +L + + V
Sbjct: 212 TCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGTFHIPV 271
Query: 262 KGMVSSILQIVVVPIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESV- 320
+VS++L ++VP++ G+++ P + + + PLS ++ VG L + V
Sbjct: 272 SKIVSTLL-FILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMF--VGIYLTFTVGLVF 328
Query: 321 MSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKA-LQRTLSYETGMQSSLLALAL 379
+ L ++LL + + GY +FA+ + + +T++ E+GM +S LALA+
Sbjct: 329 LKTDNLEVILLGLLVPALGLLFGY-----SFAKVCTLPLPVCKTVAIESGMLNSFLALAV 383
Query: 380 ANRFF---QDPLVSVPP 393
F + L SV P
Sbjct: 384 IQLSFPQSKANLASVAP 400
>sp|Q4JLT5|NTCP5_RAT Sodium/bile acid cotransporter 5 OS=Rattus norvegicus GN=Slc10a5
PE=2 SV=1
Length = 434
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 161 FKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPIGAG-IMLVSCVSGAQLSNYAT 219
+KRP I G V QF + P G++ I GL G +M +C G +A
Sbjct: 169 WKRPLPILLGAVTQFFLMPFCGFLLSQI----LGLSKAQAFGFVMTCTCPGGGGGYLFAL 224
Query: 220 FLTDPPLAPLSIVMTSLSTATAVFVTPLLS-----LLLIGKRLPVDVKGMVSSILQIVVV 274
L L+I+M ST+ A+ + P+ S LL + V V +VS++L ++
Sbjct: 225 LLEGD--VTLAILMACTSTSLALIMMPVNSYLYSCLLGLAGVFHVPVLKIVSTLL-FILT 281
Query: 275 PIAAGLLLNRFFPRICNAIRPFLPPLSVLVTACCVGAPLAINIESV-MSPFGLTILLLII 333
P++ G+++ P+ + + PLS +T VG LA + V + L + LL +
Sbjct: 282 PVSIGIVIKHRMPKKAVCLERVVQPLS--LTLMLVGVYLAFRMGLVFLRMANLEVFLLGL 339
Query: 334 TFHLSAFVAGYVVTGLAFAEAHDVKA-LQRTLSYETGMQSSLLALAL 379
+ F GY +FA+ + + + +T++ E+GM +S LALA+
Sbjct: 340 LVPVLGFSFGY-----SFAKVYLLPLPVCKTVAIESGMLNSFLALAI 381
>sp|Q3UEZ8|NTCP4_MOUSE Sodium/bile acid cotransporter 4 OS=Mus musculus GN=Slc10a4 PE=2
SV=1
Length = 437
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 106/263 (40%), Gaps = 37/263 (14%)
Query: 140 ALGFLMFAVGVNSSEKDFIEAFKRPAAIFAGYVGQFVVKPILGYIFGTISVSVFGLPTPI 199
AL M +G F +RP + QF + + +F L
Sbjct: 112 ALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFL----PLLAFLLALIFKLDEVA 167
Query: 200 GAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPV 259
++L C G LSN + L D + LSI+MT ST A+ + PL L I R +
Sbjct: 168 AVAVLLCGCCPGGNLSNLMSLLVDGDMN-LSIIMTISSTLLALVLMPLC--LWIYSRAWI 224
Query: 260 DVK-------GMVSSILQIVVVPIAAGLLLNRFFPRICNAI-----RPFLPPLSVL--VT 305
+ G V+ L ++PI G+ + + R+ + I L L VL +T
Sbjct: 225 NTPLVQLLPLGAVTLTLCSTLIPIGLGVFIRYKYNRVADYIVKVSLWSLLVTLVVLFIMT 284
Query: 306 ACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLS 365
+G L +I + T+ ++ I L+ + +GY GLA H +RT+
Sbjct: 285 GTMLGPELLASIPA-------TVYVVAIFMPLAGYASGY---GLA-TLFHLPPNCKRTVC 333
Query: 366 YETGMQ-----SSLLALALANRF 383
ETG Q +++L LA RF
Sbjct: 334 LETGSQNVQLCTAILKLAFPPRF 356
>sp|Q5PT56|NTCP4_RAT Sodium/bile acid cotransporter 4 OS=Rattus norvegicus GN=Slc10a4
PE=2 SV=1
Length = 437
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 203 IMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLLIGKRLPVDVK 262
++L C G LSN + L D + LSI+MT ST A+ + PL L I R ++
Sbjct: 171 VLLCGCCPGGNLSNLMSLLVDGDMN-LSIIMTISSTLLALVLMPL--CLWIYSRAWINTP 227
Query: 263 -------GMVSSILQIVVVPIAAGLLLNRFFPRICNAIRP-----FLPPLSVL--VTACC 308
G V+ L ++PI G+ + + R+ + I L L VL +T
Sbjct: 228 LVQLLPLGAVTLTLCSTLIPIGLGVFIRYKYNRVADYIVKVSLCSLLVTLVVLFIMTGTM 287
Query: 309 VGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYET 368
+G L +I + + ++ I L+ + +GY GLA H +RT+ ET
Sbjct: 288 LGPELLASIPAA-------VYVVAIFMPLAGYASGY---GLA-TLFHLPPNCKRTVCLET 336
Query: 369 GMQ-----SSLLALALANRFF 384
G Q +++L LA RF
Sbjct: 337 GSQNVQLCTAILKLAFPPRFI 357
>sp|Q96EP9|NTCP4_HUMAN Sodium/bile acid cotransporter 4 OS=Homo sapiens GN=SLC10A4 PE=2
SV=2
Length = 437
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 30/197 (15%)
Query: 203 IMLVSCVSGAQLSNYATFLTDPPLAPLSIVMTSLSTATAVFVTPLLSLLL--------IG 254
++L C G LSN + L D + LSI+MT ST A+ + PL + I
Sbjct: 171 VLLCGCCPGGNLSNLMSLLVDGDMN-LSIIMTISSTLLALVLMPLCLWIYSWAWINTPIV 229
Query: 255 KRLPVDVKGMVSSILQIVVVPIAAGLLLNRFFPRICNAI-----RPFLPPLSVL--VTAC 307
+ LP+ G V+ L ++PI G+ + + R+ + I L L VL +T
Sbjct: 230 QLLPL---GTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGT 286
Query: 308 CVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVTGLAFAEAHDVKALQRTLSYE 367
+G L +I + + ++ I L+ + +GY GLA H +RT+ E
Sbjct: 287 MLGPELLASIPA-------AVYVIAIFMPLAGYASGY---GLA-TLFHLPPNCKRTVCLE 335
Query: 368 TGMQSSLLALALANRFF 384
TG Q+ L A+ F
Sbjct: 336 TGSQNVQLCTAILKLAF 352
>sp|P55190|YBAS_BACSU Uncharacterized protein YbaS OS=Bacillus subtilis (strain 168)
GN=ybaS PE=4 SV=3
Length = 306
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 229 LSIVMTSLSTATAVFVTPLLSLLLIGKRLPVDVKGMVSSILQIVVVPIAAGLLLNRF-FP 287
LSI++ + T + + PL LL G ++ +DV GM+ ++ +VV+P G+L N+ P
Sbjct: 116 LSIIL--VDTVLSPLIVPLSLSLLAGAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSP 173
Query: 288 RICNAIRPFLPPLSVLVTACCVGAPLAINIESVMSPFGLTILLLIITFHLSAFVAGYVVT 347
+ L P S L C+ A +AIN S ++P+ +I L ++ F
Sbjct: 174 ERTAFVSSALSPFSKL----CLMAVIAIN-SSAIAPYFKSIDLRFAGIAVTVFFIALTGY 228
Query: 348 GLAFAEAHDVKALQR---TLSYETGMQSSLLALALANRFFQDPLVSVPPAIS----TVIM 400
A+ +K Q +L + GM++ LA FF V+VP I ++
Sbjct: 229 AAAWLIGKMMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQ-VAVPVVIGMLFQQILA 287
Query: 401 SLMGFFL 407
+L G+ L
Sbjct: 288 ALFGYML 294
>sp|Q8CQ67|VRAA_STAES Putative long chain fatty acid-CoA ligase VraA OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=vraA PE=3 SV=1
Length = 411
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 196 PTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIV--MTSLSTATAVFVTPLLSLLLI 253
P P+ + L +C+ LS TF+ PLS++ + L+ ATA+FV P + LI
Sbjct: 169 PGPLSHSLSLYACIYA--LSTGKTFIGQKNFNPLSLMRLINQLNKATAIFVVPTMVQQLI 226
Query: 254 G-KRLPVDVKGMVSS 267
+R +K ++SS
Sbjct: 227 STQRHCSSIKSILSS 241
>sp|Q5HRH4|VRAA_STAEQ Putative long chain fatty acid-CoA ligase VraA OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=vraA PE=3
SV=1
Length = 453
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 196 PTPIGAGIMLVSCVSGAQLSNYATFLTDPPLAPLSIV--MTSLSTATAVFVTPLLSLLLI 253
P P+ + L +C+ LS TF+ PLS++ + L+ ATA+FV P + LI
Sbjct: 169 PGPLSHSLSLYACIYA--LSTGKTFIGQKNFNPLSLMRLINQLNKATAIFVVPTMVQQLI 226
Query: 254 G-KRLPVDVKGMVSS 267
+R +K ++SS
Sbjct: 227 STQRHCSSIKSILSS 241
>sp|Q54DR1|FDFT_DICDI Squalene synthase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1
Length = 416
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 127 PSFTWFTARYYAPALGFLMFAVGVNSSEKDFIEAFKRPAAIFAG 170
P T F+ Y P G+ +F G+N+ EK+ +E F + +F G
Sbjct: 93 PVLTSFSEGLYQP--GYKVFGYGMNNDEKNLVENFDKVVDVFLG 134
>sp|Q972C0|GCSPB_SULTO Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 /
NBRC 100140 / 7) GN=gcvPB PE=3 SV=1
Length = 505
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 355 HDVKALQRTLSYETGMQSSLLALALANRFFQDPLVSVPPAISTVIM 400
H+V +TL+ ETG+ ++ +A AL +R F P + PP + +M
Sbjct: 385 HEVVFSAKTLAKETGVTANDVAKALLDRGFYAPTIYFPPNVEEALM 430
>sp|Q5NGK7|Y829_FRATT Uncharacterized transporter FTT_0829c OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=FTT_0829c
PE=3 SV=1
Length = 571
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 180 ILGYIFGTISVSVFGLPTPIGAGI 203
+LGYIFG IS ++FG+ +GAG+
Sbjct: 399 VLGYIFGLISFNIFGISITLGAGV 422
>sp|Q17QW0|DJC22_BOVIN DnaJ homolog subfamily C member 22 OS=Bos taurus GN=DNAJC22 PE=2
SV=2
Length = 347
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 20/85 (23%)
Query: 174 QFVVKPILGYIFGTI---------SVSVFGLPTPIGAGIMLVSCVSGAQLSNY-----AT 219
+FV + I+G FG + S + GLP +G G++LV+ V G Q S+ A
Sbjct: 80 RFVAQMIVGMYFGLVALISLSFMASFYIVGLPLAVGLGVLLVAAV-GNQTSDLKNTLGAA 138
Query: 220 FLTDP-----PLAPLSIVMTSLSTA 239
FLT P P+A L I + + TA
Sbjct: 139 FLTSPIFYGRPIAILPISLAASITA 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,052,426
Number of Sequences: 539616
Number of extensions: 5272433
Number of successful extensions: 17773
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 17664
Number of HSP's gapped (non-prelim): 75
length of query: 416
length of database: 191,569,459
effective HSP length: 120
effective length of query: 296
effective length of database: 126,815,539
effective search space: 37537399544
effective search space used: 37537399544
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)