Query 014895
Match_columns 416
No_of_seqs 161 out of 597
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 03:02:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x6v_B Bifunctional 3'-phospho 100.0 1E-115 4E-120 934.1 35.1 345 65-413 224-570 (630)
2 1r6x_A ATP:sulfate adenylyltra 100.0 1E-114 4E-119 882.6 30.8 332 67-413 2-337 (395)
3 1g8f_A Sulfate adenylyltransfe 100.0 4E-111 1E-115 881.5 29.8 335 65-414 1-339 (511)
4 1m8p_A Sulfate adenylyltransfe 100.0 1E-106 5E-111 856.3 27.9 336 65-414 2-341 (573)
5 3cr8_A Sulfate adenylyltranfer 100.0 2E-104 5E-109 837.9 23.7 312 63-414 3-314 (552)
6 1jhd_A Sulfate adenylyltransfe 100.0 7E-104 2E-108 804.2 25.0 330 65-413 1-340 (396)
7 2gks_A Bifunctional SAT/APS ki 100.0 1E-102 4E-107 822.2 29.6 314 88-414 2-315 (546)
8 1v47_A ATP sulfurylase; produc 100.0 2.3E-97 8E-102 745.8 27.1 296 91-413 3-298 (349)
9 1od6_A PPAT, phosphopantethein 96.7 0.0086 2.9E-07 52.0 10.1 83 263-367 8-92 (160)
10 1qjc_A Phosphopantetheine aden 96.3 0.052 1.8E-06 46.8 12.0 84 262-367 8-91 (158)
11 1k4m_A NAMN adenylyltransferas 95.9 0.027 9.1E-07 51.6 9.0 97 259-367 7-110 (213)
12 1ej2_A Nicotinamide mononucleo 95.9 0.069 2.4E-06 47.7 11.3 97 259-367 7-107 (181)
13 1o6b_A Phosphopantetheine aden 95.5 0.13 4.4E-06 45.1 11.2 89 258-368 5-93 (169)
14 1kam_A Deamido-NAD(+), nicotin 95.2 0.14 4.8E-06 46.0 11.0 100 258-368 10-115 (194)
15 2x0k_A Riboflavin biosynthesis 94.4 0.078 2.7E-06 52.8 7.5 131 257-406 17-155 (338)
16 2qtr_A Nicotinate (nicotinamid 94.3 0.05 1.7E-06 48.4 5.3 96 259-368 6-110 (189)
17 1f9a_A Hypothetical protein MJ 93.7 0.29 9.9E-06 43.1 9.1 89 263-366 8-100 (168)
18 3f3m_A Phosphopantetheine aden 93.5 0.29 9.8E-06 44.0 8.8 82 263-366 11-92 (168)
19 2b7l_A Glycerol-3-phosphate cy 93.3 0.48 1.6E-05 39.7 9.4 88 258-368 4-96 (132)
20 1vlh_A Phosphopantetheine aden 93.0 0.57 1.9E-05 41.7 9.9 80 263-364 20-99 (173)
21 3gmi_A UPF0348 protein MJ0951; 92.9 0.35 1.2E-05 48.6 9.2 95 256-365 53-151 (357)
22 3nd5_A Phosphopantetheine aden 92.7 0.4 1.4E-05 43.1 8.5 82 263-366 10-92 (171)
23 3k9w_A Phosphopantetheine aden 92.5 0.75 2.6E-05 42.0 10.2 89 256-366 23-111 (187)
24 4f3r_A Phosphopantetheine aden 92.4 0.36 1.2E-05 43.0 7.7 85 259-366 9-93 (162)
25 2qjt_B Nicotinamide-nucleotide 91.9 0.45 1.5E-05 45.9 8.4 93 263-366 15-116 (352)
26 3nbk_A Phosphopantetheine aden 89.9 3 0.0001 37.8 11.3 85 258-364 24-108 (177)
27 1yum_A 'probable nicotinate-nu 89.7 2 6.9E-05 40.3 10.4 94 262-366 30-129 (242)
28 1mrz_A Riboflavin kinase/FMN a 89.5 0.99 3.4E-05 44.0 8.4 95 259-368 3-103 (293)
29 1coz_A Protein (glycerol-3-pho 89.0 1.3 4.5E-05 36.7 7.7 88 258-368 4-96 (129)
30 3glv_A Lipopolysaccharide core 88.7 0.33 1.1E-05 41.8 3.9 90 256-367 3-95 (143)
31 3nv7_A Phosphopantetheine aden 88.6 1.2 4.2E-05 39.4 7.6 83 262-366 9-91 (157)
32 2qjo_A Bifunctional NMN adenyl 86.7 0.48 1.6E-05 45.2 4.0 96 261-368 13-116 (341)
33 3op1_A Macrolide-efflux protei 85.8 0.88 3E-05 44.8 5.5 102 256-367 21-132 (308)
34 1lw7_A Transcriptional regulat 85.0 5.1 0.00017 39.0 10.5 88 263-360 10-113 (365)
35 3do8_A Phosphopantetheine aden 81.9 1.2 4.3E-05 38.9 4.2 53 263-321 8-65 (148)
36 1nup_A FKSG76; NAD biosynthesi 80.4 3.5 0.00012 38.7 7.0 63 258-320 9-73 (252)
37 2h29_A Probable nicotinate-nuc 76.2 6.4 0.00022 34.8 7.2 94 262-367 9-109 (189)
38 2ejc_A Pantoate--beta-alanine 73.7 2.5 8.6E-05 41.1 4.0 55 241-299 5-62 (280)
39 3h05_A Uncharacterized protein 70.6 3.6 0.00012 36.9 4.1 108 263-392 10-126 (177)
40 1kqn_A Nmnat, nicotinamide mon 69.1 16 0.00054 35.0 8.5 81 258-344 11-93 (279)
41 3elb_A Ethanolamine-phosphate 68.9 5.1 0.00017 39.9 5.1 91 256-369 8-103 (341)
42 3uk2_A Pantothenate synthetase 68.8 1.6 5.6E-05 42.6 1.5 62 240-307 8-69 (283)
43 3v67_A Sensor protein CPXA; PA 66.7 3.9 0.00013 35.7 3.3 55 163-226 54-110 (138)
44 3n8h_A Pantothenate synthetase 66.1 6.1 0.00021 38.3 4.8 56 239-297 6-62 (264)
45 3inn_A Pantothenate synthetase 66.0 4.2 0.00014 40.3 3.7 65 240-308 25-91 (314)
46 3q12_A Pantoate--beta-alanine 59.9 4.7 0.00016 39.5 2.8 54 240-297 7-63 (287)
47 3ag6_A Pantothenate synthetase 59.8 5.3 0.00018 38.9 3.2 61 240-307 5-70 (283)
48 1v8f_A Pantoate-beta-alanine l 58.8 3.6 0.00012 40.0 1.8 60 240-306 4-63 (276)
49 3hl4_A Choline-phosphate cytid 58.0 24 0.00082 33.5 7.3 108 239-367 60-172 (236)
50 3mxt_A Pantothenate synthetase 52.0 7.2 0.00025 38.1 2.7 63 240-307 7-71 (285)
51 3elb_A Ethanolamine-phosphate 49.7 11 0.00037 37.5 3.6 94 254-370 197-299 (341)
52 2ts1_A Tyrosyl-tRNA synthetase 36.1 1.8E+02 0.006 29.6 10.1 44 242-286 18-62 (419)
53 1xvq_A Thiol peroxidase; thior 34.4 72 0.0025 27.0 6.1 57 146-202 100-168 (175)
54 2yxn_A Tyrosyl-tRNA synthetase 29.2 1.8E+02 0.0063 28.1 8.6 44 242-286 21-65 (322)
55 3gl3_A Putative thiol:disulfid 27.2 1.2E+02 0.004 24.2 5.9 62 146-207 86-150 (152)
56 3cov_A Pantothenate synthetase 25.0 27 0.00092 34.3 1.7 55 240-298 15-73 (301)
57 1n8j_A AHPC, alkyl hydroperoxi 24.8 1.4E+02 0.0049 25.5 6.4 39 145-183 91-137 (186)
58 3ctu_A CBS domain protein; str 24.6 47 0.0016 27.2 3.0 31 158-188 109-139 (156)
59 3k6e_A CBS domain protein; str 23.9 42 0.0014 28.3 2.6 30 158-187 109-138 (156)
60 1jil_A Tyrrs, tyrosyl-tRNA syn 22.4 1.6E+02 0.0054 29.8 6.9 44 242-286 20-64 (420)
61 1t62_A Conserved hypothetical 21.2 74 0.0025 28.6 3.7 27 162-188 67-93 (166)
62 3jtf_A Magnesium and cobalt ef 20.8 51 0.0017 26.2 2.4 22 165-186 100-121 (129)
63 1yav_A Hypothetical protein BS 20.0 84 0.0029 25.7 3.7 33 156-188 107-139 (159)
No 1
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=100.00 E-value=1.2e-115 Score=934.15 Aligned_cols=345 Identities=57% Similarity=1.008 Sum_probs=331.4
Q ss_pred CcCCCCcc--ccccccCchhhhhHHHHhcCCCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCe
Q 014895 65 LIEPDGGV--LVDLVVPESERGLRTTEAESMPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSI 142 (416)
Q Consensus 65 ~i~PhGg~--Lv~l~v~~~~~~~l~~~a~~LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~ 142 (416)
.+.||||+ |++|+|+++++++++++|++||+|.||++++||||||++|+||||+||||++||+||+ ++|||+||..
T Consensus 224 ~~ip~G~~~~l~~l~v~~~~~~~~~~~a~~l~~i~l~~~~~~dlell~~G~fsPL~GfM~~~dy~~v~--~~~~l~~g~~ 301 (630)
T 1x6v_B 224 DIVPVDASYEVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCL--HFDCLLDGGV 301 (630)
T ss_dssp TSSCCCCCCSCCCCBCCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCSSCCHHHHHHHH--HHSEECTTSC
T ss_pred CcccccCcccceecccChHHHHHHHHhhccCCEEEECHHHHHHHHHHhcCCccCchhhCCHHHHHHHH--HhCEeCCCCe
Confidence 35799966 9999999999999999999999999999999999999999999999999999999999 7999999742
Q ss_pred eccceeEEEecChHHHhhcCCCCeEEEeCCCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEEEe
Q 014895 143 VNMSLPIVLAIDDETKERIGSTTNVALLGPTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLVGG 222 (416)
Q Consensus 143 ~~wpiPItL~V~~e~a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG 222 (416)
++|||||||+|++|++++|++|++|+| +++|+++|+|+|+|+|++||++||++||||+|++||||++++. +|+|+|||
T Consensus 302 ~~~~iPi~L~v~~~~~~~l~~g~~v~L-~~~g~~~a~l~v~e~~~~dk~~~a~~v~gt~d~~HPgv~~~~~-~g~~~vgG 379 (630)
T 1x6v_B 302 INLSVPIVLTATHEDKERLDGCTAFAL-MYEGRRVAILRNPEFFEHRKEERCARQWGTTCKNHPYIKMVME-QGDWLIGG 379 (630)
T ss_dssp EECCSCCCEEECHHHHHHHTTCSEEEE-EETTEEEEEEEEEEEEECCHHHHHHHHHSCCCTTSHHHHHHHH-SCSEEEEE
T ss_pred eeeeeEEEEeCCHHHHhhCCCCCEEEE-ccCCeEEEEEEeeEEEecCHHHHHHHHhCCCCCCCcchHHHHh-CCCEEEEe
Confidence 238999999999999999999999999 6899999999999999999999999999999999999999875 69999999
Q ss_pred eEEEecCCCCCCCcccCCCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCC
Q 014895 223 DLEVLKPIKYNDGLDHYRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTK 302 (416)
Q Consensus 223 ~i~~l~~~~~~~~f~~~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK 302 (416)
+|+++++|.|+++|++||+||+|+|+.|+++||++|||||||||+|||||+|||+|++.+.+.|+++++|||||++|+||
T Consensus 380 ~i~~l~~~~~~~~~~~~~~tP~e~r~~f~~~gw~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~G~tk 459 (630)
T 1x6v_B 380 DLQVLDRVYWNDGLDQYRLTPTELKQKFKDMNADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGWTK 459 (630)
T ss_dssp EEEECSCCCCCSSCGGGCCCHHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSCCC
T ss_pred EEEEEecCcccccchhhcCCHHHHHHHHHHcCCCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCcCCCC
Confidence 99999998888889999999999999999999999999999999999999999999887777788889999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCC
Q 014895 303 ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDP 382 (416)
Q Consensus 303 ~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y~~ 382 (416)
+||||+++||+||++++++||||+++++|++||++|||||||||+||||+|||||||||||||||||||+++++.+|||+
T Consensus 460 ~~di~~~~r~~~~~~~~~~~y~p~~~~~l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhAG~g~~~~~~~~Y~~ 539 (630)
T 1x6v_B 460 DDDVPLMWRMKQHAAVLEEGVLNPETTVVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAGMPHPETGKDLYEP 539 (630)
T ss_dssp TTSCCHHHHHHHHHHHHHTTSSCGGGEEECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTTCCBCTTTCSBSSCT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCcceEEeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCCCCCCCCCccccCCc
Confidence 99999999999999999768999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhhcCCCceeEeeeeeeeeeeccC
Q 014895 383 DHGKKVLSMALGLEKLNILPFRVGIIVHFNS 413 (416)
Q Consensus 383 ~~aq~i~~~~~~~~~i~i~p~~~~~Y~~~~~ 413 (416)
|+||+||+.++++.+|+|+||++++||++|+
T Consensus 540 ~~aq~i~~~~~~~l~i~~~~~~~~~Y~~~~~ 570 (630)
T 1x6v_B 540 SHGAKVLTMAPGLITLEIVPFRVAAYNKKKK 570 (630)
T ss_dssp THHHHHHHHCTTCTTCEEEECCCEEEETTTT
T ss_pred chHHHHHhcCcccCCceEEEcceeEEEcccC
Confidence 9999999988888999999999999999997
No 2
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=1e-114 Score=882.55 Aligned_cols=332 Identities=31% Similarity=0.511 Sum_probs=315.6
Q ss_pred CCCCccccccccCchhh-hhHHHHhcC--CCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCee
Q 014895 67 EPDGGVLVDLVVPESER-GLRTTEAES--MPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSIV 143 (416)
Q Consensus 67 ~PhGg~Lv~l~v~~~~~-~~l~~~a~~--LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~~ 143 (416)
.||||+|++|+|+++++ ++++++|++ ||+|+||++++||||||++|+||||+||||++||+||+ ++|||+||++
T Consensus 2 ~phgg~l~~l~v~~~~~~~~~~~~a~~~~lp~i~l~~~~l~dlell~~G~fsPL~GFM~~~dy~~V~--~~~rL~dG~~- 78 (395)
T 1r6x_A 2 APHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGTL- 78 (395)
T ss_dssp CCTTSSCCBHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHBTTTTTCCEECCHHHHHHHH--HHSBCTTSCB-
T ss_pred cCCCccccccccCchHHhHHHHHHhhcCCCCeEEcCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC-
Confidence 59999999999987754 559999999 99999999999999999999999999999999999999 7999999997
Q ss_pred ccceeEEEecChHHHhhcCCCCeEEEeCCCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEEEee
Q 014895 144 NMSLPIVLAIDDETKERIGSTTNVALLGPTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLVGGD 223 (416)
Q Consensus 144 ~wpiPItL~V~~e~a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~ 223 (416)
|||||||+|++|++++|++|++|+|+|++|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|||+
T Consensus 79 -wpiPI~L~v~~e~~~~l~~g~~vaL~~~~g~~~ail~v~e~y~~dk~~~a~~vfg-~d~~HPgV~~~~~~~g~~~vgG~ 156 (395)
T 1r6x_A 79 -WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAEKVFR-GDPEHPAISYLFNVAGDYYVGGS 156 (395)
T ss_dssp -CCSCCCEEECHHHHHTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEEEE
T ss_pred -cceEEEEeCCHHHHhhcCCCCEEEEEcCCCceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhcCCEEEEEE
Confidence 8999999999999999999999999999999999999999999999999999999 99999999999865699999999
Q ss_pred EEEecCCCCCCCcccCCCCHHHHHHHHHhcCCCeEEEeecCCCCchhH-HHHHHHHHHHHHHcCCCCCeEEEccccCCCC
Q 014895 224 LEVLKPIKYNDGLDHYRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGH-ALLMNDTRRRLLEMGYKNPILLLHPLGGFTK 302 (416)
Q Consensus 224 i~~l~~~~~~~~f~~~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaH-E~l~r~a~~~ale~~~~~~~lLl~PlvG~tK 302 (416)
|+++++|.|+ +|++||+||+|+|+.|+++||++|||||||||+|||| |+++|. |+|. +++|||||++|+||
T Consensus 157 v~~l~~~~~~-df~~~r~tP~e~R~~f~~~gw~~VvafqtrNP~HraH~e~~~r~----a~e~---~~~lllhPlvG~tK 228 (395)
T 1r6x_A 157 LEAIQLPQHY-DYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVRA----AREA---NAKVLIHPVVGLTK 228 (395)
T ss_dssp EEESCCCCCC-SSTTCSCCHHHHHHHHHHTTCCCEEEECCSSCCCHHHHHHHHHH----HHHT---TCEEEECCBCSBCC
T ss_pred EEEEecCCcC-CchhhcCCHHHHHHHHHhcCCCcEEEeccCCCcchhhHHHHHHH----HHHc---CCcEEEEECCCCCC
Confidence 9999988886 6999999999999999999999999999999999999 777653 4565 38999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCC
Q 014895 303 ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDP 382 (416)
Q Consensus 303 ~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y~~ 382 (416)
+||+|+++||+||+++++ +| |+++++|+++|++|||||||||+||||+|||||||||||||||||||+++++.+||++
T Consensus 229 ~~Dip~~vR~~~~~~~l~-~y-p~~~v~l~~~p~~mryAGPrEai~HAiiRkN~GcthfIVGRDhAG~g~~~~~~d~Y~~ 306 (395)
T 1r6x_A 229 PGDIDHHTRVRVYQEIIK-RY-PNGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGP 306 (395)
T ss_dssp TTCCCHHHHHHHHHHHGG-GS-STTCEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCT
T ss_pred CCCCCHHHHHHHHHHHHH-hC-CCccEEEEecchhhhhcCcHHHHHHHHHHHHcCCceEEECCCCCCCCCCCcccccCCc
Confidence 999999999999999996 45 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhhcCCCceeEeeeeeeeeeeccC
Q 014895 383 DHGKKVLSMALGLEKLNILPFRVGIIVHFNS 413 (416)
Q Consensus 383 ~~aq~i~~~~~~~~~i~i~p~~~~~Y~~~~~ 413 (416)
|+||+||++++++.+|+|++|++++||++|+
T Consensus 307 ~~aq~i~~~~~~el~I~~v~f~~~~Y~~~~~ 337 (395)
T 1r6x_A 307 YDAQELVESYKHELDIEVVPFRMVTYLPDED 337 (395)
T ss_dssp THHHHHHHHHHHHHTCEEEECCCEEEEGGGT
T ss_pred chHHHHHHhchhccCceEEEecceEEecccC
Confidence 9999999999777899999999999999986
No 3
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=100.00 E-value=3.9e-111 Score=881.46 Aligned_cols=335 Identities=30% Similarity=0.505 Sum_probs=316.9
Q ss_pred CcCCCCccccccccCchhh-hhHHHHhcC--CCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCC
Q 014895 65 LIEPDGGVLVDLVVPESER-GLRTTEAES--MPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGS 141 (416)
Q Consensus 65 ~i~PhGg~Lv~l~v~~~~~-~~l~~~a~~--LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~ 141 (416)
|+.||||+|++|+++++++ ++++++|++ ||+|+||+++++|||||++|+||||+||||++||+||+ ++|||+||+
T Consensus 1 ~~~phgg~l~~~~~~~~~~~~~~~~~a~~~~lp~i~l~~~~~~dlell~~G~fsPL~GfM~~~d~~~v~--~~~rl~~G~ 78 (511)
T 1g8f_A 1 MPAPHGGILQDLIARDALKKNELLSEAQSSDILVWNLTPRQLCDIELILNGGFSPLTGFLNENDYSSVV--TDSRLADGT 78 (511)
T ss_dssp -CCCTTSSCCCHHHHTGGGHHHHHHHHTCTTSEEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTCC
T ss_pred CCCCCCCeeeccccCchhhhHHHHHHhhcCCCCeEEcCHHHHHHHHHHhcCCccCccccCCHHHHHHHH--HhCcCCCCC
Confidence 4689999999999877754 559999999 99999999999999999999999999999999999999 799999998
Q ss_pred eeccceeEEEecChHHHhhcCCCCeEEEeCCCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEEE
Q 014895 142 IVNMSLPIVLAIDDETKERIGSTTNVALLGPTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLVG 221 (416)
Q Consensus 142 ~~~wpiPItL~V~~e~a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vg 221 (416)
+ |||||||+|++|++++|++|++|+|+|++|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+||
T Consensus 79 ~--w~iPi~L~v~~~~~~~l~~g~~v~L~~~~g~~~a~l~v~e~~~~dk~~~~~~v~g-~d~~HPgv~~~~~~~g~~~v~ 155 (511)
T 1g8f_A 79 L--WTIPITLDVDEAFANQIKPDTRIALFQDDEIPIAILTVQDVYKPNKTIEAERVFR-GDPEHPAISYLFNVAGDYYVG 155 (511)
T ss_dssp B--CCSCCCEEECHHHHTTCCTTCEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHC-SCTTSHHHHHHHHTSCSEEEE
T ss_pred C--cceeEEEeCCHHHHhhccCCCEEEEECCCCceEEEEEeeeeeccChHHHHHHHhC-CCcCCccHHHHHhhCCCEEEE
Confidence 7 8999999999999999999999999999999999999999999999999999999 999999999998656999999
Q ss_pred eeEEEecCCCCCCCcccCCCCHHHHHHHHHhcCCCeEEEeecCCCCchhH-HHHHHHHHHHHHHcCCCCCeEEEccccCC
Q 014895 222 GDLEVLKPIKYNDGLDHYRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGH-ALLMNDTRRRLLEMGYKNPILLLHPLGGF 300 (416)
Q Consensus 222 G~i~~l~~~~~~~~f~~~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaH-E~l~r~a~~~ale~~~~~~~lLl~PlvG~ 300 (416)
|+|+++++|.|+ +|++||+||+|+|+.|+++||++|||||||||+|||| |+++|. |+|.+ ++|||||++|+
T Consensus 156 G~v~~l~~~~~~-~~~~~~~tP~e~r~~f~~~gw~~v~afqtrnP~HraH~e~~~~~----a~e~~---~~lll~pl~g~ 227 (511)
T 1g8f_A 156 GSLEAIQLPQHY-DYPGLRKTPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVRA----AREAN---AKVLIHPVVGL 227 (511)
T ss_dssp EEEEESCCCCCC-SCTTTCCCHHHHHHHHHHTTCCCEEEEEESSCCCHHHHHHHHHH----HHHHT---CEEEEEEBCSB
T ss_pred EEEEEEecCCcC-CchhhcCCHHHHHHHHHHcCCCcEEEEecCCCCchHHHHHHHHH----HHHcC---CcEEEEECCCC
Confidence 999999988876 6999999999999999999999999999999999999 777764 44553 89999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCC
Q 014895 301 TKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLY 380 (416)
Q Consensus 301 tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y 380 (416)
||+||+|+++||+||+++++ +| |+++++|+++|++|||||||||+||||+|||||||||||||||||||+++++.+||
T Consensus 228 ~k~~di~~~~r~~~~~~~~~-~y-p~~~~~l~~~p~~m~yaGprea~~hai~r~n~G~th~IvGrdhAg~g~~~~~~~~Y 305 (511)
T 1g8f_A 228 TKPGDIDHHTRVRVYQEIIK-RY-PNGIAFLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFY 305 (511)
T ss_dssp CSTTCCCHHHHHHHHHHHGG-GS-CTTSEEECCBCCBCCCCHHHHHHHHHHHHHHTTCSEEECCTTTTCCCBCTTSCBSS
T ss_pred CCCCCCCHHHHHHHHHHHHH-hC-CcccEEEEecchhhhccCcHHHHHHHHHHHhCCCceEEeCCCCCCCCCCCcccccC
Confidence 99999999999999999996 45 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHhhcCCCceeEeeeeeeeeeeccCC
Q 014895 381 DPDHGKKVLSMALGLEKLNILPFRVGIIVHFNSS 414 (416)
Q Consensus 381 ~~~~aq~i~~~~~~~~~i~i~p~~~~~Y~~~~~~ 414 (416)
++|+||+||++++++.+|++++|..++||++|.+
T Consensus 306 ~~~~aq~i~~~~~~~l~i~pv~fd~~~y~~~~g~ 339 (511)
T 1g8f_A 306 GPYDAQELVESYKHELDIEVVPFRMVTYLPDEDR 339 (511)
T ss_dssp CTTHHHHHHHHTHHHHCSEEECCCCEEEEGGGTE
T ss_pred CcchHHHHHHhCccccCceEEeecceeEecccCe
Confidence 9999999999997778999999999999999864
No 4
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=100.00 E-value=1.3e-106 Score=856.34 Aligned_cols=336 Identities=27% Similarity=0.445 Sum_probs=320.6
Q ss_pred CcCCCCccccccccCc-hhhhhHHHHhcCCCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCee
Q 014895 65 LIEPDGGVLVDLVVPE-SERGLRTTEAESMPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSIV 143 (416)
Q Consensus 65 ~i~PhGg~Lv~l~v~~-~~~~~l~~~a~~LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~~ 143 (416)
|+.||||+|++|+|++ +++++++++|++||+|+||+++++|||||++|+||||+|||+++||+||+ ++|||+||++
T Consensus 2 ~~~phgg~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dl~~l~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~- 78 (573)
T 1m8p_A 2 ANAPHGGVLKDLLARDAPRQAELAAEAESLPAVTLTERQLCDLELIMNGGFSPLEGFMNQADYDRVC--EDNRLADGNV- 78 (573)
T ss_dssp CSCCSTTSCCCHHHHTSTTHHHHHHHHTTSCEEEECHHHHHHHHHHHTSTTTTCCEECCHHHHHHHH--HHSBCTTSCB-
T ss_pred CCCCCCCcccccccCchHHHHHHHHHhccCCeEEeCHHHHHHHHHHhcCCcCCCcccCCHHHHHHHH--HhCcCCCCCC-
Confidence 5689999999999998 88999999999999999999999999999999999999999999999999 7999999987
Q ss_pred ccceeEEEecChHHHhhc--CCCCeEEEeC-CCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEE
Q 014895 144 NMSLPIVLAIDDETKERI--GSTTNVALLG-PTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLV 220 (416)
Q Consensus 144 ~wpiPItL~V~~e~a~~L--~~G~~vaL~d-~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~v 220 (416)
|||||||+|++|++++| ++|++|+|+| ++|+++|+|+|+|+|++||++||++||| +|++||||++++.+.|+|+|
T Consensus 79 -~~~Pi~l~v~~~~~~~l~~~~g~~v~L~~~~~g~~~a~l~v~e~~~~dk~~~~~~v~g-~~~~hP~v~~~~~~~g~~~v 156 (573)
T 1m8p_A 79 -FSMPITLDASQEVIDEKKLQAASRITLRDFRDDRNLAILTIDDIYRPDKTKEAKLVFG-GDPEHPAIVYLNNTVKEFYI 156 (573)
T ss_dssp -CCSCCCCEECHHHHHHTTCCTTCEEEEEETTTTEEEEEEEESCCCCCCHHHHHHHTSC-CCSSTHHHHHHHHTSCSEEC
T ss_pred -cceeEEEeCCHHHHHhhccCCCCEEEEEecCCCeEEEEEEeeeeecCCHHHHHHHHhC-CCCCCccHHHHHhccCCEEE
Confidence 89999999999999999 9999999998 8999999999999999999999999999 99999999999865599999
Q ss_pred EeeEEEecCCCCCCCcccCCCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCC
Q 014895 221 GGDLEVLKPIKYNDGLDHYRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGF 300 (416)
Q Consensus 221 gG~i~~l~~~~~~~~f~~~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~ 300 (416)
||+|+++++|.|+ +|++||+||+|+|+.|+++||++|||||||||+|||||+|++.| |.+. +++|||||++|+
T Consensus 157 ~G~~~~l~~~~~~-~~~~~~~tp~e~r~~~~~~gw~~v~afqtrnP~Hr~H~~l~~~a---~~~~---~~~llv~pl~g~ 229 (573)
T 1m8p_A 157 GGKIEAVNKLNHY-DYVALRYTPAELRVHFDKLGWSRVVAFQTRNPMHRAHRELTVRA---ARSR---QANVLIHPVVGL 229 (573)
T ss_dssp CEEEEECCCCCCC-SCGGGBCCHHHHHHHHHHTTCCSEEEECCSSCCCHHHHHHHHHH---HHHT---TCEEEECCBCCC
T ss_pred EEEEEEEecCCcc-CcHhhcCCHHHHHHHHHHcCCCeEEEEeeCCCcchhhHHHHHHH---HHhc---CCcEEEEeCCCC
Confidence 9999999988876 69999999999999999999999999999999999999998765 3354 389999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCC
Q 014895 301 TKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLY 380 (416)
Q Consensus 301 tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y 380 (416)
||+||+|+++|++||+++++ +| |+++++++++|++|||||||||+||||||||||||||||||||||||+++++.+||
T Consensus 230 ~k~~di~~~~R~~~~~~~~~-~~-p~~~v~l~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdhag~g~~~~~~~~Y 307 (573)
T 1m8p_A 230 TKPGDIDHFTRVRAYQALLP-RY-PNGMAVLGLLGLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGSNSKGEDFY 307 (573)
T ss_dssp CCTTCHHHHHHHHHHHHHGG-GS-STTSEEECBBCCCCCCCHHHHHHHHHHHHHHHTCSEEEECTTTTCCCCCTTCCCSS
T ss_pred CCCCCCCHHHHHHHHHHHHH-hC-CCCcEEEEecCchhhccCchHHHHHHHHHHHCCCCeEEECCCCCCCCCCCCCcccC
Confidence 99999999999999999996 44 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHhhcCCCceeEeeeeeeeeeeccCC
Q 014895 381 DPDHGKKVLSMALGLEKLNILPFRVGIIVHFNSS 414 (416)
Q Consensus 381 ~~~~aq~i~~~~~~~~~i~i~p~~~~~Y~~~~~~ 414 (416)
++|+||+||++++++.+|++++|..++||+.|.+
T Consensus 308 ~~~~a~~i~~~~~~~l~i~~v~fd~~~y~~~~g~ 341 (573)
T 1m8p_A 308 GPYDAQHAVEKYKDELGIEVVEFQMVTYLPDTDE 341 (573)
T ss_dssp CTTHHHHHHHHHHHHHCCEEEECCCCCBBTTTTB
T ss_pred CcchHHHHHHhhhhhcCceeEeccceEEEcCCCc
Confidence 9999999999997778999999999999999875
No 5
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=100.00 E-value=1.6e-104 Score=837.87 Aligned_cols=312 Identities=22% Similarity=0.299 Sum_probs=277.1
Q ss_pred CCCcCCCCccccccccCchhhhhHHHHhcCCCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCe
Q 014895 63 SSLIEPDGGVLVDLVVPESERGLRTTEAESMPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSI 142 (416)
Q Consensus 63 ~~~i~PhGg~Lv~l~v~~~~~~~l~~~a~~LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~ 142 (416)
++|+.||||+|++| |+++++++++++|++||+|+||++++||||||++|+||||+||||++||+||+ ++|||+||++
T Consensus 3 ~~~~~phgg~l~~~-~~~~~~~~~~~~a~~~~~~~l~~~~~~dlell~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~ 79 (552)
T 3cr8_A 3 NQLIEPYGGTLVNL-IDPEKREALKHEALSLPSLDLDWQQQCELEMLMTGAYSPLTGFMTRAQCARVE--SAQQLDDGSF 79 (552)
T ss_dssp CCCCCCGGGSCCCC-BCGGGHHHHHHHHHTSCEEECCHHHHHHHHHHHHTTTTTCCEECCHHHHHHHH--HHCBCTTCCB
T ss_pred CCCCCCCCCccccC-CChHHHHHHHHHhccCCeEecCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC
Confidence 46789999999999 99999999999999999999999999999999999999999999999999999 7999999987
Q ss_pred eccceeEEEecChHHHhhcCCCCeEEEeCCCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEEEe
Q 014895 143 VNMSLPIVLAIDDETKERIGSTTNVALLGPTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLVGG 222 (416)
Q Consensus 143 ~~wpiPItL~V~~e~a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG 222 (416)
|||||||+|++|++++|++|++|+|+|++|+++|+|+|+|+|++| |+|+|||
T Consensus 80 --~~~Pi~l~v~~~~~~~l~~g~~v~L~~~~g~~~a~l~v~e~~~~d--------------------------g~~~v~G 131 (552)
T 3cr8_A 80 --WPSPITLTSRDRALADRRPGERLALRDGEGYMLAILTLSDVWKDG--------------------------ERWHLAG 131 (552)
T ss_dssp --CCSCCCEEECCGGGTTCCTTCEEEEECTTSCEEEEEEEEEEEEET--------------------------TEEEEEE
T ss_pred --cceEEEEeCCHhHhhccCCCCEEEEECCCCcEEEEEEEEEEEeeC--------------------------CCEEEEE
Confidence 899999999999999999999999999999999999999999997 8999999
Q ss_pred eEEEecCCCCCCCcccCCCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCC
Q 014895 223 DLEVLKPIKYNDGLDHYRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTK 302 (416)
Q Consensus 223 ~i~~l~~~~~~~~f~~~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK 302 (416)
+|+++++|.|+ +|++||+||+|+|+.|+++||++|||||||||+|||||++++.| |+|.+ ++|||||++|+||
T Consensus 132 ~v~~~~~~~~~-~~~~~~~tp~e~r~~~~~~gw~~v~afqtrnp~Hrah~~~~~~~---~~~~~---~~lll~pl~g~~k 204 (552)
T 3cr8_A 132 EVEGAALPPHP-DFVSLRATPAELRALFVRRGWRRIIAWQARQPMHRAQYEFCLKS---AIENE---ANLLLHPQVGGDI 204 (552)
T ss_dssp EEEESCCCCCC-TTTTTBCCHHHHHHHHHHTTCCSEEEECCSSCCCHHHHHHHHHH---HHHTT---CEEEECCBCCCCT
T ss_pred EEEEEecCCcC-CchhhcCCHHHHHHHHHhcCCCceEEEecCCCCchHHHHHHHHH---HHhcC---CeEEEEeccCCCC
Confidence 99999988775 69999999999999999999999999999999999999998765 44665 8999999999999
Q ss_pred CCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCC
Q 014895 303 ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDP 382 (416)
Q Consensus 303 ~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y~~ 382 (416)
+||||+++||+||+++++ +| |+++++|+++|++|||||||||+||||||||||||||||||||||||+++++.+||++
T Consensus 205 ~~d~~~~~r~~~~~~~~~-~~-p~~~~~l~~~p~~m~~agprea~~ha~~r~n~G~th~ivGrdhag~g~~~~~~~~Y~~ 282 (552)
T 3cr8_A 205 TEAPAYFGLVRSFLAIRD-RF-PAATTQLSLLPAPPPEASGRALLLRAIVARNFGCSLLIAGGEHQPDGGDCRRGEDLTQ 282 (552)
T ss_dssp TTCTTHHHHHHHHHHHGG-GS-CGGGEEECBBCSCCCCSCSHHHHHHHHHHHHHTCSEEEC-------------------
T ss_pred CCCCCHHHHHHHHHHHHH-hC-CCccEEEeecchhhcccCcHHHHHHHHHHHhCCCCeeeeCCCCCCCCCCCCccccCCc
Confidence 999999999999999996 55 9999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHhhcCCCceeEeeeeeeeeeeccCC
Q 014895 383 DHGKKVLSMALGLEKLNILPFRVGIIVHFNSS 414 (416)
Q Consensus 383 ~~aq~i~~~~~~~~~i~i~p~~~~~Y~~~~~~ 414 (416)
|+||+||++++++.+|+++||..++||++|++
T Consensus 283 ~~a~~i~~~~~~~l~i~pv~f~~~~y~~~~g~ 314 (552)
T 3cr8_A 283 NRVDPSVAERAEKIGVRLIAYPRMVYVEDRAE 314 (552)
T ss_dssp ---CCSSHHHHHHHTCEEECCCCEEEEGGGTE
T ss_pred chHHHHHHhhhhhcCCeeeeccceEEecCCCe
Confidence 99999999998788999999999999999874
No 6
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=6.9e-104 Score=804.24 Aligned_cols=330 Identities=25% Similarity=0.362 Sum_probs=313.7
Q ss_pred CcCCCCcccccccc--CchhhhhHHHHhcCCCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCe
Q 014895 65 LIEPDGGVLVDLVV--PESERGLRTTEAESMPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSI 142 (416)
Q Consensus 65 ~i~PhGg~Lv~l~v--~~~~~~~l~~~a~~LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~ 142 (416)
++.||||+|++|++ +++++++++++|++||+|.||++++||||||++|+||||+||||++||+||+ ++|||+||++
T Consensus 1 ~~~phgg~l~~~~~~~~~~~~~~~~~~a~~lp~i~l~~~~~~dlell~~G~fsPL~GFM~~~d~~~v~--~~~rl~~G~~ 78 (396)
T 1jhd_A 1 MIKPVGSDELKPLFVYDPEEHHKLSHEAESLPSVVISSQAAGNAVMMGAGYFSPLQGFMNVADAMGAA--EKMTLSDGSF 78 (396)
T ss_dssp CCCCTTSSSCCCCBCCSHHHHHHHHHHHTTSCEEECCHHHHHHHHHHHTTTTTTCCEECCHHHHHHHH--HHSBCTTSCB
T ss_pred CCCCCCCeeeccccCCChHHHHHHHHHhccCCeEecCHHHHHHHHHHhcCCccCCcccCCHHHHHHHH--HhCcCCCCCC
Confidence 36799999999999 9999999999999999999999999999999999999999999999999999 7999999998
Q ss_pred eccceeEEEecChHHHhhcCCCCeEEEeCCCCCEEEEEEeccccccCHHHHHH------HhhCCCCCCCcchhhhcccCC
Q 014895 143 VNMSLPIVLAIDDETKERIGSTTNVALLGPTGDLIGILRSIEIYKHNKEERIA------RTWGTTAAGLPYVEEVITPAG 216 (416)
Q Consensus 143 ~~wpiPItL~V~~e~a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~Dk~~ea~------~VfGT~d~~HPgV~~~~~~~g 216 (416)
|||||||+|++ +++|++|++|+|+|++|+++|+|+|+|+|++||++||+ +||||+|++||||++++ ++|
T Consensus 79 --wpiPi~L~v~~--~~~l~~g~~v~L~d~~g~~~a~l~v~e~~~~dk~~~a~~~~~~~~v~gt~d~~HPgv~~~~-~~g 153 (396)
T 1jhd_A 79 --FPVPVLCLLEN--TDAIGDAKRIALRDPNVEGNPVLAVMDIEAIEEVSDEQMAVMTDKVYRTTDMDHIGVKTFN-SQG 153 (396)
T ss_dssp --CCSCCCCEESC--STTTTTCSEEEEECTTSTTCCEEEEEECCEEEECCHHHHHHHHHHHHSCCCTTSHHHHHHT-TSC
T ss_pred --ccEEEEEecch--hhhCCCCCEEEEECCCCceEEEEEeeeeeccChHHHhhhhcccccEECCCCCCCcchHHHh-hcC
Confidence 89999999997 88999999999999999999999999999999999999 99999999999999986 589
Q ss_pred cEEEEeeEEEecCCCCCCCcccCCCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEcc
Q 014895 217 NWLVGGDLEVLKPIKYNDGLDHYRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHP 296 (416)
Q Consensus 217 ~~~vgG~i~~l~~~~~~~~f~~~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~P 296 (416)
+|+|||+|++++++.|+++|++||+||+|+|+.|+++||++|||||||||+||||++|++.|++.+ + .+++||||
T Consensus 154 ~~~vgG~v~~l~~~~~~~~~~~~~~tP~e~R~~f~~~gw~~VvafqTrNPiHrgH~~l~~~Ale~~---~--~D~vll~P 228 (396)
T 1jhd_A 154 RVAVSGPIQVLNFSYFQADFPDTFRTAVEIRNEIKEHGWSKVVAFQTRNPMHRAHEELCRMAMESL---D--ADGVVVHM 228 (396)
T ss_dssp SEEEEEEEEECCCHHHHHHCTTTBCCHHHHHHHHHHHTCSSEEEEEESSCCCHHHHHHHHHHHHHH---T--CSEEEEEE
T ss_pred CEEEEEEEEEEecccccccchhhcCCHHHHHHHHHhcCCceEEEeccCCCCchHHHHHHHHHHHHc---C--CCeEEEEE
Confidence 999999999999887766899999999999999999999999999999999999999998776532 2 26899999
Q ss_pred ccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCC
Q 014895 297 LGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEK 376 (416)
Q Consensus 297 lvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~ 376 (416)
++|++|+||+|+++|++||+++++ +|||+++++++++|++||||||||++||||+|||||||||||||||||+|
T Consensus 229 ~~g~~K~~di~~~~R~~~~~~~~~-~~~p~~~v~l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~----- 302 (396)
T 1jhd_A 229 LLGKLKKGDIPAPVRDAAIRTMAE-VYFPPNTVMVTGYGFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVG----- 302 (396)
T ss_dssp EECCCCTTCCCHHHHHHHHHHHHH-HHSCTTCEEEEEEECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCT-----
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-hcCCCcceEEEechHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCcc-----
Confidence 999999999999999999999996 78999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHhh-cCC-CceeEeeeeeeeeeeccC
Q 014895 377 RDLYDPDHGKKVLSMA-LGL-EKLNILPFRVGIIVHFNS 413 (416)
Q Consensus 377 ~~~Y~~~~aq~i~~~~-~~~-~~i~i~p~~~~~Y~~~~~ 413 (416)
+||++|+||+||+++ +++ .+|++++|+.++||+.|+
T Consensus 303 -~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~ 340 (396)
T 1jhd_A 303 -DYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLN 340 (396)
T ss_dssp -TCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTT
T ss_pred -ccCCcchHHHHHHhcccccccceeEEecccceecCCCC
Confidence 799999999999998 445 689999999999999885
No 7
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=100.00 E-value=1e-102 Score=822.25 Aligned_cols=314 Identities=30% Similarity=0.503 Sum_probs=299.5
Q ss_pred HHhcCCCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCeeccceeEEEecChHHHhhcCCCCeE
Q 014895 88 TEAESMPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSIVNMSLPIVLAIDDETKERIGSTTNV 167 (416)
Q Consensus 88 ~~a~~LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~~~wpiPItL~V~~e~a~~L~~G~~v 167 (416)
++|++||+|.||+++++|||||++|+||||+||||++||+||+ ++|||+||++ |||||||+|++|++++|++|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~dl~~l~~G~~sPl~gfm~~~d~~~v~--~~~~l~~g~~--~~~Pi~l~v~~~~~~~l~~g~~v 77 (546)
T 2gks_A 2 EKIKYLKSIQISQRSVLDLELLAVGAFTPLDRFMGEEDYRNVV--ESMRLKSGTL--FPIPITLPMEKEIAKDLKEGEWI 77 (546)
T ss_dssp --CCSSEEEECCHHHHHHHHHHHTTTTTTCCSSCCHHHHHHHH--HHSBCTTSCB--CCSCCCEEECHHHHTTCCTTCEE
T ss_pred cccccCCeEecCHHHHHHHHHHhcCCcCCccccCCHHHHHHHH--HhCcCCCCCC--cceeEEEeCCHHHHhhcCCCCEE
Confidence 5789999999999999999999999999999999999999999 7999999987 89999999999999999999999
Q ss_pred EEeCCCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEEEeeEEEecCCCCCCCcccCCCCHHHHH
Q 014895 168 ALLGPTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLVGGDLEVLKPIKYNDGLDHYRLSPQQLR 247 (416)
Q Consensus 168 aL~d~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~i~~l~~~~~~~~f~~~r~tP~e~R 247 (416)
+|+|++|+++|+|+|+|+|++||++||++||||+|++||||++++. +|+|+|||+|++|++|.|+ +|++||+||+|+|
T Consensus 78 ~L~~~~g~~~a~l~v~e~~~~dk~~~~~~v~gt~~~~hp~v~~~~~-~g~~~~~G~~~~l~~~~~~-~~~~~~~tp~e~r 155 (546)
T 2gks_A 78 VLRDPKNVPLAIMRVEEVYKWNLEYEAKNVLGTTDPRHPLVAEMHT-WGEYYISGELKVIQLPKYY-DFPEYRKTPKQVR 155 (546)
T ss_dssp EEECTTCCEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHTT-SCSEEEECCEEESCCCCCC-SCGGGBCCHHHHH
T ss_pred EEECCCCeeEEEEEeceeecCCHHHHHHHHhCCCCCCCcchHHHhh-cCCEEEEEEEEEeecCCcC-CcHhhcCCHHHHH
Confidence 9999999999999999999999999999999999999999999875 6999999999999988876 6999999999999
Q ss_pred HHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCC
Q 014895 248 KEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPE 327 (416)
Q Consensus 248 ~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~ 327 (416)
+.|+++||++|||||||||+|||||+|++.|+ .+. +++|||||++|+||+||+|+++|++||+++++ +|||++
T Consensus 156 ~~~~~~gw~~v~afqtrnP~Hr~H~~l~~~a~---~~~---~~~llv~p~~g~~k~~di~~~~R~~~~~~~~~-~~~p~~ 228 (546)
T 2gks_A 156 EEIKSLGLDKIVAFQTRNPMHRVHEELTKRAM---EKV---GGGLLLHPVVGLTKPGDVDVYTRMRIYKVLYE-KYYDKK 228 (546)
T ss_dssp HHHHHHTCSCEEEECCSSCCCHHHHHHHHHHH---HHH---TSEEEECCBCSBCCTTSCCHHHHHHHHHHHHH-HHSCTT
T ss_pred HHHHHcCCCcEEEEecCCCCcHHHHHHHHHHH---Hhc---CCcEEEEeCcCCCCCCCCCHHHHHHHHHHHHH-hcCCCC
Confidence 99999999999999999999999999987654 344 38999999999999999999999999999996 799999
Q ss_pred ceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCCchHHHHHHhhcCCCceeEeeeeeee
Q 014895 328 TTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKKVLSMALGLEKLNILPFRVGI 407 (416)
Q Consensus 328 ~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y~~~~aq~i~~~~~~~~~i~i~p~~~~~ 407 (416)
+++++++|++|||||||||+||||||||||||||||||||||||+++++.+|||+|+||+||++++++.||++++|..++
T Consensus 229 ~v~~~~~p~~m~~agprea~~ha~ir~n~G~th~ivgrdhag~g~~~~~~~~Y~~~~a~~~~~~~~~~lgi~~v~fd~~~ 308 (546)
T 2gks_A 229 KTILAFLPLAMRMAGPREALWHGIIRRNYGATHFIVGRDHASPGKDSKGKPFYDPYEAQELFKKYEDEIGIKMVPFEELV 308 (546)
T ss_dssp TEEECBBCCBCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCCBCTTSCBSSCTTHHHHHHHHHHHHHTCEEEECCCCE
T ss_pred cEEEeecCchhhccCchHHHHHHHHHHhCCCCeEEECCCCCCCCCCCCCcccCCcchHHHHHHhcccccCceEEeccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999777899999999999
Q ss_pred eeeccCC
Q 014895 408 IVHFNSS 414 (416)
Q Consensus 408 Y~~~~~~ 414 (416)
||+.|.+
T Consensus 309 y~~~~g~ 315 (546)
T 2gks_A 309 YVPELDQ 315 (546)
T ss_dssp EETTTTE
T ss_pred EEcCCCe
Confidence 9999874
No 8
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=100.00 E-value=2.3e-97 Score=745.82 Aligned_cols=296 Identities=28% Similarity=0.468 Sum_probs=282.5
Q ss_pred cCCCceeeCccchHHHHHHHhcCcCCCCCCCChhhhhcccccCceecCCCCeeccceeEEEecChHHHhhcCCCCeEEEe
Q 014895 91 ESMPKVKLTKIDLEWVHVVSEGWASPLRGFMRENEYLQSLHFNCLRMKDGSIVNMSLPIVLAIDDETKERIGSTTNVALL 170 (416)
Q Consensus 91 ~~LP~i~L~~~~l~DlelL~~G~fSPL~GFM~~~dy~sVl~~~~mRL~dG~~~~wpiPItL~V~~e~a~~L~~G~~vaL~ 170 (416)
++||+|.||+++++|||||++|+||||+||||++||+||+ ++|||+||++ |||||||+|++| ++|++|++|+|
T Consensus 3 ~~lp~i~l~~~~~~dlell~~G~fsPL~GfM~~~d~~~v~--~~~rl~~G~~--wpiPi~L~v~~~--~~l~~g~~v~L- 75 (349)
T 1v47_A 3 ETLPALEIGEDERLDLENLATGAFFPVKGFMTREEALSVA--HEMRLPTGEV--WTIPILLQFREK--PRVGPGNTVAL- 75 (349)
T ss_dssp -CCCEEECCHHHHHHHHHHHTTTTTTCCSBCCHHHHHHHH--HHSBCTTSCB--CCSCCCEEESSC--CSCCTTCEEEE-
T ss_pred ccCceeecCHHHHHHHHHHhcCCccCccccCCHHHHHHHH--HhCcCCCCCC--cCeEEEecCChh--hcCCCCCEEEE-
Confidence 5699999999999999999999999999999999999999 7999999988 899999999988 78999999999
Q ss_pred CCCCCEEEEEEeccccccCHHHHHHHhhCCCCCCCcchhhhcccCCcEEEEeeEEEecCCCCCCCcccCCCCHHHHHHHH
Q 014895 171 GPTGDLIGILRSIEIYKHNKEERIARTWGTTAAGLPYVEEVITPAGNWLVGGDLEVLKPIKYNDGLDHYRLSPQQLRKEF 250 (416)
Q Consensus 171 d~eG~~vAiL~V~eiy~~Dk~~ea~~VfGT~d~~HPgV~~~~~~~g~~~vgG~i~~l~~~~~~~~f~~~r~tP~e~R~~f 250 (416)
|++|+++|+|+|+|+|++||++||++||||+|++||||++++ +.|+|+|||+|++++ + ++|++||+||+|+|+.|
T Consensus 76 ~~~g~~~a~l~v~e~~~~dk~~~~~~v~gt~d~~HPgv~~~~-~~g~~~vgG~v~~l~---~-~~f~~~~~tP~e~r~~f 150 (349)
T 1v47_A 76 LHGGERVALLHVAEAYELDLEALARAVFGTDSETHPGVARLY-GKGPYALAGRVEVLK---P-RPRTPLEKTPEEVRAFF 150 (349)
T ss_dssp EETTEEEEEEECCEEEECCHHHHHHHHHSCCCTTSHHHHHHH-HTCSEEEEBCEEESS---C-CCCCTTCCCHHHHHHHH
T ss_pred ccCCeeEEEEEeeeeeccCHHHHHHHHhCCCCcCCcchHHHh-hcCCEEEEEEEEEEE---c-CCchhhcCCHHHHHHHH
Confidence 799999999999999999999999999999999999999987 579999999999998 3 48999999999999999
Q ss_pred HhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceE
Q 014895 251 DNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTI 330 (416)
Q Consensus 251 ~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~ 330 (416)
+++||++|||||||||+||||++|++.|+ |.. +++||||++|++|+||+|+++|++||+++++ +|||+++++
T Consensus 151 ~~~gw~~VvafqTrNPiHrgH~~l~~~al----e~~---d~vll~P~~g~~K~~d~~~~~R~~~~~~~i~-~~~p~~~~~ 222 (349)
T 1v47_A 151 RQRGWRKVVAFQTRNAPHRAHEYLIRLGL----ELA---DGVLVHPILGAKKPDDFPTEVIVEAYQALIR-DFLPQERVA 222 (349)
T ss_dssp HHTTCCSEEEEEESSCCCHHHHHHHHHHH----HHS---SEEEEEEBCSCCCTTSCCHHHHHHHHHHHHH-HHSCGGGEE
T ss_pred HhcCCCeEEEeecCCCCchHHHHHHHHHH----HhC---CcEEEEECCCCCCCCCCCHHHHHHHHHHHHh-hcCCCcceE
Confidence 99999999999999999999999997654 333 8999999999999999999999999999996 789999999
Q ss_pred EEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCCCCCCCCCCCCCCchHHHHHHhhcCCCceeEeeeeeeeeee
Q 014895 331 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKKVLSMALGLEKLNILPFRVGIIVH 410 (416)
Q Consensus 331 l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGvG~~~~~~~~Y~~~~aq~i~~~~~~~~~i~i~p~~~~~Y~~ 410 (416)
++++|++||||||||++||||+|||||||||||||||||+| +||++|+||+||++++ +.+|++++|+.++||+
T Consensus 223 l~~~p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~------~~y~~~~aq~i~~~~~-~l~i~~v~~~~~~Y~~ 295 (349)
T 1v47_A 223 FFGLATPMRYAGPKEAVFHALVRKNFGATHFLVGRDHAGVG------DFYDPYAAHRIFDRLP-PLGIEIVKVGAVFHCP 295 (349)
T ss_dssp ECCBCSCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCST------TCSCTTHHHHGGGGSC-CCSSEEEECCCEEEET
T ss_pred EEechHHhhcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcc------cccCcccHHHHHHhhh-hcCceEEeccccEEcc
Confidence 99999999999999999999999999999999999999999 7999999999999998 7899999999999999
Q ss_pred ccC
Q 014895 411 FNS 413 (416)
Q Consensus 411 ~~~ 413 (416)
.|+
T Consensus 296 ~~~ 298 (349)
T 1v47_A 296 LCG 298 (349)
T ss_dssp TTT
T ss_pred cCC
Confidence 885
No 9
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=96.74 E-value=0.0086 Score=51.97 Aligned_cols=83 Identities=17% Similarity=0.176 Sum_probs=52.0
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCC--CCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCC
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKA--DDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHY 340 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~--dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mry 340 (416)
|.||+|+||..|++.|.+ .. +-+.+-|...+.|+ ..++.+.|++-.+..+. + + +.+.+.-+ .
T Consensus 8 sFdp~H~GH~~l~~~a~~----~~---d~v~v~~~~~p~k~~~~~~~~~~R~~ml~~a~~-~-~--~~v~v~~~--e--- 71 (160)
T 1od6_A 8 SFDPLTNGHLDVIQRASR----LF---EKVTVAVLENPSKRGQYLFSAEERLAIIREATA-H-L--ANVEAATF--S--- 71 (160)
T ss_dssp CCTTCCHHHHHHHHHHHH----HS---SEEEEEEECC-----CCSSCHHHHHHHHHHHTT-T-C--TTEEEEEE--C---
T ss_pred eeCCCCHHHHHHHHHHHH----HC---CEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc-C-C--CCEEEEec--C---
Confidence 899999999999876644 32 33344344334454 57899999998887664 2 2 23444333 2
Q ss_pred CChhHHHHHHHHHHhcCCcEEEecCCC
Q 014895 341 AGPTEVQWHAKARINAGANFYIVGRDP 367 (416)
Q Consensus 341 AGPREAllHAiiRkNyGcTHfIVGRDH 367 (416)
| -+.+ .+ +.+++.+||+|-|.
T Consensus 72 -~---~~~~-~l-~~l~~~~~v~G~d~ 92 (160)
T 1od6_A 72 -G---LLVD-FV-RRVGAQAIVKGLRA 92 (160)
T ss_dssp -S---CHHH-HH-HHTTCSEEEEEECT
T ss_pred -c---hHHH-HH-HHcCCCEEEEeCCc
Confidence 3 1222 33 77999999999883
No 10
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=96.26 E-value=0.052 Score=46.77 Aligned_cols=84 Identities=21% Similarity=0.166 Sum_probs=55.1
Q ss_pred ecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCC
Q 014895 262 QLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYA 341 (416)
Q Consensus 262 QTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryA 341 (416)
=|.||+|+||..|++.| .+.. +-+++-|...+.|....+.+.|++-.+..+. + + +.+.+.-+ .
T Consensus 8 GsFDpvH~GH~~l~~~a----~~~~---d~v~v~~~~~p~k~~~~~~~~R~~ml~~a~~-~-~--~~v~v~~~--~---- 70 (158)
T 1qjc_A 8 GTFDPITNGHIDIVTRA----TQMF---DHVILAIAASPSKKPMFTLEERVALAQQATA-H-L--GNVEVVGF--S---- 70 (158)
T ss_dssp ECCTTCCHHHHHHHHHH----HTTS---SEEEEEEESCCSSCCSSCHHHHHHHHHHHTT-T-C--TTEEEEEE--C----
T ss_pred ecCCCCCHHHHHHHHHH----HHhC---CEEEEEECCCCCCCCCCCHHHHHHHHHHHHh-c-C--CCeEEccc--c----
Confidence 38999999999998755 3443 3344445555556667899999998887664 2 3 23443332 2
Q ss_pred ChhHHHHHHHHHHhcCCcEEEecCCC
Q 014895 342 GPTEVQWHAKARINAGANFYIVGRDP 367 (416)
Q Consensus 342 GPREAllHAiiRkNyGcTHfIVGRDH 367 (416)
+- +-..+ +.+++.+||+|-|.
T Consensus 71 ~~----~~~~l-~~l~~~~~v~G~d~ 91 (158)
T 1qjc_A 71 DL----MANFA-RNQHATVLIRGLRA 91 (158)
T ss_dssp SC----HHHHH-HHTTCCEEEEECCT
T ss_pred hH----HHHHH-HHcCCCEEEEeccc
Confidence 21 22333 66799999999764
No 11
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=95.94 E-value=0.027 Score=51.63 Aligned_cols=97 Identities=13% Similarity=0.187 Sum_probs=63.1
Q ss_pred EEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccC-CCCC-CCCChHHHHHHHHHHHHcCcCCCCceEEEeCCC
Q 014895 259 FAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGG-FTKA-DDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPS 336 (416)
Q Consensus 259 vaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG-~tK~-dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~ 336 (416)
+..=|-||+|.||..+++.|.+.+ +. +.+++-|... ..|+ .-++.+.|++-.+..++ + . +. +.+.+.
T Consensus 7 i~~GsFdPiH~GH~~l~~~a~~~~---~~--d~v~~~~~~~~~~k~~~~~~~~~R~~ml~~a~~-~-~--~~--v~v~~~ 75 (213)
T 1k4m_A 7 LFGGTFDPVHYGHLKPVETLANLI---GL--TRVTIIPNNVPPHRPQPEANSVQRKHMLELAIA-D-K--PL--FTLDER 75 (213)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHH---TC--SCEEEEECSSCTTSCCCSSCHHHHHHHHHHHHT-T-C--TT--EEECCH
T ss_pred EEEeCcCCCCHHHHHHHHHHHHHc---CC--CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHhc-c-C--CC--EEEeHH
Confidence 334499999999999998775533 21 2233344432 2342 46899999999987774 2 2 22 335676
Q ss_pred CcCCCChh--HHHHHHHHHHhcCCc---EEEecCCC
Q 014895 337 PMHYAGPT--EVQWHAKARINAGAN---FYIVGRDP 367 (416)
Q Consensus 337 ~mryAGPR--EAllHAiiRkNyGcT---HfIVGRDH 367 (416)
....+||. .-.+.. +++.||++ .||+|-|.
T Consensus 76 e~~~~~~s~t~~~l~~-l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 76 ELKRNAPSYTAQTLKE-WRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp HHHCSSCCCHHHHHHH-HHHHHCTTSCEEEEEEHHH
T ss_pred HhcCCCCCcHHHHHHH-HHHHhCCCCcEEEEEehhh
Confidence 66666653 334443 77888998 89999874
No 12
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=95.88 E-value=0.069 Score=47.69 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=60.3
Q ss_pred EEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCC---CCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCC
Q 014895 259 FAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGF---TKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFP 335 (416)
Q Consensus 259 vaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~---tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP 335 (416)
+..=|.||+|+||..|++.| .+.. +-+.+-+..+. ++...++.+.|++-.+..+.+.-++.+.+. +.+
T Consensus 7 i~~G~Fdp~H~GH~~l~~~a----~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~--v~~ 77 (181)
T 1ej2_A 7 LLVGRMQPFHRGHLQVIKSI----LEEV---DELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYY--IIP 77 (181)
T ss_dssp EEEECCTTCCHHHHHHHHHH----TTTC---SEEEEEECSTTCCSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEE--EEE
T ss_pred EEEEEcCCcCHHHHHHHHHH----HHhC---CeeEEEECCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEE--EEe
Confidence 33348999999999998754 3332 33333221221 245578999999999887753212123333 445
Q ss_pred CCcCCCChhHHHHHHHHHH-hcCCcEEEecCCC
Q 014895 336 SPMHYAGPTEVQWHAKARI-NAGANFYIVGRDP 367 (416)
Q Consensus 336 ~~mryAGPREAllHAiiRk-NyGcTHfIVGRDH 367 (416)
.+..+. ...|+..+++ .++|+.+++|||.
T Consensus 78 ~d~~~~---~~~w~~~~~~l~~~~~~~v~gr~~ 107 (181)
T 1ej2_A 78 VQDIEC---NALWVGHIKMLTPPFDRVYSGNPL 107 (181)
T ss_dssp CCCCSC---HHHHHHHHHHHSCCCSEEECCCHH
T ss_pred cCccCC---HHHHHHHHHHHCCCCCEEEECCHH
Confidence 554443 4578886665 5689999999884
No 13
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=95.48 E-value=0.13 Score=45.11 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=55.8
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCC
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSP 337 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~ 337 (416)
++..=|-||+|+||..|++.|.+ .. +-+++-|..-+.|..-++.+.|++-.+..+. + + +.+.+ .+..
T Consensus 5 ~i~~GsFDpvH~GH~~li~~a~~----~~---d~v~v~~~~~p~k~~l~~~~~R~~ml~~a~~-~-~--~~v~v--~~~e 71 (169)
T 1o6b_A 5 AVCPGSFDPVTYGHLDIIKRGAH----IF---EQVYVCVLNNSSKKPLFSVEERCELLREVTK-D-I--PNITV--ETSQ 71 (169)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHH----HS---SEEEEEECCCCSSCCSSCHHHHHHHHHHHHT-T-C--TTEEE--EECS
T ss_pred EEEEEeeCCCCHHHHHHHHHHHH----hC---CEEEEEECCCCccCCCCCHHHHHHHHHHHHh-c-C--CCEEE--cccc
Confidence 34445999999999999876644 32 3334434433345567899999998887664 2 2 23333 3333
Q ss_pred cCCCChhHHHHHHHHHHhcCCcEEEecCCCC
Q 014895 338 MHYAGPTEVQWHAKARINAGANFYIVGRDPA 368 (416)
Q Consensus 338 mryAGPREAllHAiiRkNyGcTHfIVGRDHA 368 (416)
+- ... . -+.+++..||+|-|..
T Consensus 72 ----~~---~~~-~-l~~l~~~~~i~G~d~~ 93 (169)
T 1o6b_A 72 ----GL---LID-Y-ARRKNAKAILRGLRAV 93 (169)
T ss_dssp ----SC---HHH-H-HHHTTCSEEEEEECSG
T ss_pred ----hH---HHH-H-HHHcCCCEEEEcCccc
Confidence 11 222 2 2678999999998853
No 14
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=95.24 E-value=0.14 Score=46.00 Aligned_cols=100 Identities=20% Similarity=0.176 Sum_probs=58.0
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEcccc-CCCC--CCCCChHHHHHHHHHHHHcCcCCCCceEEEeC
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLG-GFTK--ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIF 334 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~Plv-G~tK--~dDip~~vR~r~y~~~l~~~y~p~~~~~l~il 334 (416)
++..=+-||+|+||..+++.|.+.+ + .+.+++-|.. -..| ..-.+.+.|++-.+..++ + + +. +.+.
T Consensus 10 ~v~~GsFdp~H~GH~~l~~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~a~~-~-~--~~--v~v~ 78 (194)
T 1kam_A 10 GIFGGTFDPPHNGHLLMANEVLYQA---G--LDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQ-S-N--PS--FKLE 78 (194)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHT---T--CSEEEEEECCCC---------CHHHHHHHHHHHHT-T-C--TT--EEEC
T ss_pred EEEEeccccccHHHHHHHHHHHHHh---C--CCEEEEEECCCCCCcCCcCCCCHHHHHHHHHHHHc-C-C--CC--eEEe
Confidence 3444599999999999988665432 1 1334443321 1223 356799999999887775 2 2 22 3356
Q ss_pred CCCcCCCChhHHH-HHHHHHHhcCCc--EEEecCCCC
Q 014895 335 PSPMHYAGPTEVQ-WHAKARINAGAN--FYIVGRDPA 368 (416)
Q Consensus 335 P~~mryAGPREAl-lHAiiRkNyGcT--HfIVGRDHA 368 (416)
+.....+||.=.+ .-.-+++.|.-+ .||+|-|..
T Consensus 79 ~~e~~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~ 115 (194)
T 1kam_A 79 LVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMI 115 (194)
T ss_dssp CGGGSTTCCCSHHHHHHHHHHHSTTSEEEEEEETTTT
T ss_pred HHHhcCCCCCChHHHHHHHHHHCCCCcEEEEEecchh
Confidence 7777777763211 222344555544 899999974
No 15
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=94.39 E-value=0.078 Score=52.78 Aligned_cols=131 Identities=16% Similarity=0.176 Sum_probs=78.7
Q ss_pred eEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEcc----ccCCCC--CCCCChHHHHHHHHHHHHcCcCCCCceE
Q 014895 257 AIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHP----LGGFTK--ADDVPLDVRMEQHSKVLEDGVLDPETTI 330 (416)
Q Consensus 257 ~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~P----lvG~tK--~dDip~~vR~r~y~~~l~~~y~p~~~~~ 330 (416)
.|++.=+-+++|+||.+|++.|.+.|.+.+....++-..| +....+ .--.+.+.|++-.+.+ + -+. +
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~---g---VD~-v 89 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF---G---IDG-V 89 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT---T---CSE-E
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc---C---CCE-E
Confidence 5777778999999999999988877766542222333333 222211 2245788888765541 2 233 3
Q ss_pred EEeCCCCcCCCCh-hHHHHHHHHHHhcCCcEEEecCCCC-CCCCCCCCCCCCCCchHHHHHHhhcCCCceeEeeeeee
Q 014895 331 VSIFPSPMHYAGP-TEVQWHAKARINAGANFYIVGRDPA-GMGHPTEKRDLYDPDHGKKVLSMALGLEKLNILPFRVG 406 (416)
Q Consensus 331 l~ilP~~mryAGP-REAllHAiiRkNyGcTHfIVGRDHA-GvG~~~~~~~~Y~~~~aq~i~~~~~~~~~i~i~p~~~~ 406 (416)
+ ++|....+|.- -|.....++.+.+++.+++||-|+. |-+ ..++. ..+.++... |++++..+..
T Consensus 90 ~-v~~F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~---------r~g~~-~~L~~~~~~-g~~V~~v~~~ 155 (338)
T 2x0k_A 90 L-VIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGEN---------AAGTA-DSLRQICQS-RLTVDVIDLL 155 (338)
T ss_dssp E-EECTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGG---------GCEEH-HHHHHHTTT-TSEEEEECCC
T ss_pred E-EccccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCC---------CCCCH-HHHHHHhcC-CeEEEEECcE
Confidence 3 56776666642 2445556677889999999999874 443 11223 233444334 6776665543
No 16
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=94.27 E-value=0.05 Score=48.37 Aligned_cols=96 Identities=20% Similarity=0.249 Sum_probs=58.2
Q ss_pred EEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccc-cCCCC--CCCCChHHHHHHHHHHHHcCcCCCCceEEEeCC
Q 014895 259 FAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPL-GGFTK--ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFP 335 (416)
Q Consensus 259 vaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~Pl-vG~tK--~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP 335 (416)
+..=|-||+|+||..|++.|.+.+ + .+.+++-|. .-..| ..-.+.+.|++-.+.+++ + . +. +.+.+
T Consensus 6 i~~GsFDPvH~GH~~li~~a~~~~---~--~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~~~~-~-~--~~--v~v~~ 74 (189)
T 2qtr_A 6 IIGGTFDPPHYGHLLIANEVYHAL---N--LEEVWFLPNQIPPHKQGRNITSVESRLQMLELATE-A-E--EH--FSICL 74 (189)
T ss_dssp EEEECCSSCCHHHHC-CHHHHHHT---T--CSEEEEEECSSCTTCTTSCCCCHHHHHHHHHHHHT-T-C--TT--EEECC
T ss_pred EEecCcccccHHHHHHHHHHHHHc---C--CCEEEEEECCCCCCccCCCCCCHHHHHHHHHHHhC-C-C--CC--EEEeh
Confidence 333489999999999988765432 2 133333333 12234 456899999998887774 2 2 22 33678
Q ss_pred CCcCCCChhHHHHHHHHHHhcCCcE------EEecCCCC
Q 014895 336 SPMHYAGPTEVQWHAKARINAGANF------YIVGRDPA 368 (416)
Q Consensus 336 ~~mryAGPREAllHAiiRkNyGcTH------fIVGRDHA 368 (416)
.....+||.=.+ . .+ +.+++.+ ||+|-|..
T Consensus 75 ~e~~~~~~~~~~-~-~l-~~l~~~~p~~~~~~v~G~D~~ 110 (189)
T 2qtr_A 75 EELSRKGPSYTY-D-TM-LQLTKKYPDVQFHFIIGGDMV 110 (189)
T ss_dssp TGGGSCSCCCHH-H-HH-HHHHHHCTTCEEEEEEEHHHH
T ss_pred HHhcCCCCCCHH-H-HH-HHHHHHCCCCCEEEEEehhhh
Confidence 888888875221 2 11 4455555 89998853
No 17
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=93.71 E-value=0.29 Score=43.07 Aligned_cols=89 Identities=16% Similarity=0.167 Sum_probs=54.1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEc-cccC--CCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcC
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLH-PLGG--FTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMH 339 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~-PlvG--~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mr 339 (416)
|.||+|.||..|++.| .+.. +-+.+- |..- .+|...++.+.|++-.+..+++ +| .++. +++.+..
T Consensus 8 sFdp~H~GH~~l~~~a----~~~~---d~v~v~v~~~~~p~~~~~~~~~~~R~~m~~~~~~~--~~-~~v~--v~~~d~l 75 (168)
T 1f9a_A 8 RFQPFHKGHLEVIKKI----AEEV---DEIIIGIGSAQKSHTLENPFTAGERILMITQSLKD--YD-LTYY--PIPIKDI 75 (168)
T ss_dssp CCTTCCHHHHHHHHHH----TTTC---SEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTT--SS-CEEE--EEECCCC
T ss_pred ecCCcCHHHHHHHHHH----HHhC---CeEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHhc--CC-CceE--EEeeCCc
Confidence 8999999999998754 3332 333332 2221 1244568999999999988863 33 2232 2333333
Q ss_pred CCChhHHHHHHHHH-HhcCCcEEEecCC
Q 014895 340 YAGPTEVQWHAKAR-INAGANFYIVGRD 366 (416)
Q Consensus 340 yAGPREAllHAiiR-kNyGcTHfIVGRD 366 (416)
+. +..|+..++ ..+.|+.+++||+
T Consensus 76 ~~---~~~w~~~~~~~~~~~~~~~~~~~ 100 (168)
T 1f9a_A 76 EF---NSIWVSYVESLTPPFDIVYSGNP 100 (168)
T ss_dssp SC---GGGHHHHHHHHSCCCSEEECCCH
T ss_pred cc---HHHHHHHHHHhccCCCEEEECcH
Confidence 32 347887554 4557887777765
No 18
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=93.51 E-value=0.29 Score=43.95 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=51.1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCC
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAG 342 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAG 342 (416)
|-||+|.||..+++.| .+.. +-+++-|..-+.|..-++.+.|++-.+..++ .+| .+.+..+. |
T Consensus 11 sFDPiH~GHl~i~~~a----~~~~---d~viv~v~~~p~K~~~~~~~~R~~ml~~a~~--~~~--~v~v~~~e------~ 73 (168)
T 3f3m_A 11 SFDPITYGHLDIIERS----TDRF---DEIHVCVLKNSKKEGTFSLEERMDLIEQSVK--HLP--NVKVHQFS------G 73 (168)
T ss_dssp CCTTCCHHHHHHHHHH----GGGS---SEEEEEECC-----CCSCHHHHHHHHHHHTT--TCT--TEEEEECC------S
T ss_pred EcCcCCHHHHHHHHHH----HHhC---CEEEEEEcCCCCCCCCCCHHHHHHhHHHHhc--CCC--CEEEEEcC------C
Confidence 8999999999998654 4443 4444445544456778999999999988775 232 33333333 4
Q ss_pred hhHHHHHHHHHHhcCCcEEEecCC
Q 014895 343 PTEVQWHAKARINAGANFYIVGRD 366 (416)
Q Consensus 343 PREAllHAiiRkNyGcTHfIVGRD 366 (416)
-. .. ..+.++++.||.|-|
T Consensus 74 ~t---vd--~~~~l~~~~~I~G~d 92 (168)
T 3f3m_A 74 LL---VD--YCEQVGAKTIIRGLR 92 (168)
T ss_dssp CH---HH--HHHHHTCCEEEEEEC
T ss_pred CH---HH--HHHHcCCCEEEEcCC
Confidence 11 11 124579999999976
No 19
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=93.26 E-value=0.48 Score=39.68 Aligned_cols=88 Identities=17% Similarity=0.238 Sum_probs=50.1
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEcccc-----CCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEE
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLG-----GFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVS 332 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~Plv-----G~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ 332 (416)
++..=+-||+|+||..|++.|. +.+ +-+.+-+.. -..|..-.+.+.|++-.++ + +.. +.+++.
T Consensus 4 ~~~~G~FDp~H~GH~~li~~a~----~~~---~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~-~--~~~--d~v~~~ 71 (132)
T 2b7l_A 4 VITYGTYDLLHYGHIELLRRAR----EMG---DYLIVALSTDEFNQIKHKKSYYDYEQRKMMLES-I--RYV--DLVIPE 71 (132)
T ss_dssp EEEEECCCSCCHHHHHHHHHHH----HTS---SEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHT-B--TTC--CEEEEE
T ss_pred EEEeeecCcCCHHHHHHHHHHH----HhC---CcEEEEEECCHHHhccCCCCCCCHHHHHHHHHh-c--CCC--CEEEEC
Confidence 3433489999999999987653 443 222221111 0123345789999987663 2 122 333331
Q ss_pred eCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCC
Q 014895 333 IFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPA 368 (416)
Q Consensus 333 ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHA 368 (416)
+ .|.+-+ .. + +.++|+++|+|.|..
T Consensus 72 -----~---~~~~~~-~~-~-~~~~~~~iv~G~D~~ 96 (132)
T 2b7l_A 72 -----K---GWGQKE-DD-V-EKFDVDVFVMGHDWE 96 (132)
T ss_dssp -----C---CGGGHH-HH-H-HHTTCCEEEECGGGT
T ss_pred -----C---ChHHHH-HH-H-HHcCCCEEEECCCCc
Confidence 1 122222 22 3 568999999999984
No 20
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=92.98 E-value=0.57 Score=41.71 Aligned_cols=80 Identities=21% Similarity=0.201 Sum_probs=52.0
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCCC
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYAG 342 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryAG 342 (416)
|-||+|.||.++++.| .+.. +-+++-|.....|..-++.+.|++-.+..++ .+| .+.+..+. |
T Consensus 20 sFdP~H~GHl~l~~~A----~~~~---D~viv~v~~~~~kk~~~~~~~R~~ml~~a~~--~~~--~v~v~~~e------~ 82 (173)
T 1vlh_A 20 SFDPITLGHVDIIKRA----LSIF---DELVVLVTENPRKKCMFTLEERKKLIEEVLS--DLD--GVKVDVHH------G 82 (173)
T ss_dssp CCTTCCHHHHHHHHHH----HTTC---SEEEEEEECCTTCCCSSCHHHHHHHHHHHTT--TCT--TEEEEEEC------S
T ss_pred EECcCcHHHHHHHHHH----HHHC---CEEEEEEeCCCCCCCCCCHHHHHHHHHHHhc--CCC--CEEEecCc------c
Confidence 8999999999998654 4554 5555556655556678999999999987665 233 34443333 3
Q ss_pred hhHHHHHHHHHHhcCCcEEEec
Q 014895 343 PTEVQWHAKARINAGANFYIVG 364 (416)
Q Consensus 343 PREAllHAiiRkNyGcTHfIVG 364 (416)
.. .-.-+.+++..||-|
T Consensus 83 ~t-----vd~l~~l~~~~~i~g 99 (173)
T 1vlh_A 83 LL-----VDYLKKHGIKVLVRG 99 (173)
T ss_dssp CH-----HHHHHHHTCCEEEEE
T ss_pred hH-----HHHHHHhCCCeEEeC
Confidence 11 112245688888844
No 21
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=92.87 E-value=0.35 Score=48.64 Aligned_cols=95 Identities=23% Similarity=0.265 Sum_probs=59.5
Q ss_pred CeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEE-ccc--cCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEE
Q 014895 256 DAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLL-HPL--GGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVS 332 (416)
Q Consensus 256 ~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl-~Pl--vG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ 332 (416)
+.|++.=.-||+|+||.++++.+.+ .+ ....++ .+. +....+--++.+.|.+-.+.. | -| .++
T Consensus 53 ~~v~~lG~FDg~H~GHq~lI~~a~~----~~--~~~~Vms~~~~~vqrg~~~l~~~~~R~~~~~~~---G---vD-~vi- 118 (357)
T 3gmi_A 53 KIVCDFTEYNPLHKGHKYALEKGKE----HG--IFISVLPGPLERSGRGIPYFLNRYIRAEMAIRA---G---AD-IVV- 118 (357)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHHT----SS--EEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHH---T---CS-EEE-
T ss_pred CEEEEEEecCccCHHHHHHHHHHHH----cC--CeEEEEcCchHHhcCCCCcCCCHHHHHHHHHHC---C---CC-EEE-
Confidence 5788888999999999999986543 21 112222 233 443345567778888765532 2 23 334
Q ss_pred eCCCCcCCCChhHHHHHH-HHHHhcCCcEEEecC
Q 014895 333 IFPSPMHYAGPTEVQWHA-KARINAGANFYIVGR 365 (416)
Q Consensus 333 ilP~~mryAGPREAllHA-iiRkNyGcTHfIVGR 365 (416)
.+|..+. -.|.|-+-.| .+-+.+||.+++||-
T Consensus 119 elpF~~~-~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 119 EGPPMGI-MGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp ECCCGGG-SCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EcCchhh-CCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 6787533 5666643332 233589999999998
No 22
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=92.69 E-value=0.4 Score=43.14 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=49.7
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEE-EeCCCCcCCC
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIV-SIFPSPMHYA 341 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l-~ilP~~mryA 341 (416)
|-||+|.||..+++.| .+.. +-+++-|..-+.|..-++.+.|++-.+..++ .+ + .+.+ ..+.
T Consensus 10 sFDPiH~GHl~i~~~a----~~~~---D~viv~v~~~~~K~~~~~~~~R~~ml~~a~~--~~-~-~v~v~~~~e------ 72 (171)
T 3nd5_A 10 SFDPMTNGHLNLIERS----AKLF---DEVIIGVFINTSKQTLFTPEEKKYLIEEATK--EM-P-NVRVIMQET------ 72 (171)
T ss_dssp CCTTCCHHHHHHHHHH----HTTC---SEEEEEEEC------CCCHHHHHHHHHHHHT--TC-T-TEEEEEECS------
T ss_pred EccccCHHHHHHHHHH----HHHC---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHc--cC-C-CEEEeeCCC------
Confidence 8999999999998654 4443 4444445544567778999999999998775 23 2 3433 4443
Q ss_pred ChhHHHHHHHHHHhcCCcEEEecCC
Q 014895 342 GPTEVQWHAKARINAGANFYIVGRD 366 (416)
Q Consensus 342 GPREAllHAiiRkNyGcTHfIVGRD 366 (416)
|- ... . .+.++++.||.|-|
T Consensus 73 ~~---tvd-~-~~~l~~~~~i~G~~ 92 (171)
T 3nd5_A 73 QL---TVE-S-AKSLGANFLIRGIR 92 (171)
T ss_dssp SC---HHH-H-HHHHTCCEEEEEEC
T ss_pred Cc---HHH-H-HHHCCCCEEEECCC
Confidence 21 111 1 24458889999944
No 23
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=92.54 E-value=0.75 Score=41.98 Aligned_cols=89 Identities=17% Similarity=0.099 Sum_probs=56.0
Q ss_pred CeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCC
Q 014895 256 DAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFP 335 (416)
Q Consensus 256 ~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP 335 (416)
+.++..=+-||+|+||..+++.|.+ .. +-+.+-+..-+.|..-++.+-|++-.+.+++ + + +.+.+..+.
T Consensus 23 ki~v~~GsFDpiH~GHl~li~~A~~----~~---d~viv~v~~~p~K~~l~s~eeR~~ml~~~~~-~-v--~~v~v~~f~ 91 (187)
T 3k9w_A 23 VVAVYPGTFDPLTRGHEDLVRRASS----IF---DTLVVGVADSRAKKPFFSLEERLKIANEVLG-H-Y--PNVKVMGFT 91 (187)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHH----HS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT-T-C--TTEEEEEES
T ss_pred EEEEEEEeCCcCcHHHHHHHHHHHH----HC---CcEEEEEecCCccCCCCCHHHHHHHHHHHhc-c-C--CcEEEEech
Confidence 3455555999999999999876543 32 3233323333446667899999999998774 2 3 334333332
Q ss_pred CCcCCCChhHHHHHHHHHHhcCCcEEEecCC
Q 014895 336 SPMHYAGPTEVQWHAKARINAGANFYIVGRD 366 (416)
Q Consensus 336 ~~mryAGPREAllHAiiRkNyGcTHfIVGRD 366 (416)
|- +. -. .+.+|+..+|+|-|
T Consensus 92 ------~~---~~-d~-l~~l~~~~iv~G~r 111 (187)
T 3k9w_A 92 ------GL---LK-DF-VRANDARVIVRGLR 111 (187)
T ss_dssp ------SC---HH-HH-HHHTTCSEEEEECC
T ss_pred ------hh---HH-HH-HHHcCCCEEEECCC
Confidence 21 11 12 34689999999855
No 24
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=92.38 E-value=0.36 Score=43.05 Aligned_cols=85 Identities=21% Similarity=0.212 Sum_probs=51.4
Q ss_pred EEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCc
Q 014895 259 FAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPM 338 (416)
Q Consensus 259 vaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~m 338 (416)
+..=|-||+|.||..++++| .+.+ +-+++-|..-+.|..-++.+.|++-.+.++. . +.+.+..+
T Consensus 9 i~~GsFDPiH~GHl~li~~A----~~~~---d~viv~v~~~~~K~~~~~~~~R~~m~~~~~~-~----~~v~V~~~---- 72 (162)
T 4f3r_A 9 IYPGTFDPLTNGHVDIIERA----LPLF---NKIIVACAPTSRKDPHLKLEERVNLIADVLT-D----ERVEVLPL---- 72 (162)
T ss_dssp EEEECCTTCCHHHHHHHHHH----GGGC---SEEEEEECCC------CCHHHHHHHHHHHCC-C----TTEEEEEC----
T ss_pred EEEEEcCCCCHHHHHHHHHH----HHHC---CcEEEEEecCCccCCCCCHHHHHHHHHHhhC-C----CCEEEEec----
Confidence 33348999999999998654 4554 4455544444556667899999999887764 1 33444343
Q ss_pred CCCChhHHHHHHHHHHhcCCcEEEecCC
Q 014895 339 HYAGPTEVQWHAKARINAGANFYIVGRD 366 (416)
Q Consensus 339 ryAGPREAllHAiiRkNyGcTHfIVGRD 366 (416)
.| +.--.+ +.+|++.||.|-|
T Consensus 73 --~~----l~~~~~-~~~~~~~~v~G~r 93 (162)
T 4f3r_A 73 --TG----LLVDFA-KTHQANFILRGLR 93 (162)
T ss_dssp --CS----CHHHHH-HHTTCCEEEEEEC
T ss_pred --cc----hHHHHH-HHcCCCEEEECCC
Confidence 23 111233 4579999999955
No 25
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=91.93 E-value=0.45 Score=45.86 Aligned_cols=93 Identities=17% Similarity=0.238 Sum_probs=57.2
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccC---CCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcC
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGG---FTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMH 339 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG---~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mr 339 (416)
|-||+|.||..|++.|. +.. +-+++-+... .+|..-++.+.|++-.+..+++.-+|..++.+..++ .+.
T Consensus 15 tFdP~h~GHl~~~~~a~----~~~---d~~~~~v~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~-d~~ 86 (352)
T 2qjt_B 15 RFQPFHKGHLHNIIIAL----QNS---KKVIINIGSCFNTPNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLA-DYF 86 (352)
T ss_dssp CCTTCCHHHHHHHHHHH----HSE---EEEEEEEEEESCCCCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEE-CCT
T ss_pred ecCCCChHHHHHHHHHH----HhC---CcEEEEECCCCCCcccCCCCCHHHHHHHHHHHhccccCccceEEEEEcC-CCc
Confidence 89999999999987553 332 3333323322 245566899999999998886444554555553433 222
Q ss_pred CCChhHHHHHHHHHHh------cCCcEEEecCC
Q 014895 340 YAGPTEVQWHAKARIN------AGANFYIVGRD 366 (416)
Q Consensus 340 yAGPREAllHAiiRkN------yGcTHfIVGRD 366 (416)
+. ..+|...+++. +.+...++|+.
T Consensus 87 ~~---~~~~~~~~~~~~~~~~~~~~~~~~ig~~ 116 (352)
T 2qjt_B 87 YQ---EQKWQDELRKNVYKHAKNNNSIAIVGHI 116 (352)
T ss_dssp TC---HHHHHHHHHHHHTTTSCSSCCEEECCBS
T ss_pred CC---hHHHHHHHHHHHHHhcccCCeEEEEcCC
Confidence 22 24666655543 33577788865
No 26
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=89.85 E-value=3 Score=37.83 Aligned_cols=85 Identities=15% Similarity=0.077 Sum_probs=55.4
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCC
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSP 337 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~ 337 (416)
.+..=|-||+|.||..++++|. +.. +-+++-|..-..|..-++.+.|++-.+..++ .+| ++.+..+
T Consensus 24 ~i~~GsFDPiH~GHl~ii~~A~----~~~---D~Viv~v~~np~K~~~~s~eeR~~mv~~a~~--~~~--~v~V~~~--- 89 (177)
T 3nbk_A 24 AVCPGSFDPVTLGHVDIFERAA----AQF---DEVVVAILVNPAKTGMFDLDERIAMVKESTT--HLP--NLRVQVG--- 89 (177)
T ss_dssp EEEEECCTTCCHHHHHHHHHHH----HHS---SEEEEEECCCTTSCCSSCHHHHHHHHHHHCT--TCT--TEEEEEC---
T ss_pred EEEEEeeCCCCHHHHHHHHHHH----HHC---CEEEEEEcCCCCCCCCCCHHHHHHHHHHHhC--CCC--CEEEEec---
Confidence 3333499999999999987654 333 4455556655567788999999999887775 232 3434332
Q ss_pred cCCCChhHHHHHHHHHHhcCCcEEEec
Q 014895 338 MHYAGPTEVQWHAKARINAGANFYIVG 364 (416)
Q Consensus 338 mryAGPREAllHAiiRkNyGcTHfIVG 364 (416)
.|- +.+ ..+.+|++.+|-|
T Consensus 90 ---e~l---~vd--~~~~~~a~~ivrG 108 (177)
T 3nbk_A 90 ---HGL---VVD--FVRSCGMTAIVKG 108 (177)
T ss_dssp ---CSC---HHH--HHHHTTCCEEEEE
T ss_pred ---Cch---HHH--HHHHcCCCEEEEC
Confidence 231 222 3355899988865
No 27
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=89.69 E-value=2 Score=40.28 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=57.1
Q ss_pred ecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCC-CC-CCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcC
Q 014895 262 QLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGF-TK-ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMH 339 (416)
Q Consensus 262 QTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~-tK-~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mr 339 (416)
=|-||+|.||..|++.|.+.+ + .+.+++-|.... .| ..-++.+.|++-.+..++ + . +.+. +.+....
T Consensus 30 GsFdPiH~GHl~li~~a~~~~---~--ld~v~v~~~~~~p~K~~~~~~~~~R~~ml~~a~~-~-~--~~v~--v~~~e~~ 98 (242)
T 1yum_A 30 GTFDPVHIGHMRSAVEMAEQF---A--LDELRLLPNARPPHRETPQVSAAQRLAMVERAVA-G-V--ERLT--VDPRELQ 98 (242)
T ss_dssp ECCTTCCHHHHHHHHHHHHHH---T--CSEEEEEECCCCGGGSCTTCCHHHHHHHHHHHHT-T-C--TTEE--ECCGGGG
T ss_pred eeCcHhhHHHHHHHHHHHHHc---C--CCEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHhc-C-C--CeEE--Eeeeeec
Confidence 389999999999998765432 1 134555344332 34 356899999999887664 2 2 2233 4565555
Q ss_pred CCChhHHHH-HHHHHHhcCCc---EEEecCC
Q 014895 340 YAGPTEVQW-HAKARINAGAN---FYIVGRD 366 (416)
Q Consensus 340 yAGPREAll-HAiiRkNyGcT---HfIVGRD 366 (416)
-.||.-.+= =..+++.||.+ .||+|-|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 556532221 12356677666 5777764
No 28
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=89.53 E-value=0.99 Score=43.96 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=57.5
Q ss_pred EEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEcc---ccCCC-CCCCCChHHHHHHHHHHHHcCcCCCCceEEEeC
Q 014895 259 FAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHP---LGGFT-KADDVPLDVRMEQHSKVLEDGVLDPETTIVSIF 334 (416)
Q Consensus 259 vaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~P---lvG~t-K~dDip~~vR~r~y~~~l~~~y~p~~~~~l~il 334 (416)
++.=+-+.+|+||..|++.|.+.|.+.+....++-..| +.... ..--.+.+.|++-.+. +- .++ ++
T Consensus 3 vtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~------lg---~~~-v~ 72 (293)
T 1mrz_A 3 VSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSR------YA---RTV-VL 72 (293)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTT------TS---CEE-EE
T ss_pred EEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHh------CC---CEE-EE
Confidence 33348899999999999988877766553322333343 22211 1225678888874432 21 223 55
Q ss_pred CCCcCCC--ChhHHHHHHHHHHhcCCcEEEecCCCC
Q 014895 335 PSPMHYA--GPTEVQWHAKARINAGANFYIVGRDPA 368 (416)
Q Consensus 335 P~~mryA--GPREAllHAiiRkNyGcTHfIVGRDHA 368 (416)
|. ..+| .| |.....++ +++.+++||-|+.
T Consensus 73 ~F-~~~a~ls~-~~Fi~~il---l~~~~iVvG~Df~ 103 (293)
T 1mrz_A 73 DF-FRIKDLTP-EGFVERYL---SGVSAVVVGRDFR 103 (293)
T ss_dssp CH-HHHTTCCH-HHHHHHHC---TTCCEEEEETTCC
T ss_pred Eh-HHhhcCCH-HHHHHHHh---cCCCEEEECCCCC
Confidence 64 3333 34 44555555 9999999999974
No 29
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=89.04 E-value=1.3 Score=36.71 Aligned_cols=88 Identities=14% Similarity=0.197 Sum_probs=49.1
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccC-----CCCCCCCChHHHHHHHHHHHHcCcCCCCceEEE
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGG-----FTKADDVPLDVRMEQHSKVLEDGVLDPETTIVS 332 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG-----~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ 332 (416)
++..=+-||+|+||..+++.| .+.+ +-+.+-+... ..+..-.+.+.|++-.++ + +.. +.++.
T Consensus 4 ~~~~G~FDp~H~GH~~li~~a----~~~~---d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~-~--~~~--d~v~~- 70 (129)
T 1coz_A 4 VITYGTFDLLHWGHIKLLERA----KQLG---DYLVVAISTDEFNLQKQKKAYHSYEHRKLILET-I--RYV--DEVIP- 70 (129)
T ss_dssp EEEEECCCSCCHHHHHHHHHH----HTTS---SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTT-B--TTC--CEEEE-
T ss_pred EEEEEeCCCCCHHHHHHHHHH----HHhC---CCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHh-c--CCC--CEEEe-
Confidence 333348999999999998755 3443 2222212110 123457888999886653 2 122 33332
Q ss_pred eCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCC
Q 014895 333 IFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPA 368 (416)
Q Consensus 333 ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHA 368 (416)
. + .+.+-+ .. + +.+++.++++|-|..
T Consensus 71 ~----~---~~~~~~-~~-l-~~~~~~~iv~G~D~~ 96 (129)
T 1coz_A 71 E----K---NWEQKK-QD-I-IDHNIDVFVMGDDWE 96 (129)
T ss_dssp E----C---CSTTHH-HH-H-HHTTCSEEEEEGGGT
T ss_pred C----C---CHHHHH-HH-H-HHhCCcEEEECCCCC
Confidence 1 1 122222 22 4 457999999999873
No 30
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=88.73 E-value=0.33 Score=41.78 Aligned_cols=90 Identities=14% Similarity=0.219 Sum_probs=51.7
Q ss_pred CeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEc--cccC-CCCCCCCChHHHHHHHHHHHHcCcCCCCceEEE
Q 014895 256 DAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLH--PLGG-FTKADDVPLDVRMEQHSKVLEDGVLDPETTIVS 332 (416)
Q Consensus 256 ~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~--PlvG-~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ 332 (416)
+.+++.=+-||+|+||..|++.| .+.+.. ..+.+. |.+- ..+.--.+.+.|++..+.+ +++ +.+++
T Consensus 3 ~~v~~~G~FD~vH~GH~~li~~a----~~~~~~-~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~---~~v--d~v~~- 71 (143)
T 3glv_A 3 IRVMATGVFDILHLGHIHYLKES----KKLGDE-LVVVVARDSTARNNGKIPIFDENSRLALISEL---KVV--DRAIL- 71 (143)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHH----HTTSSE-EEEEECCHHHHHHTTCCCSSCHHHHHHHHTTB---TTC--SEEEE-
T ss_pred eEEEEEeecCCCCHHHHHHHHHH----HHhCCC-cEEEEECCcchhhcCCCCCCCHHHHHHHHHhc---CCC--CEEEE-
Confidence 45666669999999999998754 344311 111121 1110 1234457889998855431 122 44433
Q ss_pred eCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCC
Q 014895 333 IFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDP 367 (416)
Q Consensus 333 ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDH 367 (416)
. .|.+-+ . ++ +.+|+.++++|-|+
T Consensus 72 -~-------~~~~f~-~-~~-~~l~~~~iv~G~d~ 95 (143)
T 3glv_A 72 -G-------HEGDMM-K-TV-IEVKPDIITLGYDQ 95 (143)
T ss_dssp -C-------CTTCHH-H-HH-HHHCCSEEEECTTC
T ss_pred -c-------CchhHH-H-HH-HhcCCCEEEECCCC
Confidence 1 233322 3 33 57999999999885
No 31
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=88.57 E-value=1.2 Score=39.40 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=54.3
Q ss_pred ecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcCCC
Q 014895 262 QLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMHYA 341 (416)
Q Consensus 262 QTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mryA 341 (416)
=|-||+|.||..++++| .+.+ +-+.+-+.....|..-++.+.|++..+..++ .. +++.+..+ .
T Consensus 9 GsFDPiH~GHl~ii~~A----~~~~---D~viv~v~~~~~K~~~~~~~eR~~ml~~a~~--~~--~~v~v~~~------~ 71 (157)
T 3nv7_A 9 GTFDPVTNGHIDIIHRS----SELF---EKLIVAVAHSSAKNPMFSLDERLKMIQLATK--SF--KNVECVAF------E 71 (157)
T ss_dssp ECCTTCCHHHHHHHHHH----HTTS---SEEEEEEECCGGGCCSSCHHHHHHHHHHHHT--TS--TTEEEEEE------C
T ss_pred EEcCCCCHHHHHHHHHH----HHhC---CceEEEEccCCCCCCCCCHHHHHHHHHHHhc--CC--CcEEEEec------C
Confidence 38999999999998754 4554 4444434444456678999999999998775 23 33433232 2
Q ss_pred ChhHHHHHHHHHHhcCCcEEEecCC
Q 014895 342 GPTEVQWHAKARINAGANFYIVGRD 366 (416)
Q Consensus 342 GPREAllHAiiRkNyGcTHfIVGRD 366 (416)
| ++-. ..+.+|++-+|-|=.
T Consensus 72 ~----l~~~-~~~~~~~~~ivrG~r 91 (157)
T 3nv7_A 72 G----LLAY-LAKEYHCKVLVRGLR 91 (157)
T ss_dssp S----CHHH-HHHHTTCCCBCCCCS
T ss_pred c----hHHH-HHHHcCCCEEEECCc
Confidence 3 3323 345679998888843
No 32
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=86.68 E-value=0.48 Score=45.25 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=49.6
Q ss_pred eecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccC--CCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCc
Q 014895 261 FQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGG--FTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPM 338 (416)
Q Consensus 261 FQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG--~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~m 338 (416)
.=|-||+|.||..|++.|.+.+- ...+++ |... .+|..-++.+.|++-.+..+.+ ++.+++.+-.+. ..
T Consensus 13 ~G~FdP~H~GH~~li~~a~~~~d-----~v~v~v-~~~~~p~~~~~~~~~~~R~~m~~~~~~~--~~~~~~~~i~~~-d~ 83 (341)
T 2qjo_A 13 IGRFQPFHLGHLRTLNLALEKAE-----QVIIIL-GSHRVAADTRNPWRSPERMAMIEACLSP--QILKRVHFLTVR-DW 83 (341)
T ss_dssp EECCTTCCHHHHHHHHHHHHHEE-----EEEEEE-EEETCCCCSSSCSCHHHHHHHHHTTSCH--HHHTTEEEEEEE-CC
T ss_pred EEEeCCCCHHHHHHHHHHHHhCC-----eEEEEE-CCcccCCCCCCCCCHHHHHHHHHHHhhh--ccCCeEEEEECC-CC
Confidence 33899999999999886654321 111222 2111 1345568999998866654431 111233331222 22
Q ss_pred CCCChhHHHHHHHHH---Hhc---CCcEEEecCCCC
Q 014895 339 HYAGPTEVQWHAKAR---INA---GANFYIVGRDPA 368 (416)
Q Consensus 339 ryAGPREAllHAiiR---kNy---GcTHfIVGRDHA 368 (416)
.++- ..|+..++ +.+ +|+..++|.|..
T Consensus 84 ~~~~---~~w~~~~~~l~~~l~r~~~~~~~~g~~~~ 116 (341)
T 2qjo_A 84 LYSD---NLWLAAVQQQVLKITGGSNSVVVLGHRKD 116 (341)
T ss_dssp TTCH---HHHHHHHHHHHHHHHTTCSCEEEEECCCS
T ss_pred cCCh---HHHHHHHHHHhHHhcCCCceEEEEcCCCC
Confidence 1221 23333221 222 289999998873
No 33
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=85.77 E-value=0.88 Score=44.80 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=63.4
Q ss_pred CeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccc----cCC---CC-CCCCChHHHHHHHHHHHHcCcCCCC
Q 014895 256 DAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPL----GGF---TK-ADDVPLDVRMEQHSKVLEDGVLDPE 327 (416)
Q Consensus 256 ~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~Pl----vG~---tK-~dDip~~vR~r~y~~~l~~~y~p~~ 327 (416)
.+|++.=+-+-+|+||..|++.+.+.|.+.+.+..++-..|. ... .. .--.+.+-|.+.++.+ | -+
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l---G---VD 94 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE---G---VE 94 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH---T---CC
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc---C---CC
Confidence 468887799999999999998877666555433222333341 121 11 1235667787766543 2 23
Q ss_pred ceEEEeCCCCcCCC--ChhHHHHHHHHHHhcCCcEEEecCCC
Q 014895 328 TTIVSIFPSPMHYA--GPTEVQWHAKARINAGANFYIVGRDP 367 (416)
Q Consensus 328 ~~~l~ilP~~mryA--GPREAllHAiiRkNyGcTHfIVGRDH 367 (416)
. ++ ++|.+-.+| .|.| -.+-++ +.+++.+++||-|+
T Consensus 95 ~-v~-~~~F~~~~a~ls~e~-Fv~~ll-~~l~~~~ivvG~Df 132 (308)
T 3op1_A 95 E-LY-LLDFSSQFASLTAQE-FFATYI-KAMNAKIIVAGFDY 132 (308)
T ss_dssp E-EE-EECCCHHHHTCCHHH-HHHHHH-HHHTEEEEEEETTC
T ss_pred E-EE-EecCCHHHHcCCHHH-HHHHHH-HHcCCCEEEECcCC
Confidence 3 33 677665444 4544 445455 58999999999995
No 34
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=84.99 E-value=5.1 Score=38.99 Aligned_cols=88 Identities=9% Similarity=0.072 Sum_probs=50.3
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCC------C----CCCCChHHHHHHHHHHHHcCcCCCCceEEE
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFT------K----ADDVPLDVRMEQHSKVLEDGVLDPETTIVS 332 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~t------K----~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ 332 (416)
|-||+|.||..+++.| .+.. +-+.+-|..-.. | ..-++.+.|++-.+..++ .+| +++.+.
T Consensus 10 tFdP~h~GHl~~~~~a----~~~~---d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~--~~~-~~~~v~ 79 (365)
T 1lw7_A 10 KFYPVHTGHINMIYEA----FSKV---DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFK--YQK-NQIFIH 79 (365)
T ss_dssp CCSSCCHHHHHHHHHH----HTTC---SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTS--TTT-TTEEEE
T ss_pred eeCCCCHHHHHHHHHH----HHHC---CEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhh--cCC-CcEEEE
Confidence 8999999999998754 3442 555554543332 0 224999999999888775 333 213232
Q ss_pred eCC-CCcC-CC-Ch--hHHHHHHHHHH-hcCCcE
Q 014895 333 IFP-SPMH-YA-GP--TEVQWHAKARI-NAGANF 360 (416)
Q Consensus 333 ilP-~~mr-yA-GP--REAllHAiiRk-NyGcTH 360 (416)
.+. .... |+ +- .+..+..++|. .+.++.
T Consensus 80 ~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~ 113 (365)
T 1lw7_A 80 HLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSI 113 (365)
T ss_dssp EEECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSE
T ss_pred EeccCCCCCCchHHHHHHHHHHHHhhccCCCCcE
Confidence 221 1111 21 00 34566777775 455654
No 35
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=81.89 E-value=1.2 Score=38.85 Aligned_cols=53 Identities=17% Similarity=0.280 Sum_probs=35.4
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCC--C--CCCCChHHHHHHHHHHH-Hc
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFT--K--ADDVPLDVRMEQHSKVL-ED 321 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~t--K--~dDip~~vR~r~y~~~l-~~ 321 (416)
|-||+|.||..+.+.|.+. +. +-+++-|-.... | ..-++.+.|++-.+.++ ++
T Consensus 8 tFDPiH~GHl~l~~~a~~~----~~--d~viv~v~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~ 65 (148)
T 3do8_A 8 TFEPLHEGHKKLIDVAIKL----GG--RDITIGVTSDRMARARIRSVLPFAIRAENVKRYVMRK 65 (148)
T ss_dssp CCSSCCHHHHHHHHHHHHH----HT--TCEEEEEECHHHHHHHSCCCSCHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHh----CC--CEEEEEECCCccccccCCCCCCHHHHHHHHHHHHhcc
Confidence 8999999999998766442 21 223332332221 2 45689999999999888 63
No 36
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=80.36 E-value=3.5 Score=38.73 Aligned_cols=63 Identities=22% Similarity=0.285 Sum_probs=41.1
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCC-CCCeEEEccccC-CCCCCCCChHHHHHHHHHHHH
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGY-KNPILLLHPLGG-FTKADDVPLDVRMEQHSKVLE 320 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~-~~~~lLl~PlvG-~tK~dDip~~vR~r~y~~~l~ 320 (416)
++..=|-||+|.||..|++.|.+.+.+.+. ...++++.|... ..|..-++.+.|++-.+..++
T Consensus 9 ~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~ 73 (252)
T 1nup_A 9 LLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQ 73 (252)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGG
T ss_pred EEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhc
Confidence 343448999999999999887765433210 011134445432 235567899999999888776
No 37
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=76.18 E-value=6.4 Score=34.84 Aligned_cols=94 Identities=17% Similarity=0.236 Sum_probs=51.3
Q ss_pred ecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCC-CC--CCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCc
Q 014895 262 QLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGF-TK--ADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPM 338 (416)
Q Consensus 262 QTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~-tK--~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~m 338 (416)
=+-||+|.||..|++.|.+.+ +. +-+++-|.... .| ..-.+.+.|++-.+..+++ .| . +. +-....
T Consensus 9 GsFdp~H~GH~~l~~~a~~~~---~~--d~v~~~~~~~~~~k~~~~~~~~~~R~~m~~~a~~~--~~-~-v~--v~~~e~ 77 (189)
T 2h29_A 9 GQFNPIHTAHMIVASEVFHEL---QP--DEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDE--LG-F-GD--ICDDEI 77 (189)
T ss_dssp ECCTTCCHHHHHHHHHHHHHH---CC--SEEEEEECSBCTTSCCCSSCCCHHHHHHHHHHHHH--HT-C-CE--ECCHHH
T ss_pred ecCCcccHHHHHHHHHHHHHc---CC--CEEEEEECCCCCCCcCCCCCCHHHHHHHHHHHHcC--CC-C-EE--EehHHh
Confidence 389999999999998765432 21 22333343222 23 3457999999998877752 32 2 22 233222
Q ss_pred CCCChhH--HHHHHHHHHhcCCc--EEEecCCC
Q 014895 339 HYAGPTE--VQWHAKARINAGAN--FYIVGRDP 367 (416)
Q Consensus 339 ryAGPRE--AllHAiiRkNyGcT--HfIVGRDH 367 (416)
.-.||.- -.+.. +++.|.-+ .||+|-|-
T Consensus 78 ~~~~~syt~dtl~~-l~~~~p~~~~~~i~G~D~ 109 (189)
T 2h29_A 78 KRGGQSYTYDTIKA-FKEQHKDSELYFVIGTDQ 109 (189)
T ss_dssp HHCSBCCHHHHHHH-HHHHSTTEEEEEEEEHHH
T ss_pred cCCCCCCHHHHHHH-HHHHCCCCcEEEEEecch
Confidence 2234321 12222 24444332 78888875
No 38
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=73.71 E-value=2.5 Score=41.10 Aligned_cols=55 Identities=15% Similarity=0.158 Sum_probs=36.6
Q ss_pred CCHHHHHHHHH---hcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccC
Q 014895 241 LSPQQLRKEFD---NRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGG 299 (416)
Q Consensus 241 ~tP~e~R~~f~---~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG 299 (416)
.++.|+|+..+ +.| ++|+..=|-+-+|+||..|++.|.+.+- . ....++.||.--
T Consensus 5 ~~~~el~~~~~~~r~~g-~~V~~vgtfdgLH~GH~sLI~~A~~~ad-~--vVVSffvnP~qf 62 (280)
T 2ejc_A 5 ETIEEMKKFSEEMREKK-KTIGFVPTMGYLHEGHLSLVRRARAEND-V--VVVSIFVNPTQF 62 (280)
T ss_dssp CCHHHHHHHHHHHHHTT-CCEEEEEECSCCCHHHHHHHHHHHHHSS-E--EEEEECCCGGGC
T ss_pred eCHHHHHHHHHHHHhcC-CEEEEEcCCccccHHHHHHHHHHHHhCC-E--EEEEEeCChHHh
Confidence 57888887543 333 4676667999999999999987654221 1 123466688743
No 39
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=70.57 E-value=3.6 Score=36.87 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=58.8
Q ss_pred cCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEcccc-CCCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCCCCcC--
Q 014895 263 LRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLG-GFTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFPSPMH-- 339 (416)
Q Consensus 263 TRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~Plv-G~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP~~mr-- 339 (416)
|-||+|.||..+.+ ++ +.- +-+++-|.. -..|.+-++++.|++-.+..+++ .|...+. +-.+...
T Consensus 10 sFdPih~GHl~i~~-a~----~~~---d~v~~~p~~~~~~k~~~~~~~~R~~m~~~a~~~--~~~~~~~--v~~~E~~l~ 77 (177)
T 3h05_A 10 AFNPPSLGHKSVIE-SL----SHF---DLVLLEPSIAHAWGKNMLDYPIRCKLVDAFIKD--MGLSNVQ--RSDLEQALY 77 (177)
T ss_dssp CCSSCCHHHHHHHT-TC----TTS---SEEEEEECC-------CCCHHHHHHHHHHHHHH--HCCTTEE--ECCHHHHHC
T ss_pred ccchhhHHHHHHHH-HH----HHC---CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHhc--CCCCcEE--EEehhhhcc
Confidence 89999999999974 32 221 445554654 23456779999999999988863 3322333 3333221
Q ss_pred CCC-hh--HHHHHHHHHHhcCCc--EEEecCCCC-CCCCCCCCCCCCCCchHHHHHHhh
Q 014895 340 YAG-PT--EVQWHAKARINAGAN--FYIVGRDPA-GMGHPTEKRDLYDPDHGKKVLSMA 392 (416)
Q Consensus 340 yAG-PR--EAllHAiiRkNyGcT--HfIVGRDHA-GvG~~~~~~~~Y~~~~aq~i~~~~ 392 (416)
-.| |. =-.+.. +++.|.-. .||+|-|-. +.. .+| +.++|++.+
T Consensus 78 ~~~~~syT~dTl~~-l~~~~p~~~~~~iiG~D~l~~l~------~W~---~~~~l~~~~ 126 (177)
T 3h05_A 78 QPGQSVTTYALLEK-IQEIYPTADITFVIGPDNFFKFA------KFY---KAEEITERW 126 (177)
T ss_dssp ----CCCHHHHHHH-HHHHSTTSEEEEEECHHHHHTGG------GST---THHHHHHHS
T ss_pred cCCCCcchHHHHHH-HHHHhcCCCeEEEEecchhhhcc------cch---hHHHHHHhC
Confidence 122 32 122333 35556544 489999832 333 244 467788764
No 40
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=69.08 E-value=16 Score=35.00 Aligned_cols=81 Identities=17% Similarity=0.118 Sum_probs=49.9
Q ss_pred EEEeecCCCCchhHHHHHHHHHHHHHHcCC-CCCeEEEccccC-CCCCCCCChHHHHHHHHHHHHcCcCCCCceEEEeCC
Q 014895 258 IFAFQLRNPIHNGHALLMNDTRRRLLEMGY-KNPILLLHPLGG-FTKADDVPLDVRMEQHSKVLEDGVLDPETTIVSIFP 335 (416)
Q Consensus 258 VvaFQTRNPlHRaHE~l~r~a~~~ale~~~-~~~~lLl~PlvG-~tK~dDip~~vR~r~y~~~l~~~y~p~~~~~l~ilP 335 (416)
++..=|-||+|.||..|++.|.+.+..-+. ...++++.|... ..|..-.+.+.|++-.+.++. + . +. +.+.+
T Consensus 11 ~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K~~l~s~~~R~~ml~~ai~-~-~--~~--~~v~~ 84 (279)
T 1kqn_A 11 LLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATK-N-S--KW--VEVDT 84 (279)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTT-T-C--SS--EEECC
T ss_pred EEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccccCCCCHHHHHHHHHHHhc-C-C--Cc--EEEec
Confidence 444448999999999999887664432110 011224445421 335567899999998887764 2 2 22 33667
Q ss_pred CCcCCCChh
Q 014895 336 SPMHYAGPT 344 (416)
Q Consensus 336 ~~mryAGPR 344 (416)
....-.|+.
T Consensus 85 ~E~~~~~~s 93 (279)
T 1kqn_A 85 WESLQKEWK 93 (279)
T ss_dssp TGGGCSSCC
T ss_pred cccccCCCC
Confidence 777777774
No 41
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=68.87 E-value=5.1 Score=39.87 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=56.1
Q ss_pred CeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEE----EccccCC-CCCCCCChHHHHHHHHHHHHcCcCCCCceE
Q 014895 256 DAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILL----LHPLGGF-TKADDVPLDVRMEQHSKVLEDGVLDPETTI 330 (416)
Q Consensus 256 ~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lL----l~PlvG~-tK~dDip~~vR~r~y~~~l~~~y~p~~~~~ 330 (416)
++|+..=+-+|+|.||..++++| .+++ +-+. -.|.+-. +++--++.+-|++..+++ + +. +.++
T Consensus 8 ~~v~~~G~FD~lH~GH~~lL~~A----~~l~---d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l-~--~V--D~Vv 75 (341)
T 3elb_A 8 VRVWCDGCYDMVHYGHSNQLRQA----RAMG---DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAI-K--WV--DEVV 75 (341)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHH----HHTS---SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHB-T--TC--CEEE
T ss_pred eEEEEEeeCCCCCHHHHHHHHHH----HHhC---CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHc-C--CC--CEEE
Confidence 46777679999999999999765 3454 3222 1222111 123457899999987763 2 33 3332
Q ss_pred EEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCC
Q 014895 331 VSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAG 369 (416)
Q Consensus 331 l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAG 369 (416)
. .-|. .-|.|-+ +.++|..++.|-|+..
T Consensus 76 ~-f~~~----~~~~efi------~~~~~d~vV~G~D~~~ 103 (341)
T 3elb_A 76 P-AAPY----VTTLETL------DKYNCDFCVHGNDITL 103 (341)
T ss_dssp E-TCCS----SCCHHHH------HHTTCSEEEECSCCCB
T ss_pred e-cCCC----CCHHHHH------HHhCCCEEEECCCCCC
Confidence 1 1122 2344442 6899999999999874
No 42
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=68.82 E-value=1.6 Score=42.61 Aligned_cols=62 Identities=23% Similarity=0.259 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCC
Q 014895 240 RLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVP 307 (416)
Q Consensus 240 r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip 307 (416)
-.|++|+|+.+.+ | ++|.-.=|=.=+|+||..|++.|.+.+ ......+++||+- -...+|++
T Consensus 8 ~~ti~~lr~~~~~-g-~~ig~VPTMG~LH~GH~sLi~~A~~~~---d~vVvSifvnP~q-f~~~ed~~ 69 (283)
T 3uk2_A 8 ISSIQELRDQLRG-Q-NRTAFVPTMGNLHEGHLSLMRLARQHG---DPVVASIFVNRLQ-FGPNEDFD 69 (283)
T ss_dssp ECCHHHHHHHTTT-C-SSCEEEEECSSCCHHHHHHHHHHHTTC---SSEEEEECCCGGG-SCTTSCTT
T ss_pred EcCHHHHHHHHHc-C-CeEEEECCCCcccHHHHHHHHHHHHhC---CEEEEEEcCCHHH-cCCccccc
Confidence 4589999999986 3 456555599999999999998664321 1112357889985 33445543
No 43
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=66.70 E-value=3.9 Score=35.69 Aligned_cols=55 Identities=11% Similarity=0.171 Sum_probs=41.3
Q ss_pred CCCeEEEeCCCCCEEEEEEeccccccCHHHHHH--HhhCCCCCCCcchhhhcccCCcEEEEeeEEE
Q 014895 163 STTNVALLGPTGDLIGILRSIEIYKHNKEERIA--RTWGTTAAGLPYVEEVITPAGNWLVGGDLEV 226 (416)
Q Consensus 163 ~G~~vaL~d~eG~~vAiL~V~eiy~~Dk~~ea~--~VfGT~d~~HPgV~~~~~~~g~~~vgG~i~~ 226 (416)
+|.++-|+|.+|++++....++. +-.|- -++.+++++||-.+ ..|+|.|+|++.+
T Consensus 54 ~~~r~~l~d~eG~Il~~~~~~~~-----~~ralrnFi~~sd~~~~P~qk----~ygr~~i~GPf~i 110 (138)
T 3v67_A 54 PRPRVFFSDYNGNVLTTDKRSNF-----QLRAMQNFVTSIEDYNKPKQR----LYGRYMIAGPVPI 110 (138)
T ss_dssp CSCEEEEECTTSCEECCCCSCHH-----HHHHHHHHHHHCSCTTSCEEE----EETTEEEEEEEEE
T ss_pred CCccEEEEcCCCCEecCCcccch-----hHHHHHHHHHhccCccCchhh----hhCcEEEeCCEEE
Confidence 57789999999999997765431 11233 34577888899876 4799999999876
No 44
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=66.14 E-value=6.1 Score=38.27 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccc
Q 014895 239 YRLSPQQLRKEFDNRQ-ADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPL 297 (416)
Q Consensus 239 ~r~tP~e~R~~f~~rg-w~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~Pl 297 (416)
.-.|++|+|+...+.. -++|.-.=|=.-+|.||..|++.|.+ +.......+|+||+
T Consensus 6 i~~ti~~lr~~~~~~~~g~~ig~VPTMGaLH~GHlsLv~~Ar~---~~d~vVVSIFVNP~ 62 (264)
T 3n8h_A 6 IADNIKQFHSIRNSLIKQQKIGFVPTMGALHNGHISLIKKAKS---ENDVVIVSIFVNPT 62 (264)
T ss_dssp EECSHHHHHHHHHTSCTTSCEEEEEECSSCCHHHHHHHHHHHH---HCSEEEEEECCCGG
T ss_pred EEcCHHHHHHHHHHHhCCCcEEEECCCcchhHHHHHHHHHHHH---hCCEEEEEEccCcc
Confidence 3458999999987531 13455555999999999999987643 22111235778887
No 45
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=66.04 E-value=4.2 Score=40.31 Aligned_cols=65 Identities=18% Similarity=0.198 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHHh--cCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCCh
Q 014895 240 RLSPQQLRKEFDN--RQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVPL 308 (416)
Q Consensus 240 r~tP~e~R~~f~~--rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip~ 308 (416)
-.|+.|+|+...+ +.-++|.-+=|=.=+|.||..|++.|.+.+ ......+|+||+=- ...+|++.
T Consensus 25 i~t~~elr~~~~~~r~~g~~IgfVPTMG~LH~GHlsLi~~A~~~~---d~vVVSIFVNP~QF-~~~EDl~~ 91 (314)
T 3inn_A 25 IHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRARVEN---DVTLVSIFVNPLQF-GANEDLGR 91 (314)
T ss_dssp ECSHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHHHHHC---SEEEEEECCCGGGS-CTTSSTTT
T ss_pred EcCHHHHHHHHHHHHHcCCeEEEEcCCCccCHHHHHHHHHHHHhC---CEEEEEECCChhhc-CCCccccc
Confidence 3589999988752 223456555688889999999998764421 11123678888732 34455543
No 46
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=59.88 E-value=4.7 Score=39.48 Aligned_cols=54 Identities=17% Similarity=0.313 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHh--cCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcC-CCCCeEEEccc
Q 014895 240 RLSPQQLRKEFDN--RQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMG-YKNPILLLHPL 297 (416)
Q Consensus 240 r~tP~e~R~~f~~--rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~-~~~~~lLl~Pl 297 (416)
-.|++|+|+...+ +.-++|.-.=|=.=+|.||..|++.|. +.+ .....+|+||+
T Consensus 7 ~~t~~elr~~~~~~r~~g~~IgfVPTMG~LH~GHlsLv~~Ar----~~~d~vVVSIFVNP~ 63 (287)
T 3q12_A 7 IETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDEAK----TRADVVVVTIFVNPL 63 (287)
T ss_dssp ECSHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHHH----TTSSEEEEEECCCGG
T ss_pred ECCHHHHHHHHHHHHHcCCeEEEEcCCCcccHHHHHHHHHHH----HhCCEEEEEeccCcc
Confidence 3589999988753 222455555577779999999998653 322 01235677776
No 47
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=59.76 E-value=5.3 Score=38.92 Aligned_cols=61 Identities=13% Similarity=0.227 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHH---hcCCCeEEEe--ecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCC
Q 014895 240 RLSPQQLRKEFD---NRQADAIFAF--QLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVP 307 (416)
Q Consensus 240 r~tP~e~R~~f~---~rgw~~VvaF--QTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip 307 (416)
..|+.|+|+... +.| ++| || -.-| +|+||..|++.|.+.+. .....++.||.--. .++|++
T Consensus 5 ~~~~~~l~~~~~~~r~~g-~~I-~fVpTmG~-lH~GH~~LI~~a~~~a~---~vVvsffvnP~qf~-~~ed~~ 70 (283)
T 3ag6_A 5 ITTVKEMQHIVKAAKRSG-TTI-GFIPTMGA-LHDGHLTMVRESVSTND---ITIVSVFVNPLQFG-PNEDFD 70 (283)
T ss_dssp ECCHHHHHHHHHHHHHTT-CCE-EEEEECSS-CCHHHHHHHHHHHTTSS---EEEEEECCCGGGCC-TTSSTT
T ss_pred EcCHHHHHHHHHHHHhcC-CcE-EEEECCcc-ccHHHHHHHHHHHHhCC---EEEEEEeCChhhcC-Cccccc
Confidence 357888987543 333 333 33 2344 99999999986643211 11235788887432 334443
No 48
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=58.83 E-value=3.6 Score=39.95 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCC
Q 014895 240 RLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDV 306 (416)
Q Consensus 240 r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDi 306 (416)
..++.|+|+...+.|...|+ |=.-+|+||..|++.|.+.+ ......++.||.-- .+++|.
T Consensus 4 ~~~~~~l~~~~~~~gi~~Vp---TmG~lH~GH~~Li~~A~~~a---~~vVvsff~nP~qf-~~~ed~ 63 (276)
T 1v8f_A 4 VSTVAELRAALPREGVGFVP---TMGYLHRGHLALVERARREN---PFVVVSVFVNPLQF-GPGEDY 63 (276)
T ss_dssp ECSHHHHHHHCCSSCEEEEE---ECSSCCHHHHHHHHHHHHHC---SEEEEEECCCGGGC-CTTSST
T ss_pred EecHHHHHHHHhhcCceEEE---eCCCccHHHHHHHHHHHHhC---CEEEEEEECCHHHh-CCCccc
Confidence 35789999887544511222 33339999999998775432 11123577888742 234443
No 49
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=58.02 E-value=24 Score=33.47 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=64.1
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEE----ccccCCCC-CCCCChHHHHH
Q 014895 239 YRLSPQQLRKEFDNRQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLL----HPLGGFTK-ADDVPLDVRME 313 (416)
Q Consensus 239 ~r~tP~e~R~~f~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl----~PlvG~tK-~dDip~~vR~r 313 (416)
.+.|-.+.+..-...+-.+|+..=|-+|+|.||..++++| .++. .++-|.+ .+.+-..| .--++.+-|++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~V~~~GtFD~~H~GHl~iL~rA----k~lf-~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e 134 (236)
T 3hl4_A 60 VRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQA----KNLF-PNTYLIVGVCSDELTHNFKGFTVMNENERYD 134 (236)
T ss_dssp CCCCHHHHHHCCCTTSCEEEEEEECCTTCCHHHHHHHHHH----HTSS-SSEEEEEEECCHHHHHHHTCCCSSCHHHHHH
T ss_pred hhccHHHHhcCCCCCCCeEEEEeccCCCCCHHHHHHHHHH----HHhc-CCCeEEEEEcccHHHhhcCCCCCCCHHHHHH
Confidence 4567777766655555556777779999999999998765 3441 1132333 23221112 34789999999
Q ss_pred HHHHHHHcCcCCCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCC
Q 014895 314 QHSKVLEDGVLDPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDP 367 (416)
Q Consensus 314 ~y~~~l~~~y~p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDH 367 (416)
..+++ . +. +.+++ .-|+.. .. =..+.+||+.++.|-|.
T Consensus 135 ~v~~~-k--~V--D~Vvv-~~p~~l-----~~-----d~i~~~~~d~Vv~GDd~ 172 (236)
T 3hl4_A 135 AVQHC-R--YV--DEVVR-NAPWTL-----TP-----EFLAEHRIDFVAHDDIP 172 (236)
T ss_dssp HHHTB-T--TC--SEEES-SCCSSC-----CH-----HHHHHTTCCEEEEESSC
T ss_pred HHHHh-C--CC--CeEEE-CCcCcC-----cH-----HHHHHcCCCEEEECCcc
Confidence 88753 2 44 33433 223221 11 12247899988888763
No 50
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=52.05 E-value=7.2 Score=38.11 Aligned_cols=63 Identities=14% Similarity=0.229 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHh--cCCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEccccCCCCCCCCC
Q 014895 240 RLSPQQLRKEFDN--RQADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGFTKADDVP 307 (416)
Q Consensus 240 r~tP~e~R~~f~~--rgw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~~lLl~PlvG~tK~dDip 307 (416)
-.|++|+|+...+ +.-++|.-.=|=.-+|.||..|++.|.+ + +. ....+|+||+= ....+|+.
T Consensus 7 ~~ti~elr~~~~~~~~~g~~Ig~VPTMGaLH~GHlsLv~~Ar~-~-d~--VVVSIFVNP~Q-F~~~EDl~ 71 (285)
T 3mxt_A 7 ITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHAKT-Q-DK--VIVSIFVNPMQ-FGPNEDFS 71 (285)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEEEECSSCCHHHHHHHHHHTT-S-SE--EEEEECCCGGG-CCTTSCTT
T ss_pred EcCHHHHHHHHHHHHHcCCeEEEEcCCCcccHHHHHHHHHHHh-C-CE--EEEEeccCccc-cCCchhhh
Confidence 3589999988753 2224555555888999999999986532 1 11 12357888883 23345543
No 51
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=49.71 E-value=11 Score=37.51 Aligned_cols=94 Identities=11% Similarity=0.059 Sum_probs=56.9
Q ss_pred CCCeEEEeecCCCCchhHHHHHHHHHHHHHHcCCCCC--eEEE----ccccCCCC---CCCCChHHHHHHHHHHHHcCcC
Q 014895 254 QADAIFAFQLRNPIHNGHALLMNDTRRRLLEMGYKNP--ILLL----HPLGGFTK---ADDVPLDVRMEQHSKVLEDGVL 324 (416)
Q Consensus 254 gw~~VvaFQTRNPlHRaHE~l~r~a~~~ale~~~~~~--~lLl----~PlvG~tK---~dDip~~vR~r~y~~~l~~~y~ 324 (416)
|-+.|+.-=|-+|+|.||..++++| .+++ + -|.+ ++.+-..| .--++.+-|+++.+++ + |.
T Consensus 197 ~~~iv~~~GsFD~~h~GHl~~L~rA----~~l~---D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~-~--~v 266 (341)
T 3elb_A 197 GETVIYVAGAFDLFHIGHVDFLEKV----HRLA---ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLAC-R--YV 266 (341)
T ss_dssp TCEEEEEEECCTTCCHHHHHHHHHH----HTTS---SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTB-T--TC
T ss_pred CCEEEEEecccCCCCHHHHHHHHHH----HHhC---CCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHc-C--CC
Confidence 3334555559999999999998754 4565 4 2322 22111113 2468999999988853 3 44
Q ss_pred CCCceEEEeCCCCcCCCChhHHHHHHHHHHhcCCcEEEecCCCCCC
Q 014895 325 DPETTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGM 370 (416)
Q Consensus 325 p~~~~~l~ilP~~mryAGPREAllHAiiRkNyGcTHfIVGRDHAGv 370 (416)
+.+++ .-|+. ... =+.+.+||+-++-|.|+...
T Consensus 267 --d~V~v-~~~~~-----l~~-----~~~~~~~~~~iv~G~d~~~~ 299 (341)
T 3elb_A 267 --SEVVI-GAPYA-----VTA-----ELLSHFKVDLVCHGKTEIIP 299 (341)
T ss_dssp --CEEEE-EECSS-----CCH-----HHHHHTTCSEEEECSSCCCC
T ss_pred --CCEEE-CCCCc-----chH-----HHHHhcCCcEEEECCCCccc
Confidence 44554 22321 111 12356799999999987654
No 52
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=36.11 E-value=1.8e+02 Score=29.57 Aligned_cols=44 Identities=25% Similarity=0.387 Sum_probs=32.9
Q ss_pred CHHHHHHHHHhcCCCeEEEeecCCC-CchhHHHHHHHHHHHHHHcC
Q 014895 242 SPQQLRKEFDNRQADAIFAFQLRNP-IHNGHALLMNDTRRRLLEMG 286 (416)
Q Consensus 242 tP~e~R~~f~~rgw~~VvaFQTRNP-lHRaHE~l~r~a~~~ale~~ 286 (416)
...++++.+..+..+-..|||.-.| +|-||.--++ .+..+.+.|
T Consensus 18 ~~~~L~~~L~~~~~~iy~G~dPTg~sLHlGh~v~l~-~l~~lQ~~G 62 (419)
T 2ts1_A 18 DEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATIL-TMRRFQQAG 62 (419)
T ss_dssp CHHHHHHHHHHSCCEEEEEECCSSSSCBGGGHHHHH-HHHHHHHTT
T ss_pred CHHHHHHHHcCCCCEEEEeeCCCCCCccHHHHHHHH-HHHHHHHCC
Confidence 4678999998777777899998888 9999965433 334555555
No 53
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=34.42 E-value=72 Score=26.95 Aligned_cols=57 Identities=23% Similarity=0.216 Sum_probs=38.1
Q ss_pred ceeEEEecChHHHhhcCCC-----------CeEEEeCCCCCEEEEEEeccccc-cCHHHHHHHhhCCCC
Q 014895 146 SLPIVLAIDDETKERIGST-----------TNVALLGPTGDLIGILRSIEIYK-HNKEERIARTWGTTA 202 (416)
Q Consensus 146 piPItL~V~~e~a~~L~~G-----------~~vaL~d~eG~~vAiL~V~eiy~-~Dk~~ea~~VfGT~d 202 (416)
++|+..|...+.++.+..- -...|+|++|++++.....+... .+-++..+.+..|.-
T Consensus 100 ~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 100 NVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred CceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 4588888776666665442 25788899999999987555543 355666666666554
No 54
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=29.19 E-value=1.8e+02 Score=28.10 Aligned_cols=44 Identities=16% Similarity=0.318 Sum_probs=32.4
Q ss_pred CHHHHHHHHHhcCCCeEEEeecCCC-CchhHHHHHHHHHHHHHHcC
Q 014895 242 SPQQLRKEFDNRQADAIFAFQLRNP-IHNGHALLMNDTRRRLLEMG 286 (416)
Q Consensus 242 tP~e~R~~f~~rgw~~VvaFQTRNP-lHRaHE~l~r~a~~~ale~~ 286 (416)
...++++.++.+..+-..|||.-.+ +|-||.--++ -+..+.+.|
T Consensus 21 ~~~~l~~~l~~~~~~vy~G~~PTg~slHlGh~l~l~-~~~~lQ~~g 65 (322)
T 2yxn_A 21 DEEALAERLAQGPIALVCGFDPTADSLHLGHLVPLL-CLKRFQQAG 65 (322)
T ss_dssp SHHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHH-HHHHHHHTT
T ss_pred CHHHHHHHHcCCCCEEEEeecCCCCcccHHHHHHHH-HHHHHHHcC
Confidence 3788999998777777899998888 9999955333 233555555
No 55
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=27.22 E-value=1.2e+02 Score=24.17 Aligned_cols=62 Identities=11% Similarity=0.115 Sum_probs=33.0
Q ss_pred ceeEEEecChHHHhhcCC--CCeEEEeCCCCCEEEEEEeccccc-cCHHHHHHHhhCCCCCCCcc
Q 014895 146 SLPIVLAIDDETKERIGS--TTNVALLGPTGDLIGILRSIEIYK-HNKEERIARTWGTTAAGLPY 207 (416)
Q Consensus 146 piPItL~V~~e~a~~L~~--G~~vaL~d~eG~~vAiL~V~eiy~-~Dk~~ea~~VfGT~d~~HPg 207 (416)
++|+..+...+.++.+.. =-.+.|+|.+|+++....-..-+. .+-++..++.-+..+..||+
T Consensus 86 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~~~~~ 150 (152)
T 3gl3_A 86 EFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEGHHHH 150 (152)
T ss_dssp CSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--------
T ss_pred CCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccccccc
Confidence 447888877777665543 346788899999988765332221 12333455555666655654
No 56
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=25.01 E-value=27 Score=34.26 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=31.1
Q ss_pred CCCHHHHHHHH---HhcCCCeEEEeecCCCCchhHHHHHHHHHH-HHHHcCCCCCeEEEcccc
Q 014895 240 RLSPQQLRKEF---DNRQADAIFAFQLRNPIHNGHALLMNDTRR-RLLEMGYKNPILLLHPLG 298 (416)
Q Consensus 240 r~tP~e~R~~f---~~rgw~~VvaFQTRNPlHRaHE~l~r~a~~-~ale~~~~~~~lLl~Plv 298 (416)
..++.++|... .+.| ++|...=|=.=+|+||..|++.|.+ .+ .. ....+++||.-
T Consensus 15 i~~~~~l~~~~~~~r~~~-~~vg~VpTmG~LH~GH~sLI~~A~~~~a-~~--vVvSffvnP~q 73 (301)
T 3cov_A 15 YSAPGDVADVSRALRLTG-RRVMLVPTMGALHEGHLALVRAAKRVPG-SV--VVVSIFVNPMQ 73 (301)
T ss_dssp ECSHHHHHHHHHHHHHTT-CEEEEEEECSCCCHHHHHHHHHHHTSTT-EE--EEEEECCCGGG
T ss_pred EeCHHHHHHHHHHHHhcC-CcEEEEecCCcccHHHHHHHHHHHHhcC-CE--EEEEEcCChhh
Confidence 34678887653 2223 2322222433399999999986643 22 11 12357888874
No 57
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=24.82 E-value=1.4e+02 Score=25.46 Aligned_cols=39 Identities=8% Similarity=0.124 Sum_probs=28.8
Q ss_pred cceeEEEecChHHHhhcCC-----C---CeEEEeCCCCCEEEEEEec
Q 014895 145 MSLPIVLAIDDETKERIGS-----T---TNVALLGPTGDLIGILRSI 183 (416)
Q Consensus 145 wpiPItL~V~~e~a~~L~~-----G---~~vaL~d~eG~~vAiL~V~ 183 (416)
+++|+..|...+.++.+.. | -...|+|++|++++...-.
T Consensus 91 ~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 91 IKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp CCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecC
Confidence 4558888887777776654 2 4677889999999987644
No 58
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=24.57 E-value=47 Score=27.17 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=23.8
Q ss_pred HhhcCCCCeEEEeCCCCCEEEEEEecccccc
Q 014895 158 KERIGSTTNVALLGPTGDLIGILRSIEIYKH 188 (416)
Q Consensus 158 a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~ 188 (416)
++.+.....+.++|.+|+++|+++..|+.+.
T Consensus 109 ~~~~~~~~~lpVvd~~g~~~Giit~~dil~~ 139 (156)
T 3ctu_A 109 LHKLVDESFLPVVDAEGIFQGIITRKSILKA 139 (156)
T ss_dssp HHHTTTSSEEEEECTTSBEEEEEETTHHHHH
T ss_pred HHHHHHcCeEEEEcCCCeEEEEEEHHHHHHH
Confidence 4445554578888878999999999998743
No 59
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=23.92 E-value=42 Score=28.29 Aligned_cols=30 Identities=17% Similarity=0.296 Sum_probs=23.0
Q ss_pred HhhcCCCCeEEEeCCCCCEEEEEEeccccc
Q 014895 158 KERIGSTTNVALLGPTGDLIGILRSIEIYK 187 (416)
Q Consensus 158 a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~ 187 (416)
++.+.....+..+|.+|+++|+++.+|+.+
T Consensus 109 ~~~m~~~~~lpVVd~~g~l~GiiT~~Dil~ 138 (156)
T 3k6e_A 109 LHKLVDESFLPVVDAEGIFQGIITRKSILK 138 (156)
T ss_dssp HHHTTTSSEEEEECTTSBEEEEEEHHHHHH
T ss_pred HHHHHHcCCeEEEecCCEEEEEEEHHHHHH
Confidence 444555556667888999999999999873
No 60
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=22.36 E-value=1.6e+02 Score=29.81 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=33.0
Q ss_pred CHHHHHHHHHhcCCCeEEEeecCCC-CchhHHHHHHHHHHHHHHcC
Q 014895 242 SPQQLRKEFDNRQADAIFAFQLRNP-IHNGHALLMNDTRRRLLEMG 286 (416)
Q Consensus 242 tP~e~R~~f~~rgw~~VvaFQTRNP-lHRaHE~l~r~a~~~ale~~ 286 (416)
...++++.+..+..+-..|||.-.| +|-||.--++ .+..+.+.|
T Consensus 20 ~~~~L~~~L~~~~~~iy~G~dPTg~sLHlGh~v~l~-~~~~lQ~~G 64 (420)
T 1jil_A 20 DEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFL-TLRRFQEHG 64 (420)
T ss_dssp CHHHHHHHHHHSCCEEEEEECCSSSSCBHHHHHHHH-HHHHHHHTT
T ss_pred CHHHHHHHHcCCCCEEEEeeCCCCCCccHHHHHHHH-HHHHHHHCC
Confidence 4688999998777777899998888 9999965443 334555555
No 61
>1t62_A Conserved hypothetical protein; NYSGXRC, target T1587, unknown function, PSI, protein struct initiative; 3.00A {Enterococcus faecalis} SCOP: b.122.1.4
Probab=21.24 E-value=74 Score=28.60 Aligned_cols=27 Identities=11% Similarity=0.150 Sum_probs=22.9
Q ss_pred CCCCeEEEeCCCCCEEEEEEecccccc
Q 014895 162 GSTTNVALLGPTGDLIGILRSIEIYKH 188 (416)
Q Consensus 162 ~~G~~vaL~d~eG~~vAiL~V~eiy~~ 188 (416)
++|+.-.+.|.+|++++++.+++|...
T Consensus 67 ~vG~~~Ivld~~g~pvcii~tt~V~~~ 93 (166)
T 1t62_A 67 KAGQYDIILDGQSQPLAIIRTTKVEIM 93 (166)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEEEEEEEEE
Confidence 568888888999999999999998743
No 62
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=20.81 E-value=51 Score=26.21 Aligned_cols=22 Identities=9% Similarity=0.309 Sum_probs=16.7
Q ss_pred CeEEEeCCCCCEEEEEEecccc
Q 014895 165 TNVALLGPTGDLIGILRSIEIY 186 (416)
Q Consensus 165 ~~vaL~d~eG~~vAiL~V~eiy 186 (416)
..+..+|.+|+++|+++.+|+.
T Consensus 100 ~~~pVvd~~g~~~Giit~~Dil 121 (129)
T 3jtf_A 100 HLAIVIDEHGGISGLVTMEDVL 121 (129)
T ss_dssp CEEEEECC-CCEEEEEEHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHH
Confidence 4555677779999999998875
No 63
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=20.02 E-value=84 Score=25.74 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=24.0
Q ss_pred HHHhhcCCCCeEEEeCCCCCEEEEEEecccccc
Q 014895 156 ETKERIGSTTNVALLGPTGDLIGILRSIEIYKH 188 (416)
Q Consensus 156 e~a~~L~~G~~vaL~d~eG~~vAiL~V~eiy~~ 188 (416)
+.++.+.....+.++|.+|+++|+++..++.+.
T Consensus 107 ~a~~~m~~~~~lpVvd~~g~~vGiit~~dil~~ 139 (159)
T 1yav_A 107 KGFGMVINNGFVCVENDEQVFEGIFTRRVVLKE 139 (159)
T ss_dssp HHHHHTTTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeCCCeEEEEEEHHHHHHH
Confidence 334445555557778878999999999998754
Done!