Your job contains 1 sequence.
>014896
MTAATTAPTPPSLAVVNASIREKKEEIRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANK
MLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSLPQTHTQKMVSAFQVF
NGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRL
TGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQH
SLYDVTGSDTNTLCLLQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLGASYG
EESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISLAGNAATQA
TLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWRPLIHHPCNNINAISTRYSH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014896
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 1723 1.9e-177 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 1045 1.4e-105 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 582 1.6e-56 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 575 8.6e-56 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 369 2.6e-55 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 553 1.9e-53 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 548 6.3e-53 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 540 4.4e-52 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 536 1.2e-51 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 534 1.9e-51 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 520 5.8e-50 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 515 2.0e-49 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 509 8.5e-49 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 507 1.4e-48 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 465 1.6e-43 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 379 6.6e-41 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 432 1.2e-40 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 279 2.3e-40 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 428 1.3e-39 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 421 1.8e-39 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 403 1.6e-37 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 360 3.3e-32 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 352 7.1e-32 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 307 4.5e-27 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 293 1.2e-25 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 298 1.3e-25 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 232 8.8e-25 2
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 282 7.6e-23 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 280 1.1e-22 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 275 6.3e-22 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 253 5.6e-19 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 176 1.3e-10 1
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
Identities = 335/382 (87%), Positives = 359/382 (93%)
Query: 19 SIREKKEEIRQQKRDEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQR 78
++RE+KEEI++QK+DEEG QCAEAVSADNLEEANK+LLEISQLSTPYGTSAQR
Sbjct: 270 ALRERKEEIKRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQR 329
Query: 79 VAAYFSEAMSARLVSSCLGIYAALPS--LPQTHTQKMVSAFQVFNGISPFVKFSHFTANQ 136
VAAYFSEAMSARL++SCLGIYAALPS +PQTH+ KMVSAFQVFNGISP VKFSHFTANQ
Sbjct: 330 VAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQ 389
Query: 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196
AIQEAFE+ED VHIIDLDIMQGLQWPGLFHILASRPGGPP+VRLTGLGTSMEAL+ATGKR
Sbjct: 390 AIQEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKR 449
Query: 197 LSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLL 256
LSDFA+KLGLPFEFCP+AEKVGNLD ERLN+ KREAVAVHWLQHSLYDVTGSD +TL LL
Sbjct: 450 LSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLL 509
Query: 257 QRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSR 316
QRLAPKVVTVVEQDLS AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLS+
Sbjct: 510 QRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSK 569
Query: 317 EIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVE 376
EIRNVLAVGGPSRSG+VKF +WREK+Q+ GFKGISLAGNAATQATLLLGMFP DGYTLV+
Sbjct: 570 EIRNVLAVGGPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVD 629
Query: 377 DNGTLKLGWKDLCLLTASAWRP 398
DNGTLKLGWKDL LLTASAW P
Sbjct: 630 DNGTLKLGWKDLSLLTASAWTP 651
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 210/359 (58%), Positives = 266/359 (74%)
Query: 45 QCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCL-GIYAALP 103
QCAE V+ D+L EA+ +L EIS++ +P+G+S +RV AYF++A+ R++SS L G + L
Sbjct: 46 QCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLS 105
Query: 104 SLPQT--HTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQW 161
P T +QK+ SA Q +N +SP +KFSHFTANQAI +A + ED VHIIDLD+MQGLQW
Sbjct: 106 EKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQW 165
Query: 162 PGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNL- 220
P LFHILASRP +R+TG G+S + L +TG+RL+DFA L LPFEF P+ +GNL
Sbjct: 166 PALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLI 225
Query: 221 DPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQDLS--PAGSFL 278
DP +L + EAV VHW+QH LYDVTG++ TL +L+RL P ++TVVEQ+LS GSFL
Sbjct: 226 DPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFL 285
Query: 279 GRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNW 338
GRFVEA+HYYSALFD+LG GEES ER VEQ +L EIRN++A GG R K W
Sbjct: 286 GRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRR----KRMKW 341
Query: 339 REKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR 397
+E+L R GF+ +SL GN ATQA LLLGM P +GYTLVE+NGTL+LGWKDL LLTASAW+
Sbjct: 342 KEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 139/372 (37%), Positives = 205/372 (55%)
Query: 34 EEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVS 93
E G CAEAV +NL+ A+ ++ + L++ + ++VA YF+E ++ R
Sbjct: 147 ETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARR--- 203
Query: 94 SCLGIYAALPSLPQTHTQKMVSAFQV-FNGISPFVKFSHFTANQAIQEAFEREDRVHIID 152
IY P Q+ F P++KF+HFTANQAI E F ++VH+ID
Sbjct: 204 ----IYRIYPR-DDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVID 258
Query: 153 LDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCP 212
L + GLQWP L LA RP GPP RLTG+G S+ ++ G +L A +G+ FEF
Sbjct: 259 LGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTIGVNFEFKS 318
Query: 213 VA-EKVGNLDPERLNISKR-EAVAVHWL--QHSLYDVTGSDTNTLCLLQRLAPKVVTVVE 268
+A + +L PE L+I E+VAV+ + H L GS L ++ + P ++TVVE
Sbjct: 319 IALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVE 378
Query: 269 QDLSPAGS-FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGP 327
Q+ + G+ FL RF E++HYYS+LFDSL G S++R V+ + L R+I N++A G
Sbjct: 379 QEANHNGTVFLDRFTESLHYYSSLFDSLE---GPPSQDR-VMSELFLGRQILNLVACEGE 434
Query: 328 SR-SGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFP-CDGYTLVEDNGTLKLGW 385
R + WR + GFK +S+ NA QA++LL ++ DGY + E+ G L LGW
Sbjct: 435 DRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGW 494
Query: 386 KDLCLLTASAWR 397
+ L+ SAWR
Sbjct: 495 QTRPLIATSAWR 506
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 140/379 (36%), Positives = 213/379 (56%)
Query: 34 EEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVS 93
E G CAEA+ +NL A+ ++ + L+ + +VA YF++A++ R+
Sbjct: 175 ETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYR 234
Query: 94 SCLGIYAALPSLPQTHTQKMVSAFQV-FNGISPFVKFSHFTANQAIQEAFEREDRVHIID 152
Y A + ++ F P++KF+HFTANQAI EA RVH+ID
Sbjct: 235 D----YTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVID 290
Query: 153 LDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFAEKLGLPF 208
L + QG+QWP L LA RPGGPP RLTG+G + ++L+ G +L+ FA+ +G+ F
Sbjct: 291 LGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEF 350
Query: 209 EFCPVA-EKVGNLDPERLNIS-KREAVAVHWL--QHSLYDVTGSDTNTLCLLQRLAPKVV 264
EF +A E + +L+PE + E + V+ + H L +GS L ++ + P +V
Sbjct: 351 EFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIV 410
Query: 265 TVVEQDLSPAGS-FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLA 323
TVVEQ+ + G FL RF EA+HYYS+LFDSL SY S++R V+ + L R+I NV+A
Sbjct: 411 TVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDR-VMSEVYLGRQILNVVA 469
Query: 324 VGGPSRSGDVKFHN----WREKLQRSGFKGISLAGNAATQATLLLGMFPC-DGYTLVEDN 378
G R V+ H WR +++ +GF I L +A QA++LL ++ DGY + E++
Sbjct: 470 AEGSDR---VERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEEND 526
Query: 379 GTLKLGWKDLCLLTASAWR 397
G L +GW+ L+T SAW+
Sbjct: 527 GCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 369 (135.0 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 82/212 (38%), Positives = 122/212 (57%)
Query: 27 IRQQKRDEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEA 86
++ K +E G CA V++ +L+ AN L ++S L++P G + QR+AAYF+EA
Sbjct: 42 LKDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEA 101
Query: 87 MSARLVSSCLGIYAALPSLPQTHTQKMVSAFQV---FNGISPFVKFSHFTANQAIQEAFE 143
++ R++ S G+Y AL + QT T + V F + P +K S+ N+AI EA E
Sbjct: 102 LANRILKSWPGLYKAL-NATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAME 160
Query: 144 REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEK 203
E VH+IDLD + QW L SRP GPP++R+TG+ E LE RL + AEK
Sbjct: 161 GEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEK 220
Query: 204 LGLPFEFCPVAEKVGNLDPERLNISKREAVAV 235
L +PF+F PV ++ L+ E+L + EA+AV
Sbjct: 221 LDIPFQFNPVVSRLDCLNVEQLRVKTGEALAV 252
Score = 219 (82.2 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 53/154 (34%), Positives = 82/154 (53%)
Query: 246 TGSDTNTLCLLQRLAPKVVTVVEQDLSPAGSFL-GRFVEAIHYYSALFDSLGASYGEESE 304
+G + L + L+PKV+ V EQD GS L R +E+++ Y+ALFD L S+
Sbjct: 326 SGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQ 385
Query: 305 ERHVVEQQLLSREIRNVLAVGG-PSRSGDVKFHNWREKLQRSGFKGISLAGNAATQATLL 363
+R VE+ L EI+N+++ G R K W +++ +GF + L+ A QA L
Sbjct: 386 DRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRL 445
Query: 364 LGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR 397
L DGY + E++G + W+D L + SAWR
Sbjct: 446 LQGCGFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 141/378 (37%), Positives = 205/378 (54%)
Query: 34 EEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVS 93
E G CAEAV +NL A ++ +I L+ + ++VA YF+EA++ R
Sbjct: 164 ENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARR--- 220
Query: 94 SCLGIYAALPSL-PQTHTQKMVSAFQV-FNGISPFVKFSHFTANQAIQEAFEREDRVHII 151
IY PS P H+ + Q+ F P++KF+HFTANQAI EAF+ + RVH+I
Sbjct: 221 ----IYRLSPSQSPIDHS--LSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVI 274
Query: 152 DLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFAEKLGLP 207
D + QGLQWP L LA RPGGPP RLTG+G + + L G +L+ AE + +
Sbjct: 275 DFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVE 334
Query: 208 FEFCP-VAEKVGNLDPERLNI--SKREAVAVHWL--QHSLYDVTGSDTNTLCLLQRLAPK 262
FE+ VA + +LD L + S+ E+VAV+ + H L G+ L ++ ++ P+
Sbjct: 335 FEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPE 394
Query: 263 VVTVVEQDLSPAGS-FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNV 321
+ TVVEQ+ + FL RF E++HYYS LFDSL G S + V+ + L ++I NV
Sbjct: 395 IFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLE---GVPSGQDKVMSEVYLGKQICNV 451
Query: 322 LAVGGPSR-SGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPC-DGYTLVEDNG 379
+A GP R WR + +GF + NA QA++LL +F +GY + E +G
Sbjct: 452 VACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDG 511
Query: 380 TLKLGWKDLCLLTASAWR 397
L LGW L+ SAW+
Sbjct: 512 CLMLGWHTRPLIATSAWK 529
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 142/378 (37%), Positives = 200/378 (52%)
Query: 34 EEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVS 93
E G CAEA+ +NL A ++ +I L+ + ++VA YF+EA++ R
Sbjct: 216 ENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARR--- 272
Query: 94 SCLGIYAALPSLPQTHTQKMVS-AFQV-FNGISPFVKFSHFTANQAIQEAFEREDRVHII 151
IY P PQ +S Q+ F P++KF+HFTANQAI EAFE + RVH+I
Sbjct: 273 ----IYRLSP--PQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVI 326
Query: 152 DLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFAEKLGLP 207
D + QGLQWP L LA R GGPP RLTG+G + + L G +L+ AE + +
Sbjct: 327 DFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVE 386
Query: 208 FEFCP-VAEKVGNLDPERLNI--SKREAVAVHWL--QHSLYDVTGSDTNTLCLLQRLAPK 262
FE+ VA + +LD L + S EAVAV+ + H L G L +++++ P
Sbjct: 387 FEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPV 446
Query: 263 VVTVVEQDLSPAGS-FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNV 321
+ TVVEQ+ + G FL RF E++HYYS LFDSL G + + V+ + L ++I N+
Sbjct: 447 IFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE---GVPNSQDKVMSEVYLGKQICNL 503
Query: 322 LAVGGPSR-SGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPC-DGYTLVEDNG 379
+A GP R W + SG L NA QA++LL +F GY + E NG
Sbjct: 504 VACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNG 563
Query: 380 TLKLGWKDLCLLTASAWR 397
L LGW L+T SAW+
Sbjct: 564 CLMLGWHTRPLITTSAWK 581
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 134/375 (35%), Positives = 207/375 (55%)
Query: 33 DEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLV 92
+E G CAEAV +NL A+ ++ + L+ + +VA YF+EA++ R
Sbjct: 151 EETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARR-- 208
Query: 93 SSCLGIYAALPSLPQTHTQKMVSAFQV-FNGISPFVKFSHFTANQAIQEAFEREDRVHII 151
IY PS Q+ F P++KF+HFTANQAI EA VH+I
Sbjct: 209 -----IYRIHPSAAAIDPS-FEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVI 262
Query: 152 DLDIMQGLQWPGLFHILASRPGGPPYVRLTGLG--TSMEALEATGKRLSDFAEKLGLPFE 209
DL + QG+QWP L LA RPGGPP RLTG+G ++ E ++ G +L+ A+ +G+ F+
Sbjct: 263 DLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFK 322
Query: 210 FCPVA-EKVGNLDPERLNI-SKREAVAVHWL--QHSLYDVTGSDTNTLCLLQRLAPKVVT 265
F + E++ +L+P+ ++ E + V+ + H + GS L ++ + P +VT
Sbjct: 323 FNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVT 382
Query: 266 VVEQDLSPAGS-FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAV 324
VVEQ+ + G FL RF EA+HYYS+LFDSL S++R V+ + L R+I N++A
Sbjct: 383 VVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDR-VMSEVYLGRQILNLVAT 441
Query: 325 GGPSR-SGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPC-DGYTLVEDNGTLK 382
G R WR+++ +GF ++L +A QA+LLL + DGY + E++G+L
Sbjct: 442 EGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLM 501
Query: 383 LGWKDLCLLTASAWR 397
L W+ L+ ASAW+
Sbjct: 502 LAWQTKPLIAASAWK 516
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 137/371 (36%), Positives = 212/371 (57%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSL 105
CA +S + EA+K LL+I + + G +RVA YF+EA+S RL + + S
Sbjct: 224 CAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPN-----SPATSS 277
Query: 106 PQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLF 165
+ T+ ++ +++ N P+ KF+H TANQAI EA E+ +++HI+D I+QG+QWP L
Sbjct: 278 SSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALL 337
Query: 166 HILASRPGGPP-YVRLTG-----LGTSME-ALEATGKRLSDFAEKLGLPFEFCPVAEKVG 218
LA+R G P +R++G LG S E +L ATG RL DFA+ L L F+F P+ +
Sbjct: 338 QALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIH 397
Query: 219 NLDPERLNISKREAVAVHW-LQ-HSLYDVTGSDTNT-LCLLQRLAPKVVTVVEQDLS-PA 274
L+ + E +AV++ LQ + L D T + +T L L + L P+VVT+ E ++S
Sbjct: 398 LLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNR 457
Query: 275 GSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSG--- 331
F R A+ +YSA+F+SL + G +SEER VE++L R I ++ GP ++G
Sbjct: 458 VGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLI---GPEKTGIHR 514
Query: 332 ---DVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDG-YTLVEDN-GTLKLGWK 386
+ K WR ++ +GF+ + L+ A +QA +LL + Y++VE G + L W
Sbjct: 515 ERMEEK-EQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWN 573
Query: 387 DLCLLTASAWR 397
DL LLT S+WR
Sbjct: 574 DLPLLTLSSWR 584
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 130/369 (35%), Positives = 207/369 (56%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSL 105
CA+A+S ++L A+ M+ ++ Q+ + G QR+ AY E + A+L SS IY AL
Sbjct: 126 CAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRC 185
Query: 106 PQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLF 165
P+ + +++S + + P+ KF + +AN AI EA + E+RVHIID I QG QW L
Sbjct: 186 PEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLI 245
Query: 166 HILASRPGGPPYVRLTGLG--TSMEA----LEATGKRLSDFAEKLGLPFEFCPVAEKVGN 219
A+RPGGPP +R+TG+ TS A L G RL+ A++ +PFEF V+ V
Sbjct: 246 QAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSE 305
Query: 220 LDPERLNISKREAVAVHW--LQHSLYDVTGSDTN----TLCLLQRLAPKVVTVVEQDLSP 273
+ P+ L + EA+AV++ + H + D + S N L +++ L+PKVVT+VEQ+ +
Sbjct: 306 VKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNT 365
Query: 274 -AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGD 332
+F RF+E ++YY+A+F+S+ + + ++R VEQ L+R++ N++A G R
Sbjct: 366 NTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADR--- 422
Query: 333 VKFHN----WREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDL 388
V+ H WR + +GF L+ + LL + D Y L E +G L LGW
Sbjct: 423 VERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRLEERDGALYLGWMHR 481
Query: 389 CLLTASAWR 397
L+ + AW+
Sbjct: 482 DLVASCAWK 490
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 132/367 (35%), Positives = 198/367 (53%)
Query: 45 QCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPS 104
+CA+AV +LE + ++ ++ Q+ + G QR+ AY E + ARL SS IY AL
Sbjct: 233 ECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRC 292
Query: 105 LPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGL 164
T + +++ + P+ KF + +AN AI EA + E VHIID I QG QW L
Sbjct: 293 KDPTGPE-LLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSL 351
Query: 165 FHILASRPGGPPYVRLTGLGTSMEA------LEATGKRLSDFAEKLGLPFEFCPVAEKVG 218
L +RPGGPP VR+TG+ + LE G+RL AE G+PFEF A
Sbjct: 352 IRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCT 411
Query: 219 NLDPERLNISKREAVAVHW--LQHSLYDVTGSDTN----TLCLLQRLAPKVVTVVEQDLS 272
++ E+L + EA+AV++ + H + D + + N L L++ L+P VVT+VEQ+ +
Sbjct: 412 EVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEAN 471
Query: 273 P-AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSG 331
FL RFVE +++Y A+F+S+ + +ER VEQ L+RE+ N++A G R
Sbjct: 472 TNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREE 531
Query: 332 DVK-FHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCL 390
+ WR + +GFK L+ LL + + YTL E +G L LGWK+ L
Sbjct: 532 RHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS-EKYTLEERDGALYLGWKNQPL 590
Query: 391 LTASAWR 397
+T+ AWR
Sbjct: 591 ITSCAWR 597
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 124/360 (34%), Positives = 197/360 (54%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSL 105
CA+AVS +NL A + E+ + + G QR+ AY E + ARL +S IY +L S
Sbjct: 57 CAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSR 116
Query: 106 PQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLF 165
+ + + +S V + + P+ KF + +AN AI EA + E+R+HIID I QG QW L
Sbjct: 117 -EPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALI 175
Query: 166 HILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225
A+RPGG P +R+TG+G L KRL A+K +PF F V+ ++ E L
Sbjct: 176 QAFAARPGGAPNIRITGVGDG-SVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENL 234
Query: 226 NISKREAVAVH--WLQHSLYDVTGSDTN----TLCLLQRLAPKVVTVVEQDLSPAGS-FL 278
++ EA+ V+ ++ H L D + S N L +++ L+PKVVT+VEQ+ + S FL
Sbjct: 235 DVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFL 294
Query: 279 GRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSR-SGDVKFHN 337
RF+E + YY+A+F+S+ +ER +EQ ++R++ N++A G R
Sbjct: 295 PRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGK 354
Query: 338 WREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR 397
W+ + +GF+ L+ + LL + +GY + E +G L LGW D L+++ AW+
Sbjct: 355 WKSRFSMAGFEPYPLSSIISATIRALLRDYS-NGYAIEERDGALYLGWMDRILVSSCAWK 413
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 125/349 (35%), Positives = 191/349 (54%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYG-TSAQRVAAYFSEAMSARLVSSCLGIYAALP- 103
C +A+ + N+ N + L++P G T R+ AY+ EA++ R+ I+ P
Sbjct: 281 CLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPP 340
Query: 104 -SLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWP 162
+T + +A + N ++P KF HFTAN+ + AFE ++RVHIID DI QGLQWP
Sbjct: 341 REFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWP 400
Query: 163 GLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDP 222
F LASR P +VR+TG+G S L TG RL FAE + L FEF PV +++ ++
Sbjct: 401 SFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRL 460
Query: 223 ERLNISKREAVAVHWLQ--H-SLYDVTGSDTNT-LCLLQRLAPKVVTVVEQDLSPAGSFL 278
L++ + E+VAV+ + H +LYD TG+ L L++ P + + EQ+ L
Sbjct: 461 WMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQL 520
Query: 279 G-RFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSG-DVKFH 336
R ++ YYSA+FD++ + +S R VE+ L REIRN++A G R V F
Sbjct: 521 ETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFR 580
Query: 337 NWREKLQRSGFKGISLAGNAATQATLLLGMFPCD--GYTLVE----DNG 379
+WR L++ GF+ + ++ Q+ +LL M+ D G+ VE DNG
Sbjct: 581 HWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDEDNG 629
Score = 191 (72.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 238 LQHSLYDVTGSDTNT-LCLLQRLAPKVVTVVEQDLSPAGSFLG-RFVEAIHYYSALFDSL 295
+ +LYD TG+ L L++ P + + EQ+ L R ++ YYSA+FD++
Sbjct: 479 MHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAI 538
Query: 296 GASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSG-DVKFHNWREKLQRSGFKGISLAG 354
+ +S R VE+ L REIRN++A G R V F +WR L++ GF+ + ++
Sbjct: 539 HTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSE 598
Query: 355 NAATQATLLLGMFPCD--GYTLVE----DNGT-------LKLGWKDLCLLTASAW 396
Q+ +LL M+ D G+ VE DNG + L W + L T SAW
Sbjct: 599 REVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 132/366 (36%), Positives = 194/366 (53%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSL 105
CA A+S LEEA M+ E+ Q+ + G +QR+AAY E ++AR+ +S IY AL
Sbjct: 229 CARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRAL-KC 287
Query: 106 PQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLF 165
+ + + ++A QV + P KF AN AI EA + E+ VHIID DI QG Q+ L
Sbjct: 288 KEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLI 347
Query: 166 HILASRPGGPPYVRLTGLGT------SMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGN 219
+A PG P +RLTG+ S+ L G RL AE G+ F+F + K
Sbjct: 348 RSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSI 407
Query: 220 LDPERLNISKREAVAVHW-LQ-HSLYDVTGSDTNT----LCLLQRLAPKVVTVVEQDLSP 273
+ P L E + V++ Q H + D + + N L +++ L PK+VTVVEQD++
Sbjct: 408 VSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNT 467
Query: 274 AGS-FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGD 332
S F RF+EA YYSA+F+SL + ES+ER VE+Q L+R+I N++A G R
Sbjct: 468 NTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIER 527
Query: 333 VKFHN-WREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLL 391
+ WR ++ +GF ++ L+ C+ Y L E+ G L W++ L+
Sbjct: 528 YEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLI 587
Query: 392 TASAWR 397
ASAWR
Sbjct: 588 VASAWR 593
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 465 (168.7 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 129/402 (32%), Positives = 199/402 (49%)
Query: 18 ASIREKKEEIRQQKRD--EEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTS 75
A IR KK D +E CA+AVS D+ AN+ML +I + S+P G
Sbjct: 370 AKIRGKKSTSTSHSNDSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNG 429
Query: 76 AQRVAAYFSEAMSARLVSSCLGIYAALPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTAN 135
++R+A YF+ ++ ARL + IY AL S +T M+ A+Q + + PF K + AN
Sbjct: 430 SERLAHYFANSLEARLAGTGTQIYTALSS-KKTSAADMLKAYQTYMSVCPFKKAAIIFAN 488
Query: 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILA-SRPGGPPYVRLTGLGTSM------E 188
++ + +HIID I G QWP L H L+ SRPGG P +R+TG+ E
Sbjct: 489 HSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAE 548
Query: 189 ALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQH--SLYDVT 246
++ TG RL+ + ++ +PFE+ +A+K + E L + + E V V+ L +L D T
Sbjct: 549 GVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDET 608
Query: 247 ---GSDTNT-LCLLQRLAPKV-VTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLGASYGE 301
S + L L++++ P V + + A F+ RF EA+ +YSA+FD +
Sbjct: 609 VLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAR 668
Query: 302 ESEERHVVEQQLLSREIRNVLAVGGPSR-SGDVKFHNWREKLQRSGFKGISLAGNAATQA 360
E E R + E++ REI NV+A G R + W+ +L R+GF+ + L
Sbjct: 669 EDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNL 728
Query: 361 TLLLGMFPCDGYTL---VEDNGTLKL-GWKDLCLLTASAWRP 398
L + +GY V+ NG L GWK + +S W P
Sbjct: 729 KLKIE----NGYDKNFDVDQNGNWLLQGWKGRIVYASSLWVP 766
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 379 (138.5 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 100/268 (37%), Positives = 150/268 (55%)
Query: 148 VHIIDLDIMQGLQWPGLFHILASR---PGGPP-YVRLTGLGTSMEALEATGKRLSDFAEK 203
+HI+DLDI QGLQWP L LA R P PP +R+TG G + L TG RL+ FA+
Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTGLNRTGDRLTRFADS 238
Query: 204 LGLPFEF--CPVAEK--VGNLDPERL---NISKREAVAV---HWLQHSLYDVTGSDT-NT 252
LGL F+F + E+ G L RL + + E +AV H+L H +++ G +
Sbjct: 239 LGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFL-HKIFNDDGDMIGHF 297
Query: 253 LCLLQRLAPKVVTVVEQDLSPAG-SFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQ 311
L ++ L ++VT+ E++ + SFL RF EA+ +Y A+FDSL A+ S ER +EQ
Sbjct: 298 LSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQ 357
Query: 312 QLLSREIRNVLAVGGPSRSG-DVKFHNWREKLQRSGFKGISLAGNAATQATLLLGM-FPC 369
+ +EI +V+A R +F W E ++R GF + + A +QA LLL + +P
Sbjct: 358 RWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPS 417
Query: 370 DGYTLVEDNGTLKLGWKDLCLLTASAWR 397
+GY L N +L LGW++ L + S+W+
Sbjct: 418 EGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 247 (92.0 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 66/167 (39%), Positives = 96/167 (57%)
Query: 121 NGISPFVKFSHFTANQAIQEAFEREDR--VHIIDLDIMQGLQWPGLFHILASR---PGGP 175
N ++PF++F H TANQAI +A E D +HI+DLDI QGLQWP L LA R P P
Sbjct: 150 NQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSP 209
Query: 176 P-YVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEF--CPVAEK--VGNLDPERL---NI 227
P +R+TG G + L TG RL+ FA+ LGL F+F + E+ G L RL +
Sbjct: 210 PPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSA 269
Query: 228 SKREAVAV---HWLQHSLYDVTGSDT-NTLCLLQRLAPKVVTVVEQD 270
+ E +AV H+L H +++ G + L ++ L ++VT+ E++
Sbjct: 270 VQGETIAVNCVHFL-HKIFNDDGDMIGHFLSAIKSLNSRIVTMAERE 315
Score = 72 (30.4 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 47 AEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARL 91
A VS N A +L +S S+P+G S +R+ F++A+S R+
Sbjct: 49 ANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 111/381 (29%), Positives = 190/381 (49%)
Query: 45 QCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLG-IYAALP 103
QCA+AV++ + A L EI S+ G QR+A YF+EA+ AR+ + + P
Sbjct: 230 QCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFP 289
Query: 104 SLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPG 163
S T ++ A+++F P +F AN++I E + ++HI+D ++ G QWP
Sbjct: 290 S-STTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPC 348
Query: 164 LFHILASRPGGPPYVRLTGLGTSM------EALEATGKRLSDFAEKLGLPFEFCPVAEKV 217
L L+ RPGGPP +R+TG+ + +E TG+RL F ++ +PFEF +A+K
Sbjct: 349 LLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKW 408
Query: 218 GNLDPERLNISKREAVAV---HWLQHSLYDVTGSDT---NTLCLLQRLAPKVVTVVE-QD 270
+ + L I+ E V H LQ++ + D+ L L + + P + E
Sbjct: 409 ETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEING 468
Query: 271 LSPAGSFLGRFVEAIHYYSALFDSLGASYGEESE--ERHVVEQQLLSREIRNVLAVGGPS 328
+ + F+ RF EA+ +YS+LFD + E E R ++E++LL R+ +V++ G
Sbjct: 469 MYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAE 528
Query: 329 RSGDVK-FHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKD 387
R + + WR ++ R+GFK +++ +A ++ + + DN + GWK
Sbjct: 529 RFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKG 588
Query: 388 LCLLTASAWRPLIHHPCNNIN 408
+ S W+P NN+N
Sbjct: 589 RVIYAFSCWKPAEKFTNNNLN 609
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 279 (103.3 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 63/172 (36%), Positives = 96/172 (55%)
Query: 46 CAEAVSADNLEEANKML-LEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPS 104
CA+ + +L A + + ++ ++P G +A R+A +F+ A++ R+ + + +
Sbjct: 57 CADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGG 116
Query: 105 LPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGL 164
A+ FN I+PF++F+H TANQAI EA + RVHI+DLD + G+QWP L
Sbjct: 117 GAARPASS--GAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPL 174
Query: 165 FHILASR--PG-GPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPV 213
+A R P GPP VR+TG G + L TG RL FA + LPF F P+
Sbjct: 175 LQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPL 226
Score = 196 (74.1 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 61/179 (34%), Positives = 94/179 (52%)
Query: 231 EAVAVHWLQHSLYDVTGSDTNTLCL--LQRLAPKVVTVVEQDLSPAGSF------LGRFV 282
E +AV+ + L+++ G D L ++ ++P VVT+ E++ G L R V
Sbjct: 264 ETLAVNCVMF-LHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRV 322
Query: 283 E-AIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVK-FHNWRE 340
A+ +YSA+F++L A+ S ER VEQ++L REI A GPS + W
Sbjct: 323 GVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIE---AAVGPSGGRWWRGIERWGG 379
Query: 341 KLQRSGFKGISLAGNAATQATLLLGM-FPCDGYTLVEDNGTLKLGWKDLCLLTASAWRP 398
+ +GF L+ A +QA LLL + +P +GY + E G LGW+ LL+ SAW+P
Sbjct: 380 AARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSVSAWQP 438
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 428 (155.7 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 114/367 (31%), Positives = 183/367 (49%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSL 105
CA+AV+AD+ A ++L +I STP+G QR+A F+ + ARL + IY + S
Sbjct: 351 CAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSK 410
Query: 106 PQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLF 165
P++ ++ A Q+F PF K S+F N+ I++ RVH+ID I+ G QWP L
Sbjct: 411 PRS-AAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLI 469
Query: 166 HILASRPGGPPYVRLTGL-----G-TSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGN 219
H + G P VR+TG+ G + +E TG+RL+ +A+ G+PFE+ +A+K
Sbjct: 470 HRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDA 527
Query: 220 LDPERLNISKREAVAVHWLQHS--LYD----VTGSDTNTLCLLQRLAPKV-VTVVEQDLS 272
+ E L+I + E V+ L + L+D V L L+ ++ P + V +
Sbjct: 528 IQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAY 587
Query: 273 PAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSR-SG 331
A F+ RF EA+ ++S++FD L E EER +E ++ RE NV+A G R
Sbjct: 588 NAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVER 647
Query: 332 DVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLL 391
+ W + RSG + + + + F + + +DN L GWK ++
Sbjct: 648 PETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVM 707
Query: 392 TASAWRP 398
S W+P
Sbjct: 708 ALSVWKP 714
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 120/388 (30%), Positives = 197/388 (50%)
Query: 29 QQKRDE-EGXXXXXXXXQCAEA-VSADNLEEANKMLL-EISQLSTPYG-TSAQRVAAYFS 84
+ K DE +G A+A A+ E +++L + L +P T+ +R+AA+F+
Sbjct: 93 EPKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFT 152
Query: 85 EAMSARLVSSCLGIYAALPSLPQTHTQK-MVSAFQVFNGISPFVKFSHFTANQAIQEAFE 143
+S L + + Q ++SAF++ +SP+V F + TA QAI EA +
Sbjct: 153 NGLSKLLERD--SVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVK 210
Query: 144 REDRVHIIDLDIMQGLQWPGLFHILASRPGGPP--YVRLTGLGT------SMEALEATGK 195
E R+HI+D DI +G+QW L L SR GP ++R+T L S+ A++ TG+
Sbjct: 211 YERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGR 270
Query: 196 RLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQHS---LYDVTGSDTNT 252
RL+ FA+ +G PF + L + + EAV ++ + H + S +
Sbjct: 271 RLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVISF 330
Query: 253 LCLLQRLAPKVVTVVEQDLSPAGS--FLGRFVEAIHYYSALFDSLGASYGEESEERHVVE 310
L + L PK+VT+V +++ G+ FL RF++ +H +SA+FDSL A + R VE
Sbjct: 331 LSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVE 390
Query: 311 QQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCD 370
+ + + N L + + F +W + L+ +GFK + ++ QA LLL +F D
Sbjct: 391 RVFIGPWVANWLTRITANDAEVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFN-D 449
Query: 371 GYTLVE--DNGTLKLGWKDLCLLTASAW 396
G+ + E NG L LGWK L++AS W
Sbjct: 450 GFRVEELGQNG-LVLGWKSRRLVSASFW 476
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 403 (146.9 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 113/394 (28%), Positives = 190/394 (48%)
Query: 20 IREKKEEIRQQKRDEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRV 79
++ +QQK D+ QCA+AV++ + A + L EI + S+ +G + QR+
Sbjct: 191 VKGSSNRYKQQKSDQP-VDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRL 249
Query: 80 AAYFSEAMSARLVSSCLGIYAALPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQ 139
+F+EA+ AR+ + +A S +T ++ A++ F P + +FTAN+ I
Sbjct: 250 GYHFAEALEARITGTMTTPISATSS--RTSMVDILKAYKGFVQACPTLIMCYFTANRTIN 307
Query: 140 EAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSM------EALEAT 193
E + +HIID I+ G QWP L L+ R GPP +R+TG+ E +E T
Sbjct: 308 ELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEET 367
Query: 194 GKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQHSLY--DVTGS--- 248
G+RL F +K +PFE+ +A+ N+ + L I+ E V+ + Y D T S
Sbjct: 368 GRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNS 427
Query: 249 --DTNTLCLLQRLAPKVVTVVE-QDLSPAGSFLGRFVEAIHYYSALFDSLGASYGEESEE 305
DT L L + + P + E + FL RF EA+ + S+LFD + E+
Sbjct: 428 PRDT-ALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNC 486
Query: 306 RHVVEQQLLSREIRNVLAVGGPSRSGDVK-FHNWREKLQRSGFKGISLAGNAATQATLLL 364
R +VE++L+ R+ +V+A G R + + W+ ++ R+GF+ L+ ++
Sbjct: 487 RTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIV 546
Query: 365 GMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWRP 398
+ + DN + GWK L S W+P
Sbjct: 547 KERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKP 580
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 360 (131.8 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 101/325 (31%), Positives = 171/325 (52%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSC----LGIYAA 101
CA++VSA + A+ +L +I + +P G ++QR+A +F+ A+ ARL S Y +
Sbjct: 322 CAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDS 381
Query: 102 LPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQW 161
+ S +T Q ++ ++ VF SPF+ +F +N+ I +A + +HI+D I+ G QW
Sbjct: 382 ISSKKRTAAQ-ILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQW 440
Query: 162 PGLF-HILASRPGGPPYVRLTGLGTSM------EALEATGKRLSDFAEKLGLPFEFCPVA 214
P H+ S PG +R+TG+ E ++ TG+RL+++ ++ G+PFE+ +A
Sbjct: 441 PMFIQHLSKSNPGLRK-LRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIA 499
Query: 215 EKVGN-LDPERLNISKREAVAVHWLQH--SLYDVTGSDTNT-----LCLLQRLAPKVV-- 264
K + E I E +AV+ + +L DV + + L L++ + P V
Sbjct: 500 SKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLS 559
Query: 265 TVVEQDLSPAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAV 324
+ V + A F RF EA+ +YSALFD GA+ +E+ ER E + RE+ NV+A
Sbjct: 560 STVNGSFN-APFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIAC 618
Query: 325 GGPSR-SGDVKFHNWREKLQRSGFK 348
G R + W+ ++ R+GFK
Sbjct: 619 EGVDRVERPETYKQWQVRMIRAGFK 643
Score = 211 (79.3 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 65/224 (29%), Positives = 109/224 (48%)
Query: 188 EALEATGKRLSDFAEKLGLPFEFCPVAEKVGN-LDPERLNISKREAVAVHWLQH--SLYD 244
E ++ TG+RL+++ ++ G+PFE+ +A K + E I E +AV+ + +L D
Sbjct: 473 ERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRD 532
Query: 245 VTGSDTNT-----LCLLQRLAPKVV--TVVEQDLSPAGSFLGRFVEAIHYYSALFDSLGA 297
V + + L L++ + P V + V + A F RF EA+ +YSALFD GA
Sbjct: 533 VIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFN-APFFTTRFKEALFHYSALFDLFGA 591
Query: 298 SYGEESEERHVVEQQLLSREIRNVLAVGGPSR-SGDVKFHNWREKLQRSGFKGISLAGNA 356
+ +E+ ER E + RE+ NV+A G R + W+ ++ R+GFK +
Sbjct: 592 TLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAEL 651
Query: 357 AT--QATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWRP 398
+ + + D + L ED+ GWK L ++S W P
Sbjct: 652 VQLFREKMKKWGYHKD-FVLDEDSNWFLQGWKGRILFSSSCWVP 694
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 352 (129.0 bits), Expect = 7.1e-32, P = 7.1e-32
Identities = 97/294 (32%), Positives = 150/294 (51%)
Query: 62 LLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSLPQTHT-QKMVSAFQVF 120
L+ I + + G QRV YF+EA+S + S PS + + + + +++
Sbjct: 195 LIRIKESVSESGDPIQRVGYYFAEALSHKETES--------PSSSSSSSLEDFILSYKTL 246
Query: 121 NGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPY-VR 179
N P+ KF+H TANQAI EA + + +HI+D I QG+QW L LA+R G P +R
Sbjct: 247 NDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIR 306
Query: 180 LTG-----LGTSM-EALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAV 233
++G LG S +L ATG RL DFA L L FEF PV + L+ + E +
Sbjct: 307 ISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVL 366
Query: 234 AVHWLQ--HSLYDVTGSDTNTLCLLQR-LAPKVVTVVEQDLS-PAGSFLGRFVEAIHYYS 289
V+++ + L D T + T L R L P++VT+ E ++S F R ++ +YS
Sbjct: 367 VVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYS 426
Query: 290 ALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQ 343
A+F+SL + +S+ER VE+ L R I +++ + +F EK Q
Sbjct: 427 AVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQ 480
Score = 258 (95.9 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 74/228 (32%), Positives = 117/228 (51%)
Query: 183 LGTSM-EALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNISKREAVAVHWLQ-- 239
LG S +L ATG RL DFA L L FEF PV + L+ + E + V+++
Sbjct: 315 LGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLEL 374
Query: 240 HSLYDVTGSDTNTLCLLQR-LAPKVVTVVEQDLS-PAGSFLGRFVEAIHYYSALFDSLGA 297
+ L D T + T L R L P++VT+ E ++S F R ++ +YSA+F+SL
Sbjct: 375 YKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEP 434
Query: 298 SYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKF------HNWREKLQRSGFKGIS 351
+ +S+ER VE+ L R I +++ + +F WR ++++GF+ +
Sbjct: 435 NLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVK 494
Query: 352 LAGNAATQATLLLGMFPCDG-YTLVEDN-GTLKLGWKDLCLLTASAWR 397
+ A +QA LLL + Y+LVE G + L W ++ LLT S+WR
Sbjct: 495 PSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 307 (113.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 103/377 (27%), Positives = 177/377 (46%)
Query: 33 DEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQ-LSTPYGTSAQRVAAYFSEAMSARL 91
D G + + V +D L+ A +L ++Q L +P G QR A YF EA+ + L
Sbjct: 116 DNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFL 175
Query: 92 VSSCLGIYAALPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDR---V 148
S L S + Q+ + A + ++GISP FSHFTANQAI ++ + V
Sbjct: 176 TGSNRNPIR-LSSWSEI-VQR-IRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFV 232
Query: 149 HIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEA--TGKRLSDFAEKLGL 206
H++D +I G Q+ L + + ++R+T + A+E + L+ FA ++ +
Sbjct: 233 HVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVVAEECAVETRLVKENLTQFAAEMKI 292
Query: 207 PFEFCPVAEKVGN-LDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVT 265
F+ V K L + + + E V + +++ T+ + L+R++PKVV
Sbjct: 293 RFQIEFVLMKTFEMLSFKAIRFVEGERTVV-LISPAIFRRLSGITDFVNNLRRVSPKVVV 351
Query: 266 VVEQD----LSPAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNV 321
V+ + ++ +GSF FV A+ +Y+ + +SL A+ + +VE +L +I
Sbjct: 352 FVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAA 411
Query: 322 LAVGGPSR-SGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGT 380
+ R +G++ WRE +G + I L+ A QA LL G+ + + G
Sbjct: 412 VETAADRRHTGEM---TWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGE 468
Query: 381 LKLGWKDLCLLTASAWR 397
L L W L+ SAWR
Sbjct: 469 LVLCWHGRALVATSAWR 485
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 293 (108.2 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 101/376 (26%), Positives = 168/376 (44%)
Query: 33 DEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQ-LSTPYGTSAQRVAAYFSEAMSARL 91
D G + + + +D L A+ +L +++Q L T G QR A YF EA+ + L
Sbjct: 93 DNGGFDYIEDLIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLL 152
Query: 92 VSSCLGIYAALPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDR---V 148
+ + + QK + A + F+GISP FSHFTANQAI ++ + V
Sbjct: 153 TGTNRNQLFSWSDI----VQK-IRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFV 207
Query: 149 HIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEA--TGKRLSDFAEKLGL 206
H++D +I G Q+ L +A + ++R+T + A+E + L+ FA ++ +
Sbjct: 208 HVVDFEIGFGGQYASLMREIAEKSANGGFLRVTAVVAEDCAVETRLVKENLTQFAAEMKI 267
Query: 207 PFEFCPVAEKVGN-LDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVT 265
F+ V K L + + E V + +++ + L R++P VV
Sbjct: 268 RFQIEFVLMKTFEILSFKAIRFVDGERTVV-LISPAIFRRVIGIAEFVNNLGRVSPNVVV 326
Query: 266 VVEQD----LSPAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNV 321
V+ + + +GSF FV A +Y+ + +SL A+ + +VE LL +I
Sbjct: 327 FVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAA 386
Query: 322 LAVGGPSRSGDVKFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTL 381
+ RS WRE L +G + + L+ A QA LL G+ + + G L
Sbjct: 387 VETAANRRSAGQM--TWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGEL 444
Query: 382 KLGWKDLCLLTASAWR 397
L W L+ SAWR
Sbjct: 445 VLCWHGRALVATSAWR 460
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 298 (110.0 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 104/339 (30%), Positives = 173/339 (51%)
Query: 78 RVAAYFSEAMSARLVSSCLGIYAALPSL-PQTHTQKMVSAFQVFNGISPFVKFSHFTANQ 136
R A+Y +EA+ + L S L + PSL P + ++A++ F+ SPF++F +FTANQ
Sbjct: 294 RAASYITEALHSLLQDSSL----SPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQ 349
Query: 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILA---SRPGGPPYVRLTGLGT----SME- 188
I E+FE DR+HI+D DI G QW L LA +R P +++T + S E
Sbjct: 350 TILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEF 409
Query: 189 ALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPER--LNI---SKREAVAVHWLQHSLY 243
L T + L FA + G+ FE + ++ L+P L++ S++EA+AV+ S+
Sbjct: 410 ELRFTEENLRSFAGETGVSFEIELLNMEI-LLNPTYWPLSLFRSSEKEAIAVNLPISSM- 467
Query: 244 DVTGSDTNTLCLLQRLAPKVVTVVEQ--DLSPAGSFLGRFVEAIHYYSALFDSLGASYGE 301
V+G L L++++P VV ++ D + F + A+ YY++L +SL +
Sbjct: 468 -VSGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLN 526
Query: 302 ESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISLAGNAATQAT 361
+E +E+ + I+ +L R + + WR + GF ++L+ A TQA
Sbjct: 527 NAEAATSIERFCVQPSIQKLLT--NRYRWME-RSPPWRSLFGQCGFTPVTLSQTAETQAE 583
Query: 362 LLLGMFPCDGYTLVE---DNGTLKLGWKDLCLLTASAWR 397
LL P G+ L + + +L L W+ L+T SAW+
Sbjct: 584 YLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 232 (86.7 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 73/220 (33%), Positives = 112/220 (50%)
Query: 188 EALEATGKRLSDFAEKLGLPFEFCPVAE-KVGNLDPERLNISKREAVAVHWLQHSLYDVT 246
E L+A G LS ++LG+ F V ++G+L+ E L E +AV+ L LY V
Sbjct: 424 ERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVN-LAFKLYRVP 482
Query: 247 GSDTNTLC----LLQR---LAPKVVTVVEQDL-SPAGSFLGRFVEAIHYYSALFDSLGAS 298
T LL+R L P+VVT+VEQ++ S FLGR E+ Y AL +S+ ++
Sbjct: 483 DESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVEST 542
Query: 299 YGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVK-FHNWREKLQRSGFKGISLAGNAA 357
+ +R VE+ + R++ N +A G R + F WR ++ +GF+ + L+ A
Sbjct: 543 VPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIA 601
Query: 358 TQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR 397
++ G G+T+ EDNG + GW L ASAWR
Sbjct: 602 -ESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
Score = 120 (47.3 bits), Expect = 8.8e-25, Sum P(2) = 8.8e-25
Identities = 47/186 (25%), Positives = 82/186 (44%)
Query: 45 QCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPS 104
+ A A++ E A ++L +SQ S +++ + A+ +R+ S +Y
Sbjct: 271 EIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELYG---- 326
Query: 105 LPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDR----VHIIDLDIMQGLQ 160
+ H ++S Q+ +SP K AN AI +A + D H+ID DI +G Q
Sbjct: 327 --KEH---LIST-QLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQ 380
Query: 161 WPGLFHILASRPGGP------PYVRLTGLGTSM----------EALEATGKRLSDFAEKL 204
+ L L++R G P V++T + ++ E L+A G LS ++L
Sbjct: 381 YVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRL 440
Query: 205 GLPFEF 210
G+ F
Sbjct: 441 GISVSF 446
Score = 41 (19.5 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 102 LPSLPQTHTQKMVSAFQVFNGI 123
LP +P++ TQ+ S + +F GI
Sbjct: 139 LP-VPRSQTQQQQSDYGLFGGI 159
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 282 (104.3 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 98/364 (26%), Positives = 177/364 (48%)
Query: 45 QCAEAVSADNLEEANKMLLEISQ-LSTPYGTSAQRVAAYFSEAMSARL--VSSCLGIYAA 101
+ AE + +D A +L ++Q LS+P G +R A YF EA++ L VS L Y+
Sbjct: 211 KAAEVIESDTCL-AQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQTLNPYSL 269
Query: 102 LPSLPQTHTQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQW 161
+ ++A++ F+ ISP ++F++FT+NQA+ E+F R+HIID DI G QW
Sbjct: 270 IFK---------IAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQW 320
Query: 162 PGLFHILASRPGGPPY-VRLTGLGT--SMEALEA--TGKRLSDFAEKLGLPFEFCPVA-E 215
L L R P +++T + + + LE T L FA ++ + + ++ +
Sbjct: 321 ASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEINISLDIQVLSLD 380
Query: 216 KVGNLD-PERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQDLSPA 274
+G++ P N S++EAVAV+ S + L ++ L+P ++ ++
Sbjct: 381 LLGSISWP---NSSEKEAVAVNISAASFSHLP----LVLRFVKHLSPTIIVCSDRGCERT 433
Query: 275 G-SFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDV 333
F + ++H ++ALF+SL A + +E+ L+ EI ++ SR +
Sbjct: 434 DLPFSQQLAHSLHSHTALFESLDA-VNANLDAMQKIERFLIQPEIEKLVL--DRSRPIER 490
Query: 334 KFHNWREKLQRSGFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTA 393
W+ + GF ++ + +QA L+ P G+ + + + +L L W+ L+
Sbjct: 491 PMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGV 550
Query: 394 SAWR 397
SAWR
Sbjct: 551 SAWR 554
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 280 (103.6 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 104/405 (25%), Positives = 177/405 (43%)
Query: 16 VNASIREKKEEIRQQKR-----DEEGXXXXXXXXQCAEAVSADNLEEANKMLLEISQLST 70
V S R K++ I+ ++ ++EG CA A++A N L +S+L++
Sbjct: 117 VKKSARSKRKAIKSSEKSSKDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELAS 176
Query: 71 PYGTSAQRVAAYFSEAMSARLVSSCLGI-YAALPSLPQTHTQKMVSAFQVFNGISPFVKF 129
G + +R+AA+ A+ L SS + + + + + F +SP+
Sbjct: 177 SSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVSPWFAL 236
Query: 130 SHFTANQAIQE--AFEREDR--VHIIDLDIMQGLQWPGLFHILASR-PGGPPYVRLTGLG 184
+ AN AI + A + +D+ +HIID+ + G+QWP L L+ R G PP VR+T +
Sbjct: 237 PNNMANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVIS 296
Query: 185 TSMEALEAT--------GKRLSDFAEKLGLPFEFCPVAEKVGNLDPE-RLNISKREAVAV 235
+ + G +L FA L + + V +K+ +D N+ +
Sbjct: 297 DLTADIPFSVGPPGYNYGSQLLGFARSLKINLQIS-VLDKLQLIDTSPHENLIVCAQFRL 355
Query: 236 HWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQ--DLSPAGSFLGRFVEAIHYYSALFD 293
H L+HS+ D G TL ++ L PK V + E + S + F F + + Y D
Sbjct: 356 HHLKHSINDERGE---TLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLD 412
Query: 294 SLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISLA 353
S + + EE+ E E++L+ E VL G G K W E+++ +GF +
Sbjct: 413 STSSGFKEENSE----ERKLMEGEATKVLMNAGDMNEGKEK---WYERMREAGFFVEAFE 465
Query: 354 GNAATQATLLLGMFPCDGYTLVEDNGTLK-LGWKDLCLLTASAWR 397
+A A LL + + +ED T L WK + S W+
Sbjct: 466 EDAVDGAKSLLRKYDNNWEIRMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 275 (101.9 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 79/260 (30%), Positives = 130/260 (50%)
Query: 45 QCAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPS 104
+ A A S + A ++L +++LS+PYG + Q++A+YF +A+ R+ S Y + +
Sbjct: 149 EAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVT 208
Query: 105 LPQTH-------TQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQ 157
T T+K V FQ +SP+ F H AN AI EA + E ++HI+D+
Sbjct: 209 AAATEKTCSFESTRKTVLKFQE---VSPWATFGHVAANGAILEAVDGEAKIHIVDISSTF 265
Query: 158 GLQWPGLFHILASRPGGPPYVRLTGL----------GTSMEALEATGKRLSDFAEKLGLP 207
QWP L LA+R P++RLT + S ++ G R+ FA +G+P
Sbjct: 266 CTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVP 325
Query: 208 FEFCPVAEKVGNL---DPERLNISKREAVAVHWL--QHSLYDVTGSDTNT-LCLLQRLAP 261
F+F + VG+L D L++ E +A++ + H + GS + + +RL P
Sbjct: 326 FKF-NIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIAS-RGSPRDAVISSFRRLRP 383
Query: 262 KVVTVVEQDLSPAGSFLGRF 281
++VTVVE++ G G F
Sbjct: 384 RIVTVVEEEADLVGEEEGGF 403
Score = 195 (73.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 63/231 (27%), Positives = 112/231 (48%)
Query: 186 SMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNL---DPERLNISKREAVAVHWL--QH 240
S ++ G R+ FA +G+PF+F + VG+L D L++ E +A++ + H
Sbjct: 304 SHRMMKEIGNRMEKFARLMGVPFKF-NIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMH 362
Query: 241 SLYDVTGSDTNT-LCLLQRLAPKVVTVVEQDLSPAGS--------FLGRFVEAIHYYSAL 291
+ GS + + +RL P++VTVVE++ G FL F E + ++
Sbjct: 363 GIAS-RGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVC 421
Query: 292 FDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVK--FHNWREKLQRSGFKG 349
F+S S+ S ER ++E+ R I +++A PS S + + W +++ SGF
Sbjct: 422 FESWEESFPRTSNERLMLERAA-GRAIVDLVACE-PSDSTERRETARKWSRRMRNSGFGA 479
Query: 350 ISLAGNAATQATLLLGMFPCDGYTLVE--DNGTLKLGWKDLCLLTASAWRP 398
+ + A LL + +++V+ D + L W+D ++ ASAWRP
Sbjct: 480 VGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 253 (94.1 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 100/352 (28%), Positives = 175/352 (49%)
Query: 69 STPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSLPQTHTQKMVSAFQVFNGISPFVK 128
S+ + + QR A++ +EA+ + + + ++ P + + ++A++ F+ SPF++
Sbjct: 307 SSNHKSPFQRAASHIAEALLSLIHNE-----SSPPLITPENLILRIAAYRSFSETSPFLQ 361
Query: 129 FSHFTANQAIQEAFERE--DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTS 186
F +FTANQ+I E+ DR+HIID D+ G QW L LAS GG R + L +
Sbjct: 362 FVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLT 421
Query: 187 MEA-----------LEATGKRLSDFAEKLGLPFEFCPVA-EKVGNLD--PERLNISKREA 232
+ A L T + L FA ++ +PFE ++ E + N P L S++EA
Sbjct: 422 VFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEA 481
Query: 233 VAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQ--DLSPAGSFLGRFVEAIHYYSA 290
+AV+ +S+ +G L L++L+P +V ++ D + A F + ++ Y+++
Sbjct: 482 IAVNLPVNSV--ASGYLPLILRFLKQLSPNIVVCSDRGCDRNDA-PFPNAVIHSLQYHTS 538
Query: 291 LFDSLGASYGEE--SEERHVVE---QQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRS 345
L +SL A+ ++ S ER V+ ++LL + R + RS WR +
Sbjct: 539 LLESLDANQNQDDSSIERFWVQPSIEKLLMKRHRWI------ERSPP-----WRILFTQC 587
Query: 346 GFKGISLAGNAATQATLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWR 397
GF SL+ A QA LL P G+ + + +L + W+ L+T SAW+
Sbjct: 588 GFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWK 639
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 50/175 (28%), Positives = 86/175 (49%)
Query: 46 CAEAVSADNLEEANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSL 105
CA A+ +++ +++L ++ ++ P G S QR+ + F A+ +R VS + + + L
Sbjct: 34 CATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFL 93
Query: 106 PQTHTQKMVSAFQV--FNGISPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPG 163
PQ S ++ F ++P+ +F AN AI A E VHI+DL + +Q P
Sbjct: 94 PQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPT 153
Query: 164 LFHILASRPGGPP-YVRLTGLGTSME-------ALEATGKRLSDFAEKLGLPFEF 210
L +ASR PP ++LT + +S + E G +L +FA + EF
Sbjct: 154 LIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEF 208
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 62/250 (24%), Positives = 115/250 (46%)
Query: 167 ILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGN-----LD 221
+++S PP++ + S E L G +L +FA + EF V + L
Sbjct: 173 VVSSSDHFPPFINI-----SYEEL---GSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQ 224
Query: 222 PERLNISK-REAVAV--HWLQHSLYD--VTGSDTN--TLCL--LQRLAPKVVTVVEQDLS 272
R+ S EA+ V H + + + +T S ++ T+ L L+ L P++VT++E+D+
Sbjct: 225 QLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVD 284
Query: 273 -PAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSG 331
+ + + R A +Y+ FD+ SE+R E ++ S +I NV+A G R
Sbjct: 285 LTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAEI-SWKIENVVAKEGAERVE 340
Query: 332 DVKF-HNWREKLQRSGFKGISLAGNAATQATLLLGMFPCD-GYTLVEDNGTLKLGWKDLC 389
+ W E+++ + F G+ + +A +L G +D+ +L L WK
Sbjct: 341 RTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHS 400
Query: 390 LLTASAWRPL 399
++ A+ W P+
Sbjct: 401 VVFATVWVPI 410
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 398 0.00097 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 620 (66 KB)
Total size of DFA: 247 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.59u 0.10s 32.69t Elapsed: 00:00:02
Total cpu time: 32.60u 0.10s 32.70t Elapsed: 00:00:02
Start: Thu May 9 14:10:45 2013 End: Thu May 9 14:10:47 2013