Query 014896
Match_columns 416
No_of_seqs 122 out of 712
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 03:03:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014896.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014896hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.0 0.0065 2.2E-07 57.7 12.4 109 146-271 70-181 (261)
2 3dtn_A Putative methyltransfer 95.9 0.0077 2.6E-07 54.8 5.4 116 136-272 33-152 (234)
3 3dh0_A SAM dependent methyltra 95.1 0.33 1.1E-05 43.2 13.2 111 136-268 27-143 (219)
4 3dp7_A SAM-dependent methyltra 94.9 0.23 7.7E-06 48.9 12.3 117 137-272 170-291 (363)
5 2r3s_A Uncharacterized protein 94.0 0.25 8.5E-06 47.3 10.1 115 136-272 153-275 (335)
6 2ip2_A Probable phenazine-spec 93.9 0.2 6.9E-06 48.2 9.3 115 136-271 158-275 (334)
7 3htx_A HEN1; HEN1, small RNA m 93.7 0.16 5.5E-06 56.1 9.0 122 136-271 711-837 (950)
8 3i53_A O-methyltransferase; CO 93.4 0.15 5.1E-06 49.2 7.5 111 139-271 162-277 (332)
9 4a6d_A Hydroxyindole O-methylt 93.4 0.53 1.8E-05 46.2 11.4 159 134-352 167-331 (353)
10 3gwz_A MMCR; methyltransferase 93.3 0.32 1.1E-05 47.9 9.8 115 136-272 192-311 (369)
11 3bkx_A SAM-dependent methyltra 93.2 1.6 5.6E-05 40.1 14.1 117 137-272 34-163 (275)
12 3dlc_A Putative S-adenosyl-L-m 93.1 0.49 1.7E-05 41.6 9.8 112 134-268 32-147 (219)
13 3mgg_A Methyltransferase; NYSG 93.1 0.33 1.1E-05 45.0 9.1 105 145-270 36-144 (276)
14 1kpg_A CFA synthase;, cyclopro 92.8 0.64 2.2E-05 43.4 10.5 107 137-266 55-165 (287)
15 1vl5_A Unknown conserved prote 92.0 0.93 3.2E-05 41.6 10.4 106 137-267 28-138 (260)
16 3hem_A Cyclopropane-fatty-acyl 91.7 1.3 4.6E-05 41.7 11.4 111 137-267 63-181 (302)
17 3fzg_A 16S rRNA methylase; met 91.4 0.37 1.3E-05 44.2 6.8 101 148-269 51-152 (200)
18 3mcz_A O-methyltransferase; ad 91.3 0.4 1.4E-05 46.5 7.4 117 137-272 169-291 (352)
19 3hnr_A Probable methyltransfer 91.2 0.55 1.9E-05 41.7 7.8 54 135-197 34-87 (220)
20 1nkv_A Hypothetical protein YJ 91.1 1 3.5E-05 41.0 9.7 112 135-269 25-141 (256)
21 2aot_A HMT, histamine N-methyl 91.0 0.41 1.4E-05 45.2 7.0 52 145-197 51-102 (292)
22 3jwg_A HEN1, methyltransferase 90.8 0.6 2E-05 41.6 7.6 116 136-270 19-142 (219)
23 3ujc_A Phosphoethanolamine N-m 90.4 0.63 2.1E-05 42.4 7.4 66 124-197 33-98 (266)
24 3reo_A (ISO)eugenol O-methyltr 90.2 0.64 2.2E-05 45.8 7.8 109 136-272 192-304 (368)
25 3jwh_A HEN1; methyltransferase 90.1 1 3.6E-05 40.0 8.6 114 137-269 20-141 (217)
26 3ocj_A Putative exported prote 89.5 1.5 5.3E-05 41.4 9.7 105 145-267 117-225 (305)
27 3p9c_A Caffeic acid O-methyltr 89.4 0.54 1.8E-05 46.3 6.5 43 136-185 190-233 (364)
28 2xvm_A Tellurite resistance pr 88.6 2.2 7.6E-05 36.8 9.4 109 135-265 21-132 (199)
29 3r0q_C Probable protein argini 88.6 1.4 4.9E-05 43.5 9.0 145 137-301 54-209 (376)
30 3m70_A Tellurite resistance pr 88.4 1.8 6E-05 40.3 9.1 108 136-265 110-219 (286)
31 3kkz_A Uncharacterized protein 88.4 2.7 9.1E-05 38.7 10.2 126 120-268 19-150 (267)
32 3mq2_A 16S rRNA methyltransfer 87.7 0.9 3.1E-05 40.5 6.3 118 137-267 18-138 (218)
33 3bus_A REBM, methyltransferase 87.6 1.7 5.7E-05 40.0 8.3 109 136-268 51-166 (273)
34 3bgv_A MRNA CAP guanine-N7 met 87.5 1.5 5.3E-05 41.5 8.2 120 137-267 23-153 (313)
35 3ccf_A Cyclopropane-fatty-acyl 87.3 2.3 7.7E-05 39.5 9.1 104 136-267 47-152 (279)
36 3hm2_A Precorrin-6Y C5,15-meth 87.1 7 0.00024 32.9 11.6 61 136-207 15-75 (178)
37 2qe6_A Uncharacterized protein 87.1 4.7 0.00016 37.9 11.3 70 120-197 47-124 (274)
38 1xxl_A YCGJ protein; structura 86.8 5.5 0.00019 35.9 11.3 112 134-270 9-126 (239)
39 3e8s_A Putative SAM dependent 86.5 1.3 4.4E-05 39.1 6.6 55 133-196 39-93 (227)
40 3frh_A 16S rRNA methylase; met 86.3 1.9 6.6E-05 40.8 7.9 101 147-269 106-206 (253)
41 2fk8_A Methoxy mycolic acid sy 85.9 3 0.0001 39.4 9.3 107 137-266 81-191 (318)
42 3u81_A Catechol O-methyltransf 85.7 3.5 0.00012 36.9 9.2 109 146-269 58-170 (221)
43 3thr_A Glycine N-methyltransfe 85.6 0.8 2.7E-05 42.8 5.0 54 136-198 47-100 (293)
44 3ofk_A Nodulation protein S; N 85.6 3.3 0.00011 36.5 8.9 109 137-267 42-152 (216)
45 3lcc_A Putative methyl chlorid 85.5 2.1 7.2E-05 38.5 7.6 99 148-266 68-168 (235)
46 3g5l_A Putative S-adenosylmeth 85.5 3.5 0.00012 37.3 9.2 108 134-267 32-143 (253)
47 3giw_A Protein of unknown func 85.5 1.9 6.5E-05 41.4 7.6 141 116-269 44-201 (277)
48 4htf_A S-adenosylmethionine-de 85.3 2.5 8.6E-05 39.2 8.3 108 138-268 61-172 (285)
49 4fsd_A Arsenic methyltransfera 85.2 3.8 0.00013 40.3 9.9 110 146-267 83-201 (383)
50 3lcv_B Sisomicin-gentamicin re 85.0 3.2 0.00011 39.9 8.8 135 137-296 125-259 (281)
51 3g5t_A Trans-aconitate 3-methy 84.8 2.4 8.3E-05 39.8 8.0 108 145-267 35-147 (299)
52 2o57_A Putative sarcosine dime 84.7 5 0.00017 37.3 10.1 110 136-269 68-188 (297)
53 3uwp_A Histone-lysine N-methyl 84.5 2 6.7E-05 43.9 7.5 120 135-266 162-285 (438)
54 3lst_A CALO1 methyltransferase 83.5 1.2 4.1E-05 43.2 5.3 44 136-186 174-217 (348)
55 1x19_A CRTF-related protein; m 83.4 2.8 9.4E-05 40.7 7.9 115 135-271 179-298 (359)
56 3iv6_A Putative Zn-dependent a 83.4 1.4 4.8E-05 41.7 5.6 54 136-198 35-88 (261)
57 2p7i_A Hypothetical protein; p 83.4 2.1 7.1E-05 38.2 6.5 107 136-269 31-142 (250)
58 3f4k_A Putative methyltransfer 83.2 6.4 0.00022 35.5 9.9 125 121-268 20-150 (257)
59 3cc8_A Putative methyltransfer 81.0 3.2 0.00011 36.5 6.8 51 135-195 22-72 (230)
60 1y8c_A S-adenosylmethionine-de 80.5 3.6 0.00012 36.6 7.0 111 137-268 26-141 (246)
61 3q7e_A Protein arginine N-meth 79.6 4.3 0.00015 39.5 7.8 104 146-268 66-172 (349)
62 1g6q_1 HnRNP arginine N-methyl 78.7 6.8 0.00023 37.7 8.8 114 136-268 28-144 (328)
63 3e23_A Uncharacterized protein 78.6 1.7 5.8E-05 38.3 4.1 96 146-268 43-140 (211)
64 1wzn_A SAM-dependent methyltra 78.3 7.1 0.00024 35.2 8.4 109 139-268 34-144 (252)
65 2kw5_A SLR1183 protein; struct 78.3 23 0.00079 30.4 11.5 98 149-268 32-130 (202)
66 2y1w_A Histone-arginine methyl 77.9 6.6 0.00023 38.1 8.5 112 135-268 39-154 (348)
67 3b3j_A Histone-arginine methyl 76.7 3.3 0.00011 42.6 6.1 112 136-268 148-262 (480)
68 4e2x_A TCAB9; kijanose, tetron 76.7 4.6 0.00016 39.9 7.1 107 137-268 98-207 (416)
69 1wy7_A Hypothetical protein PH 76.5 28 0.00095 30.1 11.6 93 146-260 49-141 (207)
70 3h2b_A SAM-dependent methyltra 75.6 12 0.0004 32.4 8.7 94 147-267 42-139 (203)
71 1ve3_A Hypothetical protein PH 75.2 14 0.00047 32.4 9.2 101 147-267 39-140 (227)
72 1nv8_A HEMK protein; class I a 74.6 14 0.00048 34.7 9.6 54 147-212 124-179 (284)
73 3vc1_A Geranyl diphosphate 2-C 74.3 13 0.00043 35.0 9.2 107 136-265 106-217 (312)
74 2yxd_A Probable cobalt-precorr 74.0 6.2 0.00021 33.2 6.3 102 137-266 26-128 (183)
75 4dcm_A Ribosomal RNA large sub 72.2 12 0.0004 37.0 8.7 122 133-267 209-332 (375)
76 3ou2_A SAM-dependent methyltra 72.1 7.6 0.00026 33.8 6.6 109 135-269 34-147 (218)
77 3p2e_A 16S rRNA methylase; met 71.6 7 0.00024 35.5 6.4 110 145-267 23-137 (225)
78 2fyt_A Protein arginine N-meth 71.6 11 0.00039 36.3 8.3 112 136-266 54-168 (340)
79 3pfg_A N-methyltransferase; N, 71.4 4.2 0.00014 37.1 4.9 98 146-268 50-150 (263)
80 3dli_A Methyltransferase; PSI- 71.2 2.3 7.8E-05 38.4 3.0 42 146-196 41-82 (240)
81 1ri5_A MRNA capping enzyme; me 70.3 16 0.00053 33.5 8.7 108 146-268 64-173 (298)
82 2vdw_A Vaccinia virus capping 70.2 18 0.00062 34.3 9.3 45 147-199 49-93 (302)
83 3d2l_A SAM-dependent methyltra 70.2 13 0.00045 32.9 7.9 107 138-268 27-136 (243)
84 3gu3_A Methyltransferase; alph 69.9 19 0.00066 33.3 9.3 105 145-270 21-128 (284)
85 1yzh_A TRNA (guanine-N(7)-)-me 69.8 27 0.00093 30.6 9.9 110 146-269 41-156 (214)
86 3lbf_A Protein-L-isoaspartate 69.6 18 0.0006 31.5 8.5 63 136-211 67-130 (210)
87 3grz_A L11 mtase, ribosomal pr 69.5 10 0.00034 33.1 6.8 69 131-211 43-114 (205)
88 2qn6_B Translation initiation 69.3 5.5 0.00019 31.9 4.5 39 173-211 49-91 (93)
89 3sm3_A SAM-dependent methyltra 69.2 4.6 0.00016 35.7 4.5 41 147-196 31-71 (235)
90 2yqz_A Hypothetical protein TT 68.5 23 0.00079 31.7 9.3 99 145-268 38-140 (263)
91 1zg3_A Isoflavanone 4'-O-methy 68.2 11 0.00039 36.3 7.5 46 137-190 182-229 (358)
92 2p35_A Trans-aconitate 2-methy 68.2 8.1 0.00028 34.8 6.1 105 137-267 24-130 (259)
93 2jjq_A Uncharacterized RNA met 67.4 73 0.0025 31.8 13.5 96 147-268 291-386 (425)
94 2fpo_A Methylase YHHF; structu 66.6 12 0.00042 32.9 6.8 101 148-269 56-160 (202)
95 1dus_A MJ0882; hypothetical pr 66.6 11 0.00038 31.8 6.4 113 134-268 40-156 (194)
96 3i9f_A Putative type 11 methyl 65.6 31 0.0011 28.7 8.9 51 137-196 8-58 (170)
97 1xj5_A Spermidine synthase 1; 65.3 20 0.00068 34.8 8.6 136 146-293 120-257 (334)
98 3e05_A Precorrin-6Y C5,15-meth 65.3 9.5 0.00032 33.3 5.7 57 136-199 30-86 (204)
99 1xtp_A LMAJ004091AAA; SGPP, st 64.1 15 0.0005 32.9 6.9 109 136-267 83-195 (254)
100 1o9g_A RRNA methyltransferase; 63.9 10 0.00034 34.4 5.8 56 138-198 43-98 (250)
101 3njr_A Precorrin-6Y methylase; 63.7 17 0.00058 32.1 7.2 63 136-211 45-109 (204)
102 1qzz_A RDMB, aclacinomycin-10- 63.0 9.1 0.00031 36.9 5.6 111 136-269 172-288 (374)
103 4hc4_A Protein arginine N-meth 62.8 14 0.00048 36.7 7.0 100 149-266 86-186 (376)
104 2yxe_A Protein-L-isoaspartate 62.7 13 0.00046 32.4 6.3 57 137-199 68-124 (215)
105 3g89_A Ribosomal RNA small sub 62.5 9.3 0.00032 35.2 5.4 63 145-220 79-142 (249)
106 1uwv_A 23S rRNA (uracil-5-)-me 62.3 54 0.0018 32.7 11.4 109 138-268 278-388 (433)
107 4hg2_A Methyltransferase type 62.3 8.9 0.0003 35.7 5.2 35 149-192 42-76 (257)
108 4dzr_A Protein-(glutamine-N5) 61.8 6.4 0.00022 34.1 3.9 54 138-198 21-75 (215)
109 3g07_A 7SK snRNA methylphospha 61.8 5.9 0.0002 37.3 3.9 56 138-200 36-93 (292)
110 3ege_A Putative methyltransfer 61.5 9.8 0.00033 34.8 5.3 108 136-272 24-134 (261)
111 3adn_A Spermidine synthase; am 61.5 31 0.0011 32.7 9.0 137 146-296 83-223 (294)
112 3l8d_A Methyltransferase; stru 60.7 15 0.0005 32.6 6.2 95 146-267 53-151 (242)
113 3bwc_A Spermidine synthase; SA 60.7 27 0.00094 33.0 8.5 114 146-269 95-210 (304)
114 1l3i_A Precorrin-6Y methyltran 60.6 19 0.00067 30.2 6.8 53 137-198 24-76 (192)
115 1jsx_A Glucose-inhibited divis 60.4 12 0.0004 32.6 5.4 97 147-268 66-164 (207)
116 1ws6_A Methyltransferase; stru 60.3 16 0.00055 30.3 6.1 102 146-269 41-147 (171)
117 2p8j_A S-adenosylmethionine-de 59.9 27 0.00093 30.0 7.8 99 147-267 24-126 (209)
118 1ne2_A Hypothetical protein TA 59.7 15 0.00053 31.7 6.1 45 146-198 51-95 (200)
119 3p9n_A Possible methyltransfer 58.0 25 0.00084 30.2 7.0 108 146-271 44-155 (189)
120 3fut_A Dimethyladenosine trans 57.3 17 0.00059 34.3 6.3 66 122-197 18-88 (271)
121 1iy9_A Spermidine synthase; ro 57.2 42 0.0014 31.2 9.0 136 146-295 75-213 (275)
122 3g2m_A PCZA361.24; SAM-depende 56.8 9.5 0.00033 35.6 4.4 55 135-199 72-126 (299)
123 1inl_A Spermidine synthase; be 55.3 58 0.002 30.6 9.8 136 147-296 91-230 (296)
124 3mti_A RRNA methylase; SAM-dep 54.8 16 0.00055 31.0 5.3 52 148-212 24-76 (185)
125 3eey_A Putative rRNA methylase 54.7 30 0.001 29.6 7.0 45 148-198 24-68 (197)
126 2avn_A Ubiquinone/menaquinone 52.8 32 0.0011 31.1 7.2 42 146-196 54-95 (260)
127 3mb5_A SAM-dependent methyltra 52.4 26 0.00091 31.4 6.6 57 137-199 84-140 (255)
128 1dl5_A Protein-L-isoaspartate 52.3 21 0.00072 33.8 6.1 67 135-211 64-131 (317)
129 3bzb_A Uncharacterized protein 52.1 83 0.0029 29.0 10.2 43 147-197 80-123 (281)
130 2i62_A Nicotinamide N-methyltr 51.7 26 0.00088 31.4 6.3 46 145-198 55-100 (265)
131 2esr_A Methyltransferase; stru 51.5 35 0.0012 28.6 6.9 104 146-270 31-139 (177)
132 2pbf_A Protein-L-isoaspartate 50.9 30 0.001 30.4 6.6 61 137-199 69-131 (227)
133 2b2c_A Spermidine synthase; be 50.5 37 0.0013 32.5 7.5 136 146-295 108-246 (314)
134 2nxc_A L11 mtase, ribosomal pr 49.7 22 0.00074 32.6 5.5 67 132-211 104-172 (254)
135 3dr5_A Putative O-methyltransf 49.5 19 0.00066 32.4 5.1 58 144-211 54-114 (221)
136 1i1n_A Protein-L-isoaspartate 49.4 29 0.001 30.5 6.2 57 137-199 66-124 (226)
137 2a14_A Indolethylamine N-methy 49.3 82 0.0028 28.6 9.5 47 144-198 53-99 (263)
138 3tqs_A Ribosomal RNA small sub 49.1 44 0.0015 31.0 7.6 53 137-198 20-72 (255)
139 3bkw_A MLL3908 protein, S-aden 49.0 22 0.00076 31.4 5.4 53 136-196 33-85 (243)
140 3dmg_A Probable ribosomal RNA 48.7 77 0.0026 31.1 9.7 117 134-268 215-339 (381)
141 3lpm_A Putative methyltransfer 48.6 43 0.0015 30.4 7.4 60 136-207 37-98 (259)
142 2b25_A Hypothetical protein; s 48.6 31 0.0011 32.8 6.7 72 124-201 83-154 (336)
143 2fhp_A Methylase, putative; al 48.4 43 0.0015 28.0 7.0 46 146-199 44-89 (187)
144 1m6y_A S-adenosyl-methyltransf 48.2 14 0.00049 35.4 4.1 56 138-200 18-73 (301)
145 4azs_A Methyltransferase WBDD; 48.0 19 0.00065 37.4 5.4 55 146-213 66-121 (569)
146 2b3t_A Protein methyltransfera 47.2 27 0.00093 32.1 5.8 56 145-211 108-164 (276)
147 2g72_A Phenylethanolamine N-me 47.0 19 0.00064 33.3 4.7 45 146-198 71-115 (289)
148 3tr6_A O-methyltransferase; ce 46.7 28 0.00097 30.5 5.7 55 147-211 65-121 (225)
149 2pwy_A TRNA (adenine-N(1)-)-me 46.4 34 0.0012 30.5 6.3 59 136-200 86-144 (258)
150 3q87_B N6 adenine specific DNA 46.2 29 0.00098 29.5 5.4 35 148-192 25-59 (170)
151 1i9g_A Hypothetical protein RV 46.1 37 0.0013 30.9 6.6 59 136-200 89-147 (280)
152 2i7c_A Spermidine synthase; tr 46.0 31 0.0011 32.2 6.1 113 146-269 78-192 (283)
153 1r18_A Protein-L-isoaspartate( 45.9 41 0.0014 29.7 6.7 63 137-200 73-137 (227)
154 3ckk_A TRNA (guanine-N(7)-)-me 45.7 29 0.00098 31.6 5.6 50 144-200 44-93 (235)
155 2h00_A Methyltransferase 10 do 44.9 21 0.00073 32.2 4.6 56 146-212 65-122 (254)
156 1pjz_A Thiopurine S-methyltran 44.8 30 0.001 30.3 5.5 42 146-196 22-63 (203)
157 2h1r_A Dimethyladenosine trans 44.4 41 0.0014 31.7 6.7 55 135-198 31-85 (299)
158 3dxy_A TRNA (guanine-N(7)-)-me 43.5 31 0.0011 30.9 5.4 110 146-270 34-151 (218)
159 2ksn_A Ubiquitin domain-contai 42.7 26 0.00091 29.9 4.4 54 21-75 32-93 (137)
160 1u2z_A Histone-lysine N-methyl 42.6 60 0.0021 32.8 7.9 118 136-268 232-358 (433)
161 1yb2_A Hypothetical protein TA 41.9 26 0.00089 32.3 4.8 55 137-197 101-155 (275)
162 3tfw_A Putative O-methyltransf 41.8 18 0.00062 32.9 3.6 102 147-269 64-170 (248)
163 1vlm_A SAM-dependent methyltra 41.7 46 0.0016 29.1 6.3 37 147-196 48-84 (219)
164 2vdv_E TRNA (guanine-N(7)-)-me 41.6 66 0.0023 28.8 7.5 48 146-200 49-96 (246)
165 2gpy_A O-methyltransferase; st 41.3 32 0.0011 30.5 5.1 102 147-268 55-159 (233)
166 1tw3_A COMT, carminomycin 4-O- 41.2 26 0.00088 33.5 4.8 112 136-270 173-290 (360)
167 1zq9_A Probable dimethyladenos 40.6 48 0.0016 31.0 6.5 53 136-197 18-70 (285)
168 1fp2_A Isoflavone O-methyltran 40.5 25 0.00087 33.6 4.6 39 145-191 187-225 (352)
169 1jg1_A PIMT;, protein-L-isoasp 39.6 34 0.0012 30.5 5.1 55 136-198 81-135 (235)
170 2pjd_A Ribosomal RNA small sub 39.0 17 0.00059 34.9 3.1 116 134-267 184-301 (343)
171 2fca_A TRNA (guanine-N(7)-)-me 38.9 34 0.0012 30.3 4.9 55 146-211 38-93 (213)
172 1vbf_A 231AA long hypothetical 38.4 40 0.0014 29.6 5.3 52 137-197 61-112 (231)
173 1xdz_A Methyltransferase GIDB; 37.7 46 0.0016 29.7 5.7 100 147-268 71-173 (240)
174 3ntv_A MW1564 protein; rossman 37.5 26 0.00089 31.4 3.9 103 146-269 71-176 (232)
175 3ftd_A Dimethyladenosine trans 37.4 21 0.00073 32.9 3.4 52 136-195 21-72 (249)
176 1o54_A SAM-dependent O-methylt 37.3 50 0.0017 30.2 6.0 58 136-199 102-159 (277)
177 3duw_A OMT, O-methyltransferas 37.0 28 0.00096 30.5 4.0 56 146-211 58-115 (223)
178 1yz7_A Probable translation in 36.7 47 0.0016 29.8 5.4 44 173-216 132-179 (188)
179 3m33_A Uncharacterized protein 36.5 31 0.0011 30.6 4.2 41 147-196 49-89 (226)
180 2gb4_A Thiopurine S-methyltran 36.4 53 0.0018 30.1 6.0 42 145-195 67-108 (252)
181 2gs9_A Hypothetical protein TT 36.3 98 0.0033 26.5 7.5 48 138-197 29-76 (211)
182 1p91_A Ribosomal RNA large sub 36.0 40 0.0014 30.5 5.0 45 145-196 84-128 (269)
183 3cgg_A SAM-dependent methyltra 35.7 42 0.0014 28.1 4.8 52 136-197 37-88 (195)
184 2ift_A Putative methylase HI07 34.8 44 0.0015 29.2 4.9 103 148-270 55-164 (201)
185 1zx0_A Guanidinoacetate N-meth 34.6 58 0.002 28.9 5.8 55 145-211 59-113 (236)
186 2ozv_A Hypothetical protein AT 34.4 44 0.0015 30.6 5.0 57 135-198 24-81 (260)
187 3gru_A Dimethyladenosine trans 34.0 92 0.0031 29.5 7.3 53 137-198 41-93 (295)
188 3fpf_A Mtnas, putative unchara 33.8 58 0.002 31.2 5.9 99 145-268 121-221 (298)
189 1qam_A ERMC' methyltransferase 33.4 38 0.0013 30.8 4.4 53 136-197 20-72 (244)
190 3opn_A Putative hemolysin; str 33.2 30 0.001 31.4 3.6 60 124-192 15-75 (232)
191 3tm4_A TRNA (guanine N2-)-meth 32.8 1.5E+02 0.0052 28.6 8.9 62 138-211 210-273 (373)
192 3gdh_A Trimethylguanosine synt 32.5 67 0.0023 28.3 5.9 54 146-212 78-133 (241)
193 2ipx_A RRNA 2'-O-methyltransfe 32.3 1.1E+02 0.0037 26.9 7.2 42 146-193 77-118 (233)
194 2efj_A 3,7-dimethylxanthine me 32.2 80 0.0027 31.4 6.8 54 147-200 53-116 (384)
195 3a27_A TYW2, uncharacterized p 32.1 2.9E+02 0.0098 25.2 10.4 93 149-266 122-216 (272)
196 1nt2_A Fibrillarin-like PRE-rR 31.9 71 0.0024 28.2 5.9 40 147-193 58-97 (210)
197 3uzu_A Ribosomal RNA small sub 31.4 64 0.0022 30.3 5.7 55 137-196 33-87 (279)
198 1ixk_A Methyltransferase; open 31.2 91 0.0031 29.4 6.8 67 134-210 106-173 (315)
199 2ex4_A Adrenal gland protein A 31.2 70 0.0024 28.3 5.7 117 134-269 62-186 (241)
200 2o07_A Spermidine synthase; st 29.4 83 0.0028 29.7 6.2 137 146-296 95-234 (304)
201 2hnk_A SAM-dependent O-methylt 29.2 61 0.0021 28.8 5.0 46 147-198 61-106 (239)
202 1sui_A Caffeoyl-COA O-methyltr 28.6 1.2E+02 0.0041 27.4 7.0 55 147-211 80-136 (247)
203 3c3p_A Methyltransferase; NP_9 27.8 42 0.0014 29.2 3.5 45 148-198 58-102 (210)
204 2j66_A BTRK, decarboxylase; bu 27.7 1.5E+02 0.0051 29.1 7.9 63 146-212 133-224 (428)
205 2kl8_A OR15; structural genomi 27.6 97 0.0033 23.1 4.8 35 176-212 42-76 (85)
206 3c3y_A Pfomt, O-methyltransfer 27.4 2E+02 0.0068 25.5 8.2 56 146-211 70-127 (237)
207 1af7_A Chemotaxis receptor met 27.0 65 0.0022 30.2 4.9 52 146-197 105-157 (274)
208 2pxx_A Uncharacterized protein 26.3 1E+02 0.0035 26.2 5.7 46 145-198 41-86 (215)
209 2avd_A Catechol-O-methyltransf 26.1 1.2E+02 0.004 26.4 6.2 56 146-211 69-126 (229)
210 3ggd_A SAM-dependent methyltra 26.0 39 0.0014 30.0 3.0 105 146-269 56-164 (245)
211 4f3n_A Uncharacterized ACR, CO 25.9 77 0.0026 32.1 5.4 125 57-200 61-189 (432)
212 3orh_A Guanidinoacetate N-meth 25.5 68 0.0023 28.8 4.6 54 146-211 60-113 (236)
213 2f8l_A Hypothetical protein LM 24.9 2.4E+02 0.0084 26.5 8.7 52 145-198 129-180 (344)
214 3gjy_A Spermidine synthase; AP 24.6 82 0.0028 30.4 5.1 45 146-197 89-133 (317)
215 3cw2_C Translation initiation 23.9 79 0.0027 29.7 4.8 39 173-211 222-264 (266)
216 2yvl_A TRMI protein, hypotheti 23.6 1.2E+02 0.004 26.7 5.8 53 137-198 82-134 (248)
217 3tma_A Methyltransferase; thum 23.6 1.3E+02 0.0045 28.6 6.5 60 138-207 195-254 (354)
218 3ghf_A Septum site-determining 23.3 80 0.0027 26.0 4.2 50 148-208 49-99 (120)
219 1uir_A Polyamine aminopropyltr 22.8 1.1E+02 0.0039 28.8 5.8 111 146-268 77-194 (314)
220 3ajd_A Putative methyltransfer 21.5 1.3E+02 0.0046 27.5 5.8 60 138-207 75-134 (274)
221 3bxo_A N,N-dimethyltransferase 21.3 2.5E+02 0.0087 24.1 7.5 43 145-196 39-81 (239)
222 2qy6_A UPF0209 protein YFCK; s 21.0 1.5E+02 0.005 27.4 6.0 50 144-193 58-115 (257)
223 4a69_A Histone deacetylase 3,; 20.5 54 0.0018 32.6 2.9 25 137-161 153-179 (376)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.99 E-value=0.0065 Score=57.70 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=65.4
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
..-+|+|+|.|.|. +...|+.+- +.|..+||||+.+...++.+.+++.++. ...+++|.. ..+.++..
T Consensus 70 ~~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~~--~D~~~~~~--- 137 (261)
T 4gek_A 70 PGTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVIE--GDIRDIAI--- 137 (261)
T ss_dssp TTCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEE--SCTTTCCC---
T ss_pred CCCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEee--cccccccc---
Confidence 34579999999884 445566553 3467899999999998988887765432 223455542 23444332
Q ss_pred ccCCCceEEEee-ecccccccCCCchHHHHHH-HhcCCcEE-EEeccCC
Q 014896 226 NISKREAVAVHW-LQHSLYDVTGSDTNTLCLL-QRLAPKVV-TVVEQDL 271 (416)
Q Consensus 226 ~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~i-r~L~P~vv-tlvE~ea 271 (416)
.+-++++.|+ +||+ .+ .....+|..| +.|+|.-. ++.|.-.
T Consensus 138 --~~~d~v~~~~~l~~~-~~--~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 138 --ENASMVVLNFTLQFL-EP--SERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp --CSEEEEEEESCGGGS-CH--HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred --cccccceeeeeeeec-Cc--hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 2334555565 4553 21 1234566654 77999854 5666533
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.95 E-value=0.0077 Score=54.83 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=64.4
Q ss_pred HHHHHhhh-cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecc
Q 014896 136 QAIQEAFE-REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVA 214 (416)
Q Consensus 136 qaILeA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~ 214 (416)
+.+++.+. ..+.-+|+|+|.|.|.- ...|+.+. |..++|||+.+...++.+.+++. ..+ ..+|..
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~----~~~-~~~~~~-- 98 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMSEKMLEIAKNRFR----GNL-KVKYIE-- 98 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESCHHHHHHHHHHTC----SCT-TEEEEE--
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECCHHHHHHHHHhhc----cCC-CEEEEe--
Confidence 66677665 45668999999998853 33444332 45799999999887777665542 222 344432
Q ss_pred ccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEE-EEeccCCC
Q 014896 215 EKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVV-TVVEQDLS 272 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vv-tlvE~ea~ 272 (416)
....++... ..=++++.+ .++|. .+ .....+|.. .+.|+|.-. ++++....
T Consensus 99 ~d~~~~~~~----~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 99 ADYSKYDFE----EKYDMVVSALSIHHL-ED--EDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp SCTTTCCCC----SCEEEEEEESCGGGS-CH--HHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CchhccCCC----CCceEEEEeCccccC-CH--HHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 233333321 122344444 34553 11 111235655 467999855 45554333
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.13 E-value=0.33 Score=43.16 Aligned_cols=111 Identities=11% Similarity=0.196 Sum_probs=65.7
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEecc
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVA 214 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~ 214 (416)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+.+...++.+.+++.. .|++ ++|..
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~-- 94 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEEMVNYAWEKVNK----LGLKNVEVLK-- 94 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHHHHHHHHHHHHH----HTCTTEEEEE--
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHHHHHHHHHHHHH----cCCCcEEEEe--
Confidence 567777765566789999999986444444333 3556999999998888877766543 4554 44443
Q ss_pred ccccccCccccccCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE-Eec
Q 014896 215 EKVGNLDPERLNISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT-VVE 268 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt-lvE 268 (416)
..+.++. ..++ ++++.+ .++|. .....+|.. .+.|+|.-.+ +++
T Consensus 95 ~d~~~~~-----~~~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 95 SEENKIP-----LPDNTVDFIFMAFTFHEL-----SEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp CBTTBCS-----SCSSCEEEEEEESCGGGC-----SSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCC-----CCCCCeeEEEeehhhhhc-----CCHHHHHHHHHHHhCCCeEEEEEE
Confidence 2233332 1122 344444 34553 133456655 4779998554 444
No 4
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=94.89 E-value=0.23 Score=48.89 Aligned_cols=117 Identities=15% Similarity=0.035 Sum_probs=62.5
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVA 214 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~ 214 (416)
.+++.+.....-+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++ +..|++ .+|..-
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~v~~~~~- 236 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDL-PQQLEMMRKQT----AGLSGSERIHGHGA- 236 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEEC-HHHHHHHHHHH----TTCTTGGGEEEEEC-
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeC-HHHHHHHHHHH----HhcCcccceEEEEc-
Confidence 45555444556799999999885 344454442 5679999998 55566655543 344552 555432
Q ss_pred ccccccCccccccCCCceEEEee-ecccccccCCCchHHHHHH-HhcCCcE-EEEeccCCC
Q 014896 215 EKVGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCLL-QRLAPKV-VTVVEQDLS 272 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~i-r~L~P~v-vtlvE~ea~ 272 (416)
...+.+. .+. ..-++++.+. +||. .+ .....+|..+ +.|+|.- ++++|.-.+
T Consensus 237 -d~~~~~~-~~p-~~~D~v~~~~vlh~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 237 -NLLDRDV-PFP-TGFDAVWMSQFLDCF-SE--EEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp -CCCSSSC-CCC-CCCSEEEEESCSTTS-CH--HHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred -cccccCC-CCC-CCcCEEEEechhhhC-CH--HHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 2222110 011 1234555444 4432 21 1123456654 6699975 456665444
No 5
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.99 E-value=0.25 Score=47.35 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=67.1
Q ss_pred HHHHHhhhc--CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 136 QAIQEAFER--EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 136 qaILeA~~g--~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
..|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|+++.+ ..++.+.+++.+ .|++ ++|.
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~~~~a~~~~~~----~~~~~~v~~~ 220 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-SVLEVAKENARI----QGVASRYHTI 220 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-HHHHHHHHHHHH----HTCGGGEEEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-HHHHHHHHHHHh----cCCCcceEEE
Confidence 467777765 677899999999985 444455443 45799999999 888877776643 3443 5554
Q ss_pred eccccccccCccccccCC-CceEEE-eeecccccccCCCchHHHHH-HHhcCCcE-EEEeccCCC
Q 014896 212 PVAEKVGNLDPERLNISK-REAVAV-HWLQHSLYDVTGSDTNTLCL-LQRLAPKV-VTVVEQDLS 272 (416)
Q Consensus 212 ~v~~~~e~l~~~~l~~~~-~EalaV-n~l~h~l~~~~~~~~~~L~~-ir~L~P~v-vtlvE~ea~ 272 (416)
.. ++.+.. ... -++++. |.+||. .+ .....+|.. .+.|+|.- ++++|....
T Consensus 221 ~~--d~~~~~-----~~~~~D~v~~~~~l~~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 221 AG--SAFEVD-----YGNDYDLVLLPNFLHHF-DV--ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp ES--CTTTSC-----CCSCEEEEEEESCGGGS-CH--HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ec--ccccCC-----CCCCCcEEEEcchhccC-CH--HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 32 222211 112 134443 334443 11 112355655 46689986 566776544
No 6
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.93 E-value=0.2 Score=48.20 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=62.0
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccc
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAE 215 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~ 215 (416)
+.|++.+.-.. .+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++.+.. +.-.++|..-
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~-- 224 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGG-- 224 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEES--
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecC--
Confidence 56667664344 899999999995 444444442 4579999998 666666666654332 1112455432
Q ss_pred cccccCccccccCCCceEEEe-eecccccccCCCchHHHHHH-HhcCCcE-EEEeccCC
Q 014896 216 KVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCLL-QRLAPKV-VTVVEQDL 271 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~i-r~L~P~v-vtlvE~ea 271 (416)
++.+ + +. ..-++++.+ .+||. .+ .....+|..+ +.|+|.- ++++|.-.
T Consensus 225 d~~~--~--~~-~~~D~v~~~~vl~~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 225 DMLQ--E--VP-SNGDIYLLSRIIGDL-DE--AASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp CTTT--C--CC-SSCSEEEEESCGGGC-CH--HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCCC--C--CC-CCCCEEEEchhccCC-CH--HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 1211 1 11 122444444 34442 11 1123556554 6789975 45666543
No 7
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.75 E-value=0.16 Score=56.09 Aligned_cols=122 Identities=13% Similarity=0.152 Sum_probs=74.8
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH--HHHcCCC-eEEEe
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF--AEKLGLP-FEFCP 212 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~--A~~lgvp-FeF~~ 212 (416)
+.|++.+.....-.|+|+|.|.| .+...|+.+ ++|.-++|||+.+...++.+.++|... ++..|++ .+|.
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi- 783 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY- 783 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE-
T ss_pred HHHHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE-
Confidence 34566666556668999999988 455666655 346679999999999999998888765 2234554 3333
Q ss_pred ccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEeccCC
Q 014896 213 VAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDL 271 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea 271 (416)
...+.++... ...=++++.+ .++|+. + .....++.. .+-|+|.++++...+.
T Consensus 784 -qGDa~dLp~~---d~sFDlVV~~eVLeHL~-d--p~l~~~L~eI~RvLKPG~LIISTPN~ 837 (950)
T 3htx_A 784 -DGSILEFDSR---LHDVDIGTCLEVIEHME-E--DQACEFGEKVLSLFHPKLLIVSTPNY 837 (950)
T ss_dssp -ESCTTSCCTT---SCSCCEEEEESCGGGSC-H--HHHHHHHHHHHHTTCCSEEEEEECBG
T ss_pred -ECchHhCCcc---cCCeeEEEEeCchhhCC-h--HHHHHHHHHHHHHcCCCEEEEEecCc
Confidence 3344444331 1222455544 456642 1 112235544 6889999777766543
No 8
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=93.45 E-value=0.15 Score=49.20 Aligned_cols=111 Identities=20% Similarity=0.145 Sum_probs=60.6
Q ss_pred HHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecccc
Q 014896 139 QEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAEK 216 (416)
Q Consensus 139 LeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~~ 216 (416)
++.+.-.+..+|+|+|.+.| .+...|+.+. |.+++|+++. ...++.+.+++. ..|+. .+|..-.
T Consensus 162 ~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~d-- 227 (332)
T 3i53_A 162 AAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDL-QGPASAAHRRFL----DTGLSGRAQVVVGS-- 227 (332)
T ss_dssp GGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEECC--
T ss_pred HHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecC-HHHHHHHHHhhh----hcCcCcCeEEecCC--
Confidence 33333344679999999999 3444555442 5679999988 666777666554 34543 5665421
Q ss_pred ccccCccccccCCCceEEE-eeecccccccCCCchHHHHHH-HhcCCcEE-EEeccCC
Q 014896 217 VGNLDPERLNISKREAVAV-HWLQHSLYDVTGSDTNTLCLL-QRLAPKVV-TVVEQDL 271 (416)
Q Consensus 217 ~e~l~~~~l~~~~~EalaV-n~l~h~l~~~~~~~~~~L~~i-r~L~P~vv-tlvE~ea 271 (416)
+. ++ +.. .-+++.. |.+||. .+ .....+|+.+ +.|+|.-. +++|.-.
T Consensus 228 ~~--~~--~p~-~~D~v~~~~vlh~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 228 FF--DP--LPA-GAGGYVLSAVLHDW-DD--LSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp TT--SC--CCC-SCSEEEEESCGGGS-CH--HHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CC--CC--CCC-CCcEEEEehhhccC-CH--HHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 11 11 111 2234443 445443 11 0124566654 67899744 4566533
No 9
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=93.40 E-value=0.53 Score=46.16 Aligned_cols=159 Identities=16% Similarity=0.195 Sum_probs=86.3
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEe
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCP 212 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~ 212 (416)
..+.|++++.-...-+|||+|-+.|. ++.+|+++. |.+|+|..+.|. .++.+.+++. .-+. ..+|.+
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~-v~~~a~~~~~----~~~~~rv~~~~ 234 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPE-VVWTAKQHFS----FQEEEQIDFQE 234 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHH-HHHHHHHHSC----C--CCSEEEEE
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHH-HHHHHHHhhh----hcccCceeeec
Confidence 34678887765555689999999985 555666553 788999988753 3444443331 1112 244543
Q ss_pred ccccccccCccccccCCCceEEEeeecccccccCCC-chHHHHHH-HhcCCcE-EEEeccCCCC--CCChhHHHHHHHHH
Q 014896 213 VAEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGS-DTNTLCLL-QRLAPKV-VTVVEQDLSP--AGSFLGRFVEAIHY 287 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~-~~~~L~~i-r~L~P~v-vtlvE~ea~~--~~~F~~RF~eaL~y 287 (416)
- |+-.. .....+++....+ +++.++. ...+|+.+ +.|+|.- ++|+|.-.+. ..+...
T Consensus 235 g-----D~~~~--~~~~~D~~~~~~v---lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~-------- 296 (353)
T 4a6d_A 235 G-----DFFKD--PLPEADLYILARV---LHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLT-------- 296 (353)
T ss_dssp S-----CTTTS--CCCCCSEEEEESS---GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHH--------
T ss_pred C-----ccccC--CCCCceEEEeeee---cccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHH--------
Confidence 1 11101 1123345444333 2333222 23456664 6799974 5667754432 122211
Q ss_pred HHHHHHhhhccCCCCCHHHHHHHHHHHHHHHhhhhhcCCCCcccccccccHHHHHHcCCCccccC
Q 014896 288 YSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQRSGFKGISL 352 (416)
Q Consensus 288 YsalFDsLda~~~~~~~eR~~~E~~~l~~eI~niVa~eG~~R~ere~~~~W~~rm~~aGF~~~~l 352 (416)
++||. .=.+.+.|.+| +..+|+..++.|||+.+.+
T Consensus 297 --~~~dl------------------------~ml~~~~g~er----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 297 --QLYSL------------------------NMLVQTEGQER----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp --HHHHH------------------------HHHHSSSCCCC----CHHHHHHHHHHHTCEEEEE
T ss_pred --HHHHH------------------------HHHHhCCCcCC----CHHHHHHHHHHCCCceEEE
Confidence 11211 00133456666 3578999999999987765
No 10
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=93.35 E-value=0.32 Score=47.89 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=64.3
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC--CeEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL--PFEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv--pFeF~~v 213 (416)
..|++.+.-.+..+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++. ..|+ ..+|..-
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~l~~~v~~~~~ 259 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLER-PPVAEEARELLT----GRGLADRCEILPG 259 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcC-HHHHHHHHHhhh----hcCcCCceEEecc
Confidence 456666655667899999999996 444555442 5689999998 666777666554 3444 2555542
Q ss_pred cccccccCccccccCCCceEEE-eeecccccccCCCchHHHHHH-HhcCCcE-EEEeccCCC
Q 014896 214 AEKVGNLDPERLNISKREAVAV-HWLQHSLYDVTGSDTNTLCLL-QRLAPKV-VTVVEQDLS 272 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaV-n~l~h~l~~~~~~~~~~L~~i-r~L~P~v-vtlvE~ea~ 272 (416)
. +.+ .+.. .-+++.. |.+||. .+ .....+|+.+ +.|+|.- ++++|.-..
T Consensus 260 d--~~~----~~p~-~~D~v~~~~vlh~~-~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 260 D--FFE----TIPD-GADVYLIKHVLHDW-DD--DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp C--TTT----CCCS-SCSEEEEESCGGGS-CH--HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred C--CCC----CCCC-CceEEEhhhhhccC-CH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 1 111 1111 2234443 344442 11 0112466654 6689974 455665433
No 11
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=93.23 E-value=1.6 Score=40.07 Aligned_cols=117 Identities=21% Similarity=0.154 Sum_probs=63.9
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHH------HHHHHHHHHHHHHHHcCCC--e
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSME------ALEATGKRLSDFAEKLGLP--F 208 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~------~l~~tg~rL~~~A~~lgvp--F 208 (416)
.|++.+.-...-+|+|+|.|.|.- ...|+.+. .|..++|||+.+.. .++.+.+++. ..|++ .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~v 103 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDRL 103 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGGE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCce
Confidence 566666545566899999988753 33444332 24468999998765 5666665543 34442 4
Q ss_pred EEEeccccccccCccccccC--CCceEEEe-eecccccccCCCchHHHHHHHhcCC-c-EEEEeccCCC
Q 014896 209 EFCPVAEKVGNLDPERLNIS--KREAVAVH-WLQHSLYDVTGSDTNTLCLLQRLAP-K-VVTVVEQDLS 272 (416)
Q Consensus 209 eF~~v~~~~e~l~~~~l~~~--~~EalaVn-~l~h~l~~~~~~~~~~L~~ir~L~P-~-vvtlvE~ea~ 272 (416)
+|.... ++....+... .=++++.+ .++|. . ....++..++.+.| . .+++.+....
T Consensus 104 ~~~~~d----~~~~~~~~~~~~~fD~v~~~~~l~~~-~----~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 104 TVHFNT----NLSDDLGPIADQHFDRVVLAHSLWYF-A----SANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp EEECSC----CTTTCCGGGTTCCCSEEEEESCGGGS-S----CHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEECC----hhhhccCCCCCCCEEEEEEccchhhC-C----CHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 444321 1111111111 22444444 35553 1 23457777888877 3 5666665544
No 12
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.13 E-value=0.49 Score=41.63 Aligned_cols=112 Identities=16% Similarity=0.092 Sum_probs=66.1
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
..+.|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+.+...++.+.+++. ..|+. ++|.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~~~~~ 98 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKHMNEIALKNIA----DANLNDRIQIV 98 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHHHHHHHHHHHH----hccccCceEEE
Confidence 34566666665555 99999999885 45555555 45899999999888877766554 34553 4444
Q ss_pred eccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 212 PVAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 212 ~v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
. ..++++... -..=++++.+ .++|. .....+|.. .+.|+|.-.+++.
T Consensus 99 ~--~d~~~~~~~---~~~~D~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 99 Q--GDVHNIPIE---DNYADLIVSRGSVFFW-----EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp E--CBTTBCSSC---TTCEEEEEEESCGGGC-----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred E--cCHHHCCCC---cccccEEEECchHhhc-----cCHHHHHHHHHHhCCCCCEEEEE
Confidence 3 233333211 0111344444 34553 234456655 4679998665543
No 13
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.11 E-value=0.33 Score=44.98 Aligned_cols=105 Identities=27% Similarity=0.267 Sum_probs=58.6
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCcc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPE 223 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~ 223 (416)
...-+|+|+|.+.|. +...|+.+. |..++|||+.+...++.+.+++ +..|++ .+|.. ..+.++...
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~--~d~~~~~~~ 102 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPESLEKARENT----EKNGIKNVKFLQ--ANIFSLPFE 102 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHHHHHHHHHHH----HHTTCCSEEEEE--CCGGGCCSC
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE--cccccCCCC
Confidence 345689999999884 344555442 4468999999988777766554 344554 44443 223332211
Q ss_pred ccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEE-EEeccC
Q 014896 224 RLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVV-TVVEQD 270 (416)
Q Consensus 224 ~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vv-tlvE~e 270 (416)
-..=+.++.+ .++|+ . ....+|.. .+-|+|.-+ ++++.+
T Consensus 103 ---~~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 103 ---DSSFDHIFVCFVLEHL-Q----SPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp ---TTCEEEEEEESCGGGC-S----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CCCeeEEEEechhhhc-C----CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 1111344444 34453 1 23456655 467999855 455544
No 14
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=92.78 E-value=0.64 Score=43.38 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=60.2
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVA 214 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~ 214 (416)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|. .
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s~~~~~~a~~~~----~~~~~~~~~~~~--~ 120 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLSKNQANHVQQLV----ANSENLRSKRVL--L 120 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHH----HTCCCCSCEEEE--E
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECCHHHHHHHHHHH----HhcCCCCCeEEE--E
Confidence 34555544456689999988765 4445553332 28999999988777766654 334543 4443 2
Q ss_pred ccccccCccccccCCCceEE-EeeecccccccCCCchHHHHH-HHhcCCcEEEE
Q 014896 215 EKVGNLDPERLNISKREAVA-VHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTV 266 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~Eala-Vn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtl 266 (416)
..++++. ..=++++ .+.++|+. ......+|.. .+-|+|.-.++
T Consensus 121 ~d~~~~~------~~fD~v~~~~~l~~~~---~~~~~~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 121 AGWEQFD------EPVDRIVSIGAFEHFG---HERYDAFFSLAHRLLPADGVML 165 (287)
T ss_dssp SCGGGCC------CCCSEEEEESCGGGTC---TTTHHHHHHHHHHHSCTTCEEE
T ss_pred CChhhCC------CCeeEEEEeCchhhcC---hHHHHHHHHHHHHhcCCCCEEE
Confidence 2333332 1223333 34456642 1234556655 46799985443
No 15
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=91.98 E-value=0.93 Score=41.58 Aligned_cols=106 Identities=9% Similarity=0.115 Sum_probs=62.4
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAE 215 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~ 215 (416)
.|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+...++.+.+++ +..|++ ++|.. .
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~~l~~a~~~~----~~~~~~~v~~~~--~ 92 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTEDILKVARAFI----EGNGHQQVEYVQ--G 92 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHH----HHTTCCSEEEEE--C
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHHHHHHHHHHH----HhcCCCceEEEE--e
Confidence 45555554556689999999885 555666653 2 8999999988887776554 344554 55543 2
Q ss_pred cccccCccccccCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 216 KVGNLDPERLNISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..+++. ..++ ++++.+ .++|. . +...+|.. .+-|+|.-.+++
T Consensus 93 d~~~l~-----~~~~~fD~V~~~~~l~~~-~----d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 93 DAEQMP-----FTDERFHIVTCRIAAHHF-P----NPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp CC-CCC-----SCTTCEEEEEEESCGGGC-S----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cHHhCC-----CCCCCEEEEEEhhhhHhc-C----CHHHHHHHHHHHcCCCCEEEE
Confidence 333332 1222 444444 35554 2 23455654 577999855443
No 16
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.69 E-value=1.3 Score=41.67 Aligned_cols=111 Identities=9% Similarity=0.036 Sum_probs=63.0
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVA 214 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~ 214 (416)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|..
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~-- 128 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSENQYAHDKAMF----DEVDSPRRKEVRI-- 128 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCHHHHHHHHHHH----HHSCCSSCEEEEE--
T ss_pred HHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCHHHHHHHHHHH----HhcCCCCceEEEE--
Confidence 45666554566789999998774 4445554422 58999999988887776664 345665 44432
Q ss_pred ccccccCccccccCCCceEEE-eeecccccc----cCCCchHHHHH-HHhcCCcEEEEe
Q 014896 215 EKVGNLDPERLNISKREAVAV-HWLQHSLYD----VTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaV-n~l~h~l~~----~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..+.++ . ..=++++. +.++|+... .......+|.. .+-|+|.-.+++
T Consensus 129 ~d~~~~-----~-~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 129 QGWEEF-----D-EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp CCGGGC-----C-CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred CCHHHc-----C-CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 233333 1 12234444 445665221 00112455654 477999855443
No 17
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=91.41 E-value=0.37 Score=44.20 Aligned_cols=101 Identities=11% Similarity=-0.004 Sum_probs=59.7
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccccc
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNI 227 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~~ 227 (416)
=+|+|+|.|.| +|--.++.. .|..++++++-+...++-+.++ |+..|+...+.. .+..+. .. -
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~~~leiar~~----~~~~g~~~~v~~-~d~~~~----~~-~ 113 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDRAEIAFLSSI----IGKLKTTIKYRF-LNKESD----VY-K 113 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCHHHHHHHHHH----HHHSCCSSEEEE-ECCHHH----HT-T
T ss_pred CeEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCHHHHHHHHHH----HHhcCCCccEEE-eccccc----CC-C
Confidence 37899987744 555555544 3666999999998888777665 466788754433 111111 10 1
Q ss_pred CC-CceEEEeeecccccccCCCchHHHHHHHhcCCcEEEEecc
Q 014896 228 SK-REAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQ 269 (416)
Q Consensus 228 ~~-~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE~ 269 (416)
.+ |=+++-|.+||+ .+..+ ...+.++.|+|..++|.=+
T Consensus 114 ~~~DvVLa~k~LHlL-~~~~~---al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVL-KQQDV---NILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp SEEEEEEEETCHHHH-HHTTC---CHHHHHHTCEEEEEEEEEE
T ss_pred CCcChhhHhhHHHhh-hhhHH---HHHHHHHHhCCCCEEEEeC
Confidence 12 234444555554 44333 3345667999997777554
No 18
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=91.34 E-value=0.4 Score=46.46 Aligned_cols=117 Identities=12% Similarity=0.056 Sum_probs=62.5
Q ss_pred HHHHhhhcCC-eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec
Q 014896 137 AIQEAFERED-RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV 213 (416)
Q Consensus 137 aILeA~~g~~-~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v 213 (416)
.|++.+.-.+ ..+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++ +..++. ++|..-
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~v~~~~~ 236 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDL-PTTRDAARKTI----HAHDLGGRVEFFEK 236 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-GGGHHHHHHHH----HHTTCGGGEEEEEC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEEC-HHHHHHHHHHH----HhcCCCCceEEEeC
Confidence 6777776555 8899999999886 444554442 5589999988 44555555444 334543 555432
Q ss_pred cccccccCccccccCCCceEEEe-eecccccccCCCchHHHHHH-HhcCCcEE-EEeccCCC
Q 014896 214 AEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCLL-QRLAPKVV-TVVEQDLS 272 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~i-r~L~P~vv-tlvE~ea~ 272 (416)
++.+..+ .+ ...-++++.+ .+||. .+ .....+|..+ +.|+|.-. +++|.-.+
T Consensus 237 --d~~~~~~-~~-~~~~D~v~~~~vlh~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 237 --NLLDARN-FE-GGAADVVMLNDCLHYF-DA--REAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp --CTTCGGG-GT-TCCEEEEEEESCGGGS-CH--HHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred --CcccCcc-cC-CCCccEEEEecccccC-CH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 1222110 00 0112344433 34442 11 1124566654 67899754 45664333
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=91.25 E-value=0.55 Score=41.73 Aligned_cols=54 Identities=17% Similarity=0.148 Sum_probs=39.5
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
-..+++.+.....-.|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.+++
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~ 87 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-----GRTVYGIEPSREMRMIAKEKL 87 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-----TCEEEEECSCHHHHHHHHHHS
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-----CCeEEEEeCCHHHHHHHHHhC
Confidence 3567777776677799999999884 55556655 248999999988776665543
No 20
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=91.14 E-value=1 Score=40.96 Aligned_cols=112 Identities=21% Similarity=0.212 Sum_probs=62.5
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEe
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCP 212 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~ 212 (416)
-..|++.+.-...-+|+|+|.|.|..- ..|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|..
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~----~~la~~~~----~~v~gvD~s~~~l~~a~~~~----~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEML----CTWARDHG----ITGTGIDMSSLFTAQAKRRA----EELGVSERVHFIH 92 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHH----HHHHHHTC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHH----HHHHHhcC----CeEEEEeCCHHHHHHHHHHH----HhcCCCcceEEEE
Confidence 345555554445568999999988633 34443332 36899999988887766554 445664 66653
Q ss_pred ccccccccCccccccCCCceEEE-eeecccccccCCCchHHHHHH-HhcCCcEEE-Eecc
Q 014896 213 VAEKVGNLDPERLNISKREAVAV-HWLQHSLYDVTGSDTNTLCLL-QRLAPKVVT-VVEQ 269 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaV-n~l~h~l~~~~~~~~~~L~~i-r~L~P~vvt-lvE~ 269 (416)
..++++... ..=++++. +.++|. .....+|..+ +-|+|.-.+ +.+.
T Consensus 93 --~d~~~~~~~----~~fD~V~~~~~~~~~-----~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 93 --NDAAGYVAN----EKCDVAACVGATWIA-----GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp --SCCTTCCCS----SCEEEEEEESCGGGT-----SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred --CChHhCCcC----CCCCEEEECCChHhc-----CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 233333210 11133333 334543 1345666554 668998554 4443
No 21
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=90.96 E-value=0.41 Score=45.19 Aligned_cols=52 Identities=10% Similarity=0.071 Sum_probs=36.4
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
....+|+|+|.|.|.--..++..|+.+..+ -.+.+|||+++.+.++.+.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~ml~~a~~~~ 102 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAEQIAKYKELV 102 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHHHHHHHHHHH
Confidence 457799999999995444567777654211 1234599999998888777665
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=90.79 E-value=0.6 Score=41.63 Aligned_cols=116 Identities=19% Similarity=0.231 Sum_probs=66.0
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC------CeE
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL------PFE 209 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv------pFe 209 (416)
+.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++|||+.+...++.+.+++.. .++ .++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~~~v~ 87 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYSVLERAKDRLKI----DRLPEMQRKRIS 87 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHHHHHHHHHHHTG----GGSCHHHHTTEE
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHHHh----hccccccCcceE
Confidence 445555555556689999999885 555666552 457999999998888877766532 222 244
Q ss_pred EEeccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEeccC
Q 014896 210 FCPVAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQD 270 (416)
Q Consensus 210 F~~v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~e 270 (416)
|..- .++.+... ...=++++.+ .++|+ .+ .....+|.. .+.|+|..+++....
T Consensus 88 ~~~~--d~~~~~~~---~~~fD~V~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 88 LFQS--SLVYRDKR---FSGYDAATVIEVIEHL-DE--NRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EEEC--CSSSCCGG---GTTCSEEEEESCGGGC-CH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEeC--cccccccc---cCCCCEEEEHHHHHhC-CH--HHHHHHHHHHHHhhCCCEEEEEccc
Confidence 4321 22222211 1122344433 45554 11 112355654 467999977665554
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=90.36 E-value=0.63 Score=42.43 Aligned_cols=66 Identities=12% Similarity=0.251 Sum_probs=43.6
Q ss_pred CCccchhHHHHhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 124 SPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 124 ~P~~kfa~~taNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
..++.-+.......+++.+.-...-+|+|+|.|.|.- ...|+.+.+ .++|||+.+...++.+.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~----~~~l~~~~~----~~v~~vD~s~~~~~~a~~~~ 98 (266)
T 3ujc_A 33 ENYISSGGLEATKKILSDIELNENSKVLDIGSGLGGG----CMYINEKYG----AHTHGIDICSNIVNMANERV 98 (266)
T ss_dssp TTCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEESCHHHHHHHHHTC
T ss_pred CCccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHHcC----CEEEEEeCCHHHHHHHHHHh
Confidence 3444555555567777777656677999999998853 333443321 48999999987776655443
No 24
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=90.19 E-value=0.64 Score=45.79 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=57.4
Q ss_pred HHHHHhhh-cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecc
Q 014896 136 QAIQEAFE-REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVA 214 (416)
Q Consensus 136 qaILeA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~ 214 (416)
..|++.+. -...-+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+ +.. -..+|..-
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a--------~~~-~~v~~~~~- 253 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDL-PHVIQDA--------PAF-SGVEHLGG- 253 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHTTC--------CCC-TTEEEEEC-
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeh-HHHHHhh--------hhc-CCCEEEec-
Confidence 34666665 2456799999999886 344444442 6789999997 3333322 211 12444421
Q ss_pred ccccccCccccccCCCceEEEee-ecccccccCCCchHHHHHH-HhcCCcE-EEEeccCCC
Q 014896 215 EKVGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCLL-QRLAPKV-VTVVEQDLS 272 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~i-r~L~P~v-vtlvE~ea~ 272 (416)
...+ .+ ..+++++.+. +||. .+ .....+|..+ +.|+|.- ++++|.-..
T Consensus 254 -d~~~----~~--p~~D~v~~~~vlh~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 254 -DMFD----GV--PKGDAIFIKWICHDW-SD--EHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp -CTTT----CC--CCCSEEEEESCGGGB-CH--HHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred -CCCC----CC--CCCCEEEEechhhcC-CH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 1211 11 1235555544 4432 21 1123566654 6799984 556665443
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=90.11 E-value=1 Score=39.99 Aligned_cols=114 Identities=24% Similarity=0.332 Sum_probs=64.5
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC------eEE
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP------FEF 210 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp------FeF 210 (416)
.|++.+.....-.|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++ +..|++ ++|
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~v~~ 88 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYRSLEIAQERL----DRLRLPRNQWERLQL 88 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHHHHHHHHHHH----TTCCCCHHHHTTEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHHHHHHHHHHH----HHhcCCcccCcceEE
Confidence 44455554455689999999885 455566552 3469999999988887777664 233442 444
Q ss_pred EeccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEecc
Q 014896 211 CPVAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQ 269 (416)
Q Consensus 211 ~~v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ 269 (416)
.. ..+..+... ...=++++.+ .++|+ .+ .....+|.. .+.|+|..++++..
T Consensus 89 ~~--~d~~~~~~~---~~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 89 IQ--GALTYQDKR---FHGYDAATVIEVIEHL-DL--SRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EE--CCTTSCCGG---GCSCSEEEEESCGGGC-CH--HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred Ee--CCccccccc---CCCcCEEeeHHHHHcC-CH--HHHHHHHHHHHHHcCCCEEEEEcc
Confidence 43 222222211 1222444444 45554 11 112456655 46689998766554
No 26
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=89.51 E-value=1.5 Score=41.42 Aligned_cols=105 Identities=16% Similarity=0.062 Sum_probs=57.8
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEeccccccccCc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAEKVGNLDP 222 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~~~e~l~~ 222 (416)
...-+|+|+|.|.|. +...|+.+ ..|..++|||+.+...++.+.+++ +..|++ .+|.. ..+.++..
T Consensus 117 ~~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~--~d~~~~~~ 184 (305)
T 3ocj_A 117 RPGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPEALDGATRLA----AGHALAGQITLHR--QDAWKLDT 184 (305)
T ss_dssp CTTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHHHHHHHHHHH----TTSTTGGGEEEEE--CCGGGCCC
T ss_pred CCCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHHHHHHHHHHH----HhcCCCCceEEEE--CchhcCCc
Confidence 345579999999884 34445422 235679999999988777766554 445655 55543 23333321
Q ss_pred cccccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 223 ERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 223 ~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
. ..=++++.|. ++|. .+. .....+|.. .+.|+|.-.+++
T Consensus 185 ---~-~~fD~v~~~~~~~~~-~~~-~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 185 ---R-EGYDLLTSNGLNIYE-PDD-ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp ---C-SCEEEEECCSSGGGC-CCH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---c-CCeEEEEECChhhhc-CCH-HHHHHHHHHHHHhcCCCeEEEE
Confidence 1 1223444443 4443 111 111235555 467999866554
No 27
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=89.36 E-value=0.54 Score=46.31 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=30.0
Q ss_pred HHHHHhhh-cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCC
Q 014896 136 QAIQEAFE-REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT 185 (416)
Q Consensus 136 qaILeA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~ 185 (416)
..|++.+. -...-+|+|+|.+.|.- ...|+.+. |.+++|+++.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~ 233 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGAT----VAAIAAHY---PTIKGVNFDL 233 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHH----HHHHHHHC---CCCeEEEecC
Confidence 45677666 34568999999999864 34444332 6678999998
No 28
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=88.64 E-value=2.2 Score=36.78 Aligned_cols=109 Identities=14% Similarity=0.042 Sum_probs=61.9
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEec
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCPV 213 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~v 213 (416)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.+ .++ ..+|...
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~~ 87 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAMSIANVERIKSI----ENLDNLHTRVV 87 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHHH----HTCTTEEEEEC
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHHh----CCCCCcEEEEc
Confidence 3466777665555599999999886 34455555 2 3899999998877777665443 344 3444432
Q ss_pred cccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE
Q 014896 214 AEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT 265 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt 265 (416)
.+.++.. -..=++++.+ .++|+- ......+|.. .+.|+|.-.+
T Consensus 88 --d~~~~~~----~~~~D~v~~~~~l~~~~---~~~~~~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 88 --DLNNLTF----DRQYDFILSTVVLMFLE---AKTIPGLIANMQRCTKPGGYN 132 (199)
T ss_dssp --CGGGCCC----CCCEEEEEEESCGGGSC---GGGHHHHHHHHHHTEEEEEEE
T ss_pred --chhhCCC----CCCceEEEEcchhhhCC---HHHHHHHHHHHHHhcCCCeEE
Confidence 2333221 0111344444 355531 1233455655 4678998653
No 29
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=88.63 E-value=1.4 Score=43.52 Aligned_cols=145 Identities=14% Similarity=0.148 Sum_probs=79.0
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVA 214 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~ 214 (416)
+|++...-.+.-.|+|+|.|.| .+...++.+ |. -++|||+.+ ..++.+.+ .++..|++ .+|. .
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~~~~~a~~----~~~~~~~~~~v~~~--~ 118 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-KMADHARA----LVKANNLDHIVEVI--E 118 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-TTHHHHHH----HHHHTTCTTTEEEE--E
T ss_pred HHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-HHHHHHHH----HHHHcCCCCeEEEE--E
Confidence 3444333345568999999988 344455555 22 289999998 66655543 34556665 4443 3
Q ss_pred ccccccCccccccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEEeccCCCC-----CCChh---HHHHHHH
Q 014896 215 EKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVEQDLSP-----AGSFL---GRFVEAI 285 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE~ea~~-----~~~F~---~RF~eaL 285 (416)
..++++... ..=++++.+++.|.+.. ......++..+ +-|+|.-+++...-.-+ ...+. ..|.+.+
T Consensus 119 ~d~~~~~~~----~~~D~Iv~~~~~~~l~~-e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (376)
T 3r0q_C 119 GSVEDISLP----EKVDVIISEWMGYFLLR-ESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAM 193 (376)
T ss_dssp SCGGGCCCS----SCEEEEEECCCBTTBTT-TCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHHHHHHHH
T ss_pred CchhhcCcC----CcceEEEEcChhhcccc-hHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhhhhhhhh
Confidence 344444321 22345656666554432 23455677766 88999977665432111 12222 1345555
Q ss_pred HHHHHHHHhhhccCCC
Q 014896 286 HYYSALFDSLGASYGE 301 (416)
Q Consensus 286 ~yYsalFDsLda~~~~ 301 (416)
..+..+++..+...+-
T Consensus 194 ~~W~~fw~~~~~~~G~ 209 (376)
T 3r0q_C 194 ADWHNFSDEIKSYYGV 209 (376)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred hhhhhhhhccCccccC
Confidence 5555666554444443
No 30
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=88.44 E-value=1.8 Score=40.34 Aligned_cols=108 Identities=10% Similarity=0.006 Sum_probs=64.7
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccc
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAE 215 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~ 215 (416)
..+++.+.....-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++ +..|+..+|.. .
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~--~ 174 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNENSIAFLNETK----EKENLNISTAL--Y 174 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHH----HHTTCCEEEEE--C
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHHHHHHHHHHH----HHcCCceEEEE--e
Confidence 466777766677789999999885 44556655 2 38999999988887766554 34566555553 2
Q ss_pred cccccCccccccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEE
Q 014896 216 KVGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVT 265 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvt 265 (416)
.+.++.. -..=++++.+. ++|+ . ......+|.. .+.|+|.-++
T Consensus 175 d~~~~~~----~~~fD~i~~~~~~~~~-~--~~~~~~~l~~~~~~LkpgG~l 219 (286)
T 3m70_A 175 DINAANI----QENYDFIVSTVVFMFL-N--RERVPSIIKNMKEHTNVGGYN 219 (286)
T ss_dssp CGGGCCC----CSCEEEEEECSSGGGS-C--GGGHHHHHHHHHHTEEEEEEE
T ss_pred ccccccc----cCCccEEEEccchhhC-C--HHHHHHHHHHHHHhcCCCcEE
Confidence 3333322 11124454443 4543 1 1223356655 4678998653
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=88.39 E-value=2.7 Score=38.66 Aligned_cols=126 Identities=13% Similarity=0.022 Sum_probs=70.9
Q ss_pred HHccCCccchhHHHHhHHHHHhhh-cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 120 FNGISPFVKFSHFTANQAIQEAFE-REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 120 f~~~~P~~kfa~~taNqaILeA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
+|+..+...-.+......+++.+. -...-+|+|+|.|.| .+...|+.+ |..++|||+.+...++.+.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~----~~~~v~gvD~s~~~~~~a~~~~- 89 (267)
T 3kkz_A 19 FFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGH----VTGQVTGLDFLSGFIDIFNRNA- 89 (267)
T ss_dssp HHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTT----CSSEEEEEESCHHHHHHHHHHH-
T ss_pred HHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhc----cCCEEEEEeCCHHHHHHHHHHH-
Confidence 334444433334444445566655 245668999999877 355667766 3468999999988887766654
Q ss_pred HHHHHcCCC--eEEEeccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE-Eec
Q 014896 199 DFAEKLGLP--FEFCPVAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT-VVE 268 (416)
Q Consensus 199 ~~A~~lgvp--FeF~~v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt-lvE 268 (416)
+..|++ .+|.. ..++++... -..=++++.+ .++|. ....+|.. .+-|+|.-++ +.+
T Consensus 90 ---~~~~~~~~v~~~~--~d~~~~~~~---~~~fD~i~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 90 ---RQSGLQNRVTGIV--GSMDDLPFR---NEELDLIWSEGAIYNI------GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp ---HHTTCTTTEEEEE--CCTTSCCCC---TTCEEEEEESSCGGGT------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ---HHcCCCcCcEEEE--cChhhCCCC---CCCEEEEEEcCCceec------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 445665 55543 233333211 1111344333 34553 23456655 4679998554 444
No 32
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=87.70 E-value=0.9 Score=40.49 Aligned_cols=118 Identities=19% Similarity=0.149 Sum_probs=63.6
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAE 215 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~ 215 (416)
..++.+.....-+|+|+|.|.|.- ...|+.+. |..++|||+.+...++.+.++..+-++..+++ .+|.. .
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~--~ 88 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKH----PYKVARQN---PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLW--A 88 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHH----HHHHHHHC---TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEE--C
T ss_pred HHHHHhhccCCCEEEEecCCCCHH----HHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEe--c
Confidence 344555556677899999998853 33444431 55799999999887776555544444456664 55543 2
Q ss_pred cccccCccccccCCCceEEEeeeccccc-ccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 216 KVGNLDPERLNISKREAVAVHWLQHSLY-DVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn~l~h~l~-~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..+++... -.. +.+.+..-.+.+. ........+|.. .+-|+|.-.+++
T Consensus 89 d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 89 TAERLPPL---SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp CSTTCCSC---CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred chhhCCCC---CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 34443321 111 3333322110000 001123456655 477999877655
No 33
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=87.61 E-value=1.7 Score=39.96 Aligned_cols=109 Identities=19% Similarity=0.239 Sum_probs=61.2
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v 213 (416)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|..
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~~- 117 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISISRPQVNQANARA----TAAGLANRVTFSY- 117 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEEE-
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCCHHHHHHHHHHH----HhcCCCcceEEEE-
Confidence 345555544456699999998875 3344444332 58999999988777666554 345554 55543
Q ss_pred cccccccCccccccCCC--ceEEE-eeecccccccCCCchHHHHHH-HhcCCcEEE-Eec
Q 014896 214 AEKVGNLDPERLNISKR--EAVAV-HWLQHSLYDVTGSDTNTLCLL-QRLAPKVVT-VVE 268 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~--EalaV-n~l~h~l~~~~~~~~~~L~~i-r~L~P~vvt-lvE 268 (416)
....++. ..++ ++++. +.++|. .....+|..+ +-|+|.-.+ +.+
T Consensus 118 -~d~~~~~-----~~~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 118 -ADAMDLP-----FEDASFDAVWALESLHHM-----PDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp -CCTTSCC-----SCTTCEEEEEEESCTTTS-----SCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -CccccCC-----CCCCCccEEEEechhhhC-----CCHHHHHHHHHHHcCCCeEEEEEE
Confidence 2233332 1122 33333 345554 2235666654 668998544 444
No 34
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=87.52 E-value=1.5 Score=41.52 Aligned_cols=120 Identities=12% Similarity=0.096 Sum_probs=62.0
Q ss_pred HHHHhhhcC--CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHH----cCCCeEE
Q 014896 137 AIQEAFERE--DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEK----LGLPFEF 210 (416)
Q Consensus 137 aILeA~~g~--~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~----lgvpFeF 210 (416)
.+++.+... +.-+|+|+|.|.|.- ...|+.++ .-++|||+.+...++.+.+++...... ....++|
T Consensus 23 ~~~~~l~~~~~~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 94 (313)
T 3bgv_A 23 EFLEKVRQKKKRDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEF 94 (313)
T ss_dssp HHHHHHHHTC--CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEE
T ss_pred HHHHHhhhccCCCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEE
Confidence 344444333 566899999998863 33444332 348999999998888888776543211 1112333
Q ss_pred EeccccccccCcc-ccccC--CCceEEEee-ecccccccCCCchHHHHHH-HhcCCcEEEEe
Q 014896 211 CPVAEKVGNLDPE-RLNIS--KREAVAVHW-LQHSLYDVTGSDTNTLCLL-QRLAPKVVTVV 267 (416)
Q Consensus 211 ~~v~~~~e~l~~~-~l~~~--~~EalaVn~-l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlv 267 (416)
. ...++++... .+.-. .=+.|+.+. +||...+. .....+|..+ +.|+|.-++++
T Consensus 95 ~--~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 95 I--TADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY-EQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp E--ECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH-HHHHHHHHHHHTTEEEEEEEEE
T ss_pred E--EecccccchhhhcccCCCCEEEEEEecchhhccCCH-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3 3333333210 11111 114444443 44432221 1223566554 67899866544
No 35
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=87.30 E-value=2.3 Score=39.48 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=57.9
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccc
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAE 215 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~ 215 (416)
+.+++.+.-...-.|+|+|.|.|.-- ..|+. |..++|||+.+...++.+.+++ -++.| .. .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~----~~l~~-----~~~~v~gvD~s~~~~~~a~~~~------~~~~~--~~--~ 107 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLT----EKIAQ-----SGAEVLGTDNAATMIEKARQNY------PHLHF--DV--A 107 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHH----HHHHH-----TTCEEEEEESCHHHHHHHHHHC------TTSCE--EE--C
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHH----HHHHh-----CCCeEEEEECCHHHHHHHHhhC------CCCEE--EE--C
Confidence 34566665555668999999988633 34443 2358999999988777665543 13333 22 1
Q ss_pred cccccCccccccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 216 KVGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..+++... ..=++++.+. ++|+ . ....+|.. .+-|+|.-.+++
T Consensus 108 d~~~~~~~----~~fD~v~~~~~l~~~-~----d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 108 DARNFRVD----KPLDAVFSNAMLHWV-K----EPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp CTTTCCCS----SCEEEEEEESCGGGC-S----CHHHHHHHHHHHEEEEEEEEE
T ss_pred ChhhCCcC----CCcCEEEEcchhhhC-c----CHHHHHHHHHHhcCCCcEEEE
Confidence 23333210 1113444443 4443 2 33456654 477899865444
No 36
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=87.15 E-value=7 Score=32.89 Aligned_cols=61 Identities=15% Similarity=0.059 Sum_probs=42.8
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP 207 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp 207 (416)
+.+++.+.-...-+|+|+|.|.|. +...|+.+. |..++|+|+.+...++.+.+++. ..|++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~~~~~~a~~~~~----~~~~~ 75 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEISEERRERILSNAI----NLGVS 75 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECSCHHHHHHHHHHHH----TTTCT
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeCCHHHHHHHHHHHH----HhCCC
Confidence 445566655566789999998873 445556553 56899999999888877766553 45665
No 37
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=87.11 E-value=4.7 Score=37.87 Aligned_cols=70 Identities=14% Similarity=0.030 Sum_probs=41.6
Q ss_pred HHccCCccchhHHHHhHHHHHh----hhcC-CeeEEeeccccC---ccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHH
Q 014896 120 FNGISPFVKFSHFTANQAIQEA----FERE-DRVHIIDLDIMQ---GLQWPGLFHILASRPGGPPYVRLTGLGTSMEALE 191 (416)
Q Consensus 120 f~~~~P~~kfa~~taNqaILeA----~~g~-~~VHIIDf~i~~---G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~ 191 (416)
+.+..|-+. .....|+..++. +... ..-+|+|+|.|. |. ...+++... |..++|+|+.+...++
T Consensus 47 ~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~~------p~~~v~~vD~sp~~l~ 118 (274)
T 2qe6_A 47 ACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSVN------PDARVVYVDIDPMVLT 118 (274)
T ss_dssp HHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHHC------TTCEEEEEESSHHHHH
T ss_pred HHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHhC------CCCEEEEEECChHHHH
Confidence 444445432 223455555543 3322 234899999998 73 333333321 4579999999988888
Q ss_pred HHHHHH
Q 014896 192 ATGKRL 197 (416)
Q Consensus 192 ~tg~rL 197 (416)
.+.+++
T Consensus 119 ~Ar~~~ 124 (274)
T 2qe6_A 119 HGRALL 124 (274)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 777766
No 38
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=86.84 E-value=5.5 Score=35.92 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=65.3
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEe
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCP 212 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~ 212 (416)
.+.-+++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+...++.+.+++. ..|++ ++|..
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~~~~~a~~~~~----~~~~~~v~~~~ 75 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKEMVEVASSFAQ----EKGVENVRFQQ 75 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHHH----HHTCCSEEEEE
T ss_pred CcchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHHHHHHHHHHHH----HcCCCCeEEEe
Confidence 34445666666667789999999885 444566542 2 89999999887777666543 34554 44442
Q ss_pred ccccccccCccccccCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE-EeccC
Q 014896 213 VAEKVGNLDPERLNISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT-VVEQD 270 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt-lvE~e 270 (416)
..++++. ..++ +.++.+ .++|. . ....+|.. .+-|+|.-.+ +++..
T Consensus 76 --~d~~~~~-----~~~~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 76 --GTAESLP-----FPDDSFDIITCRYAAHHF-S----DVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp --CBTTBCC-----SCTTCEEEEEEESCGGGC-S----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --cccccCC-----CCCCcEEEEEECCchhhc-c----CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 2333332 1222 344444 35553 1 23455654 4779998554 44543
No 39
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=86.52 E-value=1.3 Score=39.05 Aligned_cols=55 Identities=25% Similarity=0.369 Sum_probs=41.3
Q ss_pred HHhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 133 TANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 133 taNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
...+.|++.+.....-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR-G----IEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCHHHHHHHHHT
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC-C----CEEEEEcCCHHHHHHHHHh
Confidence 356778888887777899999999883 55666666 2 3899999998777665544
No 40
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=86.26 E-value=1.9 Score=40.81 Aligned_cols=101 Identities=16% Similarity=0.092 Sum_probs=61.8
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLN 226 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~ 226 (416)
--.|+|+|.|.|. | +++-+ |..++++++-+...++-+. +++...|+++.|.... +....+
T Consensus 106 p~~VLDlGCG~gp----L--al~~~----~~~~y~a~DId~~~i~~ar----~~~~~~g~~~~~~v~D-----~~~~~~- 165 (253)
T 3frh_A 106 PRRVLDIACGLNP----L--ALYER----GIASVWGCDIHQGLGDVIT----PFAREKDWDFTFALQD-----VLCAPP- 165 (253)
T ss_dssp CSEEEEETCTTTH----H--HHHHT----TCSEEEEEESBHHHHHHHH----HHHHHTTCEEEEEECC-----TTTSCC-
T ss_pred CCeEEEecCCccH----H--HHHhc----cCCeEEEEeCCHHHHHHHH----HHHHhcCCCceEEEee-----cccCCC-
Confidence 4489999998762 1 11111 6789999998887665544 4466678888887532 211111
Q ss_pred cCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEEecc
Q 014896 227 ISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQ 269 (416)
Q Consensus 227 ~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE~ 269 (416)
-.+.+++.++-+.|.|.+. .....++.+..|+|..|+|.=+
T Consensus 166 ~~~~DvvLllk~lh~LE~q--~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 166 AEAGDLALIFKLLPLLERE--QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CCBCSEEEEESCHHHHHHH--STTHHHHHHHHCBCSEEEEEEE
T ss_pred CCCcchHHHHHHHHHhhhh--chhhHHHHHHHhcCCCEEEEcC
Confidence 1245666666544545432 2335557788999987776554
No 41
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=85.95 E-value=3 Score=39.45 Aligned_cols=107 Identities=8% Similarity=0.033 Sum_probs=59.9
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVA 214 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~ 214 (416)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|..
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~-- 146 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSKNQHARCEQVL----ASIDTNRSRQVLL-- 146 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHH----HTSCCSSCEEEEE--
T ss_pred HHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCHHHHHHHHHHH----HhcCCCCceEEEE--
Confidence 44555544456689999998774 3344444422 28999999988777766554 344654 44432
Q ss_pred ccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEE
Q 014896 215 EKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTV 266 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtl 266 (416)
..++++. ..=++++.+ .++|+-. .....+|.. .+-|+|.-.++
T Consensus 147 ~d~~~~~------~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 147 QGWEDFA------EPVDRIVSIEAFEHFGH---ENYDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp SCGGGCC------CCCSEEEEESCGGGTCG---GGHHHHHHHHHHHSCTTCEEE
T ss_pred CChHHCC------CCcCEEEEeChHHhcCH---HHHHHHHHHHHHhcCCCcEEE
Confidence 2333332 122344433 4555411 223456655 46799985443
No 42
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=85.73 E-value=3.5 Score=36.85 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=57.2
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEecc--ccccccC
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVA--EKVGNLD 221 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~--~~~e~l~ 221 (416)
+.-+|+|+|.+.|.-= ..|+.+- +|.-++|+|+.+...++.+.+++. ..|+. ++|..-. ..+..+.
T Consensus 58 ~~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~~~d~~~~l~~~~ 127 (221)
T 3u81_A 58 SPSLVLELGAYCGYSA----VRMARLL--QPGARLLTMEINPDCAAITQQMLN----FAGLQDKVTILNGASQDLIPQLK 127 (221)
T ss_dssp CCSEEEEECCTTSHHH----HHHHTTS--CTTCEEEEEESCHHHHHHHHHHHH----HHTCGGGEEEEESCHHHHGGGTT
T ss_pred CCCEEEEECCCCCHHH----HHHHHhC--CCCCEEEEEeCChHHHHHHHHHHH----HcCCCCceEEEECCHHHHHHHHH
Confidence 3458999999888532 2334321 234699999999888877766554 34553 5554311 1122221
Q ss_pred ccccccCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEEecc
Q 014896 222 PERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQ 269 (416)
Q Consensus 222 ~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE~ 269 (416)
. ......=+.+.++...+... .....+..++-|+|.-+++++.
T Consensus 128 ~-~~~~~~fD~V~~d~~~~~~~----~~~~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 128 K-KYDVDTLDMVFLDHWKDRYL----PDTLLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp T-TSCCCCCSEEEECSCGGGHH----HHHHHHHHTTCCCTTCEEEESC
T ss_pred H-hcCCCceEEEEEcCCcccch----HHHHHHHhccccCCCeEEEEeC
Confidence 1 00001224554443222111 1123444457899998887764
No 43
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=85.65 E-value=0.8 Score=42.76 Aligned_cols=54 Identities=15% Similarity=0.108 Sum_probs=38.8
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
+.|++.+.....-+|+|+|.|.|. +...|+.+ |. ++|||+.+...++.+.+++.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~l~~a~~~~~ 100 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDKMLKYALKERW 100 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHHHHHHHHHhhh
Confidence 455566655566799999999985 34445554 22 89999999988888776653
No 44
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=85.55 E-value=3.3 Score=36.46 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=61.3
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEK 216 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~ 216 (416)
.|.+.+.....-+|+|+|.|.|. +...|+.+ .-++|||+.+...++.+.+++.. .+ .++|.. ..
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~--~d 105 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH-----CKRLTVIDVMPRAIGRACQRTKR----WS-HISWAA--TD 105 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG-----EEEEEEEESCHHHHHHHHHHTTT----CS-SEEEEE--CC
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc-----CCEEEEEECCHHHHHHHHHhccc----CC-CeEEEE--cc
Confidence 33444555677899999999884 45556655 24899999998888777665543 22 344433 23
Q ss_pred ccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 217 VGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 217 ~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
++++.+. ..=++++.+ .++|+. + +.....+|.. .+.|+|.-++++
T Consensus 106 ~~~~~~~----~~fD~v~~~~~l~~~~-~-~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 106 ILQFSTA----ELFDLIVVAEVLYYLE-D-MTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp TTTCCCS----CCEEEEEEESCGGGSS-S-HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhCCCC----CCccEEEEccHHHhCC-C-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 3333211 111344444 355541 1 1111344544 577999866554
No 45
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=85.52 E-value=2.1 Score=38.46 Aligned_cols=99 Identities=16% Similarity=0.057 Sum_probs=54.2
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccccc
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNI 227 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~~ 227 (416)
-.|+|+|.|.|. +...|+. +..++|||+.+...++.+.+++.+.- ..-..+|.. ..+.++.+..
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~--~d~~~~~~~~--- 131 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISESALAKANETYGSSP--KAEYFSFVK--EDVFTWRPTE--- 131 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEEC--CCTTTCCCSS---
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCHHHHHHHHHHhhccC--CCcceEEEE--CchhcCCCCC---
Confidence 499999999884 3345554 34689999999888887766554311 111234432 2233332211
Q ss_pred CCCceEEEe-eecccccccCCCchHHHHHH-HhcCCcEEEE
Q 014896 228 SKREAVAVH-WLQHSLYDVTGSDTNTLCLL-QRLAPKVVTV 266 (416)
Q Consensus 228 ~~~EalaVn-~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtl 266 (416)
.=++++.+ .++|+. ......+|..+ +.|+|.-.++
T Consensus 132 -~fD~v~~~~~l~~~~---~~~~~~~l~~~~~~LkpgG~l~ 168 (235)
T 3lcc_A 132 -LFDLIFDYVFFCAIE---PEMRPAWAKSMYELLKPDGELI 168 (235)
T ss_dssp -CEEEEEEESSTTTSC---GGGHHHHHHHHHHHEEEEEEEE
T ss_pred -CeeEEEEChhhhcCC---HHHHHHHHHHHHHHCCCCcEEE
Confidence 11334333 344431 12344566654 5699986654
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=85.50 E-value=3.5 Score=37.34 Aligned_cols=108 Identities=12% Similarity=0.111 Sum_probs=62.7
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEec
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPV 213 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v 213 (416)
.-+.|++.+...+.-.|+|+|.|.|. +...|+.+ |+. ++|||+.+...++.+.+++. +-..+|...
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~ 97 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSERMLTEAKRKTT------SPVVCYEQK 97 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHHHHHHHHHHCC------CTTEEEEEC
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCHHHHHHHHHhhc------cCCeEEEEc
Confidence 34456666665567789999999884 45556655 222 89999999887776655443 233444432
Q ss_pred cccccccCccccccCCC--ceEEEe-eecccccccCCCchHHHHHH-HhcCCcEEEEe
Q 014896 214 AEKVGNLDPERLNISKR--EAVAVH-WLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVV 267 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlv 267 (416)
.++++. ..++ ++++.+ .++|+ .....+|..+ +-|+|.-.+++
T Consensus 98 --d~~~~~-----~~~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 98 --AIEDIA-----IEPDAYNVVLSSLALHYI-----ASFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp --CGGGCC-----CCTTCEEEEEEESCGGGC-----SCHHHHHHHHHHHEEEEEEEEE
T ss_pred --chhhCC-----CCCCCeEEEEEchhhhhh-----hhHHHHHHHHHHHcCCCcEEEE
Confidence 233332 1122 344433 34553 2345666654 66999866554
No 47
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=85.47 E-value=1.9 Score=41.37 Aligned_cols=141 Identities=14% Similarity=0.123 Sum_probs=74.3
Q ss_pred HHHHHHccCCccchhHHHHhHHHHHhh----hcCCe-eEEeeccccCcc--ccHHHHHHHhcCCCCCCeEEEeecCCCHH
Q 014896 116 AFQVFNGISPFVKFSHFTANQAIQEAF----EREDR-VHIIDLDIMQGL--QWPGLFHILASRPGGPPYVRLTGLGTSME 188 (416)
Q Consensus 116 a~~~f~~~~P~~kfa~~taNqaILeA~----~g~~~-VHIIDf~i~~G~--QWp~LiqaLa~R~ggpP~LRITgI~~~~~ 188 (416)
+-..+.+..|-+. ...-+|.+.|.-+ .++.. =+|+|+|.|.+. .-..+.|.++ |..|||+|+.+..
T Consensus 44 ~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~sp~ 116 (277)
T 3giw_A 44 AGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECCHH
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCChH
Confidence 3344556678863 3344888887743 23333 379999998744 2233444442 4579999999988
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEeccccccccC--------ccccccCCCceEEEeeecccccccCCCchHHHH-HHHhc
Q 014896 189 ALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLD--------PERLNISKREAVAVHWLQHSLYDVTGSDTNTLC-LLQRL 259 (416)
Q Consensus 189 ~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~--------~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~-~ir~L 259 (416)
-|+.+..+|.+. -.-..+|... .+.++. ...+....--+|+.|.++|-+.+. .....+|. ..+.|
T Consensus 117 mLa~Ar~~l~~~---~~~~~~~v~a--D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~-~~p~~~l~~l~~~L 190 (277)
T 3giw_A 117 VLTLSQGLLAST---PEGRTAYVEA--DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDE-DDAVGIVRRLLEPL 190 (277)
T ss_dssp HHHTTHHHHCCC---SSSEEEEEEC--CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG-GCHHHHHHHHHTTS
T ss_pred HHHHHHHHhccC---CCCcEEEEEe--cccChhhhhcccccccccCcCCcchHHhhhhHhcCCch-hhHHHHHHHHHHhC
Confidence 888777666421 0112444432 222221 112222222245556544433331 11235564 45779
Q ss_pred CCcE-EEEecc
Q 014896 260 APKV-VTVVEQ 269 (416)
Q Consensus 260 ~P~v-vtlvE~ 269 (416)
+|.- +++.+-
T Consensus 191 ~PGG~Lvls~~ 201 (277)
T 3giw_A 191 PSGSYLAMSIG 201 (277)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCcEEEEEec
Confidence 9974 455543
No 48
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=85.33 E-value=2.5 Score=39.24 Aligned_cols=108 Identities=13% Similarity=0.140 Sum_probs=60.2
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEeccc
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAE 215 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~ 215 (416)
+++.+.. +.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..|++ .+|.. .
T Consensus 61 ~l~~~~~-~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~~--~ 124 (285)
T 4htf_A 61 VLAEMGP-QKLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDLSAQMIDRAKQAAE----AKGVSDNMQFIH--C 124 (285)
T ss_dssp HHHHTCS-SCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHH----C-CCGGGEEEEE--S
T ss_pred HHHhcCC-CCCEEEEeCCcchH----HHHHHHHC-C----CEEEEEECCHHHHHHHHHHHH----hcCCCcceEEEE--c
Confidence 3444433 35789999999884 55566655 2 489999999887877666543 34654 44443 2
Q ss_pred cccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 216 KVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
.++++.. +.-..=++++.+ .++|. . ....+|.. .+-|+|.-++++.
T Consensus 125 d~~~~~~--~~~~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 125 AAQDVAS--HLETPVDLILFHAVLEWV-A----DPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp CGGGTGG--GCSSCEEEEEEESCGGGC-S----CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHhhh--hcCCCceEEEECchhhcc-c----CHHHHHHHHHHHcCCCeEEEEE
Confidence 3333321 000111344443 35553 1 23456655 4679998665443
No 49
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=85.20 E-value=3.8 Score=40.31 Aligned_cols=110 Identities=17% Similarity=0.097 Sum_probs=63.8
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHc-C----CCeEEEecccccccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKL-G----LPFEFCPVAEKVGNL 220 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~l-g----vpFeF~~v~~~~e~l 220 (416)
..-+|+|+|.|.|.-=..|.+.+ .|..++|||+.+...++.+.+++.+.+... | -..+|..- .++++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~--d~~~l 154 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG--FIENL 154 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES--CTTCG
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEc--cHHHh
Confidence 44589999999885333333333 134599999999999999998888877665 4 34555532 23332
Q ss_pred C---ccccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 221 D---PERLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 221 ~---~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
. ...+.-..=++++.|...|.+. ....+|.. .+-|+|.-.+++
T Consensus 155 ~~~~~~~~~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 155 ATAEPEGVPDSSVDIVISNCVCNLST----NKLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp GGCBSCCCCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcccCCCCCCCEEEEEEccchhcCC----CHHHHHHHHHHHcCCCCEEEE
Confidence 1 1011111224555555433222 24466655 477999855443
No 50
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=85.02 E-value=3.2 Score=39.86 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=75.2
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEK 216 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~ 216 (416)
.|++.+.. --.|+|+|.|.| .|--.++. .+|..++++++-+...++-+.+++ ..+|+++.|...
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~G----pLAl~~~~---~~p~a~y~a~DId~~~le~a~~~l----~~~g~~~~~~v~--- 188 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLN----PLAAPWMG---LPAETVYIASDIDARLVGFVDEAL----TRLNVPHRTNVA--- 188 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTG----GGCCTTTT---CCTTCEEEEEESBHHHHHHHHHHH----HHTTCCEEEEEC---
T ss_pred HHHhccCC--CceeeeeccCcc----HHHHHHHh---hCCCCEEEEEeCCHHHHHHHHHHH----HhcCCCceEEEe---
Confidence 34444433 448899988866 22222222 247899999999988777766554 567999877543
Q ss_pred ccccCccccccCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014896 217 VGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLG 296 (416)
Q Consensus 217 ~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFDsLd 296 (416)
++....+ -.+.+++.+|-+.|.|.+. .....++.+..|+|..|+|.=+--+- -.|=..--..|+..|+..-
T Consensus 189 --D~~~~~p-~~~~DvaL~lkti~~Le~q--~kg~g~~ll~aL~~~~vvVSfp~ksl----~Grs~gm~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 189 --DLLEDRL-DEPADVTLLLKTLPCLETQ--QRGSGWEVIDIVNSPNIVVTFPTKSL----GQRSKGMFQNYSQSFESQA 259 (281)
T ss_dssp --CTTTSCC-CSCCSEEEETTCHHHHHHH--STTHHHHHHHHSSCSEEEEEEECC-----------CHHHHHHHHHHHHH
T ss_pred --eecccCC-CCCcchHHHHHHHHHhhhh--hhHHHHHHHHHhCCCCEEEeccchhh----cCCCcchhhHHHHHHHHHH
Confidence 2211111 2345666666544444432 23345588899999877765432111 1111122236777777753
No 51
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=84.79 E-value=2.4 Score=39.77 Aligned_cols=108 Identities=9% Similarity=0.026 Sum_probs=59.3
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~ 224 (416)
...-+|+|+|.|.|. +...|+.+- +|..++|||+.+...++.+.+++... ....-..+|.. ..++++....
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~--~d~~~~~~~~ 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKI--SSSDDFKFLG 105 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEE--CCTTCCGGGC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEE--cCHHhCCccc
Confidence 356789999999884 334444321 14568999999988888777665443 01123455543 2334433211
Q ss_pred -ccc--CCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 225 -LNI--SKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 225 -l~~--~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..+ ..=+.++.+ .+||. ....+|.. .+.|+|.-.+++
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS------CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh------CHHHHHHHHHHhcCCCcEEEE
Confidence 001 111344444 35554 34466655 467899866543
No 52
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=84.70 E-value=5 Score=37.29 Aligned_cols=110 Identities=13% Similarity=0.087 Sum_probs=62.5
Q ss_pred HHHHHhh----hcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eE
Q 014896 136 QAIQEAF----EREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FE 209 (416)
Q Consensus 136 qaILeA~----~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--Fe 209 (416)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+.+...++.+.+++. ..|++ ++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~ 135 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPVQNKRNEEYNN----QAGLADNIT 135 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHHHHHHHHHHHH----HHTCTTTEE
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHHHHHHHHHHHH----hcCCCcceE
Confidence 4455555 33456699999999886544444433 2 289999999887877766543 34543 55
Q ss_pred EEeccccccccCccccccCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEE-EEecc
Q 014896 210 FCPVAEKVGNLDPERLNISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVV-TVVEQ 269 (416)
Q Consensus 210 F~~v~~~~e~l~~~~l~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vv-tlvE~ 269 (416)
|.. ..+.++. ..++ ++++.+ .++|. . ....+|.. .+-|+|.-. ++++.
T Consensus 136 ~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 136 VKY--GSFLEIP-----CEDNSYDFIWSQDAFLHS-P----DKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EEE--CCTTSCS-----SCTTCEEEEEEESCGGGC-S----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEE--cCcccCC-----CCCCCEeEEEecchhhhc-C----CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 543 2333332 1222 333333 35554 1 24556655 467899854 44544
No 53
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=84.49 E-value=2 Score=43.91 Aligned_cols=120 Identities=10% Similarity=0.027 Sum_probs=64.8
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH---HHHHcCCC-eEE
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD---FAEKLGLP-FEF 210 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~---~A~~lgvp-FeF 210 (416)
-..|++.+.-...=+|+|+|.|.|. +.-.+|.+. +.-+++||+.+...++-+.+++.+ .++..|+. -.+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~---g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAAT---NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHC---CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 3556666654556679999998874 333444333 223799999998777666655543 45666762 223
Q ss_pred EeccccccccCccccccCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEE
Q 014896 211 CPVAEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTV 266 (416)
Q Consensus 211 ~~v~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtl 266 (416)
.-+...+.++...+ .+..-+++.+|...+ . +.....+....+.|+|.-.++
T Consensus 235 efi~GD~~~lp~~d-~~~~aDVVf~Nn~~F---~-pdl~~aL~Ei~RvLKPGGrIV 285 (438)
T 3uwp_A 235 TLERGDFLSEEWRE-RIANTSVIFVNNFAF---G-PEVDHQLKERFANMKEGGRIV 285 (438)
T ss_dssp EEEECCTTSHHHHH-HHHTCSEEEECCTTC---C-HHHHHHHHHHHTTSCTTCEEE
T ss_pred EEEECcccCCcccc-ccCCccEEEEccccc---C-chHHHHHHHHHHcCCCCcEEE
Confidence 32333343332211 012335666675422 1 111223334568899975543
No 54
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=83.53 E-value=1.2 Score=43.22 Aligned_cols=44 Identities=11% Similarity=-0.020 Sum_probs=31.5
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCC
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTS 186 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~ 186 (416)
..|++.+.-...-+|+|+|.|.|.- ...|+.+. |.+++|+++.+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~ 217 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRA 217 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECH
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCH
Confidence 3577776656678999999998853 34444332 57899999985
No 55
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=83.44 E-value=2.8 Score=40.67 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=66.5
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEe
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCP 212 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~ 212 (416)
.+.|++.+.-.+.-+|+|+|.+.|.- ...|+.+. |.+++|+++. ...++.+.+++. ..|++ .+|..
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~ 246 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDI----SAAMLKHF---PELDSTILNL-PGAIDLVNENAA----EKGVADRMRGIA 246 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHH----HHHHHHHC---TTCEEEEEEC-GGGHHHHHHHHH----HTTCTTTEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHH----HHHHHHHC---CCCeEEEEec-HHHHHHHHHHHH----hcCCCCCEEEEe
Confidence 45777777656677999999998863 34444332 5679999998 666777666554 34543 55543
Q ss_pred ccccccccCccccccCCCceEEEee-ecccccccCCCchHHHHHH-HhcCCcE-EEEeccCC
Q 014896 213 VAEKVGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCLL-QRLAPKV-VTVVEQDL 271 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~i-r~L~P~v-vtlvE~ea 271 (416)
- +..+.. ....++++.+. +||. .+ .....+|..+ +.|+|.- ++++|...
T Consensus 247 ~--d~~~~~-----~~~~D~v~~~~vlh~~-~d--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 247 V--DIYKES-----YPEADAVLFCRILYSA-NE--QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp C--CTTTSC-----CCCCSEEEEESCGGGS-CH--HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred C--ccccCC-----CCCCCEEEEechhccC-CH--HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 2 222221 22335555544 4443 11 1134556554 6689974 44666543
No 56
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=83.39 E-value=1.4 Score=41.74 Aligned_cols=54 Identities=11% Similarity=0.011 Sum_probs=38.5
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
..|++.+.-...-+|+|+|.|.|. +...|+.+ + -++|||+.+...++.+.+++.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~~ml~~Ar~~~~ 88 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQRMCDDLAEALA 88 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHTS
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCHHHHHHHHHHHH
Confidence 446666655566789999999885 44556655 2 379999999888877766543
No 57
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=83.36 E-value=2.1 Score=38.23 Aligned_cols=107 Identities=17% Similarity=0.165 Sum_probs=58.1
Q ss_pred HHHHHhhhc-CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecc
Q 014896 136 QAIQEAFER-EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVA 214 (416)
Q Consensus 136 qaILeA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~ 214 (416)
+.+++.+.. ...-+|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++.. ..+|..
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~~-------~v~~~~-- 92 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEEAISHAQGRLKD-------GITYIH-- 92 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHHHHHHHHHHSCS-------CEEEEE--
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHHHHHHHHHhhhC-------CeEEEE--
Confidence 345555542 233469999999885 45566654 33 699999998877666554322 344432
Q ss_pred ccccccCccccccCCCceEEEe-eecccccccCCCchHHHHHH--HhcCCcEEE-Eecc
Q 014896 215 EKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCLL--QRLAPKVVT-VVEQ 269 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~i--r~L~P~vvt-lvE~ 269 (416)
...+++.+. ..=++++.+ .++|+ . ....+|..+ +-|+|.-.+ +.+.
T Consensus 93 ~d~~~~~~~----~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 93 SRFEDAQLP----RRYDNIVLTHVLEHI-D----DPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp SCGGGCCCS----SCEEEEEEESCGGGC-S----SHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccHHHcCcC----CcccEEEEhhHHHhh-c----CHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 233333110 111333333 35554 1 235677665 468997554 4443
No 58
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=83.18 E-value=6.4 Score=35.51 Aligned_cols=125 Identities=14% Similarity=0.001 Sum_probs=68.3
Q ss_pred HccCCccchhHHHHhHHHHHhhhc-CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 121 NGISPFVKFSHFTANQAIQEAFER-EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 121 ~~~~P~~kfa~~taNqaILeA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
|+..+-..-.+......+++.+.+ ...-+|+|+|.|.|.. ...|+.+. |. ++|||+.+...++.+.+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~-~v~~vD~s~~~~~~a~~~~-- 89 (257)
T 3f4k_A 20 FKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYV---KG-QITGIDLFPDFIEIFNENA-- 89 (257)
T ss_dssp HTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHC---CS-EEEEEESCHHHHHHHHHHH--
T ss_pred HcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhC---CC-eEEEEECCHHHHHHHHHHH--
Confidence 333333333444444556666643 3445899999998853 33444442 22 8999999988777766554
Q ss_pred HHHHcCCC--eEEEeccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE-Eec
Q 014896 200 FAEKLGLP--FEFCPVAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT-VVE 268 (416)
Q Consensus 200 ~A~~lgvp--FeF~~v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt-lvE 268 (416)
+..|++ .+|.. ..++++... -..=++++.+ .++|. ....+|.. .+-|+|.-.+ +.+
T Consensus 90 --~~~~~~~~~~~~~--~d~~~~~~~---~~~fD~v~~~~~l~~~------~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 90 --VKANCADRVKGIT--GSMDNLPFQ---NEELDLIWSEGAIYNI------GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp --HHTTCTTTEEEEE--CCTTSCSSC---TTCEEEEEEESCSCCC------CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --HHcCCCCceEEEE--CChhhCCCC---CCCEEEEEecChHhhc------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 455665 55543 233333211 0111344434 34553 24456655 4669998554 444
No 59
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=81.03 E-value=3.2 Score=36.50 Aligned_cols=51 Identities=20% Similarity=0.354 Sum_probs=35.7
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHH
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGK 195 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~ 195 (416)
...|++.+. ...-+|+|+|.+.| .+...|+.+ + .++|||+.+...++.+.+
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~~~~~~~~~~ 72 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAFPEAAEQAKE 72 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESSHHHHHHHHT
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCCHHHHHHHHH
Confidence 345666665 55678999999887 355667766 2 589999998776655443
No 60
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=80.48 E-value=3.6 Score=36.64 Aligned_cols=111 Identities=15% Similarity=0.088 Sum_probs=61.3
Q ss_pred HHHHhhhcC--CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecc
Q 014896 137 AIQEAFERE--DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVA 214 (416)
Q Consensus 137 aILeA~~g~--~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~ 214 (416)
.|.+.+... +.-+|+|+|.|.|.- ...|+.+ | .++|||+.+...++.+.+++.. .++..+|..
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s~~~~~~a~~~~~~----~~~~~~~~~-- 90 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLSQEMLSEAENKFRS----QGLKPRLAC-- 90 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSCHHHHHHHHHHHHH----TTCCCEEEC--
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECCHHHHHHHHHHHhh----cCCCeEEEe--
Confidence 344444332 556899999998863 3345544 2 3799999998888777766543 344444432
Q ss_pred ccccccCccccccCCCceEEEe--eecccccccCCCchHHHHHH-HhcCCcEEEEec
Q 014896 215 EKVGNLDPERLNISKREAVAVH--WLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVE 268 (416)
Q Consensus 215 ~~~e~l~~~~l~~~~~EalaVn--~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE 268 (416)
..+.++.. . ..=++++.+ .++|+.. ......+|..+ +.|+|.-+++++
T Consensus 91 ~d~~~~~~---~-~~fD~v~~~~~~l~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 91 QDISNLNI---N-RKFDLITCCLDSTNYIID--SDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CCGGGCCC---S-CCEEEEEECTTGGGGCCS--HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCCc---c-CCceEEEEcCccccccCC--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 22333321 1 122344443 4555421 11234556554 668998766653
No 61
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=79.59 E-value=4.3 Score=39.50 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=60.9
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEeccccccccCcc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAEKVGNLDPE 223 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~~~e~l~~~ 223 (416)
+.-.|+|+|.|.|. +...|+.+ +.-+++||+.+ +.++.+.++ ++..|++ .+|.. ..++++...
T Consensus 66 ~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-~~l~~a~~~----~~~~~~~~~v~~~~--~d~~~~~~~ 130 (349)
T 3q7e_A 66 KDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-SISDYAVKI----VKANKLDHVVTIIK--GKVEEVELP 130 (349)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-THHHHHHHH----HHHTTCTTTEEEEE--SCTTTCCCS
T ss_pred CCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-HHHHHHHHH----HHHcCCCCcEEEEE--CcHHHccCC
Confidence 34579999999884 45556655 23589999998 455555443 4455665 55543 334444211
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEEec
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVE 268 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE 268 (416)
...=++++.+++.+.+.. ......+|..+ +-|+|.-+++.+
T Consensus 131 ---~~~fD~Iis~~~~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 131 ---VEKVDIIISEWMGYCLFY-ESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ---SSCEEEEEECCCBBTBTB-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ---CCceEEEEEccccccccC-chhHHHHHHHHHHhCCCCCEEccc
Confidence 112245555655443332 23455677665 779999877643
No 62
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=78.68 E-value=6.8 Score=37.69 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=60.8
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v 213 (416)
.+|++...-.+.-+|+|+|.|.|. +...++.+. .-+++||+.+ ..++.+.++ ++..|++ .+|.
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~~~~~a~~~----~~~~~~~~~i~~~-- 92 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-SIIEMAKEL----VELNGFSDKITLL-- 92 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-THHHHHHHH----HHHTTCTTTEEEE--
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-HHHHHHHHH----HHHcCCCCCEEEE--
Confidence 345444433344589999999884 334555541 2489999988 455544433 3445654 4443
Q ss_pred cccccccCccccccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEEec
Q 014896 214 AEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVE 268 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE 268 (416)
...++++... ...=++++.+++.+.+.. ......+|..+ +-|+|.-+++.+
T Consensus 93 ~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 93 RGKLEDVHLP---FPKVDIIISEWMGYFLLY-ESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ESCTTTSCCS---SSCEEEEEECCCBTTBST-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ECchhhccCC---CCcccEEEEeCchhhccc-HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 3334443211 111245555554333322 22345566554 679998776633
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=78.64 E-value=1.7 Score=38.32 Aligned_cols=96 Identities=23% Similarity=0.254 Sum_probs=54.2
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
..-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ ++.|.- ..++++.+
T Consensus 43 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~-------~~~~~~----~d~~~~~~--- 99 (211)
T 3e23_A 43 AGAKILELGCGAGY----QAEAMLAA-G----FDVDATDGSPELAAEASRRL-------GRPVRT----MLFHQLDA--- 99 (211)
T ss_dssp TTCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHH-------TSCCEE----CCGGGCCC---
T ss_pred CCCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCCHHHHHHHHHhc-------CCceEE----eeeccCCC---
Confidence 34579999999885 45556655 2 38999999988887776665 444321 12223221
Q ss_pred ccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 226 NISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 226 ~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
-..=++++.+ .++|+.. .....+|.. .+.|+|.-++++.
T Consensus 100 -~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 100 -IDAYDAVWAHACLLHVPR---DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp -CSCEEEEEECSCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCcEEEEEecCchhhcCH---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 0111333333 4555421 123355554 4678998665543
No 64
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=78.35 E-value=7.1 Score=35.17 Aligned_cols=109 Identities=18% Similarity=0.210 Sum_probs=59.3
Q ss_pred HHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecccccc
Q 014896 139 QEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVG 218 (416)
Q Consensus 139 LeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e 218 (416)
++.......-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..|+..+|... .+.
T Consensus 34 ~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~l~~a~~~~~----~~~~~v~~~~~--d~~ 98 (252)
T 1wzn_A 34 FKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHEEMLRVARRKAK----ERNLKIEFLQG--DVL 98 (252)
T ss_dssp HHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHH----HTTCCCEEEES--CGG
T ss_pred HHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHH----hcCCceEEEEC--Chh
Confidence 333333445689999999885 34455554 2 389999999888887776653 34555555432 233
Q ss_pred ccCccccccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 219 NLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 219 ~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
++... ..=++++.++ .++... ......+|.. .+.|+|.-+++++
T Consensus 99 ~~~~~----~~fD~v~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 99 EIAFK----NEFDAVTMFFSTIMYFD--EEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GCCCC----SCEEEEEECSSGGGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcccC----CCccEEEEcCCchhcCC--HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 33211 1113333221 222111 1123345554 4679999777665
No 65
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=78.32 E-value=23 Score=30.42 Aligned_cols=98 Identities=19% Similarity=0.202 Sum_probs=54.8
Q ss_pred EEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccccC
Q 014896 149 HIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNIS 228 (416)
Q Consensus 149 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~~~ 228 (416)
.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.. .|+..+|.. ..+.++. +.-.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~---~~~~ 93 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQSSVGLAKAKQLAQE----KGVKITTVQ--SNLADFD---IVAD 93 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSSHHHHHHHHHHHHH----HTCCEEEEC--CBTTTBS---CCTT
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECCHHHHHHHHHHHHh----cCCceEEEE--cChhhcC---CCcC
Confidence 89999998875 34556655 2 3899999998888777666543 355555543 2233332 1111
Q ss_pred CCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 229 KREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 229 ~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
.=+.++.+. .|. .......+|.. .+.|+|.-.+++.
T Consensus 94 ~fD~v~~~~-~~~---~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 94 AWEGIVSIF-CHL---PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp TCSEEEEEC-CCC---CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred CccEEEEEh-hcC---CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 224444443 232 11123445554 4678998655443
No 66
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=77.92 E-value=6.6 Score=38.09 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=61.4
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEe
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCP 212 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~ 212 (416)
.++|++.+.-.+.-+|+|+|.|.|. +...++.++ .-++|||+.+. .++.+. +.++..|++ .+|.
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-~~~~a~----~~~~~~~l~~~v~~~- 104 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-MAQHAE----VLVKSNNLTDRIVVI- 104 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-HHHHHH----HHHHHTTCTTTEEEE-
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-HHHHHH----HHHHHcCCCCcEEEE-
Confidence 3577777765566699999998774 445566552 34899999874 444333 333445653 4443
Q ss_pred ccccccccCccccccCCCceEEEeee-cccccccCCCchHHH-HHHHhcCCcEEEEec
Q 014896 213 VAEKVGNLDPERLNISKREAVAVHWL-QHSLYDVTGSDTNTL-CLLQRLAPKVVTVVE 268 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn~l-~h~l~~~~~~~~~~L-~~ir~L~P~vvtlvE 268 (416)
...++++... ..=+.++.+.+ +|... ......+ ..-+-|+|.-+++..
T Consensus 105 -~~d~~~~~~~----~~~D~Ivs~~~~~~~~~---~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 105 -PGKVEEVSLP----EQVDIIISEPMGYMLFN---ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp -ESCTTTCCCS----SCEEEEEECCCBTTBTT---TSHHHHHHHGGGGEEEEEEEESC
T ss_pred -EcchhhCCCC----CceeEEEEeCchhcCCh---HHHHHHHHHHHhhcCCCeEEEEe
Confidence 3344444211 11144444543 44321 1222333 334778999777643
No 67
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=76.75 E-value=3.3 Score=42.59 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=61.9
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v 213 (416)
.+|++.+...+.-+|+|+|.|.|. +...++.+ +..++|||+.+. .++.+. +.++..|++ .+|.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s~-~l~~A~----~~~~~~gl~~~v~~~-- 212 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAST-MAQHAE----VLVKSNNLTDRIVVI-- 212 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECHH-HHHHHH----HHHHHTTCTTTEEEE--
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcHH-HHHHHH----HHHHHcCCCCcEEEE--
Confidence 456676655555699999999885 44466654 345999999875 554443 334455664 4444
Q ss_pred cccccccCccccccCCCceEEEeee-cccccccCCCchHHHHHHHhcCCcEEEEec
Q 014896 214 AEKVGNLDPERLNISKREAVAVHWL-QHSLYDVTGSDTNTLCLLQRLAPKVVTVVE 268 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaVn~l-~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE 268 (416)
..+++++... ..=++++.|.+ +|...+ .....+...-+-|+|.-+++.+
T Consensus 213 ~~d~~~~~~~----~~fD~Ivs~~~~~~~~~e--~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 213 PGKVEEVSLP----EQVDIIISEPMGYMLFNE--RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ESCTTTCCCS----SCEEEEECCCCHHHHTCH--HHHHHHHHGGGGEEEEEEEESC
T ss_pred ECchhhCccC----CCeEEEEEeCchHhcCcH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 3334443211 11245555654 333211 0112223334778999777654
No 68
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=76.69 E-value=4.6 Score=39.87 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=58.9
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecc-c
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVA-E 215 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~-~ 215 (416)
.|++.+.-...-.|+|+|.+.|. ++..|+.+ | .++|||+.+...++. |+..|++..-..+. .
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~~~~~~--------a~~~~~~~~~~~~~~~ 160 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSSGVAAK--------AREKGIRVRTDFFEKA 160 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCHHHHHH--------HHTTTCCEECSCCSHH
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCHHHHHH--------HHHcCCCcceeeechh
Confidence 44555544456789999999987 55566654 2 289999998776654 44446665321111 0
Q ss_pred cccccCccccccCCCceEEE-eeecccccccCCCchHHHHHH-HhcCCcEEEEec
Q 014896 216 KVGNLDPERLNISKREAVAV-HWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVE 268 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaV-n~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE 268 (416)
..+++.. .-..=++++. +.++|+ .....+|..+ +-|+|.-+++++
T Consensus 161 ~~~~l~~---~~~~fD~I~~~~vl~h~-----~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 161 TADDVRR---TEGPANVIYAANTLCHI-----PYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HHHHHHH---HHCCEEEEEEESCGGGC-----TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHhhccc---CCCCEEEEEECChHHhc-----CCHHHHHHHHHHHcCCCeEEEEE
Confidence 1111110 0011133333 446665 1345666654 668998665554
No 69
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=76.54 E-value=28 Score=30.09 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=52.8
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
+.-+|+|+|.|.|. +...|+.+ |+ -++|||+.+...++.+.+++ +..|+..+|.. ....++.
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~--~d~~~~~---- 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVDKEAVDVLIENL----GEFKGKFKVFI--GDVSEFN---- 110 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHHHHHHHHHHT----GGGTTSEEEEE--SCGGGCC----
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECCHHHHHHHHHHH----HHcCCCEEEEE--CchHHcC----
Confidence 34589999999886 44455555 22 27999999988777766554 34566554442 2333332
Q ss_pred ccCCCceEEEeeecccccccCCCchHHHHHHHhcC
Q 014896 226 NISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLA 260 (416)
Q Consensus 226 ~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~ 260 (416)
..=++++.|...|... .+....+|..+.++-
T Consensus 111 --~~~D~v~~~~p~~~~~--~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 --SRVDIVIMNPPFGSQR--KHADRPFLLKAFEIS 141 (207)
T ss_dssp --CCCSEEEECCCCSSSS--TTTTHHHHHHHHHHC
T ss_pred --CCCCEEEEcCCCcccc--CCchHHHHHHHHHhc
Confidence 1235666675433221 133445565544443
No 70
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=75.59 E-value=12 Score=32.45 Aligned_cols=94 Identities=18% Similarity=0.143 Sum_probs=53.2
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLN 226 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~ 226 (416)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.++ .-..+|.. ..+.++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~--------~~~~~~~~--~d~~~~~----- 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATRLVELARQT--------HPSVTFHH--GTITDLS----- 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHHHHHHHHHH--------CTTSEEEC--CCGGGGG-----
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHHHHHHHHHh--------CCCCeEEe--Ccccccc-----
Confidence 5679999999886 55566665 2 2899999998777666554 11233332 2233322
Q ss_pred cCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 227 ISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 227 ~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..++ ++++.+ .++|+. ......+|.. .+.|+|.-.+++
T Consensus 98 ~~~~~fD~v~~~~~l~~~~---~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMG---PGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp GSCCCEEEEEEESSSTTCC---TTTHHHHHHHHHHTEEEEEEEEE
T ss_pred cCCCCeEEEEehhhHhcCC---HHHHHHHHHHHHHHcCCCcEEEE
Confidence 1222 334333 355541 1234566655 467899755443
No 71
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=75.23 E-value=14 Score=32.37 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=54.0
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLN 226 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~ 226 (416)
.-+|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++.. .+...+|.. ..+.++. +.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~---~~ 100 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISEDMIRKAREYAKS----RESNVEFIV--GDARKLS---FE 100 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHH----TTCCCEEEE--CCTTSCC---SC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHHHHHHHHHHHHh----cCCCceEEE--CchhcCC---CC
Confidence 5589999999883 44555555 23 899999998877777665532 333444443 2232322 11
Q ss_pred cCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 227 ISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 227 ~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
-..=+.++.+...|.... .....+|.. .+.|+|.-.+++
T Consensus 101 ~~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEP--LELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp TTCEEEEEEESCGGGCCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcEEEEEEcCchHhCCH--HHHHHHHHHHHHHcCCCcEEEE
Confidence 111244444433111111 122345554 467899855443
No 72
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=74.61 E-value=14 Score=34.75 Aligned_cols=54 Identities=19% Similarity=0.129 Sum_probs=37.9
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEe
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCP 212 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~ 212 (416)
.-.|+|+|.|.|. +.-.|+.+ |..++|||+.+.+.++.+.+++ +..|+. .+|..
T Consensus 124 ~~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDis~~al~~A~~n~----~~~~l~~~v~~~~ 179 (284)
T 1nv8_A 124 IKTVADIGTGSGA----IGVSVAKF----SDAIVFATDVSSKAVEIARKNA----ERHGVSDRFFVRK 179 (284)
T ss_dssp CCEEEEESCTTSH----HHHHHHHH----SSCEEEEEESCHHHHHHHHHHH----HHTTCTTSEEEEE
T ss_pred CCEEEEEeCchhH----HHHHHHHC----CCCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEEE
Confidence 3479999999885 33444444 4578999999998888777654 445764 56553
No 73
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=74.26 E-value=13 Score=35.04 Aligned_cols=107 Identities=11% Similarity=-0.002 Sum_probs=60.9
Q ss_pred HHHHHhhh-cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEe
Q 014896 136 QAIQEAFE-REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCP 212 (416)
Q Consensus 136 qaILeA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~ 212 (416)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .+|..
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~ 173 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLSAAQADFGNRRA----RELRIDDHVRSRV 173 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEEE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCCHHHHHHHHHHH----HHcCCCCceEEEE
Confidence 34666665 3455689999998874 3344444422 47999999988777766554 445665 55543
Q ss_pred ccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE
Q 014896 213 VAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT 265 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt 265 (416)
..++++... -..=++++.+ .++|. + ...+|.. .+-|+|.-.+
T Consensus 174 --~d~~~~~~~---~~~fD~V~~~~~l~~~--~----~~~~l~~~~~~LkpgG~l 217 (312)
T 3vc1_A 174 --CNMLDTPFD---KGAVTASWNNESTMYV--D----LHDLFSEHSRFLKVGGRY 217 (312)
T ss_dssp --CCTTSCCCC---TTCEEEEEEESCGGGS--C----HHHHHHHHHHHEEEEEEE
T ss_pred --CChhcCCCC---CCCEeEEEECCchhhC--C----HHHHHHHHHHHcCCCcEE
Confidence 233333211 0111334333 34543 2 5556655 4779997554
No 74
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=73.97 E-value=6.2 Score=33.21 Aligned_cols=102 Identities=11% Similarity=0.062 Sum_probs=58.0
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAE 215 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~ 215 (416)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+.+...++.+.+++. ..|++ .+|.. .
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~~~~~--~ 90 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDGAIEVTKQNLA----KFNIKNCQIIK--G 90 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHHHHHHHHHHHH----HTTCCSEEEEE--S
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHHHHHHHHHHHH----HcCCCcEEEEE--C
Confidence 44555544455689999999886 3444554 45689999999887777666543 44553 44432 2
Q ss_pred cccccCccccccCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEE
Q 014896 216 KVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTV 266 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtl 266 (416)
.+.+. +.-..=+.++.+.. .....++..++++ |.-.++
T Consensus 91 d~~~~----~~~~~~D~i~~~~~--------~~~~~~l~~~~~~-~gG~l~ 128 (183)
T 2yxd_A 91 RAEDV----LDKLEFNKAFIGGT--------KNIEKIIEILDKK-KINHIV 128 (183)
T ss_dssp CHHHH----GGGCCCSEEEECSC--------SCHHHHHHHHHHT-TCCEEE
T ss_pred Ccccc----ccCCCCcEEEECCc--------ccHHHHHHHHhhC-CCCEEE
Confidence 22221 10012233433322 3345678888888 864443
No 75
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=72.19 E-value=12 Score=36.96 Aligned_cols=122 Identities=12% Similarity=0.019 Sum_probs=65.6
Q ss_pred HHhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 014896 133 TANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCP 212 (416)
Q Consensus 133 taNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~ 212 (416)
...+.+++.+.....-+|+|+|.|.|. +...++.+. |..++|||+.+...++.+.+++...--.-.+.++|..
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~ 281 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 281 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEe
Confidence 345578888876666789999999884 334444442 4568999999988888777765432111112245543
Q ss_pred ccccccccCccccccCCCceEEEeeecccccccCCC-chHHHHHH-HhcCCcEEEEe
Q 014896 213 VAEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGS-DTNTLCLL-QRLAPKVVTVV 267 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~-~~~~L~~i-r~L~P~vvtlv 267 (416)
- .+.+ .+.-..=+.++.|-..|........ ...++..+ +.|+|.-.+++
T Consensus 282 ~--D~~~----~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 282 N--NALS----GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp C--STTT----TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred c--hhhc----cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 1 1211 1111122456666543322111111 12455554 56999865444
No 76
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=72.09 E-value=7.6 Score=33.80 Aligned_cols=109 Identities=24% Similarity=0.261 Sum_probs=58.6
Q ss_pred hHHHHHhhhc-CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEe
Q 014896 135 NQAIQEAFER-EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCP 212 (416)
Q Consensus 135 NqaILeA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~ 212 (416)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+ .|+ ..+|..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~~~~~~a~~--------~~~~~~~~~~ 96 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSAEMIAEAGR--------HGLDNVEFRQ 96 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCHHHHHHHGG--------GCCTTEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCHHHHHHHHh--------cCCCCeEEEe
Confidence 4567777763 334599999999885 44444444 2 389999998776655443 442 344443
Q ss_pred ccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEE-EEecc
Q 014896 213 VAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVV-TVVEQ 269 (416)
Q Consensus 213 v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vv-tlvE~ 269 (416)
..+.++. .-..=++++.+ .++|+. + .....+|.. .+.|+|.-. ++++.
T Consensus 97 --~d~~~~~----~~~~~D~v~~~~~l~~~~-~--~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 97 --QDLFDWT----PDRQWDAVFFAHWLAHVP-D--DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp --CCTTSCC----CSSCEEEEEEESCGGGSC-H--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --cccccCC----CCCceeEEEEechhhcCC-H--HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2233321 01111344444 345531 1 012445554 467999755 44543
No 77
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=71.62 E-value=7 Score=35.48 Aligned_cols=110 Identities=20% Similarity=0.088 Sum_probs=56.1
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCcc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPE 223 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~ 223 (416)
...=+|+|+|.|.| .+...|+.+. |..++|||+.+.+.+-+...+..+-++..|++ .+|. ....+++. .
T Consensus 23 ~~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~--~~d~~~l~-~ 92 (225)
T 3p2e_A 23 QFDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFV--IAAAESLP-F 92 (225)
T ss_dssp TCSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEE--CCBTTBCC-G
T ss_pred CCCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEE--EcCHHHhh-h
Confidence 34457999999887 3555666552 56899999998444422222222233455665 5553 23344442 1
Q ss_pred ccccCCCceEEEeeec---ccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 224 RLNISKREAVAVHWLQ---HSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~---h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
.+ .+-+..|...+ +...........+|.. -|-|+|.-.++.
T Consensus 93 ~~---~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 EL---KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp GG---TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hc---cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 11 13333333211 1111111223455655 467999866544
No 78
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=71.57 E-value=11 Score=36.35 Aligned_cols=112 Identities=15% Similarity=0.121 Sum_probs=61.0
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC--CeEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL--PFEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv--pFeF~~v 213 (416)
++|++.+.-.+.-.|+|+|.|.|. +...++.+ | .-+++||+.+. .++.+.+++ +..|+ ..+|.
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s~-~~~~a~~~~----~~~~~~~~i~~~-- 118 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQSE-ILYQAMDII----RLNKLEDTITLI-- 118 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESST-HHHHHHHHH----HHTTCTTTEEEE--
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChHH-HHHHHHHHH----HHcCCCCcEEEE--
Confidence 456665544455589999999884 44455655 2 24899999884 555554443 34455 24443
Q ss_pred cccccccCccccccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEE
Q 014896 214 AEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTV 266 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtl 266 (416)
...++++... ...=++++.+++.+.+.. ......+|..+ +-|+|.-+++
T Consensus 119 ~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 119 KGKIEEVHLP---VEKVDVIISEWMGYFLLF-ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ESCTTTSCCS---CSCEEEEEECCCBTTBTT-TCHHHHHHHHHHHHEEEEEEEE
T ss_pred EeeHHHhcCC---CCcEEEEEEcCchhhccC-HHHHHHHHHHHHhhcCCCcEEE
Confidence 3334443211 111245555554332221 12234566554 6799987766
No 79
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=71.35 E-value=4.2 Score=37.12 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=55.4
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
+.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++. + .+|.. ..+.++..
T Consensus 50 ~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~------~--~~~~~--~d~~~~~~--- 107 (263)
T 3pfg_A 50 KAASLLDVACGTGM----HLRHLADS--FG---TVEGLELSADMLAIARRRNP------D--AVLHH--GDMRDFSL--- 107 (263)
T ss_dssp TCCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESCHHHHHHHHHHCT------T--SEEEE--CCTTTCCC---
T ss_pred CCCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECCHHHHHHHHhhCC------C--CEEEE--CChHHCCc---
Confidence 34679999999884 55666665 22 79999999887776665532 2 33332 22333321
Q ss_pred ccCCCceEEEe--eecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 226 NISKREAVAVH--WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 226 ~~~~~EalaVn--~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
-..=++++.+ .++|+.. ......+|.. .+.|+|.-+++++
T Consensus 108 -~~~fD~v~~~~~~l~~~~~--~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 -GRRFSAVTCMFSSIGHLAG--QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp -SCCEEEEEECTTGGGGSCH--HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred -cCCcCEEEEcCchhhhcCC--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 0112344443 4455421 1123345554 4678999877775
No 80
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=71.16 E-value=2.3 Score=38.44 Aligned_cols=42 Identities=10% Similarity=0.278 Sum_probs=28.8
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
..-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.++
T Consensus 41 ~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 41 GCRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp TCSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCHHHHHHHHTT
T ss_pred CCCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCHHHHHHHHhh
Confidence 34589999998775 34555554 2 2689999998777665543
No 81
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=70.34 E-value=16 Score=33.54 Aligned_cols=108 Identities=9% Similarity=0.036 Sum_probs=56.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
..-+|+|+|.|.|.--.. |+.+ +..++|||+.+...++.+.+++. ..|++-....+...+.++...
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~----~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~~~d~~~~~~~-- 129 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERA----GIGEYYGVDIAEVSINDARVRAR----NMKRRFKVFFRAQDSYGRHMD-- 129 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHH----TCSEEEEEESCHHHHHHHHHHHH----TSCCSSEEEEEESCTTTSCCC--
T ss_pred CCCeEEEECCCCCHHHHH----HHHC----CCCEEEEEECCHHHHHHHHHHHH----hcCCCccEEEEECCccccccC--
Confidence 445899999998853322 4433 13489999999888877766543 345532233233333333210
Q ss_pred ccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 226 NISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 226 ~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
.-..=++++.+. +||.+.. ......+|.. .+-|+|.-.+++.
T Consensus 130 ~~~~fD~v~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAFST-SESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CSSCEEEEEEESCGGGGGSS-HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCcCEEEECchhhhhcCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 001113444443 5553221 1123455655 4678998665443
No 82
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=70.23 E-value=18 Score=34.34 Aligned_cols=45 Identities=11% Similarity=0.180 Sum_probs=31.7
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
.-+|+|+|.|.|.- +..++.+.+ -++|||+.+...++.+.++..+
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~~l~~A~~~~~~ 93 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDADAIARGNERYNK 93 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHHHHHHHHHHHHh
Confidence 46899999998852 222332321 3799999999999988876543
No 83
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=70.17 E-value=13 Score=32.89 Aligned_cols=107 Identities=18% Similarity=0.163 Sum_probs=59.5
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccc
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKV 217 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~ 217 (416)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.+...++.+.+++.. .+...+|... .+
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~--d~ 88 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEEMLEIAQEKAME----TNRHVDFWVQ--DM 88 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHHHHHHHHHHHHH----TTCCCEEEEC--CG
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHHHHHHHHHhhhh----cCCceEEEEc--Ch
Confidence 44444322 579999999885 44456654 4899999998888777766543 3444555432 22
Q ss_pred cccCccccccCCCceEEEe--eecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 218 GNLDPERLNISKREAVAVH--WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 218 e~l~~~~l~~~~~EalaVn--~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
.++.. . ..=++++.+ .++|+.. ......+|.. .+.|+|.-.++++
T Consensus 89 ~~~~~---~-~~fD~v~~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 89 RELEL---P-EPVDAITILCDSLNYLQT--EADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCC---S-SCEEEEEECTTGGGGCCS--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC---C-CCcCEEEEeCCchhhcCC--HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 22211 1 112344443 3455421 1122345554 4678998776654
No 84
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=69.93 E-value=19 Score=33.26 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=60.1
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~ 224 (416)
.+.-.|+|+|.|.|. +...|+.+. |+..++|||+.+...++.+.+++ +..+...+|.. ..++++...
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~v~~~~--~d~~~~~~~- 87 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGETLLAEARELF----RLLPYDSEFLE--GDATEIELN- 87 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHHHHHHHHHHH----HSSSSEEEEEE--SCTTTCCCS-
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHH----HhcCCceEEEE--cchhhcCcC-
Confidence 456789999999883 445566553 23478999999988777666554 33444444443 233333221
Q ss_pred cccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEE-EEeccC
Q 014896 225 LNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVV-TVVEQD 270 (416)
Q Consensus 225 l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vv-tlvE~e 270 (416)
..=+.++.+. ++|. . ....+|.. .+.|+|.-. ++++.+
T Consensus 88 ---~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 ---DKYDIAICHAFLLHM-T----TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ---SCEEEEEEESCGGGC-S----SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---CCeeEEEECChhhcC-C----CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 1123444443 4443 1 23456654 577999855 456554
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=69.79 E-value=27 Score=30.59 Aligned_cols=110 Identities=10% Similarity=0.101 Sum_probs=59.1
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPER 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~~ 224 (416)
..-.|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++. ..|++ .+|.. ..+.++.. .
T Consensus 41 ~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s~~~l~~a~~~~~----~~~~~~v~~~~--~d~~~~~~-~ 106 (214)
T 1yzh_A 41 DNPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDIQKSVLSYALDKVL----EVGVPNIKLLW--VDGSDLTD-Y 106 (214)
T ss_dssp CCCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHH----HHCCSSEEEEE--CCSSCGGG-T
T ss_pred CCCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEcCHHHHHHHHHHHH----HcCCCCEEEEe--CCHHHHHh-h
Confidence 34469999999885 333444432 45789999999888877766654 34553 44442 22333210 0
Q ss_pred cccCCCceEEEeeecccc---cc-cCCCchHHHHHH-HhcCCcEEEEecc
Q 014896 225 LNISKREAVAVHWLQHSL---YD-VTGSDTNTLCLL-QRLAPKVVTVVEQ 269 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l---~~-~~~~~~~~L~~i-r~L~P~vvtlvE~ 269 (416)
+.-..=+.+++|+..+-. +. .......+|..+ +.|+|.-+++++.
T Consensus 107 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 107 FEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 111122456666421000 00 011234566665 5699997766654
No 86
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=69.60 E-value=18 Score=31.50 Aligned_cols=63 Identities=17% Similarity=0.175 Sum_probs=41.2
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEE
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFC 211 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~ 211 (416)
..+++.+.-...-+|+|+|.|.|..=. .|+.+ + -++|+|+.+...++.+.+++.+ .|++ .+|.
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~~----~la~~-~----~~v~~vD~~~~~~~~a~~~~~~----~~~~~v~~~ 130 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQTA----ILAHL-V----QHVCSVERIKGLQWQARRRLKN----LDLHNVSTR 130 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHH----HHHHH-S----SEEEEEESCHHHHHHHHHHHHH----TTCCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHH----HHHHh-C----CEEEEEecCHHHHHHHHHHHHH----cCCCceEEE
Confidence 334555655566789999999886433 33333 1 4899999998888877766543 4554 4444
No 87
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=69.50 E-value=10 Score=33.06 Aligned_cols=69 Identities=13% Similarity=0.081 Sum_probs=45.4
Q ss_pred HHHHhHHHHHhhh--cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-
Q 014896 131 HFTANQAIQEAFE--REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP- 207 (416)
Q Consensus 131 ~~taNqaILeA~~--g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp- 207 (416)
+.-..+.+++.+. -...-.|+|+|.|.|. +...|+.+ +..++|||+.+...++.+.+++. ..|++
T Consensus 43 ~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~ 110 (205)
T 3grz_A 43 NHQTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDISDESMTAAEENAA----LNGIYD 110 (205)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESCHHHHHHHHHHHH----HTTCCC
T ss_pred CCccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECCHHHHHHHHHHHH----HcCCCc
Confidence 3445566677666 3456689999999883 33346654 23589999999887777666543 44554
Q ss_pred eEEE
Q 014896 208 FEFC 211 (416)
Q Consensus 208 FeF~ 211 (416)
++|.
T Consensus 111 v~~~ 114 (205)
T 3grz_A 111 IALQ 114 (205)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 5544
No 88
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=69.31 E-value=5.5 Score=31.87 Aligned_cols=39 Identities=23% Similarity=0.278 Sum_probs=33.2
Q ss_pred CCCCeEEEeecCCCH----HHHHHHHHHHHHHHHHcCCCeEEE
Q 014896 173 GGPPYVRLTGLGTSM----EALEATGKRLSDFAEKLGLPFEFC 211 (416)
Q Consensus 173 ggpP~LRITgI~~~~----~~l~~tg~rL~~~A~~lgvpFeF~ 211 (416)
-|||..|||...++. ..|+++-+.+.+..++.|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 378988888888763 468999999999999999999886
No 89
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=69.22 E-value=4.6 Score=35.67 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=28.9
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.-+|+|+|.|.|. +...|+.+ ..++|||+.+...++.+.++
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~ 71 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-----GYSVTGIDINSEAIRLAETA 71 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-----TCEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEECCCCCH----HHHHHHhC-----CCeEEEEECCHHHHHHHHHH
Confidence 4479999999885 44455555 23899999988777665543
No 90
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=68.48 E-value=23 Score=31.68 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=56.0
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~ 224 (416)
...-+|+|+|.|.|.- ...|+.+ + .++|||+.+...++.+.+++ +...-.++|... ..+++.
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~--d~~~~~--- 99 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDADAAMLEVFRQKI----AGVDRKVQVVQA--DARAIP--- 99 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESCHHHHHHHHHHT----TTSCTTEEEEES--CTTSCC---
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECCHHHHHHHHHHh----hccCCceEEEEc--ccccCC---
Confidence 3456899999998863 3344544 2 38999999988777766654 222233555432 233332
Q ss_pred cccCCC--ceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 225 LNISKR--EAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 225 l~~~~~--EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
..++ +.++.+. +||. . ....+|.. .+-|+|.-.+++.
T Consensus 100 --~~~~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 --LPDESVHGVIVVHLWHLV-P----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --SCTTCEEEEEEESCGGGC-T----THHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCCeeEEEECCchhhc-C----CHHHHHHHHHHHCCCCcEEEEE
Confidence 1222 3444443 4543 1 23456655 4678998655443
No 91
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=68.25 E-value=11 Score=36.27 Aligned_cols=46 Identities=11% Similarity=0.094 Sum_probs=30.2
Q ss_pred HHHHhh--hcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHH
Q 014896 137 AIQEAF--EREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEAL 190 (416)
Q Consensus 137 aILeA~--~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l 190 (416)
.|++.+ .-...-+|+|+|.+.|. +...|+.+. |.+++|+++.+ ..+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~~ 229 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQP-QVV 229 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECH-HHH
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccH-HHH
Confidence 567766 22344689999999885 444555442 56799999874 434
No 92
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=68.24 E-value=8.1 Score=34.78 Aligned_cols=105 Identities=17% Similarity=0.131 Sum_probs=58.0
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEecccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEK 216 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~ 216 (416)
.+++.+.....-+|+|+|.|.|.--..|.+.+ |..++|||+.+...++.+.++ .-..+|.. ..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~--~d 86 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDDMLEKAADR--------LPNTNFGK--AD 86 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHHHHHHHHHH--------STTSEEEE--CC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHHHHHHHHHh--------CCCcEEEE--CC
Confidence 34555444455689999999887555554443 234799999998877666554 12234432 22
Q ss_pred ccccCccccccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 217 VGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 217 ~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
.+++.+. ..=+.++.+. ++|. .....+|.. .+.|+|.-.+++
T Consensus 87 ~~~~~~~----~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 87 LATWKPA----QKADLLYANAVFQWV-----PDHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp TTTCCCS----SCEEEEEEESCGGGS-----TTHHHHHHHHGGGEEEEEEEEE
T ss_pred hhhcCcc----CCcCEEEEeCchhhC-----CCHHHHHHHHHHhcCCCeEEEE
Confidence 3333210 1113444443 4553 234456655 477999855433
No 93
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=67.40 E-value=73 Score=31.81 Aligned_cols=96 Identities=22% Similarity=0.197 Sum_probs=59.7
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLN 226 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~ 226 (416)
.-.|+|+|.|.|.- ...||.+ + -+++||+.+.+.++.+.+++ +..|++.+|.. .+++++.+.
T Consensus 291 ~~~VLDlgcG~G~~----sl~la~~-~----~~V~gvD~s~~ai~~A~~n~----~~ngl~v~~~~--~d~~~~~~~--- 352 (425)
T 2jjq_A 291 GEKILDMYSGVGTF----GIYLAKR-G----FNVKGFDSNEFAIEMARRNV----EINNVDAEFEV--ASDREVSVK--- 352 (425)
T ss_dssp SSEEEEETCTTTHH----HHHHHHT-T----CEEEEEESCHHHHHHHHHHH----HHHTCCEEEEE--CCTTTCCCT---
T ss_pred CCEEEEeeccchHH----HHHHHHc-C----CEEEEEECCHHHHHHHHHHH----HHcCCcEEEEE--CChHHcCcc---
Confidence 34789999988853 3345544 2 28999999998888777654 34566654443 334443221
Q ss_pred cCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEEec
Q 014896 227 ISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVE 268 (416)
Q Consensus 227 ~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE 268 (416)
.=+++++|-- ..+....++..++.++|.-++.+.
T Consensus 353 --~fD~Vv~dPP------r~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 --GFDTVIVDPP------RAGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp --TCSEEEECCC------TTCSCHHHHHHHHHHCCSEEEEEE
T ss_pred --CCCEEEEcCC------ccchHHHHHHHHHhcCCCcEEEEE
Confidence 2245554421 124456788888999999777664
No 94
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=66.65 E-value=12 Score=32.88 Aligned_cols=101 Identities=18% Similarity=0.042 Sum_probs=55.1
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEeccccccccCccccc
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCPVAEKVGNLDPERLN 226 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~v~~~~e~l~~~~l~ 226 (416)
-+|+|+|.|.|.--..+ +.+ + . -++|+|+.+...++.+.+++. ..|+ ..+|.. ..+.+..+. .
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~-~-~--~~V~~vD~s~~~l~~a~~~~~----~~~~~~v~~~~--~D~~~~~~~--~ 119 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSR-Y-A--AGATLIEMDRAVSQQLIKNLA----TLKAGNARVVN--SNAMSFLAQ--K 119 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHT-T-C--SEEEEECSCHHHHHHHHHHHH----HTTCCSEEEEC--SCHHHHHSS--C
T ss_pred CeEEEeCCCcCHHHHHH----Hhc-C-C--CEEEEEECCHHHHHHHHHHHH----HcCCCcEEEEE--CCHHHHHhh--c
Confidence 47999999988533222 223 1 1 289999999888887776554 4455 344442 222221110 0
Q ss_pred cCCCceEEEeeecccccccCCCchHHHHHHHh---cCCcEEEEecc
Q 014896 227 ISKREAVAVHWLQHSLYDVTGSDTNTLCLLQR---LAPKVVTVVEQ 269 (416)
Q Consensus 227 ~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~---L~P~vvtlvE~ 269 (416)
-..=+++++|...| .+....++..+.+ |+|.-+++++.
T Consensus 120 ~~~fD~V~~~~p~~-----~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 120 GTPHNIVFVDPPFR-----RGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp CCCEEEEEECCSSS-----TTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCCEEEECCCCC-----CCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 01113444443322 1334567777765 99987665554
No 95
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=66.61 E-value=11 Score=31.79 Aligned_cols=113 Identities=12% Similarity=-0.026 Sum_probs=63.4
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC---eEE
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP---FEF 210 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp---FeF 210 (416)
..+.+++.+.-...-+|+|+|.|.|. +...++.+ ..++|||+.+...++.+.+++. ..|++ .+|
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~~~~~ 106 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINRRAIKLAKENIK----LNNLDNYDIRV 106 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCHHHHHHHHHHHH----HTTCTTSCEEE
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCHHHHHHHHHHHH----HcCCCccceEE
Confidence 44567777765566789999999874 44455555 2489999999887777665543 44655 555
Q ss_pred EeccccccccCccccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 211 CPVAEKVGNLDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 211 ~~v~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
... .+.+..+ -..=++++.|...|. .......++.. .+.|+|.-.+++.
T Consensus 107 ~~~--d~~~~~~----~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 107 VHS--DLYENVK----DRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp EEC--STTTTCT----TSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEC--chhcccc----cCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEE
Confidence 432 2222111 111245555543221 01112344544 4678998665444
No 96
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=65.56 E-value=31 Score=28.68 Aligned_cols=51 Identities=14% Similarity=0.137 Sum_probs=36.5
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.+++.+.-.+.-.|+|+|.+.|. +...|+.+. . ++|||+.+...++.+.++
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHHHHHHHHHH
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHHHHHHHHHh
Confidence 45566665667789999999886 344555442 2 899999998877776655
No 97
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=65.31 E-value=20 Score=34.80 Aligned_cols=136 Identities=8% Similarity=-0.025 Sum_probs=72.0
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHc-CCCeEEEeccccccccCccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKL-GLPFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~l-gvpFeF~~v~~~~e~l~~~~ 224 (416)
+.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++..++..+ +-.++|..- ...+.-+ .
T Consensus 120 ~~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~--D~~~~l~-~ 189 (334)
T 1xj5_A 120 NPKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG--DGVAFLK-N 189 (334)
T ss_dssp CCCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES--CHHHHHH-T
T ss_pred CCCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC--CHHHHHH-h
Confidence 34589999999885 55666655 356799999999998888888877664333 123454421 1111100 0
Q ss_pred cccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHH
Q 014896 225 LNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFD 293 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFD 293 (416)
+.-..=+++++|...+.-....-....++.. .+.|+|.-++++..+..... ...+.+.+.-...+|.
T Consensus 190 ~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--~~~~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLH--MDIIEDIVSNCREIFK 257 (334)
T ss_dssp SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTC--HHHHHHHHHHHHHHCS
T ss_pred ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc--HHHHHHHHHHHHHhCc
Confidence 0001124566654321100000012455655 47799998887764433222 1223344444445555
No 98
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=65.28 E-value=9.5 Score=33.26 Aligned_cols=57 Identities=12% Similarity=0.066 Sum_probs=39.7
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
..+++.+.-...-+|+|+|.|.|. +...|+.+. |..++|+|+.+.+.++.+.+++..
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~s~~~~~~a~~~~~~ 86 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALERNPQYLGFIRDNLKK 86 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 445666665666789999999886 233444331 456999999998888877766543
No 99
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=64.15 E-value=15 Score=32.93 Aligned_cols=109 Identities=11% Similarity=0.054 Sum_probs=59.7
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccc
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAE 215 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~ 215 (416)
..+++.+.....-+|+|+|.|.|.- ...|+.+. ..++|+|+.+...++.+.+++... -..+|.. .
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~----~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~--~ 147 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRI----TKNLLTKL----YATTDLLEPVKHMLEEAKRELAGM-----PVGKFIL--A 147 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHH----HHHTHHHH----CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEE--S
T ss_pred HHHHHhhcccCCCEEEEECCCcCHH----HHHHHHhh----cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEE--c
Confidence 5566666555677999999998863 33333331 237999999988777766654332 1233332 2
Q ss_pred cccccCccccccCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 216 KVGNLDPERLNISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
.++++. ..++ ++++.+ .++|+.. .....+|.. .+.|+|.-++++
T Consensus 148 d~~~~~-----~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 148 SMETAT-----LPPNTYDLIVIQWTAIYLTD---ADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp CGGGCC-----CCSSCEEEEEEESCGGGSCH---HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cHHHCC-----CCCCCeEEEEEcchhhhCCH---HHHHHHHHHHHHhcCCCeEEEE
Confidence 333332 1122 344433 3555411 123345554 477999855443
No 100
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=63.86 E-value=10 Score=34.44 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=37.5
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
+++.+.+.+...|+|+|.|.|. +.-.|+.+- ..|..+||||+.+...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECCHHHHHHHHHHHH
Confidence 3444444567899999999994 333344331 1145799999999888877776654
No 101
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=63.66 E-value=17 Score=32.08 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=43.3
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
..+++.+.-...-.|+|+|.|.|. +...|+.+ + -++|||+.+.+.++.+.++ ++..|++ ++|.
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~~~~~a~~~----~~~~g~~~~v~~~ 109 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRADRIENIQKN----IDTYGLSPRMRAV 109 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHH----HHHTTCTTTEEEE
T ss_pred HHHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHHHHHHHHHH----HHHcCCCCCEEEE
Confidence 446666665555689999999874 34455555 2 4799999998888776655 4456776 5554
No 102
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=63.01 E-value=9.1 Score=36.90 Aligned_cols=111 Identities=21% Similarity=0.257 Sum_probs=63.3
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v 213 (416)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++. ...++.+.+++. ..|++ .+|..-
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~ 239 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-AGPAERARRRFA----DAGLADRVTVAEG 239 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-HHHHHHHHHHHH----hcCCCCceEEEeC
Confidence 45677665456779999999999 3444555442 5689999998 777777766653 34553 555532
Q ss_pred ccccc-ccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcE-EEEecc
Q 014896 214 AEKVG-NLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKV-VTVVEQ 269 (416)
Q Consensus 214 ~~~~e-~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~v-vtlvE~ 269 (416)
++. .+. . .-++++.+ .+||. .+ .....+|.. .+.|+|.- ++++|.
T Consensus 240 --d~~~~~~-~-----~~D~v~~~~vl~~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 240 --DFFKPLP-V-----TADVVLLSFVLLNW-SD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp --CTTSCCS-C-----CEEEEEEESCGGGS-CH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --CCCCcCC-C-----CCCEEEEeccccCC-CH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 121 111 0 12334333 34442 11 011255655 46789986 556666
No 103
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=62.79 E-value=14 Score=36.70 Aligned_cols=100 Identities=13% Similarity=0.199 Sum_probs=54.1
Q ss_pred EEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccccC
Q 014896 149 HIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLNIS 228 (416)
Q Consensus 149 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~~~ 228 (416)
+|+|+|.|.| ..++ +|.|.|.. |++||+.+. .++. ..+.++..|+.=....+..++++++.. .
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA~---~V~ave~s~-~~~~----a~~~~~~n~~~~~i~~i~~~~~~~~lp----e 148 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGAR---RVYAVEASA-IWQQ----AREVVRFNGLEDRVHVLPGPVETVELP----E 148 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTCS---EEEEEECST-THHH----HHHHHHHTTCTTTEEEEESCTTTCCCS----S
T ss_pred EEEEeCCCcc--HHHH---HHHHhCCC---EEEEEeChH-HHHH----HHHHHHHcCCCceEEEEeeeeeeecCC----c
Confidence 5899998877 3343 45454432 789999763 2222 234455667654444555566666421 1
Q ss_pred CCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEE
Q 014896 229 KREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTV 266 (416)
Q Consensus 229 ~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtl 266 (416)
+=++++-+++-+.+... +..+.++... |-|+|.-+++
T Consensus 149 ~~DvivsE~~~~~l~~e-~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLLHE-SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CEEEEECCCCBTTBTTT-CSHHHHHHHHHHHEEEEEEEE
T ss_pred cccEEEeeccccccccc-chhhhHHHHHHhhCCCCceEC
Confidence 11333334554433322 3445666554 6688876654
No 104
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=62.75 E-value=13 Score=32.44 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=39.2
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
.+++.+.-...-+|+|+|.|.|.--..|.+.. .|.-++|+|+.+...++.+.+++.+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERIPELAEKAERTLRK 124 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45555544555689999999886555554444 2345899999998888777766554
No 105
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=62.54 E-value=9.3 Score=35.24 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=40.5
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEecccccccc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNL 220 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l 220 (416)
...-+|+|+|.|.|.--..|.+.. |..++|+|+.+...++.+.++ ++.+|+. .+|. ..+++++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-------~~~~v~~vD~s~~~~~~a~~~----~~~~~l~~v~~~--~~d~~~~ 142 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-------PELELVLVDATRKKVAFVERA----IEVLGLKGARAL--WGRAEVL 142 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-------TTCEEEEEESCHHHHHHHHHH----HHHHTCSSEEEE--ECCHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHH----HHHhCCCceEEE--ECcHHHh
Confidence 345689999999887543333321 457899999998877776554 4455764 4443 3344444
No 106
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=62.32 E-value=54 Score=32.68 Aligned_cols=109 Identities=16% Similarity=0.147 Sum_probs=62.1
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEecccc
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEK 216 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~ 216 (416)
+++.+.-...-.|+|+|.|.|.-- ..||.+ .-+++||+.+.+.++.+.+++ +..|++ .+|.. .+
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~----~~la~~-----~~~V~gvD~s~~al~~A~~n~----~~~~~~~v~f~~--~d 342 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFT----LPLATQ-----AASVVGVEGVPALVEKGQQNA----RLNGLQNVTFYH--EN 342 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTH----HHHHTT-----SSEEEEEESCHHHHHHHHHHH----HHTTCCSEEEEE--CC
T ss_pred HHHhhcCCCCCEEEECCCCCCHHH----HHHHhh-----CCEEEEEeCCHHHHHHHHHHH----HHcCCCceEEEE--CC
Confidence 334443334457999999988633 345544 247999999998888877664 445664 55553 22
Q ss_pred ccc-cCccccccCCCceEEEeeecccccccCCCchHHHHHHHhcCCcEEEEec
Q 014896 217 VGN-LDPERLNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQRLAPKVVTVVE 268 (416)
Q Consensus 217 ~e~-l~~~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir~L~P~vvtlvE 268 (416)
+++ +....+.-..=+++++|-- ..+. ..++..+..++|+.++.+.
T Consensus 343 ~~~~l~~~~~~~~~fD~Vv~dPP------r~g~-~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 343 LEEDVTKQPWAKNGFDKVLLDPA------RAGA-AGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp TTSCCSSSGGGTTCCSEEEECCC------TTCC-HHHHHHHHHHCCSEEEEEE
T ss_pred HHHHhhhhhhhcCCCCEEEECCC------CccH-HHHHHHHHhcCCCeEEEEE
Confidence 322 1110111112245554421 1122 3677888889999887664
No 107
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=62.28 E-value=8.9 Score=35.74 Aligned_cols=35 Identities=14% Similarity=0.036 Sum_probs=25.1
Q ss_pred EEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHH
Q 014896 149 HIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEA 192 (416)
Q Consensus 149 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~ 192 (416)
.|+|+|.|.|. +...|+.+- -++|||+.+...++.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~~-----~~v~gvD~s~~ml~~ 76 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEFF-----ERVHAVDPGEAQIRQ 76 (257)
T ss_dssp EEEEESCTTTT----THHHHHTTC-----SEEEEEESCHHHHHT
T ss_pred CEEEEcCCCCH----HHHHHHHhC-----CEEEEEeCcHHhhhh
Confidence 58999999884 344556542 379999999776654
No 108
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=61.84 E-value=6.4 Score=34.09 Aligned_cols=54 Identities=22% Similarity=0.233 Sum_probs=28.5
Q ss_pred HHHhhhc-CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 138 IQEAFER-EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 138 ILeA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
+++.+.. .+.-+|+|+|.|.|.-- ..|+.+. |..++|||+.+...++.+.+++.
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~----~~l~~~~---~~~~v~~vD~~~~~~~~a~~~~~ 75 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIA----VSIALAC---PGVSVTAVDLSMDALAVARRNAE 75 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHH----HHHHHHC---TTEEEEEEECC------------
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHH----HHHHHhC---CCCeEEEEECCHHHHHHHHHHHH
Confidence 4444444 56789999999988533 3333331 45799999998877766665544
No 109
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=61.80 E-value=5.9 Score=37.26 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=36.1
Q ss_pred HHHhhhcC--CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 138 IQEAFERE--DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 138 ILeA~~g~--~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
+++.+... +.-.|+|+|.+.|. +...|+.+-+ ..+||||+.+...++.+.+++...
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEESCHHHHHHHHHTC---
T ss_pred HHHhhhhhhcCCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECCCHHHHHHHHHHHHhh
Confidence 34444333 45589999999983 4445554432 248999999988888887776554
No 110
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=61.54 E-value=9.8 Score=34.78 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=58.2
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccc
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAE 215 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~ 215 (416)
+.|++.+.-...-+|+|+|.|.|. +...|+. |..++|||+.+...++.+.++. ..+|.. .
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~~~~~a~~~~---------~~~~~~--~ 83 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSIVMRQQAVVHP---------QVEWFT--G 83 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCHHHHHSSCCCT---------TEEEEC--C
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCHHHHHHHHhcc---------CCEEEE--C
Confidence 445666655566789999999886 3444453 3468999999876554332221 344432 2
Q ss_pred cccccCccccccCCCceEEEee-ecccccccCCCchHHHHH-HHhcCCc-EEEEeccCCC
Q 014896 216 KVGNLDPERLNISKREAVAVHW-LQHSLYDVTGSDTNTLCL-LQRLAPK-VVTVVEQDLS 272 (416)
Q Consensus 216 ~~e~l~~~~l~~~~~EalaVn~-l~h~l~~~~~~~~~~L~~-ir~L~P~-vvtlvE~ea~ 272 (416)
.++++... -..=+.++.+. ++|. .....+|.. .+.|+ . .+++++.+..
T Consensus 84 d~~~~~~~---~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~Lk-gG~~~~~~~~~~ 134 (261)
T 3ege_A 84 YAENLALP---DKSVDGVISILAIHHF-----SHLEKSFQEMQRIIR-DGTIVLLTFDIR 134 (261)
T ss_dssp CTTSCCSC---TTCBSEEEEESCGGGC-----SSHHHHHHHHHHHBC-SSCEEEEEECGG
T ss_pred chhhCCCC---CCCEeEEEEcchHhhc-----cCHHHHHHHHHHHhC-CcEEEEEEcCCc
Confidence 33333211 11224444443 5554 233455554 46677 6 3666665443
No 111
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=61.51 E-value=31 Score=32.68 Aligned_cols=137 Identities=9% Similarity=0.037 Sum_probs=70.4
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHH-cCC-CeEEEeccccccc-cCc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEK-LGL-PFEFCPVAEKVGN-LDP 222 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~-lgv-pFeF~~v~~~~e~-l~~ 222 (416)
+.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+.+.++.+.+++...... ++- .++|.. ....+ +..
T Consensus 83 ~~~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~--~D~~~~l~~ 153 (294)
T 3adn_A 83 HAKHVLIIGGGDGA----MLREVTRH---KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVI--DDGVNFVNQ 153 (294)
T ss_dssp TCCEEEEESCTTCH----HHHHHHTC---TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEEC--SCSCC---C
T ss_pred CCCEEEEEeCChhH----HHHHHHhC---CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEE--ChHHHHHhh
Confidence 34589999999885 55666655 35578999999988888888777665421 111 233321 11111 110
Q ss_pred cccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014896 223 ERLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLG 296 (416)
Q Consensus 223 ~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFDsLd 296 (416)
.-..=++++++...+......-....++.. -+.|+|.-++++..+.... -.+.+.+.+......|....
T Consensus 154 ---~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~--~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 154 ---TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL--QQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp ---CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSS--CCHHHHHHHHHHHHHCSEEE
T ss_pred ---cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCccc--chHHHHHHHHHHHHHCCCeE
Confidence 001224566654322111100112456655 4779999777665432111 12445555555566676655
No 112
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=60.74 E-value=15 Score=32.62 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=52.6
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
..-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++. .+...+|... .+.++.
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~--d~~~~~---- 111 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDISEVMIQKGKERG------EGPDLSFIKG--DLSSLP---- 111 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHTTT------CBTTEEEEEC--BTTBCS----
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHhhc------ccCCceEEEc--chhcCC----
Confidence 44589999999885 45556655 2 38999999887776655442 1233444432 233332
Q ss_pred ccCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 226 NISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 226 ~~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..++ ++++.+ .++|. .....+|.. .+.|+|.-++++
T Consensus 112 -~~~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 112 -FENEQFEAIMAINSLEWT-----EEPLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp -SCTTCEEEEEEESCTTSS-----SCHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCCCccEEEEcChHhhc-----cCHHHHHHHHHHHhCCCeEEEE
Confidence 1122 333333 35553 233455554 577999765443
No 113
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=60.69 E-value=27 Score=33.01 Aligned_cols=114 Identities=7% Similarity=-0.060 Sum_probs=61.5
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEeccccccccCccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~v~~~~e~l~~~~ 224 (416)
+.-.|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++..+++.++- .++|.. ....++...
T Consensus 95 ~~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~~~~- 164 (304)
T 3bwc_A 95 KPERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV--GDGLAFVRQ- 164 (304)
T ss_dssp SCCEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHHHS-
T ss_pred CCCeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHHHHh-
Confidence 34579999998875 55566655 34579999999998888888877666554322 244432 111111000
Q ss_pred cccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEecc
Q 014896 225 LNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQ 269 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ 269 (416)
..-..=++++++...+......--...++.. .+.|+|.-++++..
T Consensus 165 ~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 0001125666665322111100012456655 47799987766553
No 114
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=60.62 E-value=19 Score=30.16 Aligned_cols=53 Identities=23% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.+++.+.-...-+|+|+|.|.|. +...++.+. .++|+|+.+...++.+.+++.
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNPEAISTTEMNLQ 76 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCHHHHHHHHHHHH
Confidence 34444444455689999998874 334455442 589999999887877766554
No 115
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=60.39 E-value=12 Score=32.55 Aligned_cols=97 Identities=15% Similarity=0.061 Sum_probs=54.9
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCcccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~~l 225 (416)
.-+|+|+|.|.|.--..|.+.+ |..++|+|+.+...++.+.+++ +..|++ .+|.. ..+.++.+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~~--~d~~~~~~~-- 130 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGKRVRFLRQVQ----HELKLENIEPVQ--SRVEEFPSE-- 130 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHHHHHHHHHHH----HHTTCSSEEEEE--CCTTTSCCC--
T ss_pred CCeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHHHHHHHHHHH----HHcCCCCeEEEe--cchhhCCcc--
Confidence 3489999999997554444432 3468999999988777665554 345664 55543 233333211
Q ss_pred ccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEEec
Q 014896 226 NISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVE 268 (416)
Q Consensus 226 ~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE 268 (416)
..=++++.|.+ .....++..+ +.|+|.-.++++
T Consensus 131 --~~~D~i~~~~~--------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 131 --PPFDGVISRAF--------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp --SCEEEEECSCS--------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred --CCcCEEEEecc--------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 11133333321 1233555554 568888666655
No 116
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=60.30 E-value=16 Score=30.27 Aligned_cols=102 Identities=14% Similarity=-0.022 Sum_probs=54.9
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERL 225 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l 225 (416)
+.-+|+|+|.|.|. +...|+.+ ++ . +|||+.+...++.+.+++.. .++..+|.. ..+.+..+ .+
T Consensus 41 ~~~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~~-~~ 104 (171)
T 1ws6_A 41 RRGRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKDPEAVRLLKENVRR----TGLGARVVA--LPVEVFLP-EA 104 (171)
T ss_dssp TCCEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCCHHHHHHHHHHHHH----HTCCCEEEC--SCHHHHHH-HH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCCHHHHHHHHHHHHH----cCCceEEEe--ccHHHHHH-hh
Confidence 34479999999884 44455544 22 3 99999998888777766543 344444432 22222100 00
Q ss_pred ccC--CCceEEEeeecccccccCCCchHHHHHH---HhcCCcEEEEecc
Q 014896 226 NIS--KREAVAVHWLQHSLYDVTGSDTNTLCLL---QRLAPKVVTVVEQ 269 (416)
Q Consensus 226 ~~~--~~EalaVn~l~h~l~~~~~~~~~~L~~i---r~L~P~vvtlvE~ 269 (416)
.-. .=++++.|...| .....++..+ +-|+|.-+++++.
T Consensus 105 ~~~~~~~D~i~~~~~~~------~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA------MDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp HHTTCCEEEEEECCCTT------SCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred hccCCceEEEEECCCCc------hhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 000 113444454333 2234555554 5589987666554
No 117
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=59.92 E-value=27 Score=30.00 Aligned_cols=99 Identities=12% Similarity=0.100 Sum_probs=54.3
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCccccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPERLN 226 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~~l~ 226 (416)
.-+|+|+|.|.|.-...++. . ++ .++|||+.+...++.+.+++.+ .+..++|.. ..+.++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~---~-~~----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~----- 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFV---E-DG----YKTYGIEISDLQLKKAENFSRE----NNFKLNISK--GDIRKLP----- 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHH---H-TT----CEEEEEECCHHHHHHHHHHHHH----HTCCCCEEE--CCTTSCC-----
T ss_pred CCEEEEECCCCCHHHHHHHH---h-CC----CEEEEEECCHHHHHHHHHHHHh----cCCceEEEE--CchhhCC-----
Confidence 45899999988764444432 2 22 4899999998888777766543 233344432 2233322
Q ss_pred cCCC--ceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 227 ISKR--EAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 227 ~~~~--EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
..++ ++++.+ .++|+. ......+|.. .+.|+|.-++++
T Consensus 85 ~~~~~fD~v~~~~~l~~~~---~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMR---KNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp SCTTCEEEEEECSCGGGSC---HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCC---HHHHHHHHHHHHHHcCCCcEEEE
Confidence 1122 333333 356641 1123445544 477999855443
No 118
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=59.69 E-value=15 Score=31.75 Aligned_cols=45 Identities=16% Similarity=0.098 Sum_probs=32.0
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
+.-+|+|+|.|.|. +...|+.+ +.-++|||+.+...++.+.+++.
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~----~~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLL----GAESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHT----TBSEEEEEESCHHHHHHHHHHCT
T ss_pred CCCEEEEEeCCccH----HHHHHHHc----CCCEEEEEECCHHHHHHHHHhcC
Confidence 34589999999886 44455555 12479999999888877766553
No 119
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=57.96 E-value=25 Score=30.15 Aligned_cols=108 Identities=16% Similarity=0.056 Sum_probs=58.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEeccccccccCccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~v~~~~e~l~~~~ 224 (416)
+.-+|+|+|.|.|.- ...++.+ +.-++|||+.+...++.+.+++. ..|+ ..+|.. .++.++...
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~----~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~v~~~~--~d~~~~~~~- 108 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSR----GAASVLFVESDQRSAAVIARNIE----ALGLSGATLRR--GAVAAVVAA- 108 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHT----TCSEEEEEECCHHHHHHHHHHHH----HHTCSCEEEEE--SCHHHHHHH-
T ss_pred CCCEEEEeCCCcCHH----HHHHHHC----CCCeEEEEECCHHHHHHHHHHHH----HcCCCceEEEE--ccHHHHHhh-
Confidence 344799999998842 2223333 23489999999888877776654 3455 244442 222222110
Q ss_pred cccCCCceEEEeeecccccccCCCchHHHHHHH---hcCCcEEEEeccCC
Q 014896 225 LNISKREAVAVHWLQHSLYDVTGSDTNTLCLLQ---RLAPKVVTVVEQDL 271 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~ir---~L~P~vvtlvE~ea 271 (416)
+.-..=+.++.|...|.. ......++..+. -|+|.-+++++.+.
T Consensus 109 ~~~~~fD~i~~~~p~~~~---~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 109 GTTSPVDLVLADPPYNVD---SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CCSSCCSEEEECCCTTSC---HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred ccCCCccEEEECCCCCcc---hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 001122455556433221 012345666665 49999887777544
No 120
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=57.32 E-value=17 Score=34.25 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=43.3
Q ss_pred ccCCccchhH-HHHhH----HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 122 GISPFVKFSH-FTANQ----AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 122 ~~~P~~kfa~-~taNq----aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.+.|=-+++. |..|+ .|++++.-... +|+|+|.|.|. |-..|+.+. -++|+|+.+.+.++.+.++
T Consensus 18 ~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~~~~~l~~~ 87 (271)
T 3fut_A 18 GLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLRLRPVLEET 87 (271)
T ss_dssp TCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGGGHHHHHHH
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHHHHHHHHHh
Confidence 3445555554 33444 45555554556 99999998885 666777662 3699999988777666555
Q ss_pred H
Q 014896 197 L 197 (416)
Q Consensus 197 L 197 (416)
+
T Consensus 88 ~ 88 (271)
T 3fut_A 88 L 88 (271)
T ss_dssp T
T ss_pred c
Confidence 4
No 121
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=57.25 E-value=42 Score=31.22 Aligned_cols=136 Identities=12% Similarity=0.006 Sum_probs=72.8
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEeccccccc-cCcc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCPVAEKVGN-LDPE 223 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~v~~~~e~-l~~~ 223 (416)
+.-+|+|+|.|.|. +...++.++ |.-++|+|+.+...++.+.+++..++..++- .+++.. ....+ +...
T Consensus 75 ~~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~--~D~~~~l~~~ 145 (275)
T 1iy9_A 75 NPEHVLVVGGGDGG----VIREILKHP---SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV--DDGFMHIAKS 145 (275)
T ss_dssp SCCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE--SCSHHHHHTC
T ss_pred CCCEEEEECCchHH----HHHHHHhCC---CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHHHhhC
Confidence 34579999999883 555666553 4568999999998888888877766433321 244432 11111 1100
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSL 295 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFDsL 295 (416)
-..=++++++...+......-....++.. .+.|+|.-++++...... .-...+.+.+.....+|...
T Consensus 146 ---~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~~~~l~~~F~~v 213 (275)
T 1iy9_A 146 ---ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPW--FTPELITNVQRDVKEIFPIT 213 (275)
T ss_dssp ---CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTT--TCHHHHHHHHHHHHTTCSEE
T ss_pred ---CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc--ccHHHHHHHHHHHHHhCCCe
Confidence 01225566654322111000012456654 578999988777643211 11445555555555555543
No 122
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=56.84 E-value=9.5 Score=35.57 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=38.4
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
-..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.+
T Consensus 72 ~~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~~~ 126 (299)
T 3g2m_A 72 AREFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELSTSVLAAFRKRLAE 126 (299)
T ss_dssp HHHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHHHHhh
Confidence 3455666654444 89999999987 44455555 2 4799999998888877766543
No 123
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=55.29 E-value=58 Score=30.58 Aligned_cols=136 Identities=10% Similarity=-0.053 Sum_probs=72.7
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcC-CCeEEEeccccccc-cCccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLG-LPFEFCPVAEKVGN-LDPER 224 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lg-vpFeF~~v~~~~e~-l~~~~ 224 (416)
.-+|+|+|.|.|. +...++.+. |.-+||+|+.+...++.+.+++..++..++ -.+++.. ....+ +..
T Consensus 91 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~l~~-- 159 (296)
T 1inl_A 91 PKKVLIIGGGDGG----TLREVLKHD---SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI--ANGAEYVRK-- 159 (296)
T ss_dssp CCEEEEEECTTCH----HHHHHTTST---TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHGGG--
T ss_pred CCEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHHHhh--
Confidence 3589999999884 555666553 457899999999888888888776654442 2344442 11111 110
Q ss_pred cccCCCceEEEeeecc-cccccCCCchHHHHH-HHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014896 225 LNISKREAVAVHWLQH-SLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLG 296 (416)
Q Consensus 225 l~~~~~EalaVn~l~h-~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFDsLd 296 (416)
.-..=++++++...+ .-....-....++.. .+.|+|.-+++++..... .-...+.+.+......|....
T Consensus 160 -~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~~~~~l~~~F~~v~ 230 (296)
T 1inl_A 160 -FKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF--YDIGWFKLAYRRISKVFPITR 230 (296)
T ss_dssp -CSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT--TTHHHHHHHHHHHHHHCSEEE
T ss_pred -CCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc--cCHHHHHHHHHHHHHHCCceE
Confidence 001125566654322 100000012456655 477999988777632211 123455555555556665443
No 124
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=54.78 E-value=16 Score=31.03 Aligned_cols=52 Identities=27% Similarity=0.307 Sum_probs=36.1
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEe
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCP 212 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~ 212 (416)
-+|+|+|.|.|. +...|+.+ .-++|||+.+...++.+.+++.+ .|+ ..+|..
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-----~~~v~~vD~s~~~l~~a~~~~~~----~~~~~v~~~~ 76 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-----SKKVYAFDVQEQALGKTSQRLSD----LGIENTELIL 76 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-----SSEEEEEESCHHHHHHHHHHHHH----HTCCCEEEEE
T ss_pred CEEEEEcCCCCH----HHHHHHHh-----CCEEEEEECCHHHHHHHHHHHHH----cCCCcEEEEe
Confidence 379999999885 33345655 35899999999888887766654 354 255543
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=54.66 E-value=30 Score=29.65 Aligned_cols=45 Identities=27% Similarity=0.259 Sum_probs=30.7
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
-.|+|+|.|.|. +...|+.+.+ |.-++|||+.+...++.+.+++.
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s~~~~~~a~~~~~ 68 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQDKAIANTTKKLT 68 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHH
Confidence 479999999884 3333443311 22389999999888887776654
No 126
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=52.84 E-value=32 Score=31.12 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=30.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
..-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~l~~a~~~ 95 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPSKEMLEVAREK 95 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCCHHHHHHHHhh
Confidence 45689999999885 44556655 2 3899999998877766554
No 127
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=52.40 E-value=26 Score=31.42 Aligned_cols=57 Identities=12% Similarity=-0.013 Sum_probs=39.7
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
.|++.+.-...-+|+|+|.|.|.--..|.+.+ .|..++++++.+.+.++.+.+++.+
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~~~~~~a~~~~~~ 140 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIREDFAKLAWENIKW 140 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCHHHHHHHHHHHHH
Confidence 56666665566689999999885433343333 1446899999998888877766544
No 128
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=52.29 E-value=21 Score=33.80 Aligned_cols=67 Identities=12% Similarity=0.127 Sum_probs=43.1
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEE
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFC 211 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~ 211 (416)
-..+++.+.-...-+|+|+|.|.|. +...|+.+ +++.-++|||+.+.+.++.+.+++ +..|++ .+|.
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~----~~~g~~~v~~~ 131 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSRKICEIAKRNV----ERLGIENVIFV 131 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCHHHHHHHHHHH----HHcCCCCeEEE
Confidence 3456666655556689999998774 33444433 222468999999988887776655 345654 4444
No 129
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=52.13 E-value=83 Score=29.01 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=29.6
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCC-CHHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT-SMEALEATGKRL 197 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~-~~~~l~~tg~rL 197 (416)
.-.|+|+|.|.|.- + ..|+.+ |. -++|+|+. +.+.++.+.+++
T Consensus 80 ~~~vLDlG~G~G~~--~--~~~a~~--~~--~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 80 GKTVCELGAGAGLV--S--IVAFLA--GA--DQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp TCEEEETTCTTSHH--H--HHHHHT--TC--SEEEEEECSCHHHHHHHHHHH
T ss_pred CCeEEEecccccHH--H--HHHHHc--CC--CEEEEEeCCCHHHHHHHHHHH
Confidence 34799999998842 2 245544 21 38999999 788777776655
No 130
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=51.67 E-value=26 Score=31.39 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=31.9
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.+.-.|+|+|.|.|.-= ..|+.+ ++ -++|||+.+...++.+.+++.
T Consensus 55 ~~~~~vLDlGcG~G~~~----~~l~~~--~~--~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQ----LLSACE--SF--TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp CCEEEEEEESCTTCCGG----GTTGGG--TE--EEEEEEESCHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCccHHH----HHHhhc--cc--CeEEEecCCHHHHHHHHHHHh
Confidence 55678999999987421 123322 22 589999999888887776653
No 131
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=51.50 E-value=35 Score=28.58 Aligned_cols=104 Identities=16% Similarity=0.047 Sum_probs=55.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEeccccccccCcc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAEKVGNLDPE 223 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~~~e~l~~~ 223 (416)
+.-.|+|+|.|.|. +...++.+ +.-++|||+.+.+.++.+.+++ +..|++ .+|.. ..+.+..+.
T Consensus 31 ~~~~vLDlGcG~G~----~~~~l~~~----~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~~~--~d~~~~~~~ 96 (177)
T 2esr_A 31 NGGRVLDLFAGSGG----LAIEAVSR----GMSAAVLVEKNRKAQAIIQDNI----IMTKAENRFTLLK--MEAERAIDC 96 (177)
T ss_dssp CSCEEEEETCTTCH----HHHHHHHT----TCCEEEEECCCHHHHHHHHHHH----HTTTCGGGEEEEC--SCHHHHHHH
T ss_pred CCCeEEEeCCCCCH----HHHHHHHc----CCCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEEE--CcHHHhHHh
Confidence 34479999999885 33345555 2358999999988887766654 345654 44442 222221000
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHHH---HhcCCcEEEEeccC
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCLL---QRLAPKVVTVVEQD 270 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i---r~L~P~vvtlvE~e 270 (416)
+ -..=++++.|...|. .....++..+ +-|+|.-+++++..
T Consensus 97 -~-~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 97 -L-TGRFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp -B-CSCEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -h-cCCCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 0 011134444432221 1123455554 66899877665543
No 132
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=50.94 E-value=30 Score=30.39 Aligned_cols=61 Identities=8% Similarity=-0.024 Sum_probs=39.3
Q ss_pred HHHHhhh--cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 137 AIQEAFE--REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 137 aILeA~~--g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
.+++.+. -...-+|+|+|.+.|..-..|.+.+..+ ..|..++|+|+.+.+.++.+.+++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~~~~~~~~a~~~~~~ 131 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLERVKDLVNFSLENIKR 131 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4556553 2345689999999885444443333111 12556999999998888887776654
No 133
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=50.54 E-value=37 Score=32.51 Aligned_cols=136 Identities=7% Similarity=-0.007 Sum_probs=69.8
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHc-CCCeEEEeccccccc-cCcc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKL-GLPFEFCPVAEKVGN-LDPE 223 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~l-gvpFeF~~v~~~~e~-l~~~ 223 (416)
+.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++...+..+ +-.++|.. ....+ +..
T Consensus 108 ~~~~VLdIG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~--~D~~~~l~~- 177 (314)
T 2b2c_A 108 DPKRVLIIGGGDGG----ILREVLKH---ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC--GDGFEFLKN- 177 (314)
T ss_dssp SCCEEEEESCTTSH----HHHHHTTC---TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC--SCHHHHHHH-
T ss_pred CCCEEEEEcCCcCH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE--ChHHHHHHh-
Confidence 34589999999884 55556655 356799999999888877777654332222 11244432 11111 110
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHHhh
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSL 295 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFDsL 295 (416)
.-..=++++++...+.-....--...++.. .+.|+|.-+++++.+... .-...+.....+...+|...
T Consensus 178 --~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~~~~~l~~vF~~v 246 (314)
T 2b2c_A 178 --HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW--LHLPLIAHLVAFNRKIFPAV 246 (314)
T ss_dssp --CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTT--TCHHHHHHHHHHHHHHCSEE
T ss_pred --cCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc--cCHHHHHHHHHHHHHHCCcc
Confidence 001225666665433210000011355554 477999988777643211 12344555666666677654
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=49.74 E-value=22 Score=32.62 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=42.3
Q ss_pred HHHhHHHHHhhhc--CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeE
Q 014896 132 FTANQAIQEAFER--EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFE 209 (416)
Q Consensus 132 ~taNqaILeA~~g--~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFe 209 (416)
.-+.+.++++++. ...-+|+|+|.|.|. +...++.+ |+ +++||+.+...++.+.+++ +..|++++
T Consensus 104 ~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~~v~~a~~n~----~~~~~~v~ 170 (254)
T 2nxc_A 104 HETTRLALKALARHLRPGDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPMVLPQAEANA----KRNGVRPR 170 (254)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGGGHHHHHHHH----HHTTCCCE
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHHHHHHHHHHH----HHcCCcEE
Confidence 3344555555542 334589999998885 33345544 33 9999999888777776654 34566544
Q ss_pred EE
Q 014896 210 FC 211 (416)
Q Consensus 210 F~ 211 (416)
|.
T Consensus 171 ~~ 172 (254)
T 2nxc_A 171 FL 172 (254)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 135
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=49.51 E-value=19 Score=32.36 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=38.3
Q ss_pred cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC---eEEE
Q 014896 144 REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP---FEFC 211 (416)
Q Consensus 144 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp---FeF~ 211 (416)
.++.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.+...++.+.+++ +..|+. ++|.
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~~~~~a~~~~----~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 54 GNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESEHQRQAKALF----REAGYSPSRVRFL 114 (221)
T ss_dssp CTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHHHHHHHHHHH----HHTTCCGGGEEEE
T ss_pred CCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHH----HHcCCCcCcEEEE
Confidence 3445689999998876444444443 23468999999988777766554 455665 4544
No 136
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=49.36 E-value=29 Score=30.49 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=38.7
Q ss_pred HHHHhhh--cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 137 AIQEAFE--REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 137 aILeA~~--g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
.+++.+. -...-+|+|+|.+.|..-..|.+.+ .|..++|+|+.+...++.+.+++.+
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~------~~~~~v~~vD~s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV------GCTGKVIGIDHIKELVDDSVNNVRK 124 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH------CTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh------CCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 4556554 2345689999999886544444433 1345899999998888877766654
No 137
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=49.29 E-value=82 Score=28.56 Aligned_cols=47 Identities=15% Similarity=0.057 Sum_probs=31.9
Q ss_pred cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 144 REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 144 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
..+.-+|+|+|.|.|.. ++ .++ +.+ .-+||||+.+...++.+.+++.
T Consensus 53 ~~~g~~vLDiGCG~G~~--~~--~~~-~~~---~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIY--QV--LAA-CDS---FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp SCCEEEEEESSCTTCCG--GG--TTG-GGT---EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHH--HH--HHH-Hhh---hcceeeccccHHHHHHHHHHHh
Confidence 34677899999998742 11 112 211 2379999999998888877653
No 138
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=49.14 E-value=44 Score=30.96 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=38.8
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|+|+.+.+.++.+.+++.
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECCHHHHHHHHHHHT
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECCHHHHHHHHHHHh
Confidence 46666665556689999999886 556677662 379999999887777666654
No 139
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=48.97 E-value=22 Score=31.35 Aligned_cols=53 Identities=19% Similarity=0.237 Sum_probs=36.4
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
..|.+.+.....-+|+|+|.|.|. +...|+.+ |. -++|||+.+...++.+.++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s~~~~~~a~~~ 85 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLSEKMLARARAA 85 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHHHHHHHHHT
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCCHHHHHHHHHh
Confidence 456666665556689999999885 34455555 22 1899999988777665544
No 140
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=48.71 E-value=77 Score=31.10 Aligned_cols=117 Identities=18% Similarity=0.127 Sum_probs=65.5
Q ss_pred HhHHHHHhhhc------CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC
Q 014896 134 ANQAIQEAFER------EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP 207 (416)
Q Consensus 134 aNqaILeA~~g------~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp 207 (416)
..+.+++.+.. .+.-+|+|+|.|.|.- ...|+.+ + .++|+|+.+...++.+.+++. ..|+.
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDis~~al~~A~~n~~----~~~~~ 281 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVEDDLASVLSLQKGLE----ANALK 281 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEESBHHHHHHHHHHHH----HTTCC
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEECCHHHHHHHHHHHH----HcCCC
Confidence 44566666632 2456899999998853 3344444 2 389999999888887776653 45666
Q ss_pred eEEEeccccccccCccccccCCCceEEEeeeccccccc-CCCchHHHHH-HHhcCCcEEEEec
Q 014896 208 FEFCPVAEKVGNLDPERLNISKREAVAVHWLQHSLYDV-TGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 208 FeF~~v~~~~e~l~~~~l~~~~~EalaVn~l~h~l~~~-~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
.+|.. .++.+.... -..=++++.|...|..... ......++.. .+.|+|.-.+++.
T Consensus 282 v~~~~--~D~~~~~~~---~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 282 AQALH--SDVDEALTE---EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CEEEE--CSTTTTSCT---TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEE--cchhhcccc---CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 55543 223332111 0122566667543321111 1112344443 5779998665544
No 141
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=48.65 E-value=43 Score=30.38 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=39.8
Q ss_pred HHHHHhhhc-C-CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC
Q 014896 136 QAIQEAFER-E-DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP 207 (416)
Q Consensus 136 qaILeA~~g-~-~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp 207 (416)
..+|.++.. . ..-.|+|+|.|.|. +...|+.+. +. +||||+.+...++.+.+++. ..|+.
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~~~~~~~a~~n~~----~~~~~ 98 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQERLADMAKRSVA----YNQLE 98 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCSHHHHHHHHHHHH----HTTCT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECCHHHHHHHHHHHH----HCCCc
Confidence 344444433 3 45689999999884 445667663 22 89999999888877766553 44554
No 142
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=48.58 E-value=31 Score=32.77 Aligned_cols=72 Identities=7% Similarity=-0.033 Sum_probs=51.2
Q ss_pred CCccchhHHHHhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHH
Q 014896 124 SPFVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFA 201 (416)
Q Consensus 124 ~P~~kfa~~taNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A 201 (416)
-+-.++.|-.....|++.+.-...-.|+|+|.+.|.-=..|.+.+ .|.-++++|+.+...++.+.+++.++-
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~------g~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (336)
T 2b25_A 83 KRGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAV------GSQGRVISFEVRKDHHDLAKKNYKHWR 154 (336)
T ss_dssp CCSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHH------CTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHh------CCCceEEEEeCCHHHHHHHHHHHHHhh
Confidence 344556677767778887765555689999999886444444333 135689999999988888888877654
No 143
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=48.39 E-value=43 Score=28.03 Aligned_cols=46 Identities=17% Similarity=0.041 Sum_probs=31.4
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
+.-+|+|+|.|.|.-- ..++.++ .-++|||+.+...++.+.+++..
T Consensus 44 ~~~~vLD~GcG~G~~~----~~~~~~~----~~~v~~vD~~~~~~~~a~~~~~~ 89 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLA----IEAVSRG----MDKSICIEKNFAALKVIKENIAI 89 (187)
T ss_dssp SSCEEEETTCTTCHHH----HHHHHTT----CSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCccCHHH----HHHHHcC----CCEEEEEECCHHHHHHHHHHHHH
Confidence 3448999999988532 2233332 35899999998888777666543
No 144
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=48.18 E-value=14 Score=35.39 Aligned_cols=56 Identities=23% Similarity=0.394 Sum_probs=40.5
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
+++.+.-...=+|+|.|.|.|..-..|++.+ |.-++|||+.+.+.++.+.+++..+
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~-------~~~~VigvD~d~~al~~A~~~~~~~ 73 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHC-------PGCRIIGIDVDSEVLRIAEEKLKEF 73 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHC-------TTCEEEEEESCHHHHHHHHHHTGGG
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHHHhc
Confidence 3455543334489999999987766666654 1358999999999999888887554
No 145
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=48.05 E-value=19 Score=37.44 Aligned_cols=55 Identities=25% Similarity=0.375 Sum_probs=40.3
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcC-CCeEEEec
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLG-LPFEFCPV 213 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lg-vpFeF~~v 213 (416)
+-+.|+|+|.|.|. |-..||.+ | -++|||+.+...++.+.. .|+.-| +..+|...
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~~~~~i~~a~~----~a~~~~~~~~~~~~~ 121 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDFQQENINVCRA----LAEENPDFAAEFRVG 121 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHH----HHHTSTTSEEEEEEC
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECCCHHHHHHHHH----HHHhcCCCceEEEEC
Confidence 45889999999885 67788876 3 279999999888877643 455555 56777753
No 146
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=47.25 E-value=27 Score=32.10 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=37.1
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEE
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFC 211 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~ 211 (416)
...-+|+|+|.|.|.-= ..|+.+. |..++|||+.+...++.+.+++. ..|++ .+|.
T Consensus 108 ~~~~~vLDlG~GsG~~~----~~la~~~---~~~~v~~vD~s~~~l~~a~~n~~----~~~~~~v~~~ 164 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIA----LALASER---PDCEIIAVDRMPDAVSLAQRNAQ----HLAIKNIHIL 164 (276)
T ss_dssp SSCCEEEEETCTTSHHH----HHHHHHC---TTSEEEEECSSHHHHHHHHHHHH----HHTCCSEEEE
T ss_pred cCCCEEEEecCCccHHH----HHHHHhC---CCCEEEEEECCHHHHHHHHHHHH----HcCCCceEEE
Confidence 34568999999988633 3344221 34689999999888887776654 34664 4443
No 147
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=46.97 E-value=19 Score=33.33 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=31.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
+.-+|+|+|.|.|. +..++ +.++ .-+||||+.+...++.+.+++.
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~---~~~~----~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLS---ACSH----FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTT---GGGG----CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcCh-HHHHh---hccC----CCeEEEeCCCHHHHHHHHHHHh
Confidence 45689999999998 54332 2221 2389999999888887777653
No 148
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=46.74 E-value=28 Score=30.49 Aligned_cols=55 Identities=16% Similarity=0.167 Sum_probs=36.6
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
.-+|+|+|.+.|.-- ..|+.+- |+..++|+|+.+...++.+.+++ +..|++ .+|.
T Consensus 65 ~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~ 121 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSA----IAMGLAL--PKDGTLITCDVDEKSTALAKEYW----EKAGLSDKIGLR 121 (225)
T ss_dssp CSEEEEECCTTSHHH----HHHHTTC--CTTCEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE
T ss_pred CCEEEEeCCcchHHH----HHHHHhC--CCCCEEEEEeCCHHHHHHHHHHH----HHCCCCCceEEE
Confidence 348999999988532 2344432 23579999999988887776654 345654 5554
No 149
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=46.39 E-value=34 Score=30.53 Aligned_cols=59 Identities=8% Similarity=0.036 Sum_probs=39.7
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
..|++.+.-...-+|+|+|.+.|.--..|.+.+ .|.-++++++.+...++.+.+++...
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~~~~~~a~~~~~~~ 144 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV------GEKGLVESYEARPHHLAQAERNVRAF 144 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh------CCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 456666655556689999999885333333333 13458999999988887777665443
No 150
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=46.23 E-value=29 Score=29.48 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=26.9
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHH
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEA 192 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~ 192 (416)
-.|+|+|.|.|. +...|+.+. ++|||+.+...++.
T Consensus 25 ~~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 25 KIVLDLGTSTGV----ITEQLRKRN------TVVSTDLNIRALES 59 (170)
T ss_dssp CEEEEETCTTCH----HHHHHTTTS------EEEEEESCHHHHHT
T ss_pred CeEEEeccCccH----HHHHHHhcC------cEEEEECCHHHHhc
Confidence 389999999884 555666552 99999998876655
No 151
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=46.10 E-value=37 Score=30.90 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=39.9
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
..|++.+.-...-+|+|+|.+.|.-=..|.+.+ .|..++++|+.+.+.++.+.+++..+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAV------GPAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHh------CCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 456666654555689999999885333333333 13458999999988888877766544
No 152
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=45.98 E-value=31 Score=32.23 Aligned_cols=113 Identities=9% Similarity=0.002 Sum_probs=59.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHc-CCCeEEEeccccccccCccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKL-GLPFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~l-gvpFeF~~v~~~~e~l~~~~ 224 (416)
+.-+|+|+|.|.|. +...++.+ +|.-++|+|+.+...++.+.+++...+..+ +-.+++.. ....+.-..
T Consensus 78 ~~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~l~~- 147 (283)
T 2i7c_A 78 EPKNVLVVGGGDGG----IIRELCKY---KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI--EDASKFLEN- 147 (283)
T ss_dssp SCCEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHHHHHH-
T ss_pred CCCeEEEEeCCcCH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE--CChHHHHHh-
Confidence 34589999998874 55666655 355799999999887777776654332222 11234432 111110000
Q ss_pred cccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEEecc
Q 014896 225 LNISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVEQ 269 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE~ 269 (416)
. -..=++++++...+......--...++..+ +.|+|.-++++..
T Consensus 148 ~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 148 V-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp C-CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred C-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 0 012256666543221111000114566654 6799997777654
No 153
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=45.93 E-value=41 Score=29.66 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=41.7
Q ss_pred HHHHhhh--cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 137 AIQEAFE--REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 137 aILeA~~--g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
.+++.+. -...-+|+|+|.+.|..=..|.+.+... +..|.-++|+|+.+.+.++.+.+++.+.
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAK-GVDADTRIVGIEHQAELVRRSKANLNTD 137 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHS-CCCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccc-cCCccCEEEEEEcCHHHHHHHHHHHHhc
Confidence 4455553 2334589999999887655555544321 2234468999999988888888777654
No 154
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=45.68 E-value=29 Score=31.56 Aligned_cols=50 Identities=18% Similarity=0.225 Sum_probs=36.9
Q ss_pred cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 144 REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 144 g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
..+...|+|+|.|.|. ++..||.+. |...++||+.+...++.+.+++...
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEECCHHHHHHHHHHHHHH
Confidence 4456789999998885 455566553 4568999999999888888777654
No 155
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=44.91 E-value=21 Score=32.16 Aligned_cols=56 Identities=13% Similarity=0.011 Sum_probs=39.1
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEe
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCP 212 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~ 212 (416)
+.-+|+|+|.|.|.--..|.+.. |..++|||+.+...++.+.+++. ..|++ ++|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVDDMCFNYAKKNVE----QNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECCHHHHHHHHHHHH----HcCCCccEEEEE
Confidence 45589999999987555555443 23689999999888887776654 35664 56553
No 156
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=44.78 E-value=30 Score=30.26 Aligned_cols=42 Identities=14% Similarity=0.089 Sum_probs=30.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
..-+|+|+|.|.|.- ...|+.+ | .++|||+.+...++.+.++
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~-g----~~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ-G----YHVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH-C----CEEEEEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC-C----CeEEEEeCCHHHHHHHHHH
Confidence 455899999998843 3445554 2 3899999999888776654
No 157
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=44.37 E-value=41 Score=31.71 Aligned_cols=55 Identities=11% Similarity=0.031 Sum_probs=38.1
Q ss_pred hHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 135 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 135 NqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.+.|++++.-...-.|+|+|.|.|.- ...|+.+ + -++|||+.+...++.+.+++.
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~l----t~~La~~-~----~~v~~vDi~~~~~~~a~~~~~ 85 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNL----TVKLLPL-A----KKVITIDIDSRMISEVKKRCL 85 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTT----HHHHTTT-S----SEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHH----HHHHHhc-C----CEEEEEECCHHHHHHHHHHHH
Confidence 34566666544556899999998864 3455655 2 389999999887777666553
No 158
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=43.48 E-value=31 Score=30.89 Aligned_cols=110 Identities=12% Similarity=0.096 Sum_probs=58.9
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCccc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPER 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~~ 224 (416)
+.-.|+|+|.|.|.- ...||.+. |..+++||+.+...++.+.+++ +..|++ ++|.. ....++-+..
T Consensus 34 ~~~~vLDiGcG~G~~----~~~lA~~~---p~~~v~giD~s~~~l~~a~~~~----~~~~l~nv~~~~--~Da~~~l~~~ 100 (218)
T 3dxy_A 34 EAPVTLEIGFGMGAS----LVAMAKDR---PEQDFLGIEVHSPGVGACLASA----HEEGLSNLRVMC--HDAVEVLHKM 100 (218)
T ss_dssp CCCEEEEESCTTCHH----HHHHHHHC---TTSEEEEECSCHHHHHHHHHHH----HHTTCSSEEEEC--SCHHHHHHHH
T ss_pred CCCeEEEEeeeChHH----HHHHHHHC---CCCeEEEEEecHHHHHHHHHHH----HHhCCCcEEEEE--CCHHHHHHHH
Confidence 455799999998854 33444432 4578999999988887766553 455664 55532 2222211111
Q ss_pred cccCCC--ceEEEeee---cccccc-cCCCchHHHHHH-HhcCCcEEEEeccC
Q 014896 225 LNISKR--EAVAVHWL---QHSLYD-VTGSDTNTLCLL-QRLAPKVVTVVEQD 270 (416)
Q Consensus 225 l~~~~~--EalaVn~l---~h~l~~-~~~~~~~~L~~i-r~L~P~vvtlvE~e 270 (416)
+.++ +.+.+|+. ++.... ..-..+.++..+ +.|+|.-++++..+
T Consensus 101 --~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 101 --IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp --SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred --cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 1122 34444531 111000 011123567665 56999987766543
No 159
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=42.71 E-value=26 Score=29.85 Aligned_cols=54 Identities=20% Similarity=0.330 Sum_probs=40.7
Q ss_pred hhHHHHHHHhhc---c-c---cc-ccHHHHHHHHHHHHhcCCHHHHHHHHHHhccccCCCCCh
Q 014896 21 REKKEEIRQQKR---D-E---EG-LHLLTLLLQCAEAVSADNLEEANKMLLEISQLSTPYGTS 75 (416)
Q Consensus 21 ~~~~~~~~~~~~---~-~---~g-~~L~~lL~~CA~Av~~g~~~~A~~lL~~L~~~asp~Gd~ 75 (416)
+|+.+++++.+. | . .| -.+.+-|-+|+++++.||+..|+.||..-. ...|+||-
T Consensus 32 ~~Tr~qL~~~R~EFWDT~p~~~Gr~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL 93 (137)
T 2ksn_A 32 PMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGAL 93 (137)
T ss_dssp CCSHHHHHHHHHHHHTTSSTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCS
T ss_pred CCCHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcH
Confidence 477777777752 1 2 33 468899999999999999999999987654 44677773
No 160
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=42.60 E-value=60 Score=32.76 Aligned_cols=118 Identities=12% Similarity=0.024 Sum_probs=63.6
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH---HHHHHHcCCC---eE
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL---SDFAEKLGLP---FE 209 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL---~~~A~~lgvp---Fe 209 (416)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+.+...++.+...| .+-++..|+. ++
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 456676655556689999999887655544432 2348999999987776663333 4445556742 55
Q ss_pred EEeccccccccCcccc--ccCCCceEEEeeecccccccCCCchHHH-HHHHhcCCcEEEEec
Q 014896 210 FCPVAEKVGNLDPERL--NISKREAVAVHWLQHSLYDVTGSDTNTL-CLLQRLAPKVVTVVE 268 (416)
Q Consensus 210 F~~v~~~~e~l~~~~l--~~~~~EalaVn~l~h~l~~~~~~~~~~L-~~ir~L~P~vvtlvE 268 (416)
|..- +...+ ...+ ...+=+++++|...+. .....+| .+.+.|+|.-.+++-
T Consensus 305 ~i~g-D~~~~--~~~~~~~~~~FDvIvvn~~l~~-----~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 305 FSLK-KSFVD--NNRVAELIPQCDVILVNNFLFD-----EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EEES-SCSTT--CHHHHHHGGGCSEEEECCTTCC-----HHHHHHHHHHHTTCCTTCEEEES
T ss_pred EEEc-Ccccc--ccccccccCCCCEEEEeCcccc-----ccHHHHHHHHHHhCCCCeEEEEe
Confidence 5321 11111 0001 0123356667632110 1122333 446889998665543
No 161
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=41.94 E-value=26 Score=32.28 Aligned_cols=55 Identities=15% Similarity=0.065 Sum_probs=34.4
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
.+++.+.-...-.|+|+|.+.|.--..|.+.+ .|..++|+|+.+...++.+.+++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~------~~~~~v~~vD~s~~~~~~a~~~~ 155 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL------NGKGTLTVVERDEDNLKKAMDNL 155 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH------TTSSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc------CCCCEEEEEECCHHHHHHHHHHH
Confidence 45555554555689999999886444444433 13458999999988787766554
No 162
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=41.83 E-value=18 Score=32.92 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=56.0
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec--cccccccCc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV--AEKVGNLDP 222 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v--~~~~e~l~~ 222 (416)
.-.|+|+|.+.|.--. .|+.+. ||..+||+|+.+...++.+.+++ +..|++ .+|..- ...+..+..
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s~~~~~~a~~~~----~~~g~~~~v~~~~~d~~~~l~~~~~ 133 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--PADGQLLTLEADAHHAQVARENL----QLAGVDQRVTLREGPALQSLESLGE 133 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEEESCHHHHHHTCCS
T ss_pred CCEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEEEcCHHHHHHhcCC
Confidence 4589999999885433 344332 34579999999988777766554 445665 555431 111111110
Q ss_pred cccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEecc
Q 014896 223 ERLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQ 269 (416)
Q Consensus 223 ~~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ 269 (416)
...=+.++++.- ......++.. .+-|+|.-+++++.
T Consensus 134 ----~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 134 ----CPAFDLIFIDAD-------KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ----CCCCSEEEECSC-------GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ----CCCeEEEEECCc-------hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 011234433221 1122345544 57899998877753
No 163
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=41.72 E-value=46 Score=29.08 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=25.7
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.-.|+|+|.|.|.- ...|+.+ |||+.+...++.+.++
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~---------~~vD~s~~~~~~a~~~ 84 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK---------IGVEPSERMAEIARKR 84 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC---------EEEESCHHHHHHHHHT
T ss_pred CCcEEEeCCCCCHH----HHHHHHH---------hccCCCHHHHHHHHhc
Confidence 44799999998862 3345544 9999988766655544
No 164
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=41.59 E-value=66 Score=28.81 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=35.1
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
+.-.|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~~---~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPAF---PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHHS---TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCH----HHHHHHHhC---CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 45689999999886 333444332 4568999999988888887776655
No 165
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=41.35 E-value=32 Score=30.54 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=54.3
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEeccccccccCccc
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAEKVGNLDPER 224 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~~~e~l~~~~ 224 (416)
.-+|+|+|.+.|.-=.. |+.+. |..++|+|+.+...++.+.+++. ..|+. ++|.. ....+..+..
T Consensus 55 ~~~vLdiG~G~G~~~~~----la~~~---~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~~--~d~~~~~~~~ 121 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIR----MAQAL---PEATIVSIERDERRYEEAHKHVK----ALGLESRIELLF--GDALQLGEKL 121 (233)
T ss_dssp CSEEEEECCTTSHHHHH----HHHHC---TTCEEEEECCCHHHHHHHHHHHH----HTTCTTTEEEEC--SCGGGSHHHH
T ss_pred CCEEEEecCCCcHHHHH----HHHHC---CCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEEE--CCHHHHHHhc
Confidence 34899999998853333 33321 24689999999888877766554 34553 44442 1222210100
Q ss_pred cccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 225 LNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
..-..=+.++++... .....+|.. .+.|+|.-+++++
T Consensus 122 ~~~~~fD~I~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 122 ELYPLFDVLFIDAAK-------GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp TTSCCEEEEEEEGGG-------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccCCCccEEEECCCH-------HHHHHHHHHHHHHcCCCeEEEEE
Confidence 000111344443321 123455544 5779999777765
No 166
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=41.20 E-value=26 Score=33.50 Aligned_cols=112 Identities=21% Similarity=0.247 Sum_probs=61.4
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEec
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPV 213 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v 213 (416)
+.|++.+.-.+.-+|+|+|.+.|. +...|+.+. |.+++|+++. ...++.+.+++. ..|++ ++|..-
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~~~~~ 240 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEM-AGTVDTARSYLK----DEGLSDRVDVVEG 240 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-TTHHHHHHHHHH----HTTCTTTEEEEEC
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecC-HHHHHHHHHHHH----hcCCCCceEEEeC
Confidence 456666655566799999999885 334444432 5689999997 556666655543 34553 566542
Q ss_pred cccccc-cCccccccCCCceEEEe-eecccccccCCCchHHHHHH-HhcCCcE-EEEeccC
Q 014896 214 AEKVGN-LDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCLL-QRLAPKV-VTVVEQD 270 (416)
Q Consensus 214 ~~~~e~-l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~i-r~L~P~v-vtlvE~e 270 (416)
++.+ +. ..-++++.+ .+||. .+ .....+|..+ +.|+|.- ++++|..
T Consensus 241 --d~~~~~~------~~~D~v~~~~vl~~~-~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 241 --DFFEPLP------RKADAIILSFVLLNW-PD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp --CTTSCCS------SCEEEEEEESCGGGS-CH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --CCCCCCC------CCccEEEEcccccCC-CH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 2211 11 011333333 34442 11 0113456554 6689985 4556654
No 167
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=40.64 E-value=48 Score=30.98 Aligned_cols=53 Identities=9% Similarity=0.050 Sum_probs=36.0
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
+.|++.+.-...-+|+|+|.|.|.--..|.+. + -++|||+.+...++.+.+++
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-----~----~~v~~vD~~~~~~~~a~~~~ 70 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-----A----KKVVACELDPRLVAELHKRV 70 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-----S----SEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-----C----CEEEEEECCHHHHHHHHHHH
Confidence 34555554445568999999999755555443 1 18999999987776665554
No 168
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=40.52 E-value=25 Score=33.63 Aligned_cols=39 Identities=15% Similarity=0.184 Sum_probs=27.1
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALE 191 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~ 191 (416)
.+.-+|+|+|.|.|. +...|+.+. |.+++|+++. ...++
T Consensus 187 ~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~ 225 (352)
T 1fp2_A 187 DGLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR-PQVVE 225 (352)
T ss_dssp TTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHT
T ss_pred ccCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC-HHHHh
Confidence 345699999999884 455555442 4578999998 54443
No 169
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=39.56 E-value=34 Score=30.48 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=36.8
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
..+++.+.-...-.|+|+|.|.|..-..|.+... .++|+|+.+...++.+.+++.
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--------~~v~~vD~~~~~~~~a~~~~~ 135 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--------TDVYTIERIPELVEFAKRNLE 135 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--------SCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--------CEEEEEeCCHHHHHHHHHHHH
Confidence 3455555544455799999998865444444331 479999998887777766654
No 170
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=39.02 E-value=17 Score=34.93 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=64.5
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEec
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPV 213 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v 213 (416)
..+.|++.+.....-+|+|+|.|.|.- ...|+.+. |..++|+|+.+...++.+.+++. ..|+..+|.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~----~~~la~~~---~~~~v~~vD~s~~~l~~a~~~~~----~~~~~~~~~-- 250 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVL----SVAFARHS---PKIRLTLCDVSAPAVEASRATLA----ANGVEGEVF-- 250 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHH----HHHHHHHC---TTCBCEEEESBHHHHHHHHHHHH----HTTCCCEEE--
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHH----HHHHHHHC---CCCEEEEEECCHHHHHHHHHHHH----HhCCCCEEE--
Confidence 467788888543334799999998863 33344331 45689999999888887776654 356665553
Q ss_pred cccccccCccccccCCCceEEEeeeccc-ccccCCCchHHHHH-HHhcCCcEEEEe
Q 014896 214 AEKVGNLDPERLNISKREAVAVHWLQHS-LYDVTGSDTNTLCL-LQRLAPKVVTVV 267 (416)
Q Consensus 214 ~~~~e~l~~~~l~~~~~EalaVn~l~h~-l~~~~~~~~~~L~~-ir~L~P~vvtlv 267 (416)
.....+.. -..=++++.|...|. ..........++.. .+.|+|.-.+++
T Consensus 251 ~~d~~~~~-----~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 251 ASNVFSEV-----KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp ECSTTTTC-----CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred Eccccccc-----cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 22221111 112245555654332 11011122345544 467899865443
No 171
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=38.86 E-value=34 Score=30.26 Aligned_cols=55 Identities=11% Similarity=0.150 Sum_probs=37.0
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEE
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFC 211 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~ 211 (416)
+.-.|+|+|.|.|.- +..||.+. |..++|||+.+...++.+.+++ +..|++ ++|.
T Consensus 38 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~giD~s~~~l~~a~~~~----~~~~~~nv~~~ 93 (213)
T 2fca_A 38 DNPIHIEVGTGKGQF----ISGMAKQN---PDINYIGIELFKSVIVTAVQKV----KDSEAQNVKLL 93 (213)
T ss_dssp CCCEEEEECCTTSHH----HHHHHHHC---TTSEEEEECSCHHHHHHHHHHH----HHSCCSSEEEE
T ss_pred CCceEEEEecCCCHH----HHHHHHHC---CCCCEEEEEechHHHHHHHHHH----HHcCCCCEEEE
Confidence 345699999998853 33444442 4578999999988887776654 345653 5554
No 172
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=38.37 E-value=40 Score=29.63 Aligned_cols=52 Identities=8% Similarity=0.088 Sum_probs=34.7
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
.|++.+.-...-+|+|+|.|.|.--.. |+.+. -++|||+.+...++.+.+++
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~-----~~v~~vD~~~~~~~~a~~~~ 112 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTAL----IAEIV-----DKVVSVEINEKMYNYASKLL 112 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHH----HHHHS-----SEEEEEESCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHHc-----CEEEEEeCCHHHHHHHHHHH
Confidence 455555444556899999998863333 33331 48999999988777766554
No 173
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=37.65 E-value=46 Score=29.74 Aligned_cols=100 Identities=14% Similarity=0.085 Sum_probs=53.9
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCcc-c
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPE-R 224 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~-~ 224 (416)
.-+|+|+|.|.|.-=..| +.+ .|..++|||+.+...++.+.++ ++..|++ ++|.. .+++++... .
T Consensus 71 ~~~vLDiG~G~G~~~~~l----a~~---~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~v~~~~--~d~~~~~~~~~ 137 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPI----KIC---FPHLHVTIVDSLNKRITFLEKL----SEALQLENTTFCH--DRAETFGQRKD 137 (240)
T ss_dssp CCEEEEECSSSCTTHHHH----HHH---CTTCEEEEEESCHHHHHHHHHH----HHHHTCSSEEEEE--SCHHHHTTCTT
T ss_pred CCEEEEecCCCCHHHHHH----HHh---CCCCEEEEEeCCHHHHHHHHHH----HHHcCCCCEEEEe--ccHHHhccccc
Confidence 358999999988632222 221 1346899999998877766554 3445664 55442 333333211 0
Q ss_pred cccCCCceEEEeeecccccccCCCchHHHHHH-HhcCCcEEEEec
Q 014896 225 LNISKREAVAVHWLQHSLYDVTGSDTNTLCLL-QRLAPKVVTVVE 268 (416)
Q Consensus 225 l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~i-r~L~P~vvtlvE 268 (416)
. -..=+.++.+. ......++..+ +-|+|.-.+++.
T Consensus 138 ~-~~~fD~V~~~~--------~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 138 V-RESYDIVTARA--------VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp T-TTCEEEEEEEC--------CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred c-cCCccEEEEec--------cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 0 00112333222 12345666665 778998665543
No 174
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=37.54 E-value=26 Score=31.35 Aligned_cols=103 Identities=7% Similarity=0.046 Sum_probs=56.2
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEEeccccccccCcc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFCPVAEKVGNLDPE 223 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~~v~~~~e~l~~~ 223 (416)
+.-.|+|+|.+.|.-- ..|+.. .|..++|+|+.+...++.+.+++ +..|++ .+|.. ....+..++
T Consensus 71 ~~~~vLDiG~G~G~~~----~~la~~---~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~~--~d~~~~~~~ 137 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSS----MQFASI---SDDIHVTTIERNETMIQYAKQNL----ATYHFENQVRIIE--GNALEQFEN 137 (232)
T ss_dssp TCCEEEEECCSSSHHH----HHHHTT---CTTCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEEE--SCGGGCHHH
T ss_pred CCCEEEEEeCchhHHH----HHHHHh---CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEEE--CCHHHHHHh
Confidence 4458999999988532 234432 13578999999988887776654 345653 55543 122221110
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEecc
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQ 269 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ 269 (416)
.+ -..=+.+.++. .......++.. .+.|+|.-+++++.
T Consensus 138 ~~-~~~fD~V~~~~-------~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 138 VN-DKVYDMIFIDA-------AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp HT-TSCEEEEEEET-------TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hc-cCCccEEEEcC-------cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 00 01113333331 11223445554 47799998887753
No 175
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=37.40 E-value=21 Score=32.94 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=36.4
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGK 195 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~ 195 (416)
..|++++.-...-+|+|+|.|.|. |...|+.++ .-++|||+.+...++.+.+
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~~~~~~~~~ 72 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDREMVENLKS 72 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCHHHHHHHTT
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCHHHHHHHHh
Confidence 345555554556689999998765 677888772 3589999998876655443
No 176
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=37.35 E-value=50 Score=30.20 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=38.2
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSD 199 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~ 199 (416)
..|++.+.-...-.|+|+|.+.|.- ...|+.+-+ |..++|+++.+.+.++.+.+++..
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~----~~~la~~~~--~~~~v~~vD~s~~~~~~a~~~~~~ 159 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAM----CAVLARAVG--SSGKVFAYEKREEFAKLAESNLTK 159 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHTT--TTCEEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHHHHHHHH
Confidence 3566666545556899999998853 333443311 345899999998888777665543
No 177
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=36.97 E-value=28 Score=30.52 Aligned_cols=56 Identities=18% Similarity=0.189 Sum_probs=36.4
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
+.-+|+|+|.+.|.-- ..|+.+. |+.-++|+|+.+...++.+.+++ +..|++ .+|.
T Consensus 58 ~~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~ 115 (223)
T 3duw_A 58 GARNILEIGTLGGYST----IWLARGL--SSGGRVVTLEASEKHADIARSNI----ERANLNDRVEVR 115 (223)
T ss_dssp TCSEEEEECCTTSHHH----HHHHTTC--CSSCEEEEEESCHHHHHHHHHHH----HHTTCTTTEEEE
T ss_pred CCCEEEEecCCccHHH----HHHHHhC--CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE
Confidence 3457999999888432 2344442 33569999999988777766654 345663 5554
No 178
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=36.67 E-value=47 Score=29.79 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=36.3
Q ss_pred CCCCeEEEeecCCCH----HHHHHHHHHHHHHHHHcCCCeEEEecccc
Q 014896 173 GGPPYVRLTGLGTSM----EALEATGKRLSDFAEKLGLPFEFCPVAEK 216 (416)
Q Consensus 173 ggpP~LRITgI~~~~----~~l~~tg~rL~~~A~~lgvpFeF~~v~~~ 216 (416)
-|||..|||...++. ..|+++-+.+.+..+..|..|.|+--...
T Consensus 132 vgaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r~~~~ 179 (188)
T 1yz7_A 132 LGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRKEKR 179 (188)
T ss_dssp CSTTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCCC
T ss_pred EcCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEcHHH
Confidence 478999988888763 46899999999999999999999865433
No 179
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=36.46 E-value=31 Score=30.56 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=31.1
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECCHHHHHHHHHh
Confidence 3579999999886 55566665 2 3899999998877776655
No 180
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=36.42 E-value=53 Score=30.11 Aligned_cols=42 Identities=12% Similarity=0.089 Sum_probs=31.0
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGK 195 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~ 195 (416)
...-.|+|+|.|.|. +...||.+ | .++|||+.+...++.+.+
T Consensus 67 ~~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~S~~~i~~a~~ 108 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEISEIGIREFFA 108 (252)
T ss_dssp CCSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEECCHHHHHHHHH
Confidence 355689999999885 34556765 3 389999999888876543
No 181
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=36.27 E-value=98 Score=26.48 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=31.3
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
+++.+.. ..-.|+|+|.+.|. +...| +. -++|||+.+...++.+.+++
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCCHHHHHHHHHHC
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCCHHHHHHHHHhC
Confidence 4444433 45589999999884 33333 11 28999999988777666554
No 182
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=35.97 E-value=40 Score=30.46 Aligned_cols=45 Identities=24% Similarity=0.358 Sum_probs=30.3
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
...-+|+|+|.|.|.--..|.+.+ |..++|||+.+...++.+.++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~~~~~a~~~ 128 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-------PEITTFGLDVSKVAIKAAAKR 128 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-------TTSEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-------CCCeEEEEeCCHHHHHHHHHh
Confidence 345689999999886544443332 224899999998777665443
No 183
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=35.74 E-value=42 Score=28.06 Aligned_cols=52 Identities=15% Similarity=0.191 Sum_probs=34.5
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
..+++.+-. ..-+|+|+|.+.|. +...|+.+ + .++|+|+.+...++.+.+++
T Consensus 37 ~~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~~~~~~~a~~~~ 88 (195)
T 3cgg_A 37 ARLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLDPILIDYAKQDF 88 (195)
T ss_dssp HHHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCCHHHHHHHHHhC
Confidence 345555532 44589999998875 34455544 2 38999999987777666544
No 184
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=34.83 E-value=44 Score=29.16 Aligned_cols=103 Identities=17% Similarity=0.064 Sum_probs=55.3
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC---CeEEEeccccccccCccc
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL---PFEFCPVAEKVGNLDPER 224 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv---pFeF~~v~~~~e~l~~~~ 224 (416)
-.|+|+|.|.|.-= ..++.+ + . -++|||+.+.+.++.+.+++. ..|+ ..+|.. .+..++.+.
T Consensus 55 ~~vLDlGcGtG~~~----~~~~~~-~-~--~~v~gvD~s~~~l~~a~~~~~----~~~~~~~~v~~~~--~d~~~~~~~- 119 (201)
T 2ift_A 55 SECLDGFAGSGSLG----FEALSR-Q-A--KKVTFLELDKTVANQLKKNLQ----TLKCSSEQAEVIN--QSSLDFLKQ- 119 (201)
T ss_dssp CEEEETTCTTCHHH----HHHHHT-T-C--SEEEEECSCHHHHHHHHHHHH----HTTCCTTTEEEEC--SCHHHHTTS-
T ss_pred CeEEEcCCccCHHH----HHHHHc-c-C--CEEEEEECCHHHHHHHHHHHH----HhCCCccceEEEE--CCHHHHHHh-
Confidence 47999999988522 222333 1 1 389999999988887776653 4565 355442 222221110
Q ss_pred cccCC-CceEEEeeecccccccCCCchHHHHHHHh---cCCcEEEEeccC
Q 014896 225 LNISK-REAVAVHWLQHSLYDVTGSDTNTLCLLQR---LAPKVVTVVEQD 270 (416)
Q Consensus 225 l~~~~-~EalaVn~l~h~l~~~~~~~~~~L~~ir~---L~P~vvtlvE~e 270 (416)
+.-.. =++++.|...| .+....++..+.+ |+|.-+++++..
T Consensus 120 ~~~~~~fD~I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 120 PQNQPHFDVVFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp CCSSCCEEEEEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred hccCCCCCEEEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 00011 13444443322 1234466777654 999866655543
No 185
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=34.62 E-value=58 Score=28.85 Aligned_cols=55 Identities=4% Similarity=-0.086 Sum_probs=35.9
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFC 211 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~ 211 (416)
...-+|+|+|.|.|. +...|+.+. +. ++|||+.+...++.+.++ ++..+...+|.
T Consensus 59 ~~~~~vLDiGcGtG~----~~~~l~~~~---~~-~v~gvD~s~~~l~~a~~~----~~~~~~~v~~~ 113 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECNDGVFQRLRDW----APRQTHKVIPL 113 (236)
T ss_dssp TTCEEEEEECCTTSH----HHHHHHTSC---EE-EEEEEECCHHHHHHHHHH----GGGCSSEEEEE
T ss_pred CCCCeEEEEeccCCH----HHHHHHhcC---CC-eEEEEcCCHHHHHHHHHH----HHhcCCCeEEE
Confidence 345689999999884 344455432 22 899999998877776653 33445444444
No 186
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=34.38 E-value=44 Score=30.61 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=37.5
Q ss_pred hHHHHHhhh-cCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 135 NQAIQEAFE-REDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 135 NqaILeA~~-g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
...+|.++. -...-+|+|+|.|.|.- ...|+.+. |..+||||+.+...++.+.+++.
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~----~l~la~~~---~~~~v~gvDi~~~~~~~a~~n~~ 81 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAA----GMAVAARL---EKAEVTLYERSQEMAEFARRSLE 81 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHH----HHHHHHHC---TTEEEEEEESSHHHHHHHHHHTT
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHH----HHHHHHhC---CCCeEEEEECCHHHHHHHHHHHH
Confidence 333444443 34456899999998853 33444442 45899999999888877776653
No 187
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=34.04 E-value=92 Score=29.55 Aligned_cols=53 Identities=9% Similarity=0.052 Sum_probs=36.2
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.|++++.-...-+|+|+|.|.|..-..| +.+ + -++|+|+.+.+.++.+.+++.
T Consensus 41 ~Iv~~l~~~~~~~VLEIG~G~G~lT~~L----a~~-~----~~V~aVEid~~li~~a~~~~~ 93 (295)
T 3gru_A 41 KAVESANLTKDDVVLEIGLGKGILTEEL----AKN-A----KKVYVIEIDKSLEPYANKLKE 93 (295)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHH----HHH-S----SEEEEEESCGGGHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCchHHHHHH----Hhc-C----CEEEEEECCHHHHHHHHHHhc
Confidence 4555555455668999999988644444 433 1 379999998877777666654
No 188
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=33.77 E-value=58 Score=31.25 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=55.6
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC-CeEEEeccccccccCcc
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL-PFEFCPVAEKVGNLDPE 223 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv-pFeF~~v~~~~e~l~~~ 223 (416)
...=+|+|+|.|.|. ...++ +|..++ -++|||+.+.+.++.+.+++.+ .|+ .++|.. ....++.
T Consensus 121 ~~g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis~~~l~~Ar~~~~~----~gl~~v~~v~--gDa~~l~-- 185 (298)
T 3fpf_A 121 RRGERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIEPDIAELSRKVIEG----LGVDGVNVIT--GDETVID-- 185 (298)
T ss_dssp CTTCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESSHHHHHHHHHHHHH----HTCCSEEEEE--SCGGGGG--
T ss_pred CCcCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECCHHHHHHHHHHHHh----cCCCCeEEEE--CchhhCC--
Confidence 445588999988763 33332 344443 4899999999988888776544 344 355542 2222221
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEec
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE 268 (416)
-.+=+++.+..+ ......++.. .+.|+|.-.+++.
T Consensus 186 ---d~~FDvV~~~a~-------~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 186 ---GLEFDVLMVAAL-------AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp ---GCCCSEEEECTT-------CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---CCCcCEEEECCC-------ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 012234443321 1234456655 5779998666554
No 189
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=33.40 E-value=38 Score=30.84 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=35.2
Q ss_pred HHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 136 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 136 qaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
+.|++.+.-...-+|+|+|.|.|. +...|+.+. -++|||+.+.+.++.+.+++
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~-----~~v~~vD~~~~~~~~a~~~~ 72 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC-----NFVTAIEIDHKLCKTTENKL 72 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEECSCHHHHHHHHHHT
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC-----CeEEEEECCHHHHHHHHHhh
Confidence 334444443445689999999886 344455442 47999999988776666554
No 190
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=33.20 E-value=30 Score=31.44 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=37.4
Q ss_pred CCccchhHHHHhHHHHHhhhc-CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHH
Q 014896 124 SPFVKFSHFTANQAIQEAFER-EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEA 192 (416)
Q Consensus 124 ~P~~kfa~~taNqaILeA~~g-~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~ 192 (416)
.||+.=+.+--- .+|+.+.- .+.-.|+|+|.|.|. +...|+.+ |+ -++|||+.+...++.
T Consensus 15 ~~yvsrg~~kL~-~~L~~~~~~~~g~~VLDiGcGtG~----~t~~la~~--g~--~~V~gvDis~~ml~~ 75 (232)
T 3opn_A 15 LRYVSRGGLKLE-KALKEFHLEINGKTCLDIGSSTGG----FTDVMLQN--GA--KLVYALDVGTNQLAW 75 (232)
T ss_dssp CCSSSTTHHHHH-HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHT--TC--SEEEEECSSCCCCCH
T ss_pred CCccCCcHHHHH-HHHHHcCCCCCCCEEEEEccCCCH----HHHHHHhc--CC--CEEEEEcCCHHHHHH
Confidence 467766655433 33444432 334579999999885 45555655 22 289999988665543
No 191
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=32.81 E-value=1.5e+02 Score=28.60 Aligned_cols=62 Identities=18% Similarity=0.131 Sum_probs=39.5
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC--CeEEE
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL--PFEFC 211 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv--pFeF~ 211 (416)
+++.. -...-.|+|.|.|.|. +.-.++.+. +.-+|+|++.+...++.+.+++. ..|+ ..+|.
T Consensus 210 l~~~~-~~~~~~vLD~gCGsG~----~~i~~a~~~---~~~~v~g~Dis~~~l~~A~~n~~----~~gl~~~i~~~ 273 (373)
T 3tm4_A 210 MIELA-ELDGGSVLDPMCGSGT----ILIELALRR---YSGEIIGIEKYRKHLIGAEMNAL----AAGVLDKIKFI 273 (373)
T ss_dssp HHHHH-TCCSCCEEETTCTTCH----HHHHHHHTT---CCSCEEEEESCHHHHHHHHHHHH----HTTCGGGCEEE
T ss_pred HHHhh-cCCCCEEEEccCcCcH----HHHHHHHhC---CCCeEEEEeCCHHHHHHHHHHHH----HcCCCCceEEE
Confidence 34433 3445579999999885 334444442 12379999999988888777653 4566 34554
No 192
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=32.53 E-value=67 Score=28.34 Aligned_cols=54 Identities=17% Similarity=0.122 Sum_probs=37.1
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC--CeEEEe
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL--PFEFCP 212 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv--pFeF~~ 212 (416)
..-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.+++ +..|+ ..+|..
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDIDPVKIALARNNA----EVYGIADKIEFIC 133 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHH----HHTTCGGGEEEEE
T ss_pred CCCEEEECccccCH----HHHHHHHc--C---CEEEEEECCHHHHHHHHHHH----HHcCCCcCeEEEE
Confidence 45689999999884 33444544 2 68999999988887776654 44566 355543
No 193
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=32.31 E-value=1.1e+02 Score=26.93 Aligned_cols=42 Identities=12% Similarity=0.074 Sum_probs=26.9
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEAT 193 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~t 193 (416)
..-+|+|+|.+.|.- ...|+.+.+ |.-+++||+.+...+++.
T Consensus 77 ~~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~s~~~i~~~ 118 (233)
T 2ipx_A 77 PGAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEFSHRSGRDL 118 (233)
T ss_dssp TTCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECCCHHHHHHH
T ss_pred CCCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHH
Confidence 345899999998853 333443321 334899999987655443
No 194
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=32.24 E-value=80 Score=31.37 Aligned_cols=54 Identities=13% Similarity=0.094 Sum_probs=36.8
Q ss_pred eeEEeeccccCc----cccHHHHHHHhcCCCC------CCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQG----LQWPGLFHILASRPGG------PPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 147 ~VHIIDf~i~~G----~QWp~LiqaLa~R~gg------pP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
.+.|.|||.+.| .-+..+|+++..+... +|.+.+..-+.|.-.....-+.|-.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~ 116 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSF 116 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhh
Confidence 799999999999 5667788888877532 68899999988754343333344333
No 195
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=32.14 E-value=2.9e+02 Score=25.16 Aligned_cols=93 Identities=11% Similarity=-0.026 Sum_probs=51.2
Q ss_pred EEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEEEeccccccccCcccccc
Q 014896 149 HIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEFCPVAEKVGNLDPERLNI 227 (416)
Q Consensus 149 HIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF~~v~~~~e~l~~~~l~~ 227 (416)
.|+|+|.+.|.--..+ |.+. +.-++|||+.+.+.++.+.+++ +..|++ .+|. .....++ +. .
T Consensus 122 ~VLDlgcG~G~~s~~l----a~~~---~~~~V~~vD~s~~av~~a~~n~----~~n~l~~~~~~--~~d~~~~-~~---~ 184 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPL----AKYS---KPKLVYAIEKNPTAYHYLCENI----KLNKLNNVIPI--LADNRDV-EL---K 184 (272)
T ss_dssp EEEETTCTTTTTHHHH----HHHT---CCSEEEEEECCHHHHHHHHHHH----HHTTCSSEEEE--ESCGGGC-CC---T
T ss_pred EEEEecCcCCHHHHHH----HHhC---CCCEEEEEeCCHHHHHHHHHHH----HHcCCCCEEEE--ECChHHc-Cc---c
Confidence 6899999988643333 3331 1358999999988887766554 445663 4433 3333333 21 0
Q ss_pred CCCceEEEeeecccccccCCCchHHH-HHHHhcCCcEEEE
Q 014896 228 SKREAVAVHWLQHSLYDVTGSDTNTL-CLLQRLAPKVVTV 266 (416)
Q Consensus 228 ~~~EalaVn~l~h~l~~~~~~~~~~L-~~ir~L~P~vvtl 266 (416)
..=+++++|.. .....++ ..++.|+|.-+++
T Consensus 185 ~~~D~Vi~d~p--------~~~~~~l~~~~~~LkpgG~l~ 216 (272)
T 3a27_A 185 DVADRVIMGYV--------HKTHKFLDKTFEFLKDRGVIH 216 (272)
T ss_dssp TCEEEEEECCC--------SSGGGGHHHHHHHEEEEEEEE
T ss_pred CCceEEEECCc--------ccHHHHHHHHHHHcCCCCEEE
Confidence 11134444421 1223344 4467899975544
No 196
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=31.92 E-value=71 Score=28.19 Aligned_cols=40 Identities=13% Similarity=0.024 Sum_probs=26.2
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEAT 193 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~t 193 (416)
.-.|+|+|.|.|. +...+ +.+-+ .-++|||+.+...+++.
T Consensus 58 g~~VLDlGcGtG~-~~~~l---a~~~~---~~~V~gvD~s~~~l~~~ 97 (210)
T 1nt2_A 58 DERVLYLGAASGT-TVSHL---ADIVD---EGIIYAVEYSAKPFEKL 97 (210)
T ss_dssp SCEEEEETCTTSH-HHHHH---HHHTT---TSEEEEECCCHHHHHHH
T ss_pred CCEEEEECCcCCH-HHHHH---HHHcC---CCEEEEEECCHHHHHHH
Confidence 3479999999997 33333 33221 23899999998765443
No 197
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=31.40 E-value=64 Score=30.32 Aligned_cols=55 Identities=18% Similarity=0.174 Sum_probs=38.1
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.|++++.-...-+|+|+|.|.|.-=..|.+.... ...++|||+.+.+.++.+.++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~-----~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLAT-----PGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCB-----TTBCEEEEECCHHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCC-----cCCeEEEEECCHHHHHHHHHh
Confidence 4666665556668999999999865555544321 135699999998877776665
No 198
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=31.23 E-value=91 Score=29.45 Aligned_cols=67 Identities=15% Similarity=0.119 Sum_probs=43.4
Q ss_pred HhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC-eEE
Q 014896 134 ANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP-FEF 210 (416)
Q Consensus 134 aNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp-FeF 210 (416)
+.+.+.+.+.-...-+|+|+|.+.|.-=..|.+.+ ++.-+||+++.+...++.+.+++. ..|++ .+|
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s~~~l~~a~~~~~----~~g~~~v~~ 173 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVDENRLRETRLNLS----RLGVLNVIL 173 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSCHHHHHHHHHHHH----HHTCCSEEE
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCCHHHHHHHHHHHH----HhCCCeEEE
Confidence 44455555554555589999999886444444433 234589999999888877766654 45663 444
No 199
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=31.18 E-value=70 Score=28.28 Aligned_cols=117 Identities=13% Similarity=0.120 Sum_probs=61.4
Q ss_pred HhHHHHHhhhcC-----CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCe
Q 014896 134 ANQAIQEAFERE-----DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPF 208 (416)
Q Consensus 134 aNqaILeA~~g~-----~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpF 208 (416)
....+++.+... +.-.|+|+|.|.|. +...|+.+. ..++|||+.+...++.+.+++...- +...
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~ 130 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITEDFLVQAKTYLGEEG---KRVR 130 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHHHHHHHHHHTGGGG---GGEE
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHHHHHHHHHHhhhcC---CceE
Confidence 344555555332 36689999998885 444555553 2489999999888877766553321 1223
Q ss_pred EEEeccccccccCccccccCCCceEEEe-eecccccccCCCchHHHHH-HHhcCCcEEE-Eecc
Q 014896 209 EFCPVAEKVGNLDPERLNISKREAVAVH-WLQHSLYDVTGSDTNTLCL-LQRLAPKVVT-VVEQ 269 (416)
Q Consensus 209 eF~~v~~~~e~l~~~~l~~~~~EalaVn-~l~h~l~~~~~~~~~~L~~-ir~L~P~vvt-lvE~ 269 (416)
+|.. ..+.++... -..=++++.+ .++|+. + .....+|.. .+.|+|.-++ +.+.
T Consensus 131 ~~~~--~d~~~~~~~---~~~fD~v~~~~~l~~~~-~--~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 131 NYFC--CGLQDFTPE---PDSYDVIWIQWVIGHLT-D--QHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp EEEE--CCGGGCCCC---SSCEEEEEEESCGGGSC-H--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEE--cChhhcCCC---CCCEEEEEEcchhhhCC-H--HHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 4432 223333211 0111344444 345531 1 012345554 4679998554 4444
No 200
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=29.37 E-value=83 Score=29.74 Aligned_cols=137 Identities=9% Similarity=0.025 Sum_probs=71.7
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHc-CCCeEEEeccccccc-cCcc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKL-GLPFEFCPVAEKVGN-LDPE 223 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~l-gvpFeF~~v~~~~e~-l~~~ 223 (416)
+.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++...+..+ +-.+++.. ....+ +..
T Consensus 95 ~~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~--~Da~~~l~~- 164 (304)
T 2o07_A 95 NPRKVLIIGGGDGG----VLREVVKH---PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV--GDGFEFMKQ- 164 (304)
T ss_dssp SCCEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHHHT-
T ss_pred CCCEEEEECCCchH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHHHhh-
Confidence 34589999998874 55566655 256799999999988888888776654433 22344442 11111 110
Q ss_pred ccccCCCceEEEeeecccccccCCCchHHHHH-HHhcCCcEEEEeccCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014896 224 RLNISKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKVVTVVEQDLSPAGSFLGRFVEAIHYYSALFDSLG 296 (416)
Q Consensus 224 ~l~~~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~vvtlvE~ea~~~~~F~~RF~eaL~yYsalFDsLd 296 (416)
.-..=++++++...+...........++.. .+.|+|.-+++++....... .+.+.+...+...+|....
T Consensus 165 --~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--~~~~~~~~~~l~~~f~~v~ 234 (304)
T 2o07_A 165 --NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--LDLIKEMRQFCQSLFPVVA 234 (304)
T ss_dssp --CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--HHHHHHHHHHHHHHCSEEE
T ss_pred --CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--hHHHHHHHHHHHHhCCCce
Confidence 001225666665322111000112345554 47799998877765332111 2333444445556665443
No 201
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=29.20 E-value=61 Score=28.82 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=31.0
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.-.|+|+|.+.|.-=..|.+.+ |+.-++|+|+.+...++.+.+++.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~~~~~a~~~~~ 106 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASAL------PEDGKILCCDVSEEWTNVARKYWK 106 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHS------CTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHHH
Confidence 3479999998775433333332 234589999999888877766654
No 202
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=28.62 E-value=1.2e+02 Score=27.36 Aligned_cols=55 Identities=13% Similarity=0.222 Sum_probs=35.4
Q ss_pred eeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 147 RVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 147 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+...++.+.+++. ..|+. .+|.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~s~~~~~~a~~~~~----~~g~~~~i~~~ 136 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAI------PEDGKILAMDINKENYELGLPVIK----KAGVDHKIDFR 136 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHS------CTTCEEEEEESCCHHHHHHHHHHH----HTTCGGGEEEE
T ss_pred cCEEEEeCCCcCHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHHH----HcCCCCCeEEE
Confidence 3489999998886433344433 234689999998877766665543 45663 4444
No 203
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=27.77 E-value=42 Score=29.15 Aligned_cols=45 Identities=11% Similarity=0.006 Sum_probs=31.2
Q ss_pred eEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 148 VHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 148 VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
-+|+|+|.+.|.- ...|+.+. |+.-++|+|+.+...++.+.+++.
T Consensus 58 ~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~~~~~~~~a~~~~~ 102 (210)
T 3c3p_A 58 QLVVVPGDGLGCA----SWWFARAI--SISSRVVMIDPDRDNVEHARRMLH 102 (210)
T ss_dssp SEEEEESCGGGHH----HHHHHTTS--CTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEEcCCccHH----HHHHHHhC--CCCCEEEEEECCHHHHHHHHHHHH
Confidence 3799999988852 23344432 224689999999888877766654
No 204
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=27.70 E-value=1.5e+02 Score=29.12 Aligned_cols=63 Identities=19% Similarity=0.328 Sum_probs=40.6
Q ss_pred CeeEE-eeccc--------------cCcc---ccHHHHHHHhcCCCCCCeEEEeecCC-------CHHHHHHHHHHHHHH
Q 014896 146 DRVHI-IDLDI--------------MQGL---QWPGLFHILASRPGGPPYVRLTGLGT-------SMEALEATGKRLSDF 200 (416)
Q Consensus 146 ~~VHI-IDf~i--------------~~G~---QWp~LiqaLa~R~ggpP~LRITgI~~-------~~~~l~~tg~rL~~~ 200 (416)
-+||| ||-|+ .+|+ |+..+++.+... |.|+|.||.. +.+...++-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 47888 88886 3565 677778777654 5699999863 233444455555555
Q ss_pred HH----HcCCCeEEEe
Q 014896 201 AE----KLGLPFEFCP 212 (416)
Q Consensus 201 A~----~lgvpFeF~~ 212 (416)
++ ..|+++++.-
T Consensus 209 ~~~l~~~~g~~~~~l~ 224 (428)
T 2j66_A 209 GRNIYERYGIVCECIN 224 (428)
T ss_dssp HHHHHHHHCCCCSEEE
T ss_pred HHHHHHHhCCCCCEEE
Confidence 54 4487776653
No 205
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=27.59 E-value=97 Score=23.07 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=21.3
Q ss_pred CeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEe
Q 014896 176 PYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCP 212 (416)
Q Consensus 176 P~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~ 212 (416)
-.+||||| |...-.+....-...|+.+++...|..
T Consensus 42 leiritgv--peqvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 42 LEIRITGV--PEQVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp EEEEEESC--CHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred eEEEEecC--hHHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 47999998 433333334444455777787766653
No 206
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=27.35 E-value=2e+02 Score=25.54 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=36.3
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC--eEEE
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP--FEFC 211 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp--FeF~ 211 (416)
+.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+.+.++.+.+++. ..|+. .+|.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~~~~~~~~a~~~~~----~~g~~~~i~~~ 127 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI------PDDGKITAIDFDREAYEIGLPFIR----KAGVEHKINFI 127 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS------CTTCEEEEEESCHHHHHHHHHHHH----HTTCGGGEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEE
Confidence 33479999998886433344433 234689999999887776665543 45663 4444
No 207
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=26.97 E-value=65 Score=30.19 Aligned_cols=52 Identities=13% Similarity=0.063 Sum_probs=36.0
Q ss_pred CeeEEeeccccCccccHHHHHHHhcC-CCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASR-PGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R-~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
+.+.|.|.|.+.|.-=-+|--.|+.. +..+...+|+|++.+...|+.+.+..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 46999999999996433443444443 21222579999999999888877643
No 208
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=26.28 E-value=1e+02 Score=26.15 Aligned_cols=46 Identities=20% Similarity=0.086 Sum_probs=31.9
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
...-+|+|+|.|.|. +...|+.+ |+. ++|||+.+...++.+.+++.
T Consensus 41 ~~~~~vLdiGcG~G~----~~~~l~~~--~~~--~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 41 RPEDRILVLGCGNSA----LSYELFLG--GFP--NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp CTTCCEEEETCTTCS----HHHHHHHT--TCC--CEEEEESCHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCCcH----HHHHHHHc--CCC--cEEEEeCCHHHHHHHHHhcc
Confidence 345679999998875 33344444 332 89999999888877766654
No 209
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=26.11 E-value=1.2e+02 Score=26.40 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=35.2
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCC--CeEEE
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGL--PFEFC 211 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgv--pFeF~ 211 (416)
+.-+|+|+|.+.|. +...|+..- |+.-++|+|+.+...++.+.+++. ..|+ .++|.
T Consensus 69 ~~~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~~~~~~~a~~~~~----~~g~~~~i~~~ 126 (229)
T 2avd_A 69 QAKKALDLGTFTGY----SALALALAL--PADGRVVTCEVDAQPPELGRPLWR----QAEAEHKIDLR 126 (229)
T ss_dssp TCCEEEEECCTTSH----HHHHHHTTS--CTTCEEEEEESCSHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred CCCEEEEEcCCccH----HHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHHH----HCCCCCeEEEE
Confidence 34489999998774 233444432 234699999998877776665543 4455 34554
No 210
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=26.04 E-value=39 Score=29.95 Aligned_cols=105 Identities=15% Similarity=0.067 Sum_probs=55.2
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEEeccccccccCcc-c
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFCPVAEKVGNLDPE-R 224 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~~v~~~~e~l~~~-~ 224 (416)
..-.|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++ . .-..+|.. ..+.++... .
T Consensus 56 ~~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~~~~~a~~~~----~--~~~~~~~~--~d~~~~~~~~~ 118 (245)
T 3ggd_A 56 PELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKSALEIAAKEN----T--AANISYRL--LDGLVPEQAAQ 118 (245)
T ss_dssp TTSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHHHHHHHHHHS----C--CTTEEEEE--CCTTCHHHHHH
T ss_pred CCCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHHHHHHHHHhC----c--ccCceEEE--Ccccccccccc
Confidence 34569999999884 34445543 22 7999999988777766654 1 11344432 223332211 0
Q ss_pred ccc-CCCceEEEeeecccccccCCCchHHHHH-HHhcCCcE-EEEecc
Q 014896 225 LNI-SKREAVAVHWLQHSLYDVTGSDTNTLCL-LQRLAPKV-VTVVEQ 269 (416)
Q Consensus 225 l~~-~~~EalaVn~l~h~l~~~~~~~~~~L~~-ir~L~P~v-vtlvE~ 269 (416)
+.. ...+++..+.++|.+. ......+|.. .+.|+|.- +++++.
T Consensus 119 ~~~~~~~d~v~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 119 IHSEIGDANIYMRTGFHHIP--VEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHCSCEEEEESSSTTSC--GGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccccCccEEEEcchhhcCC--HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 100 1134555554433222 1233456654 46799975 466665
No 211
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=25.88 E-value=77 Score=32.10 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=67.9
Q ss_pred HHHHHHHHhccccCCCCChhhhHHHHHHHHHHhhhhcCCccccccCCCCCcc----cHHHHHHHHHHHHccCCccchhHH
Q 014896 57 EANKMLLEISQLSTPYGTSAQRVAAYFSEAMSARLVSSCLGIYAALPSLPQT----HTQKMVSAFQVFNGISPFVKFSHF 132 (416)
Q Consensus 57 ~A~~lL~~L~~~asp~Gd~~qRla~yF~eAL~~Rl~~~~~~~y~~~~~~~~~----~~~~~~~a~~~f~~~~P~~kfa~~ 132 (416)
.+..|..+|+.. .| --.++.|+..||..--. +-|..-. .+.- ...+++.+ -++||+ |+..
T Consensus 61 L~~~i~~~I~~~---~G--pI~fa~yM~~aLy~P~~----GYY~~~~-~~~G~~~~~~GDFiTA----PeiS~~--FGe~ 124 (432)
T 4f3n_A 61 LAASLRAEIASA---GG--WIPFSRYMERVLYAPGM----GYYSGGA-QKFGRRADDGSDFVTA----PELSPL--FAQT 124 (432)
T ss_dssp HHHHHHHHHHHT---TS--CEEHHHHHHHHHHSTTT----SSSCC--------------CCSSC----GGGHHH--HHHH
T ss_pred HHHHHHHHHHHh---CC--CeeHHHHHHHHhcCCCC----CcccCCC-CCCCCCCCCCCCccCc----hhhhHH--HHHH
Confidence 445555566533 22 24688899999887533 3443210 0000 11111111 123444 4777
Q ss_pred HHhHHHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHH
Q 014896 133 TANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDF 200 (416)
Q Consensus 133 taNqaILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~ 200 (416)
.+++ |++..+....++||++|-|.|.==..+|+.|..... .| .+++-|..+..--+.-.++|...
T Consensus 125 la~~-~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~-~~-~~y~iVE~Sp~Lr~~Q~~~L~~~ 189 (432)
T 4f3n_A 125 LARP-VAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGV-EL-DEYAIVDLSGELRARQRETLGAQ 189 (432)
T ss_dssp HHHH-HHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTC-CC-SEEEEECTTSSSHHHHHHHHHHH
T ss_pred HHHH-HHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCC-CC-ceEEEEEcCHHHHHHHHHHHhcc
Confidence 7877 555555333799999999999888888888876421 22 26666766543222233556554
No 212
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=25.48 E-value=68 Score=28.75 Aligned_cols=54 Identities=6% Similarity=-0.032 Sum_probs=35.0
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPFEFC 211 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpFeF~ 211 (416)
..-+|+|+|.|.|. ....++++. | =++|||+.+.+.++.+. +.++..+....|.
T Consensus 60 ~G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~~~~~~~a~----~~~~~~~~~~~~~ 113 (236)
T 3orh_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECNDGVFQRLR----DWAPRQTHKVIPL 113 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECCHHHHHHHH----HHGGGCSSEEEEE
T ss_pred CCCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCCHHHHHHHH----HHHhhCCCceEEE
Confidence 34579999998883 334555542 3 27899999877665544 4456666665554
No 213
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=24.92 E-value=2.4e+02 Score=26.53 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=38.7
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
....+|+|.|.|.|.--..+.+.+.... .+..+++|++.+...++.+..++.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~--~~~~~v~GiDi~~~~~~~a~~n~~ 180 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKG--DVDVHASGVDVDDLLISLALVGAD 180 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTS--SCEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhc--CCCceEEEEECCHHHHHHHHHHHH
Confidence 4678999999999977666766664321 235899999999887777766554
No 214
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=24.58 E-value=82 Score=30.39 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=32.3
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHH
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRL 197 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL 197 (416)
+..+|+|+|.|.| .+...|+++. |..+||+|+.+...++.+.+++
T Consensus 89 ~~~rVLdIG~G~G----~la~~la~~~---p~~~v~~VEidp~vi~~Ar~~~ 133 (317)
T 3gjy_A 89 SKLRITHLGGGAC----TMARYFADVY---PQSRNTVVELDAELARLSREWF 133 (317)
T ss_dssp GGCEEEEESCGGG----HHHHHHHHHS---TTCEEEEEESCHHHHHHHHHHS
T ss_pred CCCEEEEEECCcC----HHHHHHHHHC---CCcEEEEEECCHHHHHHHHHhc
Confidence 4679999999988 5566666532 3458999999887666655543
No 215
>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B 3v11_B*
Probab=23.87 E-value=79 Score=29.68 Aligned_cols=39 Identities=23% Similarity=0.278 Sum_probs=32.4
Q ss_pred CCCCeEEEeecCCCH----HHHHHHHHHHHHHHHHcCCCeEEE
Q 014896 173 GGPPYVRLTGLGTSM----EALEATGKRLSDFAEKLGLPFEFC 211 (416)
Q Consensus 173 ggpP~LRITgI~~~~----~~l~~tg~rL~~~A~~lgvpFeF~ 211 (416)
-|||..|||...++. ..|+++-+.+.+..+..|..|+|+
T Consensus 222 v~~P~Y~i~~~~~d~k~~~~~l~~~~~~~~~~i~~~~g~~~~~ 264 (266)
T 3cw2_C 222 IGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 264 (266)
T ss_dssp SSSSEEEEEEEESCHHHHHHHHHHHHHHHHHHHTTTTCCEEEC
T ss_pred EcCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 368888888887763 468999999999999999999886
No 216
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=23.64 E-value=1.2e+02 Score=26.68 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=35.8
Q ss_pred HHHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHH
Q 014896 137 AIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLS 198 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~ 198 (416)
.|++.+.-...-+|+|+|.|.|.- ...|+.+ ..++++|+.+.+.++.+.+++.
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~----~~~l~~~-----~~~v~~vD~~~~~~~~a~~~~~ 134 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGAL----LAVLSEV-----AGEVWTFEAVEEFYKTAQKNLK 134 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHH----HHHHHHH-----SSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEeCCCccHH----HHHHHHh-----CCEEEEEecCHHHHHHHHHHHH
Confidence 566665544455899999987753 2333433 2489999999888887776654
No 217
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=23.56 E-value=1.3e+02 Score=28.58 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=38.1
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP 207 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp 207 (416)
+++...-...-.|+|.|.|.|. +.-.++.+- .|..+|+|++.+...++.+.+++ +..|++
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~~~~i~~a~~n~----~~~g~~ 254 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLDEKRLGLAREAA----LASGLS 254 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESCHHHHHHHHHHH----HHTTCT
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECCHHHHHHHHHHH----HHcCCC
Confidence 4444443445679999999885 222333221 14468999999988887776664 445664
No 218
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.27 E-value=80 Score=25.97 Aligned_cols=50 Identities=26% Similarity=0.547 Sum_probs=34.6
Q ss_pred eEEeecccc-CccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCCe
Q 014896 148 VHIIDLDIM-QGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLPF 208 (416)
Q Consensus 148 VHIIDf~i~-~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvpF 208 (416)
-=|||++-. ...+|..|++.|..+ .|++-||....+. .+.+.|+..|+|+
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~-----gl~~vGV~g~~~~------~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTST-----GLRIIGVSGCKDA------SLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTT-----TCEEEEEESCCCH------HHHHHHHHHTCCE
T ss_pred cEEEEccccCChHHHHHHHHHHHHc-----CCEEEEEeCCCcH------HHHHHHHHCCCCc
Confidence 347888733 468999999999877 3788888653221 1235677889986
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=22.78 E-value=1.1e+02 Score=28.78 Aligned_cols=111 Identities=10% Similarity=0.082 Sum_probs=61.1
Q ss_pred CeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHH-c-CCCeEEEeccccccc-cCc
Q 014896 146 DRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEK-L-GLPFEFCPVAEKVGN-LDP 222 (416)
Q Consensus 146 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~-l-gvpFeF~~v~~~~e~-l~~ 222 (416)
+.-+|+|+|.|.|. +...++.++ |.-++|+|+.+...++.+.+++.+.... + +-.++|..- ...+ +..
T Consensus 77 ~~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~--D~~~~l~~ 147 (314)
T 1uir_A 77 EPKRVLIVGGGEGA----TLREVLKHP---TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID--DARAYLER 147 (314)
T ss_dssp CCCEEEEEECTTSH----HHHHHTTST---TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES--CHHHHHHH
T ss_pred CCCeEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEc--hHHHHHHh
Confidence 34589999998885 556666653 4569999999988888888777654432 2 123444321 1111 100
Q ss_pred cccccCCCceEEEeeecccccccC-C--CchHHHHH-HHhcCCcEEEEec
Q 014896 223 ERLNISKREAVAVHWLQHSLYDVT-G--SDTNTLCL-LQRLAPKVVTVVE 268 (416)
Q Consensus 223 ~~l~~~~~EalaVn~l~h~l~~~~-~--~~~~~L~~-ir~L~P~vvtlvE 268 (416)
.-..=++++++...|...+.+ . ....++.. .+.|+|.-++++.
T Consensus 148 ---~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 148 ---TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp ---CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 001125666665433200010 0 02455655 4679998766654
No 220
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=21.47 E-value=1.3e+02 Score=27.45 Aligned_cols=60 Identities=12% Similarity=0.145 Sum_probs=37.7
Q ss_pred HHHhhhcCCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHHHHHHHHHcCCC
Q 014896 138 IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFAEKLGLP 207 (416)
Q Consensus 138 ILeA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~rL~~~A~~lgvp 207 (416)
+.+.+.-...-+|+|+|.+.|.-=..|.+.+. ..-+||+++.+...++.+.+++ +..|++
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~------~~~~v~avD~~~~~l~~~~~~~----~~~g~~ 134 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMK------NKGTIVAVEISKTRTKALKSNI----NRMGVL 134 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTT------TCSEEEEEESCHHHHHHHHHHH----HHTTCC
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcC------CCCEEEEECCCHHHHHHHHHHH----HHhCCC
Confidence 33444333445799999998864333433321 2358999999988887666554 456764
No 221
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=21.29 E-value=2.5e+02 Score=24.09 Aligned_cols=43 Identities=19% Similarity=0.214 Sum_probs=29.5
Q ss_pred CCeeEEeeccccCccccHHHHHHHhcCCCCCCeEEEeecCCCHHHHHHHHHH
Q 014896 145 EDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKR 196 (416)
Q Consensus 145 ~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~LRITgI~~~~~~l~~tg~r 196 (416)
.+.-.|+|+|.|.|.--. .|+.+ ++ ++|||+.+...++.+.++
T Consensus 39 ~~~~~vLdiG~G~G~~~~----~l~~~--~~---~v~~~D~s~~~~~~a~~~ 81 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLE----HFTKE--FG---DTAGLELSEDMLTHARKR 81 (239)
T ss_dssp TTCCEEEEETCTTSHHHH----HHHHH--HS---EEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEecccCCHHHH----HHHHh--CC---cEEEEeCCHHHHHHHHHh
Confidence 345689999999885433 33333 12 899999998877766554
No 222
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=21.02 E-value=1.5e+02 Score=27.44 Aligned_cols=50 Identities=10% Similarity=0.175 Sum_probs=35.2
Q ss_pred cCCeeEEeeccccCccccHHHHHHH---hc-CCCCC-CeEEEeecCCC---HHHHHHH
Q 014896 144 REDRVHIIDLDIMQGLQWPGLFHIL---AS-RPGGP-PYVRLTGLGTS---MEALEAT 193 (416)
Q Consensus 144 g~~~VHIIDf~i~~G~QWp~LiqaL---a~-R~ggp-P~LRITgI~~~---~~~l~~t 193 (416)
+.+..+|+|.|.|.|..=..+++++ .. .|.++ ..+++++|... .+.+..+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a 115 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALA 115 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHH
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHH
Confidence 6678999999999998877777765 21 34332 37999999864 3555544
No 223
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=20.52 E-value=54 Score=32.61 Aligned_cols=25 Identities=40% Similarity=0.518 Sum_probs=19.0
Q ss_pred HHHHhhhcCCeeEEeeccccCc--ccc
Q 014896 137 AIQEAFEREDRVHIIDLDIMQG--LQW 161 (416)
Q Consensus 137 aILeA~~g~~~VHIIDf~i~~G--~QW 161 (416)
||..+.+..+||=|||+|+.+| .|+
T Consensus 153 Aa~~l~~~~~RV~ivD~DvHHGnGtq~ 179 (376)
T 4a69_A 153 GILELLKYHPRVLYIDIDIHHGDGVQE 179 (376)
T ss_dssp HHHHHTTTCSCEEEEECSSSCCHHHHH
T ss_pred HHHHHHHhCCcEEEEeccCCCCcchhh
Confidence 3445566679999999999765 776
Done!