Query 014898
Match_columns 416
No_of_seqs 212 out of 1534
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 03:05:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014898.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014898hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m1sa_ b.1.11.2 (A:) WR4 {Nem 25.3 22 0.0016 26.8 3.0 49 9-64 1-49 (109)
2 d1qfoa_ b.1.1.1 (A:) N-termina 16.6 56 0.0041 22.9 3.7 26 27-55 77-102 (118)
3 d1rowa_ b.1.11.2 (A:) SSP-19 { 15.8 48 0.0035 24.7 3.1 45 13-64 2-46 (107)
4 d1wica_ b.1.11.2 (A:) MSP doma 10.7 1.2E+02 0.0089 23.5 4.3 48 11-64 18-68 (152)
5 d1ix2a_ b.1.18.17 (A:) Copper 10.4 73 0.0053 22.9 2.6 26 2-28 4-29 (102)
6 d2g5ra1 b.1.1.1 (A:24-144) N-t 7.0 1.2E+02 0.0087 21.6 2.6 25 27-54 81-105 (121)
7 d1grwa_ b.1.11.2 (A:) Major sp 6.1 1.9E+02 0.014 21.5 3.3 47 11-63 6-55 (124)
8 d1p2za1 b.121.2.2 (A:5-650) Ad 5.8 1.5E+02 0.011 28.7 3.1 41 21-61 51-91 (646)
9 d1a44a_ b.17.1.1 (A:) Phosphat 5.6 3.2E+02 0.023 21.6 4.8 19 41-59 113-131 (185)
10 d1jzga_ b.6.1.1 (A:) Azurin {P 4.9 1.6E+02 0.012 22.1 2.2 29 9-38 10-38 (128)
No 1
>d1m1sa_ b.1.11.2 (A:) WR4 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=25.27 E-value=22 Score=26.75 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=35.7
Q ss_pred cCccCcccccccccccccccceeeeecccCCCcccccceEEEEeeccccccccCCC
Q 014898 9 NTRLNFEPYTTHISSHRLTRTQLQLRSQSISSSKSSDQLILRSQSQFQSRLHVKPI 64 (416)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (416)
|+-+..+|.++..+.. ..+..++|.|... +++.|++++.+..+-.++|.
T Consensus 1 ~~~L~i~P~~l~F~~~-~g~~~~~l~N~s~------~~vafKiktt~~~~y~V~P~ 49 (109)
T d1m1sa_ 1 HSMINVDPPTGNYPAT-GGNSTHNITSESD------SRLAFKVKSSNNEHYRVRPV 49 (109)
T ss_dssp CCSEEEESSEEEECTT-CEEEEEEEEECSS------SEEEEEEEESCTTTEEEECS
T ss_pred CceEEEeCCEEEeecC-CCcEEEEEECCCC------CcEEEEEEcCCCCeEEEeCC
Confidence 4556788999999855 5567889998644 67888888887766665443
No 2
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.57 E-value=56 Score=22.91 Aligned_cols=26 Identities=15% Similarity=0.047 Sum_probs=17.8
Q ss_pred ccceeeeecccCCCcccccceEEEEeecc
Q 014898 27 TRTQLQLRSQSISSSKSSDQLILRSQSQF 55 (416)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (416)
....|+|.|++.+|+ ..|.+|++..+
T Consensus 77 ~~~sL~I~~v~~~Ds---G~Y~C~v~~~~ 102 (118)
T d1qfoa_ 77 KVCNLLLKDLKPEDS---GTYNFRFEISD 102 (118)
T ss_dssp TBCCEEECSCCGGGC---EEEEEEEECC-
T ss_pred CEEEEEECCCChhHC---EEEEEEEEeCC
Confidence 456688888888544 67888776554
No 3
>d1rowa_ b.1.11.2 (A:) SSP-19 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=15.82 E-value=48 Score=24.67 Aligned_cols=45 Identities=9% Similarity=0.274 Sum_probs=32.4
Q ss_pred CcccccccccccccccceeeeecccCCCcccccceEEEEeeccccccccCCC
Q 014898 13 NFEPYTTHISSHRLTRTQLQLRSQSISSSKSSDQLILRSQSQFQSRLHVKPI 64 (416)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (416)
..+|.+++++.. +....++|.|... .++-|++++.+..+=.++|.
T Consensus 2 ~~dP~~~~f~~~-~g~~~~~l~N~s~------~~vafKvKtt~~~~y~V~P~ 46 (107)
T d1rowa_ 2 TADPPACTVPAA-GVSSTHKLVNGGA------EKIVFKIKSSNNNEYRIAPV 46 (107)
T ss_dssp EEESSSEEEETT-CEEEEEEEEECSS------SCEEEEEEESCSSSEEEECS
T ss_pred eeCCCcceeeCC-CCeEEEEEEcCCC------CeEEEEEEcCCCCeEEEECC
Confidence 468999999844 5667899999654 66788888877766555443
No 4
>d1wica_ b.1.11.2 (A:) MSP domain containing protein 2, Mospd2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.68 E-value=1.2e+02 Score=23.53 Aligned_cols=48 Identities=15% Similarity=0.202 Sum_probs=32.4
Q ss_pred ccCcccc-cccccccccccc--eeeeecccCCCcccccceEEEEeeccccccccCCC
Q 014898 11 RLNFEPY-TTHISSHRLTRT--QLQLRSQSISSSKSSDQLILRSQSQFQSRLHVKPI 64 (416)
Q Consensus 11 ~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (416)
-+..+|. +|++..+...+. .|+|.|... +++.|++++....+-.++|.
T Consensus 18 lL~i~P~~~L~F~~~~~~~~~~~l~l~N~s~------~~vaFKiktt~p~~y~V~P~ 68 (152)
T d1wica_ 18 LLHISPAEELYFGSIESGEKKTLIVLTNVTK------NIVAFKVRTTAPEKYRVKPS 68 (152)
T ss_dssp SBCBBSSSCBCCCCSSSSCCCEEEEEEBCSS------SCEEEEEEESCTTTEEEESS
T ss_pred eEEEcCCCCeEeCCCCCCeEEEEEEEECCCC------CeEEEEEEcCCCccEEEECC
Confidence 4778886 588866555444 589999744 56788888877665555443
No 5
>d1ix2a_ b.1.18.17 (A:) Copper resistance protein C (CopC, PcoC) {Escherichia coli [TaxId: 562]}
Probab=10.45 E-value=73 Score=22.90 Aligned_cols=26 Identities=12% Similarity=0.232 Sum_probs=18.6
Q ss_pred CcccccccCccCccccccccccccccc
Q 014898 2 QYSIPCSNTRLNFEPYTTHISSHRLTR 28 (416)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (416)
++|-|-.+.-+. .|++.++.+++.-+
T Consensus 4 ~ss~Pa~gatl~-aP~~I~L~F~e~v~ 29 (102)
T d1ix2a_ 4 KSSVPQADSAVA-APEKIQLNFSENLT 29 (102)
T ss_dssp EEEESCTTCEES-CCSCEEEEESSCCC
T ss_pred eecCCCCCCEEc-CCCEEEEEeCCccc
Confidence 456677777787 88888888776433
No 6
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.05 E-value=1.2e+02 Score=21.64 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=18.1
Q ss_pred ccceeeeecccCCCcccccceEEEEeec
Q 014898 27 TRTQLQLRSQSISSSKSSDQLILRSQSQ 54 (416)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (416)
....|+|.|++.+|+ ..|..+++..
T Consensus 81 ~~~sL~I~~v~~~Ds---G~Y~C~v~~~ 105 (121)
T d2g5ra1 81 KNCTLSIRDARMSDA---GRYFFRMEKG 105 (121)
T ss_dssp TBCCEEECSCCGGGC---EEEEEEEEET
T ss_pred CEEEEEECCCChHHC---EEEEEEEEeC
Confidence 466788888888665 5777777654
No 7
>d1grwa_ b.1.11.2 (A:) Major sperm protein, MSP {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=6.11 E-value=1.9e+02 Score=21.53 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=30.1
Q ss_pred ccCcccc-ccccccc--ccccceeeeecccCCCcccccceEEEEeeccccccccCC
Q 014898 11 RLNFEPY-TTHISSH--RLTRTQLQLRSQSISSSKSSDQLILRSQSQFQSRLHVKP 63 (416)
Q Consensus 11 ~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (416)
.+.++|. +|....+ +.....+++.|... +++.|++.+....+-.++|
T Consensus 6 ~l~i~P~~~L~F~~p~~~~~~~~l~l~N~s~------~~vafKvktt~p~~y~v~P 55 (124)
T d1grwa_ 6 DIQTQPGTKIVFNAPYDDKHTYHIKVINSSA------RRIGYGIKTTNMKRLGVDP 55 (124)
T ss_dssp CEEEESSSCEEEESCCSSCEEEEEEEEECSS------SCEEEEEEESCTTTEEEES
T ss_pred ceEECCCCeEEEecCCCcEEEEEEEEECCCC------CeEEEEEEeCCCceEEEEC
Confidence 4677884 4666543 44555688888754 5677888777666554433
No 8
>d1p2za1 b.121.2.2 (A:5-650) Adenovirus hexon {Human adenovirus type 2 [TaxId: 10515]}
Probab=5.82 E-value=1.5e+02 Score=28.67 Aligned_cols=41 Identities=12% Similarity=0.078 Sum_probs=34.9
Q ss_pred ccccccccceeeeecccCCCcccccceEEEEeecccccccc
Q 014898 21 ISSHRLTRTQLQLRSQSISSSKSSDQLILRSQSQFQSRLHV 61 (416)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (416)
+.-|||++.||+|.=|+.+|-+.+++-+|++.--|.+.+..
T Consensus 51 VTTerSQRLqlRfvPv~~eDt~~sYk~RftL~VGDnrVLDM 91 (646)
T d1p2za1 51 VTTDRSQRLTLRFIPVDREDTAYSYKARFTLAVGDNRVLDM 91 (646)
T ss_dssp SBCCSCCCSEEEECCSEEEECSSEEEEEEEEEECTTCCEEG
T ss_pred CCcchhhcceEeEecCcccCCCceEEEEEEEeeCccceeec
Confidence 77799999999999999999888888888888777766543
No 9
>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.64 E-value=3.2e+02 Score=21.63 Aligned_cols=19 Identities=5% Similarity=-0.132 Sum_probs=14.5
Q ss_pred cccccceEEEEeecccccc
Q 014898 41 SKSSDQLILRSQSQFQSRL 59 (416)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~ 59 (416)
.++.+||.|-+.-|+++..
T Consensus 113 gtg~HRYvflLf~Q~~~~~ 131 (185)
T d1a44a_ 113 GTGLHRYVWLVYEQEGPLK 131 (185)
T ss_dssp TSCCEEEEEEEEECSSCCC
T ss_pred CCCceEEEEEEEEccCCCC
Confidence 3456899999999976543
No 10
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]}
Probab=4.94 E-value=1.6e+02 Score=22.05 Aligned_cols=29 Identities=10% Similarity=0.237 Sum_probs=22.1
Q ss_pred cCccCcccccccccccccccceeeeecccC
Q 014898 9 NTRLNFEPYTTHISSHRLTRTQLQLRSQSI 38 (416)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (416)
+....|+|+++++. +...++.+++.|.-.
T Consensus 10 ~d~m~Fd~~~i~V~-k~Ge~v~l~~~N~g~ 38 (128)
T d1jzga_ 10 NDQMQFNTNAITVD-KSCKQFTVNLSHPGN 38 (128)
T ss_dssp CTTSCBSCSEEEEC-TTCSEEEEEEECCSS
T ss_pred CCcccCccceEEEe-cCCCEEEEEEEeCCc
Confidence 44678999999996 345688899988653
Done!