Query 014901
Match_columns 416
No_of_seqs 208 out of 566
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 03:08:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqc_A Thiol peroxidase, perox 99.9 2.1E-26 7.3E-31 205.0 9.2 155 200-403 5-161 (164)
2 4g2e_A Peroxiredoxin; redox pr 99.9 3.5E-25 1.2E-29 194.9 14.5 153 199-400 3-156 (157)
3 3mng_A Peroxiredoxin-5, mitoch 99.9 7.1E-22 2.4E-26 178.8 15.0 154 197-397 12-173 (173)
4 3sbc_A Peroxiredoxin TSA1; alp 99.9 9.1E-22 3.1E-26 185.9 15.2 165 199-415 22-204 (216)
5 3keb_A Probable thiol peroxida 99.9 3.5E-21 1.2E-25 182.7 16.9 153 196-404 18-178 (224)
6 3tue_A Tryparedoxin peroxidase 99.9 1.7E-21 5.7E-26 184.5 14.7 166 197-413 23-206 (219)
7 3p7x_A Probable thiol peroxida 99.9 8.8E-21 3E-25 166.7 15.6 147 197-400 17-166 (166)
8 3uma_A Hypothetical peroxiredo 99.8 3.8E-21 1.3E-25 175.6 12.4 152 199-397 25-184 (184)
9 1xiy_A Peroxiredoxin, pfaop; a 99.8 7.7E-21 2.6E-25 174.5 13.3 161 201-399 2-179 (182)
10 1tp9_A Peroxiredoxin, PRX D (t 99.8 5.8E-21 2E-25 168.2 11.8 150 200-397 4-162 (162)
11 1psq_A Probable thiol peroxida 99.8 3.2E-20 1.1E-24 162.7 16.1 148 197-400 13-163 (163)
12 3drn_A Peroxiredoxin, bacterio 99.8 2.2E-20 7.5E-25 163.1 14.9 154 200-410 2-157 (161)
13 3ixr_A Bacterioferritin comigr 99.8 9.9E-21 3.4E-25 169.5 11.2 152 199-402 20-178 (179)
14 2yzh_A Probable thiol peroxida 99.8 4.2E-20 1.5E-24 162.8 13.9 149 198-400 19-170 (171)
15 3gkn_A Bacterioferritin comigr 99.8 4.5E-20 1.5E-24 160.2 13.8 152 199-402 6-162 (163)
16 2xhf_A Peroxiredoxin 5; oxidor 99.8 4.9E-21 1.7E-25 174.5 8.0 153 198-398 12-170 (171)
17 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 4.2E-20 1.4E-24 165.2 13.5 151 200-399 3-161 (167)
18 1q98_A Thiol peroxidase, TPX; 99.8 5.1E-20 1.8E-24 162.0 13.2 147 199-398 16-165 (165)
19 2pwj_A Mitochondrial peroxired 99.8 1.8E-19 6.1E-24 161.3 14.8 132 236-397 33-171 (171)
20 4eo3_A Bacterioferritin comigr 99.8 5E-20 1.7E-24 182.1 12.3 137 234-413 13-150 (322)
21 3zrd_A Thiol peroxidase; oxido 99.8 1.5E-19 5E-24 165.8 14.3 149 197-398 49-200 (200)
22 1n8j_A AHPC, alkyl hydroperoxi 99.8 2.9E-19 9.8E-24 161.2 14.4 149 201-403 2-157 (186)
23 4f82_A Thioredoxin reductase; 99.8 8.8E-20 3E-24 167.4 11.1 161 199-398 9-175 (176)
24 3qpm_A Peroxiredoxin; oxidored 99.8 4.3E-19 1.5E-23 167.9 14.9 153 198-402 46-206 (240)
25 3tjj_A Peroxiredoxin-4; thiore 99.8 4.6E-19 1.6E-23 169.7 14.2 153 198-402 60-220 (254)
26 2pn8_A Peroxiredoxin-4; thiore 99.8 5.9E-19 2E-23 163.1 14.4 155 198-404 17-179 (211)
27 1prx_A HORF6; peroxiredoxin, h 99.8 8.3E-19 2.8E-23 164.3 15.4 157 199-404 4-171 (224)
28 1xvw_A Hypothetical protein RV 99.8 1.2E-18 4E-23 150.5 15.0 148 200-401 9-159 (160)
29 2v2g_A Peroxiredoxin 6; oxidor 99.8 7E-19 2.4E-23 166.6 14.3 156 200-404 3-167 (233)
30 1we0_A Alkyl hydroperoxide red 99.8 8.3E-19 2.8E-23 156.6 13.3 147 201-402 2-157 (187)
31 2i81_A 2-Cys peroxiredoxin; st 99.8 1.9E-18 6.5E-23 159.9 16.1 153 198-403 19-181 (213)
32 2c0d_A Thioredoxin peroxidase 99.8 1.4E-18 4.7E-23 162.5 15.3 152 200-404 25-186 (221)
33 2h01_A 2-Cys peroxiredoxin; th 99.8 1E-18 3.6E-23 156.9 13.6 149 202-403 2-160 (192)
34 1xvq_A Thiol peroxidase; thior 99.8 3.8E-18 1.3E-22 151.6 16.3 150 197-400 15-166 (175)
35 1zye_A Thioredoxin-dependent p 99.8 2.2E-18 7.5E-23 160.0 15.0 157 196-404 23-187 (220)
36 2jsy_A Probable thiol peroxida 99.8 3.1E-18 1.1E-22 149.4 15.1 149 197-401 15-166 (167)
37 1nm3_A Protein HI0572; hybrid, 99.8 1.2E-18 4.1E-23 162.3 13.2 152 200-399 3-164 (241)
38 1xcc_A 1-Cys peroxiredoxin; un 99.8 3.8E-18 1.3E-22 159.4 14.7 158 200-404 3-168 (220)
39 3ztl_A Thioredoxin peroxidase; 99.8 3.7E-18 1.3E-22 158.4 14.3 155 198-404 38-200 (222)
40 1uul_A Tryparedoxin peroxidase 99.8 8.1E-18 2.8E-22 152.8 15.4 153 198-403 4-166 (202)
41 2bmx_A Alkyl hydroperoxidase C 99.8 6.4E-18 2.2E-22 152.4 14.3 158 199-402 3-170 (195)
42 2a4v_A Peroxiredoxin DOT5; yea 99.8 3.4E-18 1.2E-22 148.6 11.4 146 199-401 6-153 (159)
43 1zof_A Alkyl hydroperoxide-red 99.7 2.7E-17 9.1E-22 148.4 14.1 151 201-404 2-163 (198)
44 1qmv_A Human thioredoxin perox 99.7 4.6E-17 1.6E-21 147.0 15.5 150 200-403 5-164 (197)
45 3a2v_A Probable peroxiredoxin; 99.7 7.8E-17 2.7E-21 154.6 14.6 150 200-403 5-163 (249)
46 3kcm_A Thioredoxin family prot 99.7 2.5E-16 8.5E-21 134.1 11.9 140 201-403 3-144 (154)
47 2f9s_A Thiol-disulfide oxidore 99.7 8.8E-16 3E-20 130.8 12.9 131 234-410 15-146 (151)
48 3gl3_A Putative thiol:disulfid 99.7 1E-15 3.6E-20 129.9 13.1 138 200-401 3-141 (152)
49 2lrn_A Thiol:disulfide interch 99.6 1.2E-15 4.1E-20 130.8 12.2 141 200-408 3-147 (152)
50 2ywi_A Hypothetical conserved 99.6 3E-15 1E-19 133.1 14.9 146 198-404 16-176 (196)
51 2l5o_A Putative thioredoxin; s 99.6 4E-15 1.4E-19 126.5 14.2 143 200-408 2-147 (153)
52 3u5r_E Uncharacterized protein 99.6 3E-15 1E-19 138.0 14.0 147 198-404 30-189 (218)
53 3ewl_A Uncharacterized conserv 99.6 4.7E-15 1.6E-19 124.8 13.4 133 201-401 2-140 (142)
54 1xzo_A BSSCO, hypothetical pro 99.6 4E-15 1.4E-19 129.4 13.3 158 196-401 3-171 (174)
55 3hcz_A Possible thiol-disulfid 99.6 3.1E-15 1E-19 125.6 10.8 138 198-400 3-144 (148)
56 3eyt_A Uncharacterized protein 99.6 6.5E-15 2.2E-19 126.1 12.5 124 234-404 17-154 (158)
57 2lrt_A Uncharacterized protein 99.6 1.4E-14 4.7E-19 125.4 14.5 135 198-398 7-144 (152)
58 3fw2_A Thiol-disulfide oxidore 99.6 1.6E-14 5.6E-19 123.4 13.8 136 199-402 4-148 (150)
59 3hdc_A Thioredoxin family prot 99.6 1.5E-14 5.1E-19 124.9 13.4 137 197-399 12-149 (158)
60 3fkf_A Thiol-disulfide oxidore 99.6 9.9E-15 3.4E-19 122.5 11.9 135 199-401 4-145 (148)
61 3or5_A Thiol:disulfide interch 99.6 2E-14 6.9E-19 123.3 14.0 148 198-405 6-154 (165)
62 3erw_A Sporulation thiol-disul 99.6 1.2E-14 4.1E-19 121.2 12.1 137 194-397 3-144 (145)
63 1jfu_A Thiol:disulfide interch 99.6 1.6E-14 5.6E-19 127.6 12.6 145 199-402 33-180 (186)
64 3kh7_A Thiol:disulfide interch 99.6 4.8E-14 1.7E-18 125.2 15.4 140 198-404 28-169 (176)
65 3lwa_A Secreted thiol-disulfid 99.6 3.2E-14 1.1E-18 125.6 13.1 144 199-402 30-181 (183)
66 3ia1_A THIO-disulfide isomeras 99.5 2.4E-14 8.1E-19 122.1 11.2 139 199-407 4-149 (154)
67 4fo5_A Thioredoxin-like protei 99.5 2.1E-14 7E-19 121.8 10.8 133 197-398 4-141 (143)
68 3lor_A Thiol-disulfide isomera 99.5 3.6E-14 1.2E-18 121.4 12.1 122 234-402 19-155 (160)
69 2cvb_A Probable thiol-disulfid 99.5 3.3E-14 1.1E-18 126.1 12.3 144 199-404 6-161 (188)
70 3eur_A Uncharacterized protein 99.5 5.3E-14 1.8E-18 119.1 12.5 132 199-398 4-141 (142)
71 3raz_A Thioredoxin-related pro 99.5 5.3E-14 1.8E-18 120.3 12.0 130 234-408 13-146 (151)
72 2obi_A PHGPX, GPX-4, phospholi 99.5 7.5E-14 2.6E-18 124.0 12.0 154 192-399 13-181 (183)
73 1lu4_A Soluble secreted antige 99.5 2.6E-13 8.7E-18 112.2 13.9 121 234-400 13-134 (136)
74 1zzo_A RV1677; thioredoxin fol 99.5 3E-13 1E-17 111.2 14.3 119 234-401 14-134 (136)
75 2ls5_A Uncharacterized protein 99.3 1.3E-15 4.5E-20 131.1 0.0 144 199-403 6-152 (159)
76 2b5x_A YKUV protein, TRXY; thi 99.5 2.3E-13 7.9E-18 113.8 13.7 137 201-402 2-145 (148)
77 2v1m_A Glutathione peroxidase; 99.5 1.4E-13 4.7E-18 118.8 11.9 147 199-401 4-166 (169)
78 2b1k_A Thiol:disulfide interch 99.5 3.2E-13 1.1E-17 117.2 14.2 137 199-401 21-159 (168)
79 4evm_A Thioredoxin family prot 99.5 3.7E-13 1.3E-17 110.1 13.3 119 234-400 11-137 (138)
80 2lja_A Putative thiol-disulfid 99.5 8E-14 2.7E-18 118.2 9.6 140 200-404 3-145 (152)
81 2gs3_A PHGPX, GPX-4, phospholi 99.5 1.9E-13 6.4E-18 122.1 11.6 148 198-399 21-183 (185)
82 2hyx_A Protein DIPZ; thioredox 99.5 7.2E-13 2.5E-17 132.7 15.1 156 188-404 39-201 (352)
83 3ha9_A Uncharacterized thiored 99.5 1.5E-13 5.1E-18 118.9 8.9 117 234-401 26-163 (165)
84 2p5q_A Glutathione peroxidase 99.4 3.4E-13 1.2E-17 116.4 10.6 144 199-401 5-167 (170)
85 2vup_A Glutathione peroxidase- 99.4 7.9E-13 2.7E-17 118.5 13.2 134 234-403 37-186 (190)
86 2ggt_A SCO1 protein homolog, m 99.4 9.9E-13 3.4E-17 112.8 12.8 135 234-402 12-161 (164)
87 3me7_A Putative uncharacterize 99.4 6.7E-13 2.3E-17 117.6 12.0 146 201-402 2-162 (170)
88 3dwv_A Glutathione peroxidase- 99.4 6.8E-13 2.3E-17 118.9 11.3 145 199-401 19-182 (187)
89 3cmi_A Peroxiredoxin HYR1; thi 99.4 4.3E-13 1.5E-17 117.6 9.4 125 234-401 21-167 (171)
90 1kng_A Thiol:disulfide interch 99.4 3.2E-12 1.1E-16 108.5 14.3 144 198-401 6-151 (156)
91 2k6v_A Putative cytochrome C o 99.4 4.3E-13 1.5E-17 116.0 8.5 135 234-400 25-171 (172)
92 2h30_A Thioredoxin, peptide me 99.4 4E-12 1.4E-16 109.0 13.9 122 234-402 27-156 (164)
93 2p31_A CL683, glutathione pero 99.4 7.3E-13 2.5E-17 117.9 8.2 147 198-400 21-179 (181)
94 2rli_A SCO2 protein homolog, m 99.4 1.1E-11 3.7E-16 107.3 14.6 137 234-404 15-166 (171)
95 2f8a_A Glutathione peroxidase 99.3 1.1E-11 3.9E-16 114.1 14.4 171 188-401 11-206 (208)
96 3kij_A Probable glutathione pe 99.3 2.9E-12 1E-16 113.6 10.0 76 234-312 27-112 (180)
97 2b7k_A SCO1 protein; metalloch 99.3 8.2E-12 2.8E-16 113.3 12.3 141 234-401 30-182 (200)
98 2i3y_A Epididymal secretory gl 99.3 3.5E-11 1.2E-15 112.4 16.0 145 234-402 44-211 (215)
99 2r37_A Glutathione peroxidase 99.3 5.5E-11 1.9E-15 110.0 15.1 145 234-402 26-193 (207)
100 1i5g_A Tryparedoxin II; electr 99.3 1E-11 3.5E-16 105.0 7.8 108 234-382 17-129 (144)
101 4hde_A SCO1/SENC family lipopr 99.2 5.1E-10 1.7E-14 99.5 17.3 136 234-401 21-169 (170)
102 1o8x_A Tryparedoxin, TRYX, TXN 99.2 1.8E-11 6E-16 104.0 6.4 109 234-384 18-131 (146)
103 2lus_A Thioredoxion; CR-Trp16, 98.8 2.8E-12 9.6E-17 107.3 0.0 112 234-385 13-131 (143)
104 3s9f_A Tryparedoxin; thioredox 99.2 1.4E-11 4.9E-16 108.3 4.4 105 234-380 38-147 (165)
105 1o73_A Tryparedoxin; electron 99.2 7.3E-11 2.5E-15 99.3 8.5 105 234-380 18-127 (144)
106 4h86_A Peroxiredoxin type-2; o 98.7 1.8E-07 6.3E-12 87.4 12.5 129 236-396 58-198 (199)
107 2l57_A Uncharacterized protein 98.4 2.5E-06 8.6E-11 70.3 10.3 96 244-404 24-119 (126)
108 2ju5_A Thioredoxin disulfide i 98.2 1.8E-06 6.1E-11 74.9 6.4 113 235-402 37-152 (154)
109 2fwh_A Thiol:disulfide interch 97.9 1.5E-05 5.1E-10 67.1 6.8 103 237-404 23-130 (134)
110 2pu9_C TRX-F, thioredoxin F-ty 97.9 0.00016 5.4E-09 58.0 11.4 86 246-400 24-109 (111)
111 2kuc_A Putative disulphide-iso 97.9 5.7E-05 2E-09 62.1 8.9 94 245-403 26-122 (130)
112 3fk8_A Disulphide isomerase; A 97.8 5.9E-05 2E-09 62.6 8.5 101 245-401 28-132 (133)
113 1faa_A Thioredoxin F; electron 97.8 0.00023 7.7E-09 58.2 11.1 41 245-288 36-76 (124)
114 2e0q_A Thioredoxin; electron t 97.7 0.00021 7E-09 55.4 9.8 46 241-288 10-55 (104)
115 3hxs_A Thioredoxin, TRXP; elec 97.7 9.6E-05 3.3E-09 61.8 7.4 81 232-315 38-118 (141)
116 1thx_A Thioredoxin, thioredoxi 97.6 0.00057 1.9E-08 54.3 10.9 88 246-401 25-112 (115)
117 1xfl_A Thioredoxin H1; AT3G510 97.6 0.00044 1.5E-08 57.4 10.5 40 246-288 38-77 (124)
118 2voc_A Thioredoxin; electron t 97.6 0.00028 9.5E-09 57.0 8.9 46 241-288 12-57 (112)
119 3emx_A Thioredoxin; structural 97.5 0.00023 7.8E-09 59.9 7.9 103 241-405 27-129 (135)
120 3d22_A TRXH4, thioredoxin H-ty 97.5 0.001 3.6E-08 55.4 11.1 41 245-288 45-85 (139)
121 3die_A Thioredoxin, TRX; elect 97.4 0.00024 8.3E-09 55.7 6.0 74 240-315 13-86 (106)
122 2f51_A Thioredoxin; electron t 97.4 4.8E-05 1.6E-09 62.7 1.8 76 234-311 9-85 (118)
123 2j23_A Thioredoxin; immune pro 97.4 0.00027 9.2E-09 58.1 6.0 75 240-314 26-100 (121)
124 2vim_A Thioredoxin, TRX; thior 97.2 0.00052 1.8E-08 53.6 5.9 65 246-313 19-83 (104)
125 1sen_A Thioredoxin-like protei 97.1 0.00025 8.4E-09 62.3 3.6 70 244-315 44-116 (164)
126 1ep7_A Thioredoxin CH1, H-type 97.1 0.001 3.6E-08 52.8 6.7 58 246-305 24-81 (112)
127 3hz4_A Thioredoxin; NYSGXRC, P 97.1 0.0042 1.4E-07 52.3 10.7 40 246-287 24-63 (140)
128 3uvt_A Thioredoxin domain-cont 97.0 0.00083 2.9E-08 53.0 5.5 74 240-314 15-90 (111)
129 2vm1_A Thioredoxin, thioredoxi 97.0 0.0012 4E-08 52.8 6.4 62 246-310 28-89 (118)
130 3f3q_A Thioredoxin-1; His TAG, 97.0 0.00098 3.3E-08 53.7 5.9 77 237-315 14-90 (109)
131 2dj1_A Protein disulfide-isome 97.0 0.002 6.9E-08 53.4 7.6 73 241-313 28-102 (140)
132 2vlu_A Thioredoxin, thioredoxi 97.0 0.0016 5.4E-08 52.8 6.7 57 246-305 34-90 (122)
133 3d6i_A Monothiol glutaredoxin- 96.9 0.0019 6.6E-08 51.5 6.8 65 246-311 21-85 (112)
134 1nsw_A Thioredoxin, TRX; therm 96.9 0.0015 5.3E-08 51.1 6.0 67 242-310 12-79 (105)
135 1syr_A Thioredoxin; SGPP, stru 96.9 0.0014 4.7E-08 52.7 5.8 67 240-308 19-85 (112)
136 1fb6_A Thioredoxin M; electron 96.9 0.0023 8E-08 49.8 6.9 63 245-309 17-79 (105)
137 1w4v_A Thioredoxin, mitochondr 96.9 0.0022 7.6E-08 52.3 7.0 62 246-309 31-92 (119)
138 3sei_A Caskin-1; SAM domain, p 96.8 0.00043 1.5E-08 61.5 2.6 99 5-105 12-132 (149)
139 3m9j_A Thioredoxin; oxidoreduc 96.8 0.0017 5.8E-08 50.8 5.7 67 245-314 19-85 (105)
140 3aps_A DNAJ homolog subfamily 96.8 0.0023 8E-08 51.7 6.6 70 246-317 21-90 (122)
141 2yzu_A Thioredoxin; redox prot 96.8 0.0017 5.9E-08 50.7 5.5 67 242-310 13-80 (109)
142 1t00_A Thioredoxin, TRX; redox 96.8 0.0025 8.4E-08 50.7 6.5 60 246-307 23-82 (112)
143 2i4a_A Thioredoxin; acidophIle 96.8 0.0022 7.6E-08 50.1 6.2 62 246-309 20-81 (107)
144 3qfa_C Thioredoxin; protein-pr 96.8 0.0024 8.3E-08 52.0 6.5 64 246-312 31-94 (116)
145 1xwb_A Thioredoxin; dimerizati 96.8 0.0025 8.6E-08 49.7 6.3 62 246-309 20-81 (106)
146 2oe3_A Thioredoxin-3; electron 96.8 0.0014 4.8E-08 53.5 4.9 66 241-308 24-89 (114)
147 2l5l_A Thioredoxin; structural 96.7 0.0024 8.3E-08 53.4 6.4 69 245-315 37-105 (136)
148 4euy_A Uncharacterized protein 96.7 0.0017 5.9E-08 51.5 4.9 74 240-315 11-84 (105)
149 3tco_A Thioredoxin (TRXA-1); d 96.7 0.0023 8E-08 50.0 5.7 71 242-313 16-86 (109)
150 1x5d_A Protein disulfide-isome 96.7 0.0028 9.6E-08 51.8 6.2 69 246-314 24-95 (133)
151 2dml_A Protein disulfide-isome 96.6 0.0026 9E-08 52.0 5.5 67 246-314 35-101 (130)
152 1ti3_A Thioredoxin H, PTTRXH1; 96.6 0.0024 8E-08 50.6 4.9 64 247-312 26-89 (113)
153 1dby_A Chloroplast thioredoxin 96.6 0.005 1.7E-07 48.3 6.7 62 246-309 19-80 (107)
154 3ul3_B Thioredoxin, thioredoxi 96.5 0.004 1.4E-07 51.3 6.3 70 244-315 40-109 (128)
155 2yj7_A LPBCA thioredoxin; oxid 95.5 0.00039 1.4E-08 54.0 0.0 43 246-290 19-61 (106)
156 2xc2_A Thioredoxinn; oxidoredu 96.5 0.0044 1.5E-07 49.9 6.3 60 245-308 32-91 (117)
157 2trx_A Thioredoxin; electron t 96.5 0.0056 1.9E-07 48.1 6.5 64 245-309 18-81 (108)
158 3gnj_A Thioredoxin domain prot 96.5 0.005 1.7E-07 48.5 6.3 68 245-314 21-88 (111)
159 2ppt_A Thioredoxin-2; thiredox 96.5 0.0056 1.9E-07 53.0 6.9 72 240-313 57-129 (155)
160 2i1u_A Thioredoxin, TRX, MPT46 96.4 0.0059 2E-07 49.0 6.6 63 246-310 30-92 (121)
161 2dj3_A Protein disulfide-isome 96.3 0.0036 1.2E-07 51.4 4.3 68 246-314 25-93 (133)
162 3idv_A Protein disulfide-isome 96.3 0.0073 2.5E-07 54.3 6.8 72 241-312 26-99 (241)
163 1gh2_A Thioredoxin-like protei 96.2 0.0079 2.7E-07 47.5 6.2 62 246-310 21-82 (107)
164 1x5e_A Thioredoxin domain cont 96.2 0.0075 2.6E-07 49.2 6.2 67 241-309 18-84 (126)
165 1wmj_A Thioredoxin H-type; str 96.2 0.0011 3.8E-08 54.0 1.1 60 246-308 36-95 (130)
166 2kiv_A Ankyrin repeat and ster 96.2 0.002 6.9E-08 56.8 2.8 101 5-105 16-142 (148)
167 2wz9_A Glutaredoxin-3; protein 96.2 0.0055 1.9E-07 52.4 5.3 66 246-314 32-97 (153)
168 2l6c_A Thioredoxin; oxidoreduc 96.1 0.012 4.1E-07 47.3 6.7 69 241-312 14-82 (110)
169 2lst_A Thioredoxin; structural 95.1 0.00094 3.2E-08 54.9 0.0 75 235-312 9-88 (130)
170 2djj_A PDI, protein disulfide- 96.0 0.007 2.4E-07 48.7 5.0 43 245-288 24-70 (121)
171 3p2a_A Thioredoxin 2, putative 96.0 0.011 3.6E-07 49.9 6.2 69 245-315 54-122 (148)
172 1mek_A Protein disulfide isome 96.0 0.0031 1E-07 50.1 2.7 71 242-312 19-91 (120)
173 2o8v_B Thioredoxin 1; disulfid 96.0 0.008 2.7E-07 50.1 5.2 64 245-309 38-101 (128)
174 1wou_A Thioredoxin -related pr 95.9 0.013 4.3E-07 48.3 6.2 43 246-289 24-72 (123)
175 1r26_A Thioredoxin; redox-acti 95.9 0.0093 3.2E-07 49.7 5.3 57 246-305 37-93 (125)
176 1z6n_A Hypothetical protein PA 95.8 0.0078 2.7E-07 53.7 4.7 67 247-315 54-123 (167)
177 3ira_A Conserved protein; meth 95.7 0.05 1.7E-06 49.1 9.5 42 362-404 105-149 (173)
178 3dxb_A Thioredoxin N-terminall 95.6 0.016 5.3E-07 52.8 6.0 68 245-314 29-96 (222)
179 3f9u_A Putative exported cytoc 95.6 0.0093 3.2E-07 51.5 4.2 44 245-290 46-92 (172)
180 2dj0_A Thioredoxin-related tra 95.5 0.008 2.7E-07 50.1 3.3 68 248-316 28-101 (137)
181 3cxg_A Putative thioredoxin; m 95.5 0.028 9.7E-07 47.0 6.6 59 248-309 41-99 (133)
182 3h79_A Thioredoxin-like protei 95.4 0.039 1.3E-06 45.2 7.1 67 246-313 33-103 (127)
183 1v98_A Thioredoxin; oxidoreduc 95.3 0.034 1.2E-06 46.3 6.6 65 246-312 50-114 (140)
184 3gix_A Thioredoxin-like protei 95.0 0.045 1.6E-06 47.0 6.7 68 247-315 23-90 (149)
185 1zma_A Bacterocin transport ac 95.0 0.033 1.1E-06 44.9 5.4 39 246-288 29-67 (118)
186 3q6o_A Sulfhydryl oxidase 1; p 94.9 0.046 1.6E-06 50.1 6.9 66 246-311 29-98 (244)
187 1fo5_A Thioredoxin; disulfide 94.8 0.02 6.8E-07 42.9 3.5 59 249-308 4-62 (85)
188 3ph9_A Anterior gradient prote 94.8 0.019 6.5E-07 50.5 3.8 74 245-321 43-120 (151)
189 1nho_A Probable thioredoxin; b 94.7 0.024 8.2E-07 42.4 3.7 57 251-308 5-61 (85)
190 1qgv_A Spliceosomal protein U5 94.3 0.052 1.8E-06 46.2 5.4 73 246-320 23-95 (142)
191 1x40_A ARAP2; ASAP-related pro 94.3 0.044 1.5E-06 44.6 4.4 65 4-70 16-86 (91)
192 2b5e_A Protein disulfide-isome 94.2 0.067 2.3E-06 54.3 6.8 73 240-312 24-96 (504)
193 1a8l_A Protein disulfide oxido 94.2 0.085 2.9E-06 47.1 6.7 64 246-309 133-199 (226)
194 3idv_A Protein disulfide-isome 94.1 0.046 1.6E-06 49.0 4.7 73 241-313 141-215 (241)
195 3ed3_A Protein disulfide-isome 94.1 0.064 2.2E-06 51.6 6.0 67 246-314 35-103 (298)
196 3apq_A DNAJ homolog subfamily 94.0 0.054 1.9E-06 48.6 5.1 63 245-309 113-175 (210)
197 1wjk_A C330018D20RIK protein; 94.0 0.15 5.1E-06 41.0 7.2 49 235-289 4-52 (100)
198 3f8u_A Protein disulfide-isome 93.9 0.086 2.9E-06 53.0 6.7 67 246-314 370-437 (481)
199 2trc_P Phosducin, MEKA, PP33; 93.7 0.053 1.8E-06 50.1 4.4 65 247-315 121-185 (217)
200 3qou_A Protein YBBN; thioredox 93.7 0.057 2E-06 50.3 4.7 65 246-312 26-90 (287)
201 3qcp_A QSOX from trypanosoma b 92.6 0.18 6.2E-06 52.4 6.9 66 247-313 43-115 (470)
202 3gyk_A 27KDA outer membrane pr 92.4 0.12 4E-06 44.6 4.4 48 235-286 12-59 (175)
203 1eej_A Thiol:disulfide interch 92.1 0.075 2.6E-06 48.4 3.0 38 246-287 85-122 (216)
204 2ywm_A Glutaredoxin-like prote 92.1 0.23 7.9E-06 44.5 6.2 61 246-308 135-195 (229)
205 2b5e_A Protein disulfide-isome 92.1 0.18 6.3E-06 51.1 6.1 43 245-288 375-419 (504)
206 2hls_A Protein disulfide oxido 91.9 0.3 1E-05 45.3 6.9 62 247-308 138-202 (243)
207 3kp8_A Vkorc1/thioredoxin doma 91.9 0.032 1.1E-06 45.6 0.1 38 237-276 4-41 (106)
208 1wik_A Thioredoxin-like protei 91.9 0.4 1.4E-05 39.0 6.8 40 240-287 8-51 (109)
209 3zzx_A Thioredoxin; oxidoreduc 91.5 0.38 1.3E-05 39.0 6.3 42 246-290 20-61 (105)
210 2r2j_A Thioredoxin domain-cont 91.5 0.17 5.7E-06 49.9 4.8 64 242-305 17-85 (382)
211 2e7p_A Glutaredoxin; thioredox 91.4 0.1 3.5E-06 41.8 2.7 30 241-272 14-43 (116)
212 2dbc_A PDCL2, unnamed protein 91.3 0.28 9.6E-06 41.0 5.4 68 249-321 32-99 (135)
213 1z6m_A Conserved hypothetical 91.0 0.21 7.1E-06 43.1 4.5 49 237-287 19-68 (175)
214 1t3b_A Thiol:disulfide interch 90.9 0.17 5.7E-06 46.0 4.0 37 246-286 85-121 (211)
215 3l9v_A Putative thiol-disulfid 90.9 0.12 4.1E-06 46.1 2.9 39 246-286 14-55 (189)
216 1oaz_A Thioredoxin 1; immune s 90.8 0.23 7.7E-06 40.9 4.3 64 245-309 19-96 (123)
217 1a8l_A Protein disulfide oxido 90.6 0.62 2.1E-05 41.4 7.4 43 246-290 21-64 (226)
218 2yan_A Glutaredoxin-3; oxidore 90.6 0.15 5.1E-06 41.1 3.0 31 240-271 10-44 (105)
219 3hd5_A Thiol:disulfide interch 90.6 0.18 6.2E-06 44.4 3.8 41 246-287 24-64 (195)
220 2es7_A Q8ZP25_salty, putative 90.3 0.1 3.6E-06 44.9 1.9 76 240-317 27-106 (142)
221 1ilo_A Conserved hypothetical 90.2 0.59 2E-05 34.2 5.8 54 250-308 3-56 (77)
222 2kso_A Ephrin type-A receptor 90.1 0.069 2.4E-06 42.7 0.5 51 55-106 18-70 (82)
223 3f8u_A Protein disulfide-isome 90.1 0.38 1.3E-05 48.2 6.2 64 240-304 11-77 (481)
224 1sji_A Calsequestrin 2, calseq 90.1 0.24 8.2E-06 47.9 4.5 64 240-304 21-91 (350)
225 1b4f_A EPHB2; SAM domain, EPH 89.8 0.09 3.1E-06 41.6 1.0 51 55-106 13-65 (82)
226 3sei_A Caskin-1; SAM domain, p 89.6 0.12 3.9E-06 45.7 1.6 53 54-107 11-64 (149)
227 1kw4_A Polyhomeotic; SAM domai 89.6 0.098 3.4E-06 42.5 1.1 55 52-106 18-73 (89)
228 2qkq_A Ephrin type-B receptor 89.5 0.083 2.8E-06 42.0 0.6 51 55-106 17-69 (83)
229 1a0r_P Phosducin, MEKA, PP33; 89.5 0.26 9E-06 46.6 4.1 72 246-321 133-204 (245)
230 1ucv_A Ephrin type-A receptor 89.4 0.095 3.2E-06 41.6 0.9 51 55-106 9-61 (81)
231 2f3n_A SH3 and multiple ankyri 89.1 0.11 3.9E-06 40.5 1.1 52 54-106 8-60 (76)
232 2e8n_A Ephrin type-A receptor 88.9 0.14 4.8E-06 41.2 1.5 51 55-106 14-66 (88)
233 3h93_A Thiol:disulfide interch 88.8 0.31 1E-05 42.8 3.8 31 246-276 24-54 (192)
234 3hil_A Ephrin type-A receptor 88.4 0.12 4.3E-06 41.3 0.9 50 55-105 25-76 (82)
235 1v38_A SAM-domain protein sams 88.3 0.19 6.6E-06 39.6 1.9 44 5-48 14-57 (78)
236 3k1r_B Usher syndrome type-1G 88.1 0.13 4.5E-06 40.3 0.8 51 54-105 3-53 (74)
237 3apo_A DNAJ homolog subfamily 88.1 0.72 2.5E-05 49.4 6.8 66 246-313 675-740 (780)
238 3c1r_A Glutaredoxin-1; oxidize 88.0 0.18 6.3E-06 41.8 1.8 24 240-265 18-41 (118)
239 3t58_A Sulfhydryl oxidase 1; o 88.0 0.74 2.5E-05 48.0 6.7 67 245-311 28-98 (519)
240 3bq7_A Diacylglycerol kinase d 87.6 0.17 5.8E-06 40.0 1.2 52 54-106 13-65 (81)
241 1b0x_A Protein (EPHA4 receptor 87.6 0.14 4.9E-06 41.7 0.8 50 55-105 28-79 (94)
242 3uem_A Protein disulfide-isome 87.6 0.5 1.7E-05 45.4 4.8 65 246-312 266-331 (361)
243 1ego_A Glutaredoxin; electron 87.5 0.48 1.7E-05 35.5 3.7 35 251-287 3-37 (85)
244 2gle_A Neurabin-1; SAM domain, 87.4 0.14 4.7E-06 39.5 0.6 50 55-105 11-61 (74)
245 1v58_A Thiol:disulfide interch 87.2 0.46 1.6E-05 44.0 4.1 38 246-286 96-133 (241)
246 1h75_A Glutaredoxin-like prote 87.2 0.94 3.2E-05 33.8 5.2 32 251-289 3-34 (81)
247 2k8s_A Thioredoxin; dimer, str 87.0 0.45 1.6E-05 35.9 3.3 32 252-286 5-36 (80)
248 2rem_A Disulfide oxidoreductas 85.7 0.58 2E-05 40.7 3.7 40 246-286 24-63 (193)
249 1kte_A Thioltransferase; redox 85.6 0.51 1.7E-05 37.2 3.0 31 240-272 5-35 (105)
250 1r7h_A NRDH-redoxin; thioredox 85.3 1.5 5E-05 31.9 5.3 32 251-289 3-34 (75)
251 3dml_A Putative uncharacterize 85.2 0.48 1.6E-05 40.2 2.8 27 247-274 19-45 (116)
252 3hil_A Ephrin type-A receptor 85.0 0.54 1.8E-05 37.6 2.9 44 5-48 25-68 (82)
253 3iv4_A Putative oxidoreductase 85.0 0.51 1.7E-05 40.0 2.9 35 240-274 17-51 (112)
254 3h8m_A Ephrin type-A receptor 84.8 0.25 8.6E-06 40.2 0.9 51 55-106 27-79 (90)
255 3hz8_A Thiol:disulfide interch 84.6 0.79 2.7E-05 40.8 4.2 33 246-278 23-55 (193)
256 3apo_A DNAJ homolog subfamily 84.5 1.5 5.1E-05 46.9 6.9 69 240-311 450-518 (780)
257 2wci_A Glutaredoxin-4; redox-a 84.4 1.2 4.1E-05 38.3 5.1 32 240-272 28-63 (135)
258 3h8q_A Thioredoxin reductase 3 84.4 0.42 1.4E-05 39.2 2.1 31 240-272 10-40 (114)
259 3bs5_B Connector enhancer of k 84.2 0.36 1.2E-05 37.6 1.5 51 54-105 10-63 (80)
260 3rhb_A ATGRXC5, glutaredoxin-C 84.0 0.44 1.5E-05 38.5 2.0 30 240-271 12-41 (113)
261 3gx8_A Monothiol glutaredoxin- 83.9 0.57 2E-05 39.3 2.7 32 240-272 9-44 (121)
262 1z3e_A Regulatory protein SPX; 83.8 1.9 6.5E-05 36.5 6.1 64 251-322 3-71 (132)
263 1b4f_A EPHB2; SAM domain, EPH 83.7 0.52 1.8E-05 37.1 2.2 44 5-48 13-56 (82)
264 3evi_A Phosducin-like protein 83.6 1.1 3.8E-05 37.3 4.4 38 248-288 25-62 (118)
265 3feu_A Putative lipoprotein; a 83.5 0.43 1.5E-05 42.4 1.9 30 246-276 22-51 (185)
266 3ipz_A Monothiol glutaredoxin- 83.3 0.71 2.4E-05 37.7 3.1 32 240-272 11-46 (109)
267 3gv1_A Disulfide interchange p 83.3 1.1 3.8E-05 38.8 4.5 36 245-286 12-47 (147)
268 3ga4_A Dolichyl-diphosphooligo 83.1 2.6 8.8E-05 38.1 6.9 32 246-277 37-74 (178)
269 2wem_A Glutaredoxin-related pr 82.8 0.53 1.8E-05 39.6 2.1 35 237-272 10-48 (118)
270 3rdw_A Putative arsenate reduc 82.8 1.3 4.6E-05 37.2 4.6 64 251-322 7-76 (121)
271 3l78_A Regulatory protein SPX; 82.8 0.8 2.7E-05 38.4 3.2 64 251-322 2-70 (120)
272 1ucv_A Ephrin type-A receptor 82.7 0.62 2.1E-05 36.8 2.3 44 5-48 9-52 (81)
273 3zyw_A Glutaredoxin-3; metal b 82.5 0.8 2.7E-05 37.8 3.1 32 240-272 9-44 (111)
274 2cq9_A GLRX2 protein, glutared 82.3 0.37 1.3E-05 40.5 1.0 30 240-271 20-49 (130)
275 2dlx_A UBX domain-containing p 81.9 2.4 8.2E-05 37.1 6.1 65 246-312 42-111 (153)
276 3kka_C Ephrin type-A receptor 81.8 0.55 1.9E-05 37.9 1.7 44 5-48 23-66 (86)
277 2znm_A Thiol:disulfide interch 81.7 0.43 1.5E-05 41.7 1.2 31 246-276 21-51 (195)
278 1fov_A Glutaredoxin 3, GRX3; a 81.6 2.1 7.3E-05 31.6 4.9 20 252-271 4-23 (82)
279 2eao_A Ephrin type-B receptor 81.5 0.41 1.4E-05 39.3 0.9 51 55-106 24-76 (99)
280 3h8m_A Ephrin type-A receptor 81.4 0.57 1.9E-05 38.1 1.7 44 5-48 27-70 (90)
281 1v85_A Similar to ring finger 81.2 0.51 1.7E-05 38.1 1.3 57 50-106 19-79 (91)
282 2e8n_A Ephrin type-A receptor 81.1 0.67 2.3E-05 37.1 2.0 44 5-48 14-57 (88)
283 3kka_C Ephrin type-A receptor 80.8 0.54 1.8E-05 37.9 1.4 52 54-106 22-75 (86)
284 1hyu_A AHPF, alkyl hydroperoxi 80.6 2.3 8E-05 43.6 6.4 58 246-305 116-173 (521)
285 3gkx_A Putative ARSC family re 80.4 0.99 3.4E-05 38.0 3.0 64 251-322 6-74 (120)
286 2kg5_A ARF-GAP, RHO-GAP domain 80.2 0.58 2E-05 38.8 1.4 53 54-107 27-81 (100)
287 2ht9_A Glutaredoxin-2; thiored 79.9 0.49 1.7E-05 41.0 0.9 30 240-271 42-71 (146)
288 2khp_A Glutaredoxin; thioredox 79.5 2.9 0.0001 31.9 5.2 21 251-271 8-28 (92)
289 2klx_A Glutaredoxin; thioredox 79.4 0.95 3.3E-05 34.7 2.3 21 251-271 8-28 (89)
290 4dvc_A Thiol:disulfide interch 79.3 1.7 5.8E-05 37.0 4.1 39 246-286 21-59 (184)
291 2ywm_A Glutaredoxin-like prote 79.1 3.1 0.0001 37.0 6.0 45 246-290 20-69 (229)
292 2fgx_A Putative thioredoxin; N 79.1 1.3 4.6E-05 36.8 3.3 35 250-287 31-65 (107)
293 1b0x_A Protein (EPHA4 receptor 79.0 0.97 3.3E-05 36.7 2.3 44 5-48 28-71 (94)
294 1un2_A DSBA, thiol-disulfide i 78.9 0.98 3.3E-05 40.9 2.6 39 246-286 113-154 (197)
295 3f0i_A Arsenate reductase; str 78.5 1.8 6E-05 36.4 3.9 64 251-322 6-75 (119)
296 3msz_A Glutaredoxin 1; alpha-b 77.4 1.4 4.6E-05 33.2 2.6 21 251-271 6-26 (89)
297 3ctg_A Glutaredoxin-2; reduced 77.1 0.67 2.3E-05 39.2 0.9 30 240-271 30-60 (129)
298 3fz4_A Putative arsenate reduc 77.0 1.6 5.6E-05 36.7 3.3 65 250-322 4-73 (120)
299 3bs5_A Protein aveugle; sterIl 76.7 0.95 3.2E-05 37.7 1.7 54 52-106 27-83 (106)
300 2ean_A Connector enhancer of k 76.6 0.96 3.3E-05 35.5 1.6 50 55-105 15-67 (83)
301 1pk1_B Sex COMB on midleg CG94 76.5 0.88 3E-05 36.9 1.4 53 54-106 20-74 (89)
302 2k6l_A Putative uncharacterize 76.4 0.48 1.6E-05 35.1 -0.2 19 89-107 21-39 (51)
303 2qkq_A Ephrin type-B receptor 76.3 1.2 4.1E-05 35.2 2.1 43 5-47 17-59 (83)
304 1x40_A ARAP2; ASAP-related pro 76.1 0.55 1.9E-05 38.1 0.0 51 55-106 17-69 (91)
305 3us3_A Calsequestrin-1; calciu 76.1 3.6 0.00012 40.2 6.0 64 241-304 24-93 (367)
306 2k4p_A Phosphatidylinositol-3, 76.0 0.67 2.3E-05 37.4 0.6 50 55-105 28-79 (86)
307 2dl0_A SAM and SH3 domain-cont 75.8 1.7 5.9E-05 35.7 3.0 44 5-48 25-68 (97)
308 3bs7_A Protein aveugle; sterIl 75.8 0.96 3.3E-05 35.0 1.4 51 55-106 10-63 (78)
309 2kso_A Ephrin type-A receptor 75.6 1.1 3.7E-05 35.7 1.6 44 5-48 18-61 (82)
310 2eam_A Putative 47 kDa protein 75.0 0.65 2.2E-05 36.4 0.2 51 55-106 14-68 (80)
311 1pn0_A Phenol 2-monooxygenase; 74.6 29 0.00099 36.8 12.9 127 234-404 495-648 (665)
312 3nzn_A Glutaredoxin; structura 74.5 1.5 5.3E-05 34.8 2.4 22 251-272 24-45 (103)
313 2k4p_A Phosphatidylinositol-3, 74.4 1.5 5.1E-05 35.4 2.2 46 3-48 26-71 (86)
314 1s3c_A Arsenate reductase; ARS 73.8 1.4 4.8E-05 38.2 2.1 65 251-323 4-73 (141)
315 1ttz_A Conserved hypothetical 73.7 1.3 4.4E-05 35.1 1.7 22 251-272 3-24 (87)
316 3l4n_A Monothiol glutaredoxin- 73.2 2.1 7E-05 36.4 2.9 31 240-272 7-37 (127)
317 1t1v_A SH3BGRL3, SH3 domain-bi 73.1 6.3 0.00021 30.6 5.6 31 251-287 4-39 (93)
318 2kiv_A Ankyrin repeat and ster 72.8 0.87 3E-05 39.8 0.5 51 55-106 16-70 (148)
319 2qgv_A Hydrogenase-1 operon pr 72.1 2.8 9.4E-05 36.7 3.5 42 245-287 33-76 (140)
320 3gn3_A Putative protein-disulf 72.0 2.1 7.1E-05 38.2 2.8 43 244-286 11-53 (182)
321 3ic4_A Glutaredoxin (GRX-1); s 71.8 1.5 5.1E-05 33.6 1.6 22 251-272 14-35 (92)
322 3qmx_A Glutaredoxin A, glutare 71.1 1.5 5.3E-05 35.2 1.6 22 251-272 18-39 (99)
323 3bci_A Disulfide bond protein 71.0 3.3 0.00011 35.9 3.9 41 246-286 10-52 (186)
324 2kok_A Arsenate reductase; bru 70.5 2.7 9.3E-05 34.9 3.0 63 251-322 7-73 (120)
325 2hze_A Glutaredoxin-1; thiored 70.2 2.2 7.6E-05 34.5 2.4 29 241-271 13-41 (114)
326 2dl0_A SAM and SH3 domain-cont 69.8 0.92 3.1E-05 37.3 -0.1 51 55-106 25-77 (97)
327 3k1r_B Usher syndrome type-1G 67.8 3.1 0.00011 32.4 2.6 59 5-64 4-67 (74)
328 2lqo_A Putative glutaredoxin R 67.8 2.4 8.1E-05 34.1 2.0 21 251-271 6-26 (92)
329 2eao_A Ephrin type-B receptor 67.5 2.3 7.9E-05 34.7 1.9 44 5-48 24-67 (99)
330 2kg5_A ARF-GAP, RHO-GAP domain 66.1 2.9 0.0001 34.5 2.3 45 4-48 27-71 (100)
331 2av4_A Thioredoxin-like protei 64.9 7.8 0.00027 34.8 5.0 41 246-288 41-81 (160)
332 1aba_A Glutaredoxin; electron 64.2 4.1 0.00014 31.2 2.7 20 252-271 3-26 (87)
333 2ke7_A Ankyrin repeat and ster 63.2 1.3 4.5E-05 36.5 -0.4 53 53-106 22-78 (103)
334 1v38_A SAM-domain protein sams 63.0 2.4 8.1E-05 33.3 1.1 50 55-105 14-65 (78)
335 2wul_A Glutaredoxin related pr 62.3 3.5 0.00012 35.0 2.1 32 239-271 12-47 (118)
336 2e8o_A SAM domain and HD domai 62.3 1.4 5E-05 36.2 -0.3 55 50-105 29-86 (103)
337 3c7m_A Thiol:disulfide interch 60.8 7.3 0.00025 33.4 4.0 39 247-287 18-57 (195)
338 2ct6_A SH3 domain-binding glut 60.5 8.6 0.00029 31.2 4.2 31 251-287 10-45 (111)
339 3uem_A Protein disulfide-isome 59.3 24 0.00082 33.5 7.7 41 248-289 136-176 (361)
340 3ihg_A RDME; flavoenzyme, anth 59.2 19 0.00064 36.5 7.3 83 234-381 434-516 (535)
341 2qsi_A Putative hydrogenase ex 59.2 15 0.00053 31.7 5.8 29 249-277 35-65 (137)
342 2lmr_A ODIN, ankyrin repeat an 57.7 6.4 0.00022 32.6 2.9 44 5-48 31-76 (101)
343 2d8c_A Phosphatidylcholine:cer 57.7 2.4 8.1E-05 34.9 0.3 52 53-106 22-75 (97)
344 2eam_A Putative 47 kDa protein 56.9 7 0.00024 30.4 2.9 43 5-47 14-58 (80)
345 3gha_A Disulfide bond formatio 56.2 8.4 0.00029 34.5 3.7 25 245-269 27-51 (202)
346 2hls_A Protein disulfide oxido 55.3 20 0.00069 32.8 6.2 34 240-273 17-53 (243)
347 3tdg_A DSBG, putative uncharac 53.0 6.9 0.00024 37.9 2.7 38 246-286 146-183 (273)
348 1rw1_A Conserved hypothetical 51.5 8.2 0.00028 31.6 2.6 63 251-322 2-68 (114)
349 2lmr_A ODIN, ankyrin repeat an 49.8 3 0.0001 34.5 -0.3 51 55-106 31-85 (101)
350 3gmf_A Protein-disulfide isome 49.2 13 0.00043 33.7 3.7 27 245-271 13-39 (205)
351 2ec4_A FAS-associated factor 1 47.2 18 0.00062 32.3 4.4 46 245-291 53-101 (178)
352 3f4s_A Alpha-DSBA1, putative u 46.0 15 0.00052 33.7 3.8 42 245-286 37-80 (226)
353 3tad_C Liprin-beta-1; protein 45.4 6.1 0.00021 38.2 1.0 55 50-104 17-72 (265)
354 3l9s_A Thiol:disulfide interch 43.3 7.7 0.00026 34.4 1.3 38 247-286 22-62 (191)
355 2in3_A Hypothetical protein; D 42.3 21 0.00072 31.2 4.0 39 248-287 7-45 (216)
356 2ke7_A Ankyrin repeat and ster 39.2 12 0.0004 30.7 1.6 43 5-47 24-68 (103)
357 1wwv_A Connector enhancer of k 38.5 18 0.00061 29.2 2.6 49 55-106 18-69 (91)
358 2axo_A Hypothetical protein AT 36.2 19 0.00065 34.7 2.8 28 246-273 40-68 (270)
359 2dkh_A 3-hydroxybenzoate hydro 34.6 1.9E+02 0.0064 30.2 10.4 30 363-399 606-635 (639)
360 1nm3_A Protein HI0572; hybrid, 33.0 15 0.00052 33.1 1.5 21 251-271 172-192 (241)
361 2y9t_A Tumor protein 63; apopt 32.2 43 0.0015 26.7 3.9 45 5-49 8-52 (82)
362 2jad_A Yellow fluorescent prot 31.3 27 0.00091 35.1 3.1 28 240-269 254-281 (362)
363 2djk_A PDI, protein disulfide- 30.6 98 0.0033 25.0 6.0 62 246-310 23-86 (133)
364 1r4w_A Glutathione S-transfera 29.8 38 0.0013 30.3 3.6 36 248-286 5-40 (226)
365 1xhj_A Nitrogen fixation prote 28.6 49 0.0017 26.7 3.7 48 227-276 19-73 (88)
366 2y9u_A Tumor protein 63; apopt 27.6 41 0.0014 25.9 2.9 45 5-49 6-50 (69)
367 1sen_A Thioredoxin-like protei 27.3 38 0.0013 28.8 3.0 42 362-404 104-150 (164)
368 1ic9_A TH10AOX; three stranded 26.7 18 0.00063 23.2 0.6 9 253-261 11-19 (29)
369 4f9z_D Endoplasmic reticulum r 26.4 98 0.0033 27.5 5.7 49 240-289 123-172 (227)
370 2imf_A HCCA isomerase, 2-hydro 25.8 42 0.0014 29.4 3.1 33 251-286 3-35 (203)
371 3tac_B Liprin-alpha-2; transfe 25.4 31 0.0011 34.4 2.3 61 36-96 123-206 (334)
372 3kp9_A Vkorc1/thioredoxin doma 24.9 31 0.0011 33.3 2.2 38 237-276 189-226 (291)
373 3f9u_A Putative exported cytoc 24.5 40 0.0014 28.3 2.6 36 362-402 131-166 (172)
374 3kzq_A Putative uncharacterize 23.3 53 0.0018 28.8 3.3 37 250-287 4-40 (208)
375 3gl5_A Putative DSBA oxidoredu 22.1 49 0.0017 30.3 2.9 40 247-286 1-41 (239)
376 1ku3_A Sigma factor SIGA; heli 20.5 55 0.0019 24.0 2.4 28 45-72 10-40 (73)
No 1
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.93 E-value=2.1e-26 Score=204.99 Aligned_cols=155 Identities=19% Similarity=0.185 Sum_probs=133.7
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~-~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.++|++||.|.|++. +|++|+|+++.. ++++||+|||..|||.|+.++..|++.+++|++
T Consensus 5 l~vG~~aPdF~l~~~-------------------~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~ 65 (164)
T 4gqc_A 5 VELGEKAPDFTLPNQ-------------------DFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK 65 (164)
T ss_dssp CCTTSBCCCCEEEBT-------------------TSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG
T ss_pred ccCCCCCcCcEeECC-------------------CCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc
Confidence 578999998877665 599999999874 578999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCC
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKG 357 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~G 357 (416)
.|+.+|+|+.++++. ++.|.+ +.++|++++|++.+++++||+.. .. . .+ .
T Consensus 66 ~~v~vv~is~d~~~~-~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~----~~-----~-------------~~------~ 116 (164)
T 4gqc_A 66 ANAEVLAISVDSPWC-LKKFKDENRLAFNLLSDYNREVIKLYNVYH----ED-----L-------------KG------L 116 (164)
T ss_dssp SSSEEEEEESSCHHH-HHHHHHHTTCCSEEEECTTSHHHHHTTCEE----EE-----E-------------TT------E
T ss_pred cCceEEEecCCCHHH-HHHHHHhcCcccceeecCchHHHHHcCCcc----cc-----c-------------cc------C
Confidence 999999999999875 788885 88999999999999999999841 00 0 00 0
Q ss_pred CCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 358 EGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 358 D~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
.+...|++||||++| +|+|.|+..++.++++++++|++++++..+
T Consensus 117 ~~~~~p~tflID~~G-~I~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 117 KMVAKRAVFIVKPDG-TVAYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp EEEECCEEEEECTTS-BEEEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCeeeEEEEECCCC-EEEEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 123568999999997 999999999999999999999999998755
No 2
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.93 E-value=3.5e-25 Score=194.94 Aligned_cols=153 Identities=15% Similarity=0.180 Sum_probs=127.1
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.+++|++||.|.|++. +|++|+|+++ +++++||.|++..|||.|+.++..|++.++++++
T Consensus 3 ~l~vG~~aPdF~l~~~-------------------~G~~~~l~d~-~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~ 62 (157)
T 4g2e_A 3 MVEIGELAPDFELPDT-------------------ELKKVKLSAL-KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ 62 (157)
T ss_dssp CCCTTSBCCCCEEEBT-------------------TSCEEEGGGG-TTSCEEEEECSCTTCCC------CCSCGGGGGGG
T ss_pred cCCCCCCCcCeEeECC-------------------CCCEEeHHHH-CCCeEEEEecCCCCCCccccchhhcccccccccc
Confidence 5689999997777665 5999999996 7789999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCC
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKG 357 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~G 357 (416)
.|+.+|+|+.++++. ++.|.+ +.++|++++|++++++++||+.. . . + + ..|
T Consensus 63 ~~~~~v~vs~d~~~~-~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~----~------~-~------------~----~~~ 114 (157)
T 4g2e_A 63 VNAVVLGISVDPPFS-NKAFKEHNKLNFTILSDYNREVVKKYNVAW----E------F-P------------A----LPG 114 (157)
T ss_dssp CSSEEEEEESSCHHH-HHHHHHHTTCCSEEEECTTSHHHHHTTCEE----E------C-T------------T----STT
T ss_pred cCceEeeecccchhH-HHHHHHHcCCcEEEEEcCCcHHHHHcCCcc----c------c-c------------c----CCC
Confidence 999999999998875 788885 88999999999999999999852 0 0 0 1 123
Q ss_pred CCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 358 EGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 358 D~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
.....|++||||++| +|+|.|+..++.+++++++|++++++|
T Consensus 115 ~~~~~p~tflID~~G-~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 115 YVLAKRAVFVIDKEG-KVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp CEEECEEEEEECTTS-BEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cceeeeeEEEECCCC-EEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 345679999999997 999999999999999999999999876
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.87 E-value=7.1e-22 Score=178.80 Aligned_cols=154 Identities=13% Similarity=0.041 Sum_probs=124.9
Q ss_pred CCCCCCCCCCCccccc-cccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccc
Q 014901 197 QAPPVNEKVAPYSAIE-NISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKP 274 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~-d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn-~el~~Ls~~~p 274 (416)
.+++.+|+++|.|.|+ +. +|++|+|+++++++++||+||+..|||.|+ .|+..|++.++
T Consensus 12 ~~~~~vG~~aPdf~l~~~~-------------------~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~ 72 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVFEGE-------------------PGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAE 72 (173)
T ss_dssp -CCCCTTCBCCCCEEECSS-------------------TTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHH
T ss_pred CCCCCCCCCCCCeEeeeCC-------------------CCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHH
Confidence 4678999999988776 44 499999999889999999999999999999 59999999999
Q ss_pred hhhhcCCeEEE-EecCChhhHHhhhcC-CCCC--ceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 014901 275 IFDALGIQLFA-VLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 350 (416)
Q Consensus 275 eL~alGV~LVa-IspEs~~~~ik~F~~-~~l~--f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G 350 (416)
+|++.|+.+|+ |+.+++.. .+.|.+ ..++ |++++|++.++.++||+.. ..... ..
T Consensus 73 ~~~~~gv~vv~~iS~D~~~~-~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~------------~~~~~----~~---- 131 (173)
T 3mng_A 73 ALKAKGVQVVACLSVNDAFV-TGEWGRAHKAEGKVRLLADPTGAFGKETDLLL------------DDSLV----SI---- 131 (173)
T ss_dssp HHHTTTCCEEEEEESSCHHH-HHHHHHHTTCTTTCEEEECTTCHHHHHHTCBC------------CSTTH----HH----
T ss_pred HHHhCCCEEEEEEcCCCHHH-HHHHHHHhCCCCceEEEECCChHHHHHhCCCc------------ccccc----cc----
Confidence 99999999997 99998875 788885 6777 9999999999999999952 00000 00
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCC--CCCCHHHHHHHH
Q 014901 351 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG--DWAPLAEVIEIC 397 (416)
Q Consensus 351 ~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~g--Drad~~eVLaAl 397 (416)
.|.....|++|||| +| +|+|.|++.+.. +..+.++||++|
T Consensus 132 -----~g~~~~~r~tfvID-dG-~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 132 -----FGNRRLKRFSMVVQ-DG-IVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp -----HSSCCBCCEEEEEE-TT-EEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred -----cCCcceEEEEEEEE-CC-EEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 02234579999999 86 999999999864 567777777653
No 4
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.1e-22 Score=185.94 Aligned_cols=165 Identities=16% Similarity=0.072 Sum_probs=134.8
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
++++|++||.|.++.. ++.+|++|+|+++ +++++||+||+..|||.|..|+.+|++.+++|++
T Consensus 22 ~~~VG~~APdF~l~a~----------------~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~ 84 (216)
T 3sbc_A 22 VAQVQKQAPTFKKTAV----------------VDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE 84 (216)
T ss_dssp CCCTTSBCCCCCEEEE----------------ETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCcCCCCCCcce----------------ECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc
Confidence 3688999998877543 1335789999995 7789999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC--------CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 350 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~--------~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G 350 (416)
+|+.+|+||.+++.. .+.|.. ..++|++++|+++++.++||+-. +
T Consensus 85 ~g~~vigiS~Ds~~s-h~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~-------------~------------- 137 (216)
T 3sbc_A 85 QGAQVLFASTDSEYS-LLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLI-------------E------------- 137 (216)
T ss_dssp TTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEE-------------T-------------
T ss_pred CCceEEEeecCchhh-HHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCee-------------c-------------
Confidence 999999999999875 677763 14899999999999999999831 1
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh----------ccccccccccc
Q 014901 351 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ----------RDQSETIKTSQ 415 (416)
Q Consensus 351 ~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~----------~~~~~~~~~~~ 415 (416)
.++...+|+||||++| +|+|..+...... .+++|+|++++++|-.. ++|.++|+.+.
T Consensus 138 ------~~g~~~R~tFiID~~G-~Ir~~~v~~~~~g-rn~dEiLr~l~AlQ~~~~~~~~~Pa~W~~G~~~i~p~~ 204 (216)
T 3sbc_A 138 ------EEGVALRGLFIIDPKG-VIRHITINDLPVG-RNVDEALRLVEAFQWTDKNGTVLPCNWTPGAATIKPTV 204 (216)
T ss_dssp ------TTTEECEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHHHHHCCBBCTTCCTTSCCBCCST
T ss_pred ------cCCceeeEEEEECCCC-eEEEEEEcCCCCC-CCHHHHHHHHHHhhhHhhcCCCcCCCCCCCCceecCCH
Confidence 1134468999999996 9999998775543 48899999999987221 67778887653
No 5
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.86 E-value=3.5e-21 Score=182.71 Aligned_cols=153 Identities=11% Similarity=0.111 Sum_probs=129.2
Q ss_pred CCCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchH-----HHHHHHH
Q 014901 196 IQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCR-----AEAHQLY 270 (416)
Q Consensus 196 ~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn-----~el~~Ls 270 (416)
....+++|+.+|.|.|++. +|++|+|++ ++++++||+||+..|||.|+ .++..|+
T Consensus 18 ~g~~l~vG~~APdFtL~d~-------------------~G~~vsLsd-~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~ 77 (224)
T 3keb_A 18 IGDFPRKGDYLPSFMLVDD-------------------QKHDAALES-FSHTPKLIVTLLSVDEDEHAGLLLLRETRRFL 77 (224)
T ss_dssp BSCCCCTTCBCCCCEEEET-------------------TSCEEEGGG-GTTCCEEEEECSCTTCSTTTSHHHHHHHHHHH
T ss_pred ecCcCCCCCCCCCeEEECC-------------------CCCEEeHHH-hCCCcEEEEEEeCCCCCCCCCCccHHHHHHHH
Confidence 3456789999997777655 499999999 57889999999999999999 9999999
Q ss_pred hccchhhhcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 014901 271 AKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 347 (416)
Q Consensus 271 ~~~peL~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp-~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~ 347 (416)
+. + .|+.+|+||.+++.. ++.|.+ +.+ +|++++|+ +..+.++||+.. . ..|
T Consensus 78 ~~---~--~gv~VvgIS~Ds~~~-~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~----~------~~~---------- 131 (224)
T 3keb_A 78 DS---W--PHLKLIVITVDSPSS-LARARHEHGLPNIALLSTLRGRDFHKRYGVLI----T------EYP---------- 131 (224)
T ss_dssp TT---C--TTSEEEEEESSCHHH-HHHHHHHHCCTTCEEEESTTCTTHHHHTTCBC----C------STT----------
T ss_pred HH---c--CCCEEEEEECCCHHH-HHHHHHHcCCCCceEEEcCCchHHHHHhCCcc----c------ccc----------
Confidence 88 4 799999999999875 788885 677 69999999 699999999951 0 000
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 348 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 348 ~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
+ .++..|++||||++| +|+|.++..++.++++++++|++++.+..+.
T Consensus 132 -------~--~G~~~p~tfvID~dG-~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~ 178 (224)
T 3keb_A 132 -------L--SGYTSPAIILADAAN-VVHYSERLANTRDFFDFDAIEKLLQEGEQQA 178 (224)
T ss_dssp -------S--TTCBCCEEEEECTTC-BEEEEEECSBTTCCCCHHHHHHHHHHHHHHC
T ss_pred -------c--cCCccCEEEEEcCCC-EEEEEEecCCCCCCCCHHHHHHHHHHhhhcc
Confidence 0 124579999999997 9999999999999999999999999987655
No 6
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.86 E-value=1.7e-21 Score=184.49 Aligned_cols=166 Identities=12% Similarity=0.079 Sum_probs=126.2
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
....++|++||.|.++.+ +. +.+|+.|+|+++ +++++||+||+..|||.|..|+++|++.+++|
T Consensus 23 ~~~~~vG~~APdF~~~a~-l~--------------d~~g~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF 86 (219)
T 3tue_A 23 CGNAKINSPAPSFEEVAL-MP--------------NGSFKKISLSSY-KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRF 86 (219)
T ss_dssp -CCCCTTSBCCCCEEEEE-CT--------------TSCEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHH
T ss_pred ccccccCCcCCCCccccc-cc--------------CCCCcEEehHHh-CCCEEEEEEecccCCCCCchhHhhHHHHHhhh
Confidence 344589999998875432 11 335889999995 67899999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC--------CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 348 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~--------~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~ 348 (416)
+++|+.||+||.++... .+.|.. ..++|++++|+++++.++||+-. +
T Consensus 87 ~~~g~~vigiS~Ds~~s-h~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~-------------~----------- 141 (219)
T 3tue_A 87 NELNCEVLACSIDSEYA-HLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLE-------------E----------- 141 (219)
T ss_dssp HTTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE-------------T-----------
T ss_pred ccCCcEEEEeeCCchhh-HHHHhhhhHHhcCccccccccccCcccHHHHHcCCcc-------------c-----------
Confidence 99999999999999875 677753 25899999999999999999831 0
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh----------ccccccccc
Q 014901 349 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ----------RDQSETIKT 413 (416)
Q Consensus 349 ~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~----------~~~~~~~~~ 413 (416)
.++....|+||||++| +|+|.++......| +++|||++++++|-.. ++|.++|+.
T Consensus 142 --------~~g~~~R~tFiIDp~g-~Ir~~~~~~~~~gr-~~~EvLr~l~aLQ~~~~~~~~~Pa~W~~G~~~i~p 206 (219)
T 3tue_A 142 --------SQGVAYRGLFIIDPHG-MLRQITVNDMPVGR-SVEEVLRLLEAFQFVEKHGEVCPANWKKGDPGMKP 206 (219)
T ss_dssp --------TTTEECEEEEEECTTS-BEEEEEEECTTCCC-CHHHHHHHHHHHHHHHHC-----------------
T ss_pred --------CCCeeEEEEEEECCCC-eEEEEEEecCCCCC-CHHHHHHHHHHhhhHHhcCCCcCCCCCCCCccccC
Confidence 0123456999999996 99999976544333 7799999999987322 667777764
No 7
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.85 E-value=8.8e-21 Score=166.73 Aligned_cols=147 Identities=7% Similarity=0.086 Sum_probs=126.6
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+.+|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|++++.+
T Consensus 17 ~~~l~~G~~aP~f~l~~~-------------------~G~~~~l~~~-~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~- 75 (166)
T 3p7x_A 17 GQQINEGDFAPDFTVLDN-------------------DLNQVTLADY-AGKKKLISVVPSIDTGVCDQQTRKFNSDASK- 75 (166)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-
T ss_pred cccCCCCCCCCCeEEEcC-------------------CCCEEeHHHh-CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-
Confidence 456788999997777655 4999999996 7789999999999999999999999999888
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp-~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
.|+.+|+|+.++++. ++.|.+ .++ +|++++|+ +..++++||+.. . .
T Consensus 76 --~~~~vv~is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~-----------~-~---------------- 124 (166)
T 3p7x_A 76 --EEGIVLTISADLPFA-QKRWCASAGLDNVITLSDHRDLSFGENYGVVM-----------E-E---------------- 124 (166)
T ss_dssp --TTSEEEEEESSCHHH-HHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE-----------T-T----------------
T ss_pred --CCCEEEEEECCCHHH-HHHHHHHcCCCceEEccCCchhHHHHHhCCcc-----------c-c----------------
Confidence 799999999998875 788885 678 89999999 999999999841 0 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
.+...|.+||||++| +|+|.|+..+..+++++++++++++++
T Consensus 125 ----~g~~~p~~~liD~~G-~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 125 ----LRLLARAVFVLDADN-KVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp ----TTEECCEEEEECTTC-BEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ----CCceeeEEEEECCCC-eEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 123468999999997 999999999999999999999999764
No 8
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.85 E-value=3.8e-21 Score=175.62 Aligned_cols=152 Identities=14% Similarity=0.052 Sum_probs=125.2
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCC-CceechhhccCCCEEEEeecCCCCcchHH-HHHHHHhccchh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT-PPMKALELWRESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIF 276 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G-~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~-el~~Ls~~~peL 276 (416)
++++|+.+|.|.|++.. .+| ++|+|+++++++++||+||+..|||.|+. |+..|++++++|
T Consensus 25 ~l~vG~~aPdf~l~~~~-----------------~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~ 87 (184)
T 3uma_A 25 TIAVGDKLPNATFKEKT-----------------ADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAI 87 (184)
T ss_dssp CCCTTCBCCCCEEEEEE-----------------TTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHH
T ss_pred cCCCCCCCCCcEeeccc-----------------CCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHH
Confidence 47899999977776651 138 89999998888899999999999999999 899999999999
Q ss_pred hhcCCe-EEEEecCChhhHHhhhcC-CCCC--ceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCc
Q 014901 277 DALGIQ-LFAVLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVE 352 (416)
Q Consensus 277 ~alGV~-LVaIspEs~~~~ik~F~~-~~l~--f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~ 352 (416)
++.|+. +|+|+.+++.. .+.|.+ ..++ |++++|++.++.++||+... +.. .|+.
T Consensus 88 ~~~gv~~vv~Is~d~~~~-~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~------------~~~---------~g~g 145 (184)
T 3uma_A 88 LARGVDDIAVVAVNDLHV-MGAWATHSGGMGKIHFLSDWNAAFTKAIGMEID------------LSA---------GTLG 145 (184)
T ss_dssp HTTTCCEEEEEESSCHHH-HHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEE------------EGG---------GTCE
T ss_pred HHcCCCEEEEEECCCHHH-HHHHHHHhCCCCceEEEEcCchHHHHHcCCcee------------ccc---------cCCc
Confidence 999999 99999998875 788885 6788 99999999999999999520 110 1110
Q ss_pred cccCCCCcccceEEEEecCCCcEEEEEecCCCCC--CCCHHHHHHHH
Q 014901 353 QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--WAPLAEVIEIC 397 (416)
Q Consensus 353 gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gD--rad~~eVLaAl 397 (416)
....|++|||+ +| +|+|.|++.+.++ +.+.++||+.|
T Consensus 146 ------~~~~r~tfiId-dG-~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 146 ------IRSKRYSMLVE-DG-VVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp ------EEECCEEEEEE-TT-EEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred ------ccceeEEEEEC-CC-EEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 12458999997 75 9999999998755 88999999864
No 9
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.84 E-value=7.7e-21 Score=174.46 Aligned_cols=161 Identities=11% Similarity=0.059 Sum_probs=123.8
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCC----CceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccch
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT----PPMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKPI 275 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G----~~VsLsdL~~~~pvVLvFyRg~gCP~Cn-~el~~Ls~~~pe 275 (416)
++|+++|.|.|++..- + ..+.+-..+| +.|+++++++++++||+||++.|||.|+ .|+++|++.+++
T Consensus 2 ~vGd~aPdf~l~~~~~-~-------~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~ 73 (182)
T 1xiy_A 2 KENDLIPNVKVMIDVR-N-------MNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDY 73 (182)
T ss_dssp CTTCBCCCCEEEEEHH-H-------HTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCCCCCCCeEEEcccc-c-------ccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 5789999888776300 0 0000001136 7999999889999999999999999999 999999999999
Q ss_pred h-hhcCCe-EEEEecCChhhHHhhhcC-CCC-CceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 276 F-DALGIQ-LFAVLHEYIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 276 L-~alGV~-LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
| +++|+. +++||.+++.. ++.|.+ ..+ +|++++|+++++.++||+.. . . +. .|+
T Consensus 74 f~~~~g~~~V~gvS~D~~~~-~~~~~~~~~~~~f~lLsD~~~~~a~~yGv~~----~------~-~~----------~G~ 131 (182)
T 1xiy_A 74 FIKENNFDDIYCITNNDIYV-LKSWFKSMDIKKIKYISDGNSSFTDSMNMLV----D------K-SN----------FFM 131 (182)
T ss_dssp HHTTSCCSEEEEEESSCHHH-HHHHHHHTTCCSSEEEECTTSHHHHHTTCEE----E------C-GG----------GTC
T ss_pred HHHhCCCcEEEEEeCCCHHH-HHHHHHHcCCCCceEEEeCchHHHHHhCCce----e------c-cc----------cCC
Confidence 9 999996 99999999875 788885 667 69999999999999999941 0 0 00 111
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCC--------CCCHHHHHHHHHh
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--------WAPLAEVIEICTQ 399 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gD--------rad~~eVLaAlk~ 399 (416)
| .....++|||| +| +|+|.+++.++++ +.++++||++|++
T Consensus 132 -----g-~~~~R~tfvId-dG-~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 132 -----G-MRPWRFVAIVE-NN-ILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp -----C-EEECCEEEEEE-TT-EEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred -----C-CceEEEEEEEc-CC-EEEEEEEeCCcccccccCcccCCCHHHHHHHHHh
Confidence 1 12346899999 85 9999999998765 7899999999874
No 10
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.84 E-value=5.8e-21 Score=168.15 Aligned_cols=150 Identities=12% Similarity=0.101 Sum_probs=121.8
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccchh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKPIF 276 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn-~el~~Ls~~~peL 276 (416)
+++|+.+|.|.++.. +.+| ++++++++++++++||.|++..|||.|+ .++.+|++++++|
T Consensus 4 ~~~G~~aP~f~l~~~-----------------~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~ 66 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYF-----------------DEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGEL 66 (162)
T ss_dssp CCTTCBCCCCEEEEE-----------------CTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCCCCCeEEEee-----------------cCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHH
Confidence 568888997665421 1248 9999999778899999999999999999 8999999999999
Q ss_pred hhcCCe-EEEEecCChhhHHhhhcC-CCC--CceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCc
Q 014901 277 DALGIQ-LFAVLHEYIESEVKDFWP-RYW--GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVE 352 (416)
Q Consensus 277 ~alGV~-LVaIspEs~~~~ik~F~~-~~l--~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~ 352 (416)
++.|++ +|+|+.++++. ++.|.+ +.+ +|++++|++.+++++||+.. . ..+ .|+
T Consensus 67 ~~~~v~~vv~Is~d~~~~-~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~----~------~~~-----------~g~- 123 (162)
T 1tp9_A 67 KSKGVTEILCISVNDPFV-MKAWAKSYPENKHVKFLADGSATYTHALGLEL----D------LQE-----------KGL- 123 (162)
T ss_dssp HHTTCCCEEEEESSCHHH-HHHHHHTCTTCSSEEEEECTTSHHHHHTTCEE----E------ETT-----------TTS-
T ss_pred HHCCCCEEEEEECCCHHH-HHHHHHhcCCCCCeEEEECCCchHHHHcCccc----c------ccc-----------CCC-
Confidence 999999 99999998774 788875 667 89999999999999999851 0 000 011
Q ss_pred cccCCCCcccceEEEEecCCCcEEEEEecCCCCCCC--CHHHHHHHH
Q 014901 353 QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWA--PLAEVIEIC 397 (416)
Q Consensus 353 gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDra--d~~eVLaAl 397 (416)
.....|++|||| +| +|+|.|++. +++++ ++++||++|
T Consensus 124 -----~~~~~p~~~vid-~G-~i~~~~~~~-~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 124 -----GTRSRRFALLVD-DL-KVKAANIEG-GGEFTVSSAEDILKDL 162 (162)
T ss_dssp -----EEEECCEEEEEE-TT-EEEEEEECS-SSCCSSCSHHHHHTTC
T ss_pred -----CccceeEEEEEE-CC-EEEEEEeeC-CCCCccCCHHHHHhhC
Confidence 013478999999 86 999999998 88876 899998753
No 11
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.84 E-value=3.2e-20 Score=162.65 Aligned_cols=148 Identities=9% Similarity=0.033 Sum_probs=125.2
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+.+|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|+++++++
T Consensus 13 ~~~~~~G~~~P~f~l~~~-------------------~G~~v~l~~~-~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~ 72 (163)
T 1psq_A 13 GKQLQVGDKALDFSLTTT-------------------DLSKKSLADF-DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred cCCCCCCCCCCCEEEEcC-------------------CCcEeeHHHh-CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc
Confidence 345678888996666554 4999999996 77799999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeec-cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYD-QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsD-p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
.|+++|+|+.++++. ++.|.+ .++ +|++++| ++..++++||+.. . +
T Consensus 73 --~~v~vv~is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~-----------~-~---------------- 121 (163)
T 1psq_A 73 --DNTVVLTVSMDLPFA-QKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI-----------N-E---------------- 121 (163)
T ss_dssp --TTEEEEEEESSCHHH-HHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC-----------T-T----------------
T ss_pred --CCcEEEEEECCCHHH-HHHHHHhcCCCCcEEecCCchhHHHHHhCCcc-----------c-c----------------
Confidence 799999999988764 777875 678 8999999 8999999999841 0 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
.+...|.+||||++| +|++.|.+.+..+++++++|+++++++
T Consensus 122 ----~g~~~p~~~liD~~G-~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 122 ----WHLLARAVFVLDTDN-TIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp ----TCSBCCEEEEECTTC-BEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ----CCceEEEEEEEcCCC-eEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 012368999999997 999999999999999999999998763
No 12
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.84 E-value=2.2e-20 Score=163.11 Aligned_cols=154 Identities=12% Similarity=0.051 Sum_probs=127.1
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCC-EEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESP-AVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~p-vVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
+++|+.+|.|.|++. +|++++++++ ++++ +||.|+|..|||.|+.++..|.+++.++++
T Consensus 2 l~~G~~~P~f~l~~~-------------------~G~~~~l~~~-~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~ 61 (161)
T 3drn_A 2 VKVGDKAPLFEGIAD-------------------NGEKISLSDY-IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD 61 (161)
T ss_dssp CCTTSBCCCCEEEET-------------------TSCEEEGGGT-TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT
T ss_pred CCCCCcCCCeEeecC-------------------CCCEEEHHHh-cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH
Confidence 467888996666554 4999999997 5555 999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCC
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKG 357 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~G 357 (416)
.|+++|+|+.++++. ++.|.+ ..++|++++|++..++++||+. |
T Consensus 62 ~~v~vv~vs~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~v~----------------------------------~ 106 (161)
T 3drn_A 62 YDVVVIGVSSDDINS-HKRFKEKYKLPFILVSDPDKKIRELYGAK----------------------------------G 106 (161)
T ss_dssp TCEEEEEEESCCHHH-HHHHHHHTTCCSEEEECTTSHHHHHTTCC----------------------------------C
T ss_pred cCCEEEEEeCCCHHH-HHHHHHHhCCCceEEECCcHHHHHHcCCC----------------------------------C
Confidence 999999999998774 788885 7899999999999999999884 0
Q ss_pred CCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccccc
Q 014901 358 EGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQSET 410 (416)
Q Consensus 358 D~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~~~~~~~ 410 (416)
.....|.+||||++| +|++.|.+. ......++++++++++++...+.++-+
T Consensus 107 ~~~~~P~~~lid~~G-~i~~~~~g~-~~~~~~~~~il~~l~~l~~~~~~~~~~ 157 (161)
T 3drn_A 107 FILPARITFVIDKKG-IIRHIYNSQ-MNPANHVNEALKALKQIKEEEISLEHH 157 (161)
T ss_dssp SSSCCCEEEEECTTS-BEEEEEECS-SCTTHHHHHHHHHHHHHHHHHHC----
T ss_pred cCcccceEEEECCCC-EEEEEEecC-CCCCcCHHHHHHHHHHhhhhhcchhhc
Confidence 123468999999996 899999885 445567899999999998777666543
No 13
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.83 E-value=9.9e-21 Score=169.51 Aligned_cols=152 Identities=13% Similarity=0.075 Sum_probs=123.5
Q ss_pred CCCCCCC----CCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccc
Q 014901 199 PPVNEKV----APYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKP 274 (416)
Q Consensus 199 a~~~~~~----apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~p 274 (416)
.+++|+. +|.|.|++. +|++|+++++ +++++||+|++..|||.|+.++..|+++++
T Consensus 20 ~l~~Gd~ig~~aP~f~l~~~-------------------~G~~v~l~d~-~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~ 79 (179)
T 3ixr_A 20 HMNIGDTLNHSLLNHPLMLS-------------------GSTCKTLSDY-TNQWLVLYFYPKDNTPGSSTEGLEFNLLLP 79 (179)
T ss_dssp SSCTTCBCCHHHHHCCEEEG-------------------GGEEECGGGG-TTSEEEEEECSCTTSHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCcCCCeeEECC-------------------CCCEEeHHHH-CCCCEEEEEEcCCCCCchHHHHHHHHHHHH
Confidence 4556666 887766655 4899999996 667999999999999999999999999999
Q ss_pred hhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 275 IFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 275 eL~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
++++.|+++|+|+.++++. ++.|.+ ..++|++++|++..++++||+... +. .
T Consensus 80 ~~~~~~~~vv~Vs~D~~~~-~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~------------~~------------~-- 132 (179)
T 3ixr_A 80 QFEQINATVLGVSRDSVKS-HDSFCAKQGFTFPLVSDSDAILCKAFDVIKE------------KT------------M-- 132 (179)
T ss_dssp HHHTTTEEEEEEESCCHHH-HHHHHHHHTCCSCEEECTTCHHHHHTTCEEE------------EC------------C--
T ss_pred HHHHCCCEEEEEcCCCHHH-HHHHHHHcCCceEEEECCchHHHHHcCCccc------------cc------------c--
Confidence 9999999999999998875 788875 689999999999999999998520 10 0
Q ss_pred ccCCCC--cccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 354 NFKGEG--EIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 354 n~~GD~--lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
.|.. ...|++||||++| +|++.|. +.....++++|+++++++++
T Consensus 133 --~g~~~~~~~p~~~lID~~G-~I~~~~~--~~~~~~~~~~il~~l~~l~~ 178 (179)
T 3ixr_A 133 --YGRQVIGIERSTFLIGPTH-RIVEAWR--QVKVPGHAEEVLNKLKAHAE 178 (179)
T ss_dssp --C--CEEEECCEEEEECTTS-BEEEEEC--SCCSTTHHHHHHHHHHHHHC
T ss_pred --cCcccCCcceEEEEECCCC-EEEEEEc--CCCCCCCHHHHHHHHHHHhc
Confidence 0111 1368999999997 8999994 45566788999999998864
No 14
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.83 E-value=4.2e-20 Score=162.80 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=124.5
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.+.|.+. +|++++++++ +++++||.|++..|||.|+.++..|+++++++
T Consensus 19 ~~l~~g~~~P~f~l~~~-------------------~G~~~~l~~~-~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~- 77 (171)
T 2yzh_A 19 PELKVGDRAPEAVVVTK-------------------DLQEKIVGGA-KDVVQVIITVPSLDTPVCETETKKFNEIMAGM- 77 (171)
T ss_dssp CCCCTTSBCCCEEEEET-------------------TSCEEEESSC-CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-
T ss_pred CcCCCCCcCCceEEECC-------------------CCCEeeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-
Confidence 45678888997666554 4999999996 67789999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeec-cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYD-QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 354 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsD-p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn 354 (416)
.|+++|+|+.++++. +++|.+ ..+ +|++++| ++..+ ++||+.. . +. +
T Consensus 78 -~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~-----------~-~~-----------~---- 127 (171)
T 2yzh_A 78 -EGVDVTVVSMDLPFA-QKRFCESFNIQNVTVASDFRYRDM-EKYGVLI-----------G-EG-----------A---- 127 (171)
T ss_dssp -TTEEEEEEESSCHHH-HHHHHHHTTCCSSEEEECTTTCGG-GGGTCBB-----------C-SS-----------T----
T ss_pred -CCceEEEEeCCCHHH-HHHHHHHcCCCCeEEeecCccCcH-HHhCCEe-----------c-cc-----------c----
Confidence 799999999998764 778875 678 8999999 89999 9999852 0 00 0
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 355 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 355 ~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
..+...|.+||||++| +|++.|...+..+++++++|+++++++
T Consensus 128 --~~g~~~p~~~liD~~G-~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 128 --LKGILARAVFIIDKEG-KVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp --TTTSBCCEEEEECTTS-BEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred --cCCceeeEEEEEcCCC-eEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 0123479999999997 999999999899999999999999864
No 15
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.83 E-value=4.5e-20 Score=160.16 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=124.1
Q ss_pred CCCCCCCCCccc--cccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 199 PPVNEKVAPYSA--IENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 199 a~~~~~~apl~~--L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+|+.+|.|. |.+. +|++++++++ +++++||.|+++.|||.|+.++..|+++++++
T Consensus 6 ~l~~G~~~P~f~~~l~~~-------------------~G~~~~l~~~-~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~ 65 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLS-------------------GGTQTTLRAH-AGHWLVIYFYPKDSTPGATTEGLDFNALLPEF 65 (163)
T ss_dssp CCCCCCCGGGGGCCEECS-------------------TTCEECSGGG-TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcCCCccccccCC-------------------CCCEEEHHHh-CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHH
Confidence 367889999776 6554 5999999997 66699999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
++.|+++|+|+.++++. ++.|.+ ..++|++++|++..++++||+... . +.
T Consensus 66 ~~~~~~vv~vs~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~---~---------------------~~---- 116 (163)
T 3gkn_A 66 DKAGAKILGVSRDSVKS-HDNFCAKQGFAFPLVSDGDEALCRAFDVIKE---K---------------------NM---- 116 (163)
T ss_dssp HHTTCEEEEEESSCHHH-HHHHHHHHCCSSCEEECTTCHHHHHTTCEEE---E---------------------EE----
T ss_pred HHCCCEEEEEeCCCHHH-HHHHHHHhCCCceEEECCcHHHHHHhCCccc---c---------------------cc----
Confidence 99999999999998775 788875 789999999999999999998520 0 00
Q ss_pred CCCC--cccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 356 KGEG--EIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 356 ~GD~--lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
.|.. -..|.+||||++| +|++.|. +......+++|+++++++.+
T Consensus 117 ~~~~~~~~~p~~~lid~~G-~i~~~~~--~~~~~~~~~~il~~l~~l~~ 162 (163)
T 3gkn_A 117 YGKQVLGIERSTFLLSPEG-QVVQAWR--KVKVAGHADAVLAALKAHAK 162 (163)
T ss_dssp TTEEEEEECCEEEEECTTS-CEEEEEC--SCCSTTHHHHHHHHHHHHCC
T ss_pred ccccccCcceEEEEECCCC-eEEEEEc--CCCcccCHHHHHHHHHHHhc
Confidence 0111 1278999999997 8999994 34555678999999988764
No 16
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.83 E-value=4.9e-21 Score=174.53 Aligned_cols=153 Identities=9% Similarity=-0.000 Sum_probs=121.3
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.+.++|+++|.|.|++- ..|++|+|+++++++++||+||++.|||.|+.|++.+++.+++|+
T Consensus 12 ~~~~vGd~aPdf~l~~~------------------g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~ 73 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVYED------------------VPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFK 73 (171)
T ss_dssp CCCCTTCBCCCCEEECS------------------STTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHH
T ss_pred CcccCcCCCCCeEEecC------------------CCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHH
Confidence 45689999997776521 013899999998999999999999999999999999999999999
Q ss_pred hcCCe-EEEEecCChhhHHhhhcC-CCC--CceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 278 ALGIQ-LFAVLHEYIESEVKDFWP-RYW--GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 278 alGV~-LVaIspEs~~~~ik~F~~-~~l--~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
++|+. |++||.+++.. .+.|.+ ..+ +|++++|+++++.++||+.. .... + |.
T Consensus 74 ~~gv~~VigIS~D~~~~-~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~------------~~~~---~------g~-- 129 (171)
T 2xhf_A 74 EEGYHTIACIAVNDPFV-MAAWGKTVDPEHKIRMLADMHGEFTRALGTEL------------DSSK---M------LG-- 129 (171)
T ss_dssp HTTCCEEEEEESSCHHH-HHHHHHHHCTTCCSEEEECTTSHHHHHHTCBC------------CCHH---H------HS--
T ss_pred HCCCCEEEEEeCCCHHH-HHHHHHhcCCCCCeEEEEeCCchHHHHhCCce------------eccc---c------CC--
Confidence 99997 99999999975 788885 566 89999999999999999941 0000 0 10
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCC--CCCCHHHHHHHHH
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG--DWAPLAEVIEICT 398 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~g--Drad~~eVLaAlk 398 (416)
| .....++|||| +| +|+|.+++++++ .+.++++||++++
T Consensus 130 ---g-~~~~R~tfvId-dG-~V~~~~v~~~~~~~~~s~a~~vL~~~~ 170 (171)
T 2xhf_A 130 ---N-NRSRRYAMLID-DN-KIRSVSTEPDITGLACLLSIQRQKENK 170 (171)
T ss_dssp ---S-CCBCCEEEEEE-TT-EEEEEEETTSCSHHHHHHHHHHC----
T ss_pred ---C-cceEEEEEEEe-CC-EEEEEEEeCCCCcccCCCHHHHHHHhc
Confidence 1 12356899998 75 999999999887 5667899988775
No 17
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.83 E-value=4.2e-20 Score=165.20 Aligned_cols=151 Identities=10% Similarity=0.004 Sum_probs=122.3
Q ss_pred CCCCCCCCccccc-cccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHH-HHHHHHhccchhh
Q 014901 200 PVNEKVAPYSAIE-NISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIFD 277 (416)
Q Consensus 200 ~~~~~~apl~~L~-d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~-el~~Ls~~~peL~ 277 (416)
+++|+.+|.|.|+ +. +|++++|+++++++++||+||+..|||.|+. ++..|++++++|+
T Consensus 3 l~~G~~aP~f~l~~~~-------------------~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~ 63 (167)
T 2wfc_A 3 IKEGDKLPAVTVFGAT-------------------PNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIH 63 (167)
T ss_dssp CCTTCBCCCCEEESSS-------------------TTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHH
T ss_pred CCCCCcCCCcEeecCC-------------------CCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 5678899977776 43 4999999998788899999999999999999 9999999999999
Q ss_pred hcCC-eEEEEecCChhhHHhhhcC-CCCC--ceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 278 ALGI-QLFAVLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 278 alGV-~LVaIspEs~~~~ik~F~~-~~l~--f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
+.|+ ++|+|+.++++. ++.|.+ ..++ |++++|++.+++++||+.. ..+.. .
T Consensus 64 ~~gv~~vv~Is~d~~~~-~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~-----------~~~~~---------~---- 118 (167)
T 2wfc_A 64 GKGVDIIACMAVNDSFV-MDAWGKAHGADDKVQMLADPGGAFTKAVDMEL-----------DLSAV---------L---- 118 (167)
T ss_dssp HTTCCEEEEEESSCHHH-HHHHHHHTTCTTTSEEEECTTSHHHHHTTCEE-----------CCHHH---------H----
T ss_pred HCCCCEEEEEeCCCHHH-HHHHHHhcCCCcceEEEECCCCcHHHHcCCcc-----------ccccc---------c----
Confidence 9999 999999998764 788875 7788 9999999999999999851 11110 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCC--CCCCHHHHHHHHHh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG--DWAPLAEVIEICTQ 399 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~g--Drad~~eVLaAlk~ 399 (416)
|.....|.+||| ++| +|+|.+++.+.. +-...+.+|+.++-
T Consensus 119 ---g~~~~~p~t~lI-~~G-~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (167)
T 2wfc_A 119 ---GNVRSKRYSLVI-EDG-VVTKVNVEPDGKGLTCSLAPNILSQLGG 161 (167)
T ss_dssp ---SSCEECCEEEEE-ETT-EEEEEEECTTSSSSSTTSHHHHHHHHC-
T ss_pred ---CcccceEEEEEE-eCC-EEEEEEecCCCCcceeccHHHHHHHhcc
Confidence 113356999999 886 999999998764 34566777766643
No 18
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.82 E-value=5.1e-20 Score=161.99 Aligned_cols=147 Identities=6% Similarity=0.044 Sum_probs=122.6
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.+.+|+.+|.|.|++. +|++++++++ +++++||.|++..|||.|+.++..|+++++++
T Consensus 16 ~~~~G~~~P~f~l~~~-------------------~G~~v~l~~~-~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-- 73 (165)
T 1q98_A 16 FPQVGEIVENFILVGN-------------------DLADVALNDF-ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-- 73 (165)
T ss_dssp CCCTTCBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--
T ss_pred cCCCCCCCCCeEEECC-------------------CCCEEehHHh-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--
Confidence 5678888997666554 4999999996 77899999999999999999999999999888
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCC-Cceeeecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp-~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
.|+++|+|+.++++. ++.|.+ .++ +|++++|+ +..++++||+.. . +. ..
T Consensus 74 ~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~-----------~-~~---------------~~ 125 (165)
T 1q98_A 74 SNTIVLCISADLPFA-QARFCGAEGIENAKTVSTFRNHALHSQLGVDI-----------Q-TG---------------PL 125 (165)
T ss_dssp TTEEEEEEESSCHHH-HTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE-----------C-SS---------------TT
T ss_pred CCCEEEEEeCCCHHH-HHHHHHHcCCCceEEeeccccchHHHHhCcee-----------c-cc---------------cc
Confidence 799999999988774 788886 678 79999998 899999999841 0 00 00
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 398 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk 398 (416)
. +...|.+||||++| +|++.|.+.+..++++++++|++++
T Consensus 126 ~--g~~~p~~~liD~~G-~i~~~~~~~~~~~~~~~~~~l~~l~ 165 (165)
T 1q98_A 126 A--GLTSRAVIVLDEQN-NVLHSQLVEEIKEEPNYEAALAVLA 165 (165)
T ss_dssp T--TSBCCEEEEECTTS-BEEEEEECSBTTSCCCHHHHHHTTC
T ss_pred C--CccceeEEEEcCCC-EEEEEEeCCCCCCCCCHHHHHHhhC
Confidence 1 13569999999996 9999999988999999999998763
No 19
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.81 E-value=1.8e-19 Score=161.26 Aligned_cols=132 Identities=12% Similarity=0.035 Sum_probs=108.8
Q ss_pred CceechhhccCCCEEEEeecCCCCcchHHH-HHHHHhccchhhhcCCe-EEEEecCChhhHHhhhcC-CC--CCceeeec
Q 014901 236 PPMKALELWRESPAVLLCIRRPGCIMCRAE-AHQLYAKKPIFDALGIQ-LFAVLHEYIESEVKDFWP-RY--WGGVVVYD 310 (416)
Q Consensus 236 ~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~e-l~~Ls~~~peL~alGV~-LVaIspEs~~~~ik~F~~-~~--l~f~VLsD 310 (416)
++++++++++++++||+||+..|||.|+.| +..|++.+++|++.|+. +|+|+.+++.. ++.|.+ +. ++|++++|
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~-~~~~~~~~~~~~~fp~l~D 111 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYT-VNAWAEKIQAKDAIEFYGD 111 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHH-HHHHHHHTTCTTTSEEEEC
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHH-HHHHHHHhCCCCceEEEEC
Confidence 899999988888899999999999999999 99999999999999999 99999988764 778875 55 48999999
Q ss_pred cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCC--CC
Q 014901 311 QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--WA 388 (416)
Q Consensus 311 p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gD--ra 388 (416)
++.++.++||+.. . . +. .|+ | ....+.+|+|+ +| +|+|.|++.++++ +.
T Consensus 112 ~~~~~~~~ygv~~----~------~-~~----------~~~-----g-~~~~~~t~~I~-~G-~I~~~~~~~~~~~~~~~ 162 (171)
T 2pwj_A 112 FDGSFHKSLELTT----D------L-SA----------GLL-----G-IRSERWSAYVV-DG-KVKALNVEESPSDVKVS 162 (171)
T ss_dssp TTCHHHHHHTCEE----E------C-TT----------TTC-----C-EEECCEEEEEE-TT-EEEEEEECSSTTCCSSS
T ss_pred CccHHHHHhCCcc----c------c-cc----------ccC-----C-cccceeEEEEE-CC-EEEEEEeecCCCCCccc
Confidence 9999999999851 0 0 00 010 0 01346789999 86 9999999999875 67
Q ss_pred CHHHHHHHH
Q 014901 389 PLAEVIEIC 397 (416)
Q Consensus 389 d~~eVLaAl 397 (416)
++++||++|
T Consensus 163 ~~~~il~~l 171 (171)
T 2pwj_A 163 GAETILGQI 171 (171)
T ss_dssp SHHHHHHHC
T ss_pred CHHHHHhcC
Confidence 899999874
No 20
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.81 E-value=5e-20 Score=182.07 Aligned_cols=137 Identities=13% Similarity=0.137 Sum_probs=117.6
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccc
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 312 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~ 312 (416)
+|++|+|+++ +++++||.||+..|||.|+.|+++|++.. ..|+++|+||.+++.. ++.|.+ ++++|++++|++
T Consensus 13 ~G~~~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e~~~~~~~~----~~~~~v~gis~D~~~~-~~~f~~~~~l~fp~l~D~~ 86 (322)
T 4eo3_A 13 EGKTFTHVDL-YGKYTILFFFPKAGTSGSTREAVEFSREN----FEKAQVVGISRDSVEA-LKRFKEKNDLKVTLLSDPE 86 (322)
T ss_dssp TSCEEEGGGT-TTSEEEEEECSSTTSHHHHHHHHHHHHSC----CTTEEEEEEESCCHHH-HHHHHHHHTCCSEEEECTT
T ss_pred CcCEEeHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHh----hCCCEEEEEeCCCHHH-HHHHHHhhCCceEEEEcCc
Confidence 5999999996 67899999999999999999999997632 2489999999998875 788886 789999999999
Q ss_pred hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHH
Q 014901 313 MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAE 392 (416)
Q Consensus 313 r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~e 392 (416)
.++.++||+.. ++...|+|||||++| +|++.|++.+..+|+ ++
T Consensus 87 ~~v~~~ygv~~----------------------------------~~~~~r~tfiId~~G-~i~~~~~~v~~~~h~--~~ 129 (322)
T 4eo3_A 87 GILHEFFNVLE----------------------------------NGKTVRSTFLIDRWG-FVRKEWRRVKVEGHV--QE 129 (322)
T ss_dssp CHHHHHTTCEE----------------------------------TTEECCEEEEECTTS-BEEEEEESCCSTTHH--HH
T ss_pred hHHHHhcCCCC----------------------------------CCcCccEEEEECCCC-EEEEEEeCCCccccH--HH
Confidence 99999999831 122357999999997 999999999999988 99
Q ss_pred HHHHHHhhhhhhccccccccc
Q 014901 393 VIEICTQLQDQQRDQSETIKT 413 (416)
Q Consensus 393 VLaAlk~l~~~~~~~~~~~~~ 413 (416)
||+++++++.+...-.|.|++
T Consensus 130 ~l~~~~~~~~~~~~~~~~I~~ 150 (322)
T 4eo3_A 130 VKEALDRLIEEDLSLNKHIEW 150 (322)
T ss_dssp HHHHHHHHHHHHTSCCHHHHH
T ss_pred HHHHHhhhchhhhHHHHHHHh
Confidence 999999998777777777664
No 21
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.81 E-value=1.5e-19 Score=165.84 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=126.2
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+++|+.+|.|.|++. +|++++|+++ +++++||.|++..|||.|+.++..|++++.++
T Consensus 49 ~~~l~~G~~aPdf~l~d~-------------------~G~~v~L~d~-~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~ 108 (200)
T 3zrd_A 49 GKLPQIGDKAKDFTLVAK-------------------DLSDVALSSF-AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL 108 (200)
T ss_dssp SCCCCTTCBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS
T ss_pred cccCCCCCCCCCeEEECC-------------------CCCEEcHHHh-CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh
Confidence 446788999997776655 4999999996 77899999999999999999999999999998
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeecc-chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ-GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp-~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
.|+++|+|+.++++. ++.|.+ .++ +|++++|+ +..++++||+... ..
T Consensus 109 --~~v~vv~Is~D~~~~-~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~~------------~~--------------- 158 (200)
T 3zrd_A 109 --ENTVVLCISSDLPFA-QSRFCGAEGLSNVITLSTLRGADFKQAYGVAIT------------EG--------------- 158 (200)
T ss_dssp --TTEEEEEEESSCHHH-HTTCTTTTTCTTEEEEETTSCTHHHHHTTCEEC------------SS---------------
T ss_pred --CCCEEEEEECCCHHH-HHHHHHHcCCCCceEEecCchHHHHHHhCceee------------cc---------------
Confidence 699999999998875 788886 778 99999999 9999999998520 00
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 398 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk 398 (416)
.. .+...|++||||++| +|+|.++..+..+.++++++|++++
T Consensus 159 ~~--~g~~~p~~~lID~~G-~I~~~~~~~~~~~~~~~~~~l~~Lk 200 (200)
T 3zrd_A 159 PL--AGLTARAVVVLDGQD-NVIYSELVNEITTEPNYDAALAALK 200 (200)
T ss_dssp TT--TTSBCCEEEEECTTS-BEEEEEECSBTTSCCCHHHHHHHHC
T ss_pred cC--CCccccEEEEECCCC-eEEEEEecCCcccCCCHHHHHHhhC
Confidence 00 122468999999997 9999999999999999999999874
No 22
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.81 E-value=2.9e-19 Score=161.20 Aligned_cols=149 Identities=8% Similarity=-0.006 Sum_probs=121.6
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.+|+.+|.|.|++. . +| ++|+++++ +++++||.|++..|||.|+.++..|+++++++++
T Consensus 2 ~~G~~aP~f~l~~~-----~-------------~G~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~ 62 (186)
T 1n8j_A 2 LINTKIKPFKNQAF-----K-------------NGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTELGDVADHYEELQK 62 (186)
T ss_dssp CTTCBCCCCEEEEE-----E-------------TTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCcEeecc-----c-------------CCcceEEEHHHH-CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH
Confidence 56788886666554 1 27 89999996 6778999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-C----CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-R----YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~----~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. .. .
T Consensus 63 ~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~-------------~~----------~---- 114 (186)
T 1n8j_A 63 LGVDVYSVSTDTHFT-HKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMR-------------ED----------E---- 114 (186)
T ss_dssp TTEEEEEEESSCHHH-HHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEE-------------TT----------T----
T ss_pred CCCEEEEEECCCHHH-HHHHHHHcCcccCCceeEEECCchHHHHHhCCcc-------------CC----------C----
Confidence 999999999988764 777875 5 6899999999999999999841 00 0
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
++..|.+||||++| +|++.|......+ .+.++|+++++.++..
T Consensus 115 -----g~~~p~~~lID~~G-~i~~~~~~~~~~~-~~~~~l~~~l~~l~~~ 157 (186)
T 1n8j_A 115 -----GLADRATFVVDPQG-IIQAIEVTAEGIG-RDASDLLRKIKAAQYV 157 (186)
T ss_dssp -----TEECEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHH
T ss_pred -----CceeeEEEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHHHHHHH
Confidence 13468999999997 8999998764322 3689999999988653
No 23
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.81 E-value=8.8e-20 Score=167.35 Aligned_cols=161 Identities=14% Similarity=0.069 Sum_probs=120.8
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHH-HHHHHHhccchhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIFD 277 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~-el~~Ls~~~peL~ 277 (416)
-.++|++.| ++++..+++....+|. ..-++|+|+++++++++||+||++.|||.|+. |+.+|++.+++|+
T Consensus 9 ~~~~~~~~p-----~~~~~~~~~~~~~~~~----~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~ 79 (176)
T 4f82_A 9 MIQVGDALP-----DAQLFEFIDDAREGCT----LGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLR 79 (176)
T ss_dssp CCCTTCBCC-----CCEEEEEECSCCTTCC----SEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred hhhcCCcCC-----ceEEEEeccccccccc----CCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 347788888 6666555420000000 01268999999899999999999999999999 9999999999999
Q ss_pred hcCC-eEEEEecCChhhHHhhhcC-CCCC--ceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 278 ALGI-QLFAVLHEYIESEVKDFWP-RYWG--GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 278 alGV-~LVaIspEs~~~~ik~F~~-~~l~--f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
++|+ ++|+||++++.. .+.|.+ ..++ |++++|++.++.++||+... . +. .|+
T Consensus 80 ~~g~d~VigIS~D~~~~-~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~----------~-~~----------~G~-- 135 (176)
T 4f82_A 80 AAGIDEIWCVSVNDAFV-MGAWGRDLHTAGKVRMMADGSAAFTHALGLTQD----------L-SA----------RGM-- 135 (176)
T ss_dssp HTTCCEEEEEESSCHHH-HHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEE----------C-GG----------GTC--
T ss_pred hCCCCEEEEEeCCCHHH-HHHHHHHhCCCCCceEEEcCchHHHHHhCCCcc----------c-cc----------cCC--
Confidence 9999 999999999875 788886 7788 99999999999999999520 0 00 011
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCC-CCCCCHHHHHHHHH
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNF-GDWAPLAEVIEICT 398 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~-gDrad~~eVLaAlk 398 (416)
| ....+++||| ++| +|+|.+++..- .+..+.++||++|+
T Consensus 136 ---g-~~s~R~tfII-~dG-~I~~~~~~~~~~~~~~~a~~vL~~Lk 175 (176)
T 4f82_A 136 ---G-IRSLRYAMVI-DGG-VVKTLAVEAPGKFEVSDAASVLATLT 175 (176)
T ss_dssp ---C-EEECCEEEEE-ETT-EEEEEEECCTTCCSSSSHHHHHHTCC
T ss_pred ---C-cccccEEEEE-cCC-EEEEEEEcCCCCcchhhHHHHHHHhh
Confidence 0 1235799999 886 99999998732 13456777777653
No 24
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.80 E-value=4.3e-19 Score=167.88 Aligned_cols=153 Identities=14% Similarity=0.062 Sum_probs=125.2
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.|.|+++. +.+|++|+|+++ +++++||.|++..|||.|+.++..|++++++|+
T Consensus 46 ~~l~vG~~aPdF~l~~~~----------------d~~G~~vsLsd~-~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~ 108 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVI----------------NGEFKELKLSDY-RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFR 108 (240)
T ss_dssp CSCCTTSBCCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCcEeeeee----------------CCCCcEEEHHHh-CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 346789999977766541 234789999996 778999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcCC--------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWPR--------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~~--------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++.+. .+.|.+. .++|++++|++.+++++||+.. +.
T Consensus 109 ~~gv~vv~Is~D~~~~-~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~-------------~~----------- 163 (240)
T 3qpm_A 109 AINTEVVACSVDSQFT-HLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYL-------------ED----------- 163 (240)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE-------------TT-----------
T ss_pred HCCCEEEEEECCCHHH-HHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCcc-------------cc-----------
Confidence 9999999999988764 6677642 6899999999999999999841 00
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
.+...|++||||++| +|+|.+.+.... ..+++++|++++.++.
T Consensus 164 --------~g~~~p~~flID~~G-~I~~~~~~~~~~-~~~~~eil~~l~~lq~ 206 (240)
T 3qpm_A 164 --------QGHTLRGLFIIDEKG-VLRQITMNDLPV-GRSVDETLRLVQAFQY 206 (240)
T ss_dssp --------TTEECEEEEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHHHHHH
T ss_pred --------CCCccceEEEEcCCC-eEEEEEecCCCC-CCCHHHHHHHHHHhhh
Confidence 123468999999997 999999876443 4478999999998864
No 25
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.79 E-value=4.6e-19 Score=169.67 Aligned_cols=153 Identities=14% Similarity=0.072 Sum_probs=125.8
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.|.|+++. +.+|++|+|+++ +++++||+|++..|||.|+.++.+|++++++|+
T Consensus 60 ~~l~vG~~aPdF~l~~l~----------------d~~G~~vsLsd~-kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~ 122 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVI----------------DGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122 (254)
T ss_dssp CCCCTTSBCCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHH
T ss_pred cccCCCCCCCCcEeeeec----------------CCCCcEEeHHHH-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 456789999977766541 234889999996 777899999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcCC--------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWPR--------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~~--------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++... .+.|.+. .++|++++|++..++++||+.. +.
T Consensus 123 ~~gv~vv~IS~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~-------------~~----------- 177 (254)
T 3tjj_A 123 SINTEVVACSVDSQFT-HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYL-------------ED----------- 177 (254)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEE-------------TT-----------
T ss_pred HcCCEEEEEcCCCHHH-HHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCcc-------------cc-----------
Confidence 9999999999998764 6777652 6899999999999999999841 00
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
.+...|++||||++| +|++.+.+.... ..+++++|++++.++.
T Consensus 178 --------~g~~~p~tflID~~G-~I~~~~~~~~~~-~~~~~eil~~L~alq~ 220 (254)
T 3tjj_A 178 --------SGHTLRGLFIIDDKG-ILRQITLNDLPV-GRSVDETLRLVQAFQY 220 (254)
T ss_dssp --------TTEECEEEEEECTTS-BEEEEEEECTTC-CCCHHHHHHHHHHHHH
T ss_pred --------CCCccceEEEECCCC-eEEEEEecCCCC-CCCHHHHHHHHHhhcc
Confidence 123468999999996 999999986543 3478999999988863
No 26
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.79 E-value=5.9e-19 Score=163.10 Aligned_cols=155 Identities=13% Similarity=0.068 Sum_probs=124.0
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.|.|++.. +.+|++++++++ +++++||.|++..|||.|+.++..|++++++|+
T Consensus 17 ~~~~~G~~aP~f~l~~~~----------------~~~g~~v~l~d~-~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~ 79 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVI----------------DGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 79 (211)
T ss_dssp --CCSSCBCCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHH
T ss_pred ccCCCCCcCCCeEeeccc----------------CCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 456788889977665540 123789999996 678999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. ..
T Consensus 80 ~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-------------~~----------- 134 (211)
T 2pn8_A 80 SINTEVVACSVDSQFT-HLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYL-------------ED----------- 134 (211)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEE-------------TT-----------
T ss_pred HCCCEEEEEECCCHHH-HHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcc-------------cC-----------
Confidence 9999999999988764 777775 3 5899999999999999999841 00
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
.+...|.+||||++| +|+|.+.+..... .++++++++++.++..+
T Consensus 135 --------~g~~~p~~~lID~~G-~I~~~~~g~~~~~-~~~~ell~~l~~l~~~~ 179 (211)
T 2pn8_A 135 --------SGHTLRGLFIIDDKG-ILRQITLNDLPVG-RSVDETLRLVQAFQYTD 179 (211)
T ss_dssp --------TTEECEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHHH
T ss_pred --------CCcccceEEEECCCC-EEEEEEecCCCCC-CCHHHHHHHHHHhhhcc
Confidence 013478999999996 9999998754332 37899999999887543
No 27
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.79 E-value=8.3e-19 Score=164.31 Aligned_cols=157 Identities=16% Similarity=0.160 Sum_probs=124.6
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.+..|+.+|.|.+++. +| +++++++..++++||+||...|||.|+.++.+|++++++|++
T Consensus 4 ~l~~G~~aP~F~l~~~-------------------~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~ 63 (224)
T 1prx_A 4 GLLLGDVAPNFEANTT-------------------VG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAK 63 (224)
T ss_dssp -CCTTCBCCCCEEEET-------------------TE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcCCCCCcEEecC-------------------CC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH
Confidence 3567888996666554 48 899999766568999999999999999999999999999999
Q ss_pred cCCeEEEEecCChhhHHhhhcC-----------CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-----------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 347 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-----------~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~ 347 (416)
.|+++|+|+.++.+. ++.|.+ ..++|++++|++++++++||+.. +..
T Consensus 64 ~~v~vi~IS~D~~~~-~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~-------------~~~-------- 121 (224)
T 1prx_A 64 RNVKLIALSIDSVED-HLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLD-------------PAE-------- 121 (224)
T ss_dssp TTEEEEEEESSCHHH-HHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSC-------------SCT--------
T ss_pred CCCEEEEEcCCCHHH-HHHHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCC-------------ccc--------
Confidence 999999999988764 555553 57899999999999999999841 100
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 348 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 348 ~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
. +..|-....|++||||++| +|++.+.......+ +.++|+++++.++...
T Consensus 122 ---~--~~~g~~~~~p~~fiID~~G-~I~~~~~~~~~~gr-~~~eil~~i~~l~~~~ 171 (224)
T 1prx_A 122 ---K--DEKGMPVTARVVFVFGPDK-KLKLSILYPATTGR-NFDEILRVVISLQLTA 171 (224)
T ss_dssp ---T--CSSSCCTTCCEEEEECTTS-BEEEEEECCTTBCC-CHHHHHHHHHHHHHHH
T ss_pred ---c--cCCCccccceEEEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHHHHHhhc
Confidence 0 0012234579999999996 99999987655444 6899999999987543
No 28
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.79 E-value=1.2e-18 Score=150.45 Aligned_cols=148 Identities=15% Similarity=0.067 Sum_probs=122.2
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+.+|+.+|.+.+.+. +|++++++++..++++||.|++..|||.|+.++..|.++..++.+.
T Consensus 9 ~~~G~~~p~f~l~~~-------------------~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~ 69 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQ-------------------NQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND 69 (160)
T ss_dssp CCTTSBCCCCEEECT-------------------TSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS
T ss_pred CCCCCCCCCeEeEcC-------------------CCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC
Confidence 567888886655544 4999999997444489999999999999999999999999999988
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeeecc--chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 014901 280 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ--GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 356 (416)
Q Consensus 280 GV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp--~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~ 356 (416)
|+++|+|+.++++. ++.|.+ ..++|++++|. +..++++||+.. . .
T Consensus 70 ~~~vv~is~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~-----------~-~------------------- 117 (160)
T 1xvw_A 70 DSAALAISVGPPPT-HKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN-----------E-Q------------------- 117 (160)
T ss_dssp SEEEEEEESCCHHH-HHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE-----------T-T-------------------
T ss_pred CcEEEEEeCCCHHH-HHHHHHhcCCCceEEecCCcChHHHHHcCCcc-----------c-c-------------------
Confidence 99999999988764 777875 67899999995 999999999841 0 0
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 357 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 357 GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
.+.+.|.+||||++| +|++.|.+. .....++++++++++.++
T Consensus 118 -~~~p~~~~~lid~~G-~i~~~~~g~-~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 118 -AGIANRGTFVVDRSG-IIRFAEMKQ-PGEVRDQRLWTDALAALT 159 (160)
T ss_dssp -TTEECSEEEEECTTS-BEEEEEECC-TTCCCCHHHHHHHHHHTC
T ss_pred -CCCeeeeEEEECCCC-eEEEEEecC-CCCCCCHHHHHHHHHHhc
Confidence 122345999999997 899999987 677789999999998765
No 29
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.79 E-value=7e-19 Score=166.61 Aligned_cols=156 Identities=16% Similarity=0.146 Sum_probs=124.4
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+..|+.+|.|.+++. +| +|+|.++..++++||+|++..|||.|+.++.+|++++++|++.
T Consensus 3 l~iG~~aPdF~l~~~-------------------~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~ 62 (233)
T 2v2g_A 3 ITLGEVFPNFEADST-------------------IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR 62 (233)
T ss_dssp CCTTCBCCCCEEEET-------------------TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT
T ss_pred CCCCCCCCCcEEecC-------------------CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc
Confidence 467888996666554 48 8999997655589999999999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC-------C--CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 014901 280 GIQLFAVLHEYIESEVKDFWP-------R--YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 350 (416)
Q Consensus 280 GV~LVaIspEs~~~~ik~F~~-------~--~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G 350 (416)
|+++|+|+.++.+. ++.|.+ . .++|++++|++++++++||+.. +..
T Consensus 63 ~v~vigIS~D~~~~-~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~-------------~~~----------- 117 (233)
T 2v2g_A 63 GVKLIALSCDNVAD-HKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVD-------------PDE----------- 117 (233)
T ss_dssp TEEEEEEESSCHHH-HHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEE-------------EEE-----------
T ss_pred CCEEEEEcCCCHHH-HHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcC-------------ccc-----------
Confidence 99999999988764 566664 3 7899999999999999999841 000
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 351 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 351 ~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
. +..|.....|++||||++| +|++.+.......+ +.++||+++++++...
T Consensus 118 ~--~~~g~~~~~p~~fiID~~G-~I~~~~~~~~~~gr-~~~eilr~l~~Lq~~~ 167 (233)
T 2v2g_A 118 R--TSTGMPLTCRAVFIIGPDK-KLKLSILYPATTGR-NFSEILRVIDSLQLTA 167 (233)
T ss_dssp E--CTTCCEEECEEEEEECTTS-BEEEEEEECTTBCC-CHHHHHHHHHHHHHHH
T ss_pred c--cCCCcccccceEEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHHHHHhhc
Confidence 0 0012234579999999997 89999987654444 7899999999987543
No 30
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.79 E-value=8.3e-19 Score=156.62 Aligned_cols=147 Identities=11% Similarity=0.083 Sum_probs=120.6
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCCC----ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTP----PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~----~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
.+|+.+|.|.|.+. +|+ +++++++ +++++||.|+|..|||.|+.++..|.++..++
T Consensus 2 ~~G~~~P~f~l~~~-------------------~g~~~~~~~~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~ 61 (187)
T 1we0_A 2 LIGTEVQPFRAQAF-------------------QSGKDFFEVTEADL-KGKWSIVVFYPADFSFVCPTELEDVQKEYAEL 61 (187)
T ss_dssp CTTCBCCCCEEEEE-------------------CSSSCCEEEETTTT-SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHH
T ss_pred CCCCcCCCeEEecc-------------------CCCccceEecHHHH-CCCCEEEEEECCCCCcchHHHHHHHHHHHHHH
Confidence 56778886665554 367 9999997 67899999999999999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-C----CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-R----YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~----~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
.+.|+++|+|+.+..+. ++.|.+ . .++|++++|++..++++||+.. . .
T Consensus 62 ~~~~v~vv~vs~d~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-----------~-~-------------- 114 (187)
T 1we0_A 62 KKLGVEVYSVSTDTHFV-HKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLN-----------E-E-------------- 114 (187)
T ss_dssp HHTTEEEEEEESSCHHH-HHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEE-----------T-T--------------
T ss_pred HHcCCEEEEEECCCHHH-HHHHHHHhccccCCCceEEECCchHHHHHhCCCc-----------C-C--------------
Confidence 99999999999988764 777775 4 6899999999999999999841 0 0
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
.+...|.+||||++| +|++.|.+....+ .+.++++++++.+..
T Consensus 115 ------~g~~~P~~~lid~~G-~i~~~~~g~~~~~-~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 115 ------TGLADRGTFIIDPDG-VIQAIEINADGIG-RDASTLINKVKAAQY 157 (187)
T ss_dssp ------TTEECEEEEEECTTS-BEEEEEEECTTSC-CCTTHHHHHHHHHHH
T ss_pred ------CCceeeEEEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHHHHhh
Confidence 023478999999996 8999999875443 367889988888765
No 31
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.79 E-value=1.9e-18 Score=159.91 Aligned_cols=153 Identities=10% Similarity=0.067 Sum_probs=125.5
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccch
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 275 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~pe 275 (416)
..+.+|+.+|.|.+++.. .+| ++++++++++++++||.|++..|||.|+.++..|++++++
T Consensus 19 ~~l~~G~~aP~f~l~~~~-----------------~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~ 81 (213)
T 2i81_A 19 SPTYVGKEAPFFKAEAVF-----------------GDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDA 81 (213)
T ss_dssp -CCCBTSBCCCCEEEEEC-----------------TTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHH
T ss_pred ccccCCCcCCCeEeeccc-----------------cCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 346788889966665541 138 8999999768889999999999999999999999999999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 014901 276 FDALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 347 (416)
Q Consensus 276 L~alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~ 347 (416)
+++.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. +
T Consensus 82 ~~~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-------------~---------- 137 (213)
T 2i81_A 82 FHERNVELLGCSVDSKYT-HLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-------------D---------- 137 (213)
T ss_dssp HHHTTEEEEEEESSCHHH-HHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-------------T----------
T ss_pred HHHCCCEEEEEeCCCHHH-HHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-------------c----------
Confidence 999999999999998764 777775 3 6899999999999999999841 0
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 348 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 348 ~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
++...|++||||++| +|+|.+.+..... .+.++++++++.++..
T Consensus 138 ----------~g~~~p~~~lID~~G-~i~~~~~~~~~~~-~~~~ell~~l~~l~~~ 181 (213)
T 2i81_A 138 ----------DSVSLRAFVLIDMNG-IVQHLLVNNLAIG-RSVDEILRIIDAIQHH 181 (213)
T ss_dssp ----------TTEECEEEEEECTTS-BEEEEEEECTTCC-CCHHHHHHHHHHHHHH
T ss_pred ----------cCCcccEEEEECCCC-EEEEEEecCCCCC-CCHHHHHHHHHHHHhh
Confidence 023478999999996 8999998765433 4889999999988743
No 32
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.79 E-value=1.4e-18 Score=162.53 Aligned_cols=152 Identities=13% Similarity=0.064 Sum_probs=124.5
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
+.+|+.+|.|.|++.. .+| ++++++++++++++||.|+|..|||.|+.++..|++++.+|+
T Consensus 25 l~~G~~aP~F~l~~~~-----------------~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~ 87 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLN-----------------KNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFE 87 (221)
T ss_dssp -CTTSBCCCCEEEEEC-----------------TTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCeEEeccc-----------------cCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHH
Confidence 5678889966665541 138 899999976888999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+. . . .
T Consensus 88 ~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~------------~-----------~ 142 (221)
T 2c0d_A 88 NKNVELLGISVDSVYS-HLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-Y------------D-----------N 142 (221)
T ss_dssp HTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-E------------T-----------T
T ss_pred HCCCEEEEEeCCCHHH-HHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-c------------c-----------C
Confidence 9999999999988764 677774 3 578999999999999999882 0 0 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
+...|.+||||++| +|+|.+.+.. ....+.++|+++++.++..+
T Consensus 143 ---------g~~~P~~~lID~~G-~I~~~~~g~~-~~~~~~~ell~~l~~L~~~~ 186 (221)
T 2c0d_A 143 ---------SFALRGLFIIDKNG-CVRHQTVNDL-PIGRNVQEVLRTIDSIIHVD 186 (221)
T ss_dssp ---------TEECEEEEEECTTS-BEEEEEEECT-TCCCCHHHHHHHHHHHHHHH
T ss_pred ---------CCccceEEEECCCC-eEEEEEecCC-CCCCCHHHHHHHHHHHhhhh
Confidence 12468999999996 9999998865 34468999999999987544
No 33
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.78 E-value=1e-18 Score=156.88 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=122.1
Q ss_pred CCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 202 NEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 202 ~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+|+.+|.|.|++.. .+| ++++++++++++++||.|++..|||.|+.++..|.+++.++++.
T Consensus 2 ~G~~aP~f~l~~~~-----------------~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~ 64 (192)
T 2h01_A 2 FQGQAPSFKAEAVF-----------------GDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER 64 (192)
T ss_dssp CSSBCCCCEEEEEC-----------------TTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT
T ss_pred CCCcCCCcEeEeee-----------------cCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 57788866555440 138 89999998788899999999999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 280 GIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 280 GV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
|+++|+|+.++++. ++.|.+ . .++|++++|++..++++||+.. .
T Consensus 65 ~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-------------~-------------- 116 (192)
T 2h01_A 65 NVELLGCSVDSKFT-HLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-------------N-------------- 116 (192)
T ss_dssp TEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-------------T--------------
T ss_pred CCEEEEEEeCCHHH-HHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-------------c--------------
Confidence 99999999988764 677775 3 6899999999999999999841 0
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
++..+|.+||||++| +|++.+.+..... .+.++++++++.++..
T Consensus 117 ------~g~~~P~~~liD~~G-~i~~~~~g~~~~~-~~~~~l~~~l~~l~~~ 160 (192)
T 2h01_A 117 ------ESVALRAFVLIDKQG-VVQHLLVNNLALG-RSVDEILRLIDALQHH 160 (192)
T ss_dssp ------TTEECCEEEEECTTS-BEEEEEEGGGSSG-GGHHHHHHHHHHHHHH
T ss_pred ------CCceeeEEEEEcCCC-EEEEEEeCCCCCC-CCHHHHHHHHHHHhhh
Confidence 123468999999996 8999998765433 3789999999988743
No 34
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.78 E-value=3.8e-18 Score=151.64 Aligned_cols=150 Identities=11% Similarity=0.081 Sum_probs=121.0
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+.+|+.+|.|.|.+. +|++++++++ +++++||.|++..|||.|+.++..|.+++.+
T Consensus 15 ~~~l~~G~~~P~f~l~~~-------------------~G~~v~l~~~-~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~- 73 (175)
T 1xvq_A 15 GELPAVGSPAPAFTLTGG-------------------DLGVISSDQF-RGKSVLLNIFPSVDTPVCATSVRTFDERAAA- 73 (175)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-
T ss_pred CCCCCcCCcCCCeEEECC-------------------CCCEEeHHHc-CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-
Confidence 346678888996666554 4999999996 7789999999988899999999999998877
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-CceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 354 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn 354 (416)
.|+++|+|+.++++. ++.|.+ ..+ +|++++|++..++++||+.. . +. .
T Consensus 74 --~~v~vv~Is~D~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-----------~-~~---------------~ 123 (175)
T 1xvq_A 74 --SGATVLCVSKDLPFA-QKRFCGAEGTENVMPASAFRDSFGEDYGVTI-----------A-DG---------------P 123 (175)
T ss_dssp --TTCEEEEEESSCHHH-HTTCC------CEEEEECTTSSHHHHTTCBB-----------C-SS---------------T
T ss_pred --cCCEEEEEECCCHHH-HHHHHHHcCCCCceEeeCCHHHHHHHhCCcc-----------c-cc---------------c
Confidence 789999999988875 788876 667 89999999999999999852 0 00 0
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 355 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 355 ~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
..+...|.+||||++| +|++.|......+.++++++|+++++-
T Consensus 124 --~~g~~~p~~~lid~~G-~I~~~~~g~~~~~~~~~~~~l~~l~~~ 166 (175)
T 1xvq_A 124 --MAGLLARAIVVIGADG-NVAYTELVPEIAQEPNYEAALAALGAT 166 (175)
T ss_dssp --TTTSBCSEEEEECTTS-BEEEEEECSBTTCCCCHHHHHHHHHHT
T ss_pred --cCCcccceEEEECCCC-eEEEEEECCCcCCCCCHHHHHHHHHhh
Confidence 1124579999999997 899999988888999999999998753
No 35
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.78 E-value=2.2e-18 Score=160.00 Aligned_cols=157 Identities=15% Similarity=0.108 Sum_probs=125.7
Q ss_pred CCCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccch
Q 014901 196 IQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 275 (416)
Q Consensus 196 ~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~pe 275 (416)
....+.+|+.+|.|.++++ . +.+|++++++++ +++++||.|+|..|||+|+.++..|.+++++
T Consensus 23 ~~~~l~~G~~aP~f~l~~~-----~-----------~~~g~~v~l~d~-~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~ 85 (220)
T 1zye_A 23 EDPAPAVTQHAPYFKGTAV-----V-----------SGEFKEISLDDF-KGKYLVLFFYPLDFTFVCPTEIIAFSDKASE 85 (220)
T ss_dssp ----CCTTSBCCCCEEEEE-----C-----------SSSEEEEEGGGG-TTSEEEEEECSCTTCSSSHHHHHHHHHHHHH
T ss_pred cCCcccCCCCCCCcEEEee-----e-----------CCCCcEEEHHHh-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 3446688999997766543 1 235899999996 6689999999999999999999999999999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 014901 276 FDALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 347 (416)
Q Consensus 276 L~alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~ 347 (416)
+++.|+++|+|+.++.+. .+.|.+ . .++|++++|++..++++||+.. +.
T Consensus 86 ~~~~~v~vv~Is~D~~~~-~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~-------------~~--------- 142 (220)
T 1zye_A 86 FHDVNCEVVAVSVDSHFS-HLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLL-------------EG--------- 142 (220)
T ss_dssp HHHTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-------------TT---------
T ss_pred HHHCCCEEEEEECCCHHH-HHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCee-------------cC---------
Confidence 999999999999988764 667764 2 6899999999999999999841 00
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 348 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 348 ~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
.+..+|.+||||++| +|+|.+.+. .....+.++++++++.++..+
T Consensus 143 ----------~g~~~P~~~liD~~G-~I~~~~~g~-~~~~~~~~ell~~l~~l~~~~ 187 (220)
T 1zye_A 143 ----------PGLALRGLFIIDPNG-VIKHLSVND-LPVGRSVEETLRLVKAFQFVE 187 (220)
T ss_dssp ----------TTEECEEEEEECTTS-BEEEEEEEC-TTCCCCHHHHHHHHHHHHHTT
T ss_pred ----------CCcccceEEEECCCC-EEEEEEecC-CCCCCCHHHHHHHHHHhhhhc
Confidence 123578999999996 899999876 444568999999999987543
No 36
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.78 E-value=3.1e-18 Score=149.41 Aligned_cols=149 Identities=10% Similarity=0.087 Sum_probs=124.8
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+.+|+.+|.+.+.+. +|++++++++ +++++||.|+...|||.|+.++..|+++..++
T Consensus 15 ~~~~~~G~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~ 74 (167)
T 2jsy_A 15 GQEVKVGDQAPDFTVLTN-------------------SLEEKSLADM-KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL 74 (167)
T ss_dssp SCCCCTTSCCCCCEEEBT-------------------TCCEEEHHHH-TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH
T ss_pred cCccCCCCcCCceEEECC-------------------CCCEeeHHHh-CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc
Confidence 345678888996666544 4999999997 67899999999888999999999999999988
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeec-cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYD-QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsD-p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
.|+++|+|+.++++. ++.|.+ ..+ +|++++| ++..++++||+.. . +
T Consensus 75 --~~~~vv~is~d~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~-----------~-~---------------- 123 (167)
T 2jsy_A 75 --GDVNVYTISADLPFA-QARWCGANGIDKVETLSDHRDMSFGEAFGVYI-----------K-E---------------- 123 (167)
T ss_dssp --SSCEEEEEECSSGGG-TSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB-----------T-T----------------
T ss_pred --CCCEEEEEECCCHHH-HHHHHHhcCCCCceEeeCCchhHHHHHhCCcc-----------c-c----------------
Confidence 799999999988764 677775 677 8999999 9999999999841 0 1
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
.+...|.+||||++| +|++.|.+.+..+++++++++++++++.
T Consensus 124 ----~g~~~p~~~lid~~G-~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 124 ----LRLLARSVFVLDENG-KVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp ----TCSBCCEEEEECTTS-CEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ----CCceeeEEEEEcCCC-cEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 122468999999997 8999999998999999999999998764
No 37
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.78 E-value=1.2e-18 Score=162.33 Aligned_cols=152 Identities=13% Similarity=0.134 Sum_probs=123.9
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCC--ceechhhccCCCEEEEeecCCCCcchH-HHHHHHHhccchh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTP--PMKALELWRESPAVLLCIRRPGCIMCR-AEAHQLYAKKPIF 276 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~--~VsLsdL~~~~pvVLvFyRg~gCP~Cn-~el~~Ls~~~peL 276 (416)
+.+|+.+|.|.|++. . .|+ +++|+++++++++||.||+..|||.|+ .++..|++++++|
T Consensus 3 ~~~G~~aP~f~l~~~-----~-------------~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~ 64 (241)
T 1nm3_A 3 SMEGKKVPQVTFRTR-----Q-------------GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVF 64 (241)
T ss_dssp CCTTSBCCCCEEEEE-----E-------------TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHH
T ss_pred ccCCCCCCCeEEEcc-----c-------------CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHH
Confidence 467888997766554 1 266 899999778889999999999999999 9999999999999
Q ss_pred hhcCC-eEEEEecCChhhHHhhhcC-CCCC-ceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 277 DALGI-QLFAVLHEYIESEVKDFWP-RYWG-GVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 277 ~alGV-~LVaIspEs~~~~ik~F~~-~~l~-f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
++.|+ ++|+|+.++++. ++.|.+ +.++ |++++|++.+++++||+... +.. .|+.
T Consensus 65 ~~~~~~~vv~is~d~~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~------------~~~---------~g~~- 121 (241)
T 1nm3_A 65 KKYGVDDILVVSVNDTFV-MNAWKEDEKSENISFIPDGNGEFTEGMGMLVG------------KED---------LGFG- 121 (241)
T ss_dssp HHTTCCEEEEEESSCHHH-HHHHHHHTTCTTSEEEECTTSHHHHHTTCEEE------------CTT---------TTCC-
T ss_pred HHCCCCEEEEEEcCCHHH-HHHHHHhcCCCceEEEECCCcHHHHHhCceee------------ccc---------ccCc-
Confidence 99999 999999988764 788875 6676 99999999999999998520 000 0110
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCC----CCHHHHHHHHHh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDW----APLAEVIEICTQ 399 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDr----ad~~eVLaAlk~ 399 (416)
....|++||| ++| +|+|.|++.+...+ .+++++|++++.
T Consensus 122 -----~~~~p~t~li-~~G-~i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 122 -----KRSWRYSMLV-KNG-VVEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp -----EEECCEEEEE-ETT-EEEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred -----ccceeEEEEE-ECC-EEEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 1246899999 886 99999999888766 789999998875
No 38
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.77 E-value=3.8e-18 Score=159.40 Aligned_cols=158 Identities=15% Similarity=0.097 Sum_probs=122.4
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+..|+.+|.|.+++.. .+| +|+++++..++++||+||...|||.|+.++.+|++++++|++.
T Consensus 3 l~iG~~aP~F~l~~~~-----------------~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~ 64 (220)
T 1xcc_A 3 YHLGATFPNFTAKASG-----------------IDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL 64 (220)
T ss_dssp CCTTCBCCCCEECBTT-----------------CSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT
T ss_pred CCCCCCCCCcEeeccc-----------------CCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 4678889966665441 138 8999997544579999999999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC--------CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 280 GIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 280 GV~LVaIspEs~~~~ik~F~~--------~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
|+++|+|+.++... ++.|.+ ..++|++++|++++++++||+.. +.. .
T Consensus 65 ~v~vi~vS~D~~~~-~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~-------------~~~-----------~ 119 (220)
T 1xcc_A 65 NCKLIGFSCNSKES-HDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMD-------------EQE-----------K 119 (220)
T ss_dssp TEEEEEEESSCHHH-HHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEE-------------EEE-----------E
T ss_pred CCEEEEEeCCCHHH-HHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCC-------------ccc-----------c
Confidence 99999999988764 455543 57899999999999999999841 000 0
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
. -.|.....|++||||++| +|++.+.......+ +.++|++++++++...
T Consensus 120 ~--~~g~~~~~p~~flID~~G-~I~~~~~~~~~~g~-~~~ell~~i~~lq~~~ 168 (220)
T 1xcc_A 120 D--ITGLPLTCRCLFFISPEK-KIKATVLYPATTGR-NAHEILRVLKSLQLTY 168 (220)
T ss_dssp C--TTSCEEECEEEEEECTTS-BEEEEEEECTTBCC-CHHHHHHHHHHHHHHH
T ss_pred c--CCCCCcccceEEEECCCC-EEEEEEecCCCCCC-CHHHHHHHHHHHHhhh
Confidence 0 012224579999999997 89999987644333 8899999999987543
No 39
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.77 E-value=3.7e-18 Score=158.42 Aligned_cols=155 Identities=15% Similarity=0.085 Sum_probs=124.7
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.|.|+++. +.+|++|+++++ +++++||.|++..||+.|+.++..|++++.+++
T Consensus 38 ~~l~~G~~aP~f~l~~~~----------------d~~G~~v~l~~~-~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~ 100 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVI----------------NGEFKEICLKDY-RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFN 100 (222)
T ss_dssp --CCSSEECCCCEEEEEE----------------TTEEEEEEGGGG-TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHH
T ss_pred ccccCCCCCCCeEEeccc----------------CCCCcEEeHHHh-CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 356889999966665441 224799999996 778999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++.+. .+.|.+ . .++|++++|++..++++||+.. . .
T Consensus 101 ~~~v~vv~Is~D~~~~-~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~-----------~-~------------ 155 (222)
T 3ztl_A 101 SRNCQVIACSTDSQYS-HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFD-----------E-E------------ 155 (222)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBC-----------T-T------------
T ss_pred HCCCEEEEEECCCHHH-HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCee-----------c-C------------
Confidence 9999999999988654 566654 2 7899999999999999999841 0 0
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
.+...|.+||||++| +|+|.|......+ ..+++++++++.++..+
T Consensus 156 --------~g~~~P~~~lID~~G-~I~~~~~g~~~~~-~~~~~il~~l~~l~~~~ 200 (222)
T 3ztl_A 156 --------DGNAFRGLFIIDPNG-ILRQITINDKPVG-RSVDETLRLLDAFQFVE 200 (222)
T ss_dssp --------TSSBCEEEEEECTTS-EEEEEEEECTTBC-CCHHHHHHHHHHHHHHH
T ss_pred --------CCCccceEEEECCCC-eEEEEEecCCCCC-CCHHHHHHHHHHhhccc
Confidence 123468999999997 9999999876543 34899999999887553
No 40
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.76 E-value=8.1e-18 Score=152.78 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=124.3
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccch
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPI 275 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~pe 275 (416)
..+.+|+.+|.|.+++.. .+| ++++++++ +++++||.|++..|||.|+.++..|.++..+
T Consensus 4 ~~~~~G~~aP~f~l~~~~-----------------~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~ 65 (202)
T 1uul_A 4 GEAEDLHPAPDFNETALM-----------------PNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTEICQFSDRVKE 65 (202)
T ss_dssp CCCCTTSBCCCCEEEEEC-----------------TTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHHHHHHHHTHHH
T ss_pred ccccCCCcCCCcEeeeee-----------------cCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHHHHHHHHHHHH
Confidence 356788999976665541 025 89999996 6789999999999999999999999999999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Q 014901 276 FDALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRAR 347 (416)
Q Consensus 276 L~alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~ 347 (416)
+++.|+++|+|+.++.+. ++.|.+ . .++|++++|++..++++||+.. .+
T Consensus 66 ~~~~~v~vi~Is~D~~~~-~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~------------~~---------- 122 (202)
T 1uul_A 66 FSDIGCEVLACSMDSEYS-HLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLK------------EE---------- 122 (202)
T ss_dssp HHTTTEEEEEEESSCHHH-HHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEE------------TT----------
T ss_pred HHHCCCEEEEEeCCCHHH-HHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCcc------------CC----------
Confidence 999999999999988764 677764 3 6899999999999999999841 00
Q ss_pred hcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 348 TLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 348 ~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
++...|++||||++| +|++.+.+... ...+.++++++++.++..
T Consensus 123 ----------~g~~~P~~~lid~~G-~i~~~~~g~~~-~~~~~~ell~~l~~l~~~ 166 (202)
T 1uul_A 123 ----------DGVAYRGLFIIDPKQ-NLRQITVNDLP-VGRDVDEALRLVKAFQFV 166 (202)
T ss_dssp ----------TTEECEEEEEECTTS-BEEEEEEECTT-BCCCHHHHHHHHHHHHHH
T ss_pred ----------CCceeeEEEEECCCC-EEEEEEeCCCC-CCCCHHHHHHHHHHhhhh
Confidence 123578999999996 89999987643 335789999999988743
No 41
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.76 E-value=6.4e-18 Score=152.38 Aligned_cols=158 Identities=14% Similarity=0.097 Sum_probs=125.2
Q ss_pred CCCCCCCCCcccccccc---ccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhcc
Q 014901 199 PPVNEKVAPYSAIENIS---IQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKK 273 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~---l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~ 273 (416)
.+.+|+.+|.|.+++.. ..+++.. +.+| ++++++++ +++++||.|+|..|||.|+.++..|.+++
T Consensus 3 ~l~~G~~~P~f~l~~~~~~~~~~~~~~---------~~~G~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~ 72 (195)
T 2bmx_A 3 LLTIGDQFPAYQLTALIGGDLSKVDAK---------QPGDYFTTITSDEH-PGKWRVVFFWPKDFTFVCPTEIAAFSKLN 72 (195)
T ss_dssp BCCTTCBCCCCEEEEECSSCGGGSCCS---------SGGGGEEEEETTSS-TTCEEEEEECSCTTSCCCHHHHHHHHHTH
T ss_pred cCCCCCcCCCcCccccccccccccccc---------ccCCCccEeeHHHh-CCCcEEEEEEcCCCCCCcHHHHHHHHHHH
Confidence 35788899988776663 1111110 1126 89999997 67899999999999999999999999999
Q ss_pred chhhhcCCeEEEEecCChhhHHhhhcC-C----CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 014901 274 PIFDALGIQLFAVLHEYIESEVKDFWP-R----YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 348 (416)
Q Consensus 274 peL~alGV~LVaIspEs~~~~ik~F~~-~----~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~ 348 (416)
.++.+.|+++|+|+.++.+. ++.|.+ . .++|++++|++..++++||+.. .
T Consensus 73 ~~~~~~~v~vv~Vs~d~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-------------~----------- 127 (195)
T 2bmx_A 73 DEFEDRDAQILGVSIDSEFA-HFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLN-------------A----------- 127 (195)
T ss_dssp HHHHTTTEEEEEEESSCHHH-HHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBC-------------T-----------
T ss_pred HHHHHCCCEEEEEECCCHHH-HHHHHHHhccccCCceeEEeCCchHHHHHhCCcc-------------c-----------
Confidence 99999999999999988664 777775 4 7899999999999999999841 0
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 349 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 349 ~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
++...|.+||||++| +|++.|.+..... .++++|+++++.+..
T Consensus 128 ---------~g~~~P~~~lid~~G-~i~~~~~g~~~~~-~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 128 ---------DGVADRVTFIVDPNN-EIQFVSATAGSVG-RNVDEVLRVLDALQS 170 (195)
T ss_dssp ---------TSSBCEEEEEECTTS-BEEEEEEECTTCC-CCHHHHHHHHHHHHC
T ss_pred ---------CCCccceEEEEcCCC-eEEEEEecCCCCC-CCHHHHHHHHHHHhh
Confidence 013468999999996 8999998875433 378999999998864
No 42
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.75 E-value=3.4e-18 Score=148.60 Aligned_cols=146 Identities=13% Similarity=0.142 Sum_probs=114.9
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCC-CEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRES-PAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~-pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.+.+|+.+|.|.|++. +|++|+++++..++ ++||.||+..|||.|+.++..|.+++.+++
T Consensus 6 ~~~~G~~~P~f~l~~~-------------------~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~ 66 (159)
T 2a4v_A 6 ELEIGDPIPDLSLLNE-------------------DNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELK 66 (159)
T ss_dssp CCCTTCBCCSCEEECT-------------------TSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCeEEECC-------------------CCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5678888997666554 49999999987655 577888899999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 356 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~ 356 (416)
+.| ++|+|+.++++. ++.|.+ .+++|++++|++..++++||+.. .| ..
T Consensus 67 ~~~-~vv~is~d~~~~-~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~------------~p-----------------~~ 115 (159)
T 2a4v_A 67 EYA-AVFGLSADSVTS-QKKFQSKQNLPYHLLSDPKREFIGLLGAKK------------TP-----------------LS 115 (159)
T ss_dssp TTC-EEEEEESCCHHH-HHHHHHHHTCSSEEEECTTCHHHHHHTCBS------------SS-----------------SS
T ss_pred hCC-cEEEEeCCCHHH-HHHHHHHhCCCceEEECCccHHHHHhCCcc------------cc-----------------cC
Confidence 999 999999998764 788875 67899999999999999999851 12 01
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 357 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 357 GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
| ..|.+||| ++| +|++.|.+..... +.+++++.+..+.
T Consensus 116 g---~~~~~~li-~~G-~i~~~~~g~~~~~--~~~~~~~~l~~~l 153 (159)
T 2a4v_A 116 G---SIRSHFIF-VDG-KLKFKRVKISPEV--SVNDAKKEVLEVA 153 (159)
T ss_dssp C---BCCEEEEE-ETT-EEEEEEESCCHHH--HHHHHHHHHHHHH
T ss_pred C---ccceEEEE-cCC-EEEEEEccCCccc--cHHHHHHHHHHHH
Confidence 1 36799999 996 8999998654332 3355555555443
No 43
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.73 E-value=2.7e-17 Score=148.38 Aligned_cols=151 Identities=11% Similarity=0.058 Sum_probs=122.5
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCCC---ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTP---PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~---~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
++|+.+|.|.+++.. .+|+ +++++++++++++||.|+|..|||.|+.++..|.++..++.
T Consensus 2 ~~G~~~P~f~l~~~~-----------------~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~ 64 (198)
T 1zof_A 2 VVTKLAPDFKAPAVL-----------------GNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFH 64 (198)
T ss_dssp CTTSBCCCCEEEEEC-----------------TTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHH
T ss_pred CCCCcCCceEeeccc-----------------CCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 467888866554430 1388 99999986888999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC--------CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP--------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~--------~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++++. ++.|.+ +.++|++++|++..++++||+.. ..
T Consensus 65 ~~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-------------~~----------- 119 (198)
T 1zof_A 65 EKGFNVIGVSIDSEQV-HFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLF-------------EE----------- 119 (198)
T ss_dssp HTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEE-------------TT-----------
T ss_pred HcCCEEEEEECCCHHH-HHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcc-------------cC-----------
Confidence 9999999999988764 677764 46899999999999999999841 00
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
+...|.+||||++| +|++.|.+. .....+.++|+++++.++...
T Consensus 120 ---------g~~~P~~~lid~~G-~i~~~~~g~-~~~~~~~~~l~~~l~~l~~~~ 163 (198)
T 1zof_A 120 ---------AIALRGAFLIDKNM-KVRHAVIND-LPLGRNADEMLRMVDALLHFE 163 (198)
T ss_dssp ---------TEECEEEEEEETTT-EEEEEEEES-SSCCCHHHHHHHHHHHHHHHH
T ss_pred ---------CcccceEEEECCCC-EEEEEEecC-CCCCCCHHHHHHHHHHHHHhh
Confidence 13468999999996 899999875 333457899999999887544
No 44
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.73 E-value=4.6e-17 Score=146.97 Aligned_cols=150 Identities=15% Similarity=0.072 Sum_probs=122.0
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCC--CceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKT--PPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G--~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
+.+|+.+|.|.+++. . +| ++++++++ +++++||.|++..|||.|+.++..|.++..+++
T Consensus 5 l~~G~~aP~f~l~~~-----~-------------~g~~~~v~l~~~-~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~ 65 (197)
T 1qmv_A 5 ARIGKPAPDFKATAV-----V-------------DGAFKEVKLSDY-KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFR 65 (197)
T ss_dssp BCTTSBCCCCEEEEE-----E-------------TTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHH
T ss_pred ccCCCCCCCeEeEee-----c-------------CCCccEEEHHHH-CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 467888886665544 0 25 89999995 778999999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-C-------CCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-R-------YWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~-------~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
+.|+++|+|+.++.+. .++|.+ . .++|++++|++..++++||+.. .+
T Consensus 66 ~~~v~vv~Is~d~~~~-~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~------------~~------------ 120 (197)
T 1qmv_A 66 KLGCEVLGVSVDSQFT-HLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLK------------TD------------ 120 (197)
T ss_dssp TTTEEEEEEESSCHHH-HHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEE------------TT------------
T ss_pred HCCCEEEEEECCCHHH-HHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCcc------------CC------------
Confidence 9999999999988764 666664 2 7899999999999999999841 01
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
.+...|++||||++| +|++.+.+.... ..++++++++++.++..
T Consensus 121 --------~~~~~P~~~lid~~G-~i~~~~~g~~~~-~~~~~e~l~~l~~l~~~ 164 (197)
T 1qmv_A 121 --------EGIAYRGLFIIDGKG-VLRQITVNDLPV-GRSVDEALRLVQAFQYT 164 (197)
T ss_dssp --------TTEECEEEEEECTTS-BEEEEEEECTTB-CCCHHHHHHHHHHHHHH
T ss_pred --------CCceeeEEEEECCCC-cEEEEEeCCCCC-CCCHHHHHHHHHhcchh
Confidence 123578999999996 899999886433 45889999999988643
No 45
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.71 E-value=7.8e-17 Score=154.58 Aligned_cols=150 Identities=15% Similarity=0.066 Sum_probs=120.5
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceec-hhhc-cCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKA-LELW-RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsL-sdL~-~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
+..|+.+|.|.+++. +| ++++ ++++ +++++||+||...|||.|..++..|++++++|+
T Consensus 5 ~~iG~~aPdF~l~~~-------------------~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~ 64 (249)
T 3a2v_A 5 PLIGERFPEMEVTTD-------------------HG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQ 64 (249)
T ss_dssp CCTTSBCCCEEEEET-------------------TE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCCeEEEcC-------------------CC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHH
Confidence 467888997766554 37 7999 9976 667788999999999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-------CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-------RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 350 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-------~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G 350 (416)
+.|+++|+|+.++... +..|.+ ..++|++++|++++++++||+.. +. .
T Consensus 65 ~~gv~VI~VS~Ds~~~-~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~-------------~~----------~- 119 (249)
T 3a2v_A 65 RLGVDLIGLSVDSVFS-HIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLH-------------AE----------S- 119 (249)
T ss_dssp HTTEEEEEEESSCHHH-HHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCC-------------TT----------C-
T ss_pred hCCcEEEEEECCCHHH-HHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCcc-------------cc----------C-
Confidence 9999999999988764 444442 47899999999999999999841 11 0
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 351 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 351 ~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
| ....|++||||++| +|++.+.+..... .+.++|++++++++..
T Consensus 120 ------g-~~~~p~~fIID~dG-~I~~~~~~~~~~g-r~~~Ellr~I~alq~~ 163 (249)
T 3a2v_A 120 ------A-THTVRGVFIVDARG-VIRTMLYYPMELG-RLVDEILRIVKALKLG 163 (249)
T ss_dssp ------S-SSCCEEEEEECTTS-BEEEEEEECTTBC-CCHHHHHHHHHHHHHH
T ss_pred ------C-CcccceEEEECCCC-eEEEEEecCCccc-chhHHHHHHHHHHHhc
Confidence 1 12478999999996 8999998765433 3789999999988753
No 46
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.68 E-value=2.5e-16 Score=134.07 Aligned_cols=140 Identities=16% Similarity=0.175 Sum_probs=109.7
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG 280 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alG 280 (416)
.+|+.+|.+.+.+. +|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++...+
T Consensus 3 ~~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~ 61 (154)
T 3kcm_A 3 LEENPAPDFTLNTL-------------------NGEVVKLSDL-KGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKP 61 (154)
T ss_dssp CTTSBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSS
T ss_pred CCCCCCCCeEEEcC-------------------CCCEEehhhc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCC
Confidence 57788885555544 4999999996 6677777777 8999999999999999999999999
Q ss_pred CeEEEEecCCh-hhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC
Q 014901 281 IQLFAVLHEYI-ESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE 358 (416)
Q Consensus 281 V~LVaIspEs~-~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD 358 (416)
+.+|+|+.+.. ...++.|.. ..++|+++.|++..+++.||+.
T Consensus 62 ~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------------ 105 (154)
T 3kcm_A 62 FRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT------------------------------------ 105 (154)
T ss_dssp EEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC------------------------------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC------------------------------------
Confidence 99999998764 334677775 7789999999999999988874
Q ss_pred CcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 359 GEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 359 ~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
..|.+||||++| +|++.+.+....+. +++.+.++++...
T Consensus 106 --~~P~~~lid~~G-~i~~~~~g~~~~~~---~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 106 --GVPETFVIDRHG-VILKKVVGAMEWDH---PEVIAFLNNELSK 144 (154)
T ss_dssp --SBCEEEEECTTS-BEEEEEESCCCTTS---HHHHHHHHTC---
T ss_pred --CCCeEEEECCCC-cEEEEEcCCCcccc---HHHHHHHHHHHHH
Confidence 146899999996 89999988765554 4555555555433
No 47
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.66 E-value=8.8e-16 Score=130.85 Aligned_cols=131 Identities=13% Similarity=0.109 Sum_probs=103.6
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccc
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 312 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~ 312 (416)
+|+.++++++ +++++||.|+ ..|||.|+.++..|.++..++...|+.+|+|+.+.....++.|.+ .+++|+++.|++
T Consensus 15 ~g~~~~l~~~-~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~ 92 (151)
T 2f9s_A 15 NGKRIELSDL-KGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTD 92 (151)
T ss_dssp TCCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETT
T ss_pred CCCEEEHHHc-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCc
Confidence 4999999997 6777777777 899999999999999999999888999999997554344777775 778999999999
Q ss_pred hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHH
Q 014901 313 MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAE 392 (416)
Q Consensus 313 r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~e 392 (416)
..+++.||+. ..|.+||||++| +|++.+.+. .+.++
T Consensus 93 ~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~~G~-----~~~~~ 128 (151)
T 2f9s_A 93 RQVLDAYDVS--------------------------------------PLPTTFLINPEG-KVVKVVTGT-----MTESM 128 (151)
T ss_dssp SHHHHHTTCC--------------------------------------SSCEEEEECTTS-EEEEEEESC-----CCHHH
T ss_pred hHHHHhcCCC--------------------------------------CCCeEEEECCCC-cEEEEEeCC-----CCHHH
Confidence 9999988773 136899999996 899888754 46889
Q ss_pred HHHHHHhhhhhhcccccc
Q 014901 393 VIEICTQLQDQQRDQSET 410 (416)
Q Consensus 393 VLaAlk~l~~~~~~~~~~ 410 (416)
+.+.++.+.+.....++.
T Consensus 129 l~~~l~~ll~~~~~~~~~ 146 (151)
T 2f9s_A 129 IHDYMNLIKPGETSGLEH 146 (151)
T ss_dssp HHHHHHHHSCC-------
T ss_pred HHHHHHHHHhhhhccccc
Confidence 999998887666555544
No 48
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.65 E-value=1e-15 Score=129.93 Aligned_cols=138 Identities=17% Similarity=0.073 Sum_probs=109.5
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+.+|+.+|.+.+.+ +|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++.+.
T Consensus 3 l~~G~~~P~f~l~~--------------------~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~ 60 (152)
T 3gl3_A 3 LDKGDKAPDFALPG--------------------KTGVVKLSDK-TGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAK 60 (152)
T ss_dssp CCTTSBCCCCEEEB--------------------SSSEEEGGGG-TTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCCCcCCceEeeC--------------------CCCeEeHHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcC
Confidence 56788888554433 3889999996 6667777776 999999999999999999999999
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC
Q 014901 280 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE 358 (416)
Q Consensus 280 GV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD 358 (416)
|+++|+|+.+.....++.|.. ..++|+++.|++..+++.||+.
T Consensus 61 ~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------------ 104 (152)
T 3gl3_A 61 GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK------------------------------------ 104 (152)
T ss_dssp TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC------------------------------------
T ss_pred CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC------------------------------------
Confidence 999999998754444677765 7889999999999999988873
Q ss_pred CcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 359 GEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 359 ~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|.+||||++| +|++.+.+.... +.+++.+.++++.
T Consensus 105 --~~P~~~lid~~G-~i~~~~~g~~~~---~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 105 --GMPTSFLIDRNG-KVLLQHVGFRPA---DKEALEQQILAAL 141 (152)
T ss_dssp --SSSEEEEECTTS-BEEEEEESCCTT---THHHHHHHHHHHT
T ss_pred --CCCeEEEECCCC-CEEEEEccCCCc---CHHHHHHHHHHHH
Confidence 146899999996 899999876443 4566666666554
No 49
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.64 E-value=1.2e-15 Score=130.75 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=110.0
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+.+|+.+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++.+.
T Consensus 3 l~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~ 61 (152)
T 2lrn_A 3 LATGSVAPAITGIDL-------------------KGNSVSLNDF-KGKYVLVDFW-FAGCSWCRKETPYLLKTYNAFKDK 61 (152)
T ss_dssp SCTTEECCCCEEECS-------------------SSCEEESGGG-TTSEEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCcCCCceeEcC-------------------CCCEEeHHHc-CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhccC
Confidence 456777885555544 4999999996 6677777777 899999999999999999999988
Q ss_pred CCeEEEEecCChhhHHhhhcC-CCCCceeeecc---chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 280 GIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ---GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 280 GV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp---~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
|+++|+|+.+.....++.|.. ..++|++++|+ +..++++||+.
T Consensus 62 ~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--------------------------------- 108 (152)
T 2lrn_A 62 GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV--------------------------------- 108 (152)
T ss_dssp TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC---------------------------------
T ss_pred CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC---------------------------------
Confidence 999999998754444666664 67899999999 67888877763
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccc
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQS 408 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~~~~~ 408 (416)
..|.+||||++| +|++.+. ..+++.+.++.+..+..+++
T Consensus 109 -----~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~~l~~~~~~~~ 147 (152)
T 2lrn_A 109 -----GFPHIILVDPEG-KIVAKEL--------RGDDLYNTVEKFVNGAKEGH 147 (152)
T ss_dssp -----SSCEEEEECTTS-EEEEECC--------CTTHHHHHHHHHHTSSSSCC
T ss_pred -----cCCeEEEECCCC-eEEEeeC--------CHHHHHHHHHHHHhhccccc
Confidence 136899999996 8999874 23577777777766655544
No 50
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.64 E-value=3e-15 Score=133.12 Aligned_cols=146 Identities=16% Similarity=0.127 Sum_probs=115.0
Q ss_pred CCCCCCCCCCccccc-cccccccchhhhccccccccCCCCceechhhccCCC-EEEEeecCCCCcchHHHHHHHHhccch
Q 014901 198 APPVNEKVAPYSAIE-NISIQKLTPEYKIGMERLVKTKTPPMKALELWRESP-AVLLCIRRPGCIMCRAEAHQLYAKKPI 275 (416)
Q Consensus 198 ~a~~~~~~apl~~L~-d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~p-vVLvFyRg~gCP~Cn~el~~Ls~~~pe 275 (416)
..+.+|+.+|.+.+. +. +|++++++++ ++++ +||.| ...|||.|+.++..|.++..+
T Consensus 16 ~~~~~g~~~p~f~l~~~~-------------------~G~~~~l~~~-~gk~~vlv~F-~a~~C~~C~~~~~~l~~l~~~ 74 (196)
T 2ywi_A 16 NMFPLGKQAPPFALTNVI-------------------DGNVVRLEDV-KSDAATVIMF-ICNHCPFVKHVQHELVRLAND 74 (196)
T ss_dssp CCCCTTCBCCCCEEEETT-------------------TCCEEEHHHH-CCSSEEEEEE-CCSSCHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCcCCceeeeecC-------------------CCCEEeHHHh-CCCCeEEEEE-eCCCCccHHHHHHHHHHHHHH
Confidence 456788888866665 54 4999999996 5555 55555 588999999999999999999
Q ss_pred hhhcCCeEEEEec--------CChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHH
Q 014901 276 FDALGIQLFAVLH--------EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRA 346 (416)
Q Consensus 276 L~alGV~LVaIsp--------Es~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA 346 (416)
+.+.|+.+|+|+. ++.+. ++.|.+ ..++|+++.|++..++++||+.
T Consensus 75 ~~~~~v~vv~v~~d~~~~~~~d~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------ 129 (196)
T 2ywi_A 75 YMPKGVSFVAINSNDAEQYPEDSPEN-MKKVAEELGYPFPYLYDETQEVAKAYDAA------------------------ 129 (196)
T ss_dssp HGGGTCEEEEEECSCTTTCGGGSHHH-HHHHHHHHTCCSCEEECSSCHHHHHHTCC------------------------
T ss_pred HHhCCcEEEEEECCccccccccCHHH-HHHHHHHcCCCceEEECCchHHHHHhCCC------------------------
Confidence 9999999999997 44543 777775 6789999999999999988873
Q ss_pred HhcCCccccCCCCcccceEEEEecCCCcEEEEEecCC----CCCCCCHHHHHHHHHhhhhhh
Q 014901 347 RTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERN----FGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 347 ~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d----~gDrad~~eVLaAlk~l~~~~ 404 (416)
..|.+||||++| +|+|.+...+ +....+.+++.++++.+....
T Consensus 130 --------------~~P~~~lid~~G-~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 130 --------------CTPDFYIFDRDL-KCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp --------------EESEEEEEETTC-BEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred --------------CCCeEEEEcCCC-eEEEccccCcccccccCccCHHHHHHHHHHHHcCC
Confidence 136799999997 8999877554 234457789999988876544
No 51
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.63 E-value=4e-15 Score=126.45 Aligned_cols=143 Identities=15% Similarity=0.236 Sum_probs=112.9
Q ss_pred CCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc
Q 014901 200 PVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL 279 (416)
Q Consensus 200 ~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al 279 (416)
+.+|+.+|.+.+.+. +|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++...
T Consensus 2 ~~~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~ 60 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDL-------------------HGKTVSNADL-QGKVTLINFW-FPSCPGCVSEMPKIIKTANDYKNK 60 (153)
T ss_dssp --CCTTCCSCEEECT-------------------TSCEEEHHHH-TTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGT
T ss_pred CCCCCCCCCcEeecC-------------------CCCCccHHHh-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhccC
Confidence 356777885555444 4999999996 7777777777 789999999999999999999989
Q ss_pred CCeEEEEec--CChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 014901 280 GIQLFAVLH--EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 356 (416)
Q Consensus 280 GV~LVaIsp--Es~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~ 356 (416)
|+.+|+|+. ++.+ .++.|.+ ..++|+++.|++..+.+.||+..
T Consensus 61 ~~~vv~v~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~--------------------------------- 106 (153)
T 2l5o_A 61 NFQVLAVAQPIDPIE-SVRQYVKDYGLPFTVMYDADKAVGQAFGTQV--------------------------------- 106 (153)
T ss_dssp TEEEEEEECTTSCHH-HHHHHHHHTTCCSEEEECSSCHHHHHHTCCS---------------------------------
T ss_pred CeEEEEEecCCCCHH-HHHHHHHHcCCCceEEcCchHHHHHHcCCCc---------------------------------
Confidence 999999994 4444 3677775 78899999999999999888730
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhcccc
Q 014901 357 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQS 408 (416)
Q Consensus 357 GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~~~~~ 408 (416)
.|.+||||++| +|++.+.+. .+.+++++.++.+.....+.+
T Consensus 107 -----~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~ll~~~~~~~ 147 (153)
T 2l5o_A 107 -----YPTSVLIGKKG-EILKTYVGE-----PDFGKLYQEIDTAWRNSDAEG 147 (153)
T ss_dssp -----SSEEEEECSSS-CCCEEEESS-----CCHHHHHHHHHHHHHCCSSCC
T ss_pred -----cCeEEEECCCC-cEEEEEcCC-----CCHHHHHHHHHHHHHhhhhcc
Confidence 36899999996 888888753 678999999988765554433
No 52
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.63 E-value=3e-15 Score=138.01 Aligned_cols=147 Identities=16% Similarity=0.138 Sum_probs=115.0
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.|.|.+. +|++++++++ +++++||++|-..|||.|+.++..|.++..++.
T Consensus 30 ~~l~~G~~aP~f~l~~~-------------------~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 89 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDA-------------------GGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYA 89 (218)
T ss_dssp CCCCTTCBCCCCCEECT-------------------TCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHT
T ss_pred CcCCCCCcCCCcEeECC-------------------CCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHH
Confidence 35678999997666654 4999999996 556644444445999999999999999999999
Q ss_pred hcCCeEEEEec--------CChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 014901 278 ALGIQLFAVLH--------EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 348 (416)
Q Consensus 278 alGV~LVaIsp--------Es~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~ 348 (416)
+.|+.+|+|+. ++++ .++.|.+ ..++|++++|++..++++||+..
T Consensus 90 ~~~v~vv~Vs~d~~~~~~~d~~~-~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~------------------------- 143 (218)
T 3u5r_E 90 GQGLAVVAINSNDAQAFPEETLE-RVGAEVKAYGYGFPYLKDASQSVAKAYGAAC------------------------- 143 (218)
T ss_dssp TTTEEEEEEECSCTTTCGGGSHH-HHHHHHHHHTCCSCEEECTTCHHHHHHTCCE-------------------------
T ss_pred hCCcEEEEEECCcccccccCCHH-HHHHHHHHhCCCccEEECCccHHHHHcCCCC-------------------------
Confidence 99999999998 4555 3777775 78899999999999999998741
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCC----CCCCCHHHHHHHHHhhhhhh
Q 014901 349 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNF----GDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 349 ~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~----gDrad~~eVLaAlk~l~~~~ 404 (416)
.|.+||||++| +|+|...-.+. ...+..++|.++++.+...+
T Consensus 144 -------------~P~~~liD~~G-~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 144 -------------TPDFFLYDRER-RLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp -------------ESEEEEECTTC-BEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred -------------CCeEEEECCCC-cEEEeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 26899999997 89887654322 33456788888888876544
No 53
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.62 E-value=4.7e-15 Score=124.81 Aligned_cols=133 Identities=9% Similarity=0.094 Sum_probs=103.4
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh---ccchhh
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA---KKPIFD 277 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~---~~peL~ 277 (416)
++|+.+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.+ +..++.
T Consensus 2 ~~G~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~ 60 (142)
T 3ewl_A 2 NAGMKAADFTYVTV-------------------HGDNSRMSRL-KAQYTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVE 60 (142)
T ss_dssp CTTSBCCCCEEECT-------------------TCCEEEGGGC-CCSEEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHH
T ss_pred CCCCcCCCCEEECC-------------------CCCEEEhhhc-CCCEEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhc
Confidence 57888996666554 4999999996 6666666666 8999999999999888 788898
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHH--HhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFK--ALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 354 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYk--ALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn 354 (416)
+.|+.+|+|+.+.....++.|.+ ..++|+++.|++..+.. .||+.
T Consensus 61 ~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~-------------------------------- 108 (142)
T 3ewl_A 61 NGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIR-------------------------------- 108 (142)
T ss_dssp HTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCC--------------------------------
T ss_pred cCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCC--------------------------------
Confidence 89999999998754444777775 78999999999988866 44432
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 355 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 355 ~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|.+||||++| +|++. ..+.+++.+.++.+.
T Consensus 109 ------~~P~~~lid~~G-~i~~~--------~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 109 ------ATPTIYLLDGRK-RVILK--------DTSMEQLIDYLATQA 140 (142)
T ss_dssp ------SSSEEEEECTTC-BEEEC--------SCCHHHHHHHHHC--
T ss_pred ------CCCeEEEECCCC-CEEec--------CCCHHHHHHHHHHHc
Confidence 147899999997 88872 367788888877654
No 54
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.62 E-value=4e-15 Score=129.36 Aligned_cols=158 Identities=9% Similarity=0.055 Sum_probs=117.4
Q ss_pred CCCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCc-chHHHHHHHHhccc
Q 014901 196 IQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCI-MCRAEAHQLYAKKP 274 (416)
Q Consensus 196 ~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP-~Cn~el~~Ls~~~p 274 (416)
....+.+|+.+|.+.|.+. +|++++++++ +++++||.|+ ..||| .|+.++..|.++..
T Consensus 3 ~~~~l~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~ 61 (174)
T 1xzo_A 3 QQIKDPLNYEVEPFTFQNQ-------------------DGKNVSLESL-KGEVWLADFI-FTNCETICPPMTAHMTDLQK 61 (174)
T ss_dssp CCCCSCCCEECCCCEEECT-------------------TSCEEETGGG-TTCCEEEEEE-CSCCSSCCCSHHHHHHHHHH
T ss_pred CCCcCccccccCCcEEEcC-------------------CCCEEehhhc-CCCEEEEEEE-cCCCcchhHHHHHHHHHHHH
Confidence 3456678888886666554 4999999995 7778777776 78999 99999999999999
Q ss_pred hhhhcC--CeEEEEecC----ChhhHHhhhcC-CCCCc---eeeeccchHHHHHhCCCcccccccccccccCHHHHHHHH
Q 014901 275 IFDALG--IQLFAVLHE----YIESEVKDFWP-RYWGG---VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYK 344 (416)
Q Consensus 275 eL~alG--V~LVaIspE----s~~~~ik~F~~-~~l~f---~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~ 344 (416)
++.+.| +++|+|+.+ +++ .++.|.+ ..++| ++++|++..+.++|+... +. .+ .
T Consensus 62 ~~~~~~~~~~vv~is~d~~~d~~~-~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~---~~---~~-~--------- 124 (174)
T 1xzo_A 62 KLKAENIDVRIISFSVDPENDKPK-QLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKS---FK---AI-V--------- 124 (174)
T ss_dssp HHHHTTCCCEEEEEESCTTTCCHH-HHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHH---HC---CC-C---------
T ss_pred HhhhcCCcEEEEEEEeCCCCCCHH-HHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhh---cC---ee-E---------
Confidence 999887 999999975 444 3777875 67888 899999999988876521 00 00 0
Q ss_pred HHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 345 RARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 345 rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
....+. ......|.+||||++| +|++.|.+... .+.++|++.++.+.
T Consensus 125 ----~~~~~~--~~~~~~p~~~lid~~G-~i~~~~~g~~~---~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 125 ----KKPEGE--DQVIHQSSFYLVGPDG-KVLKDYNGVEN---TPYDDIISDVKSAS 171 (174)
T ss_dssp ----CCCSSC--CSCCSCCEEEEECTTS-EEEEEEESSSS---CCHHHHHHHHHHHT
T ss_pred ----eecCCC--CeeeeeeEEEEECCCC-eEEEEEcCCCC---CCHHHHHHHHHHHH
Confidence 000000 1123468999999997 89999987643 46789999888764
No 55
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.60 E-value=3.1e-15 Score=125.58 Aligned_cols=138 Identities=20% Similarity=0.178 Sum_probs=109.8
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.+..+|+.+|.+.+.+. +|+++++.++ +++++||.|+ ..|||.|+.++..|.++..++.
T Consensus 3 ~~~~~G~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~ 61 (148)
T 3hcz_A 3 APLLLGKKAPNLYMTDT-------------------TGTYRYLYDV-QAKYTILFFW-DSQCGHCQQETPKLYDWWLKNR 61 (148)
T ss_dssp CCCCTTSBCCCCCCBCT-------------------TSCBCCGGGC-CCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHG
T ss_pred CccCCCCcCCceEEecC-------------------CCCEEEhHHc-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhc
Confidence 45678899996666554 4899999996 6666666665 8899999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCC-ceeeeccchH--HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYWG-GVVVYDQGME--FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l~-f~VLsDp~r~--lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
+.|+.+|+|+.+.....++.|.+ ..++ |+++.|++.. +.+.||+.
T Consensus 62 ~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~------------------------------- 110 (148)
T 3hcz_A 62 AKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIY------------------------------- 110 (148)
T ss_dssp GGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCC-------------------------------
T ss_pred cCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcC-------------------------------
Confidence 99999999998754445777775 6677 9999999988 88887763
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
..|.+||||++| +|++.+.+. .+++++++.+..+
T Consensus 111 -------~~P~~~lid~~G-~i~~~~~g~-----~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 111 -------ATPVLYVLDKNK-VIIAKRIGY-----ENLDDFLVQYEKS 144 (148)
T ss_dssp -------SSCEEEEECTTC-BEEEESCCG-----GGHHHHHHHHHHH
T ss_pred -------CCCEEEEECCCC-cEEEecCCH-----HHHHHHHHHHHHH
Confidence 146899999997 899887543 6778888777654
No 56
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.60 E-value=6.5e-15 Score=126.07 Aligned_cols=124 Identities=12% Similarity=0.038 Sum_probs=100.3
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHH-HHHHHhccchhhhcCCeEEEEec-------CChhhHHhhhcC-CCCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAE-AHQLYAKKPIFDALGIQLFAVLH-------EYIESEVKDFWP-RYWG 304 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~e-l~~Ls~~~peL~alGV~LVaIsp-------Es~~~~ik~F~~-~~l~ 304 (416)
.|++++++++ +++++||.|+ ..|||.|+.+ +..|.++..++...|+.+|+|+. ++.+. ++.|.+ ++++
T Consensus 17 ~g~~~~l~~~-~gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 93 (158)
T 3eyt_A 17 SATDLTLADL-RGKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPIS-LKAFLHEYRIK 93 (158)
T ss_dssp CSSCCCTGGG-TTSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHH-HHHHHHHTTCC
T ss_pred CCCccCHHHh-CCCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHH-HHHHHHHcCCC
Confidence 4899999996 6667777776 6899999997 99999999999888999999994 45554 778875 7899
Q ss_pred ceeeeccch-----HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEE
Q 014901 305 GVVVYDQGM-----EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQF 379 (416)
Q Consensus 305 f~VLsDp~r-----~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah 379 (416)
|+++.|++. .+++.||+. ..|.+||||++| +|++.+
T Consensus 94 ~~~~~d~~~~~~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~ 134 (158)
T 3eyt_A 94 FPVGVDQPGDGAMPRTMAAYQMR--------------------------------------GTPSLLLIDKAG-DLRAHH 134 (158)
T ss_dssp SCEEEECCCSSSSCHHHHHTTCC--------------------------------------SSSEEEEECTTS-EEEEEE
T ss_pred ceEEEcCccchhhHHHHHHcCCC--------------------------------------CCCEEEEECCCC-CEEEEE
Confidence 999999998 677777763 146899999996 899988
Q ss_pred ecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 380 IERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 380 ~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
.+. .+.+++.+.++.+-.+.
T Consensus 135 ~g~-----~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 135 FGD-----VSELLLGAEIATLLGEA 154 (158)
T ss_dssp ESC-----CCHHHHHHHHHHHHTSC
T ss_pred eCC-----CCHHHHHHHHHHHhccC
Confidence 864 46778888888776543
No 57
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.60 E-value=1.4e-14 Score=125.37 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=107.4
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.....++.+|.+.+.+. +|++++++++ +++++||.|+- .|||.|+.++..|.++..++.
T Consensus 7 ~~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~ 65 (152)
T 2lrt_A 7 EDKIKEASIIDIQLKDL-------------------KGNTRSLTDL-KGKVVLIDFTV-YNNAMSAAHNLALRELYNKYA 65 (152)
T ss_dssp CSSSCTTCSCCCCEEBT-------------------TSCEECTTTG-GGSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHG
T ss_pred hhhccCCCCCCeEEEcC-------------------CCCEEeHHHh-CCCEEEEEEEc-CCChhhHHHHHHHHHHHHHhc
Confidence 35567778886655544 4999999996 77888888885 799999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH---HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME---FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQN 354 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~---lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn 354 (416)
+.|+.+|+|+.+.....++.|.. .++|+++.|++.. +.++||+.
T Consensus 66 ~~~~~vv~i~~d~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~v~-------------------------------- 112 (152)
T 2lrt_A 66 SQGFEIYQISLDGDEHFWKTSAD-NLPWVCVRDANGAYSSYISLYNVT-------------------------------- 112 (152)
T ss_dssp GGTEEEEEEECSCCHHHHHHHHT-TCSSEEEECSSGGGCHHHHHHTCC--------------------------------
T ss_pred cCCeEEEEEEccCCHHHHHHHHh-CCCceEEECCCCcchHHHHHcCcc--------------------------------
Confidence 99999999998876655666664 4899999999987 88887763
Q ss_pred cCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 014901 355 FKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 398 (416)
Q Consensus 355 ~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk 398 (416)
..|.+||||++| +|++.+.+ ..++++.+..+.
T Consensus 113 ------~~P~~~lid~~G-~i~~~~~g-----~~~~e~~~~~~~ 144 (152)
T 2lrt_A 113 ------NLPSVFLVNRNN-ELSARGEN-----IKDLDEAIKKLL 144 (152)
T ss_dssp ------SCSEEEEEETTT-EEEEETTT-----CSCHHHHHHHHH
T ss_pred ------cCceEEEECCCC-eEEEecCC-----HHHHHHHHHHHH
Confidence 046899999996 89887764 356777666554
No 58
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=1.6e-14 Score=123.38 Aligned_cols=136 Identities=11% Similarity=0.008 Sum_probs=110.1
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceech--hhccCCCEEEEeecCCCCcc--hHHHHHHHHhccc
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKAL--ELWRESPAVLLCIRRPGCIM--CRAEAHQLYAKKP 274 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLs--dL~~~~pvVLvFyRg~gCP~--Cn~el~~Ls~~~p 274 (416)
...+|+.+|.+.+++. +|++++++ ++ +++++||.|+. .|||. |+.++..|.++..
T Consensus 4 ~l~~G~~~p~f~l~~~-------------------~g~~~~l~~~~~-~gk~vll~F~a-~~C~~v~C~~~~~~l~~l~~ 62 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNA-------------------KGEKITRSSDAF-KQKSLLINFWA-SWNDSISQKQSNSELREIYK 62 (150)
T ss_dssp TTSTTSBCCCCCEEBT-------------------TCCEECTTSTTT-TTSEEEEEEEC-TTCCCHHHHHHHHHHHHHHH
T ss_pred cccCCCcCCccEeECC-------------------CCCEEecchhhh-CCCEEEEEEEe-CCCCchHHHHHHHHHHHHHH
Confidence 4678899996666554 49999999 86 66777777776 99999 9999999999999
Q ss_pred hh-hhcCCeEEEEecCChhhHHhhhcC-CCCCceeeecc---chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 275 IF-DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ---GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 275 eL-~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp---~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
++ +..|+.+|+|+.+.....++.|.+ +.++|+++.|+ +..++++||+.
T Consensus 63 ~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--------------------------- 115 (150)
T 3fw2_A 63 KYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIY--------------------------- 115 (150)
T ss_dssp HHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC---------------------------
T ss_pred HhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCC---------------------------
Confidence 99 888999999998866445777775 78999999999 67888887763
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
..|.+||||++| +|++.+. +.+++.+.++.+.+
T Consensus 116 -----------~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 116 -----------KIPANILLSSDG-KILAKNL--------RGEELKKKIENIVE 148 (150)
T ss_dssp -----------SSSEEEEECTTS-BEEEESC--------CHHHHHHHHHHHHH
T ss_pred -----------ccCeEEEECCCC-EEEEccC--------CHHHHHHHHHHHHh
Confidence 136899999996 8999884 66777777776643
No 59
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.58 E-value=1.5e-14 Score=124.90 Aligned_cols=137 Identities=15% Similarity=0.057 Sum_probs=109.3
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+.+|+.+|.+.+.+. +|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++
T Consensus 12 ~~~~~~G~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~ 70 (158)
T 3hdc_A 12 APLVRTGALAPNFKLPTL-------------------SGENKSLAQY-RGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSF 70 (158)
T ss_dssp SCCCCTTSBCCCCEEECT-------------------TSCEEESGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHS
T ss_pred CcccCCCCcCCCceeEcC-------------------CCCEEehHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHc
Confidence 345677888885555544 4999999996 6678878777 899999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
.+.++.+|+|+.+.. +++|.. ..++|+++.|++..+++.||+.
T Consensus 71 ~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--------------------------------- 114 (158)
T 3hdc_A 71 PKGDLVVLAVNVEKR---FPEKYRRAPVSFNFLSDATGQVQQRYGAN--------------------------------- 114 (158)
T ss_dssp STTSEEEEEEECSSS---CCGGGGGCCCSCEEEECTTSHHHHHTTCC---------------------------------
T ss_pred ccCCeEEEEEeCCHH---HHHHHHHcCCCceEEECchHHHHHHhCCC---------------------------------
Confidence 988999999998762 456664 7889999999999999988873
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 399 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~ 399 (416)
..|.+||||++| +|++.+.+....+. .++++.+.+
T Consensus 115 -----~~P~~~lid~~G-~i~~~~~G~~~~~~---~~~~~~~~~ 149 (158)
T 3hdc_A 115 -----RLPDTFIVDRKG-IIRQRVTGGIEWDA---PKVVSYLKS 149 (158)
T ss_dssp -----SSSEEEEECTTS-BEEEEEESCCCTTS---HHHHHHHHT
T ss_pred -----CcceEEEEcCCC-CEEEEEeCCCccch---HHHHHHHHh
Confidence 136899999996 89999999866554 455555544
No 60
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.58 E-value=9.9e-15 Score=122.46 Aligned_cols=135 Identities=13% Similarity=-0.007 Sum_probs=108.4
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceech--hhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKAL--ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLs--dL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
...+|+.+|.+.+.+. +|+.++++ ++ +++++||.|+ ..|||.|+.++..|.++..++
T Consensus 4 ~~~~g~~~p~~~l~~~-------------------~g~~~~l~~~~~-~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~ 62 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNE-------------------KGEKLSRSAERF-RNRYLLLNFW-ASWCDPQPEANAELKRLNKEY 62 (148)
T ss_dssp -CCTTSBCCCCCEEBT-------------------TSCEECTTSTTT-TTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHT
T ss_pred cccCCCcCCCeEeeCC-------------------CCCEEecccccc-CCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHh
Confidence 4678888885555544 49999999 86 6677777777 899999999999999999999
Q ss_pred -hhcCCeEEEEecCChhhHHhhhcC-CCCCceeeecc---chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 277 -DALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQ---GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 277 -~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp---~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
...|+.+|+|+.+.....++.|.. ..++|+++.|+ +..+.+.||+.
T Consensus 63 ~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~----------------------------- 113 (148)
T 3fkf_A 63 KKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAIL----------------------------- 113 (148)
T ss_dssp TTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC-----------------------------
T ss_pred cCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCC-----------------------------
Confidence 888999999998765545677775 78899999999 67888887763
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|.+||||++| +|++.+. +.+++.+.++.+.
T Consensus 114 ---------~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~~ll 145 (148)
T 3fkf_A 114 ---------TLPTNILLSPTG-KILARDI--------QGEALTGKLKELL 145 (148)
T ss_dssp ---------SSSEEEEECTTS-BEEEESC--------CHHHHHHHHHHHC
T ss_pred ---------CcCEEEEECCCC-eEEEecC--------CHHHHHHHHHHHH
Confidence 147899999996 8998876 6788888777764
No 61
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.58 E-value=2e-14 Score=123.25 Aligned_cols=148 Identities=13% Similarity=0.152 Sum_probs=111.5
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.+..+|+.+|.+.+.+. +|+++++.++ +++++||.|+ ..|||.|+.++..|.++..++.
T Consensus 6 ~~~~~g~~~p~~~l~~~-------------------~g~~~~l~~~-~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~ 64 (165)
T 3or5_A 6 QADARPTPAPSFSGVTV-------------------DGKPFSSASL-KGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWA 64 (165)
T ss_dssp -CCCCCCBCCCCEEECT-------------------TSCEEEGGGG-TTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHT
T ss_pred hhhcCCCCCCCceeeCC-------------------CCCEechhHc-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhc
Confidence 35677888886655554 4999999996 6778878777 9999999999999999999999
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 356 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~ 356 (416)
..|+.+|+|+.+.....++.|.+ ..++|+++.|.+ .+.+.|+... .
T Consensus 65 ~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------------------------~---- 111 (165)
T 3or5_A 65 SRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATP-ELIRAFNGYI----------------------------D---- 111 (165)
T ss_dssp TTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCH-HHHHHHHTTS----------------------------T----
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCH-HHHHHHhhhh----------------------------c----
Confidence 99999999997764444677765 788999999987 7777765420 0
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhc
Q 014901 357 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQR 405 (416)
Q Consensus 357 GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~~ 405 (416)
......|.+||||++| +|++.+.+. .+.+++.+.++.+-.+..
T Consensus 112 ~~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 112 GGITGIPTSFVIDASG-NVSGVIVGP-----RSKADFDRIVKMALGAKA 154 (165)
T ss_dssp TCSCSSSEEEEECTTS-BEEEEECSC-----CCHHHHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCC-cEEEEEcCC-----CCHHHHHHHHHHHHhhhc
Confidence 0112368999999996 899888764 357888888887754443
No 62
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.58 E-value=1.2e-14 Score=121.20 Aligned_cols=137 Identities=17% Similarity=0.118 Sum_probs=103.6
Q ss_pred ccCCCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhcc
Q 014901 194 GCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKK 273 (416)
Q Consensus 194 g~~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~ 273 (416)
|....++.+|+.+|.+.+.+. +|+.+++.+ +++++||.|+ ..|||.|+.++..|.++.
T Consensus 3 ~~~~~~~~~g~~~p~~~l~~~-------------------~g~~~~l~~--~gk~~ll~f~-~~~C~~C~~~~~~l~~~~ 60 (145)
T 3erw_A 3 GAAQAEEKQPAVPAVFLMKTI-------------------EGEDISIPN--KGQKTILHFW-TSWCPPCKKELPQFQSFY 60 (145)
T ss_dssp ---------CCSCCEEEEECT-------------------TSCEEEESC--TTSEEEEEEE-CSSCHHHHHHHHHHHHHH
T ss_pred CcccccccCCCcCCCceeecC-------------------CCCEEeHHH--CCCEEEEEEE-CCCCHHHHHHHHHHHHHH
Confidence 334456678888886666554 489999999 7788888888 999999999999999999
Q ss_pred chhhhcCCeEEEEecC----ChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHh
Q 014901 274 PIFDALGIQLFAVLHE----YIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRART 348 (416)
Q Consensus 274 peL~alGV~LVaIspE----s~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~ 348 (416)
.++...++.+|+|+.+ +.+ .++.|.+ +.++|+++.|++..+++.||+.
T Consensus 61 ~~~~~~~~~~v~v~~d~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-------------------------- 113 (145)
T 3erw_A 61 DAHPSDSVKLVTVNLVNSEQNQQ-VVEDFIKANKLTFPIVLDSKGELMKEYHII-------------------------- 113 (145)
T ss_dssp HHCCCSSEEEEEEECGGGSSCHH-HHHHHHHHTTCCSCEEECSSSHHHHHTTCC--------------------------
T ss_pred HHcCCCCEEEEEEEccCCcCCHH-HHHHHHHHcCCceeEEEcCchhHHHhcCcC--------------------------
Confidence 9988789999999874 344 4777775 7899999999999999988873
Q ss_pred cCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHH
Q 014901 349 LGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEIC 397 (416)
Q Consensus 349 ~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAl 397 (416)
..|.+||||++| +|++.+.+. .+.+++.+.+
T Consensus 114 ------------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l 144 (145)
T 3erw_A 114 ------------TIPTSFLLNEKG-EIEKTKIGP-----MTAEQLKEWT 144 (145)
T ss_dssp ------------EESEEEEECTTC-CEEEEEESC-----CCHHHHHHHH
T ss_pred ------------ccCeEEEEcCCC-cEEEEEcCC-----cCHHHHHHhh
Confidence 136899999997 899888764 3456665544
No 63
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.57 E-value=1.6e-14 Score=127.57 Aligned_cols=145 Identities=13% Similarity=0.059 Sum_probs=110.1
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
...+|..+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++..
T Consensus 33 ~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~ 91 (186)
T 1jfu_A 33 MASAPLKLPDLAFEDA-------------------DGKPKKLSDF-RGKTLLVNLW-ATWCVPCRKEMPALDELQGKLSG 91 (186)
T ss_dssp ECCSCCBCCCCEEECT-------------------TSCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCB
T ss_pred cccCCCcCCCcEeEcC-------------------CCCEeeHHHc-CCCEEEEEEE-eCCCHhHHHHHHHHHHHHHHhcc
Confidence 3466777885555444 4999999996 6677777777 89999999999999999999988
Q ss_pred cCCeEEEEecCCh-hhHHhhhcC-CCC-CceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 279 LGIQLFAVLHEYI-ESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 279 lGV~LVaIspEs~-~~~ik~F~~-~~l-~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
.|+++|+|+.+.. ...++.|.+ ..+ .|+++.|++..++++||+..
T Consensus 92 ~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------------------------------- 139 (186)
T 1jfu_A 92 PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG-------------------------------- 139 (186)
T ss_dssp TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT--------------------------------
T ss_pred CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc--------------------------------
Confidence 8999999997653 123566764 556 58999999999999887731
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
+....|.+||||++| +|++.|.+... .+.+++++.++.+..
T Consensus 140 --~~~~~P~~~lid~~G-~i~~~~~g~~~---~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 140 --RALGMPTSVLVDPQG-CEIATIAGPAE---WASEDALKLIRAATG 180 (186)
T ss_dssp --CCSSSSEEEEECTTS-BEEEEEESCCC---TTSHHHHHHHHHHHC
T ss_pred --ccCCCCEEEEECCCC-CEEEEEecCCc---cCHHHHHHHHHHHhc
Confidence 011258999999996 89999987532 235777777777654
No 64
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.57 E-value=4.8e-14 Score=125.22 Aligned_cols=140 Identities=13% Similarity=0.106 Sum_probs=105.6
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.++.+|+.+|.+.+++. . ..++++++.++ +++++||.|+ ..|||.|+.++..|.++..+
T Consensus 28 ~~~~~G~~~P~f~l~~~-----~------------g~~~~~~l~~~-~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~-- 86 (176)
T 3kh7_A 28 PSALIGKPFPAFDLPSV-----Q------------DPARRLTEADL-KGKPALVNVW-GTWCPSCRVEHPELTRLAEQ-- 86 (176)
T ss_dssp TTTTTTSBCCCCEEEBS-----S------------CTTSEEEGGGG-CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT--
T ss_pred cccccCCcCCCcEeccc-----C------------CCCceecHHHh-CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHC--
Confidence 35678888886666655 1 12388999996 5678888777 88999999999999887654
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCce-eeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYWGGV-VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l~f~-VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
|+.+|+|+.+.....++.|.+ ..++|+ ++.|++..+.++||+..
T Consensus 87 --~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-------------------------------- 132 (176)
T 3kh7_A 87 --GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG-------------------------------- 132 (176)
T ss_dssp --TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS--------------------------------
T ss_pred --CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC--------------------------------
Confidence 899999995433334777775 778888 69999999999888730
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
.|.+||||++| +|++.+.+. .+.+++.+.+..+-++.
T Consensus 133 ------~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l~~l 169 (176)
T 3kh7_A 133 ------APETYLIDKQG-IIRHKIVGV-----VDQKVWREQLAPLYQQL 169 (176)
T ss_dssp ------SCEEEEECTTC-BEEEEEESC-----CCHHHHHHHTHHHHHHH
T ss_pred ------CCeEEEECCCC-eEEEEEcCC-----CCHHHHHHHHHHHHHHH
Confidence 37899999997 899988775 35677766666654433
No 65
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.56 E-value=3.2e-14 Score=125.62 Aligned_cols=144 Identities=15% Similarity=0.215 Sum_probs=110.5
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
++.++..+|.+.+.+.. .+|++++++++ +++++||.|+ ..|||.|+.++..|.++..++.+
T Consensus 30 ~~~~g~~~p~f~l~~~~-----------------~~g~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~ 90 (183)
T 3lwa_A 30 DEADRQQLPDIGGDSLM-----------------EEGTQINLSDF-ENQVVILNAW-GQWCAPCRSESDDLQIIHEELQA 90 (183)
T ss_dssp CGGGCCCCCCCEEEBSS-----------------STTCEEEGGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCceeccccc-----------------cCCcEecHHHh-CCCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHh
Confidence 45667777755554441 14999999995 6677777777 79999999999999999999999
Q ss_pred cCC------eEEEEecCC-hhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcC
Q 014901 279 LGI------QLFAVLHEY-IESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLG 350 (416)
Q Consensus 279 lGV------~LVaIspEs-~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G 350 (416)
.|+ .+|+|+.+. ....++.|.+ +.++|+++.|++..+.++||.-.
T Consensus 91 ~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------------------------- 143 (183)
T 3lwa_A 91 AGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVP--------------------------- 143 (183)
T ss_dssp CC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCC---------------------------
T ss_pred cCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCC---------------------------
Confidence 999 999999877 2334777775 78999999999988877665310
Q ss_pred CccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 351 VEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 351 ~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
....|.+||||++| +|++.|... .+.+++.+.++.+.+
T Consensus 144 --------v~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 144 --------ASVIPTTIVLDKQH-RPAAVFLRE-----VTSKDVLDVALPLVD 181 (183)
T ss_dssp --------TTCCSEEEEECTTS-CEEEEECSC-----CCHHHHHHHHHHHHH
T ss_pred --------CCCCCeEEEECCCC-cEEEEEcCC-----CCHHHHHHHHHHHHh
Confidence 01257899999997 899988754 478899888887754
No 66
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.55 E-value=2.4e-14 Score=122.06 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=109.2
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
++.+|+.+|.+.+.+. +|+.+++.++ + +++||.|+ ..|||.|+.++..|.++..++
T Consensus 4 ~l~~g~~~p~f~l~~~-------------------~g~~~~l~~~-~-k~vll~f~-~~~C~~C~~~~~~l~~l~~~~-- 59 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDP-------------------KGQPVTPATV-S-KPAVIVFW-ASWCTVCKAEFPGLHRVAEET-- 59 (154)
T ss_dssp CCCSBEECCCCCEECT-------------------TSCEECTTTS-C-SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCcCCceEEECC-------------------CCCEechHHc-C-CeEEEEEE-cccChhHHHHHHHHHHHHHHc--
Confidence 5678888886655544 4999999996 5 88888888 889999999999999998888
Q ss_pred cCCeEEEEec---CChhhHHhhhcC-CCCCceeeec---cchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 279 LGIQLFAVLH---EYIESEVKDFWP-RYWGGVVVYD---QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 279 lGV~LVaIsp---Es~~~~ik~F~~-~~l~f~VLsD---p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
++++|+|+. ++.+ .++.|.+ ..++|+++.| ....+++.||+.
T Consensus 60 -~v~~v~v~~d~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~----------------------------- 108 (154)
T 3ia1_A 60 -GVPFYVISREPRDTRE-VVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL----------------------------- 108 (154)
T ss_dssp -CCCEEEEECCTTCCHH-HHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC-----------------------------
T ss_pred -CCeEEEEeCCCcccHH-HHHHHHHHcCCCcccccccccchHHHHHHhCCC-----------------------------
Confidence 899999998 5555 4777775 7789999998 667777766552
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhhccc
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQRDQ 407 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~~~~ 407 (416)
..|.+||||++| +|++.+.+. .+.+++.+.++++..++..+
T Consensus 109 ---------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~~~~~~~~ 149 (154)
T 3ia1_A 109 ---------GQPWTFVVDREG-KVVALFAGR-----AGREALLDALLLAGADLEGH 149 (154)
T ss_dssp ---------SSCEEEEECTTS-EEEEEEESB-----CCHHHHHHHHHHTTCCC---
T ss_pred ---------cccEEEEECCCC-CEEEEEcCC-----CCHHHHHHHHHhccCccccc
Confidence 147899999996 899988753 56889999998876555443
No 67
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.55 E-value=2.1e-14 Score=121.82 Aligned_cols=133 Identities=13% Similarity=-0.039 Sum_probs=97.9
Q ss_pred CCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 197 QAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 197 ~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
.....+|+.+|.+.+ +. +|++++++++ +++++||.|+ ..||+.|+.++..|.+++.++
T Consensus 4 ~~~l~~G~~~P~f~l-~~-------------------~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~ 61 (143)
T 4fo5_A 4 TEGVNPGDLAPRIEF-LG-------------------NDAKASFHNQ-LGRYTLLNFW-AAYDAESRARNVQLANEVNKF 61 (143)
T ss_dssp CBSSSTTSBCCCCCC-------------------------CCCSCCS-SCCEEEEEEE-CTTCHHHHHHHHHHHHHHTTS
T ss_pred ccccCCcccCCceEE-cC-------------------CCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHh
Confidence 345678889996666 43 3889999995 6666655555 789999999999999999999
Q ss_pred hhcCCeEEEEecCChhhHHhhhcC-CCCCc-eeeeccc---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC
Q 014901 277 DALGIQLFAVLHEYIESEVKDFWP-RYWGG-VVVYDQG---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV 351 (416)
Q Consensus 277 ~alGV~LVaIspEs~~~~ik~F~~-~~l~f-~VLsDp~---r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~ 351 (416)
.+.|+.+|+|+.+......+.|.+ +.++| ++++|+. ..+++.||+.
T Consensus 62 ~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~----------------------------- 112 (143)
T 4fo5_A 62 GPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLR----------------------------- 112 (143)
T ss_dssp CTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGG-----------------------------
T ss_pred CcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCC-----------------------------
Confidence 988999999998754444667765 67889 7899984 4677766652
Q ss_pred ccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 014901 352 EQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 398 (416)
Q Consensus 352 ~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk 398 (416)
.+|.+||||++| +|++.+. ..+++-+.++
T Consensus 113 ---------~~P~~~lid~~G-~i~~~~~--------~~~~l~~~l~ 141 (143)
T 4fo5_A 113 ---------KGFKNFLINDEG-VIIAANV--------TPEKLTEILK 141 (143)
T ss_dssp ---------GCCCEEEECTTS-BEEEESC--------CHHHHHHHHT
T ss_pred ---------CCCcEEEECCCC-EEEEccC--------CHHHHHHHHH
Confidence 147899999996 8988764 2455555544
No 68
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.54 E-value=3.6e-14 Score=121.37 Aligned_cols=122 Identities=15% Similarity=0.032 Sum_probs=99.3
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHH-HHHHHhccchhhhcCCeEEEEec-------CChhhHHhhhcC-CCCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAE-AHQLYAKKPIFDALGIQLFAVLH-------EYIESEVKDFWP-RYWG 304 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~e-l~~Ls~~~peL~alGV~LVaIsp-------Es~~~~ik~F~~-~~l~ 304 (416)
+|++++++++ +++++||.|+.. |||.|+.+ +..|.++..++...|+.+|+|+. ++.+ .++.|.+ .+++
T Consensus 19 ~g~~~~l~~~-~gk~vlv~F~a~-~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~-~~~~~~~~~~~~ 95 (160)
T 3lor_A 19 NHEGLSNEDL-RGKVVVVEVFQM-LCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPE-ALKVFIDEFGIK 95 (160)
T ss_dssp SSCCCCHHHH-TTSEEEEEEECT-TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHH-HHHHHHHHTTCC
T ss_pred CCCccCHHHh-CCCEEEEEEEcC-CCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHH-HHHHHHHHcCCC
Confidence 4899999996 666777777654 99999996 99999999999988999999995 4555 4777775 7899
Q ss_pred ceeeeccchH------HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEE
Q 014901 305 GVVVYDQGME------FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQ 378 (416)
Q Consensus 305 f~VLsDp~r~------lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~ya 378 (416)
|+++.|++.. ++++||+. ..|.+||||++| +|++.
T Consensus 96 ~~~~~d~~~~~~~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~ 136 (160)
T 3lor_A 96 FPVAVDMPREGQRIPSTMKKYRLE--------------------------------------GTPSIILADRKG-RIRQV 136 (160)
T ss_dssp SCEEEECCCTTCSSCHHHHHTTCC--------------------------------------SSSEEEEECTTS-BEEEE
T ss_pred CcEEECCccccchhhhHHHhcccC--------------------------------------ccceEEEECCCC-cEEEE
Confidence 9999999988 88887763 146899999996 89998
Q ss_pred EecCCCCCCCCHHHHHHHHHhhhh
Q 014901 379 FIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 379 h~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
|.+. .+.+++.+.++.+-+
T Consensus 137 ~~g~-----~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 137 QFGQ-----VDDFVLGLLLGSLLS 155 (160)
T ss_dssp EESC-----CCHHHHHHHHHHHHT
T ss_pred ecCc-----CCHHHHHHHHHHHHh
Confidence 8865 457788888877654
No 69
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.54 E-value=3.3e-14 Score=126.07 Aligned_cols=144 Identities=10% Similarity=0.045 Sum_probs=109.4
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
...+|+.+|.+.|.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++..
T Consensus 6 ~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~ 64 (188)
T 2cvb_A 6 ELPLESPLIDAELPDP-------------------RGGRYRLSQF-HEPLLAVVFM-CNHCPYVKGSIGELVALAERYRG 64 (188)
T ss_dssp CCCTTCBCCCCEEECT-------------------TSCEEEGGGC-CSSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTTT
T ss_pred cCCCCCCCCCceeecC-------------------CCCEEeHHHh-CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhhc
Confidence 4567888886655544 4999999996 6678888887 78999999999999999999988
Q ss_pred cCCeEEEEec--------CChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhc
Q 014901 279 LGIQLFAVLH--------EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTL 349 (416)
Q Consensus 279 lGV~LVaIsp--------Es~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~ 349 (416)
. +.+|+|+. ++.+ .++.|.+ +.++|+++.|++..++++||+..
T Consensus 65 ~-~~~v~v~~d~~~~~~~d~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-------------------------- 116 (188)
T 2cvb_A 65 K-VAFVGINANDYEKYPEDAPE-KMAAFAEEHGIFFPYLLDETQEVAKAYRALR-------------------------- 116 (188)
T ss_dssp T-EEEEEEECCCTTTCGGGSHH-HHHHHHHHHTCCSCEEECSSSHHHHHTTCCE--------------------------
T ss_pred C-eEEEEEEcCccccccccCHH-HHHHHHHHhCCCceEEECCcchHHHHcCCCC--------------------------
Confidence 7 99999997 4444 3777775 67899999999999999888741
Q ss_pred CCccccCCCCcccceEEEEecCCCcEEEEEecCCCC---CCCCHHHHHHHHHhhhhhh
Q 014901 350 GVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG---DWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 350 G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~g---Drad~~eVLaAlk~l~~~~ 404 (416)
.|.+||||++| +|++.....++. ...+.+++.++++.+....
T Consensus 117 ------------~P~~~lid~~G-~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 161 (188)
T 2cvb_A 117 ------------TPEVFLFDERR-LLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE 161 (188)
T ss_dssp ------------ESEEEEECTTC-BEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC
T ss_pred ------------CCeEEEECCCC-cEEEEEecCCccccccccCHHHHHHHHHHHHcCC
Confidence 36789999997 888873322211 1235577777777775544
No 70
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.54 E-value=5.3e-14 Score=119.12 Aligned_cols=132 Identities=12% Similarity=0.038 Sum_probs=100.8
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh---ccch
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA---KKPI 275 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~---~~pe 275 (416)
...+|+.+|.+.+.+. +|+.++++++ +++++||.|+ ..|||.|+.++..|.+ ++.+
T Consensus 4 ~~~~G~~ap~f~l~~~-------------------~g~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~ 62 (142)
T 3eur_A 4 KNRLGTKALNFTYTLD-------------------SGVKGTLYQF-PAEYTLLFIN-NPGCHACAEMIEGLKASPVINGF 62 (142)
T ss_dssp TTCTTSBCCCCEEEET-------------------TSCEEETTTC-CCSEEEEEEC-CSSSHHHHHHHHHHHHCHHHHHH
T ss_pred hhcCCCccCCcEEEcC-------------------CCCEeeHHHc-CCCEEEEEEE-CCCCccHHHHHHHHhhhHHHHHH
Confidence 3567888996666554 4999999996 5677777777 9999999999999999 8999
Q ss_pred hhhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchH--HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCc
Q 014901 276 FDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGME--FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVE 352 (416)
Q Consensus 276 L~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~--lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~ 352 (416)
+++.|+.+|+|+.+......+.|.+ ..++|+.+.|++.. +.+.||+.
T Consensus 63 ~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~------------------------------ 112 (142)
T 3eur_A 63 TAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLR------------------------------ 112 (142)
T ss_dssp HHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCT------------------------------
T ss_pred hccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCC------------------------------
Confidence 9999999999998876555666665 66788999998865 33322221
Q ss_pred cccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHH
Q 014901 353 QNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICT 398 (416)
Q Consensus 353 gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk 398 (416)
..|.+||||++| +|++.+.. .++|.+.++
T Consensus 113 --------~~P~~~lid~~G-~i~~~~~~--------~~~l~~~l~ 141 (142)
T 3eur_A 113 --------AIPTLYLLDKNK-TVLLKDAT--------LQKVEQYLA 141 (142)
T ss_dssp --------TCSEEEEECTTC-BEEEEEEC--------HHHHHHHHH
T ss_pred --------cCCeEEEECCCC-cEEecCCC--------HHHHHHHHh
Confidence 258999999997 89998763 455555543
No 71
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.53 E-value=5.3e-14 Score=120.33 Aligned_cols=130 Identities=10% Similarity=0.092 Sum_probs=100.8
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccc
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 312 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~ 312 (416)
+|++++++++ +++++||.|+ ..|||.|+.++..|.++..+++..|+.+|+|+.++.+. ++.|.+ ..++|+++.|.+
T Consensus 13 ~G~~~~l~~~-~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~-~~~~~~~~~~~~~~~~~~~ 89 (151)
T 3raz_A 13 DNTPQSLQSL-KAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDN-IGNFLKQTPVSYPIWRYTG 89 (151)
T ss_dssp TCCEECGGGC-CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHH-HHHHHHHSCCSSCEEEECC
T ss_pred CCCEecHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHH-HHHHHHHcCCCCceEecCc
Confidence 5999999996 6667777766 88999999999999999999988999999999988775 788875 789999999874
Q ss_pred ---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCC
Q 014901 313 ---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAP 389 (416)
Q Consensus 313 ---r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad 389 (416)
..++++||.. ....|.+||||++| +|++.|.+. .+
T Consensus 90 ~~~~~~~~~~~~~------------------------------------v~~~P~~~lid~~G-~i~~~~~g~-----~~ 127 (151)
T 3raz_A 90 ANSRNFMKTYGNT------------------------------------VGVLPFTVVEAPKC-GYRQTITGE-----VN 127 (151)
T ss_dssp SCHHHHHHTTTCC------------------------------------SCCSSEEEEEETTT-TEEEECCSC-----CC
T ss_pred cchHHHHHHhCCc------------------------------------cCCCCEEEEECCCC-cEEEEECCC-----CC
Confidence 4455555521 01257899999997 899887654 46
Q ss_pred HHHHHHHHHhhhhhhcccc
Q 014901 390 LAEVIEICTQLQDQQRDQS 408 (416)
Q Consensus 390 ~~eVLaAlk~l~~~~~~~~ 408 (416)
.+++.+.++.+...+....
T Consensus 128 ~~~l~~~l~~l~~~~~~~~ 146 (151)
T 3raz_A 128 EKSLTDAVKLAHSKCREGH 146 (151)
T ss_dssp HHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHhhccc
Confidence 7888888888876654443
No 72
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.51 E-value=7.5e-14 Score=124.03 Aligned_cols=154 Identities=10% Similarity=0.025 Sum_probs=103.3
Q ss_pred ccccCCCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 014901 192 VCGCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 192 ~~g~~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~ 271 (416)
+|+.....+++|+.+|.|.|.+. +|++++++++ +++++||.| -..|||.|+.++..|.+
T Consensus 13 ~~~~~~~~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vll~F-~atwC~~C~~~~~~l~~ 71 (183)
T 2obi_A 13 ACCASRDDWRCARSMHEFSAKDI-------------------DGHMVNLDKY-RGFVCIVTN-VASQCGKTEVNYTQLVD 71 (183)
T ss_dssp ------CCGGGCCSGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEEEE-ECSSSTTHHHHHHHHHH
T ss_pred hhhhcccCCcccCcccceEEEcC-------------------CCCEeeHHHc-CCCEEEEEE-eCCCCCCcHHHHHHHHH
Confidence 45566677788888996666554 4999999995 655655555 57899999999999999
Q ss_pred ccchhhhcCCeEEEEecC--------ChhhHHhhhcC-CCCCceeee--ccchH----HHHHhCCCcccccccccccccC
Q 014901 272 KKPIFDALGIQLFAVLHE--------YIESEVKDFWP-RYWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLN 336 (416)
Q Consensus 272 ~~peL~alGV~LVaIspE--------s~~~~ik~F~~-~~l~f~VLs--Dp~r~----lYkALGl~r~~r~s~~sgfll~ 336 (416)
++.++.+.|+++|+|+.+ +++ .+++|.+ ..++|+++. |++.. +|+.|+-..
T Consensus 72 l~~~~~~~~v~vv~vs~d~~~~~e~~~~~-~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~------------- 137 (183)
T 2obi_A 72 LHARYAECGLRILAFPCNQFGKQEPGSNE-EIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQP------------- 137 (183)
T ss_dssp HHHHHGGGTEEEEEEECCCSTTCCCSCHH-HHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTST-------------
T ss_pred HHHHHhcCCeEEEEEECCCCCCCCCCCHH-HHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccC-------------
Confidence 999999999999999853 444 3777764 678999997 66543 444332110
Q ss_pred HHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 014901 337 PRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 399 (416)
Q Consensus 337 P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~ 399 (416)
+ ..|+.+ .+....|.+||||++| +|++.|... .+++++.+.+++
T Consensus 138 ~----------~~g~~~---~~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ 181 (183)
T 2obi_A 138 K----------GKGILG---NAIKWNFTKFLIDKNG-CVVKRYGPM-----EEPLVIEKDLPH 181 (183)
T ss_dssp T----------TCCSSS---SSCCSTTCEEEECTTS-CEEEEECTT-----SCTHHHHTTSGG
T ss_pred C----------CCCccc---ccccccceEEEECCCC-CEEEEeCCC-----CCHHHHHHHHHH
Confidence 0 001111 0112258999999997 899988753 345677666554
No 73
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.51 E-value=2.6e-13 Score=112.22 Aligned_cols=121 Identities=14% Similarity=0.103 Sum_probs=98.4
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccc
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQG 312 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~ 312 (416)
+|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++. ++.+|+|+.+.....++.|.. +.++|+++.|++
T Consensus 13 ~g~~~~l~~~-~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~ 88 (136)
T 1lu4_A 13 SGAPFDGASL-QGKPAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD 88 (136)
T ss_dssp TSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT
T ss_pred CCCeecHHHh-CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc
Confidence 4999999996 7788888888 8899999999999999888886 899999998764344777775 778999999999
Q ss_pred hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHH
Q 014901 313 MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAE 392 (416)
Q Consensus 313 r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~e 392 (416)
..+++.||+.. .|.+||+|++| +|+ .|.+ .....+.++
T Consensus 89 ~~~~~~~~i~~--------------------------------------~P~~~lid~~G-~i~-~~~~--~~g~~~~~~ 126 (136)
T 1lu4_A 89 GVIWARYNVPW--------------------------------------QPAFVFYRADG-TST-FVNN--PTAAMSQDE 126 (136)
T ss_dssp SHHHHHTTCCS--------------------------------------SSEEEEECTTS-CEE-EECC--SSSCCCHHH
T ss_pred hhHHHhcCCCC--------------------------------------CCEEEEECCCC-cEE-EEEc--CCCccCHHH
Confidence 99999888730 36899999996 787 6662 234457888
Q ss_pred HHHHHHhh
Q 014901 393 VIEICTQL 400 (416)
Q Consensus 393 VLaAlk~l 400 (416)
+.+.++++
T Consensus 127 l~~~l~~l 134 (136)
T 1lu4_A 127 LSGRVAAL 134 (136)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 88888765
No 74
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.51 E-value=3e-13 Score=111.20 Aligned_cols=119 Identities=16% Similarity=0.117 Sum_probs=96.1
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcC-CCC-Cceeeecc
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWP-RYW-GGVVVYDQ 311 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~-~~l-~f~VLsDp 311 (416)
+|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++. ++.+|+|..+.....++.|.. .++ +|+++.|+
T Consensus 14 ~g~~~~l~~~-~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~ 89 (136)
T 1zzo_A 14 DGHDFHGESL-LGKPAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADT 89 (136)
T ss_dssp TSCEEEGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECT
T ss_pred CCCEeeHHHh-CCCeEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcC
Confidence 4899999996 7788888888 8899999999999999888876 899999997654444777775 677 99999999
Q ss_pred chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHH
Q 014901 312 GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLA 391 (416)
Q Consensus 312 ~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~ 391 (416)
+..+++.||+. ..|.+||+|++| +|. .+.+. .+.+
T Consensus 90 ~~~~~~~~~i~--------------------------------------~~P~~~~id~~g-~i~-~~~g~-----~~~~ 124 (136)
T 1zzo_A 90 DGSVWANFGVT--------------------------------------QQPAYAFVDPHG-NVD-VVRGR-----MSQD 124 (136)
T ss_dssp TCHHHHHTTCC--------------------------------------SSSEEEEECTTC-CEE-EEESC-----CCHH
T ss_pred CcHHHHHcCCC--------------------------------------CCceEEEECCCC-CEE-EEecC-----CCHH
Confidence 99999988773 136899999996 777 66553 3578
Q ss_pred HHHHHHHhhh
Q 014901 392 EVIEICTQLQ 401 (416)
Q Consensus 392 eVLaAlk~l~ 401 (416)
++.+.++.+.
T Consensus 125 ~l~~~l~~~l 134 (136)
T 1zzo_A 125 ELTRRVTALT 134 (136)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 8888887653
No 75
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.26 E-value=1.3e-15 Score=131.10 Aligned_cols=144 Identities=13% Similarity=0.040 Sum_probs=108.5
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh-ccchhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA-KKPIFD 277 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~-~~peL~ 277 (416)
.+.+|+.+|.+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.+ +..++.
T Consensus 6 ~l~~g~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~ 64 (159)
T 2ls5_A 6 IVRIGEMAPDFTITLT-------------------DGKQVTLSSL-RGKVVMLQFT-ASWCGVCRKEMPFIEKDIWLKHK 64 (159)
Confidence 4567888885555444 4899999996 6678877777 8899999999999998 888887
Q ss_pred -hcCCeEEEEecCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 278 -ALGIQLFAVLHEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 278 -alGV~LVaIspEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
..++.+|+|+.+.....++.|.+ ..++|+++.|++..++++||+.. .
T Consensus 65 ~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------------------------~------ 113 (159)
T 2ls5_A 65 DNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRD-------------------------A------ 113 (159)
Confidence 78999999997765434667765 67899999999999988877630 0
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
-.|.+||||++| +|++.+.+. +..+++++|+.+......
T Consensus 114 -----~~P~~~lid~~G-~i~~~~~g~---~~~~l~~~l~~l~~~~~~ 152 (159)
T 2ls5_A 114 -----GITRNVLIDREG-KIVKLTRLY---NEEEFASLVQQINEMLKE 152 (159)
Confidence 136799999996 899888653 233566666666555433
No 76
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.51 E-value=2.3e-13 Score=113.75 Aligned_cols=137 Identities=9% Similarity=0.078 Sum_probs=106.2
Q ss_pred CCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC
Q 014901 201 VNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG 280 (416)
Q Consensus 201 ~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alG 280 (416)
++|+.+|.+.++.. + .+|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++...
T Consensus 2 ~~g~~~P~f~~~~~---~--------------~~g~~~~~~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~- 61 (148)
T 2b5x_A 2 KLRQPMPELTGEKA---W--------------LNGEVTREQLI-GEKPTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ- 61 (148)
T ss_dssp CTTCBCCCCCCCSE---E--------------ESCCCCHHHHT-TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred CCCCCCCCCccccc---c--------------ccCcccchhhc-CCCEEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-
Confidence 46778886655322 1 14899999986 7778888887 699999999999999988888776
Q ss_pred CeEEEEecC------ChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcc
Q 014901 281 IQLFAVLHE------YIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQ 353 (416)
Q Consensus 281 V~LVaIspE------s~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~g 353 (416)
+.+|+|..+ +.+ .++.|.. +.++|+++.|++..+.+.||+.
T Consensus 62 ~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~------------------------------- 109 (148)
T 2b5x_A 62 LNVVAVHMPRSEDDLDPG-KIKETAAEHDITQPIFVDSDHALTDAFENE------------------------------- 109 (148)
T ss_dssp SEEEEEECCCSTTTSSHH-HHHHHHHHTTCCSCEEECSSCHHHHHTCCC-------------------------------
T ss_pred cEEEEEEcCCCccccCHH-HHHHHHHHcCCCcceEECCchhHHHHhCCC-------------------------------
Confidence 999999854 344 3677775 7889999999999999988873
Q ss_pred ccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 354 NFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 354 n~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
..|.+||+|++| +|++.+.+. .+.+++.+.++.+.+
T Consensus 110 -------~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 110 -------YVPAYYVFDKTG-QLRHFQAGG-----SGMKMLEKRVNRVLA 145 (148)
T ss_dssp -------CSSEEEEECTTC-BEEEEEESC-----STTHHHHHHHHHHHT
T ss_pred -------CCCEEEEECCCC-cEEEEecCC-----CCHHHHHHHHHHHHh
Confidence 036899999996 899988764 345778777776643
No 77
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.50 E-value=1.4e-13 Score=118.79 Aligned_cols=147 Identities=13% Similarity=0.073 Sum_probs=100.2
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
++++|+.+|.+.|.+. +|++++++++ +++++||.|+- .|||.|+.++..|.+++.++.+
T Consensus 4 ~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~gk~vlv~f~a-~~C~~C~~~~~~l~~l~~~~~~ 62 (169)
T 2v1m_A 4 SHKSWNSIYEFTVKDI-------------------NGVDVSLEKY-RGHVCLIVNVA-CKCGATDKNYRQLQEMHTRLVG 62 (169)
T ss_dssp ---CCCSGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEEEEEC-SSSTTHHHHHHHHHHHHHHHGG
T ss_pred cccCCcccccceeecC-------------------CCCCccHHHc-CCCEEEEEEee-ccCCchHHHHHHHHHHHHHhhc
Confidence 4567888886666554 4999999996 66777777765 8999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhh-cC-CCCCceeee--ccchH----HHHHhCCCcccccccccccccCHHHHHH
Q 014901 279 LGIQLFAVLHE--------YIESEVKDF-WP-RYWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLNPRAIAN 342 (416)
Q Consensus 279 lGV~LVaIspE--------s~~~~ik~F-~~-~~l~f~VLs--Dp~r~----lYkALGl~r~~r~s~~sgfll~P~v~~~ 342 (416)
.|+++|+|+.+ +.+ .++.| .+ ..++|+++. |++.. +|+.+
T Consensus 63 ~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l----------------------- 118 (169)
T 2v1m_A 63 KGLRILAFPCNQFGGQEPWAEA-EIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFL----------------------- 118 (169)
T ss_dssp GTEEEEEEECCCSTTCCCSCHH-HHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHH-----------------------
T ss_pred CCeEEEEEECCccCCCCCCCHH-HHHHHHHHhcCCCCceEEEEeecCccccHHHHHH-----------------------
Confidence 99999999853 333 37777 33 678899996 66543 22211
Q ss_pred HHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 343 YKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 343 ~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
.....|+.+. .....|.+||||++| +|++.|.+. .+++++.+.++++-
T Consensus 119 --~~~~~~~~~~---~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 119 --KSRQHGTLTN---NIKWNFSKFLVDRQG-QPVKRYSPT-----TAPYDIEGDIMELL 166 (169)
T ss_dssp --HHHSCCSSSC---SCCSTTCEEEECTTS-CEEEEECTT-----SCGGGGHHHHHHHH
T ss_pred --HhhcCCccCC---cccccceEEEECCCC-CEEEEcCCC-----CCHHHHHHHHHHHh
Confidence 1111122110 111258999999997 899988763 23466666666553
No 78
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.50 E-value=3.2e-13 Score=117.18 Aligned_cols=137 Identities=17% Similarity=0.079 Sum_probs=103.7
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
...+|+.+|.+.|++. +.+|+.+++.++.+++++||.|+ ..|||.|+.++..|.++..+
T Consensus 21 ~~~~G~~~P~f~l~~~-----------------~~~g~~~~~~~~~~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~--- 79 (168)
T 2b1k_A 21 SALIGKPVPKFRLESL-----------------DNPGQFYQADVLTQGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ--- 79 (168)
T ss_dssp CTTTTSBCCCCEEEES-----------------SSTTCEEEGGGGCCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT---
T ss_pred ccccCCcCCCeEeecc-----------------cCCCcEeehhHhcCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC---
Confidence 4578888886666554 11488999998878888888888 78999999999998876543
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCce-eeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-RYWGGV-VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 356 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~~l~f~-VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~ 356 (416)
|+.+|+|+.+.....++.|.+ .+++|+ ++.|++..+.+.||+.
T Consensus 80 -~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~---------------------------------- 124 (168)
T 2b1k_A 80 -GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVY---------------------------------- 124 (168)
T ss_dssp -TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCC----------------------------------
T ss_pred -CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcc----------------------------------
Confidence 899999996443334677765 677888 7899999999888773
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 357 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 357 GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|.+||||++| +|++.|.+. .+.+++.+.++.+.
T Consensus 125 ----~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 125 ----GAPETFLIDGNG-IIRYRHAGD-----LNPRVWEEEIKPLW 159 (168)
T ss_dssp ----SSSEEEEECTTS-BEEEEEESC-----CCHHHHHHTTHHHH
T ss_pred ----ccCEEEEECCCC-eEEEEEeCC-----CCHHHHHHHHHHHH
Confidence 036899999996 899988753 35566666665543
No 79
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.49 E-value=3.7e-13 Score=110.06 Aligned_cols=119 Identities=8% Similarity=0.071 Sum_probs=93.7
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE------ecCChhhHHhhhcC-CCC-Cc
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV------LHEYIESEVKDFWP-RYW-GG 305 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI------spEs~~~~ik~F~~-~~l-~f 305 (416)
+|+++++.++ +++++||.|+ ..|||.|+.++..|.++..+ ...++.+|+| ..++.+ .++.|.+ ..+ +|
T Consensus 11 ~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 86 (138)
T 4evm_A 11 DGKTYRLSDY-KGKKVYLKFW-ASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEA-DFKNWYKGLDYKNL 86 (138)
T ss_dssp TSCEEEGGGG-TTSEEEEEEC-CTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHH-HHHHHHTTCCCTTC
T ss_pred CCCEEEHHHh-CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHH-HHHHHHhhcCCCCe
Confidence 5999999996 6677777776 88999999999999988877 3457889998 334444 3667765 566 89
Q ss_pred eeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCC
Q 014901 306 VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG 385 (416)
Q Consensus 306 ~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~g 385 (416)
+++.|++..+.++||+.. .|.+||+|++| +|++.+.+.
T Consensus 87 ~~~~d~~~~~~~~~~v~~--------------------------------------~P~~~lid~~G-~i~~~~~g~--- 124 (138)
T 4evm_A 87 PVLVDPSGKLLETYGVRS--------------------------------------YPTQAFIDKEG-KLVKTHPGF--- 124 (138)
T ss_dssp CEEECTTCHHHHHTTCCS--------------------------------------SSEEEEECTTC-CEEEEEESC---
T ss_pred eEEECcchHHHHHcCccc--------------------------------------CCeEEEECCCC-cEEEeecCC---
Confidence 999999999999888731 36899999997 899988753
Q ss_pred CCCCHHHHHHHHHhh
Q 014901 386 DWAPLAEVIEICTQL 400 (416)
Q Consensus 386 Drad~~eVLaAlk~l 400 (416)
.+.+++.+.++++
T Consensus 125 --~~~~~l~~~l~~l 137 (138)
T 4evm_A 125 --MEKDAILQTLKEL 137 (138)
T ss_dssp --CCHHHHHHHHHHC
T ss_pred --CcHHHHHHHHHhh
Confidence 4568888887765
No 80
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.49 E-value=8e-14 Score=118.24 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=105.8
Q ss_pred CCCCCCCC-ccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 200 PVNEKVAP-YSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 200 ~~~~~~ap-l~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
..+|+.+| .+.+.+. +|++++++++ +++++||.|+ ..|||.|+.++..|.++..++..
T Consensus 3 l~~G~~~p~~f~l~~~-------------------~g~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~ 61 (152)
T 2lja_A 3 LRSGNPSAASFSYPDI-------------------NGKTVSLADL-KGKYIYIDVW-ATWCGPCRGELPALKELEEKYAG 61 (152)
T ss_dssp TTTTCCCSSSCEEEET-------------------TTEEEESTTT-TTSEEEEEEC-CSSCCGGGGTHHHHHHHHHHSTT
T ss_pred cccCCCCCcccEeecC-------------------CCCEeeHHHc-CCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHhcc
Confidence 45677777 6666554 4899999996 6677777776 89999999999999999888888
Q ss_pred cCCeEEEEecCChhhHHhhhcC-CCCCc-eeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC
Q 014901 279 LGIQLFAVLHEYIESEVKDFWP-RYWGG-VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK 356 (416)
Q Consensus 279 lGV~LVaIspEs~~~~ik~F~~-~~l~f-~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~ 356 (416)
.|+.+|+|+.+.....++.|.. .++++ +++.|++..+.++||+.
T Consensus 62 ~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~---------------------------------- 107 (152)
T 2lja_A 62 KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN---------------------------------- 107 (152)
T ss_dssp SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC----------------------------------
T ss_pred CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC----------------------------------
Confidence 8999999997765444666664 45554 68899999999888773
Q ss_pred CCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 357 GEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 357 GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
..|.+||||++| +|++.+.. ..+.+++.+.++.+....
T Consensus 108 ----~~P~~~lid~~G-~i~~~~~g-----~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 108 ----GIPRFILLDRDG-KIISANMT-----RPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp ----SSCCEEEECTTS-CEEESSCC-----CTTCHHHHHHHHHHHTCC
T ss_pred ----CCCEEEEECCCC-eEEEccCC-----CCCHHHHHHHHHHHhccc
Confidence 136799999996 78886533 345577777777765443
No 81
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.48 E-value=1.9e-13 Score=122.11 Aligned_cols=148 Identities=9% Similarity=-0.019 Sum_probs=100.1
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
.++.+|+.+|.+.|++. +|++++++++ ++++ ||++|...|||.|+.++..|++++.++.
T Consensus 21 ~~~~~g~~~p~f~l~~~-------------------~G~~v~l~~~-~Gk~-vlv~F~atwC~~C~~~~~~l~~l~~~~~ 79 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDI-------------------DGHMVNLDKY-RGFV-CIVTNVASQGGKTEVNYTQLVDLHARYA 79 (185)
T ss_dssp GGGGGCCCGGGCEEEBT-------------------TSCEEEGGGG-TTSE-EEEEEECSSSTTHHHHHHHHHHHHHHHG
T ss_pred hhccCCCCcCCceeEcC-------------------CCCEeeHHHc-CCCE-EEEEEecCCCCchHHHHHHHHHHHHHhh
Confidence 45567778886665554 4999999996 5555 4555568999999999999999999999
Q ss_pred hcCCeEEEEecC--------ChhhHHhhhcC-CCCCceeee--ccch----HHHHHhCCCcccccccccccccCHHHHHH
Q 014901 278 ALGIQLFAVLHE--------YIESEVKDFWP-RYWGGVVVY--DQGM----EFFKALGGGKLLKDKFLSGFLLNPRAIAN 342 (416)
Q Consensus 278 alGV~LVaIspE--------s~~~~ik~F~~-~~l~f~VLs--Dp~r----~lYkALGl~r~~r~s~~sgfll~P~v~~~ 342 (416)
+.|+++|+|+.+ +++ .+++|.+ .+++|+++. |.+. .+|+.++-.. +
T Consensus 80 ~~~v~vv~is~d~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~-------------~----- 140 (185)
T 2gs3_A 80 ECGLRILAFPCNQFGKQEPGSNE-EIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQP-------------K----- 140 (185)
T ss_dssp GGTEEEEEEECCTTTTCCCSCHH-HHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSG-------------G-----
T ss_pred cCCeEEEEEECcccCCCCCCCHH-HHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhc-------------c-----
Confidence 999999999853 333 3677764 778899997 4443 2555443210 0
Q ss_pred HHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 014901 343 YKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 399 (416)
Q Consensus 343 ~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~ 399 (416)
..|+.+. ...-.|.+||||++| +|++.|... .+++++.+.+++
T Consensus 141 -----~~g~~~~---~i~~~P~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ 183 (185)
T 2gs3_A 141 -----GKGILGN---AIKWNFTKFLIDKNG-CVVKRYGPM-----EEPLVIEKDLPH 183 (185)
T ss_dssp -----GCCSSSS---SCCSSCCEEEECTTS-CEEEEECTT-----SCGGGGGGGHHH
T ss_pred -----cccccCC---cccccceEEEECCCC-CEEEeeCCC-----CCHHHHHHHHHH
Confidence 0011110 111258999999997 899998763 334555555443
No 82
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.45 E-value=7.2e-13 Score=132.75 Aligned_cols=156 Identities=11% Similarity=0.043 Sum_probs=116.8
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHH
Q 014901 188 AVPRVCGCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAH 267 (416)
Q Consensus 188 ~~~~~~g~~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~ 267 (416)
..+.+|.-....+.+|+.+|.|.+...-+. +.+|++++++++ +++++||.|+ ..|||.|+.++.
T Consensus 39 ~~l~~~~~~~~~l~vG~~aPdF~~~~~wL~--------------d~dG~~vsLsdl-~GK~vLl~F~-atwC~~C~~~~p 102 (352)
T 2hyx_A 39 AQLSNCSDGAAQLESCGTAPDLKGITGWLN--------------TPGNKPIDLKSL-RGKVVLIDFW-AYSCINCQRAIP 102 (352)
T ss_dssp TTGGGSCBSCSSCCCCCBCCCCCSCCEEES--------------SGGGCCCCGGGG-TTSEEEEEEE-CTTCHHHHHHHH
T ss_pred hhhhhhhhcccccCCCCcCCCccccccccC--------------CCCCCEEcHHHh-CCCEEEEEEE-CCCChhHHHHHH
Confidence 344555544456788888996652110022 224899999996 6677777777 599999999999
Q ss_pred HHHhccchhhhcCCeEEEEecC------ChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCcccccccccccccCHHHH
Q 014901 268 QLYAKKPIFDALGIQLFAVLHE------YIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAI 340 (416)
Q Consensus 268 ~Ls~~~peL~alGV~LVaIspE------s~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~ 340 (416)
.|.++..++.+.|+.+|+|+.+ +++ .++.|.+ ..++|+++.|++..+.++||+.
T Consensus 103 ~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~-~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~------------------ 163 (352)
T 2hyx_A 103 HVVGWYQAYKDSGLAVIGVHTPEYAFEKVPG-NVAKGAANLGISYPIALDNNYATWTNYRNR------------------ 163 (352)
T ss_dssp HHHHHHHHHGGGTEEEEEEECCSSGGGGCHH-HHHHHHHHHTCCSCEEECTTSHHHHHTTCC------------------
T ss_pred HHHHHHHHhhcCCeEEEEEECCcccccCCHH-HHHHHHHHcCCCccEEeCCcHHHHHHcCCC------------------
Confidence 9999999999889999999853 344 3677775 6789999999999999988773
Q ss_pred HHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 341 ANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 341 ~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
-.|.+||||++| +|++.|.+. .+.+++.+.++++..+.
T Consensus 164 --------------------~~Pt~~lID~~G-~Iv~~~~G~-----~~~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 164 --------------------YWPAEYLIDATG-TVRHIKFGE-----GDYNVTETLVRQLLNDA 201 (352)
T ss_dssp --------------------EESEEEEECTTS-BEEEEEESB-----CCHHHHHHHHHHHHHHH
T ss_pred --------------------ccCEEEEEeCCC-eEEEEEcCC-----CCHHHHHHHHHHHHhhc
Confidence 136899999996 899998764 35678877777765443
No 83
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.45 E-value=1.5e-13 Score=118.91 Aligned_cols=117 Identities=15% Similarity=0.145 Sum_probs=93.4
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC-------------------ChhhH
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE-------------------YIESE 294 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE-------------------s~~~~ 294 (416)
+|+.++++++ +++++||.|+ ..|||+|+.++..|.++..++. ++.+|+|+.+ +.+ .
T Consensus 26 ~g~~~~l~~~-~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~-~ 100 (165)
T 3ha9_A 26 DGEVISLNNV-GGDVVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPE-M 100 (165)
T ss_dssp TSCEECGGGC-CSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHH-H
T ss_pred CCCEeeHHHh-CCCEEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHH-H
Confidence 4999999996 6677878777 9999999999999999888887 9999999876 433 4
Q ss_pred HhhhcC-CCC-CceeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCC
Q 014901 295 VKDFWP-RYW-GGVVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGR 372 (416)
Q Consensus 295 ik~F~~-~~l-~f~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG 372 (416)
++.|.+ ..+ +|+++.| +..+.+.||+.. .|.+||||++|
T Consensus 101 ~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~--------------------------------------~P~~~lid~~G 141 (165)
T 3ha9_A 101 FRKFIANYGDPSWIMVMD-DGSLVEKFNVRS--------------------------------------IDYIVIMDKSS 141 (165)
T ss_dssp HHHHHHHHSCTTSEEEEC-CSHHHHHTTCCS--------------------------------------SSEEEEEETTC
T ss_pred HHHHHHHcCCCCeeEEeC-hHHHHHHhCCCC--------------------------------------ceEEEEEcCCC
Confidence 777775 677 9999999 889998887731 36899999997
Q ss_pred CcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 373 SGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 373 ~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
+|++ .+..++.+++.+.++++.
T Consensus 142 -~i~~------~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 142 -NVLY------AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp -CEEE------EEESCCHHHHHHHHHHC-
T ss_pred -cEEE------eCCCCCHHHHHHHHHHHh
Confidence 7888 233346788888877653
No 84
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.45 E-value=3.4e-13 Score=116.39 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=97.8
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.+.+|+.+|.+.|.+. +|++++++++ +++++||.|+- .|||.|+.++..|.++..++.+
T Consensus 5 ~~~~g~~~p~f~l~~~-------------------~g~~~~l~~~-~gk~vll~f~a-~~C~~C~~~~~~l~~l~~~~~~ 63 (170)
T 2p5q_A 5 TSKNPESVHDFTVKDA-------------------KENDVDLSIF-KGKVLLIVNVA-SKCGMTNSNYAEMNQLYEKYKD 63 (170)
T ss_dssp -----CCGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEEEEEC-SSSTTHHHHHHHHHHHHHHHGG
T ss_pred cCCCCccccceEEEcC-------------------CCCEecHHHh-CCCEEEEEEEe-ccCCccHHHHHHHHHHHHHhcc
Confidence 4467778886655554 4999999995 66777777765 8999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhhcC--CCCCceee--eccchH----HHHHhCCCcccccccccccccCHHHHHH
Q 014901 279 LGIQLFAVLHE--------YIESEVKDFWP--RYWGGVVV--YDQGME----FFKALGGGKLLKDKFLSGFLLNPRAIAN 342 (416)
Q Consensus 279 lGV~LVaIspE--------s~~~~ik~F~~--~~l~f~VL--sDp~r~----lYkALGl~r~~r~s~~sgfll~P~v~~~ 342 (416)
.|+++|+|+.+ +.+ .+++|.+ ..++|+++ .|++.. +|+.++-.
T Consensus 64 ~~~~vv~vs~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~-------------------- 122 (170)
T 2p5q_A 64 QGLEILAFPCNQFGEEEPGTND-QITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLG-------------------- 122 (170)
T ss_dssp GTEEEEEEECCTTTTCCCSCHH-HHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTH--------------------
T ss_pred CCEEEEEEECCCCCCCCCCCHH-HHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhc--------------------
Confidence 99999999863 444 3677765 47889998 677653 33322100
Q ss_pred HHHHHhcCCccccCCCCcccc---eEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 343 YKRARTLGVEQNFKGEGEIKG---GLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 343 ~~rA~~~G~~gn~~GD~lqlG---GtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|+. | ..+| .+||||++| +|++.|.+. .+++++.+.++.+.
T Consensus 123 -----~~~~~----~--~~~p~~~~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 123 -----KWGIF----G--DDIQWNFAKFLVNKDG-QVVDRYYPT-----TSPLSLERDIKQLL 167 (170)
T ss_dssp -----HHHTT----C--SCCCSTTCEEEECTTS-CEEEEECTT-----SCGGGGHHHHHHHT
T ss_pred -----CCCcc----C--CcccccccEEEECCCC-CEEEeeCCC-----CCHHHHHHHHHHHh
Confidence 00110 1 1234 899999997 899988653 34566666666653
No 85
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.44 E-value=7.9e-13 Score=118.51 Aligned_cols=134 Identities=13% Similarity=0.154 Sum_probs=93.4
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC--------ChhhHHhhhc-C-CCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE--------YIESEVKDFW-P-RYW 303 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE--------s~~~~ik~F~-~-~~l 303 (416)
+|++++++++ +++++||.|+ ..|||.|+.++..|.+++.++.+.|+++|+|+.+ +++ .+++|. + ..+
T Consensus 37 ~G~~~~l~~~-~Gk~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~-~~~~~~~~~~~~ 113 (190)
T 2vup_A 37 DHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEE-EIKEFVCTKFKA 113 (190)
T ss_dssp TSSBCCGGGG-TTSCEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHH-HHHHHHHHHHCC
T ss_pred CCCEEEHHHc-CCCEEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHH-HHHHHHHHhcCC
Confidence 4999999995 6677766665 6999999999999999999999999999999865 444 367776 4 678
Q ss_pred Cceeee--ccchH----HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEE
Q 014901 304 GGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAY 377 (416)
Q Consensus 304 ~f~VLs--Dp~r~----lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~y 377 (416)
+|+++. |++.. +|+.++ ....|+.+.. +.--.|.+||||++| +|++
T Consensus 114 ~~p~l~~~D~~~~~~~~~~~~l~-------------------------~~~~~v~~~P--~i~~~~~~~lid~~G-~i~~ 165 (190)
T 2vup_A 114 EFPIMAKINVNGENAHPLYEYMK-------------------------KTKPGILKTK--AIKWNFTSFLIDRDG-VPVE 165 (190)
T ss_dssp CSCBBCCCBSSSTTBCHHHHHHH-------------------------HHSCCGGGCC--SCCSTTCEEEECTTS-CEEE
T ss_pred CeEEEeecccCcccccHHHHHHH-------------------------hhcCCcCCCc--cccccceEEEECCCC-cEEE
Confidence 899997 55443 333221 1001111000 000134899999997 8999
Q ss_pred EEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 378 QFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 378 ah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
.+... .+++++.+.++.+.++
T Consensus 166 ~~~g~-----~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 166 RFSPG-----ASVKDIEKKLIPLLES 186 (190)
T ss_dssp EECTT-----CCHHHHHHHHHHHHHC
T ss_pred EECCC-----CCHHHHHHHHHHHHhh
Confidence 87653 4578888888776543
No 86
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.44 E-value=9.9e-13 Score=112.83 Aligned_cols=135 Identities=8% Similarity=-0.005 Sum_probs=99.1
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhh----cCCeEEEEecCC----hhhHHhhhcC-CCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDA----LGIQLFAVLHEY----IESEVKDFWP-RYW 303 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cn~el~~Ls~~~peL~a----lGV~LVaIspEs----~~~~ik~F~~-~~l 303 (416)
+|++++++++ +++++||.|+ ..|||. |+.++..|+++..++++ .++++|+|+.+. ++ .++.|.+ .++
T Consensus 12 ~G~~~~l~~~-~gk~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~-~~~~~~~~~~~ 88 (164)
T 2ggt_A 12 TGERKTDKDY-LGQWLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKE-AIANYVKEFSP 88 (164)
T ss_dssp TSCEEEGGGG-TTCEEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHH-HHHHHHHTTCS
T ss_pred CCCEEeHHHc-CCCEEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHH-HHHHHHHHcCC
Confidence 5999999996 6666666665 589997 99999999999999987 499999999653 44 3777775 678
Q ss_pred Cceee---eccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC--CcccceEEEEecCCCcEEEE
Q 014901 304 GGVVV---YDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE--GEIKGGLFIVGRGRSGIAYQ 378 (416)
Q Consensus 304 ~f~VL---sDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD--~lqlGGtFVId~gG~~I~ya 378 (416)
+|+++ .|+...+.++||+... |.. .+..++ ....+.+||||++| +|++.
T Consensus 89 ~~~~l~~~~d~~~~~~~~~~v~~~------------p~~-------------~~~~~~~~~~~~~~~~lid~~G-~i~~~ 142 (164)
T 2ggt_A 89 KLVGLTGTREEVDQVARAYRVYYS------------PGP-------------KDEDEDYIVDHTIIMYLIGPDG-EFLDY 142 (164)
T ss_dssp SCEEEECCHHHHHHHHHTTTCCEE------------EEE-------------ECTTSCEEEEECCEEEEECTTS-CEEEE
T ss_pred CeEEEeCCHHHHHHHHHhcCeEEE------------ecC-------------CCCCCCeeEeccceEEEECCCC-eEEEE
Confidence 88988 4777789999998521 110 000011 11246899999997 89998
Q ss_pred EecCCCCCCCCHHHHHHHHHhhhh
Q 014901 379 FIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 379 h~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
|... .+++++++.++.+..
T Consensus 143 ~~g~-----~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 143 FGQN-----KRKGEIAASIATHMR 161 (164)
T ss_dssp EETT-----CCHHHHHHHHHHHHG
T ss_pred eCCC-----CCHHHHHHHHHHHHH
Confidence 8653 467889888887654
No 87
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.44 E-value=6.7e-13 Score=117.63 Aligned_cols=146 Identities=11% Similarity=0.064 Sum_probs=104.1
Q ss_pred CCCCCCC-ccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCc-chHHHHHHHHhccchhhh
Q 014901 201 VNEKVAP-YSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCI-MCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 201 ~~~~~ap-l~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP-~Cn~el~~Ls~~~peL~a 278 (416)
..|+.+| .|.|.+. +|++|+++++ +++++||. |-..||| .|..++..|++++.++.+
T Consensus 2 ~~G~~~P~~f~l~d~-------------------~G~~v~l~~~-~Gk~vll~-F~~t~C~~~C~~~~~~l~~~~~~~~~ 60 (170)
T 3me7_A 2 SLGTYVPGDITLVDS-------------------YGNEFQLKNL-KGKPIILS-PIYTHCRAACPLITKSLLKVIPKLGT 60 (170)
T ss_dssp CTTCBCCTTCEEEET-------------------TCCEEEGGGG-TTSCEEEE-EECTTCCSHHHHHHHHHHTTHHHHCC
T ss_pred CCCCcCCCCeEEEcC-------------------CcCEEchHHh-CCCEEEEE-EECCCCCchhHHHHHHHHHHHHHhhh
Confidence 3577788 7777665 5999999996 55565555 4578998 699999999999999976
Q ss_pred --cCCeEEEEecC---ChhhHHhhhcC-CCCCce---e-e-ec--cchHHHHHhCCCcccccccccccccCHHHHHHHHH
Q 014901 279 --LGIQLFAVLHE---YIESEVKDFWP-RYWGGV---V-V-YD--QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKR 345 (416)
Q Consensus 279 --lGV~LVaIspE---s~~~~ik~F~~-~~l~f~---V-L-sD--p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~r 345 (416)
.++++|+|+.+ +++. ++.|.+ .+.+++ + + .| ...+++++||+.- . +
T Consensus 61 ~~~~~~vv~is~d~~d~~~~-~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~-----------~-~-------- 119 (170)
T 3me7_A 61 PGKDFWVITFTFDPKDTLED-IKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRF-----------M-T-------- 119 (170)
T ss_dssp BTTTBEEEEEECCTTCCHHH-HHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCC-----------E-E--------
T ss_pred cCCceEEEEEECCCCCCHHH-HHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEE-----------e-c--------
Confidence 45999999964 4443 677764 444443 2 2 23 4468888888751 0 1
Q ss_pred HHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 346 ARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 346 A~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
. .+.....|.+||||++| +|++.|.+. .+++++|+++++++..
T Consensus 120 ---~------~~~~~~~~~~~lID~~G-~i~~~~~g~----~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 120 ---A------GNDFIHPNVVVVLSPEL-QIKDYIYGV----NYNYLEFVNALRLARG 162 (170)
T ss_dssp ---E------TTEEECCCEEEEECTTS-BEEEEEESS----SCCHHHHHHHHHHHTT
T ss_pred ---C------CCccccCceEEEECCCC-eEEEEEeCC----CCCHHHHHHHHHHhhc
Confidence 0 01122357899999997 899988554 4679999999988754
No 88
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.42 E-value=6.8e-13 Score=118.86 Aligned_cols=145 Identities=12% Similarity=0.145 Sum_probs=100.4
Q ss_pred CCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 199 PPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 199 a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
....+..+|.|.|.+. +|++++++++ +++++||.|+ ..|||.|..++..|.+++.++++
T Consensus 19 ~~~~~~~~p~f~l~d~-------------------~G~~~~l~~~-~Gk~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~ 77 (187)
T 3dwv_A 19 KMSAASSIFDFEVLDA-------------------DHKPYNLVQH-KGSPLLIYNV-ASKCGYTKGGYETATTLYNKYKS 77 (187)
T ss_dssp -CTTCCSGGGSCCBBT-------------------TSCBCCGGGG-TTSCEEEEEE-CCBCSCCTTHHHHHHHHHHHHGG
T ss_pred hhcCCCccCCeEEEcC-------------------CCCEeeHHHh-CCCEEEEEEe-cCCCCCcHHHHHHHHHHHHHhhh
Confidence 3455566775555554 4999999995 6666655554 89999999999999999999999
Q ss_pred cCCeEEEEecC--------ChhhHHhhhcC-C-CCCceeee--ccchH----HHHHhCCCcccccccccccccCHHHHHH
Q 014901 279 LGIQLFAVLHE--------YIESEVKDFWP-R-YWGGVVVY--DQGME----FFKALGGGKLLKDKFLSGFLLNPRAIAN 342 (416)
Q Consensus 279 lGV~LVaIspE--------s~~~~ik~F~~-~-~l~f~VLs--Dp~r~----lYkALGl~r~~r~s~~sgfll~P~v~~~ 342 (416)
.|+++|+|+.+ +.+ .+++|.+ + .++|++++ |.+.. +|+.+
T Consensus 78 ~~~~vi~is~d~~~~~e~~~~~-~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l----------------------- 133 (187)
T 3dwv_A 78 QGFTVLAFPSNQFGGQEPGNEE-EIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYM----------------------- 133 (187)
T ss_dssp GTCEEEEEEBCCCSSCSSSBTT-HHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHH-----------------------
T ss_pred CCeEEEEEECcccCCCCCCCHH-HHHHHHHhccCCCCceeeccccCCcchhHHHHHH-----------------------
Confidence 99999999853 344 4788886 5 78999997 44332 22211
Q ss_pred HHHHHhcCCccccCCCCcccc---eEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 343 YKRARTLGVEQNFKGEGEIKG---GLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 343 ~~rA~~~G~~gn~~GD~lqlG---GtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
+....+.. | .-.+| .+||||++| +|++.|... .+++++.+.++.+-
T Consensus 134 --~~~~~~~~----~-~~~iP~~~~~~liD~~G-~i~~~~~g~-----~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 134 --KKTKPGIL----A-TKAIKWNFTSFLIDRDG-VPVERFSPG-----ASVKDIEEKLIPLL 182 (187)
T ss_dssp --HHHSCCSB----S-SSSCCSTTCEEEECTTS-CEEEEECTT-----CCHHHHHHHHHHHC
T ss_pred --HhhcCCcc----C-CCccccceeEEEECCCC-CEEEEECCC-----CCHHHHHHHHHHHH
Confidence 11000110 1 11245 899999997 899998743 56778888777664
No 89
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.42 E-value=4.3e-13 Score=117.62 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=83.2
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec--------CChhhHHhhhc-C-CCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH--------EYIESEVKDFW-P-RYW 303 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp--------Es~~~~ik~F~-~-~~l 303 (416)
+|++++++++ +++++||.|+ ..|||.|+ ++..|.++..++.+.|+.+|+|+. ++.+ .++.|. + ..+
T Consensus 21 ~G~~~~l~~~-~Gk~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~-~~~~~~~~~~~~ 96 (171)
T 3cmi_A 21 KGQPFPFDQL-KGKVVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDE-EIAQFCQLNYGV 96 (171)
T ss_dssp TSCBCCGGGG-TTCEEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-------------------CC
T ss_pred CCCEecHHHc-CCCEEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHH-HHHHHHHhccCC
Confidence 5999999996 6778888877 89999999 999999999999999999999986 3344 367776 5 678
Q ss_pred Cceeeeccch------HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccc------eEEEEecC
Q 014901 304 GGVVVYDQGM------EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKG------GLFIVGRG 371 (416)
Q Consensus 304 ~f~VLsDp~r------~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlG------GtFVId~g 371 (416)
+|++++|++. .+|+.+ .....|+ ...| .+||||++
T Consensus 97 ~~p~~~d~d~~~~~~~~~~~~~-------------------------~~~~~~v--------~~~P~i~~~~~~~lid~~ 143 (171)
T 3cmi_A 97 TFPIMKKIDVNGGNEDPVYKFL-------------------------KSQKSGM--------LGLRGIKWNFEKFLVDKK 143 (171)
T ss_dssp CSCBBCCCBSSSTTBCHHHHHH-------------------------HHHSCCS--------SSCCSCCSTTCEEEECSS
T ss_pred CceEEeeccCCCccchHHHHHH-------------------------HhccCCc--------CCCCcccccceEEEECCC
Confidence 9999997652 122211 0000111 1134 89999999
Q ss_pred CCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 372 RSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 372 G~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
| +|++.+.+. .+++++.+.++.+.
T Consensus 144 G-~i~~~~~g~-----~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 144 G-KVYERYSSL-----TKPSSLSETIEELL 167 (171)
T ss_dssp S-CEEEEECTT-----SCGGGGHHHHHHHH
T ss_pred C-CEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 7 899988752 34566666666554
No 90
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.41 E-value=3.2e-12 Score=108.48 Aligned_cols=144 Identities=15% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+.+|+.+|.+.+.+. .+.. .. -..|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..+
T Consensus 6 ~~~~~g~~~p~f~l~~~-----~g~~----~~--~~~~~~~~l~~~-~gk~~ll~f~-~~~C~~C~~~~~~l~~l~~~-- 70 (156)
T 1kng_A 6 PSALIGRPAPQTALPPL-----EGLQ----AD--NVQVPGLDPAAF-KGKVSLVNVW-ASWCVPCHDEAPLLTELGKD-- 70 (156)
T ss_dssp ------CBCCCCCBCCC-----TTCE----ET--TEECCCBCGGGG-TTSCEEEEEE-CTTCHHHHHHHHHHHHHTTC--
T ss_pred hhHHhCCCCCCceeeec-----cCcc----cc--cccCceechHHh-CCCEEEEEEE-cccCHhHHHHHHHHHHHHhc--
Confidence 35677888886665554 2000 00 001389999996 5778888777 59999999999999987765
Q ss_pred hcCCeEEEEecCChhhHHhhhcC-CCCCce-eeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCcccc
Q 014901 278 ALGIQLFAVLHEYIESEVKDFWP-RYWGGV-VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNF 355 (416)
Q Consensus 278 alGV~LVaIspEs~~~~ik~F~~-~~l~f~-VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~ 355 (416)
.++.+|+|+.+.....++.|.. ++++|+ ++.|++..+++.||+.
T Consensus 71 -~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--------------------------------- 116 (156)
T 1kng_A 71 -KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY--------------------------------- 116 (156)
T ss_dssp -TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC---------------------------------
T ss_pred -CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC---------------------------------
Confidence 3599999996544444777775 678898 9999999999988773
Q ss_pred CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 356 KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 356 ~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|.+||||++| +|++.+.+. .+.+++.+.++.+.
T Consensus 117 -----~~P~~~~id~~G-~i~~~~~g~-----~~~~~l~~~l~~~l 151 (156)
T 1kng_A 117 -----GVPETFVVGREG-TIVYKLVGP-----ITPDNLRSVLLPQM 151 (156)
T ss_dssp -----SSCEEEEECTTS-BEEEEEESC-----CCHHHHHHTHHHHH
T ss_pred -----ccCeEEEEcCCC-CEEEEEeCC-----CCHHHHHHHHHHHH
Confidence 146899999996 899887653 35677777666654
No 91
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.41 E-value=4.3e-13 Score=115.99 Aligned_cols=135 Identities=11% Similarity=0.040 Sum_probs=98.0
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhhc---CCeEEEEecC----ChhhHHhhhcC-CCCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDAL---GIQLFAVLHE----YIESEVKDFWP-RYWG 304 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cn~el~~Ls~~~peL~al---GV~LVaIspE----s~~~~ik~F~~-~~l~ 304 (416)
+| +++++++ +++++ |++|...|||. |+.++..|.++..++.+. ++++|+|+.+ +++. ++.|.+ ..++
T Consensus 25 ~g-~~~l~~~-~gk~v-ll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~-~~~~~~~~~~~ 100 (172)
T 2k6v_A 25 QG-PVRLSQF-QDKVV-LLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEV-ADRYAKAFHPS 100 (172)
T ss_dssp SS-EEEGGGS-TTSEE-EEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHH-HHHHHHHHCTT
T ss_pred CC-CCcHHHh-CCCEE-EEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHH-HHHHHHHhCCC
Confidence 49 9999996 55554 55555789995 999999999999999876 7999999943 4443 777775 6789
Q ss_pred ceeeeccc---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEec
Q 014901 305 GVVVYDQG---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIE 381 (416)
Q Consensus 305 f~VLsDp~---r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d 381 (416)
|++++|++ ..++++||+... ..+. .....+ .....|.+|||| +| +|++.|..
T Consensus 101 ~~~l~d~~~~~~~~~~~~gv~~~----------~~~~-----------~~~~~~--~i~~~P~~~lid-~G-~i~~~~~g 155 (172)
T 2k6v_A 101 FLGLSGSPEAVREAAQTFGVFYQ----------KSQY-----------RGPGEY--LVDHTATTFVVK-EG-RLVLLYSP 155 (172)
T ss_dssp EEEECCCHHHHHHHHHHHTCCEE----------EEEE-----------EETTEE--EEEECCCEEEEE-TT-EEEEEECH
T ss_pred cEEEeCCHHHHHHHHHhcCeEEE----------eccC-----------CCCCCc--eEecCCEEEEEE-CC-EEEEEECC
Confidence 99999999 689999998520 0000 000000 012368999999 86 89999876
Q ss_pred CCCCCCCCHHHHHHHHHhh
Q 014901 382 RNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 382 ~d~gDrad~~eVLaAlk~l 400 (416)
.. .++.++|++.++++
T Consensus 156 ~~---~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 156 DK---AEATDRVVADLQAL 171 (172)
T ss_dssp HH---HTCHHHHHHHHHHC
T ss_pred CC---CCCHHHHHHHHHHh
Confidence 64 45788998888764
No 92
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.40 E-value=4e-12 Score=109.03 Aligned_cols=122 Identities=13% Similarity=0.138 Sum_probs=98.0
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC------ChhhHHhhhcC-CCCC-c
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE------YIESEVKDFWP-RYWG-G 305 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE------s~~~~ik~F~~-~~l~-f 305 (416)
+|+.+++.++ +++++||.|+ ..|||.|+.++..|.++..++...|+++|+|+.+ +.+ .++.|.. ..++ +
T Consensus 27 ~g~~~~~~~~-~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~-~~~~~~~~~~~~~~ 103 (164)
T 2h30_A 27 DNRPASVYLK-KDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG-EFQKWYAGLNYPKL 103 (164)
T ss_dssp TSSBGGGGCC-TTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT-HHHHHHTTSCCTTS
T ss_pred CCCEeeHHHh-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH-HHHHHHHhCCCCcc
Confidence 5999999884 7788888888 8999999999999999999999999999999842 233 3566554 4677 8
Q ss_pred eeeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCC
Q 014901 306 VVVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG 385 (416)
Q Consensus 306 ~VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~g 385 (416)
+++.|++..+++.||+. -.|.+||||++| +|++.+.+.
T Consensus 104 ~~~~d~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~~g~--- 141 (164)
T 2h30_A 104 PVVTDNGGTIAQNLNIS--------------------------------------VYPSWALIGKDG-DVQRIVKGS--- 141 (164)
T ss_dssp CEEECTTCHHHHHTTCC--------------------------------------SSSEEEEECTTS-CEEEEEESC---
T ss_pred eEEEcCchHHHHHcCCC--------------------------------------ccceEEEECCCC-cEEEEEcCC---
Confidence 89999999999988873 136899999996 899988763
Q ss_pred CCCCHHHHHHHHHhhhh
Q 014901 386 DWAPLAEVIEICTQLQD 402 (416)
Q Consensus 386 Drad~~eVLaAlk~l~~ 402 (416)
.+.+++.+.++.+..
T Consensus 142 --~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 142 --INEAQALALIRNPNA 156 (164)
T ss_dssp --CCHHHHHHHHHCTTC
T ss_pred --CCHHHHHHHHHHHHH
Confidence 357788888777643
No 93
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.38 E-value=7.3e-13 Score=117.87 Aligned_cols=147 Identities=11% Similarity=-0.032 Sum_probs=93.9
Q ss_pred CCCCCCCCCCccccccccccccchhhhccccccccCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh
Q 014901 198 APPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 198 ~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~ 277 (416)
..+++|+.+|.+.|++. +|++++++++ +++++|| +|...|||.|+.++..|.+++.++.
T Consensus 21 ~~~~~g~~~p~f~l~~~-------------------~G~~~~l~~~-~Gk~vlv-~F~atwC~~C~~~~p~l~~l~~~~~ 79 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNI-------------------RGKLVSLEKY-RGSVSLV-VNVASECGFTDQHYRALQQLQRDLG 79 (181)
T ss_dssp ------CCGGGCEEEBT-------------------TSCEEEGGGG-TTSEEEE-EEECSSSTTHHHHHHHHHHHHHHHG
T ss_pred CcCCcCCccCceEeecC-------------------CCCEecHHHc-CCCEEEE-EEeccCCCCcHHHHHHHHHHHHHhh
Confidence 35677888886666554 4999999995 6555555 4557899999999999999999999
Q ss_pred hcCCeEEEEecC--------ChhhHHhhhcC--CCCCceeeec--cchHHHHHhCCCcccccccccccccCHHHHHHHHH
Q 014901 278 ALGIQLFAVLHE--------YIESEVKDFWP--RYWGGVVVYD--QGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKR 345 (416)
Q Consensus 278 alGV~LVaIspE--------s~~~~ik~F~~--~~l~f~VLsD--p~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~r 345 (416)
+.|+++|+|+.+ +.+ .++.|.+ ..++|+++.| .+..... +. +.....
T Consensus 80 ~~~v~vv~vs~d~~~~~e~~~~~-~~~~~~~~~~~~~~p~~~~~d~~g~~~~-------------------~~-~~~~~~ 138 (181)
T 2p31_A 80 PHHFNVLAFPCNQFGQQEPDSNK-EIESFARRTYSVSFPMFSKIAVTGTGAH-------------------PA-FKYLAQ 138 (181)
T ss_dssp GGTEEEEEEECCCSTTCCCSCHH-HHHHHHHHHHCCCSCBBCCCCCSSTTSC-------------------HH-HHHHHH
T ss_pred cCCEEEEEEECcCCCCCCCCCHH-HHHHHHHhhcCCCceeEeecccCCccch-------------------hh-hhhhhh
Confidence 999999999864 344 3666764 5788999864 3322100 00 000000
Q ss_pred HHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 346 ARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 346 A~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
. +++.. .|. -.+||||++| +|++.|... .+++++.+.++++
T Consensus 139 ~----~P~~~---~~~-~~~~lid~~G-~i~~~~~g~-----~~~~~l~~~i~~l 179 (181)
T 2p31_A 139 T----SGKEP---TWN-FWKYLVAPDG-KVVGAWDPT-----VSVEEVRPQITAL 179 (181)
T ss_dssp H----HSCCC---CST-TCEEEECTTS-CEEEEECTT-----SCHHHHHHHHHTT
T ss_pred c----CCCcc---ccc-eeEEEEcCCC-CEEEEeCCC-----CCHHHHHHHHHHH
Confidence 0 11000 000 0799999997 899988753 4678888877764
No 94
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.36 E-value=1.1e-11 Score=107.27 Aligned_cols=137 Identities=7% Similarity=-0.002 Sum_probs=99.8
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhh----cCCeEEEEecC----ChhhHHhhhcC-CCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDA----LGIQLFAVLHE----YIESEVKDFWP-RYW 303 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cn~el~~Ls~~~peL~a----lGV~LVaIspE----s~~~~ik~F~~-~~l 303 (416)
+|++++++++ ++++ ||++|...|||. |+.++..|+++..++.+ .++++|+|+.+ +++ .++.|.+ ..+
T Consensus 15 ~G~~~~l~~~-~gk~-vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~-~~~~~~~~~~~ 91 (171)
T 2rli_A 15 RGRARCKADF-RGQW-VLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVE-AMARYVQDFHP 91 (171)
T ss_dssp TSCEEETTTT-TTSE-EEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHH-HHHHHHHTTCT
T ss_pred CCCEEeHHHh-CCCE-EEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHH-HHHHHHHHcCC
Confidence 5999999996 5555 555556899997 99999999999999976 58999999965 344 3777775 678
Q ss_pred Cceeeeccc---hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCC--CcccceEEEEecCCCcEEEE
Q 014901 304 GGVVVYDQG---MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGE--GEIKGGLFIVGRGRSGIAYQ 378 (416)
Q Consensus 304 ~f~VLsDp~---r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD--~lqlGGtFVId~gG~~I~ya 378 (416)
+|+++.|.. ..++++||+... |.. ....++ ....|.+||||++| +|++.
T Consensus 92 ~~~~l~~~~~~~~~~~~~~~v~~~------------p~~-------------~~~~~~~~~~~~~~~~lid~~G-~i~~~ 145 (171)
T 2rli_A 92 RLLGLTGSTKQVAQASHSYRVYYN------------AGP-------------KDEDQDYIVDHSIAIYLLNPDG-LFTDY 145 (171)
T ss_dssp TCCEEECCHHHHHHHHHHSCCCCE------------ECC-------------CCSSCCCCEECCCEEEEECTTS-CEEEE
T ss_pred CeEEEeCCHHHHHHHHHHhCeEEE------------ecC-------------CCCCCCeEEeccceEEEECCCC-eEEEE
Confidence 889998754 578999998521 100 000111 12357999999997 89998
Q ss_pred EecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 379 FIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 379 h~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
|... .+.+++++.++++..+.
T Consensus 146 ~~g~-----~~~~~l~~~l~~ll~~~ 166 (171)
T 2rli_A 146 YGRS-----RSAEQISDSVRRHMAAF 166 (171)
T ss_dssp EESS-----CCHHHHHHHHHHHHHHH
T ss_pred ECCC-----CCHHHHHHHHHHHHHHH
Confidence 8754 46788998888876543
No 95
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.34 E-value=1.1e-11 Score=114.13 Aligned_cols=171 Identities=9% Similarity=-0.009 Sum_probs=98.1
Q ss_pred CcccccccCCCCCCCCCCCCccccccccccccchhhhccccccccCC-CCceechhhccCCCEEEEeecCCCCcchHHHH
Q 014901 188 AVPRVCGCIQAPPVNEKVAPYSAIENISIQKLTPEYKIGMERLVKTK-TPPMKALELWRESPAVLLCIRRPGCIMCRAEA 266 (416)
Q Consensus 188 ~~~~~~g~~~~a~~~~~~apl~~L~d~~l~~l~~~~~~g~~~~v~~~-G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el 266 (416)
+++++++|-- ..+..+|.|.+++. + |++|+++++ +++++||.|+ ..|||.|+.++
T Consensus 11 ~~~~~~~~~~---~~~~~~p~f~l~~~-------------------~~G~~v~l~~~-~Gk~vlv~Fw-atwC~~C~~e~ 66 (208)
T 2f8a_A 11 VDLGTENLYF---QSMQSVYAFSARPL-------------------AGGEPVSLGSL-RGKVLLIENV-ASLGGTTVRDY 66 (208)
T ss_dssp --------------CCCCGGGCEECBT-------------------TCSSCEEGGGG-TTSEEEEEEE-CSSSTTHHHHH
T ss_pred ccccccccch---hhcCccCceEeeeC-------------------CCCCCccHHHc-CCCEEEEEEE-CCCCccHHHHH
Confidence 4455555544 33455776655554 5 899999995 6666655555 88999999999
Q ss_pred HHHHhccchhhhcCCeEEEEecC--------ChhhHHhhhc-------CCCCCceeeeccch------HHHHHhCCCcc-
Q 014901 267 HQLYAKKPIFDALGIQLFAVLHE--------YIESEVKDFW-------PRYWGGVVVYDQGM------EFFKALGGGKL- 324 (416)
Q Consensus 267 ~~Ls~~~peL~alGV~LVaIspE--------s~~~~ik~F~-------~~~l~f~VLsDp~r------~lYkALGl~r~- 324 (416)
..|.+++.++.+.|+++|+|+.+ +.+ .++.|. +..++|++++|.+. .+|+.++-...
T Consensus 67 p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~-~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~ 145 (208)
T 2f8a_A 67 TQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE-EILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPA 145 (208)
T ss_dssp HHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH-HHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCS
T ss_pred HHHHHHHHHccCCCeEEEEEECCcccccCCCCHH-HHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCC
Confidence 99999999999999999999863 233 377776 35688999986542 34443211000
Q ss_pred cccccccccccCHHHHHHHHHHHhcCC-cccc-CCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 325 LKDKFLSGFLLNPRAIANYKRARTLGV-EQNF-KGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 325 ~r~s~~sgfll~P~v~~~~~rA~~~G~-~gn~-~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
.... ...++..+. +. .+.+ +++..-.|.+||||++| +|++.|... .++++|.+.++.+.
T Consensus 146 ~~~~-~~~~~~~~~-----------~~~~~~~~~~~i~~~p~tflID~~G-~i~~~~~g~-----~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 146 PSDD-ATALMTDPK-----------LITWSPVCRNDVAWNFEKFLVGPDG-VPLRRYSRR-----FQTIDIEPDIEALL 206 (208)
T ss_dssp CTTC-SSCCCSSGG-----------GCCSSSCCTTCCCSTTCEEEECTTS-CEEEEECTT-----SCGGGGHHHHHHHH
T ss_pred cccc-chhhccccc-----------cccccccccCccccCceEEEEcCCC-cEEEEeCCC-----CCHHHHHHHHHHHh
Confidence 0000 000000000 00 0001 11222248999999997 899998753 23456666666553
No 96
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.34 E-value=2.9e-12 Score=113.62 Aligned_cols=76 Identities=11% Similarity=0.001 Sum_probs=61.9
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec--------CChhhHHhhhcC--CCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH--------EYIESEVKDFWP--RYW 303 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp--------Es~~~~ik~F~~--~~l 303 (416)
+|++|+++++ ++ ++||++|...|||.|+.++..|.++..++.+.|+.+|+|+. ++.+. ++.|.+ .++
T Consensus 27 ~G~~v~l~~~-~G-k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~-~~~~~~~~~~~ 103 (180)
T 3kij_A 27 KGRTVSLEKY-KG-KVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKE-VESFARKNYGV 103 (180)
T ss_dssp TSCEEEGGGG-TT-SEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHH-HHHHHHHHHCC
T ss_pred CCCEecHHHc-CC-CEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHH-HHHHHHHhcCC
Confidence 4999999996 54 46777778899999999999999999999999999999983 45553 677764 578
Q ss_pred Cceeeeccc
Q 014901 304 GGVVVYDQG 312 (416)
Q Consensus 304 ~f~VLsDp~ 312 (416)
+|+++.|.+
T Consensus 104 ~~~~~~~~d 112 (180)
T 3kij_A 104 TFPIFHKIK 112 (180)
T ss_dssp CSCBBCCCC
T ss_pred CCceeeeee
Confidence 888887543
No 97
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.33 E-value=8.2e-12 Score=113.34 Aligned_cols=141 Identities=9% Similarity=0.029 Sum_probs=91.6
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcc-hHHHHHHHHhccchhhhc---CCeEEEEecC----ChhhHHhhhcC-CCCC
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIM-CRAEAHQLYAKKPIFDAL---GIQLFAVLHE----YIESEVKDFWP-RYWG 304 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~-Cn~el~~Ls~~~peL~al---GV~LVaIspE----s~~~~ik~F~~-~~l~ 304 (416)
+|++++++++ +++++||.|+ ..|||. |+.++..|.+++.++.+. ++++|+|+.+ +++ .++.|.+ ...+
T Consensus 30 ~G~~v~l~~~-~Gk~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~-~~~~~~~~~~~~ 106 (200)
T 2b7k_A 30 YGNEFTEKNL-LGKFSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPA-VLKEYLSDFHPS 106 (200)
T ss_dssp TSCEEEGGGG-TTSCEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHH-HHHHHHTTSCTT
T ss_pred CCCEEeHHHc-CCCEEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHH-HHHHHHHHcCCC
Confidence 4999999996 6666665554 889996 999999999999999864 8999999976 454 3777875 5567
Q ss_pred ceeee---ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEec
Q 014901 305 GVVVY---DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIE 381 (416)
Q Consensus 305 f~VLs---Dp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d 381 (416)
|..+. |....+.++||+.. . . |.... .|. ++ .....|.+||||++| +|++.|..
T Consensus 107 ~~~l~~~~d~~~~~~~~~gv~~----~------~-p~~~~-------~~~--~~--~~~~~~~~~liD~~G-~i~~~~~g 163 (200)
T 2b7k_A 107 ILGLTGTFDEVKNACKKYRVYF----S------T-PPNVK-------PGQ--DY--LVDHSIFFYLMDPEG-QFVDALGR 163 (200)
T ss_dssp CEEEECCHHHHHHHHHHTTC------------------------------------CTTTCCCEEEECTTS-CEEEEECT
T ss_pred ceEEeCCHHHHHHHHHHcCcEE----e------e-ccccC-------CCC--Cc--eeeecceEEEECCCC-cEEEEeCC
Confidence 77776 45678999999841 0 1 21100 000 00 011247899999997 89988864
Q ss_pred CCCCCCCCHHHHHHHHHhhh
Q 014901 382 RNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 382 ~d~gDrad~~eVLaAlk~l~ 401 (416)
. .....-.++|.+.++.+.
T Consensus 164 ~-~~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 164 N-YDEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp T-CCTTHHHHHHHHHHHHCC
T ss_pred C-CCHHHHHHHHHHHHHHhh
Confidence 3 221222344444444443
No 98
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.32 E-value=3.5e-11 Score=112.39 Aligned_cols=145 Identities=12% Similarity=-0.020 Sum_probs=91.1
Q ss_pred C-CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec--------CChhhHHhhhcC----
Q 014901 234 K-TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH--------EYIESEVKDFWP---- 300 (416)
Q Consensus 234 ~-G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp--------Es~~~~ik~F~~---- 300 (416)
+ |++|+|+++ +++++ |++|--.|||+|+ ++.+|++++.++.+.|+.+|+|+. ++.+ .+++|.+
T Consensus 44 ~~G~~v~Lsd~-~GKvv-ll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~-~i~~f~~~~~~ 119 (215)
T 2i3y_A 44 NKNEYVSFKQY-VGKHI-LFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK-EILPGLKYVRP 119 (215)
T ss_dssp SSSCEEEGGGG-TTSEE-EEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH-HHHHHHHHTSS
T ss_pred CCCCEEcHHHh-CCCEE-EEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHH-HHHHHHHhccc
Confidence 6 899999995 65554 5555688999999 999999999999999999999983 2333 3777764
Q ss_pred ---CCCCceeeeccc------hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC-CCCcccceEEEEec
Q 014901 301 ---RYWGGVVVYDQG------MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK-GEGEIKGGLFIVGR 370 (416)
Q Consensus 301 ---~~l~f~VLsDp~------r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~-GD~lqlGGtFVId~ 370 (416)
..++|++++|.+ ..+|+.+.-.. .. ..+++-.|.. .+.+... +..--.|.+||||+
T Consensus 120 ~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~---~~-~~~~~g~~~~----------~~~~p~~~~~i~~npttfLID~ 185 (215)
T 2i3y_A 120 GGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSC---PH-PSEILGTFKS----------ISWDPVKVHDIRWNFEKFLVGP 185 (215)
T ss_dssp CTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS---CC-SCSCCCCTTT----------CCSSSCCTTCCCSTTCEEEECT
T ss_pred hhccCccceeEeeeccCCcccchHHHHHHhhC---cc-cccccccccc----------cccccccccccccCceEEEECC
Confidence 468999998754 23455331100 00 0000000000 0000000 11111378999999
Q ss_pred CCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 371 GRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 371 gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
+| +|++.|... .+++++.+.++.+..
T Consensus 186 ~G-~vv~~~~g~-----~~~~~l~~~I~~ll~ 211 (215)
T 2i3y_A 186 DG-IPVMRWSHR-----ATVSSVKTDILAYLK 211 (215)
T ss_dssp TS-CEEEEECTT-----SCHHHHHHHHHHHGG
T ss_pred CC-eEEEEeCCC-----CCHHHHHHHHHHHHH
Confidence 97 899988643 456788777777653
No 99
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.28 E-value=5.5e-11 Score=110.03 Aligned_cols=145 Identities=12% Similarity=-0.007 Sum_probs=90.2
Q ss_pred C-CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec--------CChhhHHhhhcC----
Q 014901 234 K-TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH--------EYIESEVKDFWP---- 300 (416)
Q Consensus 234 ~-G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp--------Es~~~~ik~F~~---- 300 (416)
+ |++|+|+++ ++++ ||++|--.|||.| .++.+|++++.++.+.|+.+|+|+. ++.+ .++.|.+
T Consensus 26 ~~G~~v~Ls~~-kGKv-vll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~-~i~~f~~~~~~ 101 (207)
T 2r37_A 26 DGEEYIPFKQY-AGKY-VLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENS-EILPTLKYVRP 101 (207)
T ss_dssp TSSCEEEGGGG-TTSE-EEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHH-HHHHHHHHTSS
T ss_pred CCCCEEcHHHh-CCCE-EEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHH-HHHHHHHhcch
Confidence 6 899999996 6555 5555568899999 7999999999999999999999983 3334 3777764
Q ss_pred ---CCCCceeeeccc------hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccC-CCCcccceEEEEec
Q 014901 301 ---RYWGGVVVYDQG------MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFK-GEGEIKGGLFIVGR 370 (416)
Q Consensus 301 ---~~l~f~VLsDp~------r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~-GD~lqlGGtFVId~ 370 (416)
..++|++++|.+ ..+|+.+.-.. ....+..-.|.. . +.+... ++.--.|.+||||+
T Consensus 102 ~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~----~~~~~~~g~~~~---------~-~~~p~~~~~i~~~~ttflID~ 167 (207)
T 2r37_A 102 GGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC----PPTSELLGTSDR---------L-FWEPMKVHDIRWNFEKFLVGP 167 (207)
T ss_dssp CTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS----CCSCSCCCCGGG---------B-CCSSCCTTCCCSTTCEEEECT
T ss_pred hhccCccceeeeEeccCCcccchHHHHHHhhC----cccccccccccc---------c-cccccccCcccccceEEEECC
Confidence 568999998754 23444331100 000000000000 0 000000 11111378999999
Q ss_pred CCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 371 GRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 371 gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
+| +|++.|... .+++++.+.++.+..
T Consensus 168 ~G-~i~~~~~g~-----~~~~~l~~~I~~ll~ 193 (207)
T 2r37_A 168 DG-IPIMRWHHR-----TTVSNVKMDILSYMR 193 (207)
T ss_dssp TS-CEEEEECTT-----SCHHHHHHHHHHHHH
T ss_pred CC-cEEEEECCC-----CCHHHHHHHHHHHHh
Confidence 97 899988643 346777777766643
No 100
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.25 E-value=1e-11 Score=104.98 Aligned_cols=108 Identities=10% Similarity=-0.021 Sum_probs=81.7
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-cCCeEEEEecCChhhHHhhhcC-CC-CCceeee-
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEYIESEVKDFWP-RY-WGGVVVY- 309 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a-lGV~LVaIspEs~~~~ik~F~~-~~-l~f~VLs- 309 (416)
+|+.++++++ +++++||.|+. .|||.|+.++..|.++..++.+ .++.+|+|+.+.....++.|.+ .. ..++++.
T Consensus 17 ~g~~~~l~~~-~gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 94 (144)
T 1i5g_A 17 AAADIALPSL-AGKTVFFYFSA-SWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDR 94 (144)
T ss_dssp TEEEEEGGGG-TTSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCH
T ss_pred CCCEecHHHc-CCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCch
Confidence 4899999996 66777777765 8999999999999999988884 6999999998754444777775 22 3455554
Q ss_pred ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEe-cCCCcEEEEEecC
Q 014901 310 DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVG-RGRSGIAYQFIER 382 (416)
Q Consensus 310 Dp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId-~gG~~I~yah~d~ 382 (416)
|+...+.++||+. .+|.+|||| ++| +|++.+...
T Consensus 95 d~~~~~~~~~~v~--------------------------------------~~P~~~lid~~~G-~i~~~~~~~ 129 (144)
T 1i5g_A 95 KGMEFLTTGFDVK--------------------------------------SIPTLVGVEADSG-NIITTQART 129 (144)
T ss_dssp HHHHHHHHHTTCC--------------------------------------SSSEEEEEETTTC-CEEESCHHH
T ss_pred HHHHHHHHHcCCC--------------------------------------CCCEEEEEECCCC-cEEeccchh
Confidence 6677787777663 146899999 886 788876443
No 101
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.22 E-value=5.1e-10 Score=99.51 Aligned_cols=136 Identities=11% Similarity=0.165 Sum_probs=84.4
Q ss_pred CCCceechhhccCCCEEEEeecCCCCc-chHHHHHHHHhccchhhhcC--CeEEEEec----CChhhHHhhhcCC----C
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCI-MCRAEAHQLYAKKPIFDALG--IQLFAVLH----EYIESEVKDFWPR----Y 302 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP-~Cn~el~~Ls~~~peL~alG--V~LVaIsp----Es~~~~ik~F~~~----~ 302 (416)
+|++|+++++ +++++||.|+ ..||| .|..++..|.++...+++.| +++|+|+- ++++. +++|.+. .
T Consensus 21 ~G~~v~l~d~-~Gk~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~-l~~y~~~~~~~~ 97 (170)
T 4hde_A 21 DGKPFGTKDL-KGKVWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPEN-LKAFIQKFTEDT 97 (170)
T ss_dssp TSCEEEHHHH-TTSCEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHH-HHHHHTTTCSCC
T ss_pred CCCEEeHHHh-CCCEEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHH-HHHHHHHcCCCC
Confidence 5999999996 7777777765 56887 68888888887777776655 77888884 45554 6777652 2
Q ss_pred CCceeeeccchH-HHHHhCCCcccccccccccccCHHHHHHHHHHHhcCC-ccccCCCCcccceEEEEecCCCcEEEEEe
Q 014901 303 WGGVVVYDQGME-FFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGV-EQNFKGEGEIKGGLFIVGRGRSGIAYQFI 380 (416)
Q Consensus 303 l~f~VLsDp~r~-lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~-~gn~~GD~lqlGGtFVId~gG~~I~yah~ 380 (416)
..+..++++..+ +++.+ +...... .....|...-.+.+||||++| +|+..|.
T Consensus 98 ~~~~~ltg~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~H~~~~~liD~~G-~i~~~~~ 151 (170)
T 4hde_A 98 SNWNLLTGYSLEDITKFS-------------------------KDNFQSLVDKPENGQVIHGTSFYLIDQNG-KVMKKYS 151 (170)
T ss_dssp TTEEEEBCSCHHHHHHHH-------------------------HHHHCCCCBCCTTSCCBCCCEEEEECTTS-CEEEEEE
T ss_pred CCceecCcccHHHHHHHH-------------------------HhcccccccCCCCceEEeeeEEEEEcCCC-eEEEEEC
Confidence 233445554432 22111 0000001 111122222347899999997 8998887
Q ss_pred cCCCCCCCCHHHHHHHHHhhh
Q 014901 381 ERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 381 d~d~gDrad~~eVLaAlk~l~ 401 (416)
... ..+.++|++.+++|.
T Consensus 152 g~~---~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 152 GIS---NTPYEDIIRDMKRLA 169 (170)
T ss_dssp SSS---SCCHHHHHHHHHHHH
T ss_pred CCC---CCCHHHHHHHHHHHh
Confidence 643 345788988888763
No 102
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.19 E-value=1.8e-11 Score=103.98 Aligned_cols=109 Identities=9% Similarity=0.004 Sum_probs=81.6
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-cCCeEEEEecCChhhHHhhhcC-CC-CCceeee-
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEYIESEVKDFWP-RY-WGGVVVY- 309 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a-lGV~LVaIspEs~~~~ik~F~~-~~-l~f~VLs- 309 (416)
+| .++++++ +++++||.|+. .|||.|+.++..|.++..++.+ .++.+|+|+.+.....++.|.+ .. ..++++.
T Consensus 18 ~g-~~~l~~~-~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 94 (146)
T 1o8x_A 18 DG-EVEVKSL-AGKLVFFYFSA-SWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQS 94 (146)
T ss_dssp TE-EEEGGGG-TTCEEEEEEEC-TTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGH
T ss_pred CC-CCcHHHh-CCCEEEEEEEc-cCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchh
Confidence 49 9999996 66777777775 8999999999999999988883 6899999998754444677765 22 3455544
Q ss_pred ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEe-cCCCcEEEEEecCCC
Q 014901 310 DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVG-RGRSGIAYQFIERNF 384 (416)
Q Consensus 310 Dp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId-~gG~~I~yah~d~d~ 384 (416)
|++..+.++||+. .+|.+|||| ++| +|++.+.....
T Consensus 95 d~~~~~~~~~~v~--------------------------------------~~Pt~~lid~~~G-~i~~~~~~~~~ 131 (146)
T 1o8x_A 95 EAVQKLSKHFNVE--------------------------------------SIPTLIGVDADSG-DVVTTRARATL 131 (146)
T ss_dssp HHHHHHHHHTTCC--------------------------------------SSSEEEEEETTTC-CEEESCHHHHH
T ss_pred hHHHHHHHHhCCC--------------------------------------CCCEEEEEECCCC-eEEEecchhHH
Confidence 6677777777663 146899999 886 78887655433
No 103
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.78 E-value=2.8e-12 Score=107.34 Aligned_cols=112 Identities=11% Similarity=-0.030 Sum_probs=80.9
Q ss_pred CCCceechhhccCC-CEEEEeecCCCCcchHHHHHHHHhccchhhh--cCCeEEEEecCChhhHHhhhcC-CCCCc---e
Q 014901 234 KTPPMKALELWRES-PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA--LGIQLFAVLHEYIESEVKDFWP-RYWGG---V 306 (416)
Q Consensus 234 ~G~~VsLsdL~~~~-pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a--lGV~LVaIspEs~~~~ik~F~~-~~l~f---~ 306 (416)
+|++++++++++++ ++||.|+. .|||.|+.++..|.++..++.+ .++.+|+|+.+.....++.|.+ .++++ +
T Consensus 13 ~g~~~~l~~~~~gk~~vll~F~a-~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~ 91 (143)
T 2lus_A 13 NRCEVNANEALKDKDIIGFYFSA-HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIP 91 (143)
Confidence 49999999966777 77776664 9999999999999999988853 5899999987644334666664 33443 4
Q ss_pred eeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCC
Q 014901 307 VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFG 385 (416)
Q Consensus 307 VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~g 385 (416)
+..|+...++++||+. ..|.+||||++| +|++.+...+..
T Consensus 92 ~~~~~~~~~~~~~~v~--------------------------------------~~P~~~lid~~G-~i~~~~~~~~~~ 131 (143)
T 2lus_A 92 YRSGPASNVTAKYGIT--------------------------------------GIPALVIVKKDG-TLISMNGRGEVQ 131 (143)
Confidence 5556666676666552 136789999886 788886555544
No 104
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.16 E-value=1.4e-11 Score=108.30 Aligned_cols=105 Identities=9% Similarity=0.005 Sum_probs=77.9
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-cCCeEEEEecCChhhHHhhhcC-C-CCCceeeec
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEYIESEVKDFWP-R-YWGGVVVYD 310 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a-lGV~LVaIspEs~~~~ik~F~~-~-~l~f~VLsD 310 (416)
+| .++++++ +++++||.|+ ..|||.|+.++..|.++..++.+ .++.+|+|+.+.....++.|.+ . ...++++.|
T Consensus 38 ~g-~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3s9f_A 38 AD-TADMDSL-SGKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANR 114 (165)
T ss_dssp TE-EECSGGG-TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCH
T ss_pred CC-cccHHHc-CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCch
Confidence 48 9999996 6677777777 89999999999999999999986 7999999998766545677765 2 223444433
Q ss_pred cc-hHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecC-CCcEEEEEe
Q 014901 311 QG-MEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRG-RSGIAYQFI 380 (416)
Q Consensus 311 p~-r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~g-G~~I~yah~ 380 (416)
.. ..+.++||+. -+|.+||||++ | +|++.+.
T Consensus 115 ~~~~~l~~~~~v~--------------------------------------~~Pt~~lid~~~G-~iv~~~~ 147 (165)
T 3s9f_A 115 NIVEALTKKYSVE--------------------------------------SIPTLIGLNADTG-DTVTTRA 147 (165)
T ss_dssp HHHHHHHHHTTCC--------------------------------------SSSEEEEEETTTC-CEEESCH
T ss_pred hHHHHHHHHcCCC--------------------------------------CCCEEEEEeCCCC-EEEeccc
Confidence 33 5666666552 14789999997 7 7888654
No 105
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.16 E-value=7.3e-11 Score=99.25 Aligned_cols=105 Identities=14% Similarity=0.040 Sum_probs=77.7
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhh-hcCCeEEEEecCChhhHHhhhcC-CC-CCceeee-
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD-ALGIQLFAVLHEYIESEVKDFWP-RY-WGGVVVY- 309 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~-alGV~LVaIspEs~~~~ik~F~~-~~-l~f~VLs- 309 (416)
+| .++++++ +++++||.|+ ..|||.|+.++..|.++..++. +.++.+|+|+.+.....++.|.+ .. ..++++.
T Consensus 18 ~g-~~~l~~~-~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~ 94 (144)
T 1o73_A 18 SG-EVSLGSL-VGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQR 94 (144)
T ss_dssp TS-CBCSGGG-TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCH
T ss_pred CC-cCcHHHh-CCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccch
Confidence 59 9999996 6677777776 6899999999999999988887 46899999998765444666664 22 2344333
Q ss_pred ccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEe-cCCCcEEEEEe
Q 014901 310 DQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVG-RGRSGIAYQFI 380 (416)
Q Consensus 310 Dp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId-~gG~~I~yah~ 380 (416)
|+...+.++||+. ..|.+|||| ++| +|++.+.
T Consensus 95 ~~~~~~~~~~~v~--------------------------------------~~Pt~~lid~~~G-~i~~~~~ 127 (144)
T 1o73_A 95 STVSELGKTFGVE--------------------------------------SIPTLITINADTG-AIIGTQA 127 (144)
T ss_dssp HHHHHHHHHHTCC--------------------------------------SSSEEEEEETTTC-CEEESCH
T ss_pred hHHHHHHHHcCCC--------------------------------------CCCEEEEEECCCC-eEEecch
Confidence 5566777776653 146899999 786 7887654
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.66 E-value=1.8e-07 Score=87.40 Aligned_cols=129 Identities=13% Similarity=0.018 Sum_probs=94.5
Q ss_pred Cceechhhc-cCCCEEEEeecCCCCcchHH-HHHHHHhccchh-hhcCC-eEEEEecCChhhHHhhhcC-C----CCCce
Q 014901 236 PPMKALELW-RESPAVLLCIRRPGCIMCRA-EAHQLYAKKPIF-DALGI-QLFAVLHEYIESEVKDFWP-R----YWGGV 306 (416)
Q Consensus 236 ~~VsLsdL~-~~~pvVLvFyRg~gCP~Cn~-el~~Ls~~~peL-~alGV-~LVaIspEs~~~~ik~F~~-~----~l~f~ 306 (416)
+++++++++ ++++|||+++.+.+.|-|.. ++..+.+.++++ ++.|+ .+++|+-.++- ..+.|.+ . ...+.
T Consensus 58 ~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kGvd~I~ciSVND~F-Vm~AW~k~~~~~~~~~i~ 136 (199)
T 4h86_A 58 QTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPF-ANQAWAKSLGVKDTTHIK 136 (199)
T ss_dssp EEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSCCCEEEEEESSCHH-HHHHHHHHTTCCCCSSEE
T ss_pred eeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcCCcEEEEEEcCCHH-HHHHHHHHhccccccccc
Confidence 467888877 57789999999999999986 688998888865 88998 57778877764 3566653 2 34678
Q ss_pred eeeccchHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCC
Q 014901 307 VVYDQGMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD 386 (416)
Q Consensus 307 VLsDp~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gD 386 (416)
+++|++.++.++||+... . ++ |...-..-++||+ +| +|.|.+++++.++
T Consensus 137 ~laD~~~eftkalGl~~~--~----~~-----------------------gg~RS~Rya~IVd-DG-vV~~~~vE~~pg~ 185 (199)
T 4h86_A 137 FASDPGCAFTKSIGFELA--V----GD-----------------------GVYWSGRWAMVVE-NG-IVTYAAKETNPGT 185 (199)
T ss_dssp EEECGGGHHHHHTTCEEE--E----ET-----------------------TEEEECSEEEEEE-TT-EEEEEEECSSTTT
T ss_pred ccCCcchHHHHhcCceee--c----CC-----------------------CcceeeEEEEEEE-CC-EEEEEEEeCCCCC
Confidence 999999999999998520 0 00 0001124689998 65 8999999998765
Q ss_pred C---CCHHHHHHH
Q 014901 387 W---APLAEVIEI 396 (416)
Q Consensus 387 r---ad~~eVLaA 396 (416)
. ...+.||+.
T Consensus 186 ~~~vS~ae~vL~~ 198 (199)
T 4h86_A 186 DVTVSSVESVLAH 198 (199)
T ss_dssp CCSTTSHHHHHTT
T ss_pred CCcccCHHHHHhc
Confidence 4 456777754
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.35 E-value=2.5e-06 Score=70.34 Aligned_cols=96 Identities=9% Similarity=0.108 Sum_probs=68.0
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCCCc
Q 014901 244 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGK 323 (416)
Q Consensus 244 ~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl~r 323 (416)
.+++++||.|+ ..|||.|+.....|.++..++. .++.++.|..+ .|.+..+.+.||+.
T Consensus 24 ~~~k~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~-------------------~d~~~~~~~~~~v~- 81 (126)
T 2l57_A 24 KEGIPTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE-------------------EEKNIDLAYKYDAN- 81 (126)
T ss_dssp CSSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT-------------------SSHHHHHHHHTTCC-
T ss_pred hCCCcEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC-------------------CCchHHHHHHcCCc-
Confidence 34566666665 7899999999999988777765 57888888743 23445566666653
Q ss_pred ccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhh
Q 014901 324 LLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQ 403 (416)
Q Consensus 324 ~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~ 403 (416)
-.|.+++++++| ++.+.+.+ ..+.+++.+.++.+...
T Consensus 82 -------------------------------------~~Pt~~~~~~~G-~~~~~~~G-----~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 82 -------------------------------------IVPTTVFLDKEG-NKFYVHQG-----LMRKNNIETILNSLGVK 118 (126)
T ss_dssp -------------------------------------SSSEEEEECTTC-CEEEEEES-----CCCHHHHHHHHHHHCCC
T ss_pred -------------------------------------ceeEEEEECCCC-CEEEEecC-----CCCHHHHHHHHHHHhcc
Confidence 147899999886 78887765 34678888888776544
Q ss_pred h
Q 014901 404 Q 404 (416)
Q Consensus 404 ~ 404 (416)
.
T Consensus 119 ~ 119 (126)
T 2l57_A 119 E 119 (126)
T ss_dssp C
T ss_pred c
Confidence 4
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.20 E-value=1.8e-06 Score=74.92 Aligned_cols=113 Identities=9% Similarity=-0.016 Sum_probs=72.3
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHh---ccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeecc
Q 014901 235 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYA---KKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 235 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~---~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp 311 (416)
|+.+.+.. .+++|+||.|+...|||.|+.+...|.+ ..... ..++.+|.|..+... .++++ +.|.
T Consensus 37 ~~~~~~a~-~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~-~~~~~~v~vd~~~~~---------~~~~~-~~~~ 104 (154)
T 2ju5_A 37 AEALEHSK-QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA-GVHLHMVEVDFPQKN---------HQPEE-QRQK 104 (154)
T ss_dssp HHHHHHHH-HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH-HHHCEEEEEECCSSC---------CCCHH-HHHH
T ss_pred HHHHHHHH-hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh-cCcEEEEEecCcccc---------CCChh-hHhh
Confidence 45555665 3678988888888999999999998843 22222 234555555533211 23333 2455
Q ss_pred chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHH
Q 014901 312 GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLA 391 (416)
Q Consensus 312 ~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~ 391 (416)
+..+.+.||+. -.|.+||+|++| ++++.+ +.. ..+.+
T Consensus 105 ~~~l~~~~~v~--------------------------------------~~Pt~~~~d~~G-~~~~~~-G~~---~~~~~ 141 (154)
T 2ju5_A 105 NQELKAQYKVT--------------------------------------GFPELVFIDAEG-KQLARM-GFE---PGGGA 141 (154)
T ss_dssp HHHHHHHTTCC--------------------------------------SSSEEEEECTTC-CEEEEE-CCC---TTCHH
T ss_pred HHHHHHHcCCC--------------------------------------CCCEEEEEcCCC-CEEEEe-cCC---CCCHH
Confidence 55555555442 157899999997 788877 432 34788
Q ss_pred HHHHHHHhhhh
Q 014901 392 EVIEICTQLQD 402 (416)
Q Consensus 392 eVLaAlk~l~~ 402 (416)
++++.++.+.+
T Consensus 142 ~l~~~l~~~l~ 152 (154)
T 2ju5_A 142 AYVSKVKSALK 152 (154)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 88888877643
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.94 E-value=1.5e-05 Score=67.06 Aligned_cols=103 Identities=10% Similarity=0.028 Sum_probs=64.0
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 237 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 237 ~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~L---s~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
...+.++ +++++||.|+ ..||+.|+.....+ .++..++. ++.++.|..+.. .|...
T Consensus 23 ~~~l~~~-~~k~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~-----------------~~~~~ 81 (134)
T 2fwh_A 23 NQALVEA-KGKPVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAN-----------------DAQDV 81 (134)
T ss_dssp HHHHHHH-TTSCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTC-----------------CHHHH
T ss_pred HHHHHHh-cCCcEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCC-----------------cchHH
Confidence 3445553 4678888887 69999999987665 44444443 577877765421 13445
Q ss_pred HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEE--EEEecCCCCCCCCHH
Q 014901 314 EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIA--YQFIERNFGDWAPLA 391 (416)
Q Consensus 314 ~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~--yah~d~d~gDrad~~ 391 (416)
.+.+.||+. -.|.+|++|++| +++ +.+. ...+.+
T Consensus 82 ~l~~~~~v~--------------------------------------~~Pt~~~~d~~G-~~v~~~~~~-----G~~~~~ 117 (134)
T 2fwh_A 82 ALLKHLNVL--------------------------------------GLPTILFFDGQG-QEHPQARVT-----GFMDAE 117 (134)
T ss_dssp HHHHHTTCC--------------------------------------SSSEEEEECTTS-CBCGGGCBC-----SCCCHH
T ss_pred HHHHHcCCC--------------------------------------CCCEEEEECCCC-CEeeeeeee-----eccCHH
Confidence 566655552 147899999986 565 3333 345678
Q ss_pred HHHHHHHhhhhhh
Q 014901 392 EVIEICTQLQDQQ 404 (416)
Q Consensus 392 eVLaAlk~l~~~~ 404 (416)
++.+.++.+.+.+
T Consensus 118 ~l~~~l~~~~~~~ 130 (134)
T 2fwh_A 118 TFSAHLRDRQPHH 130 (134)
T ss_dssp HHHHHHHHC----
T ss_pred HHHHHHHhcCccc
Confidence 8888888876654
No 110
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.87 E-value=0.00016 Score=57.98 Aligned_cols=86 Identities=13% Similarity=0.126 Sum_probs=58.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCCCccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGKLL 325 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl~r~~ 325 (416)
++++||.|+. .|||.|+.....|.++..++. ++.++.|..+. .+..+.+.||+.
T Consensus 24 ~~~vlv~f~a-~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~--------------------~~~~~~~~~~v~--- 77 (111)
T 2pu9_C 24 DKPVVLDMFT-QWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ--------------------ENKTLAKELGIR--- 77 (111)
T ss_dssp TSCEEEEEEC-TTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------------------TTHHHHHHHCCS---
T ss_pred CCEEEEEEEC-CcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc--------------------chHHHHHHcCCC---
Confidence 5677777766 899999999999988766664 47777766431 234566666653
Q ss_pred ccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 326 KDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 326 r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
-.| +|++.++| ++.+.+.+.+ .+++.+.++.+
T Consensus 78 -----------------------------------~~P-t~~~~~~G-~~~~~~~G~~------~~~l~~~l~~~ 109 (111)
T 2pu9_C 78 -----------------------------------VVP-TFKILKEN-SVVGEVTGAK------YDKLLEAIQAA 109 (111)
T ss_dssp -----------------------------------BSS-EEEEESSS-SEEEEEESSC------HHHHHHHHHHH
T ss_pred -----------------------------------eee-EEEEEeCC-cEEEEEcCCC------HHHHHHHHHHh
Confidence 135 47788886 7877776542 56777777654
No 111
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=5.7e-05 Score=62.13 Aligned_cols=94 Identities=13% Similarity=0.217 Sum_probs=58.2
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHH---hccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCC
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLY---AKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGG 321 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls---~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl 321 (416)
+++++||.|+ ..|||.|+.....+. .....+ ..++.++.|..+. |....+.+.||+
T Consensus 26 ~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~~~vd~~~-------------------~~~~~~~~~~~v 84 (130)
T 2kuc_A 26 EDKLLFVDCF-TTWCGPCKRLSKVVFKDSLVADYF-NRHFVNLKMDMEK-------------------GEGVELRKKYGV 84 (130)
T ss_dssp HSSCEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHH-HHHSEEEEECSSS-------------------TTHHHHHHHTTC
T ss_pred cCCeEEEEEE-CCCCccHHHHHHHhcCcHHHHHHH-hcCeEEEEEecCC-------------------cchHHHHHHcCC
Confidence 5667777776 799999999888773 221111 1123333332221 244566666655
Q ss_pred CcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 322 GKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 322 ~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
. ..|.++++|++| ++.+.+.+. .+.+++.+.++.+.
T Consensus 85 ~--------------------------------------~~Pt~~~~d~~G-~~~~~~~G~-----~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 85 H--------------------------------------AYPTLLFINSSG-EVVYRLVGA-----EDAPELLKKVKLGV 120 (130)
T ss_dssp C--------------------------------------SSCEEEEECTTS-CEEEEEESC-----CCHHHHHHHHHHHH
T ss_pred C--------------------------------------CCCEEEEECCCC-cEEEEecCC-----CCHHHHHHHHHHHH
Confidence 3 147899999886 788877653 35788888887765
Q ss_pred hh
Q 014901 402 DQ 403 (416)
Q Consensus 402 ~~ 403 (416)
..
T Consensus 121 ~~ 122 (130)
T 2kuc_A 121 ES 122 (130)
T ss_dssp SC
T ss_pred Hh
Confidence 43
No 112
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.83 E-value=5.9e-05 Score=62.57 Aligned_cols=101 Identities=13% Similarity=0.245 Sum_probs=69.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHH--hccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCCC
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLY--AKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls--~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl~ 322 (416)
.++++||.| -..||+.|+.....|. ++..++.. ++.++.|..+. .|....+.+.||+.
T Consensus 28 ~~k~vlv~f-~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~------------------~~~~~~l~~~~~v~ 87 (133)
T 3fk8_A 28 THKPTLLVF-GANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN------------------FDRNLELSQAYGDP 87 (133)
T ss_dssp HTCCEEEEE-ECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT------------------TTSSHHHHHHTTCG
T ss_pred cCCcEEEEE-cCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc------------------ccchHHHHHHhCCc
Confidence 355655555 5889999999999988 66666644 57888776532 24566777777763
Q ss_pred cccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCC--CCCHHHHHHHHHhh
Q 014901 323 KLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGD--WAPLAEVIEICTQL 400 (416)
Q Consensus 323 r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gD--rad~~eVLaAlk~l 400 (416)
. + ...|.++++|++| ++++.+.+..... ..+.+++.+.++.+
T Consensus 88 ~-------------~----------------------~~~Pt~~~~d~~G-~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 88 I-------------Q----------------------DGIPAVVVVNSDG-KVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp G-------------G----------------------GCSSEEEEECTTS-CEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred c-------------C----------------------CccceEEEECCCC-CEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 0 0 1257899999996 8998887744432 35677777777665
Q ss_pred h
Q 014901 401 Q 401 (416)
Q Consensus 401 ~ 401 (416)
.
T Consensus 132 ~ 132 (133)
T 3fk8_A 132 T 132 (133)
T ss_dssp H
T ss_pred c
Confidence 3
No 113
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.78 E-value=0.00023 Score=58.17 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=31.7
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
+++++||.|+ ..|||.|+.....|.++..++. ++.++.|-.
T Consensus 36 ~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~ 76 (124)
T 1faa_A 36 GDKPVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDC 76 (124)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEEC
T ss_pred CCCEEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEec
Confidence 4567877777 7999999999999988766654 577776654
No 114
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.74 E-value=0.00021 Score=55.43 Aligned_cols=46 Identities=7% Similarity=-0.009 Sum_probs=31.4
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
.++.+.++.+|++|...|||.|+.....|.++..++.. +.++.|..
T Consensus 10 ~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~ 55 (104)
T 2e0q_A 10 DSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNS 55 (104)
T ss_dssp HHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEET
T ss_pred HHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEEC
Confidence 33334444444445589999999999998887766644 77777764
No 115
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.67 E-value=9.6e-05 Score=61.77 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=60.0
Q ss_pred cCCCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeecc
Q 014901 232 KTKTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 232 ~~~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp 311 (416)
+..|..+.+.++ +++++||.|| ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.|+
T Consensus 38 ~~~~~~~~l~~~-~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 114 (141)
T 3hxs_A 38 DYENHSKEWKYL-GDKPAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKEPELARDFGIQSIPTIWFVPM 114 (141)
T ss_dssp CCSSCCCCCCCC-CSSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEECS
T ss_pred ccccchhHHHHh-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCCHHHHHHcCCCCcCEEEEEeC
Confidence 445778888764 6778888777 58999999999999888777764 48888888766544345554467777788887
Q ss_pred chHH
Q 014901 312 GMEF 315 (416)
Q Consensus 312 ~r~l 315 (416)
+.++
T Consensus 115 ~g~~ 118 (141)
T 3hxs_A 115 KGEP 118 (141)
T ss_dssp SSCC
T ss_pred CCCE
Confidence 7654
No 116
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.61 E-value=0.00057 Score=54.32 Aligned_cols=88 Identities=10% Similarity=0.085 Sum_probs=58.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCCCccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGGGKLL 325 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl~r~~ 325 (416)
++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+ .+..+.+.||+.
T Consensus 25 ~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~---------------------~~~~~~~~~~v~--- 78 (115)
T 1thx_A 25 EQPVLVYFW-ASWCGPCQLMSPLINLAANTYSD-RLKVVKLEID---------------------PNPTTVKKYKVE--- 78 (115)
T ss_dssp SSCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEEST---------------------TCHHHHHHTTCC---
T ss_pred CceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcC---------------------CCHHHHHHcCCC---
Confidence 456555555 68999999999999887766654 2777776643 233456666553
Q ss_pred ccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhh
Q 014901 326 KDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQ 401 (416)
Q Consensus 326 r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~ 401 (416)
..|..+++ ++| ++.+.+.+. .+.+++.+.++.+.
T Consensus 79 -----------------------------------~~Pt~~~~-~~G-~~~~~~~g~-----~~~~~l~~~l~~~l 112 (115)
T 1thx_A 79 -----------------------------------GVPALRLV-KGE-QILDSTEGV-----ISKDKLLSFLDTHL 112 (115)
T ss_dssp -----------------------------------SSSEEEEE-ETT-EEEEEEESC-----CCHHHHHHHHHHHH
T ss_pred -----------------------------------ceeEEEEE-cCC-EEEEEecCC-----CCHHHHHHHHHHHh
Confidence 13677777 665 777766543 45677877777654
No 117
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.60 E-value=0.00044 Score=57.43 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=28.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..
T Consensus 38 ~k~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~ 77 (124)
T 1xfl_A 38 KTLVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDT 77 (124)
T ss_dssp TCEEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEET
T ss_pred CCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEEC
Confidence 455555555 5999999999999988766664 566666653
No 118
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.59 E-value=0.00028 Score=57.01 Aligned_cols=46 Identities=11% Similarity=-0.030 Sum_probs=33.6
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
.+...++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..
T Consensus 12 ~~~~~~~~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~ 57 (112)
T 2voc_A 12 SAETSEGVVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDV 57 (112)
T ss_dssp HHHHSSSEEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEET
T ss_pred HHHhCCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEEC
Confidence 33335556666665 59999999999999888777754 577777764
No 119
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.53 E-value=0.00023 Score=59.91 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=62.8
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhC
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALG 320 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALG 320 (416)
.+.++. ++||.|+ ..||+.|+.....|.++..++. +.++.|..+.... ....|....+.+.||
T Consensus 27 ~~~~~~-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~------------~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 27 RQLLQG-DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIG------------ERELSAARLEMNKAG 89 (135)
T ss_dssp HHHHTS-SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCC------------HHHHHHHHHHHHHHT
T ss_pred HHHhCC-cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchh------------hhhhhhhHHHHHHcC
Confidence 344555 7766665 7899999999999888776664 7888887544321 112233445555555
Q ss_pred CCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhh
Q 014901 321 GGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQL 400 (416)
Q Consensus 321 l~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l 400 (416)
+. ..| +|++..+| ++...+.+. .+.+.+.+.++.+
T Consensus 90 v~--------------------------------------~~P-t~~~~~~G-~~v~~~~G~-----~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 VE--------------------------------------GTP-TLVFYKEG-RIVDKLVGA-----TPWSLKVEKAREI 124 (135)
T ss_dssp CC--------------------------------------SSS-EEEEEETT-EEEEEEESC-----CCHHHHHHHHHHH
T ss_pred Cc--------------------------------------eeC-eEEEEcCC-EEEEEEeCC-----CCHHHHHHHHHHH
Confidence 42 146 56665575 788877764 4456666677776
Q ss_pred hhhhc
Q 014901 401 QDQQR 405 (416)
Q Consensus 401 ~~~~~ 405 (416)
.+.+.
T Consensus 125 ~~~~~ 129 (135)
T 3emx_A 125 YGGEG 129 (135)
T ss_dssp C----
T ss_pred hCCCc
Confidence 65543
No 120
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.47 E-value=0.001 Score=55.35 Aligned_cols=41 Identities=7% Similarity=-0.047 Sum_probs=32.2
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
+++++||.|+. .||+.|+.....|.++..++. ++.++.|..
T Consensus 45 ~~k~vvv~f~a-~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~ 85 (139)
T 3d22_A 45 DGKIVLANFSA-RWCGPSRQIAPYYIELSENYP--SLMFLVIDV 85 (139)
T ss_dssp HTCCEEEEEEC-TTCHHHHHHHHHHHHHHHHCT--TSEEEEEET
T ss_pred cCCEEEEEEEC-CCCHHHHHHHHHHHHHHHHCC--CCEEEEEeC
Confidence 46777777775 899999999999988776663 678877764
No 121
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.40 E-value=0.00024 Score=55.68 Aligned_cols=74 Identities=9% Similarity=0.057 Sum_probs=49.9
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
+.+..+++++||.|+ ..|||.|+.....|.++..++... +.++.|..+......+.|.-..+|.-++.+.++.+
T Consensus 13 ~~~~~~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~ 86 (106)
T 3die_A 13 FDSKVESGVQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPV 86 (106)
T ss_dssp HHHHSCSSEEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEE
T ss_pred HHHHhcCCcEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEE
Confidence 344446666666666 899999999999998888777643 88888887655443444544566655555544443
No 122
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.39 E-value=4.8e-05 Score=62.69 Aligned_cols=76 Identities=9% Similarity=0.012 Sum_probs=52.4
Q ss_pred CCCceechh-hccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeecc
Q 014901 234 KTPPMKALE-LWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 234 ~G~~VsLsd-L~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp 311 (416)
+|....+.+ +.+.++.||++|-..||+.|+.....|.++..++ .++.++.|..+......+.|.-..+|.-++.|.
T Consensus 9 ~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~ 85 (118)
T 2f51_A 9 NGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDKNGNAADAYGVSSIPALFFVKK 85 (118)
T ss_dssp CSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTCHHHHHHTTCCSSSEEEEEEE
T ss_pred cCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCCCHHHHHhcCCCCCCEEEEEeC
Confidence 366666763 4443434444455799999999999998877766 578999998765544345554466777777776
No 123
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.35 E-value=0.00027 Score=58.12 Aligned_cols=75 Identities=9% Similarity=0.042 Sum_probs=50.4
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
+.++++.++.+|++|-..|||.|+.....|.++..++...|+.++.|..+......+.|.-..+|.-++.+.++.
T Consensus 26 f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~ 100 (121)
T 2j23_A 26 FKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQK 100 (121)
T ss_dssp HHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEE
T ss_pred HHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeE
Confidence 344455544444444578999999999999998888887789999998766543344554356665555554433
No 124
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.21 E-value=0.00052 Score=53.57 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=44.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++.+.++
T Consensus 19 ~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~ 83 (104)
T 2vim_A 19 GRLIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGK 83 (104)
T ss_dssp TSCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred CCeEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCccccEEEEEeCCc
Confidence 456666555 8999999999999988776664 7999999877654434445435666655554443
No 125
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=97.12 E-value=0.00025 Score=62.28 Aligned_cols=70 Identities=19% Similarity=0.244 Sum_probs=47.9
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhh-HHhhhcC--CCCCceeeeccchHH
Q 014901 244 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIES-EVKDFWP--RYWGGVVVYDQGMEF 315 (416)
Q Consensus 244 ~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~-~ik~F~~--~~l~f~VLsDp~r~l 315 (416)
.+++|+||.|+ ..|||.|+.....|.++. +....++.++.|..+.... ....|.- ..+|.-++.|++.++
T Consensus 44 ~~~k~vlv~F~-a~WC~~C~~~~p~l~~~~-~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 44 ASGLPLMVIIH-KSWCGACKALKPKFAEST-EISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHTCCEEEEEE-CTTCHHHHHHHHHHHTCH-HHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred hcCCeEEEEEE-CCCCHHHHHHHHHHHHHH-HHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 35678888777 699999999999998854 3444467888887654332 1234433 447777888876544
No 126
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.09 E-value=0.001 Score=52.76 Aligned_cols=58 Identities=10% Similarity=0.037 Sum_probs=41.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 305 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f 305 (416)
++++||.|+. .|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.
T Consensus 24 ~~~~vv~f~~-~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt 81 (112)
T 1ep7_A 24 HKPIVVDFTA-TWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITAMPT 81 (112)
T ss_dssp TCCEEEEEEC-TTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCBSSE
T ss_pred CCeEEEEEEC-CCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCcccE
Confidence 5677777664 8999999999999887777754 68999988765443344454345554
No 127
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.08 E-value=0.0042 Score=52.27 Aligned_cols=40 Identities=15% Similarity=0.319 Sum_probs=29.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
++++||.|| ..||+.|+.....|.++..++.. .+.++.|-
T Consensus 24 ~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd 63 (140)
T 3hz4_A 24 KKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRIN 63 (140)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEE
T ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEE
Confidence 456666655 78999999999999887777654 36666665
No 128
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.03 E-value=0.00083 Score=52.98 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=47.3
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc--CCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL--GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al--GV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
+.+++.++++||.|+ ..||+.|+.....|.++..++... ++.++.|-.+......+.|.-..+|.-++...++.
T Consensus 15 ~~~~~~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 90 (111)
T 3uvt_A 15 FDDTIAEGITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKK 90 (111)
T ss_dssp HHHHHHSSEEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred HHHHhcCCcEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcE
Confidence 444555666655555 689999999999998887766543 67777777665443344444355665555544443
No 129
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.03 E-value=0.0012 Score=52.82 Aligned_cols=62 Identities=11% Similarity=0.093 Sum_probs=42.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 310 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsD 310 (416)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++..
T Consensus 28 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 89 (118)
T 2vm1_A 28 GKLVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEAMPTFLFIK 89 (118)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCSBSEEEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCcCcEEEEEe
Confidence 567777776 5899999999999988776665 7889888876544333444434555544443
No 130
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.01 E-value=0.00098 Score=53.72 Aligned_cols=77 Identities=8% Similarity=0.059 Sum_probs=51.9
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 237 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 237 ~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
.-.+.+..++++.||++|-..||+.|+.....|.++..++. ++.++.|-.+......+.|.-..+|.-++.+.++.+
T Consensus 14 ~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 90 (109)
T 3f3q_A 14 ASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEV 90 (109)
T ss_dssp HHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEE
Confidence 34456666655555666667899999999999988777664 488888877655443444544567766666655443
No 131
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.97 E-value=0.002 Score=53.40 Aligned_cols=73 Identities=14% Similarity=0.119 Sum_probs=46.7
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC--CeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG--IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alG--V~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
.+++.++..||++|-..||+.|+.....|.++..++...+ +.++.|-.+......+.|.-..+|.-++.+.++
T Consensus 28 ~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~ 102 (140)
T 2dj1_A 28 DNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQ 102 (140)
T ss_dssp HHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred HHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEECCc
Confidence 3444555555666667999999999999998888887764 666666655433323444335566555554443
No 132
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.96 E-value=0.0016 Score=52.76 Aligned_cols=57 Identities=14% Similarity=0.077 Sum_probs=40.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 305 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f 305 (416)
++++||.|+ ..|||.|+.....|.++..++.. +.++.|..+......+.|.-..+|.
T Consensus 34 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~~Pt 90 (122)
T 2vlu_A 34 KKLVVIDFT-ASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEAMPT 90 (122)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCcccE
Confidence 567777777 78999999999999887766653 8888888765443344444345554
No 133
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.0019 Score=51.46 Aligned_cols=65 Identities=9% Similarity=-0.026 Sum_probs=42.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeecc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp 311 (416)
++++||.|+ ..|||.|+.....|.++..+++..++.++.|..+......+.|.-..+|.-++...
T Consensus 21 ~~~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 85 (112)
T 3d6i_A 21 DKLIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIHK 85 (112)
T ss_dssp TCCEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred CCEEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEEC
Confidence 456655555 68999999999999888777766679999998765443344454355665444433
No 134
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.90 E-value=0.0015 Score=51.15 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=42.7
Q ss_pred hhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeec
Q 014901 242 ELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 310 (416)
Q Consensus 242 dL~~-~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsD 310 (416)
++.+ ++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++..
T Consensus 12 ~~~~~~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 79 (105)
T 1nsw_A 12 QAIQGDGPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDENPETTSQFGIMSIPTLILFK 79 (105)
T ss_dssp HHHSSSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred HHHhCCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCCHHHHHHcCCccccEEEEEe
Confidence 4444 455555555 78999999999999887766654 3788888765543323444334555544443
No 135
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.89 E-value=0.0014 Score=52.69 Aligned_cols=67 Identities=9% Similarity=-0.023 Sum_probs=44.1
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
+.++++.++.+|++|-..||+.|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++
T Consensus 19 f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 19 FDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDEVSEVTEKENITSMPTFKV 85 (112)
T ss_dssp HHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred HHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 44555555555555558899999999999988776664 68999998765443344444345554333
No 136
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.88 E-value=0.0023 Score=49.83 Aligned_cols=63 Identities=14% Similarity=0.201 Sum_probs=41.8
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
.++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 3567767666 58999999999999887766654 378888876654433344433455553433
No 137
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.88 E-value=0.0022 Score=52.28 Aligned_cols=62 Identities=13% Similarity=0.039 Sum_probs=42.0
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.
T Consensus 31 ~k~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 92 (119)
T 1w4v_A 31 ETPVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDHTDLAIEYEVSAVPTVLAM 92 (119)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTTHHHHHHTTCCSSSEEEEE
T ss_pred CCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcccEEEEE
Confidence 456666666 88999999999999887776654 588888887654433344433455544444
No 138
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=96.84 E-value=0.00043 Score=61.46 Aligned_cols=99 Identities=24% Similarity=0.454 Sum_probs=81.1
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhHH--hhhHH------------------HHhhhccchh
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQQ--QKDAL------------------EIRSYLHDRA 64 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~~--~~~~~------------------~~r~~l~~~~ 64 (416)
++.+|+-.-=|......|.+.||| ..++..|+.+|+..|++|.. ||--| .+..||.+=|
T Consensus 12 ~V~~WL~~lgL~~Y~~~F~~~g~d-~~~l~~lt~~DL~~lGIt~~gHrkkil~ai~~L~~~~~~~~~~p~~v~~WL~~ig 90 (149)
T 3sei_A 12 AVSQWLTAFQLQLYAPNFISAGYD-LPTISRMTPEDLTAIGVTKPGHRKKIAAEISGLSIPDWLPEHKPANLAVWLSMIG 90 (149)
T ss_dssp HHHHHHHTTTCGGGHHHHHHTTCC-HHHHTTCCHHHHHHTTCCSHHHHHHHHHHHHTCCCCCCSCSSCCSCHHHHHHHTT
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCC-HHHHccCCHHHHHHcCCCCHHHHHHHHHHHHHHHhccccCCCCcccHHHHHHHcC
Confidence 455666555566777899999999 99999999999999999852 33221 3667999999
Q ss_pred hhhhhHHHHHcCCC-hHHHhccCcccchhhcccc-cccccccc
Q 014901 65 LMQYADIFEASGKS-LPELLNLSTGDLSSQFGMK-RGHMARFK 105 (416)
Q Consensus 65 l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~-~~h~~~f~ 105 (416)
|=||.+.+.+.|.+ +..|..++..|| .+-|+. -||-.|-+
T Consensus 91 L~qY~~~F~~~g~d~~~~l~~lt~~dL-~~lGI~~~gHr~kIl 132 (149)
T 3sei_A 91 LAQYYKVLVDNGYENIDFITDITWEDL-QEIGITKLGHQKKLM 132 (149)
T ss_dssp CGGGHHHHHHTTCCSHHHHTTCCHHHH-HHHTCCCHHHHHHHH
T ss_pred chhhHHHHHHCCCchHHHHhhCCHHHH-HHCCCCCHHHHHHHH
Confidence 99999999999998 999999999999 789986 68987755
No 139
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.84 E-value=0.0017 Score=50.79 Aligned_cols=67 Identities=7% Similarity=0.065 Sum_probs=45.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
+++++||.|+ ..|||.|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++.+.++.
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 85 (105)
T 3m9j_A 19 GDKLVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQK 85 (105)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEE
T ss_pred CCCeEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeE
Confidence 3556666665 5899999999999988777664 48888888765544344454356665555555443
No 140
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.81 E-value=0.0023 Score=51.74 Aligned_cols=70 Identities=11% Similarity=0.038 Sum_probs=49.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFK 317 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYk 317 (416)
++++||.|+ ..||+.|+.....|.++..++.. ++.++.|-.+......+.|.-..+|.-++.|.+..+.+
T Consensus 21 ~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~ 90 (122)
T 3aps_A 21 KTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKS 90 (122)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTE
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccce
Confidence 345555554 68999999999999887777754 68888888765544344554466777777777776443
No 141
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.80 E-value=0.0017 Score=50.69 Aligned_cols=67 Identities=10% Similarity=0.067 Sum_probs=43.4
Q ss_pred hhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeec
Q 014901 242 ELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 310 (416)
Q Consensus 242 dL~~-~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsD 310 (416)
++.+ ++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++..
T Consensus 13 ~~~~~~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 13 ETLGQHPLVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp HHHHHCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred HHhcCCCeEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 3344 455555555 88999999999999887776654 4888888866544334445434555554443
No 142
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.80 E-value=0.0025 Score=50.70 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=40.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCcee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVV 307 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~V 307 (416)
++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-+
T Consensus 23 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 23 DKPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 456655555 68999999999999887777654 4888888876544334444334555433
No 143
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=96.80 E-value=0.0022 Score=50.13 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=41.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.
T Consensus 20 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 20 SGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp SSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 455555555 79999999999999887777754 688888886654433444443455544444
No 144
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.78 E-value=0.0024 Score=52.03 Aligned_cols=64 Identities=6% Similarity=0.020 Sum_probs=43.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
++++||.|+ ..||+.|+.....|.++..++.. +.++.|-.+......+.|.-..+|.-++...+
T Consensus 31 ~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 94 (116)
T 3qfa_C 31 DKLVVVDFS-ATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKSMPTFQFFKKG 94 (116)
T ss_dssp TSCEEEEEE-CTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCSSSEEEEESSS
T ss_pred CCEEEEEEE-CCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCccccEEEEEeCC
Confidence 455555555 67999999999999888777754 88888887655443444543556654444433
No 145
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.77 E-value=0.0025 Score=49.73 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=40.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
++++||.|+ ..|||.|+.....|.++..++. .++.++.|..+......+.|.-..+|.-++.
T Consensus 20 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 20 GKLVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp TSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCEEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 445555555 5899999999999988776665 4688888887654433444443455543333
No 146
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.76 E-value=0.0014 Score=53.52 Aligned_cols=66 Identities=9% Similarity=0.071 Sum_probs=42.3
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
.++++.++.+|++|-..|||.|+.....|.++..++.. +.++.|..+......+.|.-..+|.-++
T Consensus 24 ~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 89 (114)
T 2oe3_A 24 RNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTAMPTFVL 89 (114)
T ss_dssp HHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred HHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCcccEEEE
Confidence 44444444444444579999999999999887766643 8888888765443344443345554443
No 147
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.75 E-value=0.0024 Score=53.36 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=49.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
.++++||.|+ ..||+.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.|.+.+.
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcE
Confidence 3466766666 68999999999999887776654 488888887654433445544667777888776554
No 148
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.70 E-value=0.0017 Score=51.51 Aligned_cols=74 Identities=15% Similarity=0.203 Sum_probs=43.5
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
+.++..+++.||++|-..||+.|+.....|.++..++. ++.++.|..+......+.|.-..+|--++.+.++.+
T Consensus 11 ~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 11 LATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp CSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred HHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 34444555555666667899999999998888776663 678888876544332334433455655555544433
No 149
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.70 E-value=0.0023 Score=50.02 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=45.3
Q ss_pred hhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 242 ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 242 dL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
+++.+++.+|++|-..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++...++
T Consensus 16 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~ 86 (109)
T 3tco_A 16 EVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQ 86 (109)
T ss_dssp HHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred HHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccCHHHHHhcCcccCCEEEEEcCCc
Confidence 3334344444445589999999999999887777654 4788888776554434445445666555554333
No 150
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.68 E-value=0.0028 Score=51.79 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=46.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh---cCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA---LGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a---lGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
.++.+|++|-..||+.|+.....|.++..++.. .++.++.|-.+......+.|.-..+|.-++.|.++.
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 95 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGES 95 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEE
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCc
Confidence 344445555578999999999999888877763 457788887655433344554466777777777653
No 151
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.61 E-value=0.0026 Score=52.02 Aligned_cols=67 Identities=9% Similarity=0.084 Sum_probs=47.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
++++||.|| ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++.|.+..
T Consensus 35 ~~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 35 DGLWLVEFY-APWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp SSCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTT
T ss_pred CCeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCC
Confidence 456655555 68999999999999887776654 37888887765544344554467777788888765
No 152
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.58 E-value=0.0024 Score=50.62 Aligned_cols=64 Identities=9% Similarity=0.168 Sum_probs=41.4
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
+..+|++|-..|||+|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++...+
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G 89 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDG 89 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSSTTEEEEEETT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCcccEEEEEeCC
Confidence 4444455555899999999998888766664 688888887654433444543555654444433
No 153
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.56 E-value=0.005 Score=48.31 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=40.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
++++||.|+ ..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|--++.
T Consensus 19 ~~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 19 SVPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred CCcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 456666555 69999999999999887766654 488888886654433444433455543333
No 154
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.55 E-value=0.004 Score=51.34 Aligned_cols=70 Identities=14% Similarity=0.218 Sum_probs=47.0
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 244 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 244 ~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
.+++++||.|+ ..||+.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.+.++.+
T Consensus 40 ~~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 40 MKNTVIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp SCCSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ccCCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 34556555555 78999999999999988877763 588888886655443444543566655555555433
No 155
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.54 E-value=0.00039 Score=53.98 Aligned_cols=43 Identities=16% Similarity=0.260 Sum_probs=31.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCC
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEY 290 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs 290 (416)
++++||.|+ ..|||+|+.....|.++..++.. ++.++.|..+.
T Consensus 19 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 61 (106)
T 2yj7_A 19 DKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE 61 (106)
Confidence 456666555 89999999999998887777754 46676666543
No 156
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.52 E-value=0.0044 Score=49.94 Aligned_cols=60 Identities=10% Similarity=0.103 Sum_probs=41.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
+++++||.|+ ..|||.|+.....|.++..++ ++.++.|..+......+.|.-..+|.-++
T Consensus 32 ~~~~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 32 KNKLVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred CCCEEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 3556666665 589999999999998877766 78999888765443344443345554333
No 157
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.48 E-value=0.0056 Score=48.12 Aligned_cols=64 Identities=11% Similarity=0.113 Sum_probs=40.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
+.++.+|++|-..|||.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 3344444455569999999999999887766654 478888876543333344443455554444
No 158
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=96.48 E-value=0.005 Score=48.51 Aligned_cols=68 Identities=12% Similarity=0.209 Sum_probs=44.9
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
.++++||.|+ ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++...++.
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~ 88 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEY 88 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEE
T ss_pred cCCEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEE
Confidence 3456666665 68999999999998887776654 48888888765544344444355665555544443
No 159
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.46 E-value=0.0056 Score=53.02 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=48.5
Q ss_pred chhhcc-CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 240 ALELWR-ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 240 LsdL~~-~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
+.++.. ++++||.|| ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++...++
T Consensus 57 f~~~~~~~~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~ 129 (155)
T 2ppt_A 57 LARAERDDLPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGR 129 (155)
T ss_dssp HHHHTTCSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTE
T ss_pred HHHHHhCCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCe
Confidence 444443 567777777 88999999999999988777764 4888888876544334444435566555544443
No 160
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.44 E-value=0.0059 Score=48.97 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=42.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 310 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsD 310 (416)
++++||.|+ ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.+
T Consensus 30 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~ 92 (121)
T 2i1u_A 30 NKPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTNPETARNFQVVSIPTLILFK 92 (121)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred CCcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhcCCCcCCEEEEEE
Confidence 456666655 58999999999999887776654 5888888876544334444434555544444
No 161
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.26 E-value=0.0036 Score=51.41 Aligned_cols=68 Identities=6% Similarity=0.052 Sum_probs=43.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al-GV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
++++||.|+ ..||+.|+.....|.++..++... ++.++.|-.+......+.|.-..+|.-++.|.+..
T Consensus 25 ~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~ 93 (133)
T 2dj3_A 25 KKDVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDK 93 (133)
T ss_dssp TSEEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCT
T ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCc
Confidence 445555554 789999999999998887777642 46666665443222112233356777777787654
No 162
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=96.26 E-value=0.0073 Score=54.33 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=49.2
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC--CeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG--IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alG--V~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
.++..+++.|++.|-..||+.|+.....|.++..++...+ +.++.|-.+......+.|.-..+|.-++.+.+
T Consensus 26 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 99 (241)
T 3idv_A 26 DNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKG 99 (241)
T ss_dssp HHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCC
Confidence 3445555555555557899999999999999988888766 78888876655443455544566655555443
No 163
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.24 E-value=0.0079 Score=47.52 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=40.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYD 310 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsD 310 (416)
++++||.|+ ..||+.|+.....|.++..++ .++.++.|-.+......+.|.-..+|--++..
T Consensus 21 ~~~v~v~f~-a~wC~~C~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 82 (107)
T 1gh2_A 21 SRLAVVKFT-MRGCGPCLRIAPAFSSMSNKY--PQAVFLEVDVHQCQGTAATNNISATPTFQFFR 82 (107)
T ss_dssp TSCEEEEEE-CSSCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEE
T ss_pred CCEEEEEEE-CCCChhhHHHHHHHHHHHHHC--CCcEEEEEECccCHHHHHhcCCCcccEEEEEE
Confidence 456555554 689999999999888876666 36888888766544333444334555444443
No 164
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.24 E-value=0.0075 Score=49.21 Aligned_cols=67 Identities=12% Similarity=0.006 Sum_probs=45.7
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
.+++++ ++||.| -..||+.|+.....|.++..++...++.++.|-.+......+.|.-..+|.-++.
T Consensus 18 ~~~~~~-~vlv~f-~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 18 RELLEG-DWMIEF-YAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp HHHTSS-EEEEEE-ECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred HHHhCC-CEEEEE-ECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEE
Confidence 344443 555544 5689999999999999888777766899999976654433444543556655555
No 165
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.22 E-value=0.0011 Score=53.99 Aligned_cols=60 Identities=12% Similarity=0.091 Sum_probs=40.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
++++||.|+ ..|||.|+.....|.++..++. ++.++.|..+......+.|.-..+|.-++
T Consensus 36 ~~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 95 (130)
T 1wmj_A 36 GKVVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEAMPTFLF 95 (130)
T ss_dssp TCBCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCSSCCCCB
T ss_pred CCEEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCccceEEE
Confidence 556666665 7899999999988888766664 68888887665433344454345554333
No 166
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=96.22 E-value=0.002 Score=56.84 Aligned_cols=101 Identities=20% Similarity=0.326 Sum_probs=81.7
Q ss_pred chhhhhhccccccchhhHhhcCCCCCcccc--ccChhhhHHhhhhHH--hhhH--------------------HHHhhhc
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK--VMNAEDMDAINMTQQ--QKDA--------------------LEIRSYL 60 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k--~~~~~~~~~~~~~~~--~~~~--------------------~~~r~~l 60 (416)
++.+|+-.-=|..-.+.|.++|+|..-.+. .|+.+|+..|++|.. |+-- -.+..||
T Consensus 16 ~V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~lt~~DL~~lGI~~~ghRkkil~ai~~L~~~~~~~~d~~~~~~v~~WL 95 (148)
T 2kiv_A 16 TVGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGAHPTSVAEWL 95 (148)
T ss_dssp BHHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCCCHHHHHHHCCSSTTSHHHHHHHHHHCSCCCSSCCCCCCCSSHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccCCHHHHHHCCCCCHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHH
Confidence 456666665566777999999999988887 899999999999842 1111 1455689
Q ss_pred cchhhhhhhHHHHHcCC-ChHHHhccCcccchhhccc-ccccccccc
Q 014901 61 HDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGM-KRGHMARFK 105 (416)
Q Consensus 61 ~~~~l~~y~~~~e~~~~-~l~~l~~~~~~~l~~~~~m-~~~h~~~f~ 105 (416)
.+-+|=||++.+.+.|. ++..|..++..||-...|. +-||..|-+
T Consensus 96 ~~i~L~qY~~~F~~~g~~~~~~l~~lt~~dLl~~lGI~~~gHrkrIl 142 (148)
T 2kiv_A 96 DSIELGDYTKAFLINGYTSMDLLKKIAEVELINVLKINLIGHRKRIL 142 (148)
T ss_dssp HTTTCCTHHHHHHHHTCCSHHHHTSCCHHHHHHHTCCCCHHHHHHHH
T ss_pred HHCCcHHHHHHHHHcCCChHHHHHhCCHHHHHHhCCCCChhHHHHHH
Confidence 99999999999999998 6888999999999999999 578987754
No 167
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.19 E-value=0.0055 Score=52.41 Aligned_cols=66 Identities=8% Similarity=0.030 Sum_probs=45.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
++++||.|+ ..||+.|+.....|.++..++ .++.++.|-.+......+.|.-..+|.-++.|.++.
T Consensus 32 ~~~vvv~F~-a~wC~~C~~~~p~l~~l~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~ 97 (153)
T 2wz9_A 32 KSLLVVHFW-APWAPQCAQMNEVMAELAKEL--PQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQK 97 (153)
T ss_dssp TSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCeEEEEEE-CCCCHhHHHHHHHHHHHHHHc--CCeEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEE
Confidence 556666665 689999999999888776665 368999988765443344454466777777774443
No 168
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.12 E-value=0.012 Score=47.30 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=43.7
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
..+.+++++||.|+ ..|||.|+.....|.++..++. ++.++.|-.+......+.|.-..+|.-++...+
T Consensus 14 ~~~~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 82 (110)
T 2l6c_A 14 AHFEGLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFERVPTLVFIRDG 82 (110)
T ss_dssp HHHTTCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESS
T ss_pred HHHHcCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcccCEEEEEECC
Confidence 34444556666555 6899999999998888766654 678888876544332344433556655554333
No 169
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.10 E-value=0.00094 Score=54.88 Aligned_cols=75 Identities=7% Similarity=0.023 Sum_probs=43.5
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEEecCCh--hhHHhhhcCCCCCceeee
Q 014901 235 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAVLHEYI--ESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 235 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~L---s~~~peL~alGV~LVaIspEs~--~~~ik~F~~~~l~f~VLs 309 (416)
.+.+.+.. .+++++||.|+ ..|||+|+.....| .++...+.. ++.++.|-.+.. ....+.|.-..+|.-++.
T Consensus 9 ~~~~~~~~-~~~k~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~ 85 (130)
T 2lst_A 9 PEALALAQ-AHGRMVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEGQELARRYRVPGTPTFVFL 85 (130)
Confidence 34444444 34566666665 88999999998777 555544433 466666654321 111233333566777888
Q ss_pred ccc
Q 014901 310 DQG 312 (416)
Q Consensus 310 Dp~ 312 (416)
|++
T Consensus 86 d~~ 88 (130)
T 2lst_A 86 VPK 88 (130)
Confidence 753
No 170
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.05 E-value=0.007 Score=48.67 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=31.8
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc----CCeEEEEec
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL----GIQLFAVLH 288 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al----GV~LVaIsp 288 (416)
+++++||.|| ..||+.|+.....|.++..++... ++.++.|-.
T Consensus 24 ~~~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~ 70 (121)
T 2djj_A 24 DTKDVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDA 70 (121)
T ss_dssp TTSCEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEET
T ss_pred CCCCEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEEC
Confidence 4567766666 579999999999998887777652 566666654
No 171
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.02 E-value=0.011 Score=49.90 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=46.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
.++++||.|| ..||+.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.+.++.+
T Consensus 54 ~~k~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 122 (148)
T 3p2a_A 54 DDLPMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMI 122 (148)
T ss_dssp CSSCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred cCCcEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEE
Confidence 3456666665 78999999999999888777654 488888877655443445544566655555544433
No 172
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.02 E-value=0.0031 Score=50.08 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=42.7
Q ss_pred hhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc--CCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 242 ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL--GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 242 dL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al--GV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
++.+++..+|++|-..|||.|+.....|.++..++... ++.++.|-.+......+.|.-..+|.-++...+
T Consensus 19 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 91 (120)
T 1mek_A 19 EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNG 91 (120)
T ss_dssp HHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESS
T ss_pred HHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCC
Confidence 34444444555555789999999999998887777654 466666654432222344443455555554443
No 173
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=95.99 E-value=0.008 Score=50.08 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=41.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
+.++.+|++|-..||+.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++.
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4445555666678999999999998887766654 478888876543332334433455555554
No 174
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.94 E-value=0.013 Score=48.32 Aligned_cols=43 Identities=7% Similarity=0.001 Sum_probs=31.4
Q ss_pred CCCEEEEeecC------CCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 014901 246 ESPAVLLCIRR------PGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 289 (416)
Q Consensus 246 ~~pvVLvFyRg------~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE 289 (416)
++++||.|+-. .|||.|+.....|.++..++.. ++.++.|-.+
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~ 72 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG 72 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC
Confidence 45666666544 2999999999999887776643 6778777663
No 175
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=95.90 E-value=0.0093 Score=49.67 Aligned_cols=57 Identities=11% Similarity=-0.010 Sum_probs=37.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 305 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f 305 (416)
++++||.|| ..||+.|+.....|.++..++. ++.++.|-.+......+.|.-..+|.
T Consensus 37 ~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 93 (125)
T 1r26_A 37 DILTVAWFT-AVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQLPT 93 (125)
T ss_dssp SSCEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCEEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCcccE
Confidence 456666555 7899999999999988776663 68888887654333233333234443
No 176
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.81 E-value=0.0078 Score=53.68 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=44.8
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhc---CCCCCceeeeccchHH
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFW---PRYWGGVVVYDQGMEF 315 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~---~~~l~f~VLsDp~r~l 315 (416)
++++|+.|--.|||.|+.++-.|.++..+.. ++.++.|..+........|. -..+|--++.|.+.++
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCE
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCE
Confidence 3455555668899999999999988765443 57888887544333344564 2456666888887443
No 177
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.68 E-value=0.05 Score=49.09 Aligned_cols=42 Identities=12% Similarity=0.013 Sum_probs=30.5
Q ss_pred cceEEEEecCCCcEEEEEe---cCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 362 KGGLFIVGRGRSGIAYQFI---ERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 362 lGGtFVId~gG~~I~yah~---d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
.|-+++++++| ++.|... .....+.+...++|+.+..+-.++
T Consensus 105 ~Pt~v~l~~dG-~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~~~~ 149 (173)
T 3ira_A 105 WPLNIIMTPGK-KPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQ 149 (173)
T ss_dssp SSEEEEECTTS-CEEEEESSCCSSCBTTBCCHHHHHHHHHHHHHHS
T ss_pred CcceeeECCCC-CceeeeeeCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 57899999996 7888632 334567788899998887765443
No 178
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.62 E-value=0.016 Score=52.83 Aligned_cols=68 Identities=9% Similarity=0.076 Sum_probs=46.4
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
+++++||.|| ..||+.|+.....|.++..++.. .+.++.|..+......+.|.-..+|.-++.+.++.
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 96 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEV 96 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEE
T ss_pred cCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeE
Confidence 3456666666 78999999999999888777764 38888888765543344454356666566554443
No 179
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=95.59 E-value=0.0093 Score=51.53 Aligned_cols=44 Identities=18% Similarity=0.343 Sum_probs=26.3
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEEecCC
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAVLHEY 290 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~L---s~~~peL~alGV~LVaIspEs 290 (416)
+++++||.| -..||+.|+.....+ .++...+++ ++.+|.|..+.
T Consensus 46 ~gk~vlv~F-~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~ 92 (172)
T 3f9u_A 46 HNKPVMLDF-TGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN 92 (172)
T ss_dssp TTCCEEEEE-ECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC
T ss_pred cCCeEEEEE-ECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc
Confidence 355655554 567999999864333 222223333 67888887654
No 180
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.49 E-value=0.008 Score=50.11 Aligned_cols=68 Identities=9% Similarity=0.037 Sum_probs=44.6
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCC------CCCceeeeccchHHH
Q 014901 248 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPR------YWGGVVVYDQGMEFF 316 (416)
Q Consensus 248 pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~------~l~f~VLsDp~r~lY 316 (416)
|+||.|+ ..||+.|+.....|.++..++...++.++.|-.+......+.|.-. .+|--++...++.+.
T Consensus 28 ~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~ 101 (137)
T 2dj0_A 28 TWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAM 101 (137)
T ss_dssp CEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEE
T ss_pred EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEE
Confidence 5555554 6899999999999988887776557888888765544333444333 555545554444443
No 181
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.45 E-value=0.028 Score=46.97 Aligned_cols=59 Identities=7% Similarity=0.054 Sum_probs=37.8
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 248 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 248 pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
+.||+.|-..||+.|+.....|.++..++ ++.++.|-.+......+.|.-..+|.-++.
T Consensus 41 k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 41 SSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCCCCEEEEE
Confidence 34444555689999999999888876655 577777776544332334433455555444
No 182
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=95.40 E-value=0.039 Score=45.15 Aligned_cols=67 Identities=10% Similarity=-0.070 Sum_probs=42.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh----cCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA----LGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a----lGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
++++||.| -..||+.|+.....+.++..++.. .++.++.|-.+......+.|.-..+|--++.+.+.
T Consensus 33 ~~~vlv~F-~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 103 (127)
T 3h79_A 33 EKDVFVLY-YVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRID 103 (127)
T ss_dssp TCEEEEEE-ECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSC
T ss_pred CCCEEEEE-ECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCC
Confidence 44555555 578999999999999887665542 34677777665543333444435566555655554
No 183
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=95.29 E-value=0.034 Score=46.26 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=42.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
.+++||.|| ..|||.|+.....|.++..++.. ++.++.|..+......+.|.-..+|.-++...+
T Consensus 50 ~~~vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G 114 (140)
T 1v98_A 50 APLTLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRG 114 (140)
T ss_dssp CCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred CCCEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCCHHHHHHCCCCccCEEEEEeCC
Confidence 345555554 78999999999999887777754 488888876654433344443556654444333
No 184
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.03 E-value=0.045 Score=46.97 Aligned_cols=68 Identities=13% Similarity=0.133 Sum_probs=45.3
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
+..||+.|-..||+.|+.....|.++..++... +.++.|-.+......+.|.-..+|.-++...++.+
T Consensus 23 ~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEE
Confidence 444555556889999999999999887777542 77888876554443444543566665655555555
No 185
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=94.96 E-value=0.033 Score=44.88 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=27.0
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
++++||.| -..|||+|+.....|.++..++ +.+++.|..
T Consensus 29 ~~~~~v~f-~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~~ 67 (118)
T 1zma_A 29 KETATFFI-GRKTCPYCRKFAGTLSGVVAET---KAHIYFINS 67 (118)
T ss_dssp TCCEEEEE-ECTTCHHHHHHHHHHHHHHHHH---CCCCEEEET
T ss_pred CCeEEEEE-ECCCCccHHHHHHHHHHHHHhc---CCeEEEEEC
Confidence 34555555 4589999999999888766544 356666643
No 186
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=94.93 E-value=0.046 Score=50.11 Aligned_cols=66 Identities=20% Similarity=0.069 Sum_probs=45.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh--cCCeEEEEec--CChhhHHhhhcCCCCCceeeecc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA--LGIQLFAVLH--EYIESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a--lGV~LVaIsp--Es~~~~ik~F~~~~l~f~VLsDp 311 (416)
.+..+|+.|-..||+.|+.....+.++..++.. .++.++.|-. +......+.|.-..+|--++.++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeC
Confidence 334455555578999999999999988888776 4788888887 32332234443356776677776
No 187
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=94.83 E-value=0.02 Score=42.89 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=36.5
Q ss_pred EEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 249 AVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 249 vVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
++|++|-..|||+|+.....|.++..++. .++.++.|-.+......+.|.-..+|.-++
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 62 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVMENPQKAMEYGIMAVPTIVI 62 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSSSCCTTTSTTTCCSSEEEE
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCCCHHHHHHCCCcccCEEEE
Confidence 34445556999999999998887665554 257888887544332223333244554444
No 188
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=94.81 E-value=0.019 Score=50.53 Aligned_cols=74 Identities=9% Similarity=0.044 Sum_probs=45.5
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEec--CChhhHHhhhcCCCCCceeeecc-chHHHHHhC
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLH--EYIESEVKDFWPRYWGGVVVYDQ-GMEFFKALG 320 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al-GV~LVaIsp--Es~~~~ik~F~~~~l~f~VLsDp-~r~lYkALG 320 (416)
.++|++|.|+ -.||+.|+.....+.+. +++.+. +..+|.|-- +..+. ...|.-.++|--++.|+ ++.+++..|
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m~p~~~~~-~~~~~~~~~~fv~V~vD~e~~~~-~~~~~v~~~PT~~f~~~~G~~v~~~~G 119 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQALKKVFAQN-EEIQEMAQNKFIMLNLMHETTDK-NLSPDGQYVPRIMFVDPSLTVRADIAG 119 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHHHHHHHHC-HHHHHHHHHTCEEEEESSCCSCG-GGCTTCCCSSEEEEECTTSCBCTTCCC
T ss_pred cCCcEEEEEE-CCCCHhHHHHHHHHhcC-HHHHHHhhcCeEEEEecCCchhh-HhhcCCCCCCEEEEECCCCCEEEEEeC
Confidence 4678777776 89999999999888764 333321 223444443 22221 23343367787899994 555666556
Q ss_pred C
Q 014901 321 G 321 (416)
Q Consensus 321 l 321 (416)
.
T Consensus 120 ~ 120 (151)
T 3ph9_A 120 R 120 (151)
T ss_dssp S
T ss_pred C
Confidence 5
No 189
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=94.73 E-value=0.024 Score=42.45 Aligned_cols=57 Identities=11% Similarity=0.121 Sum_probs=37.1
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
|++|-..|||+|+.....|.++..++.. ++.++.|-.+......+.|.-..+|.-++
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 61 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVDREKAIEYGLMAVPAIAI 61 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTCGGGGGGTCSSCSSEEEE
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHhCCceeeCEEEE
Confidence 4445568999999999988877666643 68888887654333234443345665455
No 190
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=94.34 E-value=0.052 Score=46.21 Aligned_cols=73 Identities=12% Similarity=0.005 Sum_probs=45.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhC
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALG 320 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALG 320 (416)
++|+||.| -..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|--++.+.++.+...+|
T Consensus 23 ~k~vlv~F-~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g 95 (142)
T 1qgv_A 23 DRVVVIRF-GHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLG 95 (142)
T ss_dssp SSEEEEEE-ECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC
T ss_pred CCEEEEEE-ECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecC
Confidence 44555555 568999999999999888777643 47888887554332223333345565555566655543333
No 191
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=94.26 E-value=0.044 Score=44.64 Aligned_cols=65 Identities=23% Similarity=0.295 Sum_probs=52.6
Q ss_pred cchhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH------HhhhHHHHhhhccchhhhhhhH
Q 014901 4 YAMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ------QQKDALEIRSYLHDRALMQYAD 70 (416)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~------~~~~~~~~r~~l~~~~l~~y~~ 70 (416)
+++.+|+-.-=|..-.+.|.++|++++..+.-|+.+|+..|..|. ..+..-+||..+.|..+ ||+
T Consensus 16 ~~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GHrkkIl~ai~~L~~~~~~~~~--~~~ 86 (91)
T 1x40_A 16 VDIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQKIGISPTGHRRRILKQLQIILSKMQDIPI--YAS 86 (91)
T ss_dssp CBHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGCCHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCCCC--CCC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhcCHHHHHHCCCCCHhHHHHHHHHHHHHHhhcCCCCe--ecC
Confidence 456788888888888999999999999999999999999999882 23344568888877777 764
No 192
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=94.24 E-value=0.067 Score=54.34 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=49.9
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
+.+++..+..+|+.|-..||+.|+.....+.++..++...++.++.|-.+......+.|.-.++|--++...+
T Consensus 24 f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g 96 (504)
T 2b5e_A 24 FNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNS 96 (504)
T ss_dssp HHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCC
Confidence 3444555555566666799999999999999888888776899999987665443445543455544444433
No 193
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=94.19 E-value=0.085 Score=47.12 Aligned_cols=64 Identities=11% Similarity=-0.048 Sum_probs=41.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh---cCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA---LGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a---lGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
+++++|+.|-..|||+|+.....|.++..++.. -++.++.|-.+......+.|.-..+|--++.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 199 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQ 199 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEE
Confidence 467845555579999999999999888777763 3677777765543322344433455553443
No 194
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=94.09 E-value=0.046 Score=49.01 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=45.9
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcC--CeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALG--IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alG--V~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
.++..++..+++.|-..||+.|+.....|.++..++...+ +.++.|-.+......+.|.-..+|--++.+.++
T Consensus 141 ~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~ 215 (241)
T 3idv_A 141 DEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGR 215 (241)
T ss_dssp HHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTE
T ss_pred HHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCe
Confidence 3444444445555558899999999888888887777654 778888765443333444334555545555443
No 195
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.09 E-value=0.064 Score=51.59 Aligned_cols=67 Identities=12% Similarity=0.163 Sum_probs=45.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCCh--hhHHhhhcCCCCCceeeeccchH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYI--ESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~--~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
++++||.|| ..||+.|+.....|.++..++... +.++.|-.+.. ....+.|.-..+|--++.+.+..
T Consensus 35 ~~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~ 103 (298)
T 3ed3_A 35 NYTSLVEFY-APWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKI 103 (298)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCccCHHHHHhCCCCccceEEEEECCce
Confidence 345666555 789999999999999888777653 88888877632 22234443356666666666653
No 196
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=94.04 E-value=0.054 Score=48.57 Aligned_cols=63 Identities=13% Similarity=0.050 Sum_probs=42.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
.++++||.|+ ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++.
T Consensus 113 ~~~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 175 (210)
T 3apq_A 113 SGELWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDDRMLCRMKGVNSYPSLFIF 175 (210)
T ss_dssp HSCCEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCcEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCccHHHHHHcCCCcCCeEEEE
Confidence 4566666655 68999999999999887777654 488888876654433344443556655544
No 197
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.01 E-value=0.15 Score=41.03 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=30.7
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 014901 235 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 289 (416)
Q Consensus 235 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE 289 (416)
|....|.......++|++| -..|||+|+.....|.++.. ++.+.-|--+
T Consensus 4 ~~~~~l~~~~~~~~~v~~f-~~~~C~~C~~~~~~L~~l~~-----~i~~~~vdi~ 52 (100)
T 1wjk_A 4 GSSGNLSASNRALPVLTLF-TKAPCPLCDEAKEVLQPYKD-----RFILQEVDIT 52 (100)
T ss_dssp CCCCCCCCSCCCCCEEEEE-ECSSCHHHHHHHHHTSTTSS-----SSEEEEEETT
T ss_pred CcchhhhhccCCCCEEEEE-eCCCCcchHHHHHHHHHhhh-----CCeEEEEECC
Confidence 4444455544556666655 56799999987777765432 3666666544
No 198
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=93.86 E-value=0.086 Score=53.01 Aligned_cols=67 Identities=7% Similarity=0.024 Sum_probs=43.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEecCChhhHHhhhcCCCCCceeeeccchH
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGME 314 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al-GV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~ 314 (416)
++++||.|| ..||+.|+.....|.++...+... ++.++.|-.+..+ ....|.-..+|--++.+.+..
T Consensus 370 ~k~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~-~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 370 NKDVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAND-VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp TCEEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSC-CCTTCCCCSSSEEEEECTTCT
T ss_pred CCcEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchh-hHhhCCCcccCEEEEEeCCCe
Confidence 345555555 899999999999998888777654 5666666544322 123343356676677777665
No 199
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=93.70 E-value=0.053 Score=50.10 Aligned_cols=65 Identities=14% Similarity=0.136 Sum_probs=41.5
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
+++||.|| ..||+.|+.....|.++..++. ++.++.|-.+.++ ....|.-..+|--++...+..+
T Consensus 121 k~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~~~~-l~~~~~i~~~PTl~~~~~G~~v 185 (217)
T 2trc_P 121 TTIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRASNTG-AGDRFSSDVLPTLLVYKGGELI 185 (217)
T ss_dssp CEEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHHHHT-CSTTSCGGGCSEEEEEETTEEE
T ss_pred cEEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECCcHH-HHHHCCCCCCCEEEEEECCEEE
Confidence 56666666 7999999999999988777763 6888888765211 1223332455554554444433
No 200
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.66 E-value=0.057 Score=50.27 Aligned_cols=65 Identities=12% Similarity=0.123 Sum_probs=43.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
++++||.|| ..||+.|+.....|.++..++.. .+.++.|-.+......+.|.-..+|.-++...+
T Consensus 26 ~~~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G 90 (287)
T 3qou_A 26 TTPVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNG 90 (287)
T ss_dssp TSCEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTCHHHHHTTTCCSSSEEEEEETT
T ss_pred CCeEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccCHHHHHHcCCCCCCeEEEEECC
Confidence 466666666 78999999999888887766653 488888887654433455543556655444333
No 201
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=92.61 E-value=0.18 Score=52.42 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=45.8
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhhc-C------CeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-G------IQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al-G------V~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
+|+||.|| -.||+.|+.....+.++..++... | +.++.|-.+......+.|.-..+|--++.+++.
T Consensus 43 k~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 43 CPWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESS
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCC
Confidence 57777766 689999999999998887777533 3 788888876554434455435666666665543
No 202
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=92.38 E-value=0.12 Score=44.65 Aligned_cols=48 Identities=10% Similarity=0.054 Sum_probs=34.0
Q ss_pred CCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 235 TPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 235 G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
+..+.+++ .+.|++|+.|=-+|||+|+.....|.++..+... ++++.+
T Consensus 12 ~~~~~~G~--~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~ 59 (175)
T 3gyk_A 12 PNAPVLGN--PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYR 59 (175)
T ss_dssp TTSCEEEC--TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEE
T ss_pred CCCCCcCC--CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEE
Confidence 44445555 4678888999999999999999888776554322 455544
No 203
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=92.15 E-value=0.075 Score=48.40 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=28.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
+++++|+.|=-+|||+|+.....|.+.. +.|++++.+-
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~----~~~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYN----ALGITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHH----HTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHH----hCCcEEEEEE
Confidence 4566677777999999999988877643 2378888764
No 204
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=92.14 E-value=0.23 Score=44.54 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=39.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
++|++|+.|-..||++|+.....+.++..++. ++.++.|-.+......+.|.-..+|--++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 195 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASENQDLAEQFQVVGVPKIVI 195 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGCHHHHHHTTCCSSSEEEE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 46775665557999999999998887765552 67777776544333234443345565455
No 205
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=92.06 E-value=0.18 Score=51.07 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=31.7
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc--CCeEEEEec
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL--GIQLFAVLH 288 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al--GV~LVaIsp 288 (416)
.++++||.|| ..||+.|+.....+.++..++... ++.++.|-.
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~ 419 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDH 419 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEG
T ss_pred CCCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecC
Confidence 3567777776 699999999999999888777633 455555543
No 206
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=91.92 E-value=0.3 Score=45.32 Aligned_cols=62 Identities=11% Similarity=-0.104 Sum_probs=39.0
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhhh---cCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA---LGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a---lGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
++++|+.|-..|||+|+..+..|.++..++.. .++.++.|-........+.|.-..+|--++
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i 202 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI 202 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE
Confidence 56656555569999999999999887766632 467777775443332234443344554344
No 207
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=91.87 E-value=0.032 Score=45.64 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=25.8
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 237 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 237 ~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
.+++++.. ++++||.|| -.|||.|+.....|.++..++
T Consensus 4 ~~~la~~~-~k~~vV~F~-A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 4 AVGLAAHL-RQIGGTMYG-AYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHHHHHH-HHHTCEEEE-CTTCHHHHHHHHHHGGGGGGS
T ss_pred hhHHHHhc-CCCEEEEEE-CCCCHHHHHHHHHHHHHHHhC
Confidence 34455533 345555554 689999999998888776555
No 208
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=91.85 E-value=0.4 Score=38.95 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=27.3
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 240 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
+.++....++ ++|..+ .|||+|+....-|.+ +|+....|-
T Consensus 8 ~~~~i~~~~v-vvy~~g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vd 51 (109)
T 1wik_A 8 LKVLTNKASV-MLFMKGNKQEAKCGFSKQILEILNS-------TGVEYETFD 51 (109)
T ss_dssp HHHHHTTSSE-EEEESSTTTCCCSSTHHHHHHHHHH-------TCSCEEEEE
T ss_pred HHHHhccCCE-EEEEecCCCCCCCchHHHHHHHHHH-------cCCCeEEEE
Confidence 4566777774 556666 899999987766654 356655554
No 209
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=91.54 E-value=0.38 Score=38.97 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=27.5
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCC
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEY 290 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs 290 (416)
++++||.|| -.||+.|+.....|.++...+. ++.++.|-.+.
T Consensus 20 ~k~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d~ 61 (105)
T 3zzx_A 20 NKLVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVDE 61 (105)
T ss_dssp TSEEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETTT
T ss_pred CCEEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEeccc
Confidence 345555555 6899999999888877655442 45555555443
No 210
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=91.45 E-value=0.17 Score=49.86 Aligned_cols=64 Identities=6% Similarity=0.035 Sum_probs=40.6
Q ss_pred hhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhh-----cCCeEEEEecCChhhHHhhhcCCCCCc
Q 014901 242 ELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA-----LGIQLFAVLHEYIESEVKDFWPRYWGG 305 (416)
Q Consensus 242 dL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a-----lGV~LVaIspEs~~~~ik~F~~~~l~f 305 (416)
+++.++..||+.|-..||+.|+..+..+.++..++++ -++.++.|-.+......+.|.-.++|-
T Consensus 17 ~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt 85 (382)
T 2r2j_A 17 EILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPT 85 (382)
T ss_dssp HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESE
T ss_pred HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCE
Confidence 3444444455555579999999999999888877753 237777777655443334443244443
No 211
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=91.35 E-value=0.1 Score=41.80 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=21.4
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
.++.+.+++|+ |-..|||+|+.....|.+.
T Consensus 14 ~~~~~~~~vv~--f~a~~C~~C~~~~~~l~~~ 43 (116)
T 2e7p_A 14 KELASSAPVVV--FSKTYCGYCNRVKQLLTQV 43 (116)
T ss_dssp HHHHTSSSEEE--EECTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEE--EECCCChhHHHHHHHHHHc
Confidence 45666666554 4568999999887777664
No 212
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=91.27 E-value=0.28 Score=40.98 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=42.3
Q ss_pred EEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCC
Q 014901 249 AVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGG 321 (416)
Q Consensus 249 vVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl 321 (416)
.||+.|-..||+.|+.....|.++..++ .++.++.|-.+... +.|.-..+|--++.+.++.+.+..|.
T Consensus 32 ~vvv~f~a~wC~~C~~~~p~l~~la~~~--~~v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~ 99 (135)
T 2dbc_A 32 WVVIHLYRSSVPMCLVVNQHLSVLARKF--PETKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGI 99 (135)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHC--SSEEEEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEEST
T ss_pred EEEEEEECCCChHHHHHHHHHHHHHHHC--CCcEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeE
Confidence 4444455699999999999888776655 25777777654422 33433456655666655555443344
No 213
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=90.98 E-value=0.21 Score=43.12 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=35.2
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEe
Q 014901 237 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVL 287 (416)
Q Consensus 237 ~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al-GV~LVaIs 287 (416)
.+.++. .+.|+.|+.|=.++||+|......+.+...++.+. .++++.+-
T Consensus 19 ~~~~G~--~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~ 68 (175)
T 1z6m_A 19 GLHIGE--SNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKL 68 (175)
T ss_dssp SEEESC--TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred CcccCC--CCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEe
Confidence 344554 36788888999999999999998887766655333 47776653
No 214
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=90.91 E-value=0.17 Score=46.05 Aligned_cols=37 Identities=22% Similarity=0.305 Sum_probs=28.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
+++++|+.|--+|||||+.....|.++ .+.|++++.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~----~~~~v~v~~~ 121 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEY----NDLGITVRYL 121 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHH----HHTTEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHH----HhCCcEEEEE
Confidence 467778888899999999988877663 3347888765
No 215
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=90.90 E-value=0.12 Score=46.08 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=26.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~L---s~~~peL~alGV~LVaI 286 (416)
.+|+||.|+ -+|||+|+.....| .++...+.. .++++-+
T Consensus 14 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~ 55 (189)
T 3l9v_A 14 DAPAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKY 55 (189)
T ss_dssp TCCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEE
T ss_pred CCCEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEE
Confidence 368899888 89999999887654 233333322 4676665
No 216
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=90.82 E-value=0.23 Score=40.90 Aligned_cols=64 Identities=11% Similarity=0.113 Sum_probs=37.2
Q ss_pred cCCCEEEEeecCCCCc--------------chHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeee
Q 014901 245 RESPAVLLCIRRPGCI--------------MCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVY 309 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP--------------~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLs 309 (416)
+.++.||+.|-..||+ .|+.....+.++..++.. .+.++.|..+......+.|.-..+|.-++.
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 96 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 96 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTTGGGGTCCBSSEEEEE
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4444444455578999 999999999888777754 488888876554332334433456655554
No 217
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=90.65 E-value=0.62 Score=41.38 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=30.5
Q ss_pred CCCEEEEeecCC-CCcchHHHHHHHHhccchhhhcCCeEEEEecCC
Q 014901 246 ESPAVLLCIRRP-GCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEY 290 (416)
Q Consensus 246 ~~pvVLvFyRg~-gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs 290 (416)
++|++|++|--. ||++|+.....|.++... .-.+.++.|-.+.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~ 64 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDT 64 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTS
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCC
Confidence 467776666677 999999988888775432 1247777777665
No 218
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=90.59 E-value=0.15 Score=41.10 Aligned_cols=31 Identities=13% Similarity=0.175 Sum_probs=21.2
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHh
Q 014901 240 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYA 271 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~ 271 (416)
+.++.+..+++| |+.+ .|||+|+....-|.+
T Consensus 10 ~~~~i~~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~ 44 (105)
T 2yan_A 10 LKVLTNKASVML-FMKGNKQEAKCGFSKQILEILNS 44 (105)
T ss_dssp HHHHHTSSSEEE-EESBCSSSBCTTHHHHHHHHHHH
T ss_pred HHHHhccCCEEE-EEecCCCCCCCccHHHHHHHHHH
Confidence 456667677554 6663 899999976666544
No 219
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=90.58 E-value=0.18 Score=44.38 Aligned_cols=41 Identities=15% Similarity=0.021 Sum_probs=28.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
+++++|+.|-.+|||+|+.....|.++..++.. .+.++-+-
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~ 64 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVP 64 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEE
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEe
Confidence 456677777799999999988888766555433 45554443
No 220
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=90.28 E-value=0.1 Score=44.86 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=36.2
Q ss_pred chhhccC-CCEEEEeecCC-CCcchHHHHHHHHhccchhhhcCCe--EEEEecCChhhHHhhhcCCCCCceeeeccchHH
Q 014901 240 ALELWRE-SPAVLLCIRRP-GCIMCRAEAHQLYAKKPIFDALGIQ--LFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEF 315 (416)
Q Consensus 240 LsdL~~~-~pvVLvFyRg~-gCP~Cn~el~~Ls~~~peL~alGV~--LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~l 315 (416)
+.+++.. +++||.|+-.+ ||+.|+...-.|.++..++ -++. ++.|-.+........|.-..+|--++.-.++.+
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~v 104 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKLR 104 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHHHHHHHHTC--TTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC---
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--cccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEEE
Confidence 3344443 45666555333 4999999988888877666 2477 888875543332334433556655666444444
Q ss_pred HH
Q 014901 316 FK 317 (416)
Q Consensus 316 Yk 317 (416)
.+
T Consensus 105 ~~ 106 (142)
T 2es7_A 105 GA 106 (142)
T ss_dssp -C
T ss_pred EE
Confidence 43
No 221
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=90.20 E-value=0.59 Score=34.18 Aligned_cols=54 Identities=9% Similarity=0.137 Sum_probs=32.6
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceee
Q 014901 250 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVV 308 (416)
Q Consensus 250 VLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VL 308 (416)
.|.||- .|||.|+.....|.++..++.. .+.++.|- ..+ ..+.|.-...|.-++
T Consensus 3 ~v~f~a-~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~--~~~-~~~~~~v~~~Pt~~~ 56 (77)
T 1ilo_A 3 KIQIYG-TGCANCQMLEKNAREAVKELGI-DAEFEKIK--EMD-QILEAGLTALPGLAV 56 (77)
T ss_dssp EEEEEC-SSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC--SHH-HHHHHTCSSSSCEEE
T ss_pred EEEEEc-CCChhHHHHHHHHHHHHHHcCC-ceEEEEec--CHH-HHHHCCCCcCCEEEE
Confidence 466666 5999999999988876655532 35555554 222 234443345555455
No 222
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=90.11 E-value=0.069 Score=42.69 Aligned_cols=51 Identities=22% Similarity=0.539 Sum_probs=46.0
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
++..||..-+|=||++.+++.|.+ +..|+.++..|| ..-|... ||-.|.+.
T Consensus 18 ~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL-~~lGI~~~GhRkkIl~ 70 (82)
T 2kso_A 18 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDI-KRIGVRLPGHQKRIAY 70 (82)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHH-HHHHCCCTTHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHH-HHCCCCChhHHHHHHH
Confidence 567799999999999999999999 999999999999 7899986 99877653
No 223
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=90.11 E-value=0.38 Score=48.22 Aligned_cols=64 Identities=11% Similarity=0.029 Sum_probs=43.0
Q ss_pred chhhccCC---CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCC
Q 014901 240 ALELWRES---PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWG 304 (416)
Q Consensus 240 LsdL~~~~---pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~ 304 (416)
+.+++.+. ..+|+.|-..||+.|+.....|.++..++... +.++.|-.+......+.|.-..+|
T Consensus 11 f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~P 77 (481)
T 3f8u_A 11 FESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSGYP 77 (481)
T ss_dssp HHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCEES
T ss_pred HHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCCCC
Confidence 34444443 55555666799999999999998888777665 888888876654434444323444
No 224
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=90.05 E-value=0.24 Score=47.91 Aligned_cols=64 Identities=11% Similarity=-0.004 Sum_probs=37.8
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHH-------HHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCC
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQ-------LYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWG 304 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~-------Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~ 304 (416)
+.++..++..||+.|--.||+ |+..+.. +.++..+++..++.++.|-.+......+.|.-..+|
T Consensus 21 f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 91 (350)
T 1sji_A 21 FKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEG 91 (350)
T ss_dssp HHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTT
T ss_pred HHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccc
Confidence 344455544555555589999 9766555 455555565557888888766544333444323444
No 225
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=89.80 E-value=0.09 Score=41.62 Aligned_cols=51 Identities=20% Similarity=0.392 Sum_probs=45.5
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~-~l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
++..||+.-+|-||.+.+++.|. ++..|+.++..||. ..|+.. ||-.|.+.
T Consensus 13 ~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~-~lGI~~~GhrkkIl~ 65 (82)
T 1b4f_A 13 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDIL-RVGVTLAGHQKKILN 65 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHH-HTTCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHH-HcCCCCHHHHHHHHH
Confidence 46679999999999999999999 89999999999998 689986 99877653
No 226
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=89.59 E-value=0.12 Score=45.74 Aligned_cols=53 Identities=25% Similarity=0.479 Sum_probs=48.8
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhccccc-ccccccccc
Q 014901 54 LEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKR-GHMARFKDR 107 (416)
Q Consensus 54 ~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~~-~h~~~f~~~ 107 (416)
-.+..||+.=||=||++.+...|.++..|..++..|| .+.|++. ||-.+++..
T Consensus 11 ~~V~~WL~~lgL~~Y~~~F~~~g~d~~~l~~lt~~DL-~~lGIt~~gHrkkil~a 64 (149)
T 3sei_A 11 EAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDL-TAIGVTKPGHRKKIAAE 64 (149)
T ss_dssp HHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHH-HHTTCCSHHHHHHHHHH
T ss_pred HHHHHHHHHCCcHHHHHHHHHcCCCHHHHccCCHHHH-HHcCCCCHHHHHHHHHH
Confidence 4788999999999999999999999999999999999 6999987 999998763
No 227
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=89.59 E-value=0.098 Score=42.50 Aligned_cols=55 Identities=20% Similarity=0.312 Sum_probs=48.0
Q ss_pred hHHHHhhhccch-hhhhhhHHHHHcCCChHHHhccCcccchhhccccccccccccc
Q 014901 52 DALEIRSYLHDR-ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKRGHMARFKD 106 (416)
Q Consensus 52 ~~~~~r~~l~~~-~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~~~h~~~f~~ 106 (416)
..-++..||..- |+-+|++.++...++-.-|+.++..||-+..|+|-||.-+.+.
T Consensus 18 s~edV~~wL~~l~gl~~y~~~F~~~~IdG~~LL~Lt~~dL~k~lgIklG~r~kI~~ 73 (89)
T 1kw4_A 18 SVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVA 73 (89)
T ss_dssp CHHHHHHHHHTSTTCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHCcChHHHHHHHHHhCccHHHHhcCCHHHHHHHcCCCHHHHHHHHH
Confidence 344677888887 9999999999999999999999999998899999999776543
No 228
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=89.53 E-value=0.083 Score=41.97 Aligned_cols=51 Identities=24% Similarity=0.441 Sum_probs=46.3
Q ss_pred HHhhhccchhhhhhhHHHHHcC-CChHHHhccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASG-KSLPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~-~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
++..||+.-||=||++.+++.| .++..|+.++..||-. -|+. .||-.|.+.
T Consensus 17 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~-lGI~~~GhrkkIl~ 69 (83)
T 2qkq_A 17 SVGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLR-IGVTLAGHQKKILA 69 (83)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHH-HTCCCHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhCCHHHHHH-CCCCCHHHHHHHHH
Confidence 5677999999999999999999 8999999999999965 8998 899888764
No 229
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=89.48 E-value=0.26 Score=46.64 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=44.0
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccchHHHHHhCC
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGMEFFKALGG 321 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl 321 (416)
+++|||.|| ..||+.|+.....|.++..++. ++.++.|-.+..+ ....|.-..+|--++.+.+..+.+-.|.
T Consensus 133 ~k~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~~~-l~~~~~I~~~PTll~~~~G~~v~~~vG~ 204 (245)
T 1a0r_P 133 ITTIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASNTG-AGDRFSSDVLPTLLVYKGGELLSNFISV 204 (245)
T ss_dssp TCEEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHHHC-CTTSSCTTTCSEEEEEETTEEEEEETTG
T ss_pred CCEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCcHH-HHHHCCCCCCCEEEEEECCEEEEEEeCC
Confidence 345555555 6999999999999988776664 5888888754321 1233433455654555544444433343
No 230
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=89.42 E-value=0.095 Score=41.55 Aligned_cols=51 Identities=25% Similarity=0.480 Sum_probs=45.6
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
++..||+.-+|-||++.+++.|.+ +..|..++..||. .-|+.. ||-.|.+.
T Consensus 9 ~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~-~lGI~~~GhrkkIl~ 61 (81)
T 1ucv_A 9 TVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVR-ALGITLMGHQKKILG 61 (81)
T ss_dssp BHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHH-hCCCCChhHHHHHHH
Confidence 456799999999999999999999 9999999999995 799987 99887763
No 231
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=89.13 E-value=0.11 Score=40.49 Aligned_cols=52 Identities=21% Similarity=0.344 Sum_probs=46.3
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhcccc-ccccccccc
Q 014901 54 LEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 54 ~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
-++..||..-||=+|++.++..+.+...|+.++..|| .+.|++ -||-.+.+.
T Consensus 8 ~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt~~dL-~~lGI~~~Ghr~kIl~ 60 (76)
T 2f3n_A 8 FDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKEDF-VELGVTRVGHRENIER 60 (76)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHTTCCGGGGGGCCHHHH-HHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHcCCCHHHHccCCHHHH-HHcCCCChhHHHHHHH
Confidence 3566799999999999999999999999999999999 799998 799877664
No 232
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.93 E-value=0.14 Score=41.19 Aligned_cols=51 Identities=22% Similarity=0.532 Sum_probs=45.4
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
++..||+.-+|=||++.+++.|.+ +..|+.++..||- .-|... ||-.|.+.
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~-~lGI~~~GhRkkIl~ 66 (88)
T 2e8n_A 14 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVK-RIGVRLPGHQKRIAY 66 (88)
T ss_dssp SHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHH-HTTCCSHHHHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHH-HCCCCChhHHHHHHH
Confidence 466799999999999999999999 9999999999995 689987 99887763
No 233
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=88.77 E-value=0.31 Score=42.78 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=24.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
++|++|+.|=.+|||+|+.....|.++..++
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKL 54 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhC
Confidence 5778888888999999999988876655444
No 234
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=88.45 E-value=0.12 Score=41.34 Aligned_cols=50 Identities=26% Similarity=0.500 Sum_probs=44.9
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-ccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFK 105 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~ 105 (416)
.+..||..-+|=||.+.+++.|.+ +..|..++..|| .+.|... ||-.|.+
T Consensus 25 ~V~~WL~~lgL~qY~~~F~~~g~~s~e~l~~lt~~DL-~~lGIt~~GHRkkIL 76 (82)
T 3hil_A 25 TVSEWLESIRMKRYILHFHSAGLDTMECVLELTAEDL-TQMGITLPGHQKRIL 76 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSGGGGTTCCHHHH-HHTTCCCHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHcCCChHHHHhcCCHHHH-HHCCCCCHHHHHHHH
Confidence 577899999999999999999998 999999999999 7889886 9977654
No 235
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=88.30 E-value=0.19 Score=39.61 Aligned_cols=44 Identities=18% Similarity=0.379 Sum_probs=39.5
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
+++||+-.-=|....+.|.+.|+|++.+++-|+.+|+..|+.|.
T Consensus 14 ~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~lt~~DL~~lGI~~ 57 (78)
T 1v38_A 14 TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIAD 57 (78)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHTTTCC
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhcCHHHHHHcCCCC
Confidence 57777777778888999999999999999999999999999884
No 236
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=88.10 E-value=0.13 Score=40.33 Aligned_cols=51 Identities=16% Similarity=0.245 Sum_probs=44.7
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhcccccccccccc
Q 014901 54 LEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKRGHMARFK 105 (416)
Q Consensus 54 ~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~~~h~~~f~ 105 (416)
-.+..||..-||-+|++.++..|.++..|..++..|| .+.|..-||--+-+
T Consensus 3 ~~v~~wL~~lgL~~Y~~~F~~~~id~e~l~~lt~~DL-~~lGI~~G~RkkIl 53 (74)
T 3k1r_B 3 SPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDL-RSISVPLGPREKIL 53 (74)
T ss_dssp CHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTCCHHHH-HHTTCCHHHHHHHH
T ss_pred chHHHHHHHCCCHHHHHHHHHcCcCHHHHhHCCHHHH-HHcCCCcchHHHHH
Confidence 3578899999999999999999999999999999999 57888888865543
No 237
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=88.07 E-value=0.72 Score=49.38 Aligned_cols=66 Identities=9% Similarity=-0.042 Sum_probs=43.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
++++||.|+ -.||+.|+.....|.++..+++. ++.++.|-.+......+.|.-..+|--++...++
T Consensus 675 ~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 740 (780)
T 3apo_A 675 KTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYER 740 (780)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEET
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCC
Confidence 456777776 79999999999988887777754 5788888765544323444334555555543333
No 238
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=88.04 E-value=0.18 Score=41.78 Aligned_cols=24 Identities=21% Similarity=0.396 Sum_probs=16.5
Q ss_pred chhhccCCCEEEEeecCCCCcchHHH
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAE 265 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~e 265 (416)
+.++++..++++ |-..|||+|+..
T Consensus 18 ~~~~i~~~~Vvv--f~~~~Cp~C~~a 41 (118)
T 3c1r_A 18 VKDLIAENEIFV--ASKTYCPYCHAA 41 (118)
T ss_dssp HHHHHHHSSEEE--EECSSCHHHHHH
T ss_pred HHHHHccCcEEE--EEcCCCcCHHHH
Confidence 456666555433 556999999986
No 239
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=87.99 E-value=0.74 Score=48.04 Aligned_cols=67 Identities=12% Similarity=-0.045 Sum_probs=45.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhh--cCCeEEEEecCC--hhhHHhhhcCCCCCceeeecc
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA--LGIQLFAVLHEY--IESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a--lGV~LVaIspEs--~~~~ik~F~~~~l~f~VLsDp 311 (416)
+.+..||+.|--.||+.|+.....|.++..++.. .++.++.|-.+. .....+.|.-..+|--++.++
T Consensus 28 ~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 28 GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcC
Confidence 3334555555578999999999999998888875 368888888643 222234443356666677775
No 240
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=87.64 E-value=0.17 Score=39.97 Aligned_cols=52 Identities=35% Similarity=0.529 Sum_probs=45.3
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhccc-cccccccccc
Q 014901 54 LEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGM-KRGHMARFKD 106 (416)
Q Consensus 54 ~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m-~~~h~~~f~~ 106 (416)
-++..||..-||=+|++.++..+.+-.+|+.++..||- +.|+ +-||.-+.+.
T Consensus 13 ~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~Lt~~dL~-~lGI~~~ghr~kIl~ 65 (81)
T 3bq7_A 13 EEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHLERRDLK-DLGVTKVGHMKRILC 65 (81)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHH-HTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHcCCCHHHHCcCCHHHHh-HcCCCCHHHHHHHHH
Confidence 35677999999999999999999999999999999995 5999 5688777653
No 241
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=87.63 E-value=0.14 Score=41.69 Aligned_cols=50 Identities=24% Similarity=0.504 Sum_probs=44.9
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhccccc-ccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFK 105 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~-~l~~l~~~~~~~l~~~~~m~~-~h~~~f~ 105 (416)
++..||+.-+|=||.+.+++.|. ++..|..++..||- +-|... ||-.|.+
T Consensus 28 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~-~lGI~~~GhrkkIl 79 (94)
T 1b0x_A 28 SVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLA-RIGITAITHQNKIL 79 (94)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHH-HHTCCCHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHH-HCCCCChhHHHHHH
Confidence 56779999999999999999999 89999999999995 689887 9987765
No 242
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=87.59 E-value=0.5 Score=45.40 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=39.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhc-CCeEEEEecCChhhHHhhhcCCCCCceeeeccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDAL-GIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~al-GV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~ 312 (416)
.++.+++.|--.||+.|+.....|.++..+++.. ++.++.|-..... ...|.-..+|--++.+.+
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~ 331 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPAS 331 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSS
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECC
Confidence 3444444555799999999999998887777654 4555555433221 233332456655666444
No 243
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=87.47 E-value=0.48 Score=35.55 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=23.6
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
|++|-..|||+|+.....|.++..+. .|+.++.|-
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--~~i~~~~vd 37 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--DDFQYQYVD 37 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--SSCEEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEEEEe
Confidence 34456789999999887777654332 467766654
No 244
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=87.39 E-value=0.14 Score=39.48 Aligned_cols=50 Identities=30% Similarity=0.381 Sum_probs=44.7
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhcccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 105 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~ 105 (416)
++..||..-||=+|++.+...+.+-..|+.++..|| .+.|++ -||..+.+
T Consensus 11 ~V~~WL~~~gl~~y~~~F~~~~i~g~~Ll~l~~~dL-~~lGI~~~g~r~kil 61 (74)
T 2gle_A 11 QVSHWLVGLSLDQYVSEFSAQNISGEQLLQLDGNKL-KALGMTSSQDRALVK 61 (74)
T ss_dssp GGHHHHHHTTTHHHHHHHTTTTCCHHHHHTCCHHHH-HTTTCCCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCHHHHhhCCHHHH-HHcCCCCHHHHHHHH
Confidence 567899999999999999999999999999999998 579998 78977765
No 245
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=87.20 E-value=0.46 Score=44.04 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
+.|++|+.|--+|||||+.....|.+... +-+++++.+
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~---~g~v~v~~~ 133 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVD---SGKVQLRTL 133 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHH---TTSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHh---CCcEEEEEE
Confidence 56888888899999999999888876432 224666544
No 246
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=87.19 E-value=0.94 Score=33.75 Aligned_cols=32 Identities=16% Similarity=0.373 Sum_probs=21.6
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 289 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE 289 (416)
|++|-..|||+|+.....|.+ .|+.+..|--+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RGFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CCCCeEEEECC
Confidence 345667899999987665543 56776666543
No 247
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=87.02 E-value=0.45 Score=35.92 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=21.4
Q ss_pred EeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 252 LCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 252 vFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
.+|-..|||+|+.....|.++..+ .|+.+..+
T Consensus 5 ~~f~~~~C~~C~~~~~~l~~~~~~---~~~~~~~~ 36 (80)
T 2k8s_A 5 AIFYHAGCPVCVSAEQAVANAIDP---SKYTVEIV 36 (80)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCT---TTEEEEEE
T ss_pred EEEeCCCCCchHHHHHHHHHHHHh---cCCeEEEE
Confidence 344468999999999888776543 35554333
No 248
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=85.65 E-value=0.58 Score=40.71 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=27.4
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
++++.|+.|=.++||+|......|.++..+... .+.++.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~ 63 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLV 63 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEe
Confidence 456777777899999999998888765544322 3444433
No 249
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=85.64 E-value=0.51 Score=37.19 Aligned_cols=31 Identities=16% Similarity=0.327 Sum_probs=20.2
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
+.+++...++ ++ |-..|||+|+.....|.+.
T Consensus 5 ~~~~i~~~~v-~~-f~~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 5 VNSKIQPGKV-VV-FIKPTCPFCRKTQELLSQL 35 (105)
T ss_dssp HHHHCCTTCE-EE-EECSSCHHHHHHHHHHHHS
T ss_pred HHhhcccCCE-EE-EEcCCCHhHHHHHHHHHHc
Confidence 3455666553 33 4469999999876666553
No 250
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=85.31 E-value=1.5 Score=31.90 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=21.4
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 289 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE 289 (416)
|.+|-..|||+|+.....|.+ .|+....|--+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~-------~~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDR-------AGLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCCcEEEECC
Confidence 345667899999987666654 46666555433
No 251
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=85.21 E-value=0.48 Score=40.18 Aligned_cols=27 Identities=22% Similarity=0.577 Sum_probs=18.7
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccc
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKP 274 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~p 274 (416)
+++||.|+. .||++|+..-..+...++
T Consensus 19 ~~~LV~F~A-~wC~~Ck~~~~~i~~~~~ 45 (116)
T 3dml_A 19 ELRLLMFEQ-PGCLYCARWDAEIAPQYP 45 (116)
T ss_dssp CEEEEEEEC-TTCHHHHHHHHHTTTTGG
T ss_pred CCEEEEEEC-CCCHHHHHHHHHHHhhHH
Confidence 456666664 699999988766554443
No 252
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=85.00 E-value=0.54 Score=37.59 Aligned_cols=44 Identities=16% Similarity=0.310 Sum_probs=39.3
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++++|+-.-=|....+.|.+.|||++..++.|+.+|+..|+.|.
T Consensus 25 ~V~~WL~~lgL~qY~~~F~~~g~~s~e~l~~lt~~DL~~lGIt~ 68 (82)
T 3hil_A 25 TVSEWLESIRMKRYILHFHSAGLDTMECVLELTAEDLTQMGITL 68 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSGGGGTTCCHHHHHHTTCCC
T ss_pred HHHHHHHhCCHHHHHHHHHHcCCChHHHHhcCCHHHHHHCCCCC
Confidence 67788777778888999999999999999999999999998874
No 253
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=84.96 E-value=0.51 Score=40.02 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=27.8
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccc
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKP 274 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~p 274 (416)
+.++++..+.||+|+.-.|||.|+.....|.+...
T Consensus 17 f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~ 51 (112)
T 3iv4_A 17 FEQVIEENKYVFVLKHSETCPISANAYDQFNKFLY 51 (112)
T ss_dssp HHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhc
Confidence 55666656678888899999999999888887543
No 254
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=84.80 E-value=0.25 Score=40.21 Aligned_cols=51 Identities=22% Similarity=0.471 Sum_probs=44.7
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
.+..||..-+|-||.+.++..|.+ +..|..++..|| .+.|... ||-.|.+.
T Consensus 27 ~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL-~~lGIt~~GHRkkIL~ 79 (90)
T 3h8m_A 27 SVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDV-MSLGITLVGHQKKIMS 79 (90)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHH-HHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHH-HHCCCCCHHHHHHHHH
Confidence 467899999999999999999999 999999999999 4689886 99777653
No 255
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=84.61 E-value=0.79 Score=40.79 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=25.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhh
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDA 278 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~a 278 (416)
.++++|+.|--+|||+|+.....|.++..++..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~ 55 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD 55 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC
Confidence 357788888899999999998888776555433
No 256
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=84.46 E-value=1.5 Score=46.94 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=45.9
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeecc
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQ 311 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp 311 (416)
+.++ .+++++|.|| -.||+.|+..+..|.++..+++. .+.++.|..+......+.|.-..+|--++.+.
T Consensus 450 ~~~~-~~~~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~ 518 (780)
T 3apo_A 450 FPAS-DKEPWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQ 518 (780)
T ss_dssp SCTT-CCSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred HHHc-CCCeEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcC
Confidence 3444 5667777666 47999999999999998888764 58888888765443344443344554444443
No 257
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=84.45 E-value=1.2 Score=38.34 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=22.2
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~~ 272 (416)
+.++.+..++ ++|..+ .|||||+....-|.+.
T Consensus 28 v~~~i~~~~V-vvy~ks~~~~~~Cp~C~~ak~~L~~~ 63 (135)
T 2wci_A 28 IQRQIAENPI-LLYMKGSPKLPSCGFSAQAVQALAAC 63 (135)
T ss_dssp HHHHHHHCSE-EEEESBCSSSBSSHHHHHHHHHHHTT
T ss_pred HHHHhccCCE-EEEEEecCCCCCCccHHHHHHHHHHc
Confidence 4556666665 446665 8999999877776553
No 258
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=84.35 E-value=0.42 Score=39.18 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=21.6
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
+.++.+..+++| |-..|||+|+....-|.+.
T Consensus 10 ~~~~i~~~~v~v--y~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 10 LVGLIERSRVVI--FSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp HHHHHHHCSEEE--EECTTCHHHHHHHHHHHHT
T ss_pred HHHHhccCCEEE--EEcCCCCcHHHHHHHHHHc
Confidence 456666667554 5568999999777666653
No 259
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=84.25 E-value=0.36 Score=37.62 Aligned_cols=51 Identities=24% Similarity=0.384 Sum_probs=43.5
Q ss_pred HHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhcccc-cccccccc
Q 014901 54 LEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 105 (416)
Q Consensus 54 ~~~r~~l~~~--~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~ 105 (416)
-++..||..- ||=+|++.+...+++-..|+.++..|| .+.|++ -||-.+.+
T Consensus 10 ~~V~~WL~~l~~gl~~Y~~~F~~~~i~G~~Ll~L~~~dL-~~lGI~~~ghr~~il 63 (80)
T 3bs5_B 10 SQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQEL-EDLGVSRIGHQELIL 63 (80)
T ss_dssp HHHHHHHHTSCGGGGGGHHHHHHHTCCHHHHHTCCHHHH-HHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHcCCCHHHHHHCCHHHH-HHcCCCCHHHHHHHH
Confidence 3566788766 799999999999999999999999999 679995 59977664
No 260
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=83.95 E-value=0.44 Score=38.52 Aligned_cols=30 Identities=13% Similarity=0.211 Sum_probs=20.1
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~ 271 (416)
+.++.+..++++ |-..|||+|+....-|.+
T Consensus 12 ~~~~i~~~~v~v--y~~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 12 IRKTVTENTVVI--YSKTWCSYCTEVKTLFKR 41 (113)
T ss_dssp HHHHHHHSSEEE--EECTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCEEE--EECCCChhHHHHHHHHHH
Confidence 355566667433 556899999977666654
No 261
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=83.91 E-value=0.57 Score=39.33 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=23.8
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~~ 272 (416)
+.++++..++ ++|-.+ +|||||+....-|.+.
T Consensus 9 v~~~i~~~~V-vvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 9 IEDAIESAPV-VLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp HHHHHHSCSE-EEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred HHHHhccCCE-EEEEeccCCCCCCccHHHHHHHHHHc
Confidence 4667777774 566776 6999999887777663
No 262
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=83.81 E-value=1.9 Score=36.48 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=44.3
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ec--CChhhHHhhhcC-CCCCceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LH--EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--sp--Es~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+||+|+....-|.+ .|+....| .. .+.+ .++.+.. .+.+..-+.......|+.+|+.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~-el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSID-EIKQILRMTEDGTDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHH-HHHHHHHTCSSCGGGTBCTTSHHHHHHCCC
T ss_pred EEEEeCCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHH-HHHHHHHHcCCCHHHhhcCCchHHHhcCcc
Confidence 567889999999987776665 46665444 32 2223 3555543 4566777889999999999985
No 263
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=83.66 E-value=0.52 Score=37.15 Aligned_cols=44 Identities=11% Similarity=0.214 Sum_probs=39.8
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.+|+-.-=|..-.+.|.++|++|.-.+.-|+.+|+..|+.|.
T Consensus 13 ~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~ 56 (82)
T 1b4f_A 13 TVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTL 56 (82)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhCCHHHHHHcCCCC
Confidence 78888877778888999999999999999999999999998874
No 264
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=83.55 E-value=1.1 Score=37.28 Aligned_cols=38 Identities=13% Similarity=0.168 Sum_probs=26.9
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 248 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 248 pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
++||. |-..||+.|+.....|.++..++. +++++-|-.
T Consensus 25 ~vvv~-F~a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~ 62 (118)
T 3evi_A 25 WVIIH-LYRSSIPMCLLVNQHLSLLARKFP--ETKFVKAIV 62 (118)
T ss_dssp EEEEE-EECTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEG
T ss_pred eEEEE-EeCCCChHHHHHHHHHHHHHHHCC--CCEEEEEEh
Confidence 45554 457999999999888887766553 467766653
No 265
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=83.51 E-value=0.43 Score=42.37 Aligned_cols=30 Identities=17% Similarity=0.093 Sum_probs=22.8
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
++++||.|+ .+|||+|+.....|.++..++
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh
Confidence 467777776 799999999877776665555
No 266
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=83.34 E-value=0.71 Score=37.69 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=23.6
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~~ 272 (416)
+.++.+..++ ++|-.+ +|||||+....-|.+.
T Consensus 11 v~~~i~~~~V-vvy~k~t~~~p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 11 LEKLVNSEKV-VLFMKGTRDFPMCGFSNTVVQILKNL 46 (109)
T ss_dssp HHHHHTSSSE-EEEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHccCCE-EEEEecCCCCCCChhHHHHHHHHHHc
Confidence 4567777775 557776 6999999987777664
No 267
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=83.29 E-value=1.1 Score=38.82 Aligned_cols=36 Identities=11% Similarity=0.391 Sum_probs=27.9
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
.+.+++|+.|=.++||||+.....|.++ -.++++.+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l------~~v~v~~~ 47 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM------TDVTVYSF 47 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC------CSEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc------CceEEEEE
Confidence 5678888889999999999998888654 23566554
No 268
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=83.05 E-value=2.6 Score=38.15 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=25.6
Q ss_pred CCCEEEEeec------CCCCcchHHHHHHHHhccchhh
Q 014901 246 ESPAVLLCIR------RPGCIMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 246 ~~pvVLvFyR------g~gCP~Cn~el~~Ls~~~peL~ 277 (416)
+.++||.|.- +.||..|+...-.|.++..++.
T Consensus 37 ~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~ 74 (178)
T 3ga4_A 37 GYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIR 74 (178)
T ss_dssp TCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhh
Confidence 3467787776 3699999999999988887775
No 269
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=82.81 E-value=0.53 Score=39.60 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=25.6
Q ss_pred ceechhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 014901 237 PMKALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 272 (416)
Q Consensus 237 ~VsLsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~~ 272 (416)
.-.+.++++..++ ++|-+. +|||||+.-.+-|.+.
T Consensus 10 ~~~v~~~i~~~~V-vvfsk~t~~~p~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 10 AEQLDALVKKDKV-VVFLKGTPEQPQCGFSNAVVQILRLH 48 (118)
T ss_dssp HHHHHHHHHHSSE-EEEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCE-EEEEecCCCCCccHHHHHHHHHHHHc
Confidence 3446778888775 557776 6999999877777653
No 270
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=82.81 E-value=1.3 Score=37.24 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=44.1
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCC-CceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYW-GGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--s--pEs~~~~ik~F~~-~~l-~f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+|++|+...+-|.+ .|+..-.| . |.+.+ .++.+.. .++ +..=+.......|+.+|+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLETPPSVD-KLKELLQQLGFSDARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTSCCCHH-HHHHHHHHTTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccCCCcHH-HHHHHHHhcCCcCHHHHhcCCChhhhhcCcc
Confidence 678999999999998877765 44443333 3 23333 3566554 455 4444888999999999986
No 271
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=82.76 E-value=0.8 Score=38.44 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=45.9
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--s--pEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+||+|+....-|.+ .|+....| . +.+.+ .++.+.. .+.+..-+.......|+.+|+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-el~~~l~~~~~~~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR-------HDVVFQEHNIMTSPLSRD-ELLKILSYTENGTEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHH-HHHHHHHHCSSTHHHHBCTTCHHHHHTTCC
T ss_pred EEEEeCCCCHHHHHHHHHHHH-------cCCCeEEEecccCCCcHH-HHHHHHhhcCCCHHHhhcCCcHHHHHcCCC
Confidence 678999999999988777654 45655444 2 33333 3666554 4667777888999999999985
No 272
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=82.72 E-value=0.62 Score=36.77 Aligned_cols=44 Identities=18% Similarity=0.296 Sum_probs=39.1
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.+|+-.-=|..-.+.|.++|+|+.-.+.-|+.+|+..|..|.
T Consensus 9 ~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~lt~~DL~~lGI~~ 52 (81)
T 1ucv_A 9 TVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITL 52 (81)
T ss_dssp BHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCC
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHHcCHHHHHhCCCCC
Confidence 78888888778888999999999999999999999999887763
No 273
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=82.54 E-value=0.8 Score=37.79 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=23.2
Q ss_pred chhhccCCCEEEEeecC----CCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRR----PGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~~ 272 (416)
+.++++..|+| +|.+| .|||||+....-|.+.
T Consensus 9 v~~~i~~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~ 44 (111)
T 3zyw_A 9 LKKLTHAAPCM-LFMKGTPQEPRCGFSKQMVEILHKH 44 (111)
T ss_dssp HHHHHTSSSEE-EEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHhcCCEE-EEEecCCCCCcchhHHHHHHHHHHc
Confidence 46777887765 45553 8999999887777653
No 274
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.31 E-value=0.37 Score=40.50 Aligned_cols=30 Identities=13% Similarity=0.300 Sum_probs=20.6
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~ 271 (416)
+.+++...+++| |-..|||+|+.....|.+
T Consensus 20 ~~~~i~~~~vvv--f~~~~Cp~C~~~~~~L~~ 49 (130)
T 2cq9_A 20 IQETISDNCVVI--FSKTSCSYCTMAKKLFHD 49 (130)
T ss_dssp HHHHHHHSSEEE--EECSSCSHHHHHHHHHHH
T ss_pred HHHHHcCCcEEE--EEcCCChHHHHHHHHHHH
Confidence 455566666554 556999999987666654
No 275
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=81.86 E-value=2.4 Score=37.11 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=38.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHh---ccchhhhcCCeEEEEecCChhh--HHhhhcCCCCCceeeeccc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYA---KKPIFDALGIQLFAVLHEYIES--EVKDFWPRYWGGVVVYDQG 312 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~---~~peL~alGV~LVaIspEs~~~--~ik~F~~~~l~f~VLsDp~ 312 (416)
++|++|.|+ ..||+.|+..-++.-. ....+.+ +.-+|-|-.++.+. ..+.|.-..+|+-++.|++
T Consensus 42 ~K~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~ 111 (153)
T 2dlx_A 42 NKWLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPR 111 (153)
T ss_dssp TCEEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTT
T ss_pred CCeEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCC
Confidence 456555554 5799999998877633 2223322 44455555555432 1233433678888999997
No 276
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=81.80 E-value=0.55 Score=37.89 Aligned_cols=44 Identities=9% Similarity=0.303 Sum_probs=38.6
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.+|+-.-=|....+.|.+.|||++..+..|+.+|+..|+.|.
T Consensus 23 ~V~~WL~~lgL~qY~~~F~~~g~d~le~l~~lt~~DL~~LGIt~ 66 (86)
T 3kka_C 23 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRL 66 (86)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCC
T ss_pred HHHHHHHhCCcHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCC
Confidence 56777766668888999999999999999999999999998875
No 277
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=81.71 E-value=0.43 Score=41.70 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=23.0
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
+++++|+.|=-+|||+|......|.++..+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 51 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKAL 51 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHC
Confidence 4567777777999999998877776554433
No 278
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=81.59 E-value=2.1 Score=31.63 Aligned_cols=20 Identities=15% Similarity=0.283 Sum_probs=14.7
Q ss_pred EeecCCCCcchHHHHHHHHh
Q 014901 252 LCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 252 vFyRg~gCP~Cn~el~~Ls~ 271 (416)
.+|-..|||+|+.....|.+
T Consensus 4 ~~y~~~~C~~C~~~~~~l~~ 23 (82)
T 1fov_A 4 EIYTKETCPYCHRAKALLSS 23 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHH
Confidence 34557899999987766654
No 279
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.49 E-value=0.41 Score=39.27 Aligned_cols=51 Identities=24% Similarity=0.486 Sum_probs=45.0
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
++..||+.-+|-||++.+++.|.+ +..|+.++..||- +.|+.. ||-.|.+.
T Consensus 24 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~lt~~DL~-~lGI~~~GhRkkIl~ 76 (99)
T 2eao_A 24 TVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLL-RIGITLAGHQKKILN 76 (99)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCChHHHHhhCCHHHHH-HCCCCChhHHHHHHH
Confidence 466799999999999999999999 9999999999996 589986 99877653
No 280
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=81.40 E-value=0.57 Score=38.09 Aligned_cols=44 Identities=11% Similarity=0.280 Sum_probs=39.0
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++++|+-.-=|....+.|.+.|||++-.+..|+.+|+..|+.|.
T Consensus 27 ~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~lGIt~ 70 (90)
T 3h8m_A 27 SVGEWLQAIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITL 70 (90)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCC
T ss_pred HHHHHHHHCChHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCC
Confidence 57788776668888999999999999999999999999998874
No 281
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=81.19 E-value=0.51 Score=38.09 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=50.0
Q ss_pred hhhHHHHhhhccchhh--hhhhHHHHHcCCChHHHhccCcccch-hhcccc-ccccccccc
Q 014901 50 QKDALEIRSYLHDRAL--MQYADIFEASGKSLPELLNLSTGDLS-SQFGMK-RGHMARFKD 106 (416)
Q Consensus 50 ~~~~~~~r~~l~~~~l--~~y~~~~e~~~~~l~~l~~~~~~~l~-~~~~m~-~~h~~~f~~ 106 (416)
+-..=++..||+..|+ =+|++.+....++-.-|+.+...||. ..+|+. -||.-+++.
T Consensus 19 ~Wt~~dV~~WL~~~gl~~~~Y~~~F~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~ 79 (91)
T 1v85_A 19 KWTTEEVVLWLEQLGPWASLYRDRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILT 79 (91)
T ss_dssp GCCHHHHHHHHHHHCGGGHHHHHHHHHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHH
Confidence 3455678899999999 99999999999999999999999999 689987 499888864
No 282
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.08 E-value=0.67 Score=37.12 Aligned_cols=44 Identities=9% Similarity=0.296 Sum_probs=39.3
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.+|+-.-=|....+.|.++|+|++-.+.-|+.+|++.|..|.
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~ 57 (88)
T 2e8n_A 14 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRL 57 (88)
T ss_dssp SHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTSCTTHHHHTTCCS
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCC
Confidence 67888877778888999999999999999999999999988774
No 283
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=80.83 E-value=0.54 Score=37.92 Aligned_cols=52 Identities=21% Similarity=0.514 Sum_probs=45.5
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-cccccccc
Q 014901 54 LEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 54 ~~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
-.+..||..-+|=||.+.++..|.+ +..|..++..||- +.|... ||-.|.+.
T Consensus 22 ~~V~~WL~~lgL~qY~~~F~~~g~d~le~l~~lt~~DL~-~LGIt~~GHRkkIL~ 75 (86)
T 3kka_C 22 RTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIK-RIGVRLPGHQKRIAY 75 (86)
T ss_dssp -CHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTCCHHHHH-HTTCCCHHHHHHHHH
T ss_pred hHHHHHHHhCCcHHHHHHHHHcCCChHHHHHhCCHHHHH-HCCCCCHHHHHHHHH
Confidence 3578899999999999999999998 9999999999995 688887 99877664
No 284
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.60 E-value=2.3 Score=43.57 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=37.3
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCc
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGG 305 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f 305 (416)
++++.|.+|--.|||+|+..+..|.+...+.. ++.+..|-.+......+.|.-...|-
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~~~~~~~~~i~svPt 173 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTFQNEITERNVMGVPA 173 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhhHHHHHHhCCCccCE
Confidence 45777888888999999999888877644432 57777776544433334443234443
No 285
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=80.45 E-value=0.99 Score=38.02 Aligned_cols=64 Identities=19% Similarity=0.315 Sum_probs=45.4
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEE--Ee--cCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFA--VL--HEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVa--Is--pEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+|++|+...+-|.+ .|+..-. |. |.+.+ .+..+.. .+++..-+.......|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE-------NNIEYTNRLIVDDNPTVE-ELKAWIPLSGLPVKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-------TTCCCEEEETTTTCCCHH-HHHHHHHHHTSCGGGGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEecccCcCCHH-HHHHHHHHcCCCHHHeEeCCCchhhhcCcc
Confidence 678999999999998877765 4554433 33 33333 3566554 4667778888999999999985
No 286
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=80.21 E-value=0.58 Score=38.78 Aligned_cols=53 Identities=32% Similarity=0.466 Sum_probs=46.9
Q ss_pred HHHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhccccc-ccccccccc
Q 014901 54 LEIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMKR-GHMARFKDR 107 (416)
Q Consensus 54 ~~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~~-~h~~~f~~~ 107 (416)
-++..||..-+|=||++.+++.|.+ +..|+.++..||- +-|+.. ||-.|.+..
T Consensus 27 ~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~Lt~eDLk-eLGIt~~GhRkkIL~a 81 (100)
T 2kg5_A 27 LDIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELK-QLGISATGHRKRILRL 81 (100)
T ss_dssp CBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTCCHHHHH-HHTCCCHHHHHHHHHH
T ss_pred ChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhcCHHHHH-HCCCCChhHHHHHHHH
Confidence 3578999999999999999999999 9999999999996 589885 998887743
No 287
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=79.93 E-value=0.49 Score=41.05 Aligned_cols=30 Identities=13% Similarity=0.300 Sum_probs=20.7
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~ 271 (416)
+.+++.+.+++| |-..|||+|+.....|.+
T Consensus 42 ~~~~i~~~~Vvv--f~~~~Cp~C~~~k~~L~~ 71 (146)
T 2ht9_A 42 IQETISDNCVVI--FSKTSCSYCTMAKKLFHD 71 (146)
T ss_dssp HHHHHHHCSEEE--EECTTCHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEE--EECCCChhHHHHHHHHHH
Confidence 456666666555 556999999987666654
No 288
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=79.52 E-value=2.9 Score=31.92 Aligned_cols=21 Identities=29% Similarity=0.618 Sum_probs=15.4
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 014901 251 LLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~ 271 (416)
|.+|-..|||+|+.....|.+
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~ 28 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLAR 28 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 445667899999987666654
No 289
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=79.42 E-value=0.95 Score=34.71 Aligned_cols=21 Identities=24% Similarity=0.591 Sum_probs=15.7
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 014901 251 LLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~ 271 (416)
|++|-..|||+|+.....|.+
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~ 28 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDK 28 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 455677999999987666554
No 290
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=79.30 E-value=1.7 Score=37.03 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=25.2
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
..|+|+-|+ -+.||+|...-..+.++..++.. ++.++-+
T Consensus 21 ~~~~vvEf~-dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFF-SFYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CCCEEEEEE-CCCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 467888877 79999999876666554444332 3444433
No 291
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=79.11 E-value=3.1 Score=37.05 Aligned_cols=45 Identities=9% Similarity=-0.060 Sum_probs=27.3
Q ss_pred CCCEEEEeecC----CCCcchHHHHHHHHhccchhhh-cCCeEEEEecCC
Q 014901 246 ESPAVLLCIRR----PGCIMCRAEAHQLYAKKPIFDA-LGIQLFAVLHEY 290 (416)
Q Consensus 246 ~~pvVLvFyRg----~gCP~Cn~el~~Ls~~~peL~a-lGV~LVaIspEs 290 (416)
++|++|.||-. +||+.|+..+..+.++..++.. -.++++.|-.+.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~ 69 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT 69 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc
Confidence 57888888844 4666667777777666444321 236666665443
No 292
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=79.08 E-value=1.3 Score=36.77 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=23.8
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 250 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 250 VLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
+|+.|-..|||+|+....-|.++..+ .|+.+.-|=
T Consensus 31 ~vv~y~~~~C~~C~~a~~~L~~l~~e---~~i~~~~vD 65 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMIASLRVLQKK---SWFELEVIN 65 (107)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHH---SCCCCEEEE
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHh---cCCeEEEEE
Confidence 35556678999999888887765433 356655554
No 293
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=79.02 E-value=0.97 Score=36.67 Aligned_cols=44 Identities=14% Similarity=0.289 Sum_probs=39.5
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++++|+-.-=|....+.|.++|++|+-.+.-|+.+|+..|..|.
T Consensus 28 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~ 71 (94)
T 1b0x_A 28 SVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITA 71 (94)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCC
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhCCHHHHHHCCCCC
Confidence 67888877778889999999999999999999999999998774
No 294
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=78.94 E-value=0.98 Score=40.86 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=24.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~L---s~~~peL~alGV~LVaI 286 (416)
.+++||-||= +|||+|+...-.| .++...+.. ++.++-+
T Consensus 113 ~~~~vveFf~-~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~ 154 (197)
T 1un2_A 113 GAPQVLEFFS-FFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKY 154 (197)
T ss_dssp TCCSEEEEEC-TTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEE
T ss_pred CCCEEEEEEC-CCChhHHHhCcccccHHHHHHHCCC-CCEEEEe
Confidence 4577777776 9999999988655 444444422 4554433
No 295
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=78.47 E-value=1.8 Score=36.41 Aligned_cols=64 Identities=22% Similarity=0.280 Sum_probs=45.2
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCCC-ceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYWG-GVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--s--pEs~~~~ik~F~~-~~l~-f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+|++|+...+-|.+ .|+..-.| . |.+.+ .++.+.. .+++ ..-+.......|+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~t~~-eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~ 75 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-------QGIAPQVIKYLETSPSVE-ELKRLYQQLGLNEVRAMMRCKEELYKELNLG 75 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECHHHHCCCHH-HHHHHHHHHTCSSGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCceEEEEeccCcCcHH-HHHHHHHHcCCccHHHHhcCCCchhhhcCcc
Confidence 678999999999998877765 45544333 2 33434 3666654 4555 556888999999999986
No 296
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=77.44 E-value=1.4 Score=33.20 Aligned_cols=21 Identities=19% Similarity=0.320 Sum_probs=15.6
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 014901 251 LLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~ 271 (416)
|.+|-..|||+|+....-|.+
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHH
Confidence 666777899999986655543
No 297
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=77.08 E-value=0.67 Score=39.22 Aligned_cols=30 Identities=13% Similarity=0.306 Sum_probs=18.7
Q ss_pred chhhccCCCEEEEeecCCCCcchHHH-HHHHHh
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAE-AHQLYA 271 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~e-l~~Ls~ 271 (416)
+.+++...++ + +|-..|||||+.. ..-|.+
T Consensus 30 v~~~i~~~~V-v-vy~~~~Cp~C~~a~k~~L~~ 60 (129)
T 3ctg_A 30 VKDLIGQKEV-F-VAAKTYCPYCKATLSTLFQE 60 (129)
T ss_dssp HHHHHHHSSE-E-EEECTTCHHHHHHHHHHHTT
T ss_pred HHHHHcCCCE-E-EEECCCCCchHHHHHHHHHh
Confidence 4555665563 3 3456999999977 444433
No 298
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=76.97 E-value=1.6 Score=36.66 Aligned_cols=65 Identities=17% Similarity=0.231 Sum_probs=46.3
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--e--cCChhhHHhhhcC-CCCCceeeeccchHHHHHhCCC
Q 014901 250 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--L--HEYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 250 VLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--s--pEs~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~ 322 (416)
.|.+|-..+|++|+...+-|.+ .|+..-.| . |.+.+ .+..+.. .+++..-+.+.....|+.+|+.
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~-------~gi~~~~~di~~~~~~~~-eL~~~l~~~g~~~~~l~n~~~~~~k~l~l~ 73 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDD-------LAWDYDAIDIKKNPPAAS-LIRNWLENSGLELKKFFNTSGQSYRALGLK 73 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHH-------HTCCEEEEETTTSCCCHH-HHHHHHHHSCCCGGGGBCTTSHHHHHTTHH
T ss_pred eEEEEeCCCChHHHHHHHHHHH-------cCCceEEEEeccCchhHH-HHHHHHHHcCCCHHHHhCCCCcchhhcCcc
Confidence 4788999999999988777654 45554444 3 23333 3666654 5666777889999999999985
No 299
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=76.72 E-value=0.95 Score=37.72 Aligned_cols=54 Identities=13% Similarity=0.278 Sum_probs=45.8
Q ss_pred hHHHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhcccc-ccccccccc
Q 014901 52 DALEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 52 ~~~~~r~~l~~~--~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
..-+.-.||... |+-+|++.+...+++=..|+.++..+| .+.|++ -||.-+++.
T Consensus 27 t~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL-k~LGI~~~GhR~kIl~ 83 (106)
T 3bs5_A 27 TVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSL-QRMGVTDNRDREAIWR 83 (106)
T ss_dssp CHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhCCHHHH-HhcCCCCHHHHHHHHH
Confidence 344677899877 999999999999999999999999999 579996 488777653
No 300
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.58 E-value=0.96 Score=35.54 Aligned_cols=50 Identities=24% Similarity=0.406 Sum_probs=42.7
Q ss_pred HHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhcccc-cccccccc
Q 014901 55 EIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFK 105 (416)
Q Consensus 55 ~~r~~l~~~--~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~ 105 (416)
++..||..- ||=+|++.+...+++-..|+.++..|| .+.|++ -||-.+.+
T Consensus 15 ~V~~WL~~l~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL-~~LGI~~~ghr~~il 67 (83)
T 2ean_A 15 QVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQEL-EDLGVSRIGHQELIL 67 (83)
T ss_dssp HHHHHHTTSCGGGTTTHHHHHHHTCCHHHHTTCCHHHH-HHHTCCCSHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHCCCCHHHHhhCCHHHH-HHhCCCCHHHHHHHH
Confidence 566788765 688999999999999999999999999 679995 58877664
No 301
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=76.47 E-value=0.88 Score=36.91 Aligned_cols=53 Identities=21% Similarity=0.339 Sum_probs=45.2
Q ss_pred HHHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhccccccccccccc
Q 014901 54 LEIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKRGHMARFKD 106 (416)
Q Consensus 54 ~~~r~~l~~~--~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~~~h~~~f~~ 106 (416)
=+.-.||... |+-+||+.+....++=.-|+.++..||-+..|||-||+-+...
T Consensus 20 edV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~~dl~~~mgiklGpalKi~~ 74 (89)
T 1pk1_B 20 EEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSERMMKYMGLKLGPALKICN 74 (89)
T ss_dssp HHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCHHHHHHccCCCccHHHHHHH
Confidence 3556777644 8889999999999999999999999999999999999876543
No 302
>2k6l_A Putative uncharacterized protein; xanthonomas axonopodis, RHH, structural proteomics, plasmid, hypothetical DNA binding protein; NMR {Xanthomonas axonopodis PV}
Probab=76.42 E-value=0.48 Score=35.10 Aligned_cols=19 Identities=26% Similarity=0.516 Sum_probs=16.8
Q ss_pred cchhhcccccccccccccc
Q 014901 89 DLSSQFGMKRGHMARFKDR 107 (416)
Q Consensus 89 ~l~~~~~m~~~h~~~f~~~ 107 (416)
-|+.+||||||-++||+|.
T Consensus 21 ~l~~~~G~rKGdlSkfVEe 39 (51)
T 2k6l_A 21 FIAAQGGGRKGDLSRFIED 39 (51)
T ss_dssp HHHHHCSCCSSCHHHHHHH
T ss_pred HHHHhcCCccccHHHHHHH
Confidence 4788999999999999974
No 303
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=76.27 E-value=1.2 Score=35.16 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=38.8
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhh
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMT 47 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~ 47 (416)
++.+|+-.-=|..-.+.|.++||.|.-.+.-|+.+|+..|+.|
T Consensus 17 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~ 59 (83)
T 2qkq_A 17 SVGEWLRAIKMGRYEESFAAAGFGSFELVSQISAEDLLRIGVT 59 (83)
T ss_dssp SHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCC
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhCCHHHHHHCCCC
Confidence 6777877777888899999999999999999999999999887
No 304
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=76.13 E-value=0.55 Score=38.05 Aligned_cols=51 Identities=25% Similarity=0.433 Sum_probs=45.0
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~-~l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
++..||+.-+|=||++.+++.|. ++..|..++..||. +-|.. -||-.|.+.
T Consensus 17 ~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~lt~~DL~-~lGI~~~GHrkkIl~ 69 (91)
T 1x40_A 17 DIKDFLMSINLEQYLLHFHESGFTTVKDCAAINDSLLQ-KIGISPTGHRRRILK 69 (91)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhcCHHHHH-HCCCCCHhHHHHHHH
Confidence 57889999999999999999998 68999999999995 58886 699888764
No 305
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=76.09 E-value=3.6 Score=40.17 Aligned_cols=64 Identities=11% Similarity=-0.009 Sum_probs=36.2
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHH------HHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCC
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEA------HQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWG 304 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el------~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~ 304 (416)
.++++..+.||+.|--+||+.|+..- -.+.++...++..++.++.|-.+.-....+.|.=..+|
T Consensus 24 ~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~P 93 (367)
T 3us3_A 24 KNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEED 93 (367)
T ss_dssp HHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTT
T ss_pred HHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCc
Confidence 44444445555555579999884432 14455555565557888888766544334444323444
No 306
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=76.02 E-value=0.67 Score=37.42 Aligned_cols=50 Identities=20% Similarity=0.331 Sum_probs=42.8
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhccccc-ccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFK 105 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~-~l~~l~~~~~~~l~~~~~m~~-~h~~~f~ 105 (416)
++..||..-+|=||++.+++.|. ++..|..++..||. .-|... ||-.|.+
T Consensus 28 ~V~eWL~~lgL~qY~~~F~~~g~~~le~l~~lt~~DL~-~lGIt~~GHRkkIL 79 (86)
T 2k4p_A 28 GMSAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLE-EAGVQDPAHKRLLL 79 (86)
T ss_dssp SSHHHHHTTTCGGGHHHHHTTTCCCHHHHTTCCHHHHH-HTTCCCHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHH-HCCCCCHHHHHHHH
Confidence 45669999999999999999998 69999999999995 688875 8877765
No 307
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.83 E-value=1.7 Score=35.68 Aligned_cols=44 Identities=11% Similarity=0.166 Sum_probs=39.5
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.|++-.-=|..-.+.|.++|+|++-+++-|+.+|+..|..|.
T Consensus 25 sV~eWL~~igL~qY~~~F~~~g~d~le~l~~lt~~DL~~lGIt~ 68 (97)
T 2dl0_A 25 SVSDWLISIGLPMYAGTLSTAGFSTLSQVPSLSHTCLQEAGITE 68 (97)
T ss_dssp SHHHHHHHHTCGGGHHHHHHHTCCSTTSGGGCCHHHHHHHTCCC
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCcHHHHHhcCHHHHHHCCCCC
Confidence 67788877778888999999999999999999999999998883
No 308
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=75.78 E-value=0.96 Score=34.98 Aligned_cols=51 Identities=14% Similarity=0.307 Sum_probs=43.6
Q ss_pred HHhhhccch--hhhhhhHHHHHcCCChHHHhccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLHDR--ALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~--~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
+.-.||... |+-+|++.+...+.+-..|+.++..+|. +.|++ -||.-+++.
T Consensus 10 ~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~~~dL~-~lGI~~~g~r~~il~ 63 (78)
T 3bs7_A 10 DVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQ-RMGVTDNRDREAIWR 63 (78)
T ss_dssp HHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCCHHHHh-HcCCCCHHHHHHHHH
Confidence 456788885 8999999999999999999999999995 79986 588776653
No 309
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=75.57 E-value=1.1 Score=35.65 Aligned_cols=44 Identities=9% Similarity=0.303 Sum_probs=37.5
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.+|+-.-=|..-.+.|.++|+|++..+.-|+.+|++.|+.|.
T Consensus 18 ~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~ 61 (82)
T 2kso_A 18 TVSEWLESIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRL 61 (82)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCC
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCC
Confidence 56677766667788899999999999999999999999887763
No 310
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.99 E-value=0.65 Score=36.44 Aligned_cols=51 Identities=24% Similarity=0.402 Sum_probs=43.3
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~l~~l~---~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
++..||+.-+|=||.+.+++.|.+..+++ .++..||- +.|.. -||-.|.+.
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~~dL~-~lGI~~~ghR~kIl~ 68 (80)
T 2eam_A 14 TVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLL-EIGILNSGHRQRILQ 68 (80)
T ss_dssp CHHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCTTHHH-HSSCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHH-HCCCCCHHHHHHHHH
Confidence 45679999999999999999999988876 99999995 68887 589877653
No 311
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=74.63 E-value=29 Score=36.80 Aligned_cols=127 Identities=12% Similarity=0.051 Sum_probs=69.7
Q ss_pred CCCceechhhcc--CCCEEEEeecCCCCcchHHHHHHHHhccc-------hhhh------cCCeEEEEecCChhh-HHhh
Q 014901 234 KTPPMKALELWR--ESPAVLLCIRRPGCIMCRAEAHQLYAKKP-------IFDA------LGIQLFAVLHEYIES-EVKD 297 (416)
Q Consensus 234 ~G~~VsLsdL~~--~~pvVLvFyRg~gCP~Cn~el~~Ls~~~p-------eL~a------lGV~LVaIspEs~~~-~ik~ 297 (416)
+|.++.+.+++. .+.+||+|--..-.+-+...+.++.+... .+.. .-+.++.|.+..... ++..
T Consensus 495 ~g~~~~l~~~l~~~g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 574 (665)
T 1pn0_A 495 EGLWMHFGDRLVTDGRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVISRYTPKGADRNSRIDVITIHSCHRDDIEMHD 574 (665)
T ss_dssp TTEEEEGGGGCCCSSCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHHHHHSBTTSCTTSSEEEEEEESSCTTSCCGGG
T ss_pred CCcEEEHhHhhccCCCEEEEEecCCcccchhHHHHHHHHHHhhccccHHhhcCCcccCccceeEEEEEecCCCCccchhh
Confidence 588999999986 35566666433222334455555544321 1111 126777786543221 0112
Q ss_pred hcC----CCCCc-eeeecc------chHHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEE
Q 014901 298 FWP----RYWGG-VVVYDQ------GMEFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLF 366 (416)
Q Consensus 298 F~~----~~l~f-~VLsDp------~r~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtF 366 (416)
+-+ ..+.+ .+|.|. +..+|+.||+.+ ..|+++
T Consensus 575 ~p~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~-------------------------------------~~g~~v 617 (665)
T 1pn0_A 575 FPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDE-------------------------------------TKGAVV 617 (665)
T ss_dssp SCTTTTSCTTCCSSEEECSCCSSSCCCCHHHHHTBCT-------------------------------------TTCEEE
T ss_pred CCHHHcCcccchheEeecCcccccccccHHHHcCCCC-------------------------------------CCceEE
Confidence 111 01122 478884 455777776631 025789
Q ss_pred EEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhhhh
Q 014901 367 IVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 367 VId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~~~ 404 (416)
||.||| -|.|...- .+.++|.+.+..+-..+
T Consensus 618 lvRPD~-yV~~~~~~------~~~~~l~~~~~~~~~~~ 648 (665)
T 1pn0_A 618 VVRPDG-YTSLVTDL------EGTAEIDRYFSGILVEP 648 (665)
T ss_dssp EECTTS-BEEEEECT------TTHHHHHHHHHTTBCCC
T ss_pred EECCCC-cEEEEecc------ccHHHHHHHHHHHhcCc
Confidence 999996 78876542 24678888887764433
No 312
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=74.53 E-value=1.5 Score=34.83 Aligned_cols=22 Identities=14% Similarity=0.375 Sum_probs=16.6
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
|++|-..|||+|+....-|.+.
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHHc
Confidence 4446778999999887777654
No 313
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=74.38 E-value=1.5 Score=35.38 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=39.5
Q ss_pred ccchhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 3 SYAMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 3 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
.-++.||+-.-=|..-.+.|.++|+|++-.+.-|+.+|+..|..|.
T Consensus 26 ~~~V~eWL~~lgL~qY~~~F~~~g~~~le~l~~lt~~DL~~lGIt~ 71 (86)
T 2k4p_A 26 EAGMSAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLEEAGVQD 71 (86)
T ss_dssp SCSSHHHHHTTTCGGGHHHHHTTTCCCHHHHTTCCHHHHHHTTCCC
T ss_pred cCcHHHHHHHCCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCC
Confidence 3466777777678888999999999999999999999999998874
No 314
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=73.82 E-value=1.4 Score=38.20 Aligned_cols=65 Identities=12% Similarity=0.125 Sum_probs=44.9
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ec--CChhhHHhhhcC-CCCCceeeeccchHHHHHhCCCc
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LH--EYIESEVKDFWP-RYWGGVVVYDQGMEFFKALGGGK 323 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--sp--Es~~~~ik~F~~-~~l~f~VLsDp~r~lYkALGl~r 323 (416)
|.+|-..+|++|+...+-|.+ .|+..-.| .. .+.+ .+..+.. .+++..-+.......|+.+|+..
T Consensus 4 itiY~~p~C~~crkak~~L~~-------~gi~~~~idi~~~~~~~~-eL~~~~~~~g~p~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN-------SGTEPTIILYLENPPSRD-ELVKLIADMGISVRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-------TTCCCEEECTTTSCCCHH-HHHHHHHHHTSCHHHHBCSSSHHHHHTTTTS
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCCEEEEECCCCCccHH-HHHHHhcccCCCHHHhccCCchhHHhcCCcc
Confidence 568999999999987777665 44543333 32 2333 3555553 56676777799999999999863
No 315
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=73.74 E-value=1.3 Score=35.07 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=16.0
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
|+.|-..||++|+....-|.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~ 24 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQA 24 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCchHHHHHHHHHHH
Confidence 4455679999999877666554
No 316
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=73.17 E-value=2.1 Score=36.44 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=22.4
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHHHhc
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
+.++.+..++ ++| -..|||||+..-+-|.+.
T Consensus 7 ~~~ii~~~~V-vvy-sk~~Cp~C~~ak~lL~~~ 37 (127)
T 3l4n_A 7 YSLILDLSPI-IIF-SKSTCSYSKGMKELLENE 37 (127)
T ss_dssp HHHHHTSCSE-EEE-ECTTCHHHHHHHHHHHHH
T ss_pred HHHHHccCCE-EEE-EcCCCccHHHHHHHHHHh
Confidence 5667777774 333 458999999888877763
No 317
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=73.11 E-value=6.3 Score=30.64 Aligned_cols=31 Identities=19% Similarity=0.054 Sum_probs=17.9
Q ss_pred EEeecCCCCcchH-----HHHHHHHhccchhhhcCCeEEEEe
Q 014901 251 LLCIRRPGCIMCR-----AEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 251 LvFyRg~gCP~Cn-----~el~~Ls~~~peL~alGV~LVaIs 287 (416)
|++|-..|||+|. ..+.++ |++.|+....|-
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~------L~~~~i~~~~~d 39 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRI------LDGKRIQYQLVD 39 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHH------HHHTTCCCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHH------HHHCCCceEEEE
Confidence 3445578999994 334333 345566655443
No 318
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=72.79 E-value=0.87 Score=39.81 Aligned_cols=51 Identities=24% Similarity=0.381 Sum_probs=45.7
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~l~~l~---~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
++..||.+=||=||++.+.+.|....+++ .++..||. ..|++ -||-.+++.
T Consensus 16 ~V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~lt~~DL~-~lGI~~~ghRkkil~ 70 (148)
T 2kiv_A 16 TVGQWLESIGLPQYENHLMANGFDNVQAMGSNVMEDQDLL-EIGILNSGHRQRILQ 70 (148)
T ss_dssp BHHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCCCHHHHH-HHCCSSTTSHHHHHH
T ss_pred hHHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccCCHHHHH-HCCCCCHHHHHHHHH
Confidence 56779999999999999999999998888 79999997 99998 599988874
No 319
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=72.06 E-value=2.8 Score=36.68 Aligned_cols=42 Identities=10% Similarity=-0.084 Sum_probs=28.4
Q ss_pred cCCCEEEEeecCCC--CcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 245 RESPAVLLCIRRPG--CIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 245 ~~~pvVLvFyRg~g--CP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
.++|+||.|+ ..| |+-|+..+--|.++..++....++++-|-
T Consensus 33 ~~~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVd 76 (140)
T 2qgv_A 33 QAPDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIAD 76 (140)
T ss_dssp TCSSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECC
T ss_pred CCCCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEE
Confidence 5567777554 667 99999999888887777643224444443
No 320
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=71.99 E-value=2.1 Score=38.20 Aligned_cols=43 Identities=12% Similarity=0.182 Sum_probs=29.6
Q ss_pred ccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 244 WRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 244 ~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
|.+.|+.|+.|=-+.||+|......+.....+...-.+++|..
T Consensus 11 ~g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r 53 (182)
T 3gn3_A 11 WGHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIR 53 (182)
T ss_dssp EECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEE
T ss_pred cCCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3478999999999999999988776665443321113555543
No 321
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=71.79 E-value=1.5 Score=33.61 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=16.0
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
|.+|-..|||+|+.....|.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 4456678999999876666553
No 322
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=71.08 E-value=1.5 Score=35.15 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=17.0
Q ss_pred EEeecCCCCcchHHHHHHHHhc
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAK 272 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~ 272 (416)
|++|-..|||+|+....-|.+.
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHC
Confidence 4456788999999887777653
No 323
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=70.99 E-value=3.3 Score=35.89 Aligned_cols=41 Identities=7% Similarity=0.177 Sum_probs=27.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHH-hccchhhh-cCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLY-AKKPIFDA-LGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls-~~~peL~a-lGV~LVaI 286 (416)
+.|+.|++|--+-||+|......+. .+..++-+ -.++++..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~ 52 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFV 52 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 4677888999999999998887773 33333322 24776654
No 324
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=70.48 E-value=2.7 Score=34.94 Aligned_cols=63 Identities=14% Similarity=0.053 Sum_probs=41.4
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ecC--ChhhHHhhhcCCCCCceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LHE--YIESEVKDFWPRYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--spE--s~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+||+|+....-|.+ .|+....| ..+ +.+ .++++.. .+...-+.......|+.+|+.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~-~l~~~~~-~~g~~~l~n~~~~~~k~l~~~ 73 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAE-TLDRFLK-TVPWEQLLNRAGTTFRKLPED 73 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHH-HHHHHHH-HSCGGGTBCSSSHHHHHSCHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHH-HHHHHHH-HcChHhhccCCchhhHhcCch
Confidence 668889999999988777765 35554444 322 223 3555543 123456778889999999875
No 325
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=70.18 E-value=2.2 Score=34.53 Aligned_cols=29 Identities=14% Similarity=0.264 Sum_probs=18.1
Q ss_pred hhhccCCCEEEEeecCCCCcchHHHHHHHHh
Q 014901 241 LELWRESPAVLLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 241 sdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~ 271 (416)
.++.+..++ ++ |-..|||+|+.....|.+
T Consensus 13 ~~~i~~~~v-v~-f~~~~Cp~C~~~~~~L~~ 41 (114)
T 2hze_A 13 QQRLANNKV-TI-FVKYTCPFCRNALDILNK 41 (114)
T ss_dssp HTTCCTTCE-EE-EECTTCHHHHHHHHHHTT
T ss_pred HHHhccCCE-EE-EEeCCChhHHHHHHHHHH
Confidence 455555443 33 456899999976665544
No 326
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.79 E-value=0.92 Score=37.35 Aligned_cols=51 Identities=24% Similarity=0.387 Sum_probs=44.7
Q ss_pred HHhhhccchhhhhhhHHHHHcCCC-hHHHhccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKS-LPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~-l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
.+..||..-+|=||++.+.+.|.. +..|..++..|| .+-|.. -||..|-+.
T Consensus 25 sV~eWL~~igL~qY~~~F~~~g~d~le~l~~lt~~DL-~~lGIt~~gHrkkIl~ 77 (97)
T 2dl0_A 25 SVSDWLISIGLPMYAGTLSTAGFSTLSQVPSLSHTCL-QEAGITEERHIRKLLS 77 (97)
T ss_dssp SHHHHHHHHTCGGGHHHHHHHTCCSTTSGGGCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCcHHHHHhcCHHHH-HHCCCCCHHHHHHHHH
Confidence 356799999999999999999998 899999999999 478887 699988764
No 327
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=67.79 E-value=3.1 Score=32.41 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=43.2
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhHHhhhH-----HHHhhhccchh
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQQQKDA-----LEIRSYLHDRA 64 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~~~~~~-----~~~r~~l~~~~ 64 (416)
++++|+-.--|....+.|.++|+ |.-++..|+.+|+..|..+---|.. -++|..++..|
T Consensus 4 ~v~~wL~~lgL~~Y~~~F~~~~i-d~e~l~~lt~~DL~~lGI~~G~RkkIl~ai~~~~~~~~~p~ 67 (74)
T 3k1r_B 4 PLETFLASLHMEDFAALLRQEKI-DLEALMLCSDLDLRSISVPLGPREKILGAVRRRRQAMERPP 67 (74)
T ss_dssp HHHHHHHTTTCGGGHHHHHHTTC-CHHHHTTCCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred hHHHHHHHCCCHHHHHHHHHcCc-CHHHHhHCCHHHHHHcCCCcchHHHHHHHHHHHHHHhcCCC
Confidence 56777776667788899999999 5899999999999999887333322 24455555444
No 328
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=67.76 E-value=2.4 Score=34.08 Aligned_cols=21 Identities=24% Similarity=0.211 Sum_probs=14.8
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 014901 251 LLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~ 271 (416)
|+.|=..|||||...-.-|.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~ 26 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA 26 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH
T ss_pred EEEEcCCCCHhHHHHHHHHHh
Confidence 455667999999986555443
No 329
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.48 E-value=2.3 Score=34.73 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=38.8
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
++.+|+-.-=|....+.|.++|+|+.-.|.-|+.+|++.|..|.
T Consensus 24 ~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~lt~~DL~~lGI~~ 67 (99)
T 2eao_A 24 TVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITL 67 (99)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHHTCCC
T ss_pred HHHHHHHHCCcHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCC
Confidence 67788877778888999999999999999999999999887763
No 330
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=66.07 E-value=2.9 Score=34.48 Aligned_cols=45 Identities=7% Similarity=0.175 Sum_probs=39.4
Q ss_pred cchhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhH
Q 014901 4 YAMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQ 48 (416)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~ 48 (416)
-++.+|+-.-=|....+.|.++|+|+...|.-|+.+|+..|..|.
T Consensus 27 ~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~Lt~eDLkeLGIt~ 71 (100)
T 2kg5_A 27 LDIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELKQLGISA 71 (100)
T ss_dssp CBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTCCHHHHHHHTCCC
T ss_pred ChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhcCHHHHHHCCCCC
Confidence 367888888778888999999999999999999999999887773
No 331
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=64.94 E-value=7.8 Score=34.76 Aligned_cols=41 Identities=12% Similarity=-0.023 Sum_probs=27.9
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLH 288 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIsp 288 (416)
++||||- |-..||+-|+...--|.++..+... .+.++-|=-
T Consensus 41 ~k~VVVd-F~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDV 81 (160)
T 2av4_A 41 ERLVCIR-FGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDI 81 (160)
T ss_dssp SSEEEEE-EECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEET
T ss_pred CCEEEEE-EECCCChhHHHHHHHHHHHHHHccC-CcEEEEEEC
Confidence 4555555 4579999999999988888777643 144444443
No 332
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=64.21 E-value=4.1 Score=31.20 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=14.0
Q ss_pred EeecCC----CCcchHHHHHHHHh
Q 014901 252 LCIRRP----GCIMCRAEAHQLYA 271 (416)
Q Consensus 252 vFyRg~----gCP~Cn~el~~Ls~ 271 (416)
++|-.. |||+|+....-|.+
T Consensus 3 ~iY~~~~~~~~Cp~C~~ak~~L~~ 26 (87)
T 1aba_A 3 KVYGYDSNIHKCGPCDNAKRLLTV 26 (87)
T ss_dssp EEEECCTTTSCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcCccHHHHHHHHHH
Confidence 344557 99999876666554
No 333
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=63.25 E-value=1.3 Score=36.53 Aligned_cols=53 Identities=23% Similarity=0.377 Sum_probs=45.8
Q ss_pred HHHHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhcccc-ccccccccc
Q 014901 53 ALEIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 53 ~~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~---~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
.-++..||+.-||=||++.+.+.|.+..+++ .++..||- ..|+. -||-.|.+.
T Consensus 22 ~~~V~~WL~~igL~qY~~~F~~~gid~~~~l~~~~lt~~DL~-~lGI~~~GhRkkIl~ 78 (103)
T 2ke7_A 22 VQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLL-EIGILNSGHRQRILQ 78 (103)
T ss_dssp -CCTTHHHHHTTCTTCHHHHHHTTCCCHHHHHTTCCCHHHHH-HHTCCCHHHHHHHHH
T ss_pred HhHHHHHHHHCCCHHHHHHHHHcCCCcHHHHhcccCCHHHHh-HCCCCCHHHHHHHHH
Confidence 4467789999999999999999999998876 99999996 68997 699988864
No 334
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=62.97 E-value=2.4 Score=33.27 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=43.0
Q ss_pred HHhhhccchhhhhhhHHHHHcCC-ChHHHhccCcccchhhccccc-ccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGK-SLPELLNLSTGDLSSQFGMKR-GHMARFK 105 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~-~l~~l~~~~~~~l~~~~~m~~-~h~~~f~ 105 (416)
.+..||+.-+|=||++.+.+.|. ++..+..++..||. +-|... ||-.|.+
T Consensus 14 ~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~lt~~DL~-~lGI~~~ghrkkil 65 (78)
T 1v38_A 14 TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLI-ELNIADPEDRARLL 65 (78)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHH-HTTTCCHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhcCHHHHH-HcCCCCHHHHHHHH
Confidence 45679999999999999999999 68889999999985 588874 8887765
No 335
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=62.30 E-value=3.5 Score=34.98 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=23.3
Q ss_pred echhhccCCCEEEEeecC----CCCcchHHHHHHHHh
Q 014901 239 KALELWRESPAVLLCIRR----PGCIMCRAEAHQLYA 271 (416)
Q Consensus 239 sLsdL~~~~pvVLvFyRg----~gCP~Cn~el~~Ls~ 271 (416)
.+.++.++.|| |+|-.+ +.||||+.-.+-|.+
T Consensus 12 ~i~~~i~~~~V-vvF~Kgt~~~P~C~fc~~ak~lL~~ 47 (118)
T 2wul_A 12 QLDALVKKDKV-VVFLKGTPEQPQCGFSNAVVQILRL 47 (118)
T ss_dssp HHHHHHHHSSE-EEEESBCSSSBSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCE-EEEEcCCCCCCCCHHHHHHHHHHHH
Confidence 45777888886 556665 489999987777654
No 336
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.30 E-value=1.4 Score=36.16 Aligned_cols=55 Identities=11% Similarity=0.141 Sum_probs=46.6
Q ss_pred hhhHHHHhhhccchhhhh--hhHHHHHcCCChHHHhccCcccchhhccc-ccccccccc
Q 014901 50 QKDALEIRSYLHDRALMQ--YADIFEASGKSLPELLNLSTGDLSSQFGM-KRGHMARFK 105 (416)
Q Consensus 50 ~~~~~~~r~~l~~~~l~~--y~~~~e~~~~~l~~l~~~~~~~l~~~~~m-~~~h~~~f~ 105 (416)
+-..-++-.||...||=+ |++.++..+++-..|+.+...+|- +.|+ +-||.-+++
T Consensus 29 ~Ws~~~V~~WL~~lgl~~~~y~~~F~~~~I~G~~Ll~Lt~~dLk-eLGI~~~G~R~kil 86 (103)
T 2e8o_A 29 TWGPEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLDESRFE-NLGVSSLGERKKLL 86 (103)
T ss_dssp GCHHHHHHHHHHHHTCCCHHHHHHHHHTTCCTTTTTTCCHHHHH-HTTCCCHHHHHHHH
T ss_pred hCCHHHHHHHHHHcCCChHHHHHHHHHcCCCHHHHHhCCHHHHH-HcCCCCHHHHHHHH
Confidence 344557889999999987 999999999999999999999994 6999 569977765
No 337
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=60.79 E-value=7.3 Score=33.44 Aligned_cols=39 Identities=5% Similarity=0.050 Sum_probs=25.0
Q ss_pred CCEEEEeecCCCCcchHHHHHHH-HhccchhhhcCCeEEEEe
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQL-YAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~L-s~~~peL~alGV~LVaIs 287 (416)
.+++|.|+ .+.||+|......| .++..+.. ..++++.+-
T Consensus 18 ~~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~-~~v~~~~~~ 57 (195)
T 3c7m_A 18 DKTLIKVF-SYACPFCYKYDKAVTGPVSEKVK-DIVAFTPFH 57 (195)
T ss_dssp TTEEEEEE-CTTCHHHHHHHHHTHHHHHHHTT-TTCEEEEEE
T ss_pred CcEEEEEE-eCcCcchhhCcHHHHHHHHHhCC-CceEEEEEe
Confidence 45677777 49999999877776 55443332 135665554
No 338
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.50 E-value=8.6 Score=31.24 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=18.9
Q ss_pred EEeecCCCCcchHH-----HHHHHHhccchhhhcCCeEEEEe
Q 014901 251 LLCIRRPGCIMCRA-----EAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 251 LvFyRg~gCP~Cn~-----el~~Ls~~~peL~alGV~LVaIs 287 (416)
|++|-..|||+|.. .+.++ |++.|+....|-
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~------L~~~gi~y~~vd 45 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRF------LEANKIEFEEVD 45 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHH------HHHTTCCEEEEE
T ss_pred EEEEEcCCCCCcccchhHHHHHHH------HHHcCCCEEEEE
Confidence 44455789999994 34333 445666655553
No 339
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=59.26 E-value=24 Score=33.53 Aligned_cols=41 Identities=7% Similarity=0.038 Sum_probs=31.4
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 014901 248 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 289 (416)
Q Consensus 248 pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE 289 (416)
+.++++|-..||+-|+.....|.++..+++.. +.++.|-.+
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 44455555689999999999999998888754 677777665
No 340
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=59.23 E-value=19 Score=36.48 Aligned_cols=83 Identities=17% Similarity=0.120 Sum_probs=49.9
Q ss_pred CCCceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCCCCceeeeccch
Q 014901 234 KTPPMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRYWGGVVVYDQGM 313 (416)
Q Consensus 234 ~G~~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~l~f~VLsDp~r 313 (416)
.|+++++-||+..+-++|.+-.+ -.+.++ .. ...++.|+.|-++.-.. . +.|+..
T Consensus 434 ~~~~~~~~dl~g~~f~ll~~~~~----~~~~~~--~~---~~~~~~~~~~~~~~~~~----------~------~~d~~~ 488 (535)
T 3ihg_A 434 HGERLSTVDLFGDGWTLLAGELG----ADWVAA--AE---AVSAELGVPVRAYRVGA----------G------LTDPES 488 (535)
T ss_dssp TTEEEEGGGGCSSSEEEEECTTC----HHHHHH--HH---HHHHHHTCCEEEEEBTT----------T------BBCSSC
T ss_pred CCceeeHHHhcCCceEEEecCCc----cHHHHH--HH---HHHHhcCCceEEEEeCC----------c------cccCcc
Confidence 48889999999777666653211 111111 11 12344576554443221 0 567877
Q ss_pred HHHHHhCCCcccccccccccccCHHHHHHHHHHHhcCCccccCCCCcccceEEEEecCCCcEEEEEec
Q 014901 314 EFFKALGGGKLLKDKFLSGFLLNPRAIANYKRARTLGVEQNFKGEGEIKGGLFIVGRGRSGIAYQFIE 381 (416)
Q Consensus 314 ~lYkALGl~r~~r~s~~sgfll~P~v~~~~~rA~~~G~~gn~~GD~lqlGGtFVId~gG~~I~yah~d 381 (416)
.+.+++|+.. +|.++|.||| -|.|....
T Consensus 489 ~~~~~~~~~~---------------------------------------~~~~lvRPD~-~va~r~~~ 516 (535)
T 3ihg_A 489 AVSERYGIGK---------------------------------------AGASLVRPDG-IVAWRTDE 516 (535)
T ss_dssp CHHHHHTCTT---------------------------------------TCEEEECTTS-BEEEEESS
T ss_pred hHHHHhCCCC---------------------------------------CceEeeCCCc-eeEEecCC
Confidence 8888777631 2789999996 89888765
No 341
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=59.20 E-value=15 Score=31.74 Aligned_cols=29 Identities=21% Similarity=0.054 Sum_probs=22.1
Q ss_pred EEEEeecCCCC--cchHHHHHHHHhccchhh
Q 014901 249 AVLLCIRRPGC--IMCRAEAHQLYAKKPIFD 277 (416)
Q Consensus 249 vVLvFyRg~gC--P~Cn~el~~Ls~~~peL~ 277 (416)
.||++|...|| +-|+..+--|.++..++.
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~~ 65 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAFP 65 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTST
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHcc
Confidence 45666666699 999999888877766664
No 342
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=57.71 E-value=6.4 Score=32.58 Aligned_cols=44 Identities=30% Similarity=0.464 Sum_probs=37.5
Q ss_pred chhhhhhccccccchhhHhhcCCCCCcccc--ccChhhhHHhhhhH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLK--VMNAEDMDAINMTQ 48 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k--~~~~~~~~~~~~~~ 48 (416)
++.||+-.-=|..-.+.|.++|+|++-.+. -|+.+|+..|..|.
T Consensus 31 ~V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~Lt~eDL~eLGIt~ 76 (101)
T 2lmr_A 31 SVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISD 76 (101)
T ss_dssp CHHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCCCHHHHHHHTCCC
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHHHCCCCC
Confidence 567777666678888999999999988887 89999999998884
No 343
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=57.71 E-value=2.4 Score=34.91 Aligned_cols=52 Identities=19% Similarity=0.330 Sum_probs=44.5
Q ss_pred HHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchh-hccc-cccccccccc
Q 014901 53 ALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSS-QFGM-KRGHMARFKD 106 (416)
Q Consensus 53 ~~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~-~~~m-~~~h~~~f~~ 106 (416)
.=+...||...|+=+|++.++ . ++=..|+.++..||-. .+|+ +-||.-||+.
T Consensus 22 ~edV~~WL~~~Gl~~Y~~~F~-~-IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~ 75 (97)
T 2d8c_A 22 PKKVADWLLENAMPEYCEPLE-H-FTGQDLINLTQEDFKKPPLYRVSSDNGQRLLD 75 (97)
T ss_dssp TTHHHHHHHHTTCTTTTTTTT-T-CCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHH-c-CCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHH
Confidence 346788999999999999995 4 8889999999999988 6786 5799988875
No 344
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.94 E-value=7 Score=30.41 Aligned_cols=43 Identities=21% Similarity=0.359 Sum_probs=36.7
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccc--cccChhhhHHhhhh
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTL--KVMNAEDMDAINMT 47 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~--k~~~~~~~~~~~~~ 47 (416)
++.+|+-.-=|..-.+.|.++|+|+.-.+ +-|+.+|+..|+.|
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~~dL~~lGI~ 58 (80)
T 2eam_A 14 TVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGIL 58 (80)
T ss_dssp CHHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCTTHHHHSSCC
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHHHHCCCC
Confidence 56677766667888999999999998888 89999999998877
No 345
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=56.21 E-value=8.4 Score=34.51 Aligned_cols=25 Identities=12% Similarity=0.380 Sum_probs=20.1
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHH
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQL 269 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~L 269 (416)
.+.|+.|+.|=-+.||+|...-..+
T Consensus 27 ~~a~vtvvef~D~~CP~C~~~~~~~ 51 (202)
T 3gha_A 27 DDAPVTVVEFGDYKCPSCKVFNSDI 51 (202)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHh
Confidence 3568888888999999999865554
No 346
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=55.26 E-value=20 Score=32.79 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=22.9
Q ss_pred chhhccC--CCEEEEeecCCC-CcchHHHHHHHHhcc
Q 014901 240 ALELWRE--SPAVLLCIRRPG-CIMCRAEAHQLYAKK 273 (416)
Q Consensus 240 LsdL~~~--~pvVLvFyRg~g-CP~Cn~el~~Ls~~~ 273 (416)
|.+++++ +|++|.||=-.| |+.|+....-|.++.
T Consensus 17 l~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela 53 (243)
T 2hls_A 17 LRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFE 53 (243)
T ss_dssp HHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHH
Confidence 4556654 799988885433 999988765555443
No 347
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=52.98 E-value=6.9 Score=37.88 Aligned_cols=38 Identities=18% Similarity=0.389 Sum_probs=26.7
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
+++.+|+.|=-+-||||+....+|.+.. ++..++++.+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l---~~~~Vr~i~~ 183 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHL---KENTVRMVVV 183 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHH---HHCEEEEEEC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHh---hCCcEEEEEe
Confidence 3556667777999999999998888544 3444555543
No 348
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=51.45 E-value=8.2 Score=31.64 Aligned_cols=63 Identities=11% Similarity=0.039 Sum_probs=40.7
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE--ecC--ChhhHHhhhcCCCCCceeeeccchHHHHHhCCC
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV--LHE--YIESEVKDFWPRYWGGVVVYDQGMEFFKALGGG 322 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI--spE--s~~~~ik~F~~~~l~f~VLsDp~r~lYkALGl~ 322 (416)
|.+|-..+||+|+...+-|.+ .|+....| ..+ +.+ .++++.. .+...-+.......|+.+|+.
T Consensus 2 i~iY~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~-~l~~~~~-~~g~~~l~n~~~~~~k~l~~~ 68 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDRE-HLRRWCA-EHGWQTVLNRAGTTFRKLDEA 68 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHH-HHHHHHH-HHCHHHHBCTTSHHHHTSCHH
T ss_pred EEEEECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHH-HHHHHHH-hCChHHhccCCcHhHHhcCcc
Confidence 567888999999987777655 46665444 322 223 3555543 122456677888999998875
No 349
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=49.78 E-value=3 Score=34.54 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=42.2
Q ss_pred HHhhhccchhhhhhhHHHHHcCCChHHHh---ccCcccchhhccccc-cccccccc
Q 014901 55 EIRSYLHDRALMQYADIFEASGKSLPELL---NLSTGDLSSQFGMKR-GHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~~~~l~~y~~~~e~~~~~l~~l~---~~~~~~l~~~~~m~~-~h~~~f~~ 106 (416)
.+..||..-+|-||++.+++.|..-.|++ .++..|| .+-|..+ ||-.|.+.
T Consensus 31 ~V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~Lt~eDL-~eLGIt~~GHRkkIL~ 85 (101)
T 2lmr_A 31 SVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDL-RDIGISDPQHRRKLLQ 85 (101)
T ss_dssp CHHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCCCHHHH-HHHTCCCHHHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCHHHH-HHCCCCCHHHHHHHHH
Confidence 46679999999999999999999855544 5999998 5789885 99888764
No 350
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=49.20 E-value=13 Score=33.70 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=22.3
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHh
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~ 271 (416)
.+.|+.|+.|=-+-||||+.....+..
T Consensus 13 ~~a~vtivef~D~~Cp~C~~~~~~~~~ 39 (205)
T 3gmf_A 13 PAAKLRLVEFVSYTCPHCSHFEIESEG 39 (205)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHHHH
Confidence 467899999999999999988766543
No 351
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.16 E-value=18 Score=32.29 Aligned_cols=46 Identities=7% Similarity=0.065 Sum_probs=30.6
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHHHhc---cchhhhcCCeEEEEecCCh
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQLYAK---KPIFDALGIQLFAVLHEYI 291 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~Ls~~---~peL~alGV~LVaIspEs~ 291 (416)
++++.+++++.+.||+.|+...+++-.. ..-|++ +.=+++..-.+.
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~ 101 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKD 101 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSH
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCc
Confidence 4578899999999999999999887443 233433 333444434443
No 352
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=46.00 E-value=15 Score=33.65 Aligned_cols=42 Identities=10% Similarity=0.119 Sum_probs=27.2
Q ss_pred cCCCEEEEeecCCCCcchHHHHHHH-Hhccchhh-hcCCeEEEE
Q 014901 245 RESPAVLLCIRRPGCIMCRAEAHQL-YAKKPIFD-ALGIQLFAV 286 (416)
Q Consensus 245 ~~~pvVLvFyRg~gCP~Cn~el~~L-s~~~peL~-alGV~LVaI 286 (416)
.+.|+.|+.|=-+.||+|+..-..+ .++..++- .-.++++..
T Consensus 37 ~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~ 80 (226)
T 3f4s_A 37 PKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFR 80 (226)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEE
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 4678888889999999999876553 33333331 223565544
No 353
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=45.44 E-value=6.1 Score=38.17 Aligned_cols=55 Identities=24% Similarity=0.237 Sum_probs=48.0
Q ss_pred hhhHHHHhhhccchhhhhhhHHHHHcCCChHHHhccCcccchhhccccc-cccccc
Q 014901 50 QKDALEIRSYLHDRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMKR-GHMARF 104 (416)
Q Consensus 50 ~~~~~~~r~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~~-~h~~~f 104 (416)
|-++=++-++|..-||=+|.+.+...+++=.+|+++++.||....||+. +|-.++
T Consensus 17 ~W~~e~V~~WLe~~GL~~Y~~~f~~n~~dG~~Ll~lt~~dLe~eLGI~nplHRkKL 72 (265)
T 3tad_C 17 KWTKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKL 72 (265)
T ss_dssp GSCHHHHHHHHHHTTCCTTHHHHTTTCSCSHHHHHSCHHHHHHHTCCCSHHHHHHH
T ss_pred hCChHHHHHHHHHHCHHHHHHHHHHhCCchHHHHhCCHHHHHHHhCCCCHHHHHHH
Confidence 4456678899998999999999999999999999999999999999874 676665
No 354
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=43.26 E-value=7.7 Score=34.43 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=22.4
Q ss_pred CCEEEEeecCCCCcchHHHHHHH---HhccchhhhcCCeEEEE
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQL---YAKKPIFDALGIQLFAV 286 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~L---s~~~peL~alGV~LVaI 286 (416)
+++|+ -|=.+|||+|......| .++...+.+ +++++-+
T Consensus 22 ~~~vv-ef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~ 62 (191)
T 3l9s_A 22 EPQVL-EFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKY 62 (191)
T ss_dssp SSCEE-EEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEE
T ss_pred CCeEE-EEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEE
Confidence 45544 55689999999877654 233222222 4666554
No 355
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=42.31 E-value=21 Score=31.24 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=24.8
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 248 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 248 pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
|+.|.+|=.+.||+|......+.++.. +...+++++-+.
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 456788889999999955444444333 333357776553
No 356
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=39.21 E-value=12 Score=30.70 Aligned_cols=43 Identities=21% Similarity=0.359 Sum_probs=35.6
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccc--cccChhhhHHhhhh
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTL--KVMNAEDMDAINMT 47 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~--k~~~~~~~~~~~~~ 47 (416)
++.+|+-.-=|..-.+.|.++|+|+.-.+ .-|+.+|+..|+.|
T Consensus 24 ~V~~WL~~igL~qY~~~F~~~gid~~~~l~~~~lt~~DL~~lGI~ 68 (103)
T 2ke7_A 24 TVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGIL 68 (103)
T ss_dssp CTTHHHHHTTCTTCHHHHHHTTCCCHHHHHTTCCCHHHHHHHTCC
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCcHHHHhcccCCHHHHhHCCCC
Confidence 45666666667777899999999998888 88999999998877
No 357
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=38.46 E-value=18 Score=29.21 Aligned_cols=49 Identities=24% Similarity=0.396 Sum_probs=39.7
Q ss_pred HHhhhcc--chhhhhhhHHHHHcCCChHHHhccCcccchhhcccc-ccccccccc
Q 014901 55 EIRSYLH--DRALMQYADIFEASGKSLPELLNLSTGDLSSQFGMK-RGHMARFKD 106 (416)
Q Consensus 55 ~~r~~l~--~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~~~~m~-~~h~~~f~~ 106 (416)
+.-.||+ +.++-+| .+.+.+++-..|+.++..||- +.|++ -||.-+.+.
T Consensus 18 ~V~~WL~~l~~~l~~Y--~F~~~~I~G~~LL~Lt~~dL~-~LGI~~~Ghr~~Il~ 69 (91)
T 1wwv_A 18 KVATWLRGLDDSLQDY--PFEDWQLPGKNLLQLCPQSLE-ALAVRSLGHQELILG 69 (91)
T ss_dssp THHHHHHHHCHHHHTS--CHHHHCCCHHHHTTCCTTTGG-GGTCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCccccc--cHHhcCccHHHHhhCCHHHHH-HcCCCcHhHHHHHHH
Confidence 3456777 6688999 799999999999999999996 68885 578766654
No 358
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=36.23 E-value=19 Score=34.71 Aligned_cols=28 Identities=21% Similarity=0.355 Sum_probs=22.4
Q ss_pred CCC-EEEEeecCCCCcchHHHHHHHHhcc
Q 014901 246 ESP-AVLLCIRRPGCIMCRAEAHQLYAKK 273 (416)
Q Consensus 246 ~~p-vVLvFyRg~gCP~Cn~el~~Ls~~~ 273 (416)
++| ++|..|=..|||||..--+-|.+..
T Consensus 40 ~~~~~~VelyTs~gCp~C~~Ak~lL~~~~ 68 (270)
T 2axo_A 40 EAVKGVVELFTSQGCASCPPADEALRKMI 68 (270)
T ss_dssp SCCCCEEEEEECTTCTTCHHHHHHHHHHH
T ss_pred cCCCcEEEEEeCCCCCChHHHHHHHHHhh
Confidence 344 8899999999999998777776653
No 359
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=34.64 E-value=1.9e+02 Score=30.20 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=19.6
Q ss_pred ceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHh
Q 014901 363 GGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQ 399 (416)
Q Consensus 363 GGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~ 399 (416)
|+++||.||| -|.|...- .+.++|-+.+..
T Consensus 606 g~~v~vRPD~-yv~~~~~~------~~~~~l~~~~~~ 635 (639)
T 2dkh_A 606 GALVVVRPDQ-YVAQVLPL------GDHAALSAYFES 635 (639)
T ss_dssp CEEEEECTTS-BEEEEECT------TCHHHHHHHHHT
T ss_pred eEEEEECCCC-ceEEeech------hhHHHHHHHHHH
Confidence 5889999996 78776542 234666555543
No 360
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=33.03 E-value=15 Score=33.06 Aligned_cols=21 Identities=24% Similarity=0.619 Sum_probs=15.5
Q ss_pred EEeecCCCCcchHHHHHHHHh
Q 014901 251 LLCIRRPGCIMCRAEAHQLYA 271 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~ 271 (416)
|.+|-..|||+|+....-|.+
T Consensus 172 i~ly~~~~Cp~C~~a~~~L~~ 192 (241)
T 1nm3_A 172 ISIFTKPGCPFCAKAKQLLHD 192 (241)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 445566899999987666654
No 361
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens}
Probab=32.15 E-value=43 Score=26.65 Aligned_cols=45 Identities=11% Similarity=0.251 Sum_probs=37.1
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhHH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQQ 49 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~~ 49 (416)
+++||+-.-=+.--.+.|.+.|...+-.+=-|+.||+..|..|..
T Consensus 8 SV~~WLd~i~m~~Y~d~F~~~G~~sl~~V~~lt~eDL~~mGIt~g 52 (82)
T 2y9t_A 8 SIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLASLKIPEQ 52 (82)
T ss_dssp BHHHHHHHHTCGGGHHHHHTTTCCBSGGGTTCCHHHHHHTTCCHH
T ss_pred CHHHHHHHcCchHHHHHHHHcCCCcHHHHHhcCHHHHHhcCCChh
Confidence 566665554455667899999999999999999999999999964
No 362
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=31.35 E-value=27 Score=35.11 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=19.1
Q ss_pred chhhccCCCEEEEeecCCCCcchHHHHHHH
Q 014901 240 ALELWRESPAVLLCIRRPGCIMCRAEAHQL 269 (416)
Q Consensus 240 LsdL~~~~pvVLvFyRg~gCP~Cn~el~~L 269 (416)
+.++.+..+++| |. ..|||||+...+.|
T Consensus 254 V~~lI~~~~VvV-Ys-k~~CPyC~~Ak~~L 281 (362)
T 2jad_A 254 VKDLIAENEIFV-AS-KTYCPYSHAALNTL 281 (362)
T ss_dssp HHHHHHTCSEEE-EE-CTTCHHHHHHHHHH
T ss_pred HHHHhccCCEEE-EE-cCCCcchHHHHHHH
Confidence 456667777544 33 48999999877643
No 363
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=30.56 E-value=98 Score=25.01 Aligned_cols=62 Identities=5% Similarity=0.033 Sum_probs=35.6
Q ss_pred CCCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecCChhhHHhhhcCCC--CCceeeec
Q 014901 246 ESPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHEYIESEVKDFWPRY--WGGVVVYD 310 (416)
Q Consensus 246 ~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspEs~~~~ik~F~~~~--l~f~VLsD 310 (416)
+.|+|+.|+=. |.-|+.....|.++..+++.. +.++-|-.+.-......|.-.. +|--++.+
T Consensus 23 ~~pv~v~f~a~--~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~ 86 (133)
T 2djk_A 23 GIPLAYIFAET--AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFAIQE 86 (133)
T ss_dssp TSCEEEEECSC--SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEEEEC
T ss_pred CCCEEEEEecC--hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEEEEe
Confidence 46777776543 788998888888776666432 5666665443332233343233 55444443
No 364
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=29.76 E-value=38 Score=30.28 Aligned_cols=36 Identities=17% Similarity=0.041 Sum_probs=27.0
Q ss_pred CEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 248 PAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 248 pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
++-|.||--+-||+|..-...|.++..+. +++|+-.
T Consensus 5 ~~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~ 40 (226)
T 1r4w_A 5 PRVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLR 40 (226)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEE
T ss_pred CceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 35578889999999999998888865543 5665443
No 365
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=28.60 E-value=49 Score=26.66 Aligned_cols=48 Identities=10% Similarity=0.130 Sum_probs=35.2
Q ss_pred ccccccCCCCceechhhccCCCEEEEeecCC--CCcchHHHHH-----HHHhccchh
Q 014901 227 MERLVKTKTPPMKALELWRESPAVLLCIRRP--GCIMCRAEAH-----QLYAKKPIF 276 (416)
Q Consensus 227 ~~~~v~~~G~~VsLsdL~~~~pvVLvFyRg~--gCP~Cn~el~-----~Ls~~~peL 276 (416)
+.|.+..+|-.|.|-++ + ..+|.+-|.|. |||.....+. .|.+..|++
T Consensus 19 IRP~L~~dGGdvelv~v-~-~g~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev 73 (88)
T 1xhj_A 19 LRPFLLRDGGDCTLVDV-E-DGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGV 73 (88)
T ss_dssp HHHHHHHHSCEEEEEEC-C-SSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTC
T ss_pred hcHHHHhcCCeEEEEEE-E-CCEEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCc
Confidence 45667778999999997 4 45777777777 8999988888 344444554
No 366
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A
Probab=27.64 E-value=41 Score=25.88 Aligned_cols=45 Identities=11% Similarity=0.251 Sum_probs=36.8
Q ss_pred chhhhhhccccccchhhHhhcCCCCCccccccChhhhHHhhhhHH
Q 014901 5 AMEDFVGNGVLKGQLPKLLEEGWDDVPTLKVMNAEDMDAINMTQQ 49 (416)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~k~~~~~~~~~~~~~~~ 49 (416)
|++||+-.-=+---...|.+.|..-+-.+=-|+.||+..|..|.-
T Consensus 6 sv~~WLd~i~m~~Y~d~F~~~g~~s~~~v~~lt~eDL~~~GIt~g 50 (69)
T 2y9u_A 6 SIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLASLKIPEQ 50 (69)
T ss_dssp BHHHHHHTTTCGGGHHHHHTTTCCBHHHHTTCCHHHHHHTTCCHH
T ss_pred cHHHHHHHcCChHHHHHHHHcCCCcHHHHHHcCHHHHHhcCCChh
Confidence 456665554455567899999999999999999999999999974
No 367
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=27.26 E-value=38 Score=28.77 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=31.1
Q ss_pred cceEEEEecCCCcEEEEEecCCCCC-----CCCHHHHHHHHHhhhhhh
Q 014901 362 KGGLFIVGRGRSGIAYQFIERNFGD-----WAPLAEVIEICTQLQDQQ 404 (416)
Q Consensus 362 lGGtFVId~gG~~I~yah~d~d~gD-----rad~~eVLaAlk~l~~~~ 404 (416)
.|.++++|++| ++++.+.+.+... ..+.+++++.++.+....
T Consensus 104 ~Pt~~~~d~~G-~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 104 IPRILFLDPSG-KVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp SSEEEEECTTS-CBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC-CEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhc
Confidence 68999999986 7777666654433 278899999998875443
No 368
>1ic9_A TH10AOX; three stranded antiparallel beta-sheet mini-protein motif de novo protein design; HET: DPR DAL; NMR {Synthetic} SCOP: k.26.1.1 PDB: 1ico_A* 1icl_A*
Probab=26.69 E-value=18 Score=23.15 Aligned_cols=9 Identities=44% Similarity=0.988 Sum_probs=7.4
Q ss_pred eecCCCCcc
Q 014901 253 CIRRPGCIM 261 (416)
Q Consensus 253 FyRg~gCP~ 261 (416)
-||++|||-
T Consensus 11 tfrgpgcpt 19 (29)
T 1ic9_A 11 TFRGPGCPT 19 (29)
T ss_dssp EEECSCCCC
T ss_pred eecCCCCCc
Confidence 479999984
No 369
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=26.37 E-value=98 Score=27.50 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=34.8
Q ss_pred chhhccC-CCEEEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEecC
Q 014901 240 ALELWRE-SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVLHE 289 (416)
Q Consensus 240 LsdL~~~-~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIspE 289 (416)
+..++.. .|.+++||-..||.-|+..+..+.++..+++.. +..+.|-.+
T Consensus 123 ~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~ 172 (227)
T 4f9z_D 123 VIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSG 172 (227)
T ss_dssp HHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETT
T ss_pred HHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCc
Confidence 3455554 377777777889999999888888877777653 555555553
No 370
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=25.78 E-value=42 Score=29.37 Aligned_cols=33 Identities=6% Similarity=-0.117 Sum_probs=25.9
Q ss_pred EEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEE
Q 014901 251 LLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAV 286 (416)
Q Consensus 251 LvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaI 286 (416)
|.||--+-||+|..-...|.++..++ |++|+-.
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~---~~~v~~~ 35 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDY---GLTIRYN 35 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 67888999999999999988876655 5665543
No 371
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=25.38 E-value=31 Score=34.37 Aligned_cols=61 Identities=23% Similarity=0.290 Sum_probs=0.0
Q ss_pred cChhhhHHhhhhHHhhhHHHHh-----------------------hhccchhhhhhhHHHHHcCCChHHHhccCcccchh
Q 014901 36 MNAEDMDAINMTQQQKDALEIR-----------------------SYLHDRALMQYADIFEASGKSLPELLNLSTGDLSS 92 (416)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~r-----------------------~~l~~~~l~~y~~~~e~~~~~l~~l~~~~~~~l~~ 92 (416)
|+-|+|++|..+..-...-|.. .||.|-||-||.+.+..++..-.-|-.+...||-.
T Consensus 123 ~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~q~l~~g~ldh~WV~~~WL~dIGLpQY~~~F~~~~VDgR~L~~Lt~~DL~~ 202 (334)
T 3tac_B 123 VTHEEMENLAAQAKTKESEEGSWAQCPVFLQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRV 202 (334)
T ss_dssp CBHHHHHHHHHHHTTC--------------------CCCHHHHHHTHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHHH
T ss_pred cchhhhhhhhcccccccccccccccccchhhhhhcccCccCcchhhhccccChHHhHHHHHhcCcchhhhhhccHHHHHh
Q ss_pred hccc
Q 014901 93 QFGM 96 (416)
Q Consensus 93 ~~~m 96 (416)
+.||
T Consensus 203 ~LgI 206 (334)
T 3tac_B 203 HLKM 206 (334)
T ss_dssp TTCC
T ss_pred ccCC
No 372
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=24.91 E-value=31 Score=33.34 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=26.0
Q ss_pred ceechhhccCCCEEEEeecCCCCcchHHHHHHHHhccchh
Q 014901 237 PMKALELWRESPAVLLCIRRPGCIMCRAEAHQLYAKKPIF 276 (416)
Q Consensus 237 ~VsLsdL~~~~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL 276 (416)
.+.+.+.+.+..+ +.| --+|||.|+.....+.+...++
T Consensus 189 ~~~la~~l~~~~v-V~F-~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGG-TMY-GAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTC-EEE-ECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCE-EEE-ECCCCHHHHHHHHHHHHHHHHc
Confidence 4556666655443 444 4789999999988888765444
No 373
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=24.51 E-value=40 Score=28.26 Aligned_cols=36 Identities=3% Similarity=-0.095 Sum_probs=26.7
Q ss_pred cceEEEEecCCCcEEEEEecCCCCCCCCHHHHHHHHHhhhh
Q 014901 362 KGGLFIVGRGRSGIAYQFIERNFGDWAPLAEVIEICTQLQD 402 (416)
Q Consensus 362 lGGtFVId~gG~~I~yah~d~d~gDrad~~eVLaAlk~l~~ 402 (416)
.|.++++|++| ++++.+. |-..+.+++++.++.+..
T Consensus 131 ~Pt~~lid~~G-~~~~~~~----G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 131 QPFYVLIDNEG-NPLNKSY----AYDEDISKYINFLQTGLE 166 (172)
T ss_dssp SSEEEEECTTS-CBSSCCB----CSCCCHHHHHHHHHHHHH
T ss_pred cceEEEECCCC-CEEeecc----CCCCCHHHHHHHHHHHHH
Confidence 68999999997 7877665 444458888888776543
No 374
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=23.34 E-value=53 Score=28.80 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=26.7
Q ss_pred EEEeecCCCCcchHHHHHHHHhccchhhhcCCeEEEEe
Q 014901 250 VLLCIRRPGCIMCRAEAHQLYAKKPIFDALGIQLFAVL 287 (416)
Q Consensus 250 VLvFyRg~gCP~Cn~el~~Ls~~~peL~alGV~LVaIs 287 (416)
-|.||--+.||+|..-...|.++..++. .+++++-+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~-~~v~v~~~p 40 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP-GVIQFEYVV 40 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC-TTSEEEEEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC-CCceEEEEe
Confidence 4778889999999988877776655542 256766554
No 375
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=22.09 E-value=49 Score=30.28 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=30.1
Q ss_pred CCEEEEeecCCCCcchHHHHHHHHhccchhh-hcCCeEEEE
Q 014901 247 SPAVLLCIRRPGCIMCRAEAHQLYAKKPIFD-ALGIQLFAV 286 (416)
Q Consensus 247 ~pvVLvFyRg~gCP~Cn~el~~Ls~~~peL~-alGV~LVaI 286 (416)
+|+-|-||--+-||+|..-...|.++..++. ..+++|.-.
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~ 41 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHR 41 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEE
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEE
Confidence 4567899999999999999999988766654 346665543
No 376
>1ku3_A Sigma factor SIGA; helix-turn-helix, transcription; 1.80A {Thermus aquaticus} SCOP: a.4.13.2 PDB: 1ku7_A 1rio_H 3n97_A*
Probab=20.50 E-value=55 Score=24.03 Aligned_cols=28 Identities=18% Similarity=0.392 Sum_probs=19.8
Q ss_pred hhhHHhhhHHHHhhhc---cchhhhhhhHHH
Q 014901 45 NMTQQQKDALEIRSYL---HDRALMQYADIF 72 (416)
Q Consensus 45 ~~~~~~~~~~~~r~~l---~~~~l~~y~~~~ 72 (416)
.|++.|+..+.+|-+| ++...-+.|+.|
T Consensus 10 ~L~~~er~il~l~~~l~~~~~~s~~eIA~~l 40 (73)
T 1ku3_A 10 KLSEREAMVLKMRKGLIDGREHTLEEVGAYF 40 (73)
T ss_dssp TSCHHHHHHHHHHHTTTTSSCCCHHHHHHHH
T ss_pred hCCHHHHHHHHHHHhcccCCCCCHHHHHHHH
Confidence 3699999999999888 444444444443
Done!