Query 014903
Match_columns 416
No_of_seqs 352 out of 2613
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 03:11:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 1.7E-67 5.8E-72 519.6 18.9 279 10-358 26-315 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 3.2E-64 1.1E-68 479.0 22.9 240 113-354 7-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 2.5E-47 8.6E-52 346.2 19.1 180 117-359 2-181 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 1E-45 3.5E-50 335.5 20.6 178 116-358 2-180 (180)
5 1c3g_A Heat shock protein 40; 100.0 3.9E-42 1.3E-46 309.1 15.8 169 118-354 1-170 (170)
6 1xao_A YDJ1, mitochondrial pro 100.0 2.7E-29 9.3E-34 212.9 13.1 118 263-383 1-120 (121)
7 3i38_A Putative chaperone DNAJ 99.9 2E-26 6.9E-31 191.6 9.7 95 259-359 2-96 (109)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 7E-25 2.4E-29 180.8 4.0 90 11-100 2-98 (103)
9 2och_A Hypothetical protein DN 99.9 1.6E-23 5.6E-28 161.7 4.9 71 6-76 2-73 (73)
10 1hdj_A Human HSP40, HDJ-1; mol 99.9 3.5E-23 1.2E-27 161.5 5.9 70 11-80 2-74 (77)
11 2o37_A Protein SIS1; HSP40, J- 99.9 2.3E-23 8E-28 168.1 4.9 75 6-80 2-77 (92)
12 2ctr_A DNAJ homolog subfamily 99.9 1.3E-22 4.5E-27 162.3 6.1 72 10-81 5-79 (88)
13 2ej7_A HCG3 gene; HCG3 protein 99.9 1.7E-22 6E-27 159.4 5.8 71 9-79 6-81 (82)
14 2dn9_A DNAJ homolog subfamily 99.9 2.2E-22 7.6E-27 157.7 4.9 68 10-77 5-76 (79)
15 2ctp_A DNAJ homolog subfamily 99.9 2.4E-22 8.2E-27 157.1 4.6 68 10-77 5-75 (78)
16 2dmx_A DNAJ homolog subfamily 99.8 4.5E-22 1.6E-26 160.5 5.3 71 10-80 7-82 (92)
17 2cug_A Mkiaa0962 protein; DNAJ 99.8 4.8E-22 1.7E-26 159.0 4.7 69 9-77 14-85 (88)
18 2ctq_A DNAJ homolog subfamily 99.8 4.8E-22 1.7E-26 166.2 4.4 72 8-79 16-91 (112)
19 2lgw_A DNAJ homolog subfamily 99.8 3.8E-22 1.3E-26 163.0 3.6 69 12-80 2-75 (99)
20 2yua_A Williams-beuren syndrom 99.8 2.1E-21 7.1E-26 158.8 6.3 65 9-73 14-82 (99)
21 2ctw_A DNAJ homolog subfamily 99.8 1.6E-21 5.3E-26 162.3 5.6 71 9-79 14-88 (109)
22 2ctt_A DNAJ homolog subfamily 99.8 3.8E-21 1.3E-25 158.6 4.8 101 118-225 2-103 (104)
23 1wjz_A 1700030A21RIK protein; 99.8 3.1E-21 1.1E-25 156.2 3.4 68 8-75 12-89 (94)
24 1gh6_A Large T antigen; tumor 99.8 2.7E-21 9.1E-26 161.6 0.1 65 11-75 7-73 (114)
25 1faf_A Large T antigen; J doma 99.8 1E-20 3.6E-25 148.1 2.7 65 12-77 11-77 (79)
26 3apq_A DNAJ homolog subfamily 99.8 1.4E-20 4.6E-25 173.6 3.8 86 12-100 2-91 (210)
27 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 1.3E-20 4.4E-25 156.8 2.7 69 8-76 11-87 (109)
28 2pf4_E Small T antigen; PP2A, 99.8 6.5E-21 2.2E-25 170.0 -0.2 65 11-75 10-76 (174)
29 2ys8_A RAB-related GTP-binding 99.8 9.4E-20 3.2E-24 146.3 3.7 60 10-69 25-87 (90)
30 2l6l_A DNAJ homolog subfamily 99.8 2.2E-19 7.6E-24 158.6 5.0 66 10-75 8-83 (155)
31 2guz_A Mitochondrial import in 99.7 7.7E-19 2.6E-23 134.6 3.7 59 10-68 12-71 (71)
32 1iur_A KIAA0730 protein; DNAJ 99.7 7.6E-19 2.6E-23 140.0 2.0 61 9-69 13-78 (88)
33 3ag7_A Putative uncharacterize 99.7 2.4E-18 8.1E-23 141.9 2.3 57 8-65 37-104 (106)
34 2qwo_B Putative tyrosine-prote 99.7 4.5E-18 1.5E-22 136.1 2.7 52 12-63 33-91 (92)
35 3hho_A CO-chaperone protein HS 99.7 7E-18 2.4E-22 151.6 3.3 64 10-73 2-76 (174)
36 1n4c_A Auxilin; four helix bun 99.7 6.9E-18 2.4E-22 151.3 3.1 61 10-70 115-182 (182)
37 1fpo_A HSC20, chaperone protei 99.7 7.8E-18 2.7E-22 150.8 2.3 62 13-74 2-74 (171)
38 3bvo_A CO-chaperone protein HS 99.7 2.4E-17 8.2E-22 151.8 3.4 62 11-72 42-114 (207)
39 3apo_A DNAJ homolog subfamily 99.7 8.5E-18 2.9E-22 183.5 -0.2 90 8-100 17-110 (780)
40 3uo3_A J-type CO-chaperone JAC 99.6 4.2E-17 1.4E-21 147.1 3.3 64 10-73 9-80 (181)
41 1exk_A DNAJ protein; extended 99.5 9.9E-14 3.4E-18 108.2 7.3 77 134-217 1-78 (79)
42 1nlt_A Protein YDJ1, mitochond 99.2 2.7E-11 9.2E-16 114.6 8.1 52 220-271 190-246 (248)
43 2y4t_A DNAJ homolog subfamily 99.1 5.2E-11 1.8E-15 118.6 5.3 62 11-72 381-449 (450)
44 2guz_B Mitochondrial import in 99.0 1.4E-10 4.8E-15 86.5 4.5 51 13-63 5-58 (65)
45 3i38_A Putative chaperone DNAJ 98.7 1E-08 3.6E-13 84.6 4.7 52 221-273 40-91 (109)
46 1xao_A YDJ1, mitochondrial pro 98.5 4.4E-08 1.5E-12 82.3 4.4 54 220-273 35-93 (121)
47 1c3g_A Heat shock protein 40; 98.4 4E-07 1.4E-11 81.0 6.6 71 270-343 2-80 (170)
48 2q2g_A HSP40 protein, heat sho 98.4 4.8E-07 1.6E-11 81.2 7.0 71 268-341 3-84 (180)
49 3lz8_A Putative chaperone DNAJ 98.3 4E-07 1.4E-11 89.3 5.8 74 265-341 137-223 (329)
50 3agx_A DNAJ homolog subfamily 98.3 1.1E-06 3.9E-11 78.9 8.0 72 268-343 2-86 (181)
51 3lcz_A YCZA, inhibitor of trap 97.7 5.6E-06 1.9E-10 58.8 0.5 33 184-218 6-38 (53)
52 1exk_A DNAJ protein; extended 97.6 2.1E-05 7.3E-10 60.5 2.7 46 142-200 26-77 (79)
53 2ctt_A DNAJ homolog subfamily 97.6 3.9E-05 1.3E-09 62.4 3.8 48 141-201 42-95 (104)
54 3pmq_A Decaheme cytochrome C M 97.5 8E-06 2.7E-10 86.5 -2.5 78 121-198 168-257 (669)
55 2bx9_A Anti-trap, AT, tryptoph 96.8 0.00075 2.6E-08 47.8 2.8 25 145-171 10-34 (53)
56 3lcz_A YCZA, inhibitor of trap 96.7 0.00085 2.9E-08 47.5 3.0 25 145-171 10-34 (53)
57 2bx9_A Anti-trap, AT, tryptoph 96.4 0.0013 4.3E-08 46.6 2.2 27 161-200 10-36 (53)
58 2pzi_A Probable serine/threoni 92.0 0.083 2.8E-06 56.2 3.6 47 10-60 627-675 (681)
59 1ltl_A DNA replication initiat 53.3 55 0.0019 30.3 9.1 35 161-200 135-169 (279)
60 2vl6_A SSO MCM N-TER, minichro 50.2 39 0.0013 31.1 7.5 64 187-257 168-235 (268)
61 3pmq_A Decaheme cytochrome C M 40.4 4.6 0.00016 42.7 -0.8 47 161-214 192-257 (669)
62 2bx2_L Ribonuclease E, RNAse E 38.4 7.2 0.00025 40.0 0.3 31 170-200 390-421 (517)
63 2qkd_A Zinc finger protein ZPR 34.9 22 0.00075 35.2 3.1 65 163-239 15-112 (404)
64 1ltl_A DNA replication initiat 33.6 38 0.0013 31.5 4.4 19 240-258 205-223 (279)
65 1qo8_A Flavocytochrome C3 fuma 29.5 6.7 0.00023 40.4 -1.8 66 146-213 14-86 (566)
66 1uzc_A Hypothetical protein FL 29.4 43 0.0015 24.5 3.2 52 22-73 10-65 (71)
67 3jt0_A Lamin-B1; structural ge 28.6 72 0.0025 26.7 4.9 39 282-321 51-89 (144)
68 2b7e_A PRE-mRNA processing pro 27.6 36 0.0012 24.1 2.4 47 27-73 3-55 (59)
69 1y0p_A Fumarate reductase flav 27.4 7.1 0.00024 40.2 -2.0 65 146-212 13-88 (571)
70 3vdz_A Ubiquitin-40S ribosomal 26.0 59 0.002 25.5 3.8 40 267-306 14-56 (111)
71 2pk2_A Cyclin-T1, protein TAT; 25.7 49 0.0017 32.0 3.8 39 11-55 218-256 (358)
72 2vf7_A UVRA2, excinuclease ABC 24.6 30 0.001 37.6 2.2 33 162-198 640-672 (842)
73 2jne_A Hypothetical protein YF 23.0 58 0.002 25.5 2.9 42 144-199 32-73 (101)
74 2rq5_A Protein jumonji; develo 23.0 24 0.00083 28.7 0.8 41 14-72 69-111 (121)
75 1gmu_A UREE; metallochaperone; 21.8 1.4E+02 0.0049 24.7 5.5 45 273-318 16-60 (143)
76 1sif_A Ubiquitin; hydrophobic 21.3 71 0.0024 23.7 3.2 25 282-306 6-30 (88)
77 1mli_A Muconolactone isomerase 21.0 97 0.0033 24.1 3.9 21 334-354 4-24 (96)
78 2r6f_A Excinuclease ABC subuni 20.3 49 0.0017 36.5 2.8 32 162-197 755-786 (972)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.7e-67 Score=519.64 Aligned_cols=279 Identities=28% Similarity=0.419 Sum_probs=158.1
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHcCCccccccccccccccccccCC---
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMG--- 83 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~---~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~g~~--- 83 (416)
..+|||++|||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.+|+.||+|+..+...+++
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~ 105 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR 105 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence 45799999999999999999999999999999999875 489999999999999999999999995443211111
Q ss_pred ----CCCCCCCcccccccccCCCCCCCCCCCccccccCcceeeeeEeeeeeeecCceeeecceeeeeccccccCCcccCc
Q 014903 84 ----GGAGAHDPFDIFSSFFGGSPFGGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGA 159 (416)
Q Consensus 84 ----gg~~~~d~~diF~~fFGg~~~~g~~~~~~~~~~~~di~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~ 159 (416)
++++..++.|||++|||++++++ +.++++++.|+.+.|.|||+|+|+|+++++.+++.+.|
T Consensus 106 ~~~~~~f~~~~f~diF~~~Fg~~g~~~---~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~------------ 170 (329)
T 3lz8_A 106 QTHEQSYSQQDFDDIFSSMFGQQAHQR---RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN------------ 170 (329)
T ss_dssp ----------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC------------
T ss_pred ccccCCcCCCchhhhhHhhhcCcCCCC---CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec------------
Confidence 11112356689999998532211 12235689999999999999999999999999876532
Q ss_pred eeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceEEcCCCCCCCCCCCcEEEEeEEEEEEEcCCCccCCeEeecC
Q 014903 160 SMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGDKVVQEKKVLEVIVEKGMQNGQKITFPG 239 (416)
Q Consensus 160 ~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g 239 (416)
|.| . ..+...+.++|.||||+++|++|+|+|
T Consensus 171 --------g~G---------------------------~--------------v~~~~~~~l~V~IP~Gv~~G~~Irl~G 201 (329)
T 3lz8_A 171 --------VFG---------------------------M--------------IESETPKTLNVKIPAGVVDGQRIRLKG 201 (329)
T ss_dssp --------SCC------------------------------------------CCEEEEEEEEEEECTTCCTTCEEEESS
T ss_pred --------CCe---------------------------E--------------EEEecceEEEEeCCCCCCCCCEEEEcc
Confidence 112 1 122335689999999999999999999
Q ss_pred CcCCCC-CCCcccEEEEEEEecCCCccccccccccccccCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCC
Q 014903 240 EADEAP-DTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINE 318 (416)
Q Consensus 240 ~G~~~~-~~~~GDliv~i~~~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g 318 (416)
+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+| ++||++++|+|
T Consensus 202 ~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl~G 278 (329)
T 3lz8_A 202 QGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKG 278 (329)
T ss_dssp CSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETT
T ss_pred cccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEEcC
Confidence 999864 678999999999999999999999999999999999999999999999998 68999998 79999999999
Q ss_pred CCccCCCCCCCCCCeEEEEEEECCCCCCHHHHHHHHHHCC
Q 014903 319 EGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILP 358 (416)
Q Consensus 319 ~GmP~~~~~~~~GdL~v~~~V~fP~~l~~~~~~~L~~~lp 358 (416)
+|||.. ..+|||||+|+|+||++|+++|+++|+++..
T Consensus 279 ~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 279 KGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp CSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999975 3699999999999999999999999999865
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=3.2e-64 Score=479.01 Aligned_cols=240 Identities=45% Similarity=0.881 Sum_probs=220.2
Q ss_pred ccccCcceeeeeEeeeeeeecCceeeecceeeeeccccccCCcccCceeeCCCCccccEEEEEEecCCcceeeeeeeCCC
Q 014903 113 RQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNE 192 (416)
Q Consensus 113 ~~~~~~di~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~ 192 (416)
+++++.|+.+.|+|||||+|+|+++++.+++.+.|++|+|+|++.++..+|+.|+|+|+++..+++|| |+++++++|+.
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999888789999999999999999999 99999999999
Q ss_pred CCCCceEEcCCCCCCCCCCCcEEEEeEEEEEEEcCCCccCCeEeecCCcCCCCCCCcccEEEEEEEecCCCccccccccc
Q 014903 193 CKGTGETINDKDRCPQCKGDKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLF 272 (416)
Q Consensus 193 C~G~G~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~~~~h~~f~R~G~DL~ 272 (416)
|+|+|+++..+++|+.|+|++++.+.+.|+|+||||+++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 99999999888999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred cccccCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEEEECCCC--CCHHHH
Q 014903 273 YEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQV 350 (416)
Q Consensus 273 ~~~~I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~V~fP~~--l~~~~~ 350 (416)
++++|||+|||+|+++.|+||||+.+.|++|+|++++||++++|+|+|||..+++ .+|||||+|+|+||++ ||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 9999999999999999999999998999999999999999999999999987555 6899999999999999 999998
Q ss_pred HHHH
Q 014903 351 KALE 354 (416)
Q Consensus 351 ~~L~ 354 (416)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 8874
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2.5e-47 Score=346.23 Aligned_cols=180 Identities=38% Similarity=0.688 Sum_probs=160.4
Q ss_pred CcceeeeeEeeeeeeecCceeeecceeeeeccccccCCcccCceeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCC
Q 014903 117 GEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGT 196 (416)
Q Consensus 117 ~~di~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 196 (416)
++|+.+.|+|||||+|+|+++++.+++
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------------------------- 28 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------------------------- 28 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence 368899999999999999999986542
Q ss_pred ceEEcCCCCCCCCCCCcEEEEeEEEEEEEcCCCccCCeEeecCCcCCCCCCCcccEEEEEEEecCCCccccccccccccc
Q 014903 197 GETINDKDRCPQCKGDKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHT 276 (416)
Q Consensus 197 G~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~~~~h~~f~R~G~DL~~~~~ 276 (416)
+|+.|+|++++.+.+.++|+||||+++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 29 --------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (181)
T 3agx_A 29 --------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR 100 (181)
T ss_dssp --------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred --------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence 123344444566789999999999999999999999999888899999999999999999999999999999
Q ss_pred cCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEEEECCCCCCHHHHHHHHHH
Q 014903 277 LSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAI 356 (416)
Q Consensus 277 I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~V~fP~~l~~~~~~~L~~~ 356 (416)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+++
T Consensus 101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~ 178 (181)
T 3agx_A 101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178 (181)
T ss_dssp EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHH
T ss_pred cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHh
Confidence 99999999999999999999889999877 8999999999999998765667899999999999999999999999999
Q ss_pred CCC
Q 014903 357 LPS 359 (416)
Q Consensus 357 lp~ 359 (416)
||+
T Consensus 179 ~~~ 181 (181)
T 3agx_A 179 LPI 181 (181)
T ss_dssp SCC
T ss_pred ccC
Confidence 973
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-45 Score=335.48 Aligned_cols=178 Identities=39% Similarity=0.670 Sum_probs=164.5
Q ss_pred cCcceeeeeEeeeeeeecCceeeecceeeeeccccccCCcccCceeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCC
Q 014903 116 RGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKG 195 (416)
Q Consensus 116 ~~~di~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 195 (416)
++.|+.+.|.|||||+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3679999999999999999999999999888731
Q ss_pred CceEEcCCCCCCCCCCCcEEEEeEEEEEEEcCCCccCCeEeecCCcCC-CCCCCcccEEEEEEEecCCCccccccccccc
Q 014903 196 TGETINDKDRCPQCKGDKVVQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGEDLFYE 274 (416)
Q Consensus 196 ~G~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i~~~~h~~f~R~G~DL~~~ 274 (416)
+++.+.+.++|+||||+++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++
T Consensus 36 -----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~ 98 (180)
T 2q2g_A 36 -----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMK 98 (180)
T ss_dssp -----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEE
T ss_pred -----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEE
Confidence 2455678999999999999999999999999 7899999999999999999999999999999
Q ss_pred cccCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEEEECCCCCCHHHHHHHH
Q 014903 275 HTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 354 (416)
Q Consensus 275 ~~I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~V~fP~~l~~~~~~~L~ 354 (416)
++|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+
T Consensus 99 ~~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 176 (180)
T 2q2g_A 99 VTIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK 176 (180)
T ss_dssp EEEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred EEcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence 9999999999999999999999889999887 89999999999999987666679999999999999999999999999
Q ss_pred HHCC
Q 014903 355 AILP 358 (416)
Q Consensus 355 ~~lp 358 (416)
++||
T Consensus 177 ~~~p 180 (180)
T 2q2g_A 177 EALD 180 (180)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=3.9e-42 Score=309.14 Aligned_cols=169 Identities=34% Similarity=0.596 Sum_probs=153.3
Q ss_pred cceeeeeEeeeeeeecCceeeecceeeeeccccccCCcccCceeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCc
Q 014903 118 EDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTG 197 (416)
Q Consensus 118 ~di~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 197 (416)
+|+.+.|.|||+|+|+|+++++.+++.. + .
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~------~----------------~---------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG------P----------------H---------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE------T----------------T----------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec------C----------------C----------------------------
Confidence 4789999999999999999999887651 0 0
Q ss_pred eEEcCCCCCCCCCCCcEEEEeEEEEEEEcCCCccCCeEeecCCcCC-CCCCCcccEEEEEEEecCCCccccccccccccc
Q 014903 198 ETINDKDRCPQCKGDKVVQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHT 276 (416)
Q Consensus 198 ~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i~~~~h~~f~R~G~DL~~~~~ 276 (416)
|.+ +.+.++|+||||+++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~ 94 (170)
T 1c3g_A 31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94 (170)
T ss_dssp ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence 123 568899999999999999999999994 788899999999999999999999999999999
Q ss_pred cCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEEEECCCCCCHHHHHHHH
Q 014903 277 LSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALE 354 (416)
Q Consensus 277 I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~V~fP~~l~~~~~~~L~ 354 (416)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++||++|+++|+
T Consensus 95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999999999999889999887 89999999999999987666678999999999999999999988763
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.7e-29 Score=212.92 Aligned_cols=118 Identities=37% Similarity=0.615 Sum_probs=101.8
Q ss_pred CccccccccccccccCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEEEECC
Q 014903 263 KFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFP 342 (416)
Q Consensus 263 ~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~V~fP 342 (416)
.|+|+|+||+++++|||+|||+|+++.|+||||+.+.|++|+|+|++||++++|+|+|||..+++ .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 49999999999999999999999999999999998999999999999999999999999987655 68999999999999
Q ss_pred CC--CCHHHHHHHHHHCCCCCCCCCCCCCccccceeeeecCCh
Q 014903 343 DS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNI 383 (416)
Q Consensus 343 ~~--l~~~~~~~L~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (416)
++ |+++|+++|+++++.+.. .. ....+++|++.|.++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~~-~~-~~~~~~~ee~~~~~~~~ 120 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRIV-PA-IPKKATVDECVLADFDP 120 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCCC-CC-CCTTSCEEEEECEECCC
T ss_pred CCCCCCHHHHHHHHHHcccccc-cC-CCCCCCceEEEeeccCC
Confidence 99 999999999999987653 11 23457788888988875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=2e-26 Score=191.58 Aligned_cols=95 Identities=19% Similarity=0.300 Sum_probs=88.0
Q ss_pred ecCCCccccccccccccccCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEE
Q 014903 259 KEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFT 338 (416)
Q Consensus 259 ~~h~~f~R~G~DL~~~~~I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~ 338 (416)
++|+.|+|+|+||+++++|||.|||+|+++.|+||||. +.|+||+| ++||++++|+|+|||.. . .+|||||+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~--~-~~GDL~v~~~ 75 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK--T-HTGDLFAVIK 75 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS--S-CBCCEEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC--C-CCcCEEEEEE
Confidence 68999999999999999999999999999999999995 89999999 89999999999999973 2 6999999999
Q ss_pred EECCCCCCHHHHHHHHHHCCC
Q 014903 339 VEFPDSLTPDQVKALEAILPS 359 (416)
Q Consensus 339 V~fP~~l~~~~~~~L~~~lp~ 359 (416)
|+||++|+++|+++|++++..
T Consensus 76 V~~P~~Ls~~q~~~l~~l~~~ 96 (109)
T 3i38_A 76 IVMPTKPDEKARELWQQLAAA 96 (109)
T ss_dssp ECCCSSCCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999853
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.90 E-value=7e-25 Score=180.78 Aligned_cols=90 Identities=52% Similarity=0.897 Sum_probs=66.3
Q ss_pred CcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCccccccccccccccccccCCCCC
Q 014903 11 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGA 86 (416)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~g~~gg~ 86 (416)
..+||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|+.++..+..+++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~ 81 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 81 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence 3689999999999999999999999999999999874 379999999999999999999999999988775321111
Q ss_pred ---CCCCcccccccccC
Q 014903 87 ---GAHDPFDIFSSFFG 100 (416)
Q Consensus 87 ---~~~d~~diF~~fFG 100 (416)
++.++.++|+.||+
T Consensus 82 ~~~~~~~~~~~f~~~f~ 98 (103)
T 1bq0_A 82 GFGGGADFSDIFGDVFG 98 (103)
T ss_dssp -----------------
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 12245577777776
No 9
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.88 E-value=1.6e-23 Score=161.71 Aligned_cols=71 Identities=56% Similarity=0.896 Sum_probs=63.1
Q ss_pred CCCCCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-hHHHHHHHHHHHHcCCccccccccccccc
Q 014903 6 PKKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-PEKFKELAQAYEVLSDPEKREIYDQYGED 76 (416)
Q Consensus 6 ~~~~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~-~~~F~~i~~AYevLsd~~kR~~YD~~G~~ 76 (416)
..|+...+||+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|++
T Consensus 2 ~~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 2 NAMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp ----CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CcccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 357788999999999999999999999999999999999986 59999999999999999999999999863
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.88 E-value=3.5e-23 Score=161.50 Aligned_cols=70 Identities=54% Similarity=1.022 Sum_probs=65.5
Q ss_pred CcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHcCCccccccccccccccccc
Q 014903 11 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 80 (416)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~---~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~ 80 (416)
..|||+||||+++||.+|||+|||+||++||||++++ .+.|++|++||++|+||.+|+.||++|.+++.+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 4689999999999999999999999999999999875 389999999999999999999999999988764
No 11
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.3e-23 Score=168.08 Aligned_cols=75 Identities=53% Similarity=0.918 Sum_probs=69.0
Q ss_pred CCCCCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-ChHHHHHHHHHHHHcCCccccccccccccccccc
Q 014903 6 PKKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGG-DPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 80 (416)
Q Consensus 6 ~~~~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~-~~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~ 80 (416)
..|+...+||+||||+++||.+|||+|||+|+++||||+++ +.++|++|++||+||+||.+|+.||++|.+++..
T Consensus 2 ~~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 2 NAMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp --CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred cccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 35677889999999999999999999999999999999996 4689999999999999999999999999988875
No 12
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1.3e-22 Score=162.33 Aligned_cols=72 Identities=49% Similarity=0.835 Sum_probs=66.9
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHcCCcccccccccccccccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 81 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~---~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~g 81 (416)
...+||+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||.+|..++.++
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 34699999999999999999999999999999999987 3799999999999999999999999999887643
No 13
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.7e-22 Score=159.43 Aligned_cols=71 Identities=52% Similarity=0.872 Sum_probs=64.9
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHHHcCCcccccccccccccccc
Q 014903 9 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-----EKFKELAQAYEVLSDPEKREIYDQYGEDALK 79 (416)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~~-----~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~ 79 (416)
....+||+||||+++||.+|||+|||+|+++||||++++. ++|++|++||++|+||.+|+.||++|+.++.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 3457999999999999999999999999999999999863 6999999999999999999999999986643
No 14
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=2.2e-22 Score=157.69 Aligned_cols=68 Identities=54% Similarity=0.864 Sum_probs=63.3
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCcccccccccccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDA 77 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g 77 (416)
...+||+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 35699999999999999999999999999999999975 389999999999999999999999999754
No 15
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.4e-22 Score=157.13 Aligned_cols=68 Identities=57% Similarity=0.933 Sum_probs=63.7
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHcCCcccccccccccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDA 77 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~---~~~F~~i~~AYevLsd~~kR~~YD~~G~~g 77 (416)
...+||+||||+++||.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 45799999999999999999999999999999999975 389999999999999999999999999754
No 16
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=4.5e-22 Score=160.51 Aligned_cols=71 Identities=52% Similarity=0.856 Sum_probs=65.7
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----hHHHHHHHHHHHHcCCccccccccccccccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 80 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~-----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~ 80 (416)
...+||+||||+++|+.+|||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||++|..++..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 34699999999999999999999999999999999975 279999999999999999999999999887764
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=4.8e-22 Score=159.03 Aligned_cols=69 Identities=48% Similarity=0.779 Sum_probs=64.0
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHcCCcccccccccccccc
Q 014903 9 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDA 77 (416)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~---~~~F~~i~~AYevLsd~~kR~~YD~~G~~g 77 (416)
....|||+||||+++|+.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||++|+..
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 356799999999999999999999999999999999975 389999999999999999999999999753
No 18
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=4.8e-22 Score=166.16 Aligned_cols=72 Identities=31% Similarity=0.592 Sum_probs=66.4
Q ss_pred CCCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCcccccccccccccccc
Q 014903 8 KSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALK 79 (416)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~ 79 (416)
+....|||+||||+++|+.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 3456899999999999999999999999999999999984 48999999999999999999999999987654
No 19
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.84 E-value=3.8e-22 Score=163.02 Aligned_cols=69 Identities=59% Similarity=0.984 Sum_probs=62.1
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHHHcCCccccccccccccccccc
Q 014903 12 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-----EKFKELAQAYEVLSDPEKREIYDQYGEDALKE 80 (416)
Q Consensus 12 ~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~~-----~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~ 80 (416)
+|||+||||+++||.+|||+|||+||++||||++++. ++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999752 79999999999999999999999999887763
No 20
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=2.1e-21 Score=158.75 Aligned_cols=65 Identities=34% Similarity=0.609 Sum_probs=60.8
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCcccccccccc
Q 014903 9 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQY 73 (416)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~ 73 (416)
+...+||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 456799999999999999999999999999999999974 48999999999999999999999984
No 21
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.6e-21 Score=162.27 Aligned_cols=71 Identities=46% Similarity=0.834 Sum_probs=66.1
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCcccccccccccccccc
Q 014903 9 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALK 79 (416)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~ 79 (416)
....+||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 456799999999999999999999999999999999985 48999999999999999999999999987764
No 22
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=3.8e-21 Score=158.64 Aligned_cols=101 Identities=26% Similarity=0.575 Sum_probs=89.7
Q ss_pred cceeeeeEeeeeeeecCceeeecceeeeeccccccCCcccCce-eeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCC
Q 014903 118 EDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGAS-MKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGT 196 (416)
Q Consensus 118 ~di~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 196 (416)
.++.++|+|||||+|+|+++++.+.+.+.|+.|+|+|.++++. .+|+.|+|+|++...+ |+ .+++.+|+.|+|+
T Consensus 2 ~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~---~~~~~~C~~C~G~ 76 (104)
T 2ctt_A 2 SSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP---FVMRSTCRRCGGR 76 (104)
T ss_dssp CCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT---EEEEEECSSSSSS
T ss_pred CceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC---EEEEEECCcCCCc
Confidence 4778999999999999999999999999999999999988764 7899999999876543 54 3467899999999
Q ss_pred ceEEcCCCCCCCCCCCcEEEEeEEEEEEE
Q 014903 197 GETINDKDRCPQCKGDKVVQEKKVLEVIV 225 (416)
Q Consensus 197 G~~~~~~~~C~~C~G~g~v~~~~~l~V~I 225 (416)
|+++. ++|+.|+|.+++.+.+.|+|+|
T Consensus 77 G~~i~--~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 77 GSIII--SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred ceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence 99985 8999999999999999988865
No 23
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.82 E-value=3.1e-21 Score=156.17 Aligned_cols=68 Identities=34% Similarity=0.596 Sum_probs=62.1
Q ss_pred CCCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------hHHHHHHHHHHHHcCCcccccccccccc
Q 014903 8 KSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----------PEKFKELAQAYEVLSDPEKREIYDQYGE 75 (416)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----------~~~F~~i~~AYevLsd~~kR~~YD~~G~ 75 (416)
++...+||+||||+++||.+|||+|||+||++||||+++. .++|++|++||+||+||.+|+.||.+..
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 3456799999999999999999999999999999999863 2799999999999999999999998653
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.80 E-value=2.7e-21 Score=161.61 Aligned_cols=65 Identities=32% Similarity=0.549 Sum_probs=62.3
Q ss_pred CcCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHcCCcccccccccccc
Q 014903 11 NTRYYEILGVSKNASA--EDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 75 (416)
Q Consensus 11 ~~~~Y~iLgv~~~As~--~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYevLsd~~kR~~YD~~G~ 75 (416)
..+||+||||+++|+. +|||+|||+||++||||+++++++|++|++||+||+||.+|+.||.||.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 3589999999999999 9999999999999999999999999999999999999999999999875
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.80 E-value=1e-20 Score=148.06 Aligned_cols=65 Identities=23% Similarity=0.400 Sum_probs=60.4
Q ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHcCCcccccccccccccc
Q 014903 12 TRYYEILGVSKN--ASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDA 77 (416)
Q Consensus 12 ~~~Y~iLgv~~~--As~~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYevLsd~~kR~~YD~~G~~g 77 (416)
.++|+||||+++ ||.+|||+|||+||++||||+++++++|++|++||++|+|+.+|.. |.||..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 579999999999 9999999999999999999999999999999999999999999987 5677644
No 26
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.80 E-value=1.4e-20 Score=173.65 Aligned_cols=86 Identities=41% Similarity=0.778 Sum_probs=71.8
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCccccccccccccccccccCCCCCC
Q 014903 12 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 87 (416)
Q Consensus 12 ~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~g~~gg~~ 87 (416)
.|||++|||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||+||+.++..+.+ +
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~---~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQG---G 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTCS---C
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccccc---c
Confidence 589999999999999999999999999999999964 379999999999999999999999999988764321 1
Q ss_pred CCCcccccccccC
Q 014903 88 AHDPFDIFSSFFG 100 (416)
Q Consensus 88 ~~d~~diF~~fFG 100 (416)
....+.+|...||
T Consensus 79 ~~~~~~~~~~~fg 91 (210)
T 3apq_A 79 QYESWSYYRYDFG 91 (210)
T ss_dssp CCCCHHHHHHSSS
T ss_pred ccccccccccccc
Confidence 2233455555554
No 27
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.79 E-value=1.3e-20 Score=156.75 Aligned_cols=69 Identities=35% Similarity=0.601 Sum_probs=63.7
Q ss_pred CCCCcCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------hHHHHHHHHHHHHcCCccccccccccccc
Q 014903 8 KSNNTRYYEILGVSKNA-SAEDLKKAYKKAAIKNHPDKGGD-------PEKFKELAQAYEVLSDPEKREIYDQYGED 76 (416)
Q Consensus 8 ~~~~~~~Y~iLgv~~~A-s~~eIk~Ayrkla~k~HPDk~~~-------~~~F~~i~~AYevLsd~~kR~~YD~~G~~ 76 (416)
+....+||+||||+++| |.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||+++..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34567999999999999 99999999999999999999986 38999999999999999999999998853
No 28
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.79 E-value=6.5e-21 Score=169.96 Aligned_cols=65 Identities=32% Similarity=0.542 Sum_probs=59.5
Q ss_pred CcCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHcCCcccccccccccc
Q 014903 11 NTRYYEILGVSKNAS--AEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 75 (416)
Q Consensus 11 ~~~~Y~iLgv~~~As--~~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYevLsd~~kR~~YD~~G~ 75 (416)
..+||++|||+++|| .+|||+|||+||++||||+++++++|++|++||+||+||.+|+.||+||.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999999 69999999999999999999999999999999999999999999999995
No 29
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=9.4e-20 Score=146.26 Aligned_cols=60 Identities=33% Similarity=0.478 Sum_probs=55.9
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHcCCcccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREI 69 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~---~~~F~~i~~AYevLsd~~kR~~ 69 (416)
...|||+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 45799999999999999999999999999999999965 4899999999999999999874
No 30
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=2.2e-19 Score=158.57 Aligned_cols=66 Identities=35% Similarity=0.599 Sum_probs=61.0
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHHHHHcCCcccccccccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----------EKFKELAQAYEVLSDPEKREIYDQYGE 75 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~~----------~~F~~i~~AYevLsd~~kR~~YD~~G~ 75 (416)
...|||+||||+++||.+|||+|||+||++|||||+++. ++|++|++||+||+||.+|+.||.++.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 457999999999999999999999999999999998642 799999999999999999999998664
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.74 E-value=7.7e-19 Score=134.60 Aligned_cols=59 Identities=27% Similarity=0.462 Sum_probs=54.8
Q ss_pred CCcCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHcCCccccc
Q 014903 10 NNTRYYEILGVSK-NASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKRE 68 (416)
Q Consensus 10 ~~~~~Y~iLgv~~-~As~~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYevLsd~~kR~ 68 (416)
...++|+||||++ +||.+|||+|||+||++||||+++++++|++|++||++|+|+..|+
T Consensus 12 ~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp CHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence 3468999999999 7999999999999999999999999999999999999999987763
No 32
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.72 E-value=7.6e-19 Score=140.05 Aligned_cols=61 Identities=21% Similarity=0.228 Sum_probs=55.2
Q ss_pred CCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----hHHHHHHHHHHHHcCCcccccc
Q 014903 9 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREI 69 (416)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~-----~~~F~~i~~AYevLsd~~kR~~ 69 (416)
....++|+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+|...|..
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 345689999999999999999999999999999999986 3899999999999999877743
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.70 E-value=2.4e-18 Score=141.95 Aligned_cols=57 Identities=18% Similarity=0.289 Sum_probs=51.3
Q ss_pred CCCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----------hHHHHHHHHHHHHcCCcc
Q 014903 8 KSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-----------PEKFKELAQAYEVLSDPE 65 (416)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~-----------~~~F~~i~~AYevLsd~~ 65 (416)
.+...|||++||++. ||.+|||+|||+||++||||||++ +++|++|++||+||||+.
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 445679999999996 999999999999999999999752 479999999999999986
No 34
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.69 E-value=4.5e-18 Score=136.12 Aligned_cols=52 Identities=27% Similarity=0.450 Sum_probs=48.1
Q ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------hHHHHHHHHHHHHcCC
Q 014903 12 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-------PEKFKELAQAYEVLSD 63 (416)
Q Consensus 12 ~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~-------~~~F~~i~~AYevLsd 63 (416)
.++|++|||+++||.+|||+|||+||++||||||++ +++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999875 2589999999999964
No 35
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.68 E-value=7e-18 Score=151.56 Aligned_cols=64 Identities=23% Similarity=0.443 Sum_probs=58.0
Q ss_pred CCcCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHcCCcccccccccc
Q 014903 10 NNTRYYEILGVSKNAS--AEDLKKAYKKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQY 73 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As--~~eIk~Ayrkla~k~HPDk~~~~---------~~F~~i~~AYevLsd~~kR~~YD~~ 73 (416)
...|||++|||+++|+ .++||+|||+|+++||||++++. ++|+.|++||+||+||.+|+.||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3569999999999998 99999999999999999998742 6899999999999999999999973
No 36
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.68 E-value=6.9e-18 Score=151.32 Aligned_cols=61 Identities=26% Similarity=0.500 Sum_probs=56.5
Q ss_pred CCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------hHHHHHHHHHHHHcCCccccccc
Q 014903 10 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD-------PEKFKELAQAYEVLSDPEKREIY 70 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~-------~~~F~~i~~AYevLsd~~kR~~Y 70 (416)
...+||++|||+++||.+|||+|||+||++|||||+++ .++|++|++||+||+|+.+|+.|
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 34699999999999999999999999999999999864 25999999999999999999988
No 37
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.67 E-value=7.8e-18 Score=150.76 Aligned_cols=62 Identities=21% Similarity=0.354 Sum_probs=58.0
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHcCCccccccccccc
Q 014903 13 RYYEILGVSKNA--SAEDLKKAYKKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQYG 74 (416)
Q Consensus 13 ~~Y~iLgv~~~A--s~~eIk~Ayrkla~k~HPDk~~~~---------~~F~~i~~AYevLsd~~kR~~YD~~G 74 (416)
|||++|||+++| |.++||+|||+|+++||||++++. ++|+.|++||+||+||.+|+.||.+-
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 999999999999999999998752 58999999999999999999999853
No 38
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.66 E-value=2.4e-17 Score=151.82 Aligned_cols=62 Identities=19% Similarity=0.372 Sum_probs=57.1
Q ss_pred CcCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHHHcCCccccccccc
Q 014903 11 NTRYYEILGVSKN--ASAEDLKKAYKKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQ 72 (416)
Q Consensus 11 ~~~~Y~iLgv~~~--As~~eIk~Ayrkla~k~HPDk~~~~---------~~F~~i~~AYevLsd~~kR~~YD~ 72 (416)
..|||++|||+++ |+.++||+|||+|+++||||++++. ++|++|++||+||+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5699999999986 7999999999999999999998741 579999999999999999999995
No 39
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.65 E-value=8.5e-18 Score=183.48 Aligned_cols=90 Identities=39% Similarity=0.751 Sum_probs=45.0
Q ss_pred CCCCcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHHHcCCccccccccccccccccccCC
Q 014903 8 KSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMG 83 (416)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~----~~~F~~i~~AYevLsd~~kR~~YD~~G~~g~~~g~~ 83 (416)
.....|||++|||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+||.+|+.||+||++++..+.+
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~~ 96 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQG 96 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCCC
Confidence 3456799999999999999999999999999999999864 379999999999999999999999999988875432
Q ss_pred CCCCCCCcccccccccC
Q 014903 84 GGAGAHDPFDIFSSFFG 100 (416)
Q Consensus 84 gg~~~~d~~diF~~fFG 100 (416)
+ ....+++|...||
T Consensus 97 ~---~~~~~~~~~~~fg 110 (780)
T 3apo_A 97 G---QYESWSYYRYDFG 110 (780)
T ss_dssp ----------CCSSSSS
T ss_pred C---Ccccccccchhhc
Confidence 1 2233455665565
No 40
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.64 E-value=4.2e-17 Score=147.14 Aligned_cols=64 Identities=28% Similarity=0.511 Sum_probs=58.5
Q ss_pred CCcCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCC-ChHHHHHHHHHHHHcCCcccccccccc
Q 014903 10 NNTRYYEIL------GVSK-NASAEDLKKAYKKAAIKNHPDKGG-DPEKFKELAQAYEVLSDPEKREIYDQY 73 (416)
Q Consensus 10 ~~~~~Y~iL------gv~~-~As~~eIk~Ayrkla~k~HPDk~~-~~~~F~~i~~AYevLsd~~kR~~YD~~ 73 (416)
..+|||++| |+.+ +||.++||+|||+||++||||+++ ..++|++|++||+||+||.+|+.||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 346999999 4655 999999999999999999999998 468999999999999999999999984
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.46 E-value=9.9e-14 Score=108.18 Aligned_cols=77 Identities=30% Similarity=0.755 Sum_probs=65.5
Q ss_pred CceeeecceeeeeccccccCCcccCce-eeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceEEcCCCCCCCCCCC
Q 014903 134 GTSKKLSLSRNVICSKCSGKGSKSGAS-MKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGD 212 (416)
Q Consensus 134 G~~~~~~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~ 212 (416)
|++++|.+++.+.|+.|+|+|...... .+|+.|+|+|.++..+ |++ +++.+|+.|+|+|.++. ++|+.|+|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~ 73 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFF-AVQQTCPHCQGRGTLIK--DPCNKCHGH 73 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCC-EEeeECcCCCCccEECC--CcCCCCCCe
Confidence 677889999999999999999876554 6899999999876533 454 47889999999999874 899999999
Q ss_pred cEEEE
Q 014903 213 KVVQE 217 (416)
Q Consensus 213 g~v~~ 217 (416)
+++.+
T Consensus 74 G~~~~ 78 (79)
T 1exk_A 74 GRVER 78 (79)
T ss_dssp SEEEC
T ss_pred EEEee
Confidence 98864
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.19 E-value=2.7e-11 Score=114.63 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=37.9
Q ss_pred EEEEEEcCC--CccCCeEeecCCcCCCCC-CCcccEEEEEEEecCCC--cccccccc
Q 014903 220 VLEVIVEKG--MQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPK--FKRKGEDL 271 (416)
Q Consensus 220 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~~-~~~GDliv~i~~~~h~~--f~R~G~DL 271 (416)
.+.|.||+| +++|++++|+|+|.+... ...|||||+|+|.-+.. ++.+...|
T Consensus 190 ~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 190 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 699999999 999999999999998543 26799999999987765 55544333
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.09 E-value=5.2e-11 Score=118.64 Aligned_cols=62 Identities=47% Similarity=0.775 Sum_probs=53.5
Q ss_pred CcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHHHcCCccccccccc
Q 014903 11 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-------EKFKELAQAYEVLSDPEKREIYDQ 72 (416)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~~-------~~F~~i~~AYevLsd~~kR~~YD~ 72 (416)
..++|.+||+.+.++.++|+++|+++|+++|||+.+++ ++|++|++||++|+|++||+.||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35899999999999999999999999999999998763 599999999999999999999997
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=1.4e-10 Score=86.47 Aligned_cols=51 Identities=18% Similarity=0.198 Sum_probs=47.6
Q ss_pred CcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHcCC
Q 014903 13 RYYEILGVSKN---ASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSD 63 (416)
Q Consensus 13 ~~Y~iLgv~~~---As~~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYevLsd 63 (416)
+-|.||||+++ |+.++|++|||+|....|||+++++-.+.+|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45889999999 9999999999999999999999999999999999999953
No 45
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.70 E-value=1e-08 Score=84.56 Aligned_cols=52 Identities=25% Similarity=0.357 Sum_probs=44.0
Q ss_pred EEEEEcCCCccCCeEeecCCcCCCCCCCcccEEEEEEEecCCCcccccccccc
Q 014903 221 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFY 273 (416)
Q Consensus 221 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~~~~h~~f~R~G~DL~~ 273 (416)
++|.||+|+++|++++++|+|.+..+ .+|||||+|+|.-...++.+...|+-
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~ 91 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELWQ 91 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHHH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHHH
Confidence 67999999999999999999998754 78999999999988777666555543
No 46
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.55 E-value=4.4e-08 Score=82.32 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=41.8
Q ss_pred EEEEEEcCC--CccCCeEeecCCcCCCCCC-CcccEEEEEEEecCCC--cccccccccc
Q 014903 220 VLEVIVEKG--MQNGQKITFPGEADEAPDT-VTGDIVFVLQQKEHPK--FKRKGEDLFY 273 (416)
Q Consensus 220 ~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDliv~i~~~~h~~--f~R~G~DL~~ 273 (416)
.+.|.||+| +++|++++++|+|.+..+. ..|||||++++.-+.. ++.+..+|+.
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~ 93 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLE 93 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHH
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
Confidence 467999999 9999999999999985433 6799999999998776 7666655543
No 47
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.39 E-value=4e-07 Score=81.03 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=58.9
Q ss_pred ccccccccCHHHHhcCcEEEEecc----CC----cEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEEEEEEC
Q 014903 270 DLFYEHTLSLTEALCGFQFALTHL----DG----RQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEF 341 (416)
Q Consensus 270 DL~~~~~I~l~eAl~G~~~~i~tl----dG----~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~~~V~f 341 (416)
|+.+++.|||.||+.|+++.|..- +| +.+.|+||+| +..|+.++++|+|-+-. ..+..|||||.++|.-
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEKS 78 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCS-SSSCBCEEEEEEEECC
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCC-CCCccccEEEEEEEcc
Confidence 788999999999999998887532 23 7899999999 89999999999998643 2346899999999874
Q ss_pred CC
Q 014903 342 PD 343 (416)
Q Consensus 342 P~ 343 (416)
-+
T Consensus 79 h~ 80 (170)
T 1c3g_A 79 HP 80 (170)
T ss_dssp CS
T ss_pred CC
Confidence 33
No 48
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.38 E-value=4.8e-07 Score=81.23 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=58.9
Q ss_pred ccccccccccCHHHHhcCcEEEEecc-----------CCcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeEEE
Q 014903 268 GEDLFYEHTLSLTEALCGFQFALTHL-----------DGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIH 336 (416)
Q Consensus 268 G~DL~~~~~I~l~eAl~G~~~~i~tl-----------dG~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~v~ 336 (416)
|.|+.+++.|||.||+.|.++.|..- ..+.|.|.||+| +..|+.++++|+|-+... ....|||||.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~~-gg~~GDl~v~ 79 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQESP-GTSPGDLVLI 79 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSST-TSCCCEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCCC-CCccccEEEE
Confidence 77999999999999999998877632 246799999999 899999999999987221 3468999999
Q ss_pred EEEEC
Q 014903 337 FTVEF 341 (416)
Q Consensus 337 ~~V~f 341 (416)
++|.=
T Consensus 80 i~~~~ 84 (180)
T 2q2g_A 80 IQTKT 84 (180)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 99873
No 49
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.34 E-value=4e-07 Score=89.34 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=57.4
Q ss_pred cccccccccccccCHHHHhcCcEEEEecc------C-------CcEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCC
Q 014903 265 KRKGEDLFYEHTLSLTEALCGFQFALTHL------D-------GRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKG 331 (416)
Q Consensus 265 ~R~G~DL~~~~~I~l~eAl~G~~~~i~tl------d-------G~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~G 331 (416)
.++|.||.+++.|+|.||+.|.+..|..- . .+.|.|+||+| ++.|+.++++|+|.|... ....|
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~~-gg~~G 213 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGEN-GGPNG 213 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCC
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCCC-CCCCC
Confidence 35688888888888888888876655321 2 34688999999 899999999999998642 34689
Q ss_pred CeEEEEEEEC
Q 014903 332 KLYIHFTVEF 341 (416)
Q Consensus 332 dL~v~~~V~f 341 (416)
||||+++|.=
T Consensus 214 DL~v~I~v~~ 223 (329)
T 3lz8_A 214 DLWLVIHIAP 223 (329)
T ss_dssp CEEEEECCCC
T ss_pred cEEEEEEEec
Confidence 9999988763
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.32 E-value=1.1e-06 Score=78.86 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=57.1
Q ss_pred ccccccccccCHHHHhcCcEEEEec------cCC-------cEEEEEeCCCccccCCcEEEeCCCCccCCCCCCCCCCeE
Q 014903 268 GEDLFYEHTLSLTEALCGFQFALTH------LDG-------RQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLY 334 (416)
Q Consensus 268 G~DL~~~~~I~l~eAl~G~~~~i~t------ldG-------~~l~i~~~~g~vi~~g~~~~i~g~GmP~~~~~~~~GdL~ 334 (416)
+.|+.+++.|||.||+.|.++.|.- -.| +.|.|.||+| +..|+.++++|+|-+..+ +..||||
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~~--g~~GDl~ 77 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTSN--NIPADIV 77 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCSS--SCCCCEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCCC--CCcccEE
Confidence 5689999999999999999877652 235 6789999999 899999999999987653 4689999
Q ss_pred EEEEEECCC
Q 014903 335 IHFTVEFPD 343 (416)
Q Consensus 335 v~~~V~fP~ 343 (416)
|.++|.--+
T Consensus 78 v~i~~~~h~ 86 (181)
T 3agx_A 78 FVLKDKPHN 86 (181)
T ss_dssp EEEEECCCS
T ss_pred EEEEEeccc
Confidence 999987433
No 51
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.72 E-value=5.6e-06 Score=58.83 Aligned_cols=33 Identities=27% Similarity=0.843 Sum_probs=28.0
Q ss_pred eeeeeeCCCCCCCceEEcCCCCCCCCCCCcEEEEe
Q 014903 184 QQMQHPCNECKGTGETINDKDRCPQCKGDKVVQEK 218 (416)
Q Consensus 184 ~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~v~~~ 218 (416)
++++.+|+.|+|+|.++. ++|+.|+|+|++.+.
T Consensus 6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA 38 (53)
T ss_dssp HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence 457889999999999886 889999999987754
No 52
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.63 E-value=2.1e-05 Score=60.48 Aligned_cols=46 Identities=33% Similarity=0.850 Sum_probs=36.1
Q ss_pred eeeeeccccccCCcccC------ceeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceEE
Q 014903 142 SRNVICSKCSGKGSKSG------ASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 200 (416)
Q Consensus 142 ~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 200 (416)
.....|+.|+|+|.... ...+|+.|+|+|.+ +..+|+.|+|.|.+.
T Consensus 26 ~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-------------~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 26 TQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL-------------IKDPCNKCHGHGRVE 77 (79)
T ss_dssp SCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE-------------CSSBCGGGTTSSEEE
T ss_pred ccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE-------------CCCcCCCCCCeEEEe
Confidence 34578999999997542 12589999999942 357899999999874
No 53
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.59 E-value=3.9e-05 Score=62.37 Aligned_cols=48 Identities=27% Similarity=0.679 Sum_probs=37.0
Q ss_pred ceeeeeccccccCCcccC------ceeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceEEc
Q 014903 141 LSRNVICSKCSGKGSKSG------ASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 201 (416)
Q Consensus 141 ~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 201 (416)
-.....|+.|+|+|.... ...+|+.|+|+|. .+..+|+.|+|.|.+..
T Consensus 42 g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~-------------~i~~~C~~C~G~G~v~~ 95 (104)
T 2ctt_A 42 GTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGS-------------IIISPCVVCRGAGQAKQ 95 (104)
T ss_dssp TCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSE-------------ECSSCCSSSSSCSEECC
T ss_pred CCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcce-------------ECCCcCCCCCCeeEEEE
Confidence 334578999999996521 2368999999994 34679999999998764
No 54
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.46 E-value=8e-06 Score=86.50 Aligned_cols=78 Identities=13% Similarity=0.183 Sum_probs=57.1
Q ss_pred eeeeEeeeeeeecCceeeecceeeeeccccccCCcccCc----eeeCCCCccccEEE--------EEEecCCcceeeeee
Q 014903 121 VHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGA----SMKCSGCQGTGMKV--------SIRHLGPSMIQQMQH 188 (416)
Q Consensus 121 ~~~l~vsLee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~--------~~~~~gpg~~~~~~~ 188 (416)
.+.+.++|+|+..|..+++.+.+...|..|+|+|.+.+. ..+|+.|+|+.... ++..+=.|.+-+...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 468899999999999999999999999999999998875 47899999993110 000000012223356
Q ss_pred eCCCCCCCce
Q 014903 189 PCNECKGTGE 198 (416)
Q Consensus 189 ~C~~C~G~G~ 198 (416)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7999988764
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.77 E-value=0.00075 Score=47.79 Aligned_cols=25 Identities=40% Similarity=1.030 Sum_probs=11.7
Q ss_pred eeccccccCCcccCceeeCCCCccccE
Q 014903 145 VICSKCSGKGSKSGASMKCSGCQGTGM 171 (416)
Q Consensus 145 ~~C~~C~G~G~~~~~~~~C~~C~G~G~ 171 (416)
..|+.|+|+|.... .+|+.|+|+|.
T Consensus 10 ~~C~~C~GsG~~~~--~~C~~C~G~G~ 34 (53)
T 2bx9_A 10 VACPKCERAGEIEG--TPCPACSGKGV 34 (53)
T ss_dssp EECTTTTTSSEETT--EECTTTTTSSE
T ss_pred ccCCCCcceeccCC--CCCccCCCCcc
Confidence 34555555554432 34444444443
No 56
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.75 E-value=0.00085 Score=47.49 Aligned_cols=25 Identities=32% Similarity=0.938 Sum_probs=13.7
Q ss_pred eeccccccCCcccCceeeCCCCccccE
Q 014903 145 VICSKCSGKGSKSGASMKCSGCQGTGM 171 (416)
Q Consensus 145 ~~C~~C~G~G~~~~~~~~C~~C~G~G~ 171 (416)
..|+.|+|+|.... .+|+.|+|+|.
T Consensus 10 ~~C~~C~GsG~~i~--~~C~~C~G~G~ 34 (53)
T 3lcz_A 10 TTCPNCNGSGREEP--EPCPKCLGKGV 34 (53)
T ss_dssp EECTTTTTSCEETT--EECTTTTTSSE
T ss_pred ccCcCCcccccCCC--CcCCCCCCcEE
Confidence 45666666665432 44555555554
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.45 E-value=0.0013 Score=46.63 Aligned_cols=27 Identities=30% Similarity=0.832 Sum_probs=15.7
Q ss_pred eeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceEE
Q 014903 161 MKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 200 (416)
Q Consensus 161 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 200 (416)
.+|+.|+|+|.+ ...+|+.|+|+|.++
T Consensus 10 ~~C~~C~GsG~~-------------~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 10 VACPKCERAGEI-------------EGTPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEE-------------TTEECTTTTTSSEEE
T ss_pred ccCCCCcceecc-------------CCCCCccCCCCccEE
Confidence 466666666632 134566666666554
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=91.99 E-value=0.083 Score=56.17 Aligned_cols=47 Identities=15% Similarity=0.193 Sum_probs=38.6
Q ss_pred CCcCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHH
Q 014903 10 NNTRYYEILGVSKNASA--EDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEV 60 (416)
Q Consensus 10 ~~~~~Y~iLgv~~~As~--~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYev 60 (416)
...+||.+||++.++.. .+|++|||+||+..+++ .++|..|..|+.|
T Consensus 627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----RHRYTLVDMANKV 675 (681)
T ss_dssp CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----HHHHHHHHHHHHH
T ss_pred cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----HHHHHHHHHhccc
Confidence 34569999999777766 77999999999976555 4889999999887
No 59
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=53.27 E-value=55 Score=30.33 Aligned_cols=35 Identities=20% Similarity=0.552 Sum_probs=19.1
Q ss_pred eeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceEE
Q 014903 161 MKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 200 (416)
Q Consensus 161 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 200 (416)
..|..|+... ...+....+ .....|+.|.++|..+
T Consensus 135 f~C~~C~~~~---~v~~~~~~~--~~P~~Cp~C~~~~f~l 169 (279)
T 1ltl_A 135 FECRGCMRHH---AVTQSTNMI--TEPSLCSECGGRSFRL 169 (279)
T ss_dssp EEETTTCCEE---EEECSSSSC--CCCSCCTTTCCCCEEE
T ss_pred EEcCCCCCEE---EEEecCCcc--cCCCcCCCCCCCCcEE
Confidence 4799997543 222222211 2245688888877443
No 60
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=50.17 E-value=39 Score=31.08 Aligned_cols=64 Identities=17% Similarity=0.186 Sum_probs=31.1
Q ss_pred eeeCCCCCCCceEEcCCCCCCCCCCCcEEEEeEEEEEEEcC-CCccCC---eEeecCCcCCCCCCCcccEEEEEE
Q 014903 187 QHPCNECKGTGETINDKDRCPQCKGDKVVQEKKVLEVIVEK-GMQNGQ---KITFPGEADEAPDTVTGDIVFVLQ 257 (416)
Q Consensus 187 ~~~C~~C~G~G~~~~~~~~C~~C~G~g~v~~~~~l~V~Ip~-G~~~G~---~i~~~g~G~~~~~~~~GDliv~i~ 257 (416)
...|+.|..+|...-....| .......++|.=.| .++.|+ .|.+.=.++-.-...|||-+.+.=
T Consensus 168 P~~Cp~C~~~~~~~l~~~~s-------~f~D~Q~ikiQE~pe~vp~G~~Prsi~v~l~~dLvd~~~PGDrV~vtG 235 (268)
T 2vl6_A 168 PTICPKCGKPGQFRLIPEKT-------KLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTG 235 (268)
T ss_dssp CSBCTTTCCBCEEEECGGGC-------EEEEEEEEEEECCGGGSCTTSCCCEEEEEEEGGGTTSSCTTCEEEEEE
T ss_pred CccCCCCCCCCCEEEecCcc-------EEEeeEEEEEEeCCCCCCCCCCCcEEEEEEccCccCcccCCCEEEEEE
Confidence 45688888877332211221 23344455553222 233343 233333444444557898877443
No 61
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=40.42 E-value=4.6 Score=42.71 Aligned_cols=47 Identities=15% Similarity=0.369 Sum_probs=30.8
Q ss_pred eeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceE-------------------EcCCCCCCCCCCCcE
Q 014903 161 MKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGET-------------------INDKDRCPQCKGDKV 214 (416)
Q Consensus 161 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~-------------------~~~~~~C~~C~G~g~ 214 (416)
.+|..|+|+|. -+|.......+|+.|+|+... ......|..|+....
T Consensus 192 ~~C~tCHGsGA-------~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~~C~~CH~~~~ 257 (669)
T 3pmq_A 192 DTCNSCHSNLA-------FHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSISNCQTCHADNP 257 (669)
T ss_dssp HHHHHHHSSCC-------TTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTTCCTTTSCCCT
T ss_pred CcCCCCCCCCC-------cCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccCcchhhcCCcc
Confidence 57999999994 233211235789999999311 112467999998653
No 62
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=38.42 E-value=7.2 Score=40.00 Aligned_cols=31 Identities=35% Similarity=0.664 Sum_probs=21.9
Q ss_pred cEEEEEE-ecCCcceeeeeeeCCCCCCCceEE
Q 014903 170 GMKVSIR-HLGPSMIQQMQHPCNECKGTGETI 200 (416)
Q Consensus 170 G~~~~~~-~~gpg~~~~~~~~C~~C~G~G~~~ 200 (416)
|.+.++| +.++.+...+..+||.|+|+|.+.
T Consensus 390 GLvEmTRkR~r~sL~e~~~~~Cp~C~G~G~v~ 421 (517)
T 2bx2_L 390 GLLEMSRQRLSPSLGESSHHVCPRCSGTGTVR 421 (517)
T ss_dssp SEEEEEECCCSCCHHHHHCCCCSSSSSSSCCC
T ss_pred ceEEEeecCcCcChhhhhcCcCCCcCCceeEC
Confidence 5554444 456767677778899999999764
No 63
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=34.91 E-value=22 Score=35.20 Aligned_cols=65 Identities=20% Similarity=0.317 Sum_probs=0.0
Q ss_pred CCCCccccEEEEEEecCCcc--eeeeeeeCCCCCCC-------------ceEEcCCCCCCCCCCCcEEEEeE--------
Q 014903 163 CSGCQGTGMKVSIRHLGPSM--IQQMQHPCNECKGT-------------GETINDKDRCPQCKGDKVVQEKK-------- 219 (416)
Q Consensus 163 C~~C~G~G~~~~~~~~gpg~--~~~~~~~C~~C~G~-------------G~~~~~~~~C~~C~G~g~v~~~~-------- 219 (416)
|+.|+..|......-.=|.| +-.+...|+.|+-+ |..+. ...+..
T Consensus 15 Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyrn~ev~~~g~~~pkG~r~t------------L~V~~~~DLnr~Vv 82 (404)
T 2qkd_A 15 CMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYT------------LTVRSQEDMNREVV 82 (404)
T ss_dssp CTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCEEEEEEEEESSCSSEEEEE------------EEECSHHHHTCEEE
T ss_pred CCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCchheeeECcccCCCcEEEE------------EEECChhcccceEE
Q ss_pred ----------EEEEEEcCCCccCCeEeecC
Q 014903 220 ----------VLEVIVEKGMQNGQKITFPG 239 (416)
Q Consensus 220 ----------~l~V~Ip~G~~~G~~i~~~g 239 (416)
.|.+.||||...|..-++.|
T Consensus 83 KS~tati~IPEL~~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 83 KTDSATTRIPELDFEIPAFSQKGALTTVEG 112 (404)
T ss_dssp ECTTCEEEEGGGTEEECTTSSCCEEEEHHH
T ss_pred EcCCcEEEeeeeeEEecCccCCceEEeHHH
No 64
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=33.61 E-value=38 Score=31.49 Aligned_cols=19 Identities=37% Similarity=0.352 Sum_probs=10.6
Q ss_pred CcCCCCCCCcccEEEEEEE
Q 014903 240 EADEAPDTVTGDIVFVLQQ 258 (416)
Q Consensus 240 ~G~~~~~~~~GDliv~i~~ 258 (416)
.++-.....|||-+.+.=+
T Consensus 205 ~~dLvd~~~PGDrV~vtGI 223 (279)
T 1ltl_A 205 EDDLVDTLTPGDIVRVTGT 223 (279)
T ss_dssp EGGGTTCCCTTCEEEEEEE
T ss_pred cccccCccCCCCEEEEEEE
Confidence 3443344567887765443
No 65
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=29.51 E-value=6.7 Score=40.37 Aligned_cols=66 Identities=21% Similarity=0.465 Sum_probs=36.5
Q ss_pred eccccccCCcccC-----ceeeCCCCccccEEEEE--EecCCcceeeeeeeCCCCCCCceEEcCCCCCCCCCCCc
Q 014903 146 ICSKCSGKGSKSG-----ASMKCSGCQGTGMKVSI--RHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGDK 213 (416)
Q Consensus 146 ~C~~C~G~G~~~~-----~~~~C~~C~G~G~~~~~--~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g 213 (416)
.|..||+.+.... ....|..|++.-..+.. ....|-....-...|..|+-.-.. ....|..||...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~--~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEE--PKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSC--CCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcC--cCchhhhhcCCC
Confidence 6999999875421 12469999975211100 000110001114689999965432 347899998654
No 66
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=29.38 E-value=43 Score=24.54 Aligned_cols=52 Identities=21% Similarity=0.358 Sum_probs=30.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCChHHH-HHHH--HHHHHcCC-cccccccccc
Q 014903 22 KNASAEDLKKAYKKAAIKNHPDKGGDPEKF-KELA--QAYEVLSD-PEKREIYDQY 73 (416)
Q Consensus 22 ~~As~~eIk~Ayrkla~k~HPDk~~~~~~F-~~i~--~AYevLsd-~~kR~~YD~~ 73 (416)
.-+|.+|.+.||+.|-..++-+-.-.=+++ +.|. .-|.+|.+ .++++.|+.|
T Consensus 10 ~~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 10 TWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCCSHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCccccccCCHHHHHHHHHHH
Confidence 357899999999999988753332221222 2222 34556655 3455566555
No 67
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=28.62 E-value=72 Score=26.72 Aligned_cols=39 Identities=13% Similarity=0.180 Sum_probs=29.9
Q ss_pred HhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCCCCc
Q 014903 282 ALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGM 321 (416)
Q Consensus 282 Al~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g~Gm 321 (416)
.|-|+++. ...||+.+..+.|++-+++||..+.|-..|-
T Consensus 51 ~LgGW~L~-r~v~g~~~~y~FP~~~~L~pg~~VtVwa~g~ 89 (144)
T 3jt0_A 51 PMGGWEMI-RKIGDTSVSYKYTSRYVLKAGQTVTIWAANA 89 (144)
T ss_dssp ECTTCEEE-EEETTEEEEEECCTTCEECTTCEEEEEETTS
T ss_pred ecCCcEEE-EEeCCCceEEEcCCCcEECCCCEEEEEECCC
Confidence 45566655 3457777778999999999999999976664
No 68
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=27.63 E-value=36 Score=24.10 Aligned_cols=47 Identities=23% Similarity=0.415 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-hHHHHHH---HHHHHHcCC-c-ccccccccc
Q 014903 27 EDLKKAYKKAAIKNHPDKGGD-PEKFKEL---AQAYEVLSD-P-EKREIYDQY 73 (416)
Q Consensus 27 ~eIk~Ayrkla~k~HPDk~~~-~~~F~~i---~~AYevLsd-~-~kR~~YD~~ 73 (416)
+|..+||.+|-+...=|-+-+ +...+.| .--|-+|.| | ++++.|+.|
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y 55 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKY 55 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHH
Confidence 577899999988775443322 3556666 367999997 5 467778776
No 69
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=27.44 E-value=7.1 Score=40.20 Aligned_cols=65 Identities=20% Similarity=0.472 Sum_probs=35.5
Q ss_pred eccccccCCcccC------ceeeCCCCccccEEEEE----EecCCcceee-eeeeCCCCCCCceEEcCCCCCCCCCCC
Q 014903 146 ICSKCSGKGSKSG------ASMKCSGCQGTGMKVSI----RHLGPSMIQQ-MQHPCNECKGTGETINDKDRCPQCKGD 212 (416)
Q Consensus 146 ~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~----~~~gpg~~~~-~~~~C~~C~G~G~~~~~~~~C~~C~G~ 212 (416)
.|..||+...... ....|..|+........ ...-|..... -...|..|+..=.. ....|..||..
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~--~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEK--SMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSC--BCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccC--CCccccccChh
Confidence 6999999874322 12469999975311000 0000101111 14579999966332 24789999864
No 70
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=25.97 E-value=59 Score=25.52 Aligned_cols=40 Identities=18% Similarity=0.463 Sum_probs=25.9
Q ss_pred cccccccccccC---HHHHhcCcEEEEeccCCcEEEEEeCCCc
Q 014903 267 KGEDLFYEHTLS---LTEALCGFQFALTHLDGRQLLIKSNPGE 306 (416)
Q Consensus 267 ~G~DL~~~~~I~---l~eAl~G~~~~i~tldG~~l~i~~~~g~ 306 (416)
+|.+|++....+ ..+.....++.|++++|+.+.|.+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~m~I~Vk~~~G~~~~l~v~~~~ 56 (111)
T 3vdz_A 14 DGDELYIDTDNDGSIDGDELLAMQIFVKTLTGKTITLEVEPSD 56 (111)
T ss_dssp CGGGEEECTTCSSCCCTGGGGCEEEEEECSSSCEEEEEECTTC
T ss_pred CCceeccccccccccCcCCCccEEEEEEeCCCCEEEEEeCCCC
Confidence 456666665554 3444455677788888877777776653
No 71
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=25.69 E-value=49 Score=31.96 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=27.1
Q ss_pred CcCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHH
Q 014903 11 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELA 55 (416)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIk~Ayrkla~k~HPDk~~~~~~F~~i~ 55 (416)
...|+++|.. +.+.++|+..++.+...| +++++ +++.|.
T Consensus 218 ~~~W~~~~~~--~vt~~~l~~i~~~il~~y--~~~~~--~L~~i~ 256 (358)
T 2pk2_A 218 GKHWWEYVDA--TVTLELLDELTHEFLQIL--EKTPN--RLKRIW 256 (358)
T ss_dssp SCCTTTTSCS--SCCHHHHHHHHHHHHHHT--TTCTT--HHHHHH
T ss_pred ccchHHHHhc--cCCHHHHHHHHHHHHHHH--HhCcc--cccchh
Confidence 3568888743 568999999999998887 34433 444444
No 72
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=24.61 E-value=30 Score=37.62 Aligned_cols=33 Identities=30% Similarity=0.626 Sum_probs=20.8
Q ss_pred eCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCce
Q 014903 162 KCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGE 198 (416)
Q Consensus 162 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 198 (416)
.|..|.|.|.+....++- ..+..+|+.|+|+..
T Consensus 640 ~c~~c~g~G~~~~~~~f~----~~v~~~c~~c~G~r~ 672 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFL----PSVYAPCPVCHGTRY 672 (842)
T ss_dssp BCTTTTTCSEEEETTCSS----SCEEEECTTTTTCCB
T ss_pred ccccccCCCccchhhhcC----CccceecccccCccc
Confidence 388999999764333322 234567888877653
No 73
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=23.04 E-value=58 Score=25.49 Aligned_cols=42 Identities=17% Similarity=0.531 Sum_probs=24.6
Q ss_pred eeeccccccCCcccCceeeCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCceE
Q 014903 144 NVICSKCSGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGET 199 (416)
Q Consensus 144 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~ 199 (416)
...||.|+-.=...+....|..|+.. .+...-||+|+-.=.+
T Consensus 32 ~~~CP~Cq~eL~~~g~~~hC~~C~~~--------------f~~~a~CPdC~q~Lev 73 (101)
T 2jne_A 32 ELHCPQCQHVLDQDNGHARCRSCGEF--------------IEMKALCPDCHQPLQV 73 (101)
T ss_dssp CCBCSSSCSBEEEETTEEEETTTCCE--------------EEEEEECTTTCSBCEE
T ss_pred cccCccCCCcceecCCEEECccccch--------------hhccccCcchhhHHHH
Confidence 36788887542222334468888753 2345678888755333
No 74
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=22.95 E-value=24 Score=28.74 Aligned_cols=41 Identities=27% Similarity=0.431 Sum_probs=24.8
Q ss_pred cccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHcCCccccccccc
Q 014903 14 YYEILGVSKNAS--AEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQ 72 (416)
Q Consensus 14 ~Y~iLgv~~~As--~~eIk~Ayrkla~k~HPDk~~~~~~F~~i~~AYevLsd~~kR~~YD~ 72 (416)
-++.||+++.++ ...+|++|.+. -.+||.+++.++++..|.
T Consensus 69 Va~~lg~p~~~~sa~~~Lr~~Y~k~------------------L~~YE~~~~~e~~~l~~~ 111 (121)
T 2rq5_A 69 LADMLRIPKTAQDRLAKLQEAYCQY------------------LLSYDSLSPEEHRRLEKE 111 (121)
T ss_dssp HHHHTCCCTTCSSHHHHHHHHHHTT------------------HHHHHHCCHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcHHHHHHHHHHHH------------------hHHHHCcCHHHHhhHHHH
Confidence 345566665543 33566666554 557777877777776654
No 75
>1gmu_A UREE; metallochaperone; 1.5A {Klebsiella aerogenes} SCOP: b.107.1.1 d.58.38.1 PDB: 1gmw_A 1gmw_D 1gmv_A
Probab=21.78 E-value=1.4e+02 Score=24.68 Aligned_cols=45 Identities=18% Similarity=0.126 Sum_probs=35.9
Q ss_pred cccccCHHHHhcCcEEEEeccCCcEEEEEeCCCccccCCcEEEeCC
Q 014903 273 YEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINE 318 (416)
Q Consensus 273 ~~~~I~l~eAl~G~~~~i~tldG~~l~i~~~~g~vi~~g~~~~i~g 318 (416)
-++.++..+. .=....+.|-+|+.+-|.+|.+..++.|+++....
T Consensus 16 ~~v~L~~~~r-~k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~dd 60 (143)
T 1gmu_A 16 ASVTLPIDVR-VKSRVKVTLNDGRDAGLLLPRGLLLRGGDVLSNEE 60 (143)
T ss_dssp EEEEECHHHH-TCSEEEEECTTSCEEEEECCSSCCCCTTCEEECTT
T ss_pred eEEEeCHHHH-hcceEEEECCCCCEEEEECCCCcccCCCCEEEECC
Confidence 3456777666 34477888999999999999999999999997654
No 76
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=21.27 E-value=71 Score=23.72 Aligned_cols=25 Identities=24% Similarity=0.573 Sum_probs=16.3
Q ss_pred HhcCcEEEEeccCCcEEEEEeCCCc
Q 014903 282 ALCGFQFALTHLDGRQLLIKSNPGE 306 (416)
Q Consensus 282 Al~G~~~~i~tldG~~l~i~~~~g~ 306 (416)
-|-|..+.|.+++|+.+.|.+++..
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~~ 30 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPSD 30 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTTS
T ss_pred cccceEEEEEeCCCCEEEEEECCCC
Confidence 3567888888888888777777653
No 77
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=21.02 E-value=97 Score=24.11 Aligned_cols=21 Identities=24% Similarity=0.543 Sum_probs=17.4
Q ss_pred EEEEEEECCCCCCHHHHHHHH
Q 014903 334 YIHFTVEFPDSLTPDQVKALE 354 (416)
Q Consensus 334 ~v~~~V~fP~~l~~~~~~~L~ 354 (416)
.|++.|++|..+++++...|+
T Consensus 4 lV~m~V~~P~~~~~~~~~~~~ 24 (96)
T 1mli_A 4 HVKMTVKLPVDMDPAKATQLK 24 (96)
T ss_pred EEEEEeeCCCCCCHHHHHHHH
Confidence 589999999999988865554
No 78
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=20.26 E-value=49 Score=36.51 Aligned_cols=32 Identities=28% Similarity=0.818 Sum_probs=21.0
Q ss_pred eCCCCccccEEEEEEecCCcceeeeeeeCCCCCCCc
Q 014903 162 KCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTG 197 (416)
Q Consensus 162 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 197 (416)
.|..|.|.|++....++ ...+..+|+.|.|..
T Consensus 755 rC~~C~g~G~i~~em~f----l~~v~~~ce~c~G~r 786 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHF----LPDVYVPCEVCHGKR 786 (972)
T ss_dssp BCTTTTTCSEEEECCSS----SCCEEEECTTTTTCC
T ss_pred cccccccccceeeehhc----ccccccccccccccc
Confidence 49999999976443222 233456788888764
Done!