BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014904
(416 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 187/294 (63%), Gaps = 9/294 (3%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQG-EREFQAEVE 92
F+ EL A+D FS+ N+LG+GGFG V++G L +G VA+K+LK QG E +FQ EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 93 IISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK--GRPTMDWLTRLKIALG 150
+IS H++L+ L G+ ++R+LVY ++ N ++ L + +P +DW R +IALG
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
SA+GLAYLH+ C PKIIHRD+KAANILLD +FEA V DFGLAK+ + HV V GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDS--LVDWARPLLNRA 268
G++APEY S+GK +EK+DVF +GVMLLELITG+R D +D L+DW + LL
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL--- 264
Query: 269 IEDGNFDTLVDPKLHNEYNHNEXXXXXXXXXXXXXHSARRRPRMSQIVRALEGD 322
++ + LVD L Y E S RP+MS++VR LEGD
Sbjct: 265 -KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 185/294 (62%), Gaps = 9/294 (3%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQG-EREFQAEVE 92
F+ EL A+D F + N+LG+GGFG V++G L +G VA+K+LK QG E +FQ EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 93 IISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK--GRPTMDWLTRLKIALG 150
+IS H++L+ L G+ ++R+LVY ++ N ++ L + +P +DW R +IALG
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
SA+GLAYLH+ C PKIIHRD+KAANILLD +FEA V DFGLAK+ + HV V G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDS--LVDWARPLLNRA 268
G++APEY S+GK +EK+DVF +GVMLLELITG+R D +D L+DW + LL
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL--- 256
Query: 269 IEDGNFDTLVDPKLHNEYNHNEXXXXXXXXXXXXXHSARRRPRMSQIVRALEGD 322
++ + LVD L Y E S RP+MS++VR LEGD
Sbjct: 257 -KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 165/286 (57%), Gaps = 10/286 (3%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
+L AT+ F L+G G FG V++GVL +G +VA+K+ S QG EF+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPT--MDWLTRLKIALGSAKGL 155
H HLVSL+G+ ++ +L+Y+++ N L+ HL+G PT M W RL+I +G+A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLA 214
YLH IIHRD+K+ NILLD F K+ DFG++K ++++ TH+ V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
PEY G+LTEKSDV+SFGV+L E++ R + + +L +WA N +G
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN----NGQL 265
Query: 275 DTLVDPKLHNEYNHNEXXXXXXXXXXXXXHSARRRPRMSQIVRALE 320
+ +VDP L ++ S+ RP M ++ LE
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 164/286 (57%), Gaps = 10/286 (3%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
+L AT+ F L+G G FG V++GVL +G +VA+K+ S QG EF+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPT--MDWLTRLKIALGSAKGL 155
H HLVSL+G+ ++ +L+Y+++ N L+ HL+G PT M W RL+I +G+A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV-NTHVSTRVMGTFGYLA 214
YLH IIHRD+K+ NILLD F K+ DFG++K +++ TH+ V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
PEY G+LTEKSDV+SFGV+L E++ R + + +L +WA N +G
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN----NGQL 265
Query: 275 DTLVDPKLHNEYNHNEXXXXXXXXXXXXXHSARRRPRMSQIVRALE 320
+ +VDP L ++ S+ RP M ++ LE
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 146/227 (64%), Gaps = 17/227 (7%)
Query: 33 TFTYEELARATDGFSD------ANLLGQGGFGYVHRGVLPNGKEVAIKQLKA----GSGQ 82
+F++ EL T+ F + N +G+GGFG V++G + N VA+K+L A + +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 83 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDW 141
+++F E++++++ H++LV L+G+ + G LVY ++PN +L L G P + W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD-VNT 200
R KIA G+A G+ +LHE+ H IHRDIK+ANILLD F AK++DFGLA+ + T
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
+ +R++GT Y+APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 145/227 (63%), Gaps = 17/227 (7%)
Query: 33 TFTYEELARATDGFSD------ANLLGQGGFGYVHRGVLPNGKEVAIKQLKA----GSGQ 82
+F++ EL T+ F + N +G+GGFG V++G + N VA+K+L A + +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 83 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDW 141
+++F E++++++ H++LV L+G+ + G LVY ++PN +L L G P + W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD-VNT 200
R KIA G+A G+ +LHE+ H IHRDIK+ANILLD F AK++DFGLA+ + T
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
+ R++GT Y+APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 144/227 (63%), Gaps = 17/227 (7%)
Query: 33 TFTYEELARATDGFSD------ANLLGQGGFGYVHRGVLPNGKEVAIKQLKA----GSGQ 82
+F++ EL T+ F + N +G+GGFG V++G + N VA+K+L A + +
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 66
Query: 83 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDW 141
+++F E++++++ H++LV L+G+ + G LVY ++PN +L L G P + W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
R KIA G+A G+ +LHE+ H IHRDIK+ANILLD F AK++DFGLA+ +
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 202 V-STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
V R++GT Y+APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 141/227 (62%), Gaps = 17/227 (7%)
Query: 33 TFTYEELARATDGFSD------ANLLGQGGFGYVHRGVLPNGKEVAIKQLKA----GSGQ 82
+F++ EL T+ F + N G+GGFG V++G + N VA+K+L A + +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 83 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDW 141
+++F E+++ ++ H++LV L+G+ + G LVY + PN +L L G P + W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
R KIA G+A G+ +LHE+ H IHRDIK+ANILLD F AK++DFGLA+ +
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 202 V-STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
V +R++GT Y APE A G++T KSD++SFGV+LLE+ITG VD
Sbjct: 181 VXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 114/206 (55%), Gaps = 9/206 (4%)
Query: 46 FSDANL---LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGER--EFQAEVEIISRVHHK 100
+ D N+ +G G FG VHR +G +VA+K L ER EF EV I+ R+ H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKG-RPTMDWLTRLKIALGSAKGLAYLH 159
++V +G T +V E++ +L LH G R +D RL +A AKG+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
+P I+HRD+K+ N+L+D K+ KV DFGL+++ + S GT ++APE
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX-SKXAAGTPEWMAPEVLR 212
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
EKSDV+SFGV+L EL T ++P
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 46 FSDANL---LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGER--EFQAEVEIISRVHHK 100
+ D N+ +G G FG VHR +G +VA+K L ER EF EV I+ R+ H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKG-RPTMDWLTRLKIALGSAKGLAYLH 159
++V +G T +V E++ +L LH G R +D RL +A AKG+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-VMGTFGYLAPEYA 218
+P I+HR++K+ N+L+D K+ KV DFGL+++ + +T +S++ GT ++APE
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVL 211
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
EKSDV+SFGV+L EL T ++P
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Query: 52 LGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGE-------REFQAEVEIISRVHHKHLV 103
+G+GGFG VH+G L K V AIK L G +GE +EFQ EV I+S ++H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G RM V EFVP L L K P + W +L++ L A G+ Y+ ++ +
Sbjct: 87 KLYGL-MHNPPRM-VMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQN 142
Query: 164 PKIIHRDIKAANILLDFKFE-----AKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY- 217
P I+HRD+++ NI L E AKVADFGL S + H + ++G F ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL----SQQSVHSVSGLLGNFQWMAPETI 198
Query: 218 -ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
A TEK+D +SF ++L ++TG P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 23/211 (10%)
Query: 52 LGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGE-------REFQAEVEIISRVHHKHLV 103
+G+GGFG VH+G L K V AIK L G +GE +EFQ EV I+S ++H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G RM V EFVP L L K P + W +L++ L A G+ Y+ ++ +
Sbjct: 87 KLYGL-MHNPPRM-VMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQN 142
Query: 164 PKIIHRDIKAANILLDFKFE-----AKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY- 217
P I+HRD+++ NI L E AKVADFG S + H + ++G F ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVHSVSGLLGNFQWMAPETI 198
Query: 218 -ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
A TEK+D +SF ++L ++TG P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 23/211 (10%)
Query: 52 LGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGE-------REFQAEVEIISRVHHKHLV 103
+G+GGFG VH+G L K V AIK L G +GE +EFQ EV I+S ++H ++V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G RM V EFVP L L K P + W +L++ L A G+ Y+ ++ +
Sbjct: 87 KLYGL-MHNPPRM-VMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQN 142
Query: 164 PKIIHRDIKAANILLDFKFE-----AKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY- 217
P I+HRD+++ NI L E AKVADF L S + H + ++G F ++APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL----SQQSVHSVSGLLGNFQWMAPETI 198
Query: 218 -ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
A TEK+D +SF ++L ++TG P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG VH G N +VAIK +K GS E +F E E++ ++ H LV L G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
+ LV+EF+ + L +L + R T L + L +G+AYL E C +IHRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L+ KV+DFG+ + D ST + +PE S + + KSDV+S
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 232 FGVMLLELIT-GRRPVD--STHTFVED 255
FGV++ E+ + G+ P + S VED
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNSEVVED 236
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG VH G N +VAIK ++ G+ E +F E E++ ++ H LV L G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
+ LV+EF+ + L +L + R T L + L +G+AYL E C +IHRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L+ KV+DFG+ + D ST + +PE S + + KSDV+S
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 232 FGVMLLELIT-GRRPVD--STHTFVED 255
FGV++ E+ + G+ P + S VED
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEVVED 219
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG VH G N +VAIK ++ G+ E +F E E++ ++ H LV L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
+ LV+EF+ + L +L + R T L + L +G+AYL E C +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L+ KV+DFG+ + D ST + +PE S + + KSDV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 232 FGVMLLELIT-GRRPVD--STHTFVED 255
FGV++ E+ + G+ P + S VED
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG VH G N +VAIK ++ G+ E +F E E++ ++ H LV L G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
+ LV+EF+ + L +L + R T L + L +G+AYL E C +IHRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L+ KV+DFG+ + D ST + +PE S + + KSDV+S
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 232 FGVMLLELIT-GRRPVD--STHTFVED 255
FGV++ E+ + G+ P + S VED
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVED 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG VH G N +VAIK ++ G+ E +F E E++ ++ H LV L G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
+ LV EF+ + L +L + R T L + L +G+AYL E C +IHRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L+ KV+DFG+ + D ST + +PE S + + KSDV+S
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 232 FGVMLLELIT-GRRPVD--STHTFVED 255
FGV++ E+ + G+ P + S VED
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEVVED 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
++G+G FG V + K+VAIKQ+++ S + + F E+ +SRV+H ++V L G
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG--A 70
Query: 111 AGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
+ LV E+ +L LHG + P + L ++G+AYLH +IHR
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 170 DIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSD 228
D+K N+LL K+ DFG A D+ TH+ T G+ ++APE +EK D
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFG---TACDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 229 VFSFGVMLLELITGRRPVD 247
VFS+G++L E+IT R+P D
Sbjct: 187 VFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
++G+G FG V + K+VAIKQ+++ S + + F E+ +SRV+H ++V L G
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG--A 69
Query: 111 AGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
+ LV E+ +L LHG + P + L ++G+AYLH +IHR
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 170 DIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSD 228
D+K N+LL K+ DFG A D+ TH+ T G+ ++APE +EK D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFG---TACDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 229 VFSFGVMLLELITGRRPVD 247
VFS+G++L E+IT R+P D
Sbjct: 186 VFSWGIILWEVITRRKPFD 204
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 106/207 (51%), Gaps = 8/207 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG VH G N +VAIK ++ G+ E +F E E++ ++ H LV L G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
+ LV+EF+ + L +L + R T L + L +G+AYL E +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L+ KV+DFG+ + D ST + +PE S + + KSDV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 232 FGVMLLELIT-GRRPVD--STHTFVED 255
FGV++ E+ + G+ P + S VED
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVED 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 71
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 128
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 189 WSFGILLTELTTKGRVP 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ +HR
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 365 WSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ +HR
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 365 WSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 330
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 387
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 448 WSFGILLTELTTKGRVP 464
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 74
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 131
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 192 WSFGILLTELTTKGRVP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ +HR
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 365 WSFGILLTELTTKGRVP 381
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 72
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 129
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 190 WSFGILLTELTTKGRVP 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK LK G+ E F E +I+ ++ H LV L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ + L+F G+GR + + +A A G+AY+ + IHRD+
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNY---IHRDL 131
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
++ANIL+ K+ADFGLA++ D + APE A G+ T KSDV+S
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 232 FGVMLLELIT-GRRP 245
FG++L EL+T GR P
Sbjct: 192 FGILLTELVTKGRVP 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 70
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 127
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 188 WSFGILLTELTTKGRVP 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 86 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 141
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 202 FGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 88 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 143
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 204 FGILLTEIVTHGRIP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 82 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 137
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 198 FGILLTEIVTHGRIP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 78
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + ++ A G+AY+ + +HR
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHR 135
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 196 WSFGILLTELTTKGRVP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 196 FGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 81 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 136
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 197 FGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 196 FGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 89 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 144
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 205 FGILLTEIVTHGRIP 219
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 78
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + ++ A G+AY+ + +HR
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHR 135
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 196 WSFGILLTELTTKGRVP 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ + +HR
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHR 138
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D+ AANIL+ KVADFGLA++ D + APE A G+ T KSDV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 199 WSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LGQG FG V G VAIK LK G+ E F E +++ ++ H+ LV L Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQL---YAV 248
Query: 112 GSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
S+ +V E++ +L L G+ + + +A A G+AY+ +HR
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AANIL+ KVADFGL ++ D + APE A G+ T KSDV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L EL T GR P
Sbjct: 366 WSFGILLTELTTKGRVP 382
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 90 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 145
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 206 FGILLTEIVTHGRIP 220
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 85 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 140
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 200
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 201 FGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 86 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 141
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 202 FGILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 196 FGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 75 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 130
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 191 FGILLTEIVTHGRIP 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 29/212 (13%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGS----GQGEREFQAEVEIISRVHHKHLVSLV 106
++G GGFG V+R G EVA+K + Q + E ++ + + H ++++L
Sbjct: 14 IIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPT---MDWLTRLKIALGSAKGLAYLHEDCH 163
G LV EF L L GK P ++W A+ A+G+ YLH++
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAI 126
Query: 164 PKIIHRDIKAANILLDFKFE--------AKVADFGLAKIASDVNTHVSTRV--MGTFGYL 213
IIHRD+K++NIL+ K E K+ DFGLA+ H +T++ G + ++
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWM 181
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
APE + ++ SDV+S+GV+L EL+TG P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 120/229 (52%), Gaps = 23/229 (10%)
Query: 35 TYEELARATDGFS---DAN------LLGQGGFGYVHRG--VLPNGKEVA--IKQLKAGSG 81
TYE+ RA F+ DA+ ++G G FG V G LP ++VA IK LK G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 82 QGER-EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTM 139
+ +R +F E I+ + H ++V L G T G M+V EF+ N L+ L G+ T+
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+ + + G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D
Sbjct: 145 --IQLVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 200 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
V T G + APE K T SDV+S+G+++ E+++ G RP
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY TA
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 130
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + IA +A+G+ YLH IIHRD+
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDL 134
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE S + +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 195 DVYAFGIVLYELMTGQLP 212
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G G V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHRD+
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDL 135
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 196 FGILLTEIVTHGRIP 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 115/224 (51%), Gaps = 14/224 (6%)
Query: 32 STFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER 85
ST T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 19 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR 144
+F E I+ + H +++ L G T M+V E++ N +L+ L K +
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 137
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST 204
+ + G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 138 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 205 RVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 115/224 (51%), Gaps = 14/224 (6%)
Query: 32 STFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER 85
ST T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR 144
+F E I+ + H +++ L G T M+V E++ N +L+ L K +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 120
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST 204
+ + G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 121 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 205 RVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 23/230 (10%)
Query: 34 FTYEELARATDGFS---DAN------LLGQGGFGYVHRGVL--PNGKE--VAIKQLKAG- 79
FT+E+ +A F+ DA+ ++G G FG V G L P +E VAIK LKAG
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 80 SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT 138
+ + R+F +E I+ + H +++ L G T M++ E++ N +L+ F GR T
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 139 MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV 198
+ L + +GS G+ YL + +HRD+ A NIL++ KV+DFG++++ D
Sbjct: 130 VIQLVGMLRGIGS--GMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 199 NTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
T G + APE + K T SDV+S+G+++ E+++ G RP
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGLA++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K LK GS + F AE ++ ++ H+ LV L T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N +L L + L +A A+G+A++ E + IHR++
Sbjct: 76 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRNL 131
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 191
Query: 232 FGVMLLELIT-GRRP 245
FG++L E++T GR P
Sbjct: 192 FGILLTEIVTHGRIP 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY TA
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + IA +A+G+ YLH IIHRD+
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDL 146
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPE---YASSGKLTEKS 227
K+ NI L K+ DFGLA S + +H ++ G+ ++APE S + +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 207 DVYAFGIVLYELMTGQLP 224
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 158
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 135
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 103 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 157
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 218 DVYAFGIVLYELMTGQLP 235
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 135
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 78 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 132
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 193 DVYAFGIVLYELMTGQLP 210
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 130
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA + S + +H ++ G+ ++APE + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 14/204 (6%)
Query: 51 LLGQGGFGYVHRGVL--PNGKE--VAIKQLKAG-SGQGEREFQAEVEIISRVHHKHLVSL 105
++G G FG V G L P +E VAIK LKAG + + R+F +E I+ + H +++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 106 VGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G T M++ E++ N +L+ F GR T+ L + +GS G+ YL + +
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS--GMKYLSDMSY- 137
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG--YLAPEYASSGK 222
+HRD+ A NIL++ KV+DFG++++ D T G + APE + K
Sbjct: 138 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 223 LTEKSDVFSFGVMLLELIT-GRRP 245
T SDV+S+G+++ E+++ G RP
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 30 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 89
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 148
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 149 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 14/224 (6%)
Query: 32 STFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER 85
ST T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR 144
+F E I+ + H +++ L G T M+V E + N +L+ L K +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQL 120
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST 204
+ + G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 121 VGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 205 RVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 13/204 (6%)
Query: 51 LLGQGGFGYVHRGVL--PNGKE---VAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVS 104
++G G FG V++G+L +GK+ VAIK LKAG + +R +F E I+ + H +++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L G + M++ E++ N L+ L K L + + G A G+ YL +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG--YLAPEYASSGK 222
+HRD+ A NIL++ KV+DFGL+++ D T G + APE S K
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 223 LTEKSDVFSFGVMLLELIT-GRRP 245
T SDV+SFG+++ E++T G RP
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 14/204 (6%)
Query: 51 LLGQGGFGYVHRGVL--PNGKE--VAIKQLKAG-SGQGEREFQAEVEIISRVHHKHLVSL 105
++G G FG V G L P +E VAIK LKAG + + R+F +E I+ + H +++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 106 VGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G T M++ E++ N +L+ F GR T+ L + +GS G+ YL + +
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS--GMKYLSDMSY- 131
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG--YLAPEYASSGK 222
+HRD+ A NIL++ KV+DFG++++ D T G + APE + K
Sbjct: 132 --VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 223 LTEKSDVFSFGVMLLELIT-GRRP 245
T SDV+S+G+++ E+++ G RP
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E++ N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL ++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + IA +A+G+ YLH IIHRD+
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDL 146
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPE---YASSGKLTEKS 227
K+ NI L K+ DFGLA S + +H ++ G+ ++APE S + +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 207 DVYAFGIVLYELMTGQLP 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 34 FTYEELARATDGFSDA---------NLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGS 80
FT+E+ A F+ ++G G FG V G LP +E VAIK LK+G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 81 GQGER-EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT 138
+ +R +F +E I+ + H +++ L G T + M++ EF+ N +L+ F G+ T
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 139 MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASD 197
+ + + + G A G+ YL + + +HRD+ A NIL++ KV+DFGL++ + D
Sbjct: 134 V--IQLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 198 VNTHVSTRVMG---TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
+ T +G + APE K T SDV+S+G+++ E+++ G RP
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G VA+KQL+ +R+FQ E++I+ +H +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y G Q + LV E++P+ L L + R +D L + KG+ YL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 133
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ +HRD+ A NIL++ + K+ADFGLAK+ + R G F Y APE S
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDN 192
Query: 222 KLTEKSDVFSFGVMLLELIT 241
+ +SDV+SFGV+L EL T
Sbjct: 193 IFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G VA+KQL+ +R+FQ E++I+ +H +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y G Q + LV E++P+ L L + R +D L + KG+ YL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 146
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ +HRD+ A NIL++ + K+ADFGLAK+ + R G F Y APE S
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDN 205
Query: 222 KLTEKSDVFSFGVMLLELIT 241
+ +SDV+SFGV+L EL T
Sbjct: 206 IFSRQSDVWSFGVVLYELFT 225
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E + N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G VA+KQL+ +R+FQ E++I+ +H +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y G Q + LV E++P+ L L + R +D L + KG+ YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 134
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ +HRD+ A NIL++ + K+ADFGLAK+ + R G F Y APE S
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDN 193
Query: 222 KLTEKSDVFSFGVMLLELIT 241
+ +SDV+SFGV+L EL T
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 51 LLGQGGFGYVHRGVL--PNGKE--VAIKQLKAG-SGQGEREFQAEVEIISRVHHKHLVSL 105
++G G FG V RG L P KE VAIK LK G + + REF +E I+ + H +++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G T M++ EF+ N L+ L G+ T+ + + + G A G+ YL E +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMSY- 139
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMG---TFGYLAPEYASS 220
+HRD+ A NIL++ KV+DFGL++ + + + T +G + APE +
Sbjct: 140 --VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K T SD +S+G+++ E+++ G RP
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 16/206 (7%)
Query: 51 LLGQGGFGYVHRGVL--PNGKE--VAIKQLKAG-SGQGEREFQAEVEIISRVHHKHLVSL 105
++G G FG V RG L P KE VAIK LK G + + REF +E I+ + H +++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G T M++ EF+ N L+ L G+ T+ + + + G A G+ YL E +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMSY- 137
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS-TRVMG---TFGYLAPEYASS 220
+HRD+ A NIL++ KV+DFGL++ + ++ + T +G + APE +
Sbjct: 138 --VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K T SD +S+G+++ E+++ G RP
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G N +VA+K LK G+ + F E ++ + H LV L T
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 112 GSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRL-KIALGSAKGLAYLHEDCHPKIIHR 169
++ E++ +L +F +G + L +L + A+G+AY+ + IHR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVL--LPKLIDFSAQIAEGMAYIERKNY---IHR 134
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AAN+L+ K+ADFGLA++ D + APE + G T KSDV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L E++T G+ P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 158
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA S + +H ++ G+ ++APE + +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ EF+P +L +L K + +D + L+ KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 25/230 (10%)
Query: 35 TYEELARATDGFSDA---------NLLGQGGFGYVHRGVL--PNGKEV--AIKQLKAG-S 80
TYEE RA F+ ++G G G V G L P ++V AIK LKAG +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 81 GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--HGKGRPT 138
+ R+F +E I+ + H +++ L G T G M+V E++ N +L+ L H
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 139 MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV 198
M + L+ G G+ YL + + +HRD+ A N+L+D KV+DFGL+++ D
Sbjct: 151 MQLVGMLR---GVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 199 NTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
T G + APE + + SDV+SFGV++ E++ G RP
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 96 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 150
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA S + +H ++ G+ ++APE + +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 211 DVYAFGIVLYELMTGQLP 228
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 33 TFTYEELARATDG--FSDANLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER- 85
T T E A+ D S ++G G FG V G LP+ KE VAIK LK G + +R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL 145
+F E I+ + H +++ L G T M+V E + N +L+ L K + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLV 150
Query: 146 KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR 205
+ G A G+ YL + +HRD+ A NIL++ KV+DFGL+++ D T
Sbjct: 151 GMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 206 VMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
G + +PE + K T SDV+S+G++L E+++ G RP
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G G FG V++G V + + A + Q + F+ EV ++ + H +++ +GY T
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
Q +V ++ ++L HLH + + + IA +A+G+ YLH IIHRD+
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL 130
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTEKS 227
K+ NI L K+ DFGLA S + +H ++ G+ ++APE + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 228 DVFSFGVMLLELITGRRP 245
DV++FG++L EL+TG+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G N +VA+K LK G+ + F E ++ + H LV L T
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 112 GSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRL-KIALGSAKGLAYLHEDCHPKIIHR 169
++ EF+ +L +F +G + L +L + A+G+AY+ + IHR
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVL--LPKLIDFSAQIAEGMAYIERKNY---IHR 133
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDV 229
D++AAN+L+ K+ADFGLA++ D + APE + G T KS+V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 230 FSFGVMLLELIT-GRRP 245
+SFG++L E++T G+ P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
LG+G FG V G+ VA+K LK G G R +Q E+EI+ ++H+H+V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 106 VGYYTAGSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G ++ LV E+VP +L +L R + L A +G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 131
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASS 220
IHR + A N+LLD K+ DFGLAK + + + R G F Y APE
Sbjct: 132 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 189
Query: 221 GKLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
K SDV+SFGV L EL+T S HT
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHT 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
LG+G FG V G+ VA+K LK G G R +Q E+EI+ ++H+H+V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 106 VGYYTAGSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G ++ LV E+VP +L +L R + L A +G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 130
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASS 220
IHR + A N+LLD K+ DFGLAK + + + R G F Y APE
Sbjct: 131 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 188
Query: 221 GKLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
K SDV+SFGV L EL+T S HT
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHT 219
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 114/230 (49%), Gaps = 25/230 (10%)
Query: 35 TYEELARATDGFSDA---------NLLGQGGFGYVHRGVL--PNGKEV--AIKQLKAG-S 80
TYEE RA F+ ++G G G V G L P ++V AIK LKAG +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 81 GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--HGKGRPT 138
+ R+F +E I+ + H +++ L G T G M+V E++ N +L+ L H
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 139 MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV 198
M + L+ G G+ YL + + +HRD+ A N+L+D KV+DFGL+++ D
Sbjct: 151 MQLVGMLR---GVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 199 NTHVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
T G + APE + + SDV+SFGV++ E++ G RP
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V +VA+K +K GS E F AE ++ + H LV L T
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ EF+ +L L + + A+G+A++ + + IHRD+
Sbjct: 255 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDL 310
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ D + APE + G T KSDV+S
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 232 FGVMLLELIT-GRRP 245
FG++L+E++T GR P
Sbjct: 371 FGILLMEIVTYGRIP 385
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 21/229 (9%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER---EFQAEVEIISRVH 98
+D + +LG GG VH L + ++VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 99 HKHLVSLV----GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
H +V++ AG +V E+V TL +H +G M +++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQA 128
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV--STRVMGTFGY 212
L + H++ IIHRD+K ANIL+ KV DFG+A+ +D V + V+GT Y
Sbjct: 129 LNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA 261
L+PE A + +SDV+S G +L E++TG P F DS V A
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP------FTGDSPVSVA 228
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V +VA+K +K GS E F AE ++ + H LV L T
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 112 GSQRMLVYEFVPNNTLEFHL---HGKGRPTMDWLTRL-KIALGSAKGLAYLHEDCHPKII 167
++ EF+ +L L G +P L +L + A+G+A++ + + I
Sbjct: 82 -EPIYIITEFMAKGSLLDFLKSDEGSKQP----LPKLIDFSAQIAEGMAFIEQRNY---I 133
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
HRD++AANIL+ K+ADFGLA++ D + APE + G T KS
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 228 DVFSFGVMLLELIT-GRRP 245
DV+SFG++L+E++T GR P
Sbjct: 194 DVWSFGILLMEIVTYGRIP 212
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 20/236 (8%)
Query: 39 LARATDGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQL------KAGSGQGEREFQAEV 91
+ + F NLLG+G F V+R + G EVAIK + KAG Q Q EV
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ---RVQNEV 62
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGS 151
+I ++ H ++ L Y+ + LV E N + +L + +P + R
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQI 121
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTF 210
G+ YLH I+HRD+ +N+LL K+ADFGLA ++ H + + GT
Sbjct: 122 ITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTP 176
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDS---THTFVEDSLVDWARP 263
Y++PE A+ +SDV+S G M L+ GR P D+ +T + L D+ P
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 138
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 197
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 140
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 199
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 192
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 137
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 196
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 132
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 191
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTES 192
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 164
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 223
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 139
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 198
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 192
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 131
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 190
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 210
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 23/229 (10%)
Query: 35 TYEELARATDGFSDA---------NLLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSG 81
TYE+ +A F+ ++G G FG V G LP +E VAIK LK G
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 82 QGER-EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPTM 139
+ +R +F E I+ + H +++ L G T M+V E++ N +L+ F G+ T+
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+ + + G + G+ YL + + +HRD+ A NIL++ KV+DFGL+++ D
Sbjct: 124 --IQLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 200 THVSTRVMGTFG--YLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
T G + APE + K T SDV+S+G+++ E+++ G RP
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VA+K +K GS E EF E + + ++ H LV G +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 112 GSQRMLVYEFVPNNTLEFHL--HGKG-RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
+V E++ N L +L HGKG P+ L++ +G+A+L + IH
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPS----QLLEMCYDVCEGMAFLESH---QFIH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSD 228
RD+ A N L+D KV+DFG+ + D S + APE K + KSD
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 229 VFSFGVMLLELIT-GRRPVD 247
V++FG+++ E+ + G+ P D
Sbjct: 188 VWAFGILMWEVFSLGKMPYD 207
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 210
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L K + +D + L+ KG+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTK--- 134
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHR++ NIL++ + K+ DFGL K+ + + G F Y APE +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTES 193
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 21/229 (9%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER---EFQAEVEIISRVH 98
+D + +LG GG VH L + ++VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 99 HKHLVSLV----GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
H +V++ AG +V E+V TL +H +G M +++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQA 128
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGY 212
L + H++ IIHRD+K ANI++ KV DFG+A+ +D V+ V+GT Y
Sbjct: 129 LNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA 261
L+PE A + +SDV+S G +L E++TG P F DS V A
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP------FTGDSPVSVA 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL- 105
LG+G FG V G VA+KQL+ +R+FQ E++I+ +H +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 106 -VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
V Y + LV E++P+ L L + R +D L + KG+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR--- 130
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ +HRD+ A NIL++ + K+ADFGLAK+ R G F Y APE S
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDN 189
Query: 222 KLTEKSDVFSFGVMLLELIT 241
+ +SDV+SFGV+L EL T
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 23/216 (10%)
Query: 49 ANLLGQGGFGYVHRGV-LPNGK----EVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHL 102
+LG G FG V++G+ +P G+ VAIK L +G + EF E I++ + H HL
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK-----GRPTMDWLTRLKIALGSAKGLAY 157
V L+G + + + LV + +P+ L ++H + ++W ++ AKG+ Y
Sbjct: 80 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 132
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS-DVNTHVSTRVMGTFGYLAPE 216
L E +++HRD+ A N+L+ K+ DFGLA++ D + + ++A E
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 217 YASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHT 251
K T +SDV+S+GV + EL+T G +P D T
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER---EFQAEVEIISRVH 98
+D + +LG GG VH L + ++VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 99 HKHLVSLV----GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
H +V++ AG +V E+V TL +H +G M +++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQA 128
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGY 212
L + H++ IIHRD+K ANI++ KV DFG+A+ +D V+ V+GT Y
Sbjct: 129 LNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
L+PE A + +SDV+S G +L E++TG P
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 16/206 (7%)
Query: 51 LLGQGGFGYVHRG--VLPNGKE--VAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVSL 105
++G G FG V G LP +E VAIK LK+G + +R +F +E I+ + H +++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 106 VGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G T + M++ EF+ N +L+ F G+ T+ + + + G A G+ YL + +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYLADMNY- 130
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMG---TFGYLAPEYASS 220
+HR + A NIL++ KV+DFGL++ + D + T +G + APE
Sbjct: 131 --VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K T SDV+S+G+++ E+++ G RP
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V G+ VA+K+L+ + + R+F+ E+EI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 107 GY-YTAGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
G Y+AG + + L+ E++P +L +L +D + L+ KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASSG 221
+ IHRD+ NIL++ + K+ DFGL K+ + G F Y APE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTES 195
Query: 222 KLTEKSDVFSFGVMLLELIT 241
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGE---REFQAEVEIISRV 97
D F LG+G FG V+ K + A+K L + E + + E+EI S +
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H +++ + Y+ + L+ EF P L L GR D A L Y
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHY 129
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
HE K+IHRDIK N+L+ +K E K+ADFG + A + + GT YL PE
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEM 183
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDS-THTFVEDSLVD 259
EK D++ GV+ E + G P DS +HT +V+
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 23/216 (10%)
Query: 49 ANLLGQGGFGYVHRGV-LPNGK----EVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHL 102
+LG G FG V++G+ +P G+ VAIK L +G + EF E I++ + H HL
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK-----GRPTMDWLTRLKIALGSAKGLAY 157
V L+G + + + LV + +P+ L ++H + ++W ++ AKG+ Y
Sbjct: 103 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 155
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS-DVNTHVSTRVMGTFGYLAPE 216
L E +++HRD+ A N+L+ K+ DFGLA++ D + + ++A E
Sbjct: 156 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 217 YASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHT 251
K T +SDV+S+GV + EL+T G +P D T
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 88
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 143
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
A L+Y H ++IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 144 -ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 196
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGE---REFQAEVEIISRV 97
D F LG+G FG V+ K + A+K L + E + + E+EI S +
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H +++ + Y+ + L+ EF P L L GR D A L Y
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHY 130
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
HE K+IHRDIK N+L+ +K E K+ADFG + A + + GT YL PE
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEM 184
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDS-THTFVEDSLVD 259
EK D++ GV+ E + G P DS +HT +V+
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 227
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGE---REFQAEVEIISRV 97
D F LG+G FG V+ K + A+K L + E + + E+EI S +
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H +++ + Y+ + L+ EF P L L GR D A L Y
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHY 129
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
HE K+IHRDIK N+L+ +K E K+ADFG + A + + GT YL PE
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEM 183
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDS-THTFVEDSLVD 259
EK D++ GV+ E + G P DS +HT +V+
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 79
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 134
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 135 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 186
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 243
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 52 LGQGGFG--YVHRGVLPNGKEVAIKQLKAGSGQGE---REFQAEVEIISRVHHKHLVSLV 106
LG GG Y+ + N K VAIK + + E + F+ EV S++ H+++VS++
Sbjct: 19 LGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
LV E++ TL ++ G ++D T + G+ + H+ +I
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD--TAINFTNQILDGIKHAHD---MRI 132
Query: 167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEK 226
+HRDIK NIL+D K+ DFG+AK S+ + + V+GT Y +PE A E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 227 SDVFSFGVMLLELITGRRP 245
+D++S G++L E++ G P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ N K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMG 208
A L+Y H K+IHRDIK N+LL E K+ADFG + V+ S R + G
Sbjct: 118 -ANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCG 168
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDS 248
T YL PE EK D++S GV+ E + G+ P ++
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
A L+Y H ++IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 118 -ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTL 170
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
LG+G FG V G+ VA+K LKA +G R ++ E++I+ ++H+H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 106 VGYYT-AGSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G AG+ + LV E+VP +L +L R ++ L A +G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 153
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASS 220
IHRD+ A N+LLD K+ DFGLAK + + R G F Y APE
Sbjct: 154 -HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKE 211
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
K SDV+SFGV L EL+T
Sbjct: 212 YKFYYASDVWSFGVTLYELLT 232
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 122
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 123 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 25/231 (10%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER---EFQAEVEIISRVH 98
+D + +LG GG VH L ++VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 99 HKHLVSLVGYYT------AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
H +V++ Y T AG +V E+V TL +H +G M +++ +
Sbjct: 71 HPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADAC 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTF 210
+ L + H++ IIHRD+K ANI++ KV DFG+A+ +D V+ V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA 261
YL+PE A + +SDV+S G +L E++TG P F DS V A
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP------FTGDSPVSVA 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 96 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 146
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 243
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 115 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 165
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 166 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 121 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 172
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 97 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 147
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
A L+Y H ++IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 118 -ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 170
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
LG+G FG V G++VA+K LK SG + + E+EI+ ++H+++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 106 VGYYT--AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G T G+ L+ EF+P+ +L+ +L K + ++ +LK A+ KG+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAK-IASD--VNTHVSTRVMGTFGYLAPEYASS 220
+ +HRD+ A N+L++ + + K+ DFGL K I +D T R F Y APE
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQ 203
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
K SDV+SFGV L EL+T
Sbjct: 204 SKFYIASDVWSFGVTLHELLT 224
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 122
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 123 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 89 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 139
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 140 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 116 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 166
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 167 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
LG+G FG V G++VA+K LK SG + + E+EI+ ++H+++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 106 VGYYT--AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G T G+ L+ EF+P+ +L+ +L K + ++ +LK A+ KG+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAK-IASD--VNTHVSTRVMGTFGYLAPEYASS 220
+ +HRD+ A N+L++ + + K+ DFGL K I +D T R F Y APE
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQ 191
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
K SDV+SFGV L EL+T
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 21/229 (9%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER---EFQAEVEIISRVH 98
+D + +LG GG VH L ++VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 99 HKHLVSLV----GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
H +V++ AG +V E+V TL +H +G M +++ + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQA 128
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGY 212
L + H++ IIHRD+K ANI++ KV DFG+A+ +D V+ V+GT Y
Sbjct: 129 LNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA 261
L+PE A + +SDV+S G +L E++TG P F DS V A
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP------FTGDSPVSVA 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
LG+G FG V G+ VA+K LKA G R ++ E++I+ ++H+H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 106 VGYYTAGSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G ++ LV E+VP +L +L R ++ L A +G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-- 136
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASS 220
IHR++ A N+LLD K+ DFGLAK + + + R G F Y APE
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 194
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
K SDV+SFGV L EL+T
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEIISR 96
+ F LG+G FG V+ K + A+K L KAG E + + EVEI S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALGSA 152
+ H +++ L GY+ ++ L+ E+ P T+ L R T ++T L A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------A 122
Query: 153 KGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 123 NALSY----CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLD 175
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE 254
YL PE EK D++S GV+ E + G P ++ HT+ E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA-HTYQE 217
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 63
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 118
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 119 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 170
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 92 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 142
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 143 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 239
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 122
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 123 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 174
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 33/238 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 88
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 143
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMG 208
A L+Y H ++IHRDIK N+LL E K+ADFG + V+ S R + G
Sbjct: 144 -ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDDLCG 194
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
T YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 252
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 63
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 118
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 119 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGT 170
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 94 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 144
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 145 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 241
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
LG+G FG V G+ VA+K LKA G R ++ E++I+ ++H+H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 106 VGYYTAGSQR--MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G ++ LV E+VP +L +L R ++ L A +G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 136
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG---TFGYLAPEYASS 220
IHR++ A N+LLD K+ DFGLAK + + + R G F Y APE
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKE 194
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
K SDV+SFGV L EL+T
Sbjct: 195 YKFYYASDVWSFGVTLYELLT 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V +VA+K +K GS E F AE ++ + H LV L T
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ EF+ +L L + + A+G+A++ + + IHRD+
Sbjct: 249 -EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDL 304
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
+AANIL+ K+ADFGLA++ + + APE + G T KSDV+S
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAKF----------PIKWTAPEAINFGSFTIKSDVWS 354
Query: 232 FGVMLLELIT-GRRP 245
FG++L+E++T GR P
Sbjct: 355 FGILLMEIVTYGRIP 369
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 95 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 145
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 146 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 242
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 118 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 169
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 118 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGT 169
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 96 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 146
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 243
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 118 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 169
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 97 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 147
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD---VNTHVSTRVMGTFGYL 213
YL K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGER--EFQAEVEIISRVHHKHLVSLVGYY 109
+G G FG V++G +VA+K LK E+ F+ EV ++ + H +++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
T + +V ++ ++L HLH + + IA +A+G+ YLH IIHR
Sbjct: 102 TKDN-LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHR 156
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYA---SSGKLTE 225
D+K+ NI L K+ DFGLA + S + + + G+ ++APE + +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 226 KSDVFSFGVMLLELITGRRP 245
+SDV+S+G++L EL+TG P
Sbjct: 217 QSDVYSYGIVLYELMTGELP 236
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 121 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 172
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 61
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 116
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 117 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 168
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDS 248
YL PE EK D++S GV+ E + G+ P ++
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 66
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 121
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 122 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 173
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 52 LGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V +LP + VA+K LK S ++FQ E E+++ + H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLT--------------RLKIALGS 151
G T G ++V+E++ + L L G P L L +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
A G+ YL H +HRD+ N L+ K+ DFG+++ I S V R M
Sbjct: 145 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 52 LGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V +LP + VA+K LK S ++FQ E E+++ + H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLT--------------RLKIALGS 151
G T G ++V+E++ + L L G P L L +A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
A G+ YL H +HRD+ N L+ K+ DFG+++ I S V R M
Sbjct: 168 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG GGFGYV R + + G++VAIKQ + RE + E++I+ +++H ++VS
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 81
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG------------LAY 157
G Q++ + P +E+ G R +L + + G +G L Y
Sbjct: 82 PDGLQKLAPNDL-PLLAMEYCEGGDLR---KYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 158 LHEDCHPKIIHRDIKAANILLD---FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LHE+ +IIHRD+K NI+L + K+ D G AK + T +GT YLA
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLA 192
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
PE K T D +SFG + E ITG RP
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG GGFGYV R + + G++VAIKQ + RE + E++I+ +++H ++VS
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 80
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG------------LAY 157
G Q++ + P +E+ G R +L + + G +G L Y
Sbjct: 81 PDGLQKLAPNDL-PLLAMEYCEGGDLR---KYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 158 LHEDCHPKIIHRDIKAANILLD---FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LHE+ +IIHRD+K NI+L + K+ D G AK + T +GT YLA
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLA 191
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
PE K T D +SFG + E ITG RP
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 52 LGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V +LP + VA+K LK S ++FQ E E+++ + H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLT--------------RLKIALGS 151
G T G ++V+E++ + L L G P L L +A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
A G+ YL H +HRD+ N L+ K+ DFG+++ I S V R M
Sbjct: 139 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P + L + T ++T L
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL----- 122
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 123 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 25/231 (10%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER---EFQAEVEIISRVH 98
+D + +LG GG VH L ++VA+K L+A + F+ E + + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 99 HKHLVSLVGYYT------AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
H +V++ Y T AG +V E+V TL +H +G M +++ +
Sbjct: 88 HPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADAC 143
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTF 210
+ L + H++ IIHRD+K ANI++ KV DFG+A+ +D V+ V+GT
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA 261
YL+PE A + +SDV+S G +L E++TG P F DS V A
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP------FTGDSPVSVA 245
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 35/239 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 64
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 119
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 120 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLC 169
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
GT YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 9/214 (4%)
Query: 39 LARATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLK-AGSGQGEREFQAEVEIISR 96
+A + F+ +G+G FG V +G+ ++V AIK + + + Q E+ ++S+
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLA 156
++ G Y GS+ ++ E++ + L T LK L KGL
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLD 134
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
YLH + K IHRDIKAAN+LL + + K+ADFG+A +D +T V GT ++APE
Sbjct: 135 YLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPE 190
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
K+D++S G+ +EL G P H
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 35/239 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 63
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 118
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 119 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDTLC 168
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
GT YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 33/238 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMG 208
A L+Y H ++IHRDIK N+LL E K+ADFG + V+ S R + G
Sbjct: 121 -ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALCG 171
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
T YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 59
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 114
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+ADFG + A T + GT
Sbjct: 115 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 166
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDS 248
YL PE EK D++S GV+ E + G+ P ++
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 64
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 119
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+A+FG + A T + GT
Sbjct: 120 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGT 171
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEIISR 96
+ F LG+G FG V+ K + A+K L KAG E + + EVEI S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALGSA 152
+ H +++ L GY+ ++ L+ E+ P T+ L R T ++T L A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------A 122
Query: 153 KGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGT 209
L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R + GT
Sbjct: 123 NALSY----CHSKRVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRDTLCGT 173
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE 254
YL PE EK D++S GV+ E + G P ++ HT+ E
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA-HTYQE 217
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 156 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 206
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 207 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 303
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L+Y CH K +IHRDIK N+LL E K+A+FG + A T + GT
Sbjct: 121 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGT 172
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 35/239 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 121 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLC 170
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
GT YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 121 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRDDLC 170
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDS 248
GT YL PE EK D++S GV+ E + G+ P ++
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 35/239 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 118 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLC 167
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
GT YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 35/239 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P T+ L + T ++T L
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 118 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRAALC 167
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
GT YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 97 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 147
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 95 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 145
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 146 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 242
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 98 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 148
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 245
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 97 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 147
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 244
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 102 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 152
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 153 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 249
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 109/220 (49%), Gaps = 30/220 (13%)
Query: 51 LLGQGGFGYVHRGVL--PNGKEV--AIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSL 105
++G+G FG V+ G L +GK++ A+K L + GE +F E I+ H +++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---------PTMDWLTRLKIALGSAKGLA 156
+G L E P L + HG R PT+ L + L AKG+
Sbjct: 98 LGI-------CLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQVAKGMK 148
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV---NTHVSTRVMGTFGYL 213
+L K +HRD+ A N +LD KF KVADFGLA+ D + H T ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTF 252
A E + K T KSDV+SFGV+L EL+T G P +TF
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 245
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+++H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 112/239 (46%), Gaps = 35/239 (14%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL------KAGSGQGEREFQAEVEII 94
A + F LG+G FG V+ K + A+K L KAG E + + EVEI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
S + H +++ L GY+ ++ L+ E+ P + L + T ++T L
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL----- 122
Query: 151 SAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VM 207
A L+Y CH K +IHRDIK N+LL E K+ADFG + V+ S R +
Sbjct: 123 -ANALSY----CHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLX 172
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST---HTFVEDSLVDWARP 263
GT YL PE EK D++S GV+ E + G+ P ++ T+ S V++ P
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 48 DANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
D +LG+G +G V+ G L N +AIK++ + + E+ + + HK++V +
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPK 165
G ++ + E VP +L L K P D + +GL YLH++ +
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 166 IIHRDIKAANILLD-FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK-- 222
I+HRDIK N+L++ + K++DFG +K + +N T GT Y+APE G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRG 201
Query: 223 LTEKSDVFSFGVMLLELITGRRP 245
+ +D++S G ++E+ TG+ P
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPP 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 16/198 (8%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V G G +VA+K +K + + F AE +++++ H +LV L+G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 112 GSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+ +V E++ +L +L +GR + LK +L + + YL + +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 314
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASSGKLTEKSD 228
+ A N+L+ AKV+DFGL K AS ST+ G + APE K + KSD
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 229 VFSFGVMLLELIT-GRRP 245
V+SFG++L E+ + GR P
Sbjct: 369 VWSFGILLWEIYSFGRVP 386
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+++H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 16/198 (8%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V G G +VA+K +K + + F AE +++++ H +LV L+G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 112 GSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+ +V E++ +L +L +GR + LK +L + + YL + +HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 142
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASSGKLTEKSD 228
+ A N+L+ AKV+DFGL K AS ST+ G + APE K + KSD
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 229 VFSFGVMLLELIT-GRRP 245
V+SFG++L E+ + GR P
Sbjct: 197 VWSFGILLWEIYSFGRVP 214
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 16/198 (8%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V G G +VA+K +K + + F AE +++++ H +LV L+G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 112 GSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+ +V E++ +L +L +GR + LK +L + + YL + +HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 127
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASSGKLTEKSD 228
+ A N+L+ AKV+DFGL K AS ST+ G + APE K + KSD
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 229 VFSFGVMLLELIT-GRRP 245
V+SFG++L E+ + GR P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
F +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 123
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 50 NLLGQGGFGYVHRGV-LPNGKE----VAIKQLKAGSGQGEREFQAEVE---IISRVHHKH 101
+LG G FG VH+GV +P G+ V IK ++ SG+ + FQA + I + H H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAH 94
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
+V L+G GS LV +++P +L H+ + R + L + AKG+ YL E
Sbjct: 95 IVRLLGL-CPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFGYLAPEYASS 220
++HR++ A N+LL + +VADFG+A + D + + ++A E
Sbjct: 153 ---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
GK T +SDV+S+GV + EL+T
Sbjct: 210 GKYTHQSDVWSYGVTVWELMT 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 48 DANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
D +LG+G +G V+ G L N +AIK++ + + E+ + + HK++V +
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPK 165
G ++ + E VP +L L K P D + +GL YLH++ +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 166 IIHRDIKAANILLD-FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK-- 222
I+HRDIK N+L++ + K++DFG +K + +N T GT Y+APE G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRG 187
Query: 223 LTEKSDVFSFGVMLLELITGRRP 245
+ +D++S G ++E+ TG+ P
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPP 210
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER 85
S F +E + + + LGQG FG V+ G ++ E VA+K + + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGR 136
EF E ++ H+V L+G + G ++V E + + L+ +L + GR
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 137 PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
P +++A A G+AYL+ K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 178
Query: 197 DVNTHVSTRVMG----TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
D+ R G ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER 85
S F +E + + + LGQG FG V+ G ++ E VA+K + + ER
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGR 136
EF E ++ H+V L+G + G ++V E + + L+ +L + GR
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 137 PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
P +++A A G+AYL+ K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 175
Query: 197 DVNTHVSTRVMG----TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
D+ R G ++APE G T SD++SFGV+L E+ +
Sbjct: 176 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G FG V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 231 SFGVMLLELIT-GRRP---VDSTHTF 252
+FGV+L E+ T G P +D + +
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 27/229 (11%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 126
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--- 180
Query: 197 DVNTHVSTRVMGT----FGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
D+ R G +++PE G T SDV+SFGV+L E+ T
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 50 NLLGQGGFGYVHRGV-LPNGKE----VAIKQLKAGSGQGEREFQAEVE---IISRVHHKH 101
+LG G FG VH+GV +P G+ V IK ++ SG+ + FQA + I + H H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAH 76
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
+V L+G GS LV +++P +L H+ + R + L + AKG+ YL E
Sbjct: 77 IVRLLGL-CPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFGYLAPEYASS 220
++HR++ A N+LL + +VADFG+A + D + + ++A E
Sbjct: 135 ---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 221 GKLTEKSDVFSFGVMLLELIT 241
GK T +SDV+S+GV + EL+T
Sbjct: 192 GKYTHQSDVWSYGVTVWELMT 212
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 52 LGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V + P + VA+K LK S ++F E E+++ + H+H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 106 VGYYTAGSQRMLVYEFVP----NNTLEFH-----LHGKGRPTMDWLTR---LKIALGSAK 153
G G ++V+E++ N L H L +G P + LT+ L IA A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQMLHIAQQIAA 139
Query: 154 GLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFGY 212
G+ YL +HRD+ N L+ K+ DFG+++ + S V M +
Sbjct: 140 GMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
+ PE K T +SDV+S GV+L E+ T G++P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG+G +G V++ + G+ VAIKQ+ S +E E+ I+ + H+V G Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIAL---GSAKGLAYLHEDCHPKII 167
+ +V E+ ++ + + + LT +IA + KGL YLH + I
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKGLEYLH---FMRKI 147
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
HRDIKA NILL+ + AK+ADFG+A +D V+GT ++APE +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 228 DVFSFGVMLLELITGRRPVDSTH 250
D++S G+ +E+ G+ P H
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIH 229
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 137
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 198 AFGVLLWEIAT 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 27/225 (12%)
Query: 37 EELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER-EFQA 89
+E A + + + LGQG FG V+ +GV+ + E VAIK + + ER EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 90 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD--------W 141
E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPS 121
Query: 142 LTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT 200
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ + D+
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---DIXE 175
Query: 201 HVSTRVMG----TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
R G +++PE G T SDV+SFGV+L E+ T
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 132
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 137
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 198 AFGVLLWEIAT 208
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 51 LLGQGGFGYVHRGVLPNGK----EVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+LG+G FG V+ GV N K VA+K K +E F +E I+ + H H+V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE-DCHP 164
+G ++ E P L +L + + ++ LT + +L K +AYL +C
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC-- 130
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT 224
+HRDI NIL+ K+ DFGL++ D + + ++ +++PE + + T
Sbjct: 131 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 225 EKSDVFSFGVMLLELIT-GRRP 245
SDV+ F V + E+++ G++P
Sbjct: 189 TASDVWMFAVCMWEILSFGKQP 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V G G +VA+K +K + + F AE +++++ H +LV L+G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 112 GSQRM-LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+ +V E++ +L +L +GR + LK +L + + YL + +HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 133
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASSGKLTEKSD 228
+ A N+L+ AKV+DFGL K AS ST+ G + APE + KSD
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 229 VFSFGVMLLELIT-GRRP 245
V+SFG++L E+ + GR P
Sbjct: 188 VWSFGILLWEIYSFGRVP 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER 85
S F +E + + + LGQG FG V+ G ++ E VA+K + + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGR 136
EF E ++ H+V L+G + G ++V E + + L+ +L + GR
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 137 PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
P +++A A G+AYL+ K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 178
Query: 197 DVNTHVSTRVMG----TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
D+ R G ++APE G T SD++SFGV+L E+ +
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 125
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER 85
S F +E + + + LGQG FG V+ G ++ E VA+K + + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 86 -EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGR 136
EF E ++ H+V L+G + G ++V E + + L+ +L + GR
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 137 PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
P +++A A G+AYL+ K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 197 DVNTHVS-TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + ++APE G T SD++SFGV+L E+ +
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 51 LLGQGGFGYVHRGVLPNGK----EVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+LG+G FG V+ GV N K VA+K K +E F +E I+ + H H+V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE-DCHP 164
+G ++ E P L +L + + ++ LT + +L K +AYL +C
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC-- 146
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT 224
+HRDI NIL+ K+ DFGL++ D + + ++ +++PE + + T
Sbjct: 147 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 225 EKSDVFSFGVMLLELIT-GRRP 245
SDV+ F V + E+++ G++P
Sbjct: 205 TASDVWMFAVCMWEILSFGKQP 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 126
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V+ G + P+ +VA+K L + S Q E +F E IIS+ +H+++V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPT----MDWLTRLKIALGSAKGLAYLH 159
+G R ++ E + L+ F + RP+ + L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAP 215
E+ IHRDI A N LL +VA G +A D+ R M ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T K+D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 138
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 199 AFGVLLWEIAT 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 52 LGQGGFGYVHRGVLPNGK---EVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSLVG 107
LG G FG V +GV K +VAIK LK G+ + + E E +I+ ++ + ++V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKII 167
A + MLV E L L GK R + ++ + G+ YL E +
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFV 132
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASSGKLTE 225
HRD+ A N+LL + AK++DFGL+K +++ + R G + + APE + K +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
+SDV+S+GV + E ++ G++P
Sbjct: 193 RSDVWSYGVTMWEALSYGQKP 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 51 LLGQGGFGYVHRGVLPNGK----EVAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+LG+G FG V+ GV N K VA+K K +E F +E I+ + H H+V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE-DCHP 164
+G ++ E P L +L + + ++ LT + +L K +AYL +C
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC-- 134
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT 224
+HRDI NIL+ K+ DFGL++ D + + ++ +++PE + + T
Sbjct: 135 --VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 225 EKSDVFSFGVMLLELIT-GRRP 245
SDV+ F V + E+++ G++P
Sbjct: 193 TASDVWMFAVCMWEILSFGKQP 214
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 125
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 52 LGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVS 104
LGQG FG V+ G ++ E VA+K + + ER EF E ++ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGRPTMDWLTRLKIALGSAKGLA 156
L+G + G ++V E + + L+ +L + GRP +++A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG----TFGY 212
YL+ K +HRD+ A N ++ F K+ DFG+ + D+ R G +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR---DIXETDXXRKGGKGLLPVRW 198
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+APE G T SD++SFGV+L E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 231 SFGVMLLELIT-GRRP---VDSTHTF 252
+FGV+L E+ T G P +D + +
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 37 EELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER-EFQA 89
+E A + + + LGQG FG V+ +GV+ + E VAIK + + ER EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 90 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD--------W 141
E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPS 123
Query: 142 LTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT 200
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ + + +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 201 HVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTM------ 139
EF E ++ + H+V L+G + G +++ E + L+ +L RP M
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPAMANNPVL 132
Query: 140 ---DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
+++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 140
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 201 AFGVLLWEIAT 211
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 138
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 199 AFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 149
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 210 AFGVLLWEIAT 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 138
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 199 AFGVLLWEIAT 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 154
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 51 LLGQGGFG----YVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
+LG+G FG HR G+ + +K+L + +R F EV+++ + H +++ +
Sbjct: 17 VLGKGCFGQAIKVTHRE---TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----WLTRLKIALGSAKGLAYLHEDC 162
G + + E++ TL + +MD W R+ A A G+AYLH
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIK-----SMDSQYPWSQRVSFAKDIASGMAYLHSM- 127
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS-------------TRVMGT 209
IIHRD+ + N L+ VADFGLA++ D T V+G
Sbjct: 128 --NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELI 240
++APE + EK DVFSFG++L E+I
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 46 FSDANLLGQGGFG--YVHRGVLPNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHHK 100
FSD +G G FG Y R V N + VAIK++ Q ++Q EV + ++ H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 101 HLVSLVGYYTAGSQRMLVYEFV---PNNTLEFHLHGKGRPTMDWLTRLKIAL---GSAKG 154
+ + G Y LV E+ ++ LE H +P L ++IA G+ +G
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKP----LQEVEIAAVTHGALQG 166
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LAYLH +IHRD+KA NILL K+ DFG A I + N V GT ++A
Sbjct: 167 LAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMA 218
Query: 215 PEY---ASSGKLTEKSDVFSFGVMLLELITGRRPV 246
PE G+ K DV+S G+ +EL + P+
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTM------ 139
EF E ++ + H+V L+G + G +++ E + L+ +L RP M
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPAMANNPVL 122
Query: 140 ---DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
+++A A G+AYL+ + K +HRD+ A N ++ F K+ DFG+ +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 136
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 31/215 (14%)
Query: 46 FSDANLLGQGGFG--YVHRGVLPNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHHK 100
FSD +G G FG Y R V N + VAIK++ Q ++Q EV + ++ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVR-NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 101 HLVSLVGYYTAGSQRMLVYEFV---PNNTLEFHLHGKGRPTMDWLTRLKIAL---GSAKG 154
+ + G Y LV E+ ++ LE H +P L ++IA G+ +G
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKP----LQEVEIAAVTHGALQG 127
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LAYLH +IHRD+KA NILL K+ DFG A I + N V GT ++A
Sbjct: 128 LAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMA 179
Query: 215 PEY---ASSGKLTEKSDVFSFGVMLLELITGRRPV 246
PE G+ K DV+S G+ +EL + P+
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVS 104
LGQG FG V+ G ++ E VA+K + + ER EF E ++ H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGRPTMDWLTRLKIALGSAKGLA 156
L+G + G ++V E + + L+ +L + GRP +++A A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS-TRVMGTFGYLAP 215
YL+ K +HRD+ A N ++ F K+ DFG+ + + + + + + ++AP
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T SD++SFGV+L E+ +
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRD 134
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 231 SFGVMLLELIT-GRRP---VDSTHTF 252
+FGV+L E+ T G P +D + +
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVY 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 21/226 (9%)
Query: 33 TFTYEELARATDGFSDANLLGQGGFGYVH----RGVLPNGKE--VAIKQLKAGSGQGER- 85
+ +E A + + + LGQG FG V+ +GV+ + E VAIK + + ER
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----- 140
EF E ++ + H+V L+G + G +++ E + L+ +L RP M+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 119
Query: 141 ---WLTRL-KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
L+++ ++A A G+AYL+ + K +HRD+ A N + F K+ DFG+ +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 197 DVNTHVST-RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ + + + + +++PE G T SDV+SFGV+L E+ T
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHR+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRN 340
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 401 AFGVLLWEIAT 411
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+V E++P L +L R + + L +A + + YL + IHRD
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRD 155
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + + KSDV+
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 231 SFGVMLLELIT-GRRP 245
+FGV+L E+ T G P
Sbjct: 216 AFGVLLWEIATYGMSP 231
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 52 LGQGGFGYVHRGVLPNGKE------VAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V N VA+K LK + ++FQ E E+++ + H+H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWL--------------TRLKIALGS 151
G G ++V+E++ + L L G M + L IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
A G+ YL +HRD+ N L+ K+ DFG+++ + S V M
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
++ PE K T +SDV+SFGV+L E+ T G++P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R ++ + L +A + + YL + IHR+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRN 382
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 443 AFGVLLWEIAT 453
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 52 LGQGGFGYVHRGVLPNGK---EVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSLVG 107
LG G FG V +GV K +VAIK LK G+ + + E E +I+ ++ + ++V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKII 167
A + MLV E L L GK R + ++ + G+ YL E +
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFV 458
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG--YLAPEYASSGKLTE 225
HR++ A N+LL + AK++DFGL+K +++ + R G + + APE + K +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
+SDV+S+GV + E ++ G++P
Sbjct: 519 RSDVWSYGVTMWEALSYGQKP 539
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G +G V+ GV VA+K LK + + E EF E ++ + H +LV L+G T
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ EF+ L +L R + + L +A + + YL + IHR+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRN 343
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
+ A N L+ KVADFGL+++ + + APE + K + KSDV+
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 231 SFGVMLLELIT 241
+FGV+L E+ T
Sbjct: 404 AFGVLLWEIAT 414
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 46 FSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQ---GEREFQAEVEIISRVHHKH 101
F +LG+GGFG V V GK A K+L+ + GE E +I+ +V+ +
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
+VSL Y LV + L+FH++ G+ + A GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
+I++RD+K NILLD +++D GLA + T + RV GT GY+APE +
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNE 360
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
+ T D ++ G +L E+I G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 46 FSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQ---GEREFQAEVEIISRVHHKH 101
F +LG+GGFG V V GK A K+L+ + GE E +I+ +V+ +
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
+VSL Y LV + L+FH++ G+ + A GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
+I++RD+K NILLD +++D GLA + T + RV GT GY+APE +
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNE 360
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
+ T D ++ G +L E+I G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 33/215 (15%)
Query: 50 NLLGQGGFGYVHRGVL----PNGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHLVS 104
++G+G FG V+ G N + AIK L + Q F E ++ ++H ++++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG---------KGRPTMDWLTRLKIALGSAKGL 155
L+G ML E +P+ L + HG + PT+ L + L A+G+
Sbjct: 87 LIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL--ISFGLQVARGM 137
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD-----VNTHVSTRVMGTF 210
YL E K +HRD+ A N +LD F KVADFGLA+ D V H R+
Sbjct: 138 EYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PV 192
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ A E + + T KSDV+SFGV+L EL+T P
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 146
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 207 FGVLMWEIYSLGKMPYE 223
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVS 104
LGQG FG V+ G ++ E VA+K + + ER EF E ++ H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGRPTMDWLTRLKIALGSAKGLA 156
L+G + G ++V E + + L+ +L + GRP +++A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST-RVMGTFGYLAP 215
YL+ K +HR++ A N ++ F K+ DFG+ + + + + + + ++AP
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T SD++SFGV+L E+ +
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 146
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 207 FGVLMWEIYSLGKMPYE 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 52 LGQGGFGYVHRG----VLPNGKE--VAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVS 104
LGQG FG V+ G ++ E VA+K + + ER EF E ++ H+V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHL--------HGKGRPTMDWLTRLKIALGSAKGLA 156
L+G + G ++V E + + L+ +L + GRP +++A A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST-RVMGTFGYLAP 215
YL+ K +HR++ A N ++ F K+ DFG+ + + + + + + ++AP
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 216 EYASSGKLTEKSDVFSFGVMLLELIT 241
E G T SD++SFGV+L E+ +
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 137
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 198 FGVLMWEIYSLGKMPYE 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 130
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 191 FGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 131
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 192 FGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 126
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 187 FGVLMWEIYSLGKMPYE 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 24/209 (11%)
Query: 52 LGQGGFG-YVHRGVLPNGKE-----VAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V GKE VA+K LK+ + E+E +E++I+S + H+++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK---------GRPTMDWLTRLKIALGSAKG 154
+L+G T G +++ E+ L L K GRP ++ L + A+G
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQG 172
Query: 155 LAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFGY 212
+A+L ++C IHRD+ A N+LL AK+ DFGLA+ I +D N V +
Sbjct: 173 MAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 228
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+APE T +SDV+S+G++L E+ +
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLK-AGSGQGEREFQAEVEIISRVHHKHLV 103
F+ + +G+G FG V++G+ + KEV AIK + + + Q E+ ++S+ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 104 SLVGYYTAGSQRMLVYEFVPN-NTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G Y ++ ++ E++ + L+ G T T L+ L KGL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-ATILREIL---KGLDYLHSE- 135
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
+ IHRDIKAAN+LL + + K+ADFG+A +D + V GT ++APE
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSA 192
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDSTH 250
K+D++S G+ +EL G P H
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLH 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 24/209 (11%)
Query: 52 LGQGGFG-YVHRGVLPNGKE-----VAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V GKE VA+K LK+ + E+E +E++I+S + H+++V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK---------GRPTMDWLTRLKIALGSAKG 154
+L+G T G +++ E+ L L K GRP ++ L + A+G
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLHFSSQVAQG 164
Query: 155 LAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFGY 212
+A+L ++C IHRD+ A N+LL AK+ DFGLA+ I +D N V +
Sbjct: 165 MAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 220
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+APE T +SDV+S+G++L E+ +
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 26/212 (12%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
F + L+G GGFG V + +GK IK++K + + ERE +A ++++ H ++V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIVH 68
Query: 105 LVGYY----------TAGSQR------MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIA 148
G + + S R + EF TLE + + +D + L++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
KG+ Y+H K+I+RD+K +NI L + K+ DFGL + S N R G
Sbjct: 129 EQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKG 183
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELI 240
T Y++PE SS ++ D+++ G++L EL+
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHHKHLV 103
F+ +G+G FG V +G+ K VAIK + + + Q E+ ++S+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G Y ++ ++ E++ + L T L+ L KGL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 123
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K IHRDIKAAN+LL E K+ADFG+A +D +T V GT ++APE
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAY 181
Query: 224 TEKSDVFSFGVMLLELITGRRPVDSTH 250
K+D++S G+ +EL G P H
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHHKHLV 103
F+ +G+G FG V +G+ K VAIK + + + Q E+ ++S+ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G Y ++ ++ E++ + L T L+ L KGL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 143
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K IHRDIKAAN+LL E K+ADFG+A +D +T V GT ++APE
Sbjct: 144 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAY 201
Query: 224 TEKSDVFSFGVMLLELITGRRPVDSTH 250
K+D++S G+ +EL G P H
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELH 228
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 64
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 122
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
L E H KI+HRD+K +NIL++ + E K+ DFG ++ + ++ +GT Y++PE
Sbjct: 123 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFG---VSGQLIDEMANEFVGTRSYMSPER 177
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF-VEDSLVDWARPLLNRAIEDGNFDT 276
+ +SD++S G+ L+E+ GR P F + D +V+ P L A+ F
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQD 237
Query: 277 LVDPKL 282
V+ L
Sbjct: 238 FVNKCL 243
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG G FG V G +VAIK +K GS E EF E +++ + H+ LV L G T
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDI 171
++ E++ N L +L + R L++ + + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL 131
Query: 172 KAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFS 231
A N L++ + KV+DFGL++ D S + PE K + KSD+++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 232 FGVMLLELIT-GRRPVD 247
FGV++ E+ + G+ P +
Sbjct: 192 FGVLMWEIYSLGKMPYE 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
F + L+G GGFG V + +GK I+++K + + ERE +A ++++ H ++V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIVH 69
Query: 105 LVGYY-----------------------TAGSQR------MLVYEFVPNNTLEFHLHGKG 135
G + + S R + EF TLE + +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 136 RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA 195
+D + L++ KG+ Y+H K+IHRD+K +NI L + K+ DFGL +
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGL--VT 184
Query: 196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI 240
S N TR GT Y++PE SS ++ D+++ G++L EL+
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+GQG G V+ + + G+EVAI+Q+ + E+ ++ + ++V+ + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
G + +V E++ +L + MD + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
IK+ NILL K+ DFG + + ST V GT ++APE + K D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 231 SFGVMLLELITGRRP 245
S G+M +E+I G P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM----------DWLTRLKIALGS- 151
+L+G T G M++ EF L +L K + D+LT + S
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 152 --AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMG 208
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V + GK+VA+K++ Q EV I+ HH ++V + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+YLH +IHR
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQ---GVIHR 165
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGF---CAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E+I G P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 74 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 189 ASDVWMFGVCMWEILMHGVKP 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKP 212
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 79 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 194 ASDVWMFGVCMWEILMHGVKP 214
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKP 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 105 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 220 ASDVWMFGVCMWEILMHGVKP 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGE-REFQAEV 91
FT E+L D +G+G +G V++ V P+G+ +A+K++++ + E ++ ++
Sbjct: 19 FTAEDL-------KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 92 EIISRVHH-KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH--LHGKGRPTMDWLTRLKIA 148
+++ R ++V G + E + + +F+ ++ + KI
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L + K L +L E+ KIIHRDIK +NILLD K+ DFG++ V++ TR G
Sbjct: 132 LATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSIAKTRDAG 187
Query: 209 TFGYLAPEY----ASSGKLTEKSDVFSFGVMLLELITGRRP 245
Y+APE AS +SDV+S G+ L EL TGR P
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTRLKIALGS 151
+L+G T G M++ EF L +L K + D+LT + S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 152 ---AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 80 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 195 ASDVWMFGVCMWEILMHGVKP 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM---------DWLTR---LKIALG 150
+L+G T G M++ EF L +L K + D+LT + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGT 209
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 189
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 187
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 82 IGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 197 ASDVWMFGVCMWEILMHGVKP 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 186
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 457 IGVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 572 ASDVWMFGVCMWEILMHGVKP 592
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 457 IGVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 572 ASDVWMFGVCMWEILMHGVKP 592
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 188
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTR---LKIA 148
+L+G T G M++ EF L +L K + D+LT + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G S L+ + +P L E + + ++W ++ AKG
Sbjct: 102 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 210
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 139
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 195
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D + +++ ++APE + + T
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKP 212
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTRLKIALGS 151
+L+G T G M++ EF L +L K + D+LT + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 152 ---AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 187
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 52 LGQGGFG-YVHRGVLPNGKE-----VAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V GKE VA+K LK+ + E+E +E++I+S + H+++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR------------PTMDWLTRLKIALGS 151
+L+G T G +++ E+ L L K R T+ L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 152 AKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGT 209
A+G+A+L ++C IHRD+ A N+LL AK+ DFGLA+ I +D N V
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+S+G++L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 188
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTR---LKIA 148
+L+G T G M++ EF L +L K + D+LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 188
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 135
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 191
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 192
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-------DWLTRLKIALGS---A 152
+L+G T G M++ EF L +L K + D+LT + S A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFG 211
KG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 188
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHHKHLV 103
F+ +G+G FG V +G+ K VAIK + + + Q E+ ++S+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G Y ++ ++ E++ + L T L+ L KGL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 138
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K IHRDIKAAN+LL E K+ADFG+A +D + V GT ++APE
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAY 196
Query: 224 TEKSDVFSFGVMLLELITGRRPVDSTH 250
K+D++S G+ +EL G P H
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELH 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G S L+ + +P L E + + ++W ++ AKG
Sbjct: 77 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQL---KAGSGQGEREFQAEVEIISRVHHKHLVSLVG 107
LG G FG V G G +VA+K L K S + + E++ + H H++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKII 167
+ S +V E+V L ++ GR +D ++ G+ Y H ++
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRH---MVV 138
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT--E 225
HRD+K N+LLD AK+ADFGL+ + SD G+ Y APE SG+L
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRXSCGSPNYAAPE-VISGRLYAGP 195
Query: 226 KSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT 276
+ D++S GV+L L+ G P D H P L + I DG F T
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDDHV-----------PTLFKKICDGIFYT 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 51 LLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSL 105
+G+G FG VH+G+ + + VAIK K + RE F E + + H H+V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+G T ++ E L L + + ++D + + A + LAYL +
Sbjct: 77 IGVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
+HRDI A N+L+ K+ DFGL++ D +++ ++APE + + T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 226 KSDVFSFGVMLLELIT-GRRP 245
SDV+ FGV + E++ G +P
Sbjct: 192 ASDVWMFGVCMWEILMHGVKP 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 28/214 (13%)
Query: 52 LGQGGFG-YVHRGVLPNGKE-----VAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V GKE VA+K LK+ + E+E +E++I+S + H+++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR--------------LKIAL 149
+L+G T G +++ E+ L L K P +++ L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 150 GSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
A+G+A+L ++C IHRD+ A N+LL AK+ DFGLA+ I +D N V
Sbjct: 174 QVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+S+G++L E+ +
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 186
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G S L+ + +P L E + + ++W ++ AKG
Sbjct: 71 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 123
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 179
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTR---LKIA 148
+L+G T G M++ EF L +L K + D+LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHHKHLV 103
F+ +G+G FG V +G+ K VAIK + + + Q E+ ++S+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
G Y ++ ++ E++ + L T L+ L KGL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 123
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K IHRDIKAAN+LL E K+ADFG+A +D + V GT ++APE
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAY 181
Query: 224 TEKSDVFSFGVMLLELITGRRPVDSTH 250
K+D++S G+ +EL G P H
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTRLKIALGS 151
+L+G T G M++ EF L +L K + D+LT + S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 152 ---AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 123
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 181
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 182 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 234
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 46 FSDANLLGQGGFGYVHR-GVLPNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHHKH 101
F LG G FG VH NG+ A+K LK ++ + E ++S V H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
++ + G + Q ++ +++ L F L K + + + + A L YLH
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSK 125
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
II+RD+K NILLD K+ DFG AK D V+ + GT Y+APE S+
Sbjct: 126 ---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTK 178
Query: 222 KLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
+ D +SFG+++ E++ G P ++T
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G S L+ + +P L E + + ++W ++ AKG
Sbjct: 77 PHVCRLLGI-CLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-------DWLTR---LKIALGSA 152
+L+G T G M++ EF L +L K + D+LT + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFG 211
KG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTR---LKIA 148
+L+G T G M++ EF L +L K + D+LT + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 80
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 138
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 139 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 191
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDS 248
E + +SD++S G+ L+E+ GR P+ S
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+GQG G V+ + + G+EVAI+Q+ + E+ ++ + ++V+ + Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
G + +V E++ +L + MD + + L +LH + ++IHRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 142
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKSD 228
IK+ NILL K+ DFG + + S R ++GT ++APE + K D
Sbjct: 143 IKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 229 VFSFGVMLLELITGRRP 245
++S G+M +E+I G P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+GQG G V+ + + G+EVAI+Q+ + E+ ++ + ++V+ + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
G + +V E++ +L + MD + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKSD 228
IK+ NILL K+ DFG + + S R ++GT ++APE + K D
Sbjct: 142 IKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 229 VFSFGVMLLELITGRRP 245
++S G+M +E+I G P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+GQG G V+ + + G+EVAI+Q+ + E+ ++ + ++V+ + Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
G + +V E++ +L + MD + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKSD 228
IK+ NILL K+ DFG + + S R ++GT ++APE + K D
Sbjct: 142 IKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 229 VFSFGVMLLELITGRRP 245
++S G+M +E+I G P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+GQG G V+ + + G+EVAI+Q+ + E+ ++ + ++V+ + Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
G + +V E++ +L + MD + + L +LH + ++IHR+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRN 142
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVF 230
IK+ NILL K+ DFG + + ST V GT ++APE + K D++
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIW 201
Query: 231 SFGVMLLELITGRRP 245
S G+M +E+I G P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTR---LKIA 148
+L+G T G M++ EF L +L K + D+LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 52 LGQGGFGYVHR----GV--LPNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 SLVGYYT-AGSQRMLVYEFVPNNTLEFHLHGKGRPTM-----------DWLTRLKIALGS 151
+L+G T G M++ EF L +L K + D+LT + S
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 152 ---AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 207
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 119
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 120 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G FG V++ G A K ++ S + ++ E+EI++ H ++V L+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 111 AGSQRMLVYEFVPNNTLEFHL----HGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
+ ++ EF P ++ + G P + + R + + L +LH +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 138
Query: 167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGKLTE 225
IHRD+KA N+L+ + + ++ADFG++ A ++ T +GT ++APE + +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 226 -----KSDVFSFGVMLLELITGRRP 245
K+D++S G+ L+E+ P
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 52 LGQGGFG-YVHRGVLPNGKE-----VAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V GKE VA+K LK+ + E+E +E++I+S + H+++V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR------------PTMDWLTRLKIALGS 151
+L+G T G +++ E+ L L K R T L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 152 AKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGT 209
A+G+A+L ++C IHRD+ A N+LL AK+ DFGLA+ I +D N V
Sbjct: 174 AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+S+G++L E+ +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 119
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 120 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 88
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 146
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 147 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 199
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 119
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 120 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 119
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 120 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 46/231 (19%)
Query: 52 LGQGGFGYVHR----GVLPNGK--EVAIKQLKA-GSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G FG V + G+LP VA+K LK S + +FQ E +++ + ++V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 105 LVGYYTAGSQRMLVYEFVPNNTL-EF---------------------HLHGKGRPTMDWL 142
L+G G L++E++ L EF + G P +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 143 TRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-------IA 195
+L IA A G+AYL E K +HRD+ N L+ K+ADFGL++
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
+D N + R ++ PE + T +SDV+++GV+L E+ + G +P
Sbjct: 232 ADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V + G++ K + ++ A Q RE Q ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L GR L ++ IA+ KGL Y
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTY 119
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H KI+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y++P
Sbjct: 120 LREK-H-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+E+ GR P+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G FG V++ G A K ++ S + ++ E+EI++ H ++V L+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 111 AGSQRMLVYEFVPNNTLEFHL----HGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
+ ++ EF P ++ + G P + + R + + L +LH +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 130
Query: 167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGKLTE 225
IHRD+KA N+L+ + + ++ADFG++ A ++ T +GT ++APE + +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 226 -----KSDVFSFGVMLLELITGRRP 245
K+D++S G+ L+E+ P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 23/212 (10%)
Query: 49 ANLLGQGGFGYVHRGV-LPNGKEV----AIKQLKAG-SGQGEREFQAEVEIISRVHHKHL 102
+LG G FG V++G+ +P+G+ V AIK L+ S + +E E +++ V ++
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHL-HGKGR----PTMDWLTRLKIALGSAKGLAY 157
L+G + + LV + +P L H+ +GR ++W ++ AKG++Y
Sbjct: 82 SRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS-DVNTHVSTRVMGTFGYLAPE 216
L ED +++HRD+ A N+L+ K+ DFGLA++ D + + ++A E
Sbjct: 135 L-EDV--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 217 YASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+ T +SDV+S+GV + EL+T G +P D
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 44 DGFSDANLLGQGGFGYV----HR--GVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV 97
D F + LG G G V HR G++ K + ++ A Q RE Q ++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHEC 71
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+ ++V G + + + + E + +L+ L R + L ++ IA+ +GLAY
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV--LRGLAY 129
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
L E H +I+HRD+K +NIL++ + E K+ DFG++ I S N+ V TR Y+AP
Sbjct: 130 LREK-H-QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMAP 182
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
E + +SD++S G+ L+EL GR P+
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ A+G
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEG 126
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 182
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 14/210 (6%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQA-EVEIISRVHH 99
++ F LG G + V++G+ G VA+K++K S +G E+ ++ + H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK---GRPTMDWLTRLK-IALGSAKGL 155
+++V L ++ LV+EF+ +N L+ ++ + P L +K +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTFGYLA 214
A+ HE+ KI+HRD+K N+L++ + + K+ DFGLA+ VNT S V T Y A
Sbjct: 122 AFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRA 176
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
P+ + S D++S G +L E+ITG+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +L G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 192
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 26/222 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLV 103
F L+G G +G V++G + G+ AIK + +G E E + E+ ++ + HH+++
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 104 SLVGYYTAGS------QRMLVYEFVPNNTLEFHLHGKGRPTM--DWLTRLKIALGSAKGL 155
+ G + + Q LV EF ++ + T+ +W+ I +GL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGL 142
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYL 213
++LH+ K+IHRDIK N+LL E K+ DFG +++ ++ V R +GT ++
Sbjct: 143 SHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG---VSAQLDRTVGRRNTFIGTPYWM 196
Query: 214 APEYASSGKLTE-----KSDVFSFGVMLLELITGRRPVDSTH 250
APE + + + KSD++S G+ +E+ G P+ H
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFG AK+ A + H + +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 187
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AI +L+ A S + +E E +++ V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 163
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 219
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGER-EFQAEVEIISRVHHKH 101
D + ++G G V P ++VAIK++ Q E E++ +S+ HH +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 102 LVSLVGYYTAGSQRMLVYEFVPN-NTLEF--HLHGKGR---PTMDWLTRLKIALGSAKGL 155
+VS + + LV + + + L+ H+ KG +D T I +GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS---DVNTH-VSTRVMGTFG 211
YLH++ IHRD+KA NILL ++ADFG++ + D+ + V +GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 212 YLAPEYASSGKLTE-KSDVFSFGVMLLELITGRRP 245
++APE + + K+D++SFG+ +EL TG P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +L G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFG AK+ A + H + +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 187
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +L G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFGLAK+ A + H + +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 192
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G S L+ + +P L E + + ++W ++ AKG
Sbjct: 81 PHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFG AK+ A + H + +
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 189
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFG AK+ A + H + +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 187
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 43 TDGFSDANLLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQGE---REFQAEVEIIS 95
D F LG+G FG V+ L K+ VA+K L + E + + E+EI +
Sbjct: 22 IDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGL 155
+HH +++ L Y+ + L+ E+ P L L T D I A L
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADAL 136
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y H K+IHRDIK N+LL K E K+ADFG + A + + GT YL P
Sbjct: 137 MYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT---MCGTLDYLPP 190
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
E EK D++ GV+ EL+ G P +S
Sbjct: 191 EMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFG AK+ A + H + +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 185
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 51 LLGQGGFGYVHR----GVLPNGK--EVAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHL 102
+LG G FG V G+ G +VA+K LK + ERE +E+++++++ H+++
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRP---------------------TMDW 141
V+L+G T L++E+ L +L K + +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNT 200
L A AKG+ +L +HRD+ A N+L+ K+ DFGLA+ I SD N
Sbjct: 172 EDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
V ++APE G T KSDV+S+G++L E+ +
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V V +GK VA+K++ Q EV I+ H+++V + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+ LH +IHR
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHR 271
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E++ G P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 25/216 (11%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEV----AIKQLK-AGSGQGEREFQAEVEIISRVHH 99
F +LG G FG V++G+ +P G++V AIK+L+ A S + +E E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMDWLTRLKIALGSAKG 154
H+ L+G + + L+ + +P L E + + ++W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI--ASDVNTHVSTRVMGTFGY 212
+ YL + +++HRD+ A N+L+ K+ DFG AK+ A + H + +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 192
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD 247
+A E T +SDV+S+GV + EL+T G +P D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGER-EFQAEVEIISRVHHKH 101
D + ++G G V P ++VAIK++ Q E E++ +S+ HH +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 102 LVSLVGYYTAGSQRMLVYEFVPN-NTLEF--HLHGKGR---PTMDWLTRLKIALGSAKGL 155
+VS + + LV + + + L+ H+ KG +D T I +GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS---DVNTH-VSTRVMGTFG 211
YLH++ IHRD+KA NILL ++ADFG++ + D+ + V +GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 212 YLAPEYASSGKLTE-KSDVFSFGVMLLELITGRRP 245
++APE + + K+D++SFG+ +EL TG P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R + + A+G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK-- 134
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 36 YEELARATDGFSDANLLGQ-GGFGYVHRGVLPNGKEVAI----KQLKAGSGQGEREFQAE 90
YE + R + ++G+ G FG V++ KE ++ K + S + ++ E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVE 57
Query: 91 VEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
++I++ H ++V L+ + + ++ EF ++ + RP LT +I +
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVV 113
Query: 151 SAK---GLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-- 205
+ L YLH++ KIIHRD+KA NIL + K+ADFG++ A + T + R
Sbjct: 114 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTXIQRRDS 168
Query: 206 VMGTFGYLAPEYASSGKLTE-----KSDVFSFGVMLLELITGRRP 245
+GT ++APE + K+DV+S G+ L+E+ P
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAI----KQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVG 107
LG G FG V++ KE ++ K + S + ++ E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAK---GLAYLHEDCHP 164
+ + ++ EF ++ + RP LT +I + + L YLH++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR---VMGTFGYLAPEYASSG 221
KIIHRD+KA NIL + K+ADFG+ S NT R +GT ++APE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 222 KLTE-----KSDVFSFGVMLLELITGRRP 245
+ K+DV+S G+ L+E+ P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R + + A+G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK-- 140
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R + + A+G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESK-- 140
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 28/213 (13%)
Query: 50 NLLGQGGFGYVHRGVLPNG---KEVAIKQLKA-GSGQGEREFQAEVEIISRV-HHKHLVS 104
+++G+G FG V + + + AIK++K S R+F E+E++ ++ HH ++++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 105 LVGYYTAGSQRMLVYEFVPNNTL--------------EFHLHGKGRPTMDWLTRLKIALG 150
L+G L E+ P+ L F + T+ L A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
A+G+ YL + + IHRD+ A NIL+ + AK+ADFGL++ +V + MG
Sbjct: 141 VARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-GQEVYV---KKTMGRL 193
Query: 211 G--YLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++A E + T SDV+S+GV+L E+++
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 52 LGQGGFG-YVHRGVLPNGKE-----VAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V GKE VA+K LK+ + E+E +E++I+S + H+++V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK----------------------GRPTMDW 141
+L+G T G +++ E+ L L K GRP ++
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP-LEL 157
Query: 142 LTRLKIALGSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVN 199
L + A+G+A+L ++C IHRD+ A N+LL AK+ DFGLA+ I +D N
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
V ++APE T +SDV+S+G++L E+ +
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIK----QLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG+G FG V ++VA+K QL S R + E+ + + H H++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
T + ++V E+ ++ + K R T D R + A + Y H KI
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICA--IEYCHRH---KI 129
Query: 167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT-- 224
+HRD+K N+LLD K+ADFGL+ I +D N ++ G+ Y APE +GKL
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VINGKLYAG 186
Query: 225 EKSDVFSFGVMLLELITGRRPVD 247
+ DV+S G++L ++ GR P D
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAI----KQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVG 107
LG G FG V++ KE ++ K + S + ++ E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAK---GLAYLHEDCHP 164
+ + ++ EF ++ + RP LT +I + + L YLH++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR---VMGTFGYLAPEYASSG 221
KIIHRD+KA NIL + K+ADFG+ S NT R +GT ++APE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 222 KLTE-----KSDVFSFGVMLLELITGRRP 245
+ K+DV+S G+ L+E+ P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 28/213 (13%)
Query: 50 NLLGQGGFGYVHRGVLPNG---KEVAIKQLKA-GSGQGEREFQAEVEIISRV-HHKHLVS 104
+++G+G FG V + + + AIK++K S R+F E+E++ ++ HH ++++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 105 LVGYYTAGSQRMLVYEFVPNNTL--------------EFHLHGKGRPTMDWLTRLKIALG 150
L+G L E+ P+ L F + T+ L A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
A+G+ YL + + IHRD+ A NIL+ + AK+ADFGL++ +V + MG
Sbjct: 151 VARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-GQEVYVK---KTMGRL 203
Query: 211 G--YLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++A E + T SDV+S+GV+L E+++
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V V +GK VA+K++ Q EV I+ H+++V + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+ LH +IHR
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHR 194
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E++ G P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAI----KQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVG 107
LG G FG V++ KE ++ K + S + ++ E++I++ H ++V L+
Sbjct: 45 LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAK---GLAYLHEDCHP 164
+ + ++ EF ++ + RP LT +I + + L YLH++
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR---VMGTFGYLAPEYASSG 221
KIIHRD+KA NIL + K+ADFG+ S NT R +GT ++APE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 222 KLTE-----KSDVFSFGVMLLELITGRRP 245
+ K+DV+S G+ L+E+ P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V V +GK VA+K++ Q EV I+ H+++V + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+ LH +IHR
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHR 151
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E++ G P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R A+ A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESK-- 130
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R A+ A+G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESK-- 134
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R A+ A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESK-- 130
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V V +GK VA+K++ Q EV I+ H+++V + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+ LH +IHR
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHR 149
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E++ G P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 52 LGQGGFGYVHRGVL--PNGK--EVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVS 104
LG G FG V RG P+GK VA+K LK + +F EV + + H++L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
L G +M V E P +L L +G + L+R A+ A+G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESK-- 130
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASSG 221
+ IHRD+ A N+LL + K+ DFGL + + H + F + APE +
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 222 KLTEKSDVFSFGVMLLELIT-GRRP 245
+ SD + FGV L E+ T G+ P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V V +GK VA+K++ Q EV I+ H+++V + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+ LH +IHR
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHR 140
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E++ G P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G G V V +GK VA+K++ Q EV I+ H+++V + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 111 AGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
G + +V EF+ L + H + M+ + L + L+ LH +IHR
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ---GVIHR 144
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR--VMGTFGYLAPEYASSGKLTEKS 227
DIK+ +ILL K++DFG + V+ V R ++GT ++APE S +
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 228 DVFSFGVMLLELITGRRP 245
D++S G+M++E++ G P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHHKHLVSLVGYY 109
+G+G +G V++ G+ VA+K+++ + A E+ ++ +HH ++VSL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIH 168
+ LV+EF+ + L+ L D +++KI L +G+A+ H+ +I+H
Sbjct: 89 HSERCLTLVFEFMEKD-LKKVLDENKTGLQD--SQIKIYLYQLLRGVAHCHQH---RILH 142
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKLTEKS 227
RD+K N+L++ K+ADFGLA+ A + T + T Y AP+ S K +
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 228 DVFSFGVMLLELITGR 243
D++S G + E+ITG+
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVL--PNGKEVAIKQLKAG----SGQGEREFQAEVEIIS 95
+ F +LG+GG+G V R V GK A+K LK + + +AE I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----WLTRLKIALGS 151
V H +V L+ + G + L+ E++ L L +G D +L + +ALG
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG- 135
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+LH+ II+RD+K NI+L+ + K+ DFGL K + T V+ GT
Sbjct: 136 -----HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIE 186
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
Y+APE D +S G ++ +++TG P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 67 NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT 126
+G++VA+K + Q EV I+ H ++V + Y G + ++ EF+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 127 LEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKV 186
L + + R + + + + LAYLH +IHRDIK+ +ILL K+
Sbjct: 129 LT-DIVSQVRLNEEQIA--TVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKL 182
Query: 187 ADFGL-AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
+DFG A+I+ DV ++GT ++APE S + D++S G+M++E++ G P
Sbjct: 183 SDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHHKHLVSLVGYY 109
+G+G +G V++ G+ VA+K+++ + A E+ ++ +HH ++VSL+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIH 168
+ LV+EF+ + L+ L D +++KI L +G+A+ H+ +I+H
Sbjct: 89 HSERCLTLVFEFMEKD-LKKVLDENKTGLQD--SQIKIYLYQLLRGVAHCHQH---RILH 142
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKLTEKS 227
RD+K N+L++ K+ADFGLA+ A + T + T Y AP+ S K +
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 228 DVFSFGVMLLELITGR 243
D++S G + E+ITG+
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVL--PNGKEVAIKQLKAG----SGQGEREFQAEVEIIS 95
+ F +LG+GG+G V R V GK A+K LK + + +AE I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----WLTRLKIALGS 151
V H +V L+ + G + L+ E++ L L +G D +L + +ALG
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG- 135
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+LH+ II+RD+K NI+L+ + K+ DFGL K + T V+ GT
Sbjct: 136 -----HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIE 186
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
Y+APE D +S G ++ +++TG P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 43 TDGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQA---EVEIISRV- 97
D F +LG+G FG V V G A+K LK + + + E I+S
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+H L L + + V EFV L FH+ R D A L +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMF 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTFGYLAP 215
LH+ II+RD+K N+LLD + K+ADFG+ K I + V T GT Y+AP
Sbjct: 140 LHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT---ATFCGTPDYIAP 193
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
E D ++ GV+L E++ G P ++ + ED L +
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN---EDDLFE 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 28/213 (13%)
Query: 50 NLLGQGGFGYVHRGVLPNG---KEVAIKQLKA-GSGQGEREFQAEVEIISRV-HHKHLVS 104
+++G+G FG V + + + AIK++K S R+F E+E++ ++ HH ++++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 105 LVGYYTAGSQRMLVYEFVPNNTL--------------EFHLHGKGRPTMDWLTRLKIALG 150
L+G L E+ P+ L F + T+ L A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
A+G+ YL + + IHR++ A NIL+ + AK+ADFGL++ +V + MG
Sbjct: 148 VARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR-GQEVYVK---KTMGRL 200
Query: 211 G--YLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++A E + T SDV+S+GV+L E+++
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 55/257 (21%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH------LVS 104
+G+G +G V RG L +G+ VA+K S + E+ + E EI + V +H + S
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 105 LVGYYTAGSQRMLV---------YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGL 155
+ + +Q L+ Y+F+ TLE HL L++A+ +A GL
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL------------ALRLAVSAACGL 118
Query: 156 AYLHEDC-----HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV----STRV 206
A+LH + P I HRD K+ N+L+ + +AD GLA + S + ++ + RV
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 207 MGTFGYLAPEYASSGKLTEK------SDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDW 260
GT Y+APE T+ +D+++FG++L E+ RR T V + D+
Sbjct: 179 -GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARR------TIVNGIVEDY 229
Query: 261 ARPLLNRAIEDGNFDTL 277
P + D +F+ +
Sbjct: 230 RPPFYDVVPNDPSFEDM 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 138 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V G++VA+K L QG E E+ + + H H++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+ + ++V E+ N ++ + R M + + Y H K
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---K 133
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
I+HRD+K N+LLD K+ADFGL+ I +D N ++ G+ Y APE SGKL
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 190
Query: 226 --KSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
+ DV+S GV+L ++ R P D D + P+L + I +G +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD-----------DESIPVLFKNISNGVY 230
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V G++VA+K L QG E E+ + + H H++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+ + ++V E+ N ++ + R M + + Y H K
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---K 132
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT- 224
I+HRD+K N+LLD K+ADFGL+ I +D N ++ G+ Y APE SGKL
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 189
Query: 225 -EKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
+ DV+S GV+L ++ R P D D + P+L + I +G +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD-----------DESIPVLFKNISNGVY 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST 204
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + T
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 205 ---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
R+ ++APE T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V G++VA+K L QG E E+ + + H H++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+ + ++V E+ N ++ + R M + + Y H K
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---K 123
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT- 224
I+HRD+K N+LLD K+ADFGL+ I +D N ++ G+ Y APE SGKL
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 180
Query: 225 -EKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
+ DV+S GV+L ++ R P D D + P+L + I +G +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD-----------DESIPVLFKNISNGVY 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 144
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 145 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 146
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 146
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 52 LGQGGFGYVHRGVL-PNGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHH-KHLVSLVGY 108
+G G G V + G +A+KQ++ +G+ + + +++++ + H ++V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 109 YTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
+ + + E + + +G L ++ +A+ K L YL E +IH
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAI--VKALYYLKE--KHGVIH 148
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE--- 225
RD+K +NILLD + + K+ DFG++ V+ R G Y+APE T+
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGIS--GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 226 --KSDVFSFGVMLLELITGRRPVDSTHTFVE 254
++DV+S G+ L+EL TG+ P + T E
Sbjct: 207 DIRADVWSLGISLVELATGQFPYKNCKTDFE 237
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 30/231 (12%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+G FG V G++VA+K L QG E E+ + + H H++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+ + ++V E+ N ++ + R M + + Y H K
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---K 127
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT- 224
I+HRD+K N+LLD K+ADFGL+ I +D N ++ G+ Y APE SGKL
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 184
Query: 225 -EKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
+ DV+S GV+L ++ R P D D + P+L + I +G +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD-----------DESIPVLFKNISNGVY 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 29/234 (12%)
Query: 31 KSTFTYEELARATDGFSDANLL-------GQGGFGYVHRGVLP-----NGKEVAIKQLKA 78
+S F E R + + D LL G G FG V +G V I + +A
Sbjct: 349 ESPFADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA 408
Query: 79 GSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVP----NNTLEFHLHGK 134
+ E AE ++ ++ + ++V ++G A S MLV E N L+ + H K
Sbjct: 409 NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK 467
Query: 135 GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI 194
+ ++ + ++ + G+ YL E +HRD+ A N+LL + AK++DFGL+K
Sbjct: 468 DKNIIELVHQVSM------GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 518
Query: 195 ASDVNTHVSTRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
+ + G + + APE + K + KSDV+SFGV++ E + G++P
Sbjct: 519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 25/229 (10%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQL---KAGSGQGEREFQAEVEIISRVHHKHLVSLVG 107
LG G FG V G G +VA+K L K S + + E++ + H H++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKII 167
+ + +V E+V L ++ GR RL + SA + H ++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-----MVV 133
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT--E 225
HRD+K N+LLD AK+ADFGL+ + SD + T G+ Y APE SG+L
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRTSC-GSPNYAAPE-VISGRLYAGP 190
Query: 226 KSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF 274
+ D++S GV+L L+ G P D H P L + I G F
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHV-----------PTLFKKIRGGVF 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 136
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 137 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYY 109
+G GGF V + G+ VAIK + + G + E+E + + H+H+ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
++ +V E+ P L ++ + R + + TR+ + +AY+H + HR
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRV-VFRQIVSAVAYVHSQGYA---HR 132
Query: 170 DIKAANILLDFKFEAKVADFGL-AKIASDVNTHVSTRVMGTFGYLAPEYAS-SGKLTEKS 227
D+K N+L D + K+ DFGL AK + + H+ T G+ Y APE L ++
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEA 191
Query: 228 DVFSFGVMLLELITGRRPVD 247
DV+S G++L L+ G P D
Sbjct: 192 DVWSMGILLYVLMCGFLPFD 211
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 124
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 125 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 130
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTH-VSTRVMGTFGYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + +D N + T + APE +
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+GGF + KEV K L Q E+ E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDC 162
G++ +V E +L E H K P + R +I LG YLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN- 136
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
++IHRD+K N+ L+ E K+ DFGLA + + + GT Y+APE S
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDST 249
+ + DV+S G ++ L+ G+ P +++
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+GGF + KEV K L Q E+ E+ I + H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDC 162
G++ +V E +L E H K P + R +I LG YLH +
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN- 140
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
++IHRD+K N+ L+ E K+ DFGLA + + + GT Y+APE S
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDST 249
+ + DV+S G ++ L+ G+ P +++
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ +T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKNTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+GGF + KEV K L Q E+ E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDC 162
G++ +V E +L E H K P + R +I LG YLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN- 136
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
++IHRD+K N+ L+ E K+ DFGLA + + + GT Y+APE S
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDST 249
+ + DV+S G ++ L+ G+ P +++
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 126
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 130
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRLK---- 146
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 147 -------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 258 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 52 LGQGGFGYVHR----GVLPN--GKEVAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V G++ + VA+K LK + ERE +E++++S + +H ++V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 104 SLVGYYTAGSQRMLVYEFVP-NNTLEF-------HLHGKGRPTM--------DWLTRLKI 147
+L+G T G +++ E+ + L F + K P + D L
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 148 ALGSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTR 205
+ AKG+A+L ++C IHRD+ A NILL K+ DFGLA+ I +D N V
Sbjct: 167 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDS 248
++APE + T +SDV+S+G+ L EL + PVDS
Sbjct: 223 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 52 LGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLV 106
LG G FG V +G V I + +A + E AE ++ ++ + ++V ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 107 GYYTAGSQRMLVYEFVP----NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
G A S MLV E N L+ + H K + ++ + ++ + G+ YL E
Sbjct: 438 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLEES- 489
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF--GYLAPEYASS 220
+HRD+ A N+LL + AK++DFGL+K + + G + + APE +
Sbjct: 490 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 221 GKLTEKSDVFSFGVMLLELIT-GRRP 245
K + KSDV+SFGV++ E + G++P
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 142 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+++ ++G G FG V + L EVAIK++ Q +R E++I+ V H ++V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL----QDKRFKNRELQIMRIVKHPNVVD 96
Query: 105 LVG-YYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAY 157
L +Y+ G ++ LV E+VP H K + TM L + LAY
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+H I HRDIK N+LLD K+ DFG AKI +VS + + Y APE
Sbjct: 157 IHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPE 211
Query: 217 YA-SSGKLTEKSDVFSFGVMLLELITGR 243
+ T D++S G ++ EL+ G+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 30/216 (13%)
Query: 52 LGQGGFGYVHR----GVLPN--GKEVAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V G++ + VA+K LK + ERE +E++++S + +H ++V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 104 SLVGYYTAGSQRMLVYEFVP-NNTLEF-------HLHGKGRPTM--------DWLTRLKI 147
+L+G T G +++ E+ + L F + K P + D L
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 148 ALGSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTR 205
+ AKG+A+L ++C IHRD+ A NILL K+ DFGLA+ I +D N V
Sbjct: 151 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE + T +SDV+S+G+ L EL +
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 50 NLLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQG-EREFQAEVEIISRVHHKHLVS 104
++LG G F V +L K VAIK + + +G E + E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L Y +G L+ + V L + KG T +RL + A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 165 KIIHRDIKAANIL---LDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
I+HRD+K N+L LD + ++DFGL+K+ D + +ST GT GY+APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQK 193
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
++ D +S GV+ L+ G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 146 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQL---KAGSGQGEREFQAEVEIISRVHHKHLVSLVG 107
LG G FG V G G +VA+K L K S + + E++ + H H++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKII 167
+ + +V E+V L ++ GR RL + SA + H ++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-----MVV 133
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT--E 225
HRD+K N+LLD AK+ADFGL+ + SD + G+ Y APE SG+L
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPE-VISGRLYAGP 190
Query: 226 KSDVFSFGVMLLELITGRRPVDSTHT 251
+ D++S GV+L L+ G P D H
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+GGF + KEV K L Q E+ E+ I + H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDC 162
G++ +V E +L E H K P + R +I LG YLH +
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN- 158
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
++IHRD+K N+ L+ E K+ DFGLA + + + GT Y+APE S
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDST 249
+ + DV+S G ++ L+ G+ P +++
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 52 LGQGGFGYVHR----GVLPN--GKEVAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V G++ + VA+K LK + ERE +E++++S + +H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 104 SLVGYYTAGSQRMLVYEFVP-NNTLEF-------HLHGKGRPTM--------DWLTRLKI 147
+L+G T G +++ E+ + L F + K P + D L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 148 ALGSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTR 205
+ AKG+A+L ++C IHRD+ A NILL K+ DFGLA+ I +D N V
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDS 248
++APE + T +SDV+S+G+ L EL + PVDS
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 52 LGQGGFGYVHR----GVLPN--GKEVAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V G++ + VA+K LK + ERE +E++++S + +H ++V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 104 SLVGYYTAGSQRMLVYEFVP-NNTLEF-------HLHGKGRPTM--------DWLTRLKI 147
+L+G T G +++ E+ + L F + K P + D L
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 148 ALGSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTR 205
+ AKG+A+L ++C IHRD+ A NILL K+ DFGLA+ I +D N V
Sbjct: 169 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDS 248
++APE + T +SDV+S+G+ L EL + PVDS
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 42/222 (18%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW--------------LTR 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST 204
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ D++ H+
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR---DIH-HIDX 205
Query: 205 RVMGTFG-----YLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T G ++APE T +SDV+SFGV+L E+ T
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+GGF + KEV K L Q E+ E+ I + H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDC 162
G++ +V E +L E H K P + R +I LG YLH +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN- 160
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
++IHRD+K N+ L+ E K+ DFGLA + + + GT Y+APE S
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDST 249
+ + DV+S G ++ L+ G+ P +++
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 145 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 52 LGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVSLVGYY 109
+G+G FG V G L + VA+K + + +F E I+ + H ++V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
T +V E V L +G + T L++ +A G+ YL C IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT-FGYLAPEYASSGKLTEKSD 228
D+ A N L+ K K++DFG+++ +D S + + APE + G+ + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 229 VFSFGVMLLE 238
V+SFG++L E
Sbjct: 298 VWSFGILLWE 307
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 199 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG+GGF + KEV K L Q E+ E+ I + H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDC 162
G++ +V E +L E H K P + R +I LG YLH +
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----YLHRN- 134
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
++IHRD+K N+ L+ E K+ DFGLA + + + GT Y+APE S
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDST 249
+ + DV+S G ++ L+ G+ P +++
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 52 LGQGGFGYVHR----GVLPN--GKEVAIKQLKAGSGQGERE-FQAEVEIISRV-HHKHLV 103
LG G FG V G++ + VA+K LK + ERE +E++++S + +H ++V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 104 SLVGYYTAGSQRMLVYEFVP-NNTLEF-------HLHGKGRPTM--------DWLTRLKI 147
+L+G T G +++ E+ + L F + K P + D L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 148 ALGSAKGLAYL-HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTR 205
+ AKG+A+L ++C IHRD+ A NILL K+ DFGLA+ I +D N V
Sbjct: 174 SYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDS 248
++APE + T +SDV+S+G+ L EL + PVDS
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 204 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHH 99
D F D +LG+GGFG V + GK A K+L + + +Q E +I+++VH
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAY 157
+ +VSL + + LV + + +H++ + P + GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LH+ II+RD+K N+LLD +++D GLA + + GT G++APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED 255
+ D F+ GV L E+I R P + VE+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN 398
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 28/223 (12%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 -THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+T ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 201 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHH 99
D F D +LG+GGFG V + GK A K+L + + +Q E +I+++VH
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAY 157
+ +VSL + + LV + + +H++ + P + GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LH+ II+RD+K N+LLD +++D GLA + + GT G++APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED 255
+ D F+ GV L E+I R P + VE+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN 398
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHH 99
D F D +LG+GGFG V + GK A K+L + + +Q E +I+++VH
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAY 157
+ +VSL + + LV + + +H++ + P + GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LH+ II+RD+K N+LLD +++D GLA + + GT G++APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED 255
+ D F+ GV L E+I R P + VE+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN 398
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 50 NLLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQG-EREFQAEVEIISRVHHKHLVS 104
++LG G F V +L K VAIK + + +G E + E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L Y +G L+ + V L + KG T +RL + A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 165 KIIHRDIKAANIL---LDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
I+HRD+K N+L LD + ++DFGL+K+ D + +ST GT GY+APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQK 193
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
++ D +S GV+ L+ G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 52 LGQGGFGYVHRGVL----------PNG-KEVAIKQLKAGSGQGE-REFQAEVEIISRV-H 98
LG+G FG V VL PN +VA+K LK+ + + + + +E+E++ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-------------- 144
HK++++L+G T ++ E+ L +L + P +++
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH-VS 203
+ A A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++ + +
Sbjct: 194 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
T ++APE T +SDV+SFGV+L E+ T
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGKEV----AIKQLKAGSGQGEREFQAEVE--IISRVHH 99
F +LGQG FG V +G + A+K LK + + + ++E I+ V+H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----WLTRLKIALGSAKGL 155
+V L + + L+ +F+ L L + T + +L L +AL L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
II+RD+K NILLD + K+ DFGL+K + D + + GT Y+AP
Sbjct: 146 G---------IIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAP 195
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRP 245
E + T+ +D +SFGV++ E++TG P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 50 NLLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQG-EREFQAEVEIISRVHHKHLVS 104
++LG G F V +L K VAIK + + +G E + E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L Y +G L+ + V L + KG T +RL + A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 165 KIIHRDIKAANIL---LDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
I+HRD+K N+L LD + ++DFGL+K+ D + +ST GT GY+APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQK 193
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
++ D +S GV+ L+ G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 50 NLLGQGGFGYVHRGVLPNGKE----VAIKQLKAGSGQG-EREFQAEVEIISRVHHKHLVS 104
++LG G F V +L K VAIK + + +G E + E+ ++ ++ H ++V+
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L Y +G L+ + V L + KG T +RL + A + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD---L 135
Query: 165 KIIHRDIKAANIL---LDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
I+HRD+K N+L LD + ++DFGL+K+ D + +ST GT GY+APE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQK 193
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
++ D +S GV+ L+ G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHH 99
D F D +LG+GGFG V + GK A K+L + + +Q E +I+++VH
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAY 157
+ +VSL + + LV + + +H++ + P + GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LH+ II+RD+K N+LLD +++D GLA + + GT G++APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAPEL 360
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED 255
+ D F+ GV L E+I R P + VE+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN 398
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 52 LGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGER-EFQAEVEIISRVHHKHLVSLVGYY 109
+G+G FG V G L + VA+K + + +F E I+ + H ++V L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR 169
T +V E V L +G + T L++ +A G+ YL C IHR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 170 DIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT-FGYLAPEYASSGKLTEKSD 228
D+ A N L+ K K++DFG+++ +D S + + APE + G+ + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 229 VFSFGVMLLE 238
V+SFG++L E
Sbjct: 298 VWSFGILLWE 307
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 46 FSDANLLGQGGFG---YVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVE--IISRVHH 99
F +LGQG FG V + P+ G A+K LK + + + ++E I++ V+H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGS-AKGLAYL 158
+V L + + L+ +F+ L L + M +K L A GL +L
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDHL 146
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H II+RD+K NILLD + K+ DFGL+K A D + + GT Y+APE
Sbjct: 147 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID-HEKKAYSFCGTVEYMAPEVV 202
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + +D +S+GV++ E++TG P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ E+ L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ ++ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK+++ L+G T ++ E+ L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGKEV----AIKQLKAGSGQGEREFQAEVE--IISRVHH 99
F +LGQG FG V +G + A+K LK + + + ++E I+ V+H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----WLTRLKIALGSAKGL 155
+V L + + L+ +F+ L L + T + +L L +AL L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
II+RD+K NILLD + K+ DFGL+K + D + + GT Y+AP
Sbjct: 146 G---------IIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAP 195
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRP 245
E + T+ +D +SFGV++ E++TG P
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGKEV----AIKQLKAGSGQGEREFQAEVE--IISRVHH 99
F +LGQG FG V +G + A+K LK + + + ++E I+ V+H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD----WLTRLKIALGSAKGL 155
+V L + + L+ +F+ L L + T + +L L +AL L
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
II+RD+K NILLD + K+ DFGL+K + D + + GT Y+AP
Sbjct: 147 G---------IIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEKKAYSFCGTVEYMAP 196
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRP 245
E + T+ +D +SFGV++ E++TG P
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA+K QL + S Q + EV I+ ++H ++V
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVK 77
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 131
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + ++T G+ Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQG 186
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA+K QL + S Q + EV I+ ++H ++V
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVK 77
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 131
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + ++T G+ Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQG 186
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD------------- 140
+ HK++++L+G T ++ E+ L +L + P M+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 141 -WLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+ + A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 -THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+T ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ G RE Q I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ G RE Q I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIIS 95
R + LG+GGF + + KEV K + Q E+ E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHK 97
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSA 152
+ + H+V G++ +V E +L E H K P + R I
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 152
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTFG 211
+G+ YLH + ++IHRD+K N+ L+ + K+ DFGLA KI D + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPN 207
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
Y+APE + + D++S G +L L+ G+ P +++
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIIS 95
R + LG+GGF + + KEV K + Q E+ E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHK 97
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSA 152
+ + H+V G++ +V E +L E H K P + R I
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 152
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTFG 211
+G+ YLH + ++IHRD+K N+ L+ + K+ DFGLA KI D + + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPN 207
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
Y+APE + + D++S G +L L+ G+ P +++
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ G RE Q I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIIS 95
R + LG+GGF + + KEV K + Q E+ E+ I
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHK 81
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSA 152
+ + H+V G++ +V E +L E H K P + R I
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 136
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTFG 211
+G+ YLH + ++IHRD+K N+ L+ + K+ DFGLA KI D + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 191
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
Y+APE + + D++S G +L L+ G+ P +++
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ + L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V RG G+EVA+K S + ER + E EI V +H +++G+ A
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 104
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q LV ++ + +L +L+ R T+ +K+AL +A GLA+LH +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA---KIASDVNTHVSTRVMGTFGYLAPE 216
P I HRD+K+ NIL+ +AD GLA A+D +GT Y+APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 217 YASSG------KLTEKSDVFSFGVMLLEL 239
+ +++D+++ G++ E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA++ QL + S Q + EV I+ ++H ++V
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVK 77
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 131
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + ++T G+ Y APE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQG 186
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGVLPNGKEV-----AIKQLKAGSGQGEREFQAEVEIIS 95
R + LG+GGF + + KEV K + Q E+ E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHK 97
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKG--RPTMDWLTRLKIALGSA 152
+ + H+V G++ +V E +L E H K P + R I
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 152
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTFG 211
+G+ YLH + ++IHRD+K N+ L+ + K+ DFGLA KI D + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 207
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
Y+APE + + D++S G +L L+ G+ P +++
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA+K QL + S Q + EV I+ ++H ++V
Sbjct: 15 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVK 70
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L G W+ K A + + + CH
Sbjct: 71 LFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMKE-KEARAKFRQIVSAVQYCHQ 124
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + ++T G+ Y APE
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC-----GSPPYAAPELFQG 179
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R VL G+EVA+K QL S Q + EV I+ ++H ++V
Sbjct: 23 IGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVK 78
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 132
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + + ++T G+ Y APE
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC-----GSPPYAAPELFQG 187
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V RG G+EVA+K S + ER + E EI V +H +++G+ A
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 71
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q LV ++ + +L +L+ R T+ +K+AL +A GLA+LH +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA---KIASDVNTHVSTRVMGTFGYLAPE 216
P I HRD+K+ NIL+ +AD GLA A+D +GT Y+APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 217 YASSG------KLTEKSDVFSFGVMLLEL 239
+ +++D+++ G++ E+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA++ QL + S Q + EV I+ ++H ++V
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVK 77
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 131
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K I+HRD+KA N+LLD K+ADFG + + N G+ Y APE K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKKY 189
Query: 224 T-EKSDVFSFGVMLLELITGRRPVD 247
+ DV+S GV+L L++G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V RG G+EVA+K S + ER + E EI V +H +++G+ A
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 91
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q LV ++ + +L +L+ R T+ +K+AL +A GLA+LH +
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA---KIASDVNTHVSTRVMGTFGYLAPE 216
P I HRD+K+ NIL+ +AD GLA A+D +GT Y+APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 217 YASSG------KLTEKSDVFSFGVMLLEL 239
+ +++D+++ G++ E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA+K QL + S Q + EV I+ ++H ++V
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVK 77
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 78 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQYCHQ 131
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K I+HRD+KA N+LLD K+ADFG + + N + G Y APE K
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAPELFQGKKY 189
Query: 224 T-EKSDVFSFGVMLLELITGRRPVD 247
+ DV+S GV+L L++G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V RG G+EVA+K S + ER + E EI V +H +++G+ A
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 66
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q LV ++ + +L +L+ R T+ +K+AL +A GLA+LH +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA---KIASDVNTHVSTRVMGTFGYLAPE 216
P I HRD+K+ NIL+ +AD GLA A+D +GT Y+APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 217 YASSG------KLTEKSDVFSFGVMLLEL 239
+ +++D+++ G++ E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 52 LGQGGFGYVHRGVL----PNGKEVAIKQLKAG--SGQGEREFQAEVEIISRVHHKHLVSL 105
+G+G FG + +L +G++ IK++ S + E + EV +++ + H ++V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKG------RPTMDWLTRLKIALGSAKGLAYLH 159
+ +V ++ L ++ + +DW ++ +AL ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVH 142
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
+ KI+HRDIK+ NI L ++ DFG+A++ + ++ +GT YL+PE
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-TVELARACIGTPYYLSPEICE 198
Query: 220 SGKLTEKSDVFSFGVMLLELIT 241
+ KSD+++ G +L EL T
Sbjct: 199 NKPYNNKSDIWALGCVLYELCT 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGE--REFQAEVEIISRVHHKHLVSLVG 107
+LG+G FG V + +E A+K + S + + EVE++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKII 167
S +V E L + + R + R+ + S G+ Y+H+ I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHK---HNIV 143
Query: 168 HRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT 224
HRD+K NILL+ K + K+ DFGL+ NT + R+ GT Y+APE G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRI-GTAYYIAPE-VLRGTYD 200
Query: 225 EKSDVFSFGVMLLELITGRRP 245
EK DV+S GV+L L++G P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQRMLVY-----EFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ +VY ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 44 DGFSDANLLGQGGFGYV--------HRGVLPNGKEVAIKQLKAGSGQGE-REFQAEVEII 94
D + LG+G FG V + VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 95 SRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW---LTRL----- 145
+ HK++++L+G T ++ + L +L + P M++ + R+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 146 ------KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
A+G+ YL K IHRD+ A N+L+ K+ADFGLA+ ++++
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 200 THVST---RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
+ T R+ ++APE T +SDV+SFGV++ E+ T
Sbjct: 212 YYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V RG G+EVA+K S + ER + E EI V +H +++G+ A
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 68
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q LV ++ + +L +L+ R T+ +K+AL +A GLA+LH +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA---KIASDVNTHVSTRVMGTFGYLAPE 216
P I HRD+K+ NIL+ +AD GLA A+D +GT Y+APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 217 YASSG------KLTEKSDVFSFGVMLLEL 239
+ +++D+++ G++ E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G FG V RG G+EVA+K S + ER + E EI V +H +++G+ A
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 65
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q LV ++ + +L +L+ R T+ +K+AL +A GLA+LH +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA---KIASDVNTHVSTRVMGTFGYLAPE 216
P I HRD+K+ NIL+ +AD GLA A+D +GT Y+APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 217 YASSG------KLTEKSDVFSFGVMLLEL 239
+ +++D+++ G++ E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 53 GQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR--VHHKHLVSLVGYYT 110
+G FG V + L N + VA+K Q ++ +Q E E+ S + H++++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 111 AGS----QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC---- 162
G+ L+ F +L L + W IA A+GLAYLHED
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA------KIASDVNTHVSTRVMGTFGYL 213
P I HRDIK+ N+LL A +ADFGLA K A D + V TR Y+
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR-----RYM 200
Query: 214 APEYASSGKLTEKS-----DVFSFGVMLLEL 239
APE ++ D+++ G++L EL
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 52 LGQGGFGYVHRGVLPNGK------EVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVS 104
LG+G FG V + + K VA+K LK + E R+ +E ++ +V+H H++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLH-----GKG--------------RPTMDWLTR- 144
L G + +L+ E+ +L L G G P LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 145 --LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV 202
+ A ++G+ YL E K++HRD+ A NIL+ + K++DFGL++ + +++V
Sbjct: 151 DLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 203 STRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
R G ++A E T +SDV+SFGV+L E++T
Sbjct: 208 K-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Query: 53 GQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR--VHHKHLVSLVGYYT 110
+G FG V + L N VA+K Q ++ +Q+E EI S + H++L+ +
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 111 AGS----QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED---CH 163
GS + L+ F +L +L G + W +A ++GL+YLHED C
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 164 -----PKIIHRDIKAANILLDFKFEAKVADFGLA------KIASDVNTHVSTRVMGTFGY 212
P I HRD K+ N+LL A +ADFGLA K D + V TR Y
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR-----RY 191
Query: 213 LAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPVD 247
+APE ++ D+++ G++L EL++ + D
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 225
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
E + T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 264
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 35/227 (15%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G +G V RG G+ VA+K S + E+ + E E+ + V +H +++G+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIA 69
Query: 111 A-------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC- 162
+ +Q L+ + +L +L T+D ++ L+I L A GLA+LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 163 ----HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST----RVMGTFGYLA 214
P I HRD+K+ NIL+ + +AD GLA + S + RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 215 PEYASSGKLTE------KSDVFSFGVMLLELITGRRPVDSTHTFVED 255
PE + + D+++FG++L E+ RR V ++ VED
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV--SNGIVED 228
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L G+EVAIK QL S Q + EV I+ ++H ++V
Sbjct: 20 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVK 75
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L L+ E+ + +L GR + K A + + + CH
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQYCHQ 129
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + ++T G+ Y APE
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC-----GSPPYAAPELFQG 184
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 35/227 (15%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G +G V RG G+ VA+K S + E+ + E E+ + V +H +++G+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIA 98
Query: 111 A-------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC- 162
+ +Q L+ + +L +L T+D ++ L+I L A GLA+LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 163 ----HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST----RVMGTFGYLA 214
P I HRD+K+ NIL+ + +AD GLA + S + RV GT Y+A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 214
Query: 215 PEYASSGKLTE------KSDVFSFGVMLLELITGRRPVDSTHTFVED 255
PE + + D+++FG++L E+ RR V ++ VED
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV--SNGIVED 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 225
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
E + T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 264
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRV 97
D + ++G+G F V R + G++ A+K + + G + + E I +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H H+V L+ Y++ +V+EF+ L F + R ++ +A + +
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILE 141
Query: 158 LHEDCHP-KIIHRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYL 213
CH IIHRD+K N+LL K K+ DFG+A + RV GT ++
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFM 200
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
APE + DV+ GV+L L++G P T
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 46 FSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 113
Query: 105 L-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAY 157
L +Y++G ++ LV ++VP H + + T+ + + LAY
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+H I HRDIK N+LLD K+ DFG AK +VS + + Y APE
Sbjct: 174 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPE 228
Query: 217 YA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
+ T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 266
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 46 FSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 115
Query: 105 L-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAY 157
L +Y++G ++ LV ++VP H + + T+ + + LAY
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+H I HRDIK N+LLD K+ DFG AK +VS + + Y APE
Sbjct: 176 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPE 230
Query: 217 YA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
+ T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 268
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 35/227 (15%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G +G V RG G+ VA+K S + E+ + E E+ + V +H +++G+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIA 69
Query: 111 A-------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC- 162
+ +Q L+ + +L +L T+D ++ L+I L A GLA+LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 163 ----HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST----RVMGTFGYLA 214
P I HRD+K+ NIL+ + +AD GLA + S + RV GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMA 185
Query: 215 PEYASSGKLTE------KSDVFSFGVMLLELITGRRPVDSTHTFVED 255
PE + + D+++FG++L E+ RR V ++ VED
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV--SNGIVED 228
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 46 FSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 156
Query: 105 L-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAY 157
L +Y++G ++ LV ++VP H + + T+ + + LAY
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+H I HRDIK N+LLD K+ DFG AK +VS + + Y APE
Sbjct: 217 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPE 271
Query: 217 YA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
+ T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 309
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 104
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 165 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 219
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
E + T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 258
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 84
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 145 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 199
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 203
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGE--REFQAEVEIISRVHHKHL 102
++ +LG+G FG V + +E A+K + S + + EVE++ ++ H ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
+ L S +V E L + + R + R+ + S G+ Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHKH- 140
Query: 163 HPKIIHRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
I+HRD+K NILL+ K + K+ DFGL+ NT + R+ GT Y+APE
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRI-GTAYYIAPE-VL 195
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
G EK DV+S GV+L L++G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 52 LGQGGFGYVHR-GVLPNGKEVAIKQLKAGS-GQGERE-FQAEVEIISRVHHKHLVSLVGY 108
+G G +G + +GK + K+L GS + E++ +EV ++ + H ++V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 109 YTAGSQRM-----LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
Y R +V E+ L + KG +L + L L ++CH
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDE-EFVLRVMTQLTLALKECH 128
Query: 164 PK------IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
+ ++HRD+K AN+ LD K K+ DFGLA+I + +T + +GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTFVGTPYYMSPEQ 187
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ EKSD++S G +L EL P
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAG-SGQGEREFQAEVEIISR-VHHKHLVSLVGY 108
LG+G +G V + +P+G+ +A+K+++A + Q ++ +++I R V V+ G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 109 YTAGSQRMLVYEFVPNNTLEFH--LHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
+ E + + +F+ + KG+ T+ KIA+ K L +LH +
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA----SSGK 222
IHRD+K +N+L++ + K+ DFG++ V++ T G Y+APE +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDAGCKPYMAPERINPELNQKG 233
Query: 223 LTEKSDVFSFGVMLLELITGRRPVDSTHT 251
+ KSD++S G+ ++EL R P DS T
Sbjct: 234 YSVKSDIWSLGITMIELAILRFPYDSWGT 262
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGE--REFQAEVEIISRVHHKHL 102
++ +LG+G FG V + +E A+K + S + + EVE++ ++ H ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
+ L S +V E L + + R + R+ + S G+ Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHKH- 140
Query: 163 HPKIIHRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
I+HRD+K NILL+ K + K+ DFGL+ NT + R+ GT Y+APE
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-NTKMKDRI-GTAYYIAPE-VL 195
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
G EK DV+S GV+L L++G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 95
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 156 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 210
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 203
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 52 LGQGGFGYVHR-GVLPNGKEVAIKQLKAGS-GQGERE-FQAEVEIISRVHHKHLVSLVGY 108
+G G +G + +GK + K+L GS + E++ +EV ++ + H ++V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 109 YTAGSQRM-----LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
Y R +V E+ L + KG +L + L L ++CH
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDE-EFVLRVMTQLTLALKECH 128
Query: 164 PK------IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
+ ++HRD+K AN+ LD K K+ DFGLA+I + +T + +GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSPEQ 187
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ EKSD++S G +L EL P
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 25/225 (11%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 81
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 142 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 196
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD 259
E + T DV+S G +L EL+ G +P+ F DS VD
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLG-QPI-----FPGDSGVD 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 80
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 141 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 195
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 52 LGQGGFGYVHRGVLPNGK------EVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVS 104
LG+G FG V + + K VA+K LK + E R+ +E ++ +V+H H++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLH-----GKG--------------RPTMDWLTR- 144
L G + +L+ E+ +L L G G P LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 145 --LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV 202
+ A ++G+ YL E K++HRD+ A NIL+ + K++DFGL++ + ++ V
Sbjct: 151 DLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 203 STRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
R G ++A E T +SDV+SFGV+L E++T
Sbjct: 208 K-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 89
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 148 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 83
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 141
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAG-SGQGEREFQAEVEIISR-VHHKHLVSLVGY 108
LG+G +G V + +P+G+ +A+K+++A + Q ++ +++I R V V+ G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 109 YTAGSQRMLVYEFVPNNTLEFH--LHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
+ E + + +F+ + KG+ T+ KIA+ K L +LH +
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALEHLHSKL--SV 131
Query: 167 IHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTFGYLAPEYA----SSG 221
IHRD+K +N+L++ + K+ DFG++ + DV + G Y+APE +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPELNQK 188
Query: 222 KLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
+ KSD++S G+ ++EL R P DS T
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGT 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 89
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 150 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 204
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGEREFQA---EVEI 93
++ + F +LG+G FG V + AIK LK + + + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 94 ISRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+S H L + + V E++ L +H+ + + T A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEII 129
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTF 210
GL +LH I++RD+K NILLD K+ADFG+ K + D T+ GT
Sbjct: 130 LGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN---EFCGTP 183
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
Y+APE K D +SFGV+L E++ G+ P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 77
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 138 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAP 192
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 101
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 159
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 160 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRP---TMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E L+ + + D + + +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQI--LRGLKYIH 145
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I + ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 139
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 140 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 139
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 140 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 114
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWY 170
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L GKEVA+K QL + S Q + EV I ++H ++V
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLNHPNIVK 77
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L LV E+ + +L GR + K A + + + CH
Sbjct: 78 LFEVIETEKTLYLVXEYASGGEVFDYLVAHGR------XKEKEARAKFRQIVSAVQYCHQ 131
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL 223
K I+HRD+KA N+LLD K+ADFG + + N + G Y APE K
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAPELFQGKKY 189
Query: 224 T-EKSDVFSFGVMLLELITGRRPVD 247
+ DV+S GV+L L++G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 146
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 147 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 89
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 147
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 148 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 80
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 138
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 139 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 145
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVD 247
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVD 247
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 114
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 170
Query: 215 PEYASSGK-LTEKSDVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 45 GFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
++D ++G G FG V++ L + G+ VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 104 SL-VGYYTAGSQR-----MLVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLA 156
L +Y++G ++ LV ++VP H + + T+ + + LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEA-KVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
Y+H I HRDIK N+LLD K+ DFG AK +VS + + Y AP
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAP 191
Query: 216 EYA-SSGKLTEKSDVFSFGVMLLELITGR 243
E + T DV+S G +L EL+ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 115
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 114
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 170
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 119
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 175
Query: 215 PEYASSGK-LTEKSDVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 122
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 178
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 145
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 126
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 115
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 215 PEYASSGK-LTEKSDVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 39 LARATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR 96
L RA + +G+G +G V R + G+ VA+K+++ +G+ E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 97 VH-----HKHLVSLVGYYTAG-----SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
H H ++V L T ++ LV+E V + L +L P + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRV 206
+ +GL +LH +++HRD+K NIL+ + K+ADFGLA+I S T V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSV 179
Query: 207 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
+ T Y APE D++S G + E+ R+P+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G FG VHR V G+ K + + + E+ I++++HH L++L +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+ +L+ EF+ L F M + + +GL ++HE I+H D
Sbjct: 119 DKYEMVLILEFLSGGEL-FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLD 174
Query: 171 IKAANILLDFK--FEAKVADFGLA-KIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
IK NI+ + K K+ DFGLA K+ D V+T T + APE + +
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYT 231
Query: 228 DVFSFGVMLLELITGRRPV---DSTHTFVEDSLVDW 260
D+++ GV+ L++G P D T DW
Sbjct: 232 DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW 267
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 122
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 123 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 178
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG--EREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENI 87
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 145
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 128
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 115
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 215 PEYASSGK-LTEKSDVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 46 FSDANLLGQGGFG--YVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLV 103
F +LG G F ++ + L GK A+K +K + + E+ ++ ++ H+++V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPT-MDWLTRLKIALGSAKGLAYLHEDC 162
+L Y + + LV + V L + +G T D ++ L + K YLHE+
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK---YLHEN- 125
Query: 163 HPKIIHRDIKAANILL---DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
I+HRD+K N+L + + + DFGL+K+ + + + GT GY+APE +
Sbjct: 126 --GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---GIMSTACGTPGYVAPEVLA 180
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
++ D +S GV+ L+ G P
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGK-EVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
++ +G+G +G V K VAIK++ Q +R + E++I+ R H+++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENV 103
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + + D + + +GL Y+H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI--LRGLKYIH 161
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+L++ + K+ DFGLA+IA + H T + T Y APE
Sbjct: 162 S---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G +G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 52 LGQGGFGYVHRGVLPNG-KEVAIKQLKAGSGQGER-------------EFQAEVEIISRV 97
LG G +G V NG E AIK +K R E E+ ++ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H +++ L + LV EF L + R D I G+ Y
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICY 161
Query: 158 LHEDCHPKIIHRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LH+ I+HRDIK NILL+ K K+ DFGL+ S + + R +GT Y+A
Sbjct: 162 LHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-DYKLRDR-LGTAYYIA 216
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
PE K EK DV+S GV++ L+ G P
Sbjct: 217 PEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGEREFQA---EVEI 93
++ + F +LG+G FG V + AIK LK + + + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 94 ISRV-HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+S H L + + V E++ L +H+ + + T A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEII 128
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVMGTF 210
GL +LH I++RD+K NILLD K+ADFG+ K + D T+ GT
Sbjct: 129 LGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---GTP 182
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
Y+APE K D +SFGV+L E++ G+ P
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRP---TMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E L+ + + D + + +GL Y
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAI+++ Q +R + E++I+ R H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 145
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQL---KAGSGQGEREFQAEVEIISRVHH 99
D F +G+G FG V + K++ A+K + K R E++I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL----HGKGRPTMDWLTRLKIALGSAKGL 155
LV+L + +V + + L +HL H K ++ L +AL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD----- 129
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
YL +IIHRD+K NILLD + DF +A + T ++T + GT Y+AP
Sbjct: 130 -YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGTKPYMAP 183
Query: 216 EYASSGK---LTEKSDVFSFGVMLLELITGRRP 245
E SS K + D +S GV EL+ GRRP
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 39 LARATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR 96
L RA + +G+G +G V R + G+ VA+K+++ +G+ E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 97 VH-----HKHLVSLVGYYTAG-----SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
H H ++V L T ++ LV+E V + L +L P + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRV 206
+ +GL +LH +++HRD+K NIL+ + K+ADFGLA+I S T V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSV 179
Query: 207 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
+ T Y APE D++S G + E+ R+P+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 39 LARATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR 96
L RA + +G+G +G V R + G+ VA+K+++ +G+ E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 97 VH-----HKHLVSLVGYYTAG-----SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
H H ++V L T ++ LV+E V + L +L P + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRV 206
+ +GL +LH +++HRD+K NIL+ + K+ADFGLA+I S T V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS--FQMALTSV 179
Query: 207 MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
+ T Y APE D++S G + E+ R+P+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 52 LGQGGFGYVHR-GVLPNGKEVAIKQLKAGS-GQGERE-FQAEVEIISRVHHKHLVSLVGY 108
+G G +G + +GK + K+L GS + E++ +EV ++ + H ++V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 109 YTAGSQRM-----LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH 163
Y R +V E+ L + KG +L + L L ++CH
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDE-EFVLRVMTQLTLALKECH 128
Query: 164 PK------IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
+ ++HRD+K AN+ LD K K+ DFGLA+I + + + +GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DEDFAKEFVGTPYYMSPEQ 187
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ EKSD++S G +L EL P
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQA--EVEIISRVH 98
AT + +G G +G V++ P +G VA+K ++ +G+ EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 99 ---HKHLVSLVGYY-TAGSQR----MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
H ++V L+ T+ + R LV+E V + L +L P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
+GL +LH +C I+HRD+K NIL+ K+ADFGLA+I S V+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALAPVVVTL 175
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
Y APE D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G FG VHR G A K + + + E++ +S + H LV+L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ +++YEF+ L F M ++ KGL ++HE+ + +H D
Sbjct: 119 DDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---VHLD 174
Query: 171 IKAANILLDFKF--EAKVADFGL-AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
+K NI+ K E K+ DFGL A + + V+T GT + APE A + +
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYT 231
Query: 228 DVFSFGVMLLELITGRRP 245
D++S GV+ L++G P
Sbjct: 232 DMWSVGVLSYILLSGLSP 249
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 115
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
L++ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 116 LSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQA--EVEIISRVH 98
AT + +G G +G V++ P +G VA+K ++ +G+ EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 99 ---HKHLVSLVGYY-TAGSQR----MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
H ++V L+ T+ + R LV+E V + L +L P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
+GL +LH +C I+HRD+K NIL+ K+ADFGLA+I S V+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTL 175
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
Y APE D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 52 LGQGGFGYVH--RGVLPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+G+G F V R +L G+EVAIK QL S Q + EV I+ ++H ++V
Sbjct: 23 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVK 78
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L L+ E+ + +L GR + K A + + + CH
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQYCHQ 132
Query: 165 K-IIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGTFGYLAPEYASS 220
K I+HRD+KA N+LLD K+ADFG + + ++ G Y APE
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC-----GAPPYAAPELFQG 187
Query: 221 GKLT-EKSDVFSFGVMLLELITGRRPVD 247
K + DV+S GV+L L++G P D
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGY 108
+L +GGF +V+ + +G+E A+K+L + + R EV + ++ H ++V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 109 YTAGSQR--------MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE 160
+ G + +L+ E +EF + R + T LKI + + + ++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 161 DCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS---DVNTHVSTRVM--------GT 209
P IIHRD+K N+LL + K+ DFG A S D + R + T
Sbjct: 155 Q-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 210 FGYLAPEYA---SSGKLTEKSDVFSFGVMLLELITGRRPVD 247
Y PE S+ + EK D+++ G +L L + P +
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW--LTRLKIALGSA----- 152
++V L+ ++ LV+E H+H + MD LT + + L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 153 -KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 212 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
Y APE K + D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG G FG VHR G A K + + + E++ +S + H LV+L +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
++ +++YEF+ L F M ++ KGL ++HE+ + +H D
Sbjct: 225 DDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---VHLD 280
Query: 171 IKAANILLDFKF--EAKVADFGL-AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
+K NI+ K E K+ DFGL A + + V+T GT + APE A + +
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYT 337
Query: 228 DVFSFGVMLLELITGRRP 245
D++S GV+ L++G P
Sbjct: 338 DMWSVGVLSYILLSGLSP 355
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 52 LGQGGFGYVHRGVLPNGK------EVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVS 104
LG+G FG V + + K VA+K LK + E R+ +E ++ +V+H H++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLH-----GKG--------------RPTMDWLTR- 144
L G + +L+ E+ +L L G G P LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 145 --LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV 202
+ A ++G+ YL E ++HRD+ A NIL+ + K++DFGL++ + ++ V
Sbjct: 151 DLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 203 STRVMGTF--GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
R G ++A E T +SDV+SFGV+L E++T
Sbjct: 208 K-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQA-------EVEIISRVHHKHLVS 104
+G+G +G V++ G+ A+K+++ E+E + E+ I+ + H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L + +LV+E + + + +G ++ +T L G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKL 223
+++HRD+K N+L++ + E K+ADFGLA+ A + T + T Y AP+ S K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 224 TEKSDVFSFGVMLLELITG 242
+ D++S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL------L 116
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 213 LAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 37 EELARATDGFSDANLLGQGGFGYVHRGVLPNGKEV----------AIKQLKAGSGQGERE 86
+E+ + F ++G+G FG V + N + + +K+ + + ER+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 87 F--QAEVEIISRVHH-----KHLVSLVGYYTAGSQRMLVYEF---VPNNTLEFHLHGKGR 136
+ + I+ +H+ HL ++ YY G L+ +F +P + F++
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI----- 181
Query: 137 PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
+ +A+ S L Y +HRDIK N+LLD ++ADFG +
Sbjct: 182 ------GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN 226
Query: 197 DVNTHVSTRVMGTFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
D T S+ +GT Y++PE + GK + D +S GV + E++ G P
Sbjct: 227 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP------ 280
Query: 252 FVEDSLVDWARPLLN 266
F +SLV+ ++N
Sbjct: 281 FYAESLVETYGKIMN 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 51/255 (20%)
Query: 37 EELARATDGFSDANLLGQGGFGYVHRGVLPNGKEV----------AIKQLKAGSGQGERE 86
+E+ + F ++G+G FG V + N + + +K+ + + ER+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 87 F--QAEVEIISRVHH-----KHLVSLVGYYTAGSQRMLVYEF---VPNNTLEFHLHGKGR 136
+ + I+ +H+ HL ++ YY G L+ +F +P + F++
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI----- 197
Query: 137 PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS 196
+ +A+ S L Y +HRDIK N+LLD ++ADFG +
Sbjct: 198 ------GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN 242
Query: 197 DVNTHVSTRVMGTFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
D T S+ +GT Y++PE + GK + D +S GV + E++ G P
Sbjct: 243 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP------ 296
Query: 252 FVEDSLVDWARPLLN 266
F +SLV+ ++N
Sbjct: 297 FYAESLVETYGKIMN 311
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL------L 113
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL------L 115
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 171
Query: 213 LAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQA--EVEIISRVH 98
AT + +G G +G V++ P +G VA+K ++ +G+ EV ++ R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 99 ---HKHLVSLVGYY-TAGSQR----MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
H ++V L+ T+ + R LV+E V + L +L P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
+GL +LH +C I+HRD+K NIL+ K+ADFGLA+I S V+ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALFPVVVTL 175
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
Y APE D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQL---KAGSGQGEREFQAEVEIISRVHHKHLVSLVGY 108
+G+G +G V++ G+ A+K++ K G + E+ I+ + H ++V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 109 YTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
+ +LV+E + + + +G ++ +T L G+AY H+ +++H
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKLTEKS 227
RD+K N+L++ + E K+ADFGLA+ A + T + T Y AP+ S K +
Sbjct: 124 RDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 228 DVFSFGVMLLELITG 242
D++S G + E++ G
Sbjct: 183 DIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQA-------EVEIISRVHHKHLVS 104
+G+G +G V++ G+ A+K+++ E+E + E+ I+ + H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L + +LV+E + + + +G ++ +T L G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKL 223
+++HRD+K N+L++ + E K+ADFGLA+ A + T + T Y AP+ S K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 224 TEKSDVFSFGVMLLELITG 242
+ D++S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 145
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H + T Y APE
Sbjct: 146 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
+++ + +G+G +G V N VAIK++ Q +R + E++I+ R H+++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
+ + A + + ++ + +E + L + D + + +GL Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKYIH 146
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAPEY 217
++HRD+K +N+LL+ + K+ DFGLA++A + H + T Y APE
Sbjct: 147 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
+ K T+ D++S G +L E+++ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 113
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 113
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL------L 116
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 213 LAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 116
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 115
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 171
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 113
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 115
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 171
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 114
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 170
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 114
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y A
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRA 170
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 115
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 171
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQL---KAGSGQGEREFQAE---VEIISR 96
+ FS ++G+GGFG V+ + GK A+K L + QGE E + ++S
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--HGKGRPTMDWLTRLKIALGSAKG 154
+V + + + + + + L +HL HG +I LG
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG---- 303
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
L ++H +++RD+K ANILLD +++D GLA S H S +GT GY+A
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMA 357
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGRRP 245
PE G + S D FS G ML +L+ G P
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL------L 114
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 170
Query: 213 LAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 116
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 117
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 173
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 113
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 52 LGQGGFGYVHRGVLP----NGKEVAIKQLKAGSGQG-EREFQAEVEIISRVHHKHLVSLV 106
LG G F V VL GK A+K + + +G E + E+ ++ ++ H+++V+L
Sbjct: 30 LGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPT-MDWLTRLKIALGSAKGLAYLHEDCHPK 165
Y + + LV + V L + KG T D T ++ L + + YLH
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLH---RMG 140
Query: 166 IIHRDIKAANILL---DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
I+HRD+K N+L D + + ++DFGL+K+ V + GT GY+APE +
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYVAPEVLAQKP 198
Query: 223 LTEKSDVFSFGVMLLELITGRRP 245
++ D +S GV+ L+ G P
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+ +++ + A E+ ++ ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 115
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+ +++ + A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 114
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V T + T Y A
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 170
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + +F L G P + +L +L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------L 114
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 170
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQL---KAGSGQGEREFQAE---VEIISR 96
+ FS ++G+GGFG V+ + GK A+K L + QGE E + ++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--HGKGRPTMDWLTRLKIALGSAKG 154
+V + + + + + + L +HL HG +I LG
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG---- 304
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
L ++H +++RD+K ANILLD +++D GLA S H S +GT GY+A
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMA 358
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGRRP 245
PE G + S D FS G ML +L+ G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
+G+G +G V G G++VA+K E + E EI V +H +++G+ A
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRH-ENILGFIAA 99
Query: 112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-- 162
+Q L+ ++ N +L +L T+D + LK+A S GL +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 163 ---HPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASD---VNTHVSTRVMGTFGYLAP 215
P I HRD+K+ NIL+ +AD GLA K SD V+ +TRV GT Y+ P
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPP 215
Query: 216 EYASSG------KLTEKSDVFSFGVMLLELITGRRPV 246
E + +D++SFG++L E+ RR V
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV 250
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 114
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y A
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRA 170
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGERE-FQAEVEIISRVHHKHLVSLVGYY 109
LG+G G V V +E VA+K + E + E+ I ++H+++V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
G+ + L E+ L + G P D R L + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMA--GVVYLH---GIGITH 127
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKL-TEK 226
RDIK N+LLD + K++DFGLA + N + ++ GT Y+APE + E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 SDVFSFGVMLLELITGRRPVDS 248
DV+S G++L ++ G P D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 44 DGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHH 99
+ F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSAKG 154
++V L+ ++ LV+EF+ + +F L G P + +L +L +G
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQG 116
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y A
Sbjct: 117 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRA 172
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGR 243
PE K + D++S G + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 38/221 (17%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLK---AGSGQGEREFQAEVEIISRVH-HKHLVSLV 106
LG+G +G V + + G+ VA+K++ S +R F+ E+ I++ + H+++V+L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 107 GYYTAGSQR--MLVYEFVPNNTLEFHLHGKGRPT-MDWLTRLKIALGSAKGLAYLHEDCH 163
A + R LV+++ +E LH R ++ + + + K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG-- 128
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAK-----------IASDVNTH---------VS 203
++HRD+K +NILL+ + KVADFGL++ I +N + +
Sbjct: 129 -GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 204 TRVMGTFGYLAPEY-ASSGKLTEKSDVFSFGVMLLELITGR 243
T + T Y APE S K T+ D++S G +L E++ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 46/229 (20%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEI--ISRVHHKH 101
D L+G+G +G V++G L + + VA+K + Q F E I + + H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 102 LVSLVGYYTAGSQR---------MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+ + G +R +LV E+ PN +L +L T DW++ ++A
Sbjct: 69 ----IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVT 121
Query: 153 KGLAYLHEDC------HPKIIHRDIKAANILLDFKFEAKVADFGLA---------KIASD 197
+GLAYLH + P I HRD+ + N+L+ ++DFGL+ + +
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 198 VNTHVSTRVMGTFGYLAPEYASSG-------KLTEKSDVFSFGVMLLEL 239
N +S +GT Y+APE ++ D+++ G++ E+
Sbjct: 182 DNAAISE--VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS-FDETCTRFYTA-EIVSALEY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ ++ SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ H+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHE 83
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 141
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQ 88
S F + +D + LG+G F V R V G E A K + K S + ++ +
Sbjct: 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 89 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDW 141
E I ++ H ++V L S LV++ V L EF+ +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 136
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDV 198
+ + +AY H + I+HR++K N+LL K + K+ADFGLA +D
Sbjct: 137 IL---------ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND- 183
Query: 199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ GT GYL+PE ++ D+++ GV+L L+ G P
Sbjct: 184 -SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+H LV L + S+ V E+V L FH+ + R + R A S L Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-ALNY 168
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LHE II+RD+K N+LLD + K+ D+G+ K ST GT Y+APE
Sbjct: 169 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPEI 224
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
D ++ GV++ E++ GR P D
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 52 LGQGGFGYVHRGVLP--------NGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHL 102
LGQG F + +GV + EV +K L KA E F+A ++S++ HKHL
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
V G G + +LV EFV +L+ +L K + ++ L +L++A A + +L E+
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFLEEN- 132
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAPEYA 218
+IH ++ A NILL + + K + K+ SD ++ + ++ PE
Sbjct: 133 --TLIHGNVCAKNILLIREEDRKTGNPPFIKL-SDPGISITVLPKDILQERIPWVPPECI 189
Query: 219 SSGK-LTEKSDVFSFGVMLLELITG 242
+ K L +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQL---KAGSGQGEREFQAE---VEIISR 96
+ FS ++G+GGFG V+ + GK A+K L + QGE E + ++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--HGKGRPTMDWLTRLKIALGSAKG 154
+V + + + + + + L +HL HG +I LG
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG---- 304
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
L ++H + +++RD+K ANILLD +++D GLA S H S +GT GY+A
Sbjct: 305 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMA 358
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGRRP 245
PE G + S D FS G ML +L+ G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQL---KAGSGQGEREFQAE---VEIISR 96
+ FS ++G+GGFG V+ + GK A+K L + QGE E + ++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHL--HGKGRPTMDWLTRLKIALGSAKG 154
+V + + + + + + L +HL HG +I LG
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG---- 304
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
L ++H + +++RD+K ANILLD +++D GLA S H S +GT GY+A
Sbjct: 305 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMA 358
Query: 215 PEYASSGKLTEKS-DVFSFGVMLLELITGRRP 245
PE G + S D FS G ML +L+ G P
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+EF+ + F L G P + +L +L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL------L 116
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 40 ARATDGFSDANLLGQGGFGYV----HRGVLPNGKEV--AIKQLKAGS---GQGEREFQAE 90
A+ +D F ++G+G FG V H+ +EV A+K L+ + + E+ +E
Sbjct: 35 AKPSD-FHFLKVIGKGSFGKVLLARHKA-----EEVFYAVKVLQKKAILKKKEEKHIMSE 88
Query: 91 VEIISR-VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIAL 149
++ + V H LV L + + V +++ L +HL + R ++ R A
Sbjct: 89 RNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARF-YAA 146
Query: 150 GSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 209
A L YLH I++RD+K NILLD + + DFGL K + N+ ST GT
Sbjct: 147 EIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGT 202
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
YLAPE D + G +L E++ G P S +T
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 53/238 (22%)
Query: 41 RATDGFSDANLLGQGGFGYV--HRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH 98
R F + +LGQG FG V R L + + AIK+++ + + +EV +++ ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 99 HKHLVSLVGYYTAGSQR----------------MLVYEFVPNNTLEFHLHGKG-RPTMDW 141
H+++V YY A +R + E+ N TL +H + D
Sbjct: 61 HQYVVR---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
RL + A L+Y+H IIHRD+K NI +D K+ DFGLAK N H
Sbjct: 118 YWRLFRQILEA--LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK-----NVH 167
Query: 202 VS------------------TRVMGTFGYLAPEYAS-SGKLTEKSDVFSFGVMLLELI 240
S T +GT Y+A E +G EK D++S G++ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 70 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 125
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 126 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 69 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 124
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 125 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 46 FSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEV---------EIIS 95
+ D +G G +G V V G +VAIK+L R FQ+E+ ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-------RPFQSELFAKRAYRELRLLK 79
Query: 96 RVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIA 148
+ H++++ L+ +T + LV F+ + + H K G + +L +
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML- 138
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRVM 207
KGL Y+H IIHRD+K N+ ++ E K+ DFGLA+ A S++ V TR
Sbjct: 139 ----KGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-- 189
Query: 208 GTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
Y APE + + T+ D++S G ++ E+ITG+
Sbjct: 190 ---WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 49 ANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLV 106
+ LLG+G + V V L NGKE A+K ++ +G EVE + + +K+++ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
++ ++ LV+E + ++ H+ + +R + A L +LH I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR--VVRDVAAALDFLHTK---GI 132
Query: 167 IHRDIKAANILLDFKFE---AKVADFGLA------KIASDVNTHVSTRVMGTFGYLAPE- 216
HRD+K NIL + + K+ DF L + + T T G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 217 ---YASSGKLTEK-SDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD--WARPLLNRAIE 270
+ +K D++S GV+L +++G P FV D W R + R +
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP------FVGHCGADCGWDRGEVCRVCQ 246
Query: 271 DGNFDTLVDPK 281
+ F+++ + K
Sbjct: 247 NKLFESIQEGK 257
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ H+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHE 83
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLE---FHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+++ + A + + ++ + +E + L + D + + +GL Y
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI--LRGLKY 141
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVMGTFGYLAP 215
+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T + T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 216 EYASSGK-LTEKSDVFSFGVMLLELITGR 243
E + K T+ D++S G +L E+++ R
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 67 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 122
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 123 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 53/238 (22%)
Query: 41 RATDGFSDANLLGQGGFGYV--HRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH 98
R F + +LGQG FG V R L + + AIK+++ + + +EV +++ ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 99 HKHLVSLVGYYTAGSQR----------------MLVYEFVPNNTLEFHLHGKG-RPTMDW 141
H+++V YY A +R + E+ N TL +H + D
Sbjct: 61 HQYVVR---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
RL + A L+Y+H IIHRD+K NI +D K+ DFGLAK N H
Sbjct: 118 YWRLFRQILEA--LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK-----NVH 167
Query: 202 VS------------------TRVMGTFGYLAPEYAS-SGKLTEKSDVFSFGVMLLELI 240
S T +GT Y+A E +G EK D++S G++ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 40 ARATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGEREFQA---EVEIIS 95
+ TD F+ +LG+G FG V +E+ AIK LK + + + E +++
Sbjct: 16 VKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 96 RVHHK-HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLH--GKGRPTMDWLTRLKIALGSA 152
+ L L + + V E+V L +H+ GK + +I++G
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG-- 132
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-VMGTFG 211
L +LH+ II+RD+K N++LD + K+ADFG+ K + V+TR GT
Sbjct: 133 --LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPD 185
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
Y+APE + + D +++GV+L E++ G+ P D
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 68 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 123
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 124 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 148
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
+ + SD+++ G ++ +L+ G P + + ++
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 145
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 148
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 46 FSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHK 100
+++ + +G+G +G V + V N VAIK++ Q +R + E++I+ R H+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 101
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGS--------- 151
+++ + A + E + + L HL G D LK S
Sbjct: 102 NIIGINDIIRAPT-----IEQMKDVYLVTHLMGA-----DLYKLLKTQHLSNDHICYFLY 151
Query: 152 --AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--TRVM 207
+GL Y+H ++HRD+K +N+LL+ + K+ DFGLA++A + H T +
Sbjct: 152 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 208 GTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
T Y APE + K T+ D++S G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRFYTA-EIVSALEY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVH--RGVLPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRV 97
+ + F +G+G +G V+ R L G+ VA+K+++ + A E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFH----LHGKGRPTM-DWLTRLKIALGSA 152
+H ++V L+ ++ LV+E V + +F L G P + +L +L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL------L 116
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+GLA+ H +++HRD+K N+L++ + K+ADFGLA+ A V + T Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGR 243
APE K + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
V L + + + N L ++ G + TR A L YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEYLH 154
Query: 160 EDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPEYA 218
IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 155 GK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
+ + SD+++ G ++ +L+ G P + + ++
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRFYTA-EIVSALEY 145
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH 101
+D F + LG+G V+R K A+K LK + + + E+ ++ R+ H +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKG----RPTMDWLTRLKIALGSAKGLAY 157
++ L + ++ LV E V L + KG R D + ++ + +AY
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAVAY 163
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
LHE+ I+HRD+K N+L K+ADFGL+KI + + V GT GY A
Sbjct: 164 LHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCA 218
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
PE + D++S G++ L+ G P
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 95 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 150
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 151 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
+ + SD+++ G ++ +L+ G P + + ++
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRFYTA-EIVSALEY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 145
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 74 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRFYTA-EIVSALEY 129
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 130 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQ-LKAGSGQGEREFQA-EVEIISRV 97
++ + + + L+G+G +G V + + G+ VAIK+ L++ + ++ E++++ ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLE-FHLHGKGRPTMDWLTRLKIALGSAKGLA 156
H++LV+L+ + LV+EFV + L+ L G +D+ K G+
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIG 138
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+ H IIHRDIK NIL+ K+ DFG A+ + V + T Y APE
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEVATRWYRAPE 194
Query: 217 -YASSGKLTEKSDVFSFGVMLLELITG 242
K + DV++ G ++ E+ G
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRFYTA-EIVSALEY 144
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 145 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHHKHLVS 104
LG+ FG V++G L + VAIK LK G EF+ E + +R+ H ++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 105 LVGYYTAGSQRMLVYEFVPNNTL-EFHL----HGKGRPTMDWLTRLKIALGS-------- 151
L+G T +++ + + L EF + H T D T +K AL
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT-VKSALEPPDFVHLVA 152
Query: 152 --AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVM 207
A G+ YL ++H+D+ N+L+ K K++D GL + A+D + ++
Sbjct: 153 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
++APE GK + SD++S+GV+L E+ + G +P
Sbjct: 210 -PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRFYTA-EIVSALEY 144
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 145 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 21/229 (9%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQL---KAGSGQGERE 86
F A +D + +LG+G FG V +L G+E A+K + + +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 87 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
EV+++ ++ H +++ L ++ LV E L + + R + +
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAAR 136
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVS 203
I G+ Y+H++ KI+HRD+K N+LL+ K + ++ DFGL+ + + +
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMK 192
Query: 204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF 252
++ GT Y+APE G EK DV+S GV+L L++G P + + +
Sbjct: 193 DKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQA-----EVEIIS 95
AT + +G G +G V++ P +G VA+K ++ +G G EV ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 96 RVH---HKHLVSLVGYY-TAGSQR----MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKI 147
R+ H ++V L+ T+ + R LV+E V + L +L P + T +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 148 ALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVM 207
+GL +LH +C I+HRD+K NIL+ K+ADFGLA+I S T V+
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVV 180
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPV 246
T Y APE D++S G + E+ R+P+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-----EFHLHGKGRPTMD 140
+F+ E++II+ + +++ ++ G T + ++YE++ N+++ F + K
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 141 WLTRLKIALGSA-KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+ +K + S +Y+H + I HRD+K +NIL+D K++DFG ++ D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 200 THVSTRVMGTFGYLAPEYAS--SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE 254
S GT+ ++ PE+ S S K D++S G+ L + P + VE
Sbjct: 207 IKGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
F +LLG+G +G V P G+ VAIK+++ R + E++I+ H+++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIAL-GSAKGLAYLHED 161
+++ S ++ ++ LH M ++ + + + + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS---------TRVMGTFGY 212
+IHRD+K +N+L++ + KV DFGLA+I + S T + T Y
Sbjct: 132 ---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 213 LAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPV 246
APE +S K + DV+S G +L EL RRP+
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 52 LGQGGFGYVHRGVLP--------NGKEVAIKQL-KAGSGQGEREFQAEVEIISRVHHKHL 102
LGQG F + +GV + EV +K L KA E F+A ++S++ HKHL
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC 162
V G G + +LV EFV +L+ +L K + ++ L +L++A A + +L E+
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMHFLEEN- 132
Query: 163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAPEYA 218
+IH ++ A NILL + + K + K+ SD ++ + ++ PE
Sbjct: 133 --TLIHGNVCAKNILLIREEDRKTGNPPFIKL-SDPGISITVLPKDILQERIPWVPPECI 189
Query: 219 SSGK-LTEKSDVFSFGVMLLELITG 242
+ K L +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAG-SGQGEREFQAEVEIISR-VHHKHLVSLVGY 108
LG+G +G V + +P+G+ A+K+++A + Q ++ +++I R V V+ G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 109 YTAGSQRMLVYEFVPNNTLEFH--LHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKI 166
+ E + +F+ + KG+ T+ KIA+ K L +LH +
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALEHLHSKL--SV 158
Query: 167 IHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMGTFGYLAPEYA----SSG 221
IHRD+K +N+L++ + K DFG++ + DV + G Y APE +
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPERINPELNQK 215
Query: 222 KLTEKSDVFSFGVMLLELITGRRPVDSTHT 251
+ KSD++S G+ +EL R P DS T
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGT 245
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
F +LLG+G +G V P G+ VAIK+++ R + E++I+ H+++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIAL-GSAKGLAYLHED 161
+++ S ++ ++ LH M ++ + + + + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS---------TRVMGTFGY 212
+IHRD+K +N+L++ + KV DFGLA+I + S T + T Y
Sbjct: 132 ---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 213 LAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPV 246
APE +S K + DV+S G +L EL RRP+
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 53/231 (22%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH------ 98
+ +++G+G V R V G E A+K ++ + + E EV +R
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 99 ---HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAK-- 153
H H+++L+ Y + S LV++ + L D+LT K+AL +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGEL-----------FDYLTE-KVALSEKETR 203
Query: 154 --------GLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST- 204
+++LH + I+HRD+K NILLD + +++DFG + H+
Sbjct: 204 SIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS-------CHLEPG 253
Query: 205 ----RVMGTFGYLAPEYASSGK------LTEKSDVFSFGVMLLELITGRRP 245
+ GT GYLAPE ++ D+++ GV+L L+ G P
Sbjct: 254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHH 99
+D + LG+G F V R V G E A K + K S + ++ + E I ++ H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIALGSA 152
++V L S LV++ V L EF+ + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL--------- 114
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGT 209
+ +AY H + I+HR++K N+LL K + K+ADFGLA +D + GT
Sbjct: 115 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGT 169
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GYL+PE ++ D+++ GV+L L+ G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHH 99
+D + LG+G F V R V G E A K + K S + ++ + E I ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIALGSA 152
++V L S LV++ V L EF+ + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL--------- 115
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGT 209
+ +AY H + I+HR++K N+LL K + K+ADFGLA +D + GT
Sbjct: 116 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGT 170
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GYL+PE ++ D+++ GV+L L+ G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQL---KAGSGQGERE 86
F A +D + +LG+G FG V +L G+E A+K + + +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 87 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
EV+++ ++ H +++ L ++ LV E L + + R + + +
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--VDAAR 130
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVS 203
I G+ Y+H++ KI+HRD+K N+LL+ K + ++ DFGL+ TH
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFE 180
Query: 204 TR-----VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF 252
+GT Y+APE G EK DV+S GV+L L++G P + + +
Sbjct: 181 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY 233
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQLK-AGSGQGEREFQAEVEIISRVHHKHLVS 104
LG+ FG V++G L + VAIK LK G EF+ E + +R+ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 105 LVGYYTAGSQRMLVYEFVPNNTL-EFHL----HGKGRPTMDWLTRLKIALGS-------- 151
L+G T +++ + + L EF + H T D T +K AL
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT-VKSALEPPDFVHLVA 135
Query: 152 --AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK--IASDVNTHVSTRVM 207
A G+ YL ++H+D+ N+L+ K K++D GL + A+D + ++
Sbjct: 136 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
++APE GK + SD++S+GV+L E+ + G +P
Sbjct: 193 -PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGY-VHRGVLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 145
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHH 99
+D + LG+G F V R V G E A K + K S + ++ + E I ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIALGSA 152
++V L S LV++ V L EF+ + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL--------- 115
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGT 209
+ +AY H + I+HR++K N+LL K + K+ADFGLA +D + GT
Sbjct: 116 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SEAWHGFAGT 170
Query: 210 FGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GYL+PE ++ D+++ GV+L L+ G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 27/232 (11%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSGQGEREFQA 89
F A +D + +LG+G FG V +L G+E A+K + + + + ++
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKES 95
Query: 90 ---EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
EV+++ ++ H +++ L ++ LV E L + + R + +
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAAR 153
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVS 203
I G+ Y+H++ KI+HRD+K N+LL+ K + ++ DFGL+ + S
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEAS 205
Query: 204 TRV---MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF 252
++ +GT Y+APE G EK DV+S GV+L L++G P + + +
Sbjct: 206 KKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEY 256
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREF---QAEVEIISRVHH 99
+ F +LG+G F V L +E AIK L+ E + E +++SR+ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 100 KHLVSLVGYYTAGSQRMLVY--EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
V L Y+T L + + N L ++ G + TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGS-FDETCTRFYTA-EIVSALEY 147
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPE 216
LH IIHRD+K NILL+ ++ DFG AK+ S + + +GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ + SD+++ G ++ +L+ G P
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQL---KAGSGQGERE 86
F A +D + +LG+G FG V +L G+E A+K + + +
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKES 96
Query: 87 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
EV+++ ++ H +++ L ++ LV E L + + R + +
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAAR 154
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVS 203
I G+ Y+H++ KI+HRD+K N+LL+ K + ++ DFGL+ + S
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-----THFEAS 206
Query: 204 TRV---MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF 252
++ +GT Y+APE G EK DV+S GV+L L++G P + + +
Sbjct: 207 KKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEY 257
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +ELA+ + + + + +G G +G V G VA+K+L R
Sbjct: 1 RPTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 53
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 108
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 109 LNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 166 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGKE-VAIKQLKAG----SGQG-EREFQAEVEIISRVHH 99
+ + LG+G F V++ N + VAIK++K G + G R E++++ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKI---ALGSAKGLA 156
+++ L+ + S LV++F +E L + LT I L + +GL
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
YLH+ I+HRD+K N+LLD K+ADFGLAK N +V+ T Y APE
Sbjct: 127 YLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPE 182
Query: 217 YASSGKLT-EKSDVFSFGVMLLELI 240
++ D+++ G +L EL+
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 44 DGFSDANLLGQGGFGYVHRGVLPNGKEV----------AIKQLKAGSGQGEREF--QAEV 91
+ F ++G+G FG V L N +V +K+ + + ER+ +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 92 EIISRVHH-----KHLVSLVGYYTAGSQRMLVYEF---VPNNTLEFHLHGKGRPTMDWLT 143
+ I+ +H+ +L ++ YY G L+ +F +P F+L
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL-----------A 182
Query: 144 RLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS 203
+ IA+ S L Y +HRDIK NIL+D ++ADFG + T S
Sbjct: 183 EMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233
Query: 204 TRVMGTFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV 258
+ +GT Y++PE + G+ + D +S GV + E++ G P F +SLV
Sbjct: 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP------FYAESLV 287
Query: 259 DWARPLLN 266
+ ++N
Sbjct: 288 ETYGKIMN 295
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+H LV L + S+ V E+V L FH+ + R + R A S L Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-ALNY 136
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LHE II+RD+K N+LLD + K+ D+G+ K S GT Y+APE
Sbjct: 137 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX-FCGTPNYIAPEI 192
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
D ++ GV++ E++ GR P D
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K LK + E E ++
Sbjct: 153 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + + D + SA L YL
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYL 267
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H + +++RD+K N++LD K+ DFGL K + T GT YLAPE
Sbjct: 268 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVL 324
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 44 DGFSDANLLGQGGFGYVHR-GVLPNGKEVAIKQLKAGSGQGERE-FQAEVEIISRVHHKH 101
D F LG G FG VH +G E IK + Q E +AE+E++ + H +
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHL---HGKGRPTMD-WLTRLKIALGSAKGLAY 157
++ + + +V E L + +G+ + ++ L + +A LAY
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA--LAY 139
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGYLA 214
H ++H+D+K NIL K+ DFGLA++ + H ST GT Y+A
Sbjct: 140 FHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEH-STNAAGTALYMA 194
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELITGRRP--------VDSTHTFVEDSLVDWARPLLN 266
PE +T K D++S GV++ L+TG P V T+ E + RPL
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTP 253
Query: 267 RAIE 270
+A++
Sbjct: 254 QAVD 257
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K LK + E E ++
Sbjct: 150 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + + D + SA L YL
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYL 264
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H + +++RD+K N++LD K+ DFGL K + T GT YLAPE
Sbjct: 265 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVL 321
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 19/207 (9%)
Query: 47 SDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSL 105
S +LG G FG VH+ G ++A K +K + + E + E+ +++++ H +L+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIAL---GSAKGLAYLHEDC 162
+ + + +LV E+V L + + LT L L +G+ ++H+
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYN----LTELDTILFMKQICEGIRHMHQ-- 205
Query: 163 HPKIIHRDIKAANILL---DFKFEAKVADFGLAKIASDVNTHVSTRV-MGTFGYLAPEYA 218
I+H D+K NIL D K + K+ DFGLA+ +V GT +LAPE
Sbjct: 206 -MYILHLDLKPENILCVNRDAK-QIKIIDFGLAR---RYKPREKLKVNFGTPEFLAPEVV 260
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
+ ++ +D++S GV+ L++G P
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+H LV L + S+ V E+V L FH+ + R + R A S L Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-ALNY 125
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LHE II+RD+K N+LLD + K+ D+G+ K ++ GT Y+APE
Sbjct: 126 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTSXFCGTPNYIAPEI 181
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
D ++ GV++ E++ GR P D
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 52 LGQGGFGYVHRGVLPNGK----EVAIKQLK--AGSGQGEREFQAEVEIISRVHHKHLVSL 105
LG G +G V +L K E AIK ++ + S + EV ++ + H +++ L
Sbjct: 45 LGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 106 VGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
++ LV E L + +H +D +K L G+ YLH+
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLHK---H 155
Query: 165 KIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG 221
I+HRD+K N+LL+ K + K+ DFGL+ + N +GT Y+APE
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKERLGTAYYIAPEVLRK- 212
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
K EK DV+S GV+L L+ G P
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
+H LV L + S+ V E+V L FH+ + R + R A S L Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-ALNY 121
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
LHE II+RD+K N+LLD + K+ D+G+ K ++ GT Y+APE
Sbjct: 122 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTSXFCGTPNYIAPEI 177
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
D ++ GV++ E++ GR P D
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 13/216 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRV 97
D + ++G+G F V R + G++ A+K + + G + + E I +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H H+V L+ Y++ +V+EF+ L F + R ++ +A + +
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILE 143
Query: 158 LHEDCHP-KIIHRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYL 213
CH IIHRD+K +LL K K+ FG+A + RV GT ++
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFM 202
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
APE + DV+ GV+L L++G P T
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGERE-FQAEVEIISRVH 98
R F LG+GGFG V + AIK+++ + + RE EV+ ++++
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNT-----LEFHLHGK--------GRPTMDWLTR- 144
H +V Y+ A ++ + P++ ++ L K GR T++ R
Sbjct: 62 HP---GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 145 --LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV 202
L I L A+ + +LH ++HRD+K +NI KV DFGL A D +
Sbjct: 119 VCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVT-AMDQDEEE 174
Query: 203 STRV------------MGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI 240
T + +GT Y++PE + K D+FS G++L EL+
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 51 LLGQGGFGYVHRGVLPN----GKEVAIKQLKA-GSGQGE-REFQAEVEIISRVHHKHLVS 104
+LG+G FG V G L +VA+K +K S Q E EF +E + H +++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 105 LVGYYTAGSQR-----MLVYEFVPNNTLEFHLH----GKGRPTMDWLTRLKIALGSAKGL 155
L+G S + M++ F+ L +L G + T LK + A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT-FGYLA 214
YL + +HRD+ A N +L VADFGL+K + + R+ ++A
Sbjct: 161 EYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELIT 241
E + T KSDV++FGV + E+ T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHL 102
F +LLG+G +G V P G+ VAIK+++ R + E++I+ H+++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIAL-GSAKGLAYLHED 161
+++ S ++ ++ LH M ++ + + + + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 162 CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS---------TRVMGTFGY 212
+IHRD+K +N+L++ + KV DFGLA+I + S + T Y
Sbjct: 132 ---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 213 LAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPV 246
APE +S K + DV+S G +L EL RRP+
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 13/216 (6%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIK-----QLKAGSGQGEREFQAEVEIISRV 97
D + ++G+G F V R + G++ A+K + + G + + E I +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAY 157
H H+V L+ Y++ +V+EF+ L F + R ++ +A + +
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILE 141
Query: 158 LHEDCHP-KIIHRDIKAANILLDFK---FEAKVADFGLAKIASDVNTHVSTRVMGTFGYL 213
CH IIHRD+K +LL K K+ FG+A + RV GT ++
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFM 200
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST 249
APE + DV+ GV+L L++G P T
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 51 LLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGEREFQAEVEIISRV-----HHKHLVS 104
+LG+G FG V E+ A+K LK + + + + + RV L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPFLTQ 406
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP 164
L + + V E+V L +H+ GR + A A GL +L
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK--- 461
Query: 165 KIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-VMGTFGYLAPEYASSGKL 223
II+RD+K N++LD + K+ADFG+ K ++ V+T+ GT Y+APE +
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 224 TEKSDVFSFGVMLLELITGRRPVD 247
+ D ++FGV+L E++ G+ P +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 52 LGQGGFGYVHRG-VLPNGKEVAIKQLKA---GSGQGEREFQAEVEIISRVHHKHLVSLVG 107
+G+G F V+R L +G VA+K+++ + + E++++ +++H +++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLH--GKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK 165
+ ++ +V E L + K + + T K + L ++H +
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---R 156
Query: 166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTE 225
++HRDIK AN+ + K+ D GL + S T + V GT Y++PE
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 215
Query: 226 KSDVFSFGVMLLELITGRRP 245
KSD++S G +L E+ + P
Sbjct: 216 KSDIWSLGCLLYEMAALQSP 235
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 91/215 (42%), Gaps = 16/215 (7%)
Query: 39 LARAT-DGFSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AE 90
+AR T + F LLG+G FG V +L G+ A+K LK + E E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 59
Query: 91 VEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
++ H L +L + + V E+ L FHL + + D +
Sbjct: 60 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 119
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF 210
SA L YLH + +++RD+K N++LD K+ DFGL K + GT
Sbjct: 120 SA--LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKXFCGTP 174
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
YLAPE D + GV++ E++ GR P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE ++ + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGVLPNGKEV-AIKQLKAGSGQGEREFQAEVEIISRV-- 97
+ TD F+ +LG+G FG V E+ A+K LK + + + + + RV
Sbjct: 18 KLTD-FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLA 75
Query: 98 ---HHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
L L + + V E+V L +H+ GR + A A G
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIG 133
Query: 155 LAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-VMGTFGYL 213
L +L II+RD+K N++LD + K+ADFG+ K ++ V+T+ GT Y+
Sbjct: 134 LFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYI 188
Query: 214 APEYASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
APE + + D ++FGV+L E++ G+ P +
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 53/238 (22%)
Query: 41 RATDGFSDANLLGQGGFGYV--HRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH 98
R F + +LGQG FG V R L + + AIK+++ + + +EV +++ ++
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNAL-DSRYYAIKKIR-HTEEKLSTILSEVXLLASLN 60
Query: 99 HKHLVSLVGYYTAGSQR----------------MLVYEFVPNNTLEFHLHGKG-RPTMDW 141
H+++V YY A +R + E+ N TL +H + D
Sbjct: 61 HQYVVR---YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
RL + A L+Y+H IIHR++K NI +D K+ DFGLAK N H
Sbjct: 118 YWRLFRQILEA--LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK-----NVH 167
Query: 202 VS------------------TRVMGTFGYLAPEYAS-SGKLTEKSDVFSFGVMLLELI 240
S T +GT Y+A E +G EK D +S G++ E I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 16/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 10 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + T + + SA L YL
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYL 124
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H +++RDIK N++LD K+ DFGL K + T GT YLAPE
Sbjct: 125 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVL 180
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 16/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + T + + SA L YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYL 121
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H +++RDIK N++LD K+ DFGL K + T GT YLAPE
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVL 177
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 31/234 (13%)
Query: 34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSGQGEREFQA 89
F A +D + +LG+G FG V +L G+E A+K + + + + ++
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 90 ---EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK 146
EV+++ ++ H ++ L ++ LV E L + + R + + +
Sbjct: 73 LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--VDAAR 130
Query: 147 IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVS 203
I G+ Y H++ KI+HRD+K N+LL+ K + ++ DFGL+ TH
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFE 180
Query: 204 TR-----VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF 252
+GT Y+APE G EK DV+S GV+L L++G P + + +
Sbjct: 181 ASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 16/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + T + + SA L YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYL 121
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H +++RDIK N++LD K+ DFGL K + T GT YLAPE
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVL 177
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQA-EVEIISRVHHKHLVSLVGYY 109
LG+G + V++G VA+K+++ +G EV ++ + H ++V+L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIH 168
LV+E++ + L+ +L G + + +K+ L +GLAY H K++H
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKLTEKS 227
RD+K N+L++ + E K+ADFGLA+ A + T + T Y P+ S + +
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 228 DVFSFGVMLLELITGR 243
D++ G + E+ TGR
Sbjct: 183 DMWGVGCIFYEMATGR 198
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 64
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 119
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ +D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 177 GLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 64
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 119
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ +D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 177 GLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 64
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 119
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ +D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 177 GLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGS-GQGERE-FQAEVEIISRVHHKHLVSLVGY 108
+G+G F V++G+ EVA +L+ + ER+ F+ E E + + H ++V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 109 YTAGSQ----RMLVYEFVPNNTLEFHLH----GKGRPTMDWLTRLKIALGSAKGLAYLHE 160
+ + + +LV E + TL+ +L K + W ++ KGL +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 161 DCHPKIIHRDIKAANILLDFKF-EAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
P IIHRD+K NI + K+ D GLA + + V+GT + APE
Sbjct: 148 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFXAPEXYE 203
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
K E DV++FG LE T P
Sbjct: 204 E-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 24 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 76
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 131
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 132 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 188
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 189 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 77
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 132
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 190 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNGK----EVAIKQLKAG--SGQGEREFQAEVEIISRVHH 99
F+ +LG+G FG V L +VA+K LKA + EF E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 100 KHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLH----GKGRPTMDWLTRLKIAL 149
H+ LVG + M++ F+ + L L G+ + T ++ +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 150 GSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMG 208
A G+ YL IHRD+ A N +L VADFGL+ KI S
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRP 245
+LA E + T SDV++FGV + E++T G+ P
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 59
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 114
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 171
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 172 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 17 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 69
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 124
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 181
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 182 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 17 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 69
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 70 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 124
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 125 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 181
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 182 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 59
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 114
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 171
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 172 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 64
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 65 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 119
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 120 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 177 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 77
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 132
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 190 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 62
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 117
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDF 174
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 175 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 24 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 76
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 131
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 132 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 188
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 189 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + +G G +G V + +G ++A+K+L R
Sbjct: 34 RPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-------R 86
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + + EF N+ L HL G
Sbjct: 87 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATS---LEEF--NDVYLVTHLMGAD 141
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 142 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 198
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + D++S G ++ EL+TGR
Sbjct: 199 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 28 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 80
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 81 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 135
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 136 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 192
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 193 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 63
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 118
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 176 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 16 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 68
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 69 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 123
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 180
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 181 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 62
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 117
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 174
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 175 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGEREFQA--EVEIISRVHHKHLVSLVGY 108
+G+G +G V + E VA+K+++ A E+ ++ + HK++V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 109 YTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
+ + LV+EF + ++ G + + L KGL + H ++H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL--LKGLGFCHSR---NVLH 124
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS- 227
RD+K N+L++ E K+ADFGLA+ A + + + T Y P+ KL S
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 228 DVFSFGVMLLELITGRRPV 246
D++S G + EL RP+
Sbjct: 184 DMWSAGCIFAELANAARPL 202
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 59
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 114
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 171
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 172 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 4 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 56
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 57 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 111
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 112 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 168
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 169 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 53
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 108
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 166 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLK------AGSGQGE 84
STF E++ D + LG G F V + GKE A K +K + G
Sbjct: 3 STFRQEDVE---DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSR 59
Query: 85 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR 144
E + EV I+ + H ++++L + + +L+ E V L L K T D T+
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 145 -LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFGLAKIASDVN 199
LK L G+ YLH +I H D+K NI+L K K+ DFG+A N
Sbjct: 120 FLKQILD---GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ GT ++APE + L ++D++S GV+ L++G P
Sbjct: 174 EF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 63
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 118
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 176 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 16 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 68
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 69 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 123
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 124 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDF 180
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 181 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 2 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 54
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 55 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 109
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 110 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 166
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 167 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 62
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 117
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 174
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 175 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 2 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 54
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 55 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 109
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 110 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 166
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 167 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 62
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 63 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 117
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDF 174
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 175 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 63
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 118
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 176 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK---AGSGQ 82
+ TF +EL + + + + + +G G +G V G VA+K+L
Sbjct: 17 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIH 76
Query: 83 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKGRPTMDW 141
+R ++ E+ ++ + H++++ L+ +T + EF N+ L HL G +
Sbjct: 77 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVK 130
Query: 142 LTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA 195
+L + +GL Y+H IIHRD+K +N+ ++ E K+ DFGLA+
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 196 SDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 188 DDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 53
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 108
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 166 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 3 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 55
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 56 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 110
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 111 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 167
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 168 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 105/267 (39%), Gaps = 82/267 (30%)
Query: 52 LGQGGFGYVHRGVL------PNGKEVAIKQLKAGSGQGE-REFQAEVEIISRV-HHKHLV 103
LG+G FG V + P + VA+K LK G+ E + E++I++ + HH ++V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 104 SLVGYYTA-GSQRMLVYE-----------------FVPNNTLEFHLHGKG---------- 135
+L+G T G M++ E F N H+ K
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 136 -RPTMDWLTR-------------------------------------LKIALGSAKGLAY 157
+P +D +T + + A+G+ +
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 158 LHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV---STRVMGTFGYLA 214
L K IHRD+ A NILL K+ DFGLA+ +V TR+ ++A
Sbjct: 215 LSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--PLKWMA 269
Query: 215 PEYASSGKLTEKSDVFSFGVMLLELIT 241
PE + KSDV+S+GV+L E+ +
Sbjct: 270 PESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 59
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 114
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDF 171
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 172 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K LK + E E ++
Sbjct: 10 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + + D + SA L YL
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYL 124
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H + +++RD+K N++LD K+ DFGL K + GT YLAPE
Sbjct: 125 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKXFCGTPEYLAPEVL 181
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K LK + E E ++
Sbjct: 12 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + + D + SA L YL
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYL 126
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA 218
H + +++RD+K N++LD K+ DFGL K + GT YLAPE
Sbjct: 127 HSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKXFCGTPEYLAPEVL 183
Query: 219 SSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + +G G +G V G VA+K+L R
Sbjct: 15 RPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 67
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 68 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 122
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 123 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 179
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 180 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 12 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + T + + SA L YL
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYL 126
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRVMGTFGYLAPEY 217
H +++RDIK N++LD K+ DFGL K SD T GT YLAPE
Sbjct: 127 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 181
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + T + + SA L YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYL 121
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRVMGTFGYLAPEY 217
H +++RDIK N++LD K+ DFGL K SD T GT YLAPE
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 18/208 (8%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + T + + SA L YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSA--LEYL 121
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRVMGTFGYLAPEY 217
H +++RDIK N++LD K+ DFGL K SD T GT YLAPE
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 46 FSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVH 98
F LLG+G FG V +L G+ A+K L+ + E E ++
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 99 HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
H L +L + + V E+ L FHL + R + R A L YL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYL 121
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRVMGTFGYLAPEY 217
H +++RDIK N++LD K+ DFGL K SD T GT YLAPE
Sbjct: 122 HSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
D + GV++ E++ GR P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHH 99
TD + LG+G F V R + +P G+E A K + K S + ++ + E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
++V L + LV++ V L + + ++ + + + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILESVN 117
Query: 160 EDCHPK-IIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
CH I+HRD+K N+LL K + K+ADFGLA I + GT GYL+P
Sbjct: 118 H-CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSP 175
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRP 245
E + D+++ GV+L L+ G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 28 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 80
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 81 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 135
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 136 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 192
Query: 190 GLAKIASD-VNTHVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D + +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 193 GLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 63
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 64 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 118
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDF 175
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 176 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHH 99
TD + +G+G F V R V L G E A K + K S + ++ + E I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIALGSA 152
++V L + LV++ V L E++ + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------- 114
Query: 153 KGLAYLHEDCHPK-IIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMG 208
A LH CH ++HRD+K N+LL K + K+ADFGLA I + G
Sbjct: 115 ---AVLH--CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAG 168
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T GYL+PE + D+++ GV+L L+ G P
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F +G G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + KVADFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHH 99
TD + LG+G F V R + +P G+E A K + K S + ++ + E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
++V L + LV++ V L + + ++ + + + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILESVN 117
Query: 160 EDCHPK-IIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGYLAP 215
CH I+HRD+K N+LL K + K+ADFGLA I + GT GYL+P
Sbjct: 118 H-CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSP 175
Query: 216 EYASSGKLTEKSDVFSFGVMLLELITGRRP 245
E + D+++ GV+L L+ G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQLK------AGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G F V + GKE A K +K + G E + EV I+ + H ++++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGLAYLHEDCH 163
L + + +L+ E V L L K T D T+ LK L G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLHS--- 126
Query: 164 PKIIHRDIKAANILLDFKF----EAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
+I H D+K NI+L K K+ DFG+A N + GT ++APE +
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVN 184
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
L ++D++S GV+ L++G P
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ D+
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDY 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 39/250 (15%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSG--------QGEREFQ-AEVEI 93
+ + +LG+G V R + P KE A+K + G Q RE EV+I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 94 ISRVH-HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H +++ L Y + LV++ + L +L K T+ KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALL 134
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+ + LH+ I+HRD+K NILLD K+ DFG + D + + V GT Y
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRS-VCGTPSY 189
Query: 213 LAPEYASSGK------LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP--L 264
LAPE ++ D++S GV++ L+ G P W R L
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-------------WHRKQML 236
Query: 265 LNRAIEDGNF 274
+ R I GN+
Sbjct: 237 MLRMIMSGNY 246
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 32/207 (15%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEV---------EIISRVHHKH 101
+G G +G V + +G++VAIK+L R FQ+E+ ++ + H++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 102 LVSLVGYYTAGSQRMLVYEF---VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYL 158
++ L+ +T S Y+F +P + + + + + L + KGL Y+
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM--LKGLKYI 142
Query: 159 HEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRVMGTFGYLAPEY 217
H ++HRD+K N+ ++ E K+ DFGLA+ A +++ +V TR Y APE
Sbjct: 143 HS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEV 194
Query: 218 ASSGK-LTEKSDVFSFGVMLLELITGR 243
S + D++S G ++ E++TG+
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQLK------AGSGQGEREFQAEVEIISRVHHKHLVS 104
LG G F V + GKE A K +K + G E + EV I+ + H ++++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGLAYLHEDCH 163
L + + +L+ E V L L K T D T+ LK L G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL---DGVHYLHS--- 147
Query: 164 PKIIHRDIKAANILLDFKF----EAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS 219
+I H D+K NI+L K K+ DFG+A N + GT ++APE +
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVN 205
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRP 245
L ++D++S GV+ L++G P
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 41/251 (16%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSG--------QGEREFQ-AEVEI 93
+ + +LG+G V R + P KE A+K + G Q RE EV+I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 94 ISRVH-HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H +++ L Y + LV++ + L +L K T+ KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALL 134
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-VMGTFG 211
+ + LH+ I+HRD+K NILLD K+ DFG + ++ R V GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF---SCQLDPGEKLREVCGTPS 188
Query: 212 YLAPEYASSGK------LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP-- 263
YLAPE ++ D++S GV++ L+ G P W R
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-------------WHRKQM 235
Query: 264 LLNRAIEDGNF 274
L+ R I GN+
Sbjct: 236 LMLRMIMSGNY 246
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 77
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 132
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 133 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 189
Query: 190 GLAKIASD-VNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D + V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 190 GLARHTDDEMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQL--KAGSGQGEREFQAEVEIISRVHHKHLVSLVGY 108
LG+G F V R V + G+E A K + K S + ++ + E I + H ++V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 109 YTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
+ L+++ V L E++ + + A LH
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----------AVLH-- 136
Query: 162 CHPK-IIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
CH ++HRD+K N+LL K + K+ADFGLA I + GT GYL+PE
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEV 195
Query: 218 ASSGKLTEKSDVFSFGVMLLELITGRRP 245
+ D+++ GV+L L+ G P
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 41/251 (16%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSG--------QGEREFQ-AEVEI 93
+ + +LG+G V R + P KE A+K + G Q RE EV+I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 94 ISRVH-HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H +++ L Y + LV++ + L +L K T+ KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALL 121
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTR-VMGTFG 211
+ + LH+ I+HRD+K NILLD K+ DFG + ++ R V GT
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF---SCQLDPGEKLREVCGTPS 175
Query: 212 YLAPEYASSGK------LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP-- 263
YLAPE ++ D++S GV++ L+ G P W R
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-------------WHRKQM 222
Query: 264 LLNRAIEDGNF 274
L+ R I GN+
Sbjct: 223 LMLRMIMSGNY 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 43 TDGFSDANLLGQGGFGYV--HRGVLPNGKEVAIKQLKAGSGQGEREFQA---EVEIISRV 97
+D + LG G +G V + L G E AIK +K S A EV ++ ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTL--EFHLHGKGRPTMDWLTRLKIALGSAKGL 155
H +++ L ++ LV E L E L K +D +K L G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF-SEVDAAVIMKQVLS---GT 134
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGY 212
YLH+ I+HRD+K N+LL+ K K+ DFGL+ +V + R +GT Y
Sbjct: 135 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKER-LGTAYY 189
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
+APE K EK DV+S GV+L L+ G P
Sbjct: 190 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 26/240 (10%)
Query: 46 FSDANLLGQGGFGYVHRGVLPNG-KEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS 104
+ D LG GG G V V + K VAIK++ Q + E++II R+ H ++V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 105 L--------------VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
+ VG T + +V E++ + G P ++ RL
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARL-FMYQ 128
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFK-FEAKVADFGLAKIASDVNTHVSTRVMG- 208
+GL Y+H ++HRD+K AN+ ++ + K+ DFGLA+I +H G
Sbjct: 129 LLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 209 -TFGYLAPE-YASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLN 266
T Y +P S T+ D+++ G + E++TG+ H + L+ + P+++
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHH 99
D F LG G FG V + G A+K L +E + E I+ V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIALGSAKGLA 156
LV L + S +V E+ P + HL GR P + +I L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLT----FE 155
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
YLH +I+RD+K N+++D + KV DFGLAK + + GT YLAPE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPE 208
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 43 TDGFSDANLLGQGGFGYV--HRGVLPNGKEVAIKQLKAGSGQGEREFQA---EVEIISRV 97
+D + LG G +G V + L G E AIK +K S A EV ++ ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 98 HHKHLVSLVGYYTAGSQRMLVYEFVPNNTL--EFHLHGKGRPTMDWLTRLKIALGSAKGL 155
H +++ L ++ LV E L E L K +D +K L G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF-SEVDAAVIMKQVLS---GT 117
Query: 156 AYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMGTFGY 212
YLH+ I+HRD+K N+LL+ K K+ DFGL+ +V + R +GT Y
Sbjct: 118 TYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKER-LGTAYY 172
Query: 213 LAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
+APE K EK DV+S GV+L L+ G P
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 38/266 (14%)
Query: 32 STFT----YEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLK---AGSGQGE 84
STFT Y++L G QG VL G VA+K+L +
Sbjct: 16 STFTVLKRYQQLKPIGSG-------AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAK 66
Query: 85 REFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPT 138
R ++ E+ ++ V+HK+++SL+ +T LV E + N +
Sbjct: 67 RAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER 125
Query: 139 MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV 198
M +L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ AS
Sbjct: 126 MSYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS-- 175
Query: 199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV 258
+ T + T Y APE E D++S G ++ EL+ G T D +
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT-----DHID 230
Query: 259 DWARPLLNRAIEDGNFDTLVDPKLHN 284
W + + F + P + N
Sbjct: 231 QWNKVIEQLGTPSAEFMAALQPTVRN 256
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 54/218 (24%)
Query: 52 LGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEV---------EIISRVHHKH 101
+G G +G V + +G++VAIK+L R FQ+E+ ++ + H++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGS---------- 151
++ L+ +T S N +F+L P M T L+ +G
Sbjct: 103 VIGLLDVFTPASSL--------RNFYDFYL---VMPFMQ--TDLQKIMGMEFSEEKIQYL 149
Query: 152 ----AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA-SDVNTHVSTRV 206
KGL Y+H ++HRD+K N+ ++ E K+ DFGLA+ A +++ +V TR
Sbjct: 150 VYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR- 205
Query: 207 MGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
Y APE S + D++S G ++ E++TG+
Sbjct: 206 ----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 52 LGQGGFGYVHRGVLPN-GKEVAIKQLKAGS-GQGER-EFQAEVEIISRVHH-KHLVSLVG 107
LG+G F V + + + G+E A K LK GQ R E E+ ++ +++L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTM----DWLTRLKIALGSAKGLAYLHEDCH 163
Y S+ +L+ E+ + F L M D + +K L +G+ YLH++
Sbjct: 97 VYENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIKQIL---EGVYYLHQN-- 150
Query: 164 PKIIHRDIKAANILLDFKF---EAKVADFGLA-KIASDVNTHVSTRVMGTFGYLAPEYAS 219
I+H D+K NILL + + K+ DFG++ KI +MGT YLAPE +
Sbjct: 151 -NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMGTPEYLAPEILN 206
Query: 220 SGKLTEKSDVFSFGVMLLELITGRRPV---DSTHTFVEDSLVD 259
+T +D+++ G++ L+T P D+ T++ S V+
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN 249
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASD-VNTHVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D + V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 44 DGFSDANLLGQGGFG--YVHRGVL--PNGKEVAIKQLKAGS----GQGEREFQAEVEIIS 95
+ F +LG G +G ++ R + GK A+K LK + + + E +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 96 RVHHK-HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGS-AK 153
+ LV+L + ++ L+ +++ L HL + R T ++I +G
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH---EVQIYVGEIVL 170
Query: 154 GLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYL 213
L +LH+ II+RDIK NILLD + DFGL+K T + GT Y+
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 214 APEYASSGKL--TEKSDVFSFGVMLLELITGRRP 245
AP+ G + D +S GV++ EL+TG P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASD-VNTHVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D + V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F +G G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E++P + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + KVADFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F +G G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E++P + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + KVADFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 85
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIV 144
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 145 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 193
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 85
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 144
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 145 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 193
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 53
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 54 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 108
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 109 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 165
Query: 190 GLAKIASD-VNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGR 243
GLA+ D + V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 166 GLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK V T + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWT-LCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 56 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 107
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 108 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 167 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 216
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
Query: 254 E 254
E
Sbjct: 277 E 277
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 172
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 173 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 221
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGEREFQA--EVEIISRVHHKHLVSLVGY 108
+G+G +G V + E VA+K+++ A E+ ++ + HK++V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 109 YTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIH 168
+ + LV+EF + ++ G + + L KGL + H ++H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL--LKGLGFCHSR---NVLH 124
Query: 169 RDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS- 227
RD+K N+L++ E K+A+FGLA+ A + + + T Y P+ KL S
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 228 DVFSFGVMLLELITGRRPV 246
D++S G + EL RP+
Sbjct: 184 DMWSAGCIFAELANAGRPL 202
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 254 E 254
E
Sbjct: 239 E 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQ---AEVEIISRVHH 99
D F LG G FG V + G A+K L +E + E I+ V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIALGSAKGLA 156
LV L + S +V E+ P + HL GR P + +I L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIVLT----FE 155
Query: 157 YLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
YLH +I+RD+K N+++D + +V DFGLAK + + GT YLAPE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPE 208
Query: 217 YASSGKLTEKSDVFSFGVMLLELITGRRP 245
S + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 78
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+VP + HL GR P + +I
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-QIV 137
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK V T + G
Sbjct: 138 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWT-LCG 186
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
LA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 YLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I V+ LV L + S +V E+ P + HL GR P + +I
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + KVADFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 19 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 70
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 71 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 129
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 130 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 179
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 239
Query: 254 E 254
E
Sbjct: 240 E 240
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ F
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 19 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 70
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 71 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 129
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 130 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 179
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 239
Query: 254 E 254
E
Sbjct: 240 E 240
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 49 ANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQA-EVEIISRVHHKHLVSLV 106
+++LGQG V RG G AIK S + Q E E++ +++HK++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 107 GYY--TAGSQRMLVYEFVPNNTLEFHL----HGKGRPTMDWLTRLKIALGSAKGLAYLHE 160
T ++L+ EF P +L L + G P ++L L+ +G G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLRE 130
Query: 161 DCHPKIIHRDIKAANILL----DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+ I+HR+IK NI+ D + K+ DFG A+ D VS + GT YL P+
Sbjct: 131 N---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPD 185
Query: 217 YASSGKLTE--------KSDVFSFGVMLLELITGRRP 245
L + D++S GV TG P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 56 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 107
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 108 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 166
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 167 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 216
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
Query: 254 E 254
E
Sbjct: 277 E 277
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ DF
Sbjct: 113 LNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDF 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GL + D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 254 E 254
E
Sbjct: 239 E 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 17 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 68
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 69 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 127
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 128 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 177
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 237
Query: 254 E 254
E
Sbjct: 238 E 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT + + +G G G V + VL + VAIK+L +R
Sbjct: 11 STFT------VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 62
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 63 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 121
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 122 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 171
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
Query: 254 E 254
E
Sbjct: 232 E 232
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT + + +G G G V + VL + VAIK+L +R
Sbjct: 12 STFT------VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 63
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 64 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 122
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 123 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 172
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
Query: 254 E 254
E
Sbjct: 233 E 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ D
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDA 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 12 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 63
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 64 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 122
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 123 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 172
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
Query: 254 E 254
E
Sbjct: 233 E 233
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 36 YEELARATDGFSDANLLGQGGFGYV----HRGVLPNGKEVAIKQLKAGSGQGEREFQA-- 89
YE+LA+ +GQG FG V HR G++VA+K++ + + A
Sbjct: 20 YEKLAK----------IGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALR 66
Query: 90 EVEIISRVHHKHLVSLV--------GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW 141
E++I+ + H+++V+L+ Y + LV++F ++ + + T+
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
+ R+ L GL Y+H + KI+HRD+KAAN+L+ K+ADFGLA+ S
Sbjct: 127 IKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 202 VSTRVMG---TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPVDSTHT 251
R T Y PE L E+ D++ G ++ E+ T R P+ +T
Sbjct: 182 QPNRYXNRVVTLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Query: 81 GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMD 140
G E+ +Q E+ I+ ++ H ++V LV ++ L + F L +G P M+
Sbjct: 78 GPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHL--------YMVFELVNQG-PVME 127
Query: 141 WLTRLKIALGSA--------KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA 192
T ++ A KG+ YLH + KIIHRDIK +N+L+ K+ADFG++
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 193 KIASDVNTHVSTRVMGTFGYLAPEYAS------SGKLTEKSDVFSFGVMLLELITGRRP 245
+ +S V GT ++APE S SGK DV++ GV L + G+ P
Sbjct: 185 NEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQCP 239
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT + + +G G G V + VL + VAIK+L +R
Sbjct: 18 STFT------VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 70 AYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 254 E 254
E
Sbjct: 239 E 239
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAIK + A + E+EI+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
+++H ++ + ++ A +V E + L + G R + ++ +A+
Sbjct: 76 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV- 133
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVM 207
YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + +
Sbjct: 134 -----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC 183
Query: 208 GTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
GT YLAPE S D +S GV+L ++G P T V
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 232
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 208 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAIK + A + E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
+++H ++ + ++ A +V E + L + G R + ++ +A+
Sbjct: 70 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV- 127
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVM 207
YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + +
Sbjct: 128 -----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC 177
Query: 208 GTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
GT YLAPE S D +S GV+L ++G P T V
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAIK + A + E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
+++H ++ + ++ A +V E + L + G R + ++ +A+
Sbjct: 70 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV- 127
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVM 207
YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + +
Sbjct: 128 -----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC 177
Query: 208 GTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
GT YLAPE S D +S GV+L ++G P T V
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAIK + A + E+EI+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
+++H ++ + ++ A +V E + L + G R + ++ +A+
Sbjct: 69 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV- 126
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVM 207
YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + +
Sbjct: 127 -----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC 176
Query: 208 GTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
GT YLAPE S D +S GV+L ++G P T V
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAIK + A + E+EI+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR----PTMDWLTRLKIALG 150
+++H ++ + ++ A +V E + L + G R + ++ +A+
Sbjct: 70 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV- 127
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVM 207
YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + +
Sbjct: 128 -----QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC 177
Query: 208 GTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
GT YLAPE S D +S GV+L ++G P T V
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ D
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDR 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 203 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+ P + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + KV DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 210 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 36 YEELARATDGFSDANLLGQGGFGYV----HRGVLPNGKEVAIKQLKAGSGQGEREFQA-- 89
YE+LA+ +GQG FG V HR G++VA+K++ + + A
Sbjct: 20 YEKLAK----------IGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALR 66
Query: 90 EVEIISRVHHKHLVSLV--------GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW 141
E++I+ + H+++V+L+ Y LV++F ++ + + T+
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
+ R+ L GL Y+H + KI+HRD+KAAN+L+ K+ADFGLA+ S
Sbjct: 127 IKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 202 VSTRVMG---TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPVDSTHT 251
R T Y PE L E+ D++ G ++ E+ T R P+ +T
Sbjct: 182 QPNRYXNRVVTLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTHVSTRVMGTF 210
AKG+ +L K IHRD+ A NILL K K+ DFGLA+ I D +
Sbjct: 201 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 211 GYLAPEYASSGKLTEKSDVFSFGVMLLELIT 241
++APE T +SDV+SFGV+L E+ +
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 46 FSDANLLGQGGFG-YVHRGVLPNGKEVAIKQ-LKAGSGQGEREFQAEVEIISRVHHKHLV 103
F ++LG G G V+RG+ N ++VA+K+ L +RE Q + R +H
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFADREVQ-----LLRESDEH-P 78
Query: 104 SLVGYYTAGSQRMLVYEFV--PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED 161
+++ Y+ R Y + TL+ ++ K + L + + + GLA+LH
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLG-LEPITLLQQTTSGLAHLHS- 136
Query: 162 CHPKIIHRDIKAANILLDF-----KFEAKVADFGLAKIASDVNTHVSTR---VMGTFGYL 213
I+HRD+K NIL+ K +A ++DFGL K + V H +R V GT G++
Sbjct: 137 --LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA-VGRHSFSRRSGVPGTEGWI 193
Query: 214 APEYASSG---KLTEKSDVFSFGVMLLELIT 241
APE S T D+FS G + +I+
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 70 AYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 254 E 254
E
Sbjct: 239 E 239
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHK 100
TDG+ +G G + R + E A+K + + +R+ E+EI+ R H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQHP 76
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK---------IALGS 151
++++L Y G +V E + KG +D + R K +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELM-----------KGGELLDKILRQKFFSEREASAVLFTI 125
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFGLAKIASDVNTHVSTRVM 207
K + YLH ++HRD+K +NIL + ++ DFG AK N + T
Sbjct: 126 TKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T ++APE D++S GV+L ++TG P
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 39 LARATDGFSDANLLGQGGFGYVHRGV-LPNGKEVA--IKQLKAGSGQGEREFQAEVEIIS 95
R T+ + LG+G F V R V + G+E A I K S + ++ + E I
Sbjct: 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIA 148
+ H ++V L + L+++ V L E++ + +
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---- 121
Query: 149 LGSAKGLAYLHEDCHPK-IIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVST 204
A LH CH ++HR++K N+LL K + K+ADFGLA I +
Sbjct: 122 -------AVLH--CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWF 171
Query: 205 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT GYL+PE + D+++ GV+L L+ G P
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 31 KSTFTYEELARAT----DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER 85
+ TF +EL + + + + + +G G +G V G VA+K+L R
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------R 57
Query: 86 EFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT-LEFHLHGKG 135
FQ+ E+ ++ + H++++ L+ +T + EF N+ L HL G
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGAD 112
Query: 136 RPTMDWLTRLK------IALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF 189
+ +L + +GL Y+H IIHRD+K +N+ ++ E K+ D
Sbjct: 113 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDG 169
Query: 190 GLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
GLA+ D T +V+TR Y APE + + D++S G ++ EL+TGR
Sbjct: 170 GLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER------EFQAEVEI 93
+ D + LG G F V + G E A K +K + R E + EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H ++++L Y + +L+ E V L +F + + + +K L
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-- 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANI-LLDFKF---EAKVADFGLAKIASDVNTHVSTR-VM 207
G+ YLH KI H D+K NI LLD K+ DFGLA ++ V + +
Sbjct: 127 -GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIF 179
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPA 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)
Query: 51 LLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGEREFQ------AEVEIISRVH----H 99
LLG+GGFG V G L + +VAIK + G EV ++ +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 100 KHLVSLVGYYTAGSQRMLVYE-FVPNNTLEFHLHGKGR----PTMDWLTRLKIALGSAKG 154
++ L+ ++ MLV E +P L ++ KG P+ + ++ A+
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI----- 152
Query: 155 LAYLHEDCHPK-IIHRDIKAANILLDFKF-EAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
+ CH + ++HRDIK NIL+D + AK+ DFG + D T GT Y
Sbjct: 153 -----QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD---EPYTDFDGTRVY 204
Query: 213 LAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSL 257
PE+ S + + V+S G++L +++ G P + +E L
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+ P + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + KV DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAI+ + A + E+EI+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
+++H ++ + ++ A +V E + L + G R L L +
Sbjct: 195 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQM 248
Query: 155 L---AYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMG 208
L YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + + G
Sbjct: 249 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 303
Query: 209 TFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
T YLAPE S D +S GV+L ++G P T V
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 351
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 36 YEELARATDGFSDANLLGQGGFGYV----HRGVLPNGKEVAIKQLKAGSGQGEREFQA-- 89
YE+LA+ +GQG FG V HR G++VA+K++ + + A
Sbjct: 20 YEKLAK----------IGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALR 66
Query: 90 EVEIISRVHHKHLVSLV--------GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW 141
E++I+ + H+++V+L+ Y LV++F ++ + + T+
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 126
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
+ R+ L GL Y+H + KI+HRD+KAAN+L+ K+ADFGLA+ S
Sbjct: 127 IKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 202 VSTRVMG---TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPVDSTHT 251
R T Y PE L E+ D++ G ++ E+ T R P+ +T
Sbjct: 182 QPNRYXNRVVTLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+ P + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + KV DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 36 YEELARATDGFSDANLLGQGGFGYV----HRGVLPNGKEVAIKQLKAGSGQGEREFQA-- 89
YE+LA+ +GQG FG V HR G++VA+K++ + + A
Sbjct: 19 YEKLAK----------IGQGTFGEVFKARHRK---TGQKVALKKVLMENEKEGFPITALR 65
Query: 90 EVEIISRVHHKHLVSLV--------GYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW 141
E++I+ + H+++V+L+ Y LV++F ++ + + T+
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 125
Query: 142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH 201
+ R+ L GL Y+H + KI+HRD+KAAN+L+ K+ADFGLA+ S
Sbjct: 126 IKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 202 VSTRVMG---TFGYLAPEYASSGKLTEKS-----DVFSFGVMLLELITGRRPVDSTHT 251
R T Y PE L E+ D++ G ++ E+ T R P+ +T
Sbjct: 181 QPNRYXNRVVTLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 233
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 44 DGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLK--------AGSGQGEREFQAEVEII 94
D + + LG G G V K+VAI+ + A + E+EI+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 95 SRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKG 154
+++H ++ + ++ A +V E + L + G R L L +
Sbjct: 209 KKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQM 262
Query: 155 L---AYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTRVMG 208
L YLHE+ IIHRD+K N+LL + E K+ DFG +KI + T + + G
Sbjct: 263 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 317
Query: 209 TFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV 253
T YLAPE S D +S GV+L ++G P T V
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 365
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG+GGF YV L +G A+K++ Q E Q E ++ +H +++ LV Y
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 111 ----AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR---LKIALGSAKGLAYLHEDCH 163
A + L+ F TL + + + ++LT L + LG +GL +H +
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY 155
Query: 164 PKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVM---------GTFGYLA 214
HRD+K NILL + + + D G A ++ S + + T Y A
Sbjct: 156 A---HRDLKPTNILLGDEGQPVLMDLGSMNQAC-IHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 215 PEY---ASSGKLTEKSDVFSFGVMLLELITGRRPVD 247
PE S + E++DV+S G +L ++ G P D
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 70 AYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLX-----GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 254 E 254
E
Sbjct: 239 E 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 39 LARATDGFSDANLLGQGGFGYVHRGV--LPNGKEVA-IKQLKAGSGQGEREFQAEVEIIS 95
R TD + LG+G F V R V P + A I K S + ++ + E I
Sbjct: 26 CTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICR 85
Query: 96 RVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-------EFHLHGKGRPTMDWLTRLKIA 148
+ H ++V L + LV++ V L E++ + +
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL----- 140
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTHVSTR 205
+ + ++H+ I+HRD+K N+LL K + K+ADFGLA I
Sbjct: 141 ----ESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFG 192
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT GYL+PE + D+++ GV+L L+ G P
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 37/243 (15%)
Query: 36 YEELARATDG-------FSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGERE-- 86
YE++ + G + ++G+G FG V ++V +L + +R
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 87 --FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW--- 141
F E +I++ + +V L + +V E++P L + P W
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-KWAKF 178
Query: 142 -LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVN 199
+ +AL + + +IHRD+K N+LLD K+ADFG K+
Sbjct: 179 YTAEVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 200 THVSTRVMGTFGYLAPEYASS----GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED 255
H T V GT Y++PE S G + D +S GV L E++ G P F D
Sbjct: 230 VHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP------FYAD 282
Query: 256 SLV 258
SLV
Sbjct: 283 SLV 285
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 49 ANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQA-EVEIISRVHHKHLVSLV 106
+++LGQG V RG G AIK S + Q E E++ +++HK++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 107 GYY--TAGSQRMLVYEFVPNNTLEFHL----HGKGRPTMDWLTRLKIALGSAKGLAYLHE 160
T ++L+ EF P +L L + G P ++L L+ +G G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLRE 130
Query: 161 DCHPKIIHRDIKAANILL----DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE 216
+ I+HR+IK NI+ D + K+ DFG A+ D V + GT YL P+
Sbjct: 131 N---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPD 185
Query: 217 YASSGKLTE--------KSDVFSFGVMLLELITGRRP 245
L + D++S GV TG P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + VL + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLX-----GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 254 E 254
E
Sbjct: 239 E 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 172
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 173 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCG 221
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT + + +G G G V + VL + VAIK+L +R
Sbjct: 11 STFT------VLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKR 62
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++SL+ +T LV E + N + M
Sbjct: 63 AYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM 121
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 122 SYLLYQMLX-----GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--T 171
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELI------TGRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
Query: 254 E 254
E
Sbjct: 232 E 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 38/220 (17%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHK 100
+DG+ +G G + R V E A+K + + +R+ E+EI+ R H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHP 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK---------IALGS 151
++++L Y G LV E + +G +D + R K +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELM-----------RGGELLDKILRQKFFSEREASFVLHTI 130
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA------KVADFGLAKIASDVNTHVSTR 205
K + YLH ++HRD+K +NIL + E+ ++ DFG AK N + T
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNIL--YVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T ++APE E D++S G++L ++ G P
Sbjct: 186 CY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 126
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 181
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 38/220 (17%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHK 100
+DG+ +G G + R V E A+K + + +R+ E+EI+ R H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHP 81
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK---------IALGS 151
++++L Y G LV E + +G +D + R K +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELM-----------RGGELLDKILRQKFFSEREASFVLHTI 130
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA------KVADFGLAKIASDVNTHVSTR 205
K + YLH ++HRD+K +NIL + E+ ++ DFG AK N + T
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNIL--YVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T ++APE E D++S G++L ++ G P
Sbjct: 186 CY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGER------EFQAEVEI 93
+ D + LG G F V + G E A K +K + R E + EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H ++++L Y + +L+ E V L +F + + + +K L
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-- 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANI-LLDFKF---EAKVADFGLAKIASDVNTHVSTR-VM 207
G+ YLH KI H D+K NI LLD K+ DFGLA ++ V + +
Sbjct: 127 -GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIF 179
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 126
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 181
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 RATDGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGER------EFQAEVEI 93
+ D + LG G F V + G E A K +K + R E + EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H ++++L Y + +L+ E V L +F + + + +K L
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-- 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANI-LLDFKF---EAKVADFGLAKIASDVNTHVSTR-VM 207
G+ YLH KI H D+K NI LLD K+ DFGLA ++ V + +
Sbjct: 127 -GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIF 179
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 RATDGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGER------EFQAEVEI 93
+ D + LG G F V + G E A K +K + R E + EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H ++++L Y + +L+ E V L +F + + + +K L
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-- 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANI-LLDFKF---EAKVADFGLAKIASDVNTHVSTR-VM 207
G+ YLH KI H D+K NI LLD K+ DFGLA ++ V + +
Sbjct: 127 -GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIF 179
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 RATDGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGER------EFQAEVEI 93
+ D + LG G F V + G E A K +K + R E + EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H ++++L Y + +L+ E V L +F + + + +K L
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-- 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANI-LLDFKF---EAKVADFGLAKIASDVNTHVSTR-VM 207
G+ YLH KI H D+K NI LLD K+ DFGLA ++ V + +
Sbjct: 127 -GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIF 179
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 34/218 (15%)
Query: 43 TDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHK 100
TDG+ +G G + R + E A+K + + +R+ E+EI+ R H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIID----KSKRDPTEEIEILLRYGQHP 76
Query: 101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLK---------IALGS 151
++++L Y G +V E KG +D + R K +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELX-----------KGGELLDKILRQKFFSEREASAVLFTI 125
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFGLAKIASDVNTHVSTRVM 207
K + YLH ++HRD+K +NIL + ++ DFG AK N + T
Sbjct: 126 TKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T ++APE D++S GV+L +TG P
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQA--EVEIISRVHHKHLVSLVGY 108
+G+G +G V + G+ VAIK+ + A E+ ++ ++ H +LV+L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 109 YTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE-DCHPKI 166
+ + LV+E+ + L E + +G P + L + I + + + + H+ +C
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVP--EHLVK-SITWQTLQAVNFCHKHNC---- 123
Query: 167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPE-YASSGKLTE 225
IHRD+K NIL+ K+ DFG A++ + + + V T Y +PE +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGP 182
Query: 226 KSDVFSFGVMLLELITG 242
DV++ G + EL++G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 41 RATDGFSDANLLGQGGFGYVHRG-VLPNGKEVAIKQLKAGSGQGER------EFQAEVEI 93
+ D + LG G F V + G E A K +K + R E + EV I
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL-EFHLHGKGRPTMDWLTRLKIALGSA 152
+ +V H ++++L Y + +L+ E V L +F + + + +K L
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD-- 126
Query: 153 KGLAYLHEDCHPKIIHRDIKAANI-LLDFKF---EAKVADFGLAKIASDVNTHVSTR-VM 207
G+ YLH KI H D+K NI LLD K+ DFGLA ++ V + +
Sbjct: 127 -GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIF 179
Query: 208 GTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
GT ++APE + L ++D++S GV+ L++G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 41 RATDGFSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHH 99
+ D F + GQG FG V G G VAIK++ RE Q ++ ++ +HH
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHH 78
Query: 100 KHLVSLVGY-YTAGSQRM------LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGS- 151
++V L Y YT G + +V E+VP+ + R +K+ L
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 152 AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA----KVADFGLAKIASDVNTHVSTRVM 207
+ + LH + HRDIK N+L++ EA K+ DFG AK S +V+ +
Sbjct: 139 IRSIGCLHLP-SVNVCHRDIKPHNVLVN---EADGTLKLCDFGSAKKLSPSEPNVA--YI 192
Query: 208 GTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITG 242
+ Y APE + T D++S G + E++ G
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+ P + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 106/266 (39%), Gaps = 38/266 (14%)
Query: 32 STFT----YEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLK---AGSGQGE 84
STFT Y++L G QG VL G VA+K+L +
Sbjct: 18 STFTVLKRYQQLKPIGSG-------AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAK 68
Query: 85 REFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPT 138
R ++ E+ ++ V+HK+++SL+ +T LV E + N +
Sbjct: 69 RAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER 127
Query: 139 MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV 198
M +L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 128 MSYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC-- 177
Query: 199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV 258
+ T + T Y APE D++S G ++ EL+ G T D +
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT-----DHID 232
Query: 259 DWARPLLNRAIEDGNFDTLVDPKLHN 284
W + + F + P + N
Sbjct: 233 QWNKVIEQLGTPSAEFMAALQPTVRN 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 19 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 70
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 71 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 129
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 130 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 179
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 42 ATDGFS---------DANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEV 91
+TD FS ++LG+G V + L +E A+K ++ G EV
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 92 EIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
E++ + H++++ L+ ++ + LV+E + ++ H+H R + L +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQD 119
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLA---KIASDVNTHVST 204
A L +LH + I HRD+K NIL + + K+ DFGL K+ D + +
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 205 RVMGTFG---YLAPE----YASSGKLTEK-SDVFSFGVMLLELITGRRP 245
++ G Y+APE ++ + +K D++S GV+L L++G P
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 87
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 88 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-QIV 146
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 147 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 195
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ L L + S +V E+ P + HL GR P + +I
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + KV DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGYYT 110
LG+G F + V + K +K S + E Q E+ + H ++V L +
Sbjct: 19 LGEGSFSICRKCV--HKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
LV E + L + K + + + L SA ++++H+ ++HRD
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA--VSHMHD---VGVVHRD 131
Query: 171 IKAANILL---DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
+K N+L + E K+ DFG A++ N + T T Y APE + E
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESC 190
Query: 228 DVFSFGVMLLELITGRRPVDS 248
D++S GV+L +++G+ P S
Sbjct: 191 DLWSLGVILYTMLSGQVPFQS 211
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ L L + S +V E+ P + HL GR P + +I
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + KV DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ L L + S +V E+ P + HL GR P + +I
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA-QIV 152
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + KV DFG AK + + G
Sbjct: 153 LT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCG 201
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK ++ G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA----G 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-QIV 172
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 173 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 221
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 168 HRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKS 227
HRD+K NIL+ A + DFG+A +D +GT Y APE S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 228 DVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP 263
D+++ +L E +TG P V + ++ A P
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIP 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 79
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 80 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 138
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 139 LT----FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG----RTWXLCG 187
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLXG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 30/234 (12%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGERE----FQAEVEI 93
+L + + ++G+G FG V + ++V +L + +R F E +I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW----LTRLKIAL 149
++ + +V L + +V E++P L + P W + +AL
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLAL 186
Query: 150 GSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMG 208
+ + + IHRD+K N+LLD K+ADFG K+ + T V G
Sbjct: 187 DAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 209 TFGYLAPEYASS----GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV 258
T Y++PE S G + D +S GV L E++ G P F DSLV
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP------FYADSLV 284
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 30/234 (12%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGERE----FQAEVEI 93
+L + + ++G+G FG V + ++V +L + +R F E +I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW----LTRLKIAL 149
++ + +V L + +V E++P L + P W + +AL
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLAL 181
Query: 150 GSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMG 208
+ + + IHRD+K N+LLD K+ADFG K+ + T V G
Sbjct: 182 DAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 231
Query: 209 TFGYLAPEYASS----GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV 258
T Y++PE S G + D +S GV L E++ G P F DSLV
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP------FYADSLV 279
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 44 DGFSDANLLGQGGFGYVHR------GVLPNGKEVAIKQLKAGS-GQGEREFQAEVEIISR 96
D + LG G F V + G+ K + ++ K+ G + + EV I+
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR-LKIALGSAKGL 155
+ H ++++L Y + +L+ E V L L K T + T LK L G+
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN---GV 127
Query: 156 AYLHEDCHPKIIHRDIKAANI-LLDF---KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
YLH +I H D+K NI LLD K K+ DFGLA N + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 212 YLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
++APE + L ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYVH------------RGVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V +L K V +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+++D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 30/234 (12%)
Query: 38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGERE----FQAEVEI 93
+L + + ++G+G FG V + ++V +L + +R F E +I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 94 ISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW----LTRLKIAL 149
++ + +V L + +V E++P L + P W + +AL
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE-KWARFYTAEVVLAL 186
Query: 150 GSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA-KIASDVNTHVSTRVMG 208
+ + + IHRD+K N+LLD K+ADFG K+ + T V G
Sbjct: 187 DAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 209 TFGYLAPEYASS----GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV 258
T Y++PE S G + D +S GV L E++ G P F DSLV
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP------FYADSLV 284
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLV-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S GV++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLV-----GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S GV++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAPE S + D ++ GV++ ++ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 20 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 71
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 72 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 130
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 131 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 180
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + + T Y APE E D++S G ++ E+I G
Sbjct: 181 SFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 23 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 74
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 75 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 133
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 134 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 183
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 184 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 243
Query: 254 E 254
E
Sbjct: 244 E 244
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA 111
LG+G FG VHR V + K+ + + G + + E+ I++ H++++ L + +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHP------- 164
+ ++++EF+ G + + L + ++Y+H+ C
Sbjct: 73 MEELVMIFEFIS-----------GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 165 KIIHRDIKAANILLDFKFEA--KVADFGLAKIASDVNTHVSTRVMGTF-GYLAPEYASSG 221
I H DI+ NI+ + + K+ +FG A+ + + R++ T Y APE
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 222 KLTEKSDVFSFGVMLLELITGRRP 245
++ +D++S G ++ L++G P
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 12 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 63
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 64 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 122
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 123 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 172
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDSTHTFV 253
+ + T + T Y APE E D++S G ++ E++ GR +D + +
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 232
Query: 254 E 254
E
Sbjct: 233 E 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG+G FG VHR G + A+K+++ + E E+ + + +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIHR 169
G + E + +L + +G D R LG A +GL YLH +I+H
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLHSR---RILHG 190
Query: 170 DIKAANILLDFK-FEAKVADFGLA------KIASDVNTHVSTRVMGTFGYLAPEYASSGK 222
D+KA N+LL A + DFG A + D+ T + GT ++APE
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT--GDYIPGTETHMAPEVVLGRS 248
Query: 223 LTEKSDVFSFGVMLLELITGRRP 245
K DV+S M+L ++ G P
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T YLAP S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 83 GEREFQAEVEIISRVHHKHLVSLVG-YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDW 141
GE + E++++ R+ HK+++ LV Y Q+M + +E+ + G + +D
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM-------VMEYCVCGM-QEMLDS 100
Query: 142 LTRLKIALGSA--------KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK 193
+ + + A GL YLH I+H+DIK N+LL K++ G+A+
Sbjct: 101 VPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 194 IASDVNTHVSTRV-MGTFGYLAPEYASSGKLTE--KSDVFSFGVMLLELITGRRPVDSTH 250
+ R G+ + PE A+ K D++S GV L + TG P + +
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
Query: 251 TF 252
+
Sbjct: 218 IY 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 42 ATDGFS---------DANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEV 91
+TD FS ++LG+G V + L +E A+K ++ G EV
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 92 EIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALG 150
E++ + H++++ L+ ++ + LV+E + ++ H+H R + L +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQD 119
Query: 151 SAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLA---KIASDVNTHVST 204
A L +LH + I HRD+K NIL + + K+ DF L K+ D + +
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 205 RVMGTFG---YLAPE----YASSGKLTEK-SDVFSFGVMLLELITGRRP 245
++ G Y+APE ++ + +K D++S GV+L L++G P
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAG------SQRMLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN 199
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLV-----GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--T 178
Query: 200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITG 242
+ + T + T Y APE E D++S G ++ E+I G
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 20/222 (9%)
Query: 38 ELARATDGFS-DANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQG-EREFQAEVEIIS 95
E R D F + +G+G +G+V++ +GK+ LK G G E+ ++
Sbjct: 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLR 73
Query: 96 RVHHKHLVSLVGYYTAGSQR--MLVYEFVPNN---TLEFHLHGKGRPTMDWLTR--LKIA 148
+ H +++SL + + + R L++++ ++ ++FH K L R +K
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 149 LGSA-KGLAYLHEDCHPKIIHRDIKAANILL----DFKFEAKVADFGLAKIASDVNTHVS 203
L G+ YLH + ++HRD+K ANIL+ + K+AD G A++ + ++
Sbjct: 134 LYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 190
Query: 204 --TRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITG 242
V+ TF Y APE + T+ D+++ G + EL+T
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD-- 197
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180
Query: 198 -VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDSTH 250
+ V TR Y APE E D++S G ++ E++ GR +D +
Sbjct: 181 MMEPEVVTRY-----YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 251 TFVE 254
+E
Sbjct: 236 KVIE 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFG 211
+GL Y+H IIHRD+K +N+ ++ E ++ DFGLA+ A + T +V+TR
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 212 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
Y APE + + D++S G ++ EL+ G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 68/282 (24%)
Query: 52 LGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREF--------QAEVEIISRVHHKHLV 103
+GQG +G V + + AI+ +K + R+ + EV ++ ++HH ++
Sbjct: 34 IGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 104 SLVGYYTAGSQRMLVYE-------------FVPNNT----------------------LE 128
L Y LV E F+ ++T +
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 129 FHLHGKGRPTMDWLTRLKIALGSAK----GLAYLHEDCHPKIIHRDIKAANILL--DFKF 182
+HG R ++D++ R K+ + L YLH I HRDIK N L + F
Sbjct: 152 GSIHG-FRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSF 207
Query: 183 EAKVADFGLAKIASDVNT---HVSTRVMGTFGYLAPEYASSGKLT--EKSDVFSFGVMLL 237
E K+ DFGL+K +N + T GT ++APE ++ + K D +S GV+L
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 238 ELITGRRPVDSTHTFVEDSLVDWARPLLNR--AIEDGNFDTL 277
L+ G P V D+ D +LN+ E+ N++ L
Sbjct: 268 LLLMGAVPFPG----VNDA--DTISQVLNKKLCFENPNYNVL 303
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG+G FG VHR G + A+K+++ + E E+ + + +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIHR 169
G + E + +L + +G D R LG A +GL YLH +I+H
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLHSR---RILHG 209
Query: 170 DIKAANILLDFK-FEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAPEYASSGKLT 224
D+KA N+LL A + DFG A S + GT ++APE
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 225 EKSDVFSFGVMLLELITGRRP 245
K DV+S M+L ++ G P
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP 290
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGT 209
+GL Y+H ++IHRD+K +N+L++ E K+ DFG+A+ + + + T + T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 210 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRR 244
Y APE S + T+ D++S G + E++ R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFG 211
+GL Y+H IIHRD+K +N+ ++ E ++ DFGLA+ A + T +V+TR
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 212 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
Y APE + + D++S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFG 211
+GL Y+H IIHRD+K +N+ ++ E ++ DFGLA+ A + T +V+TR
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 212 YLAPEYASSGK-LTEKSDVFSFGVMLLELITGR 243
Y APE + + D++S G ++ EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK---IASDVNTHVSTRVMGT 209
+GL Y+H ++IHRD+K +N+L++ E K+ DFG+A+ + + + T + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 210 FGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRR 244
Y APE S + T+ D++S G + E++ R+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 32 STFTYEELARATDGFSDANLLGQGGFGYV---HRGVLPNGKEVAIKQLK---AGSGQGER 85
STFT L R + + +G G G V + +L + VAIK+L +R
Sbjct: 18 STFTV--LKR----YQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKR 69
Query: 86 EFQAEVEIISRVHHKHLVSLVGYYTAGSQR------MLVYEFVPNNTLEFHLHGKGRPTM 139
++ E+ ++ V+HK+++ L+ +T +V E + N + M
Sbjct: 70 AYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM 128
Query: 140 DWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD-- 197
+L + G+ +LH IIHRD+K +NI++ K+ DFGLA+ A
Sbjct: 129 SYLLYQMLC-----GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180
Query: 198 -VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT------GRRPVDSTH 250
+ V TR Y APE E D++S G ++ E++ GR +D +
Sbjct: 181 MMEPEVVTRY-----YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWN 235
Query: 251 TFVE 254
+E
Sbjct: 236 KVIE 239
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 28/125 (22%)
Query: 140 DWLTR------------LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVA 187
DW+ R L I + A+ + +LH ++HRD+K +NI KV
Sbjct: 150 DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 206
Query: 188 DFGLAKIASDVNTHVSTRV------------MGTFGYLAPEYASSGKLTEKSDVFSFGVM 235
DFGL A D + T + +GT Y++PE + K D+FS G++
Sbjct: 207 DFGLVT-AMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI 265
Query: 236 LLELI 240
L EL+
Sbjct: 266 LFELL 270
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 44 DGFSDANLLGQGGFGYV----HR--------GVLPNGKEVAIKQLKAGSGQGEREFQAEV 91
D F LG G FG V H+ +L K V +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 92 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGR---PTMDWLTRLKIA 148
I+ V+ LV L + S +V E+V + HL GR P + +I
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-QIV 151
Query: 149 LGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 208
L YLH +I+RD+K N+L+D + +V DFG AK + + G
Sbjct: 152 LT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCG 200
Query: 209 TFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP 245
T LAPE S + D ++ GV++ E+ G P
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 51 LLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
L+G+G FG V+ G + + ++ + + F+ EV + H+++V +G
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD 170
+ ++ TL + + + +D +IA KG+ YLH I+H+D
Sbjct: 100 SPPHLAIITSLCKGRTL-YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKD 155
Query: 171 IKAANILLDFKFEAKVADFGLAKIASDVNT---HVSTRVM-GTFGYLAPEY-------AS 219
+K+ N+ D + + DFGL I+ + R+ G +LAPE
Sbjct: 156 LKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 220 SGKL--TEKSDVFSFGVMLLEL 239
KL ++ SDVF+ G + EL
Sbjct: 215 EDKLPFSKHSDVFALGTIWYEL 236
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 76 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 122
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 179
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 118 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 164
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 221
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 75 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 121
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 178
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 76 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 122
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 179
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 90 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 136
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 193
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 102 LVSLVGYYTAGSQRMLVYEFV-PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE 160
++ L+ ++ +L+ E + P L D++T + AL ++ +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDL-----------FDFITE-RGALQEELARSFFWQ 122
Query: 161 ------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFGY 212
CH ++HRDIK NIL+D + E K+ DFG + D V T GT Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 179
Query: 213 LAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
PE+ + +S V+S G++L +++ G P +
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 90 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 136
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 193
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 91 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 137
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 194
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 103 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 149
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 206
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 104 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 150
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 207
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 71 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 117
Query: 160 E------DCHPK-IIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 174
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 91 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 137
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 194
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 104 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 150
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 207
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 103 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 149
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 206
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 103 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 149
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 206
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 74 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 120
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 177
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 104 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 150
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 207
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 103 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 149
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 206
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 76 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 122
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 179
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 104 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 150
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 207
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 110 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 156
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 213
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 74 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 133
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 134 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 189
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 190 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 237
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 66 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 125
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 126 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 181
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 182 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 71 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 117
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 174
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 71 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 117
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 174
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 91 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 137
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 194
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 89/231 (38%), Gaps = 34/231 (14%)
Query: 46 FSDANLLGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQ--------AEVEIISR 96
+S + LG G FG+V V KEV +K +K + + E+ I+SR
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWL---TRLKIALGS-- 151
V H +++ ++ + LV E HG G ++ RL L S
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVME----------KHGSGLDLFAFIDRHPRLDEPLASYI 135
Query: 152 ----AKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVM 207
+ YL IIHRDIK NI++ F K+ DFG A +
Sbjct: 136 FRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE--RGKLFYTFC 190
Query: 208 GTFGYLAPEYASSGKLT-EKSDVFSFGVMLLELITGRRPVDSTHTFVEDSL 257
GT Y APE + +++S GV L L+ P VE ++
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI 241
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 98 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 144
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 201
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 118 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 164
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 221
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 117
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 118 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 173
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
T T Y+APE K + D++S GV++ L+ G P S H
Sbjct: 174 -LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 51 LLGQGGFGYVHRGV-LPNGKEVAIKQLKAG--SGQGE----REFQAEVEIISRVH--HKH 101
LLG GGFG V+ G+ + + VAIK ++ S GE EV ++ +V
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 102 LVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRL--KIALGSAKGLAYLH 159
++ L+ ++ +L+ E + P D + + AL ++
Sbjct: 123 VIRLLDWFERPDSFVLILE-------------RPEPVQDLFDFITERGALQEELARSFFW 169
Query: 160 E------DCH-PKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNTHVSTRVMGTFG 211
+ CH ++HRDIK NIL+D + E K+ DFG + D V T GT
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRV 226
Query: 212 YLAPEYASSGKLTEKS-DVFSFGVMLLELITGRRPVD 247
Y PE+ + +S V+S G++L +++ G P +
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 64 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 123
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 124 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 179
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
T T Y+APE K + D++S GV++ L+ G P S H
Sbjct: 180 -LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 43 TDGFSDANLLGQGGFGYVHRGVLPNGKE-VAIKQLKAGSGQGEREFQAEVEIISR--VHH 99
+D + +G G FG KE VA+K ++ G+ E + EII+ + H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE---NVQREIINHRSLRH 75
Query: 100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH 159
++V + ++ E+ L + GR + D L S G++Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS--GVSYCH 133
Query: 160 EDCHPKIIHRDIKAANILLD--FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEY 217
+I HRD+K N LLD K+ DFG +K S V +GT Y+APE
Sbjct: 134 SM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPAYIAPEV 188
Query: 218 ASSGKLTEK-SDVFSFGVMLLELITGRRP 245
+ K +DV+S GV L ++ G P
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 65 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 124
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 125 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 180
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 181 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 228
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 110 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 169
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 170 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 225
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 226 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 273
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 163
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 164 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 219
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 220 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 120 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 175
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 176 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 117
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 118 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 173
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 174 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
LG+G FG VHR G + A+K+++ + E E+ + + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVR 134
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIHR 169
G + E + +L + G D R LG A +GL YLH +I+H
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPED---RALYYLGQALEGLEYLHTR---RILHG 188
Query: 170 DIKAANILLDFK-FEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAPEYASSGKLT 224
D+KA N+LL A + DFG A S + GT ++APE
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 225 EKSDVFSFGVMLLELITGRRP 245
K D++S M+L ++ G P
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHP 269
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 120 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 175
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 176 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 90 EVEIISRVHH-KHLVSLVGYYT---AGSQRML-VYEFVPNNTLEFHLHGKGRPTMDWLTR 144
EVE+ R H+V +V Y AG + +L V E + L + +G
Sbjct: 59 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 118
Query: 145 LKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIASDVNTH 201
+I + + YLH I HRD+K N+L K K+ DFG AK + N+
Sbjct: 119 SEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS- 174
Query: 202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH 250
++T + Y+APE K + D++S GV++ L+ G P S H
Sbjct: 175 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 40 ARATDGFSDANLLGQGGFGYVHRGVLPNG-KEVAIKQLKAGSGQ--GEREFQAEVEIISR 96
+ D + +L+G+G +GYV+ N K VAIK++ + E+ I++R
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 97 VHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEF-HLH----------GKGRPTMDWLTRL 145
+ +++ L +P + L+F L+ K T +LT
Sbjct: 84 LKSDYIIRLHDL------------IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQ 131
Query: 146 ---KIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK-IASDVNTH 201
I G ++HE IIHRD+K AN LL+ K+ DFGLA+ I SD + H
Sbjct: 132 HVKTILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
Query: 202 V 202
+
Sbjct: 189 I 189
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 81/201 (40%), Gaps = 50/201 (24%)
Query: 62 RGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF 121
R VL NG I QL FQ E +L ++ YY G L+ +F
Sbjct: 112 RDVLVNGDRRWITQLHFA-------FQDE---------NYLYLVMEYYVGGDLLTLLSKF 155
Query: 122 ---VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL 178
+P F+L + +A+ S L Y +HRDIK NILL
Sbjct: 156 GERIPAEMARFYL-----------AEIVMAIDSVHRLGY---------VHRDIKPDNILL 195
Query: 179 DFKFEAKVADFG-LAKIASDVNTHVSTRVMGTFGYLAPEYASS-------GKLTEKSDVF 230
D ++ADFG K+ +D T S +GT YL+PE + G + D +
Sbjct: 196 DRCGHIRLADFGSCLKLRAD-GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 231 SFGVMLLELITGRRP--VDST 249
+ GV E+ G+ P DST
Sbjct: 255 ALGVFAYEMFYGQTPFYADST 275
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 24/223 (10%)
Query: 35 TYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQ--LKAGSGQGEREFQAEVE 92
YE L GF D + + P G+ V +++ L+A S + Q E+
Sbjct: 26 CYELLTVIGKGFEDLMTVNLARYK-------PTGEYVTVRRINLEACSNEMVTFLQGELH 78
Query: 93 IISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+ +H ++V + A ++ +V F+ + + + M+ L I G
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF-- 210
K L Y+H H +HR +KA++IL+ + KV GL S ++ RV+ F
Sbjct: 139 KALDYIH---HMGYVHRSVKASHILI--SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 193
Query: 211 ------GYLAPEYASSG--KLTEKSDVFSFGVMLLELITGRRP 245
+L+PE KSD++S G+ EL G P
Sbjct: 194 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 24/223 (10%)
Query: 35 TYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQ--LKAGSGQGEREFQAEVE 92
YE L GF D + + P G+ V +++ L+A S + Q E+
Sbjct: 10 CYELLTVIGKGFEDLMTVNLARYK-------PTGEYVTVRRINLEACSNEMVTFLQGELH 62
Query: 93 IISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA 152
+ +H ++V + A ++ +V F+ + + + M+ L I G
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 122
Query: 153 KGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTF-- 210
K L Y+H H +HR +KA++IL+ + KV GL S ++ RV+ F
Sbjct: 123 KALDYIH---HMGYVHRSVKASHILI--SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPK 177
Query: 211 ------GYLAPEYASSG--KLTEKSDVFSFGVMLLELITGRRP 245
+L+PE KSD++S G+ EL G P
Sbjct: 178 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT 110
+G+G FG VHR G + A+K+++ + E E+ + + +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVR 120
Query: 111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSA-KGLAYLHEDCHPKIIHR 169
G + E + +L + G D R LG A +GL YLH +I+H
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPED---RALYYLGQALEGLEYLHTR---RILHG 174
Query: 170 DIKAANILLDFK-FEAKVADFGLAKIASDVNTHVSTR----VMGTFGYLAPEYASSGKLT 224
D+KA N+LL A + DFG A S + GT ++APE
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 225 EKSDVFSFGVMLLELITGRRP 245
K D++S M+L ++ G P
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHP 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,141,197
Number of Sequences: 62578
Number of extensions: 443109
Number of successful extensions: 3448
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 1168
Number of HSP's gapped (non-prelim): 1134
length of query: 416
length of database: 14,973,337
effective HSP length: 101
effective length of query: 315
effective length of database: 8,652,959
effective search space: 2725682085
effective search space used: 2725682085
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)