Query         014904
Match_columns 416
No_of_seqs    342 out of 2468
Neff          8.2 
Searched_HMMs 29240
Date          Mon Mar 25 03:12:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014904.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014904hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 5.1E-56 1.8E-60  429.3  19.5  256   44-322    13-287 (299)
  2 4aoj_A High affinity nerve gro 100.0 1.7E-55   6E-60  431.1  22.9  256   44-322    41-317 (329)
  3 4gt4_A Tyrosine-protein kinase 100.0 6.1E-56 2.1E-60  430.5  17.8  254   45-321    27-303 (308)
  4 3omv_A RAF proto-oncogene seri 100.0 2.2E-54 7.4E-59  418.7  25.8  257   43-321    35-297 (307)
  5 4b9d_A Serine/threonine-protei 100.0 4.8E-54 1.6E-58  422.6  21.4  251   43-317    23-276 (350)
  6 4fih_A Serine/threonine-protei 100.0 2.7E-53 9.2E-58  416.7  23.9  249   44-317    74-323 (346)
  7 3hmm_A TGF-beta receptor type- 100.0 7.6E-54 2.6E-58  415.3  17.4  270   44-322     3-295 (303)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.6E-53 8.7E-58  411.0  19.0  247   44-316    32-283 (311)
  9 4fie_A Serine/threonine-protei 100.0 3.9E-52 1.3E-56  418.2  25.6  249   44-317   151-400 (423)
 10 4g3f_A NF-kappa-beta-inducing  100.0 7.4E-53 2.5E-57  412.2  19.8  252   42-321    56-313 (336)
 11 4ase_A Vascular endothelial gr 100.0 8.7E-53   3E-57  415.5  17.8  264   37-322    57-345 (353)
 12 3fpq_A Serine/threonine-protei 100.0 1.8E-52 6.3E-57  402.3  19.1  244   47-317    29-282 (290)
 13 3hyh_A Carbon catabolite-derep 100.0 1.5E-51 5.1E-56  392.9  22.8  245   44-317    13-262 (275)
 14 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-51 4.8E-56  398.3  14.6  242   44-312    24-271 (304)
 15 3uim_A Brassinosteroid insensi 100.0 9.1E-50 3.1E-54  388.4  22.4  290   31-324    17-311 (326)
 16 2qkw_B Protein kinase; three-h 100.0 1.6E-49 5.5E-54  386.3  23.5  286   31-323    26-314 (321)
 17 4g31_A Eukaryotic translation  100.0 9.6E-50 3.3E-54  385.6  20.6  249   44-317     5-279 (299)
 18 4b99_A Mitogen-activated prote 100.0   2E-47 6.8E-52  383.2  22.9  261   43-318    53-345 (398)
 19 4f9c_A Cell division cycle 7-r 100.0 6.8E-47 2.3E-51  375.0  24.5  205   36-250    13-251 (361)
 20 3uto_A Twitchin; kinase, muscl 100.0 1.9E-46 6.7E-51  392.8  23.7  252   43-317   156-410 (573)
 21 3s95_A LIMK-1, LIM domain kina 100.0 3.4E-46 1.1E-50  360.9  21.6  259   43-323     9-281 (310)
 22 2nru_A Interleukin-1 receptor- 100.0 1.2E-44 4.1E-49  349.1  29.3  281   31-322    12-304 (307)
 23 2c30_A Serine/threonine-protei 100.0   1E-44 3.5E-49  353.3  28.9  263   31-318    22-295 (321)
 24 3v5w_A G-protein coupled recep 100.0 1.2E-45 4.1E-50  387.7  21.5  249   43-317   188-449 (689)
 25 3fxz_A Serine/threonine-protei 100.0 1.3E-44 4.6E-49  348.6  26.9  251   43-318    19-270 (297)
 26 3p86_A Serine/threonine-protei 100.0 1.6E-45 5.6E-50  357.2  16.2  263   37-323    30-297 (309)
 27 4hcu_A Tyrosine-protein kinase 100.0 2.8E-45 9.6E-50  347.1  17.3  255   43-322     9-264 (269)
 28 2psq_A Fibroblast growth facto 100.0 7.1E-45 2.4E-49  361.6  20.7  258   43-323    80-363 (370)
 29 2qol_A Ephrin receptor; recept 100.0 2.4E-45 8.3E-50  365.5  17.3  257   43-323    44-308 (373)
 30 3kul_A Ephrin type-A receptor  100.0 3.5E-45 1.2E-49  357.3  18.0  256   44-323    49-312 (325)
 31 3zgw_A Maternal embryonic leuc 100.0 1.4E-44 4.7E-49  356.8  21.6  252   41-318     7-261 (347)
 32 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.1E-45 2.1E-49  344.3  18.3  257   42-323     6-263 (268)
 33 4eqm_A Protein kinase; transfe 100.0 3.6E-44 1.2E-48  345.0  23.2  260   43-323    10-274 (294)
 34 3soc_A Activin receptor type-2 100.0 1.7E-44 5.7E-49  351.7  20.6  272   42-322    22-316 (322)
 35 3gen_A Tyrosine-protein kinase 100.0 4.6E-45 1.6E-49  348.0  16.2  256   42-322    22-278 (283)
 36 3fe3_A MAP/microtubule affinit 100.0 3.5E-44 1.2E-48  351.1  22.8  251   40-318    11-265 (328)
 37 3vhe_A Vascular endothelial gr 100.0 6.1E-45 2.1E-49  358.8  16.1  268   33-322    11-353 (359)
 38 1luf_A Muscle-specific tyrosin 100.0 1.8E-44 6.1E-49  353.0  19.2  265   36-323    39-334 (343)
 39 1opk_A P150, C-ABL, proto-onco 100.0 7.9E-45 2.7E-49  374.9  17.4  258   42-323   218-477 (495)
 40 3ugc_A Tyrosine-protein kinase 100.0 5.8E-45   2E-49  349.5  14.8  267   43-322     9-289 (295)
 41 3kfa_A Tyrosine-protein kinase 100.0 6.1E-45 2.1E-49  347.7  14.5  258   41-322    10-269 (288)
 42 1qcf_A Haematopoetic cell kina 100.0 6.6E-45 2.2E-49  371.4  15.6  259   40-323   184-443 (454)
 43 3q4u_A Activin receptor type-1 100.0 7.3E-44 2.5E-48  342.1  21.9  260   42-321     6-299 (301)
 44 3poz_A Epidermal growth factor 100.0 1.7E-44 5.9E-49  352.3  17.7  256   43-323    14-277 (327)
 45 4euu_A Serine/threonine-protei 100.0 4.5E-43 1.6E-47  340.5  26.2  275   43-324     8-309 (319)
 46 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-44 4.6E-49  350.7  15.2  244   44-317    57-304 (311)
 47 1k9a_A Carboxyl-terminal SRC k 100.0   1E-43 3.5E-48  362.2  22.0  251   42-322   191-443 (450)
 48 3tki_A Serine/threonine-protei 100.0 4.6E-44 1.6E-48  349.1  18.4  253   43-318     6-262 (323)
 49 2yab_A Death-associated protei 100.0 8.1E-43 2.8E-47  345.9  27.6  252   42-317    10-272 (361)
 50 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-44 3.8E-49  360.9  14.2  257   42-322   112-372 (377)
 51 3dtc_A Mitogen-activated prote 100.0 6.4E-44 2.2E-48  337.6  18.5  253   43-321     6-270 (271)
 52 3tt0_A Basic fibroblast growth 100.0 5.7E-44   2E-48  356.3  18.9  259   42-323    67-351 (382)
 53 1t46_A HOMO sapiens V-KIT hard 100.0 5.2E-44 1.8E-48  345.0  17.9  260   42-323    21-306 (313)
 54 1rjb_A FL cytokine receptor; k 100.0 6.2E-44 2.1E-48  349.8  18.6  260   42-323    43-333 (344)
 55 3niz_A Rhodanese family protei 100.0 2.4E-43 8.2E-48  342.0  22.5  266   42-317    19-300 (311)
 56 2ivs_A Proto-oncogene tyrosine 100.0 5.6E-44 1.9E-48  344.9  17.7  258   42-322    21-309 (314)
 57 2w4o_A Calcium/calmodulin-depe 100.0 9.4E-44 3.2E-48  350.7  19.6  254   40-318    49-306 (349)
 58 1qpc_A LCK kinase; alpha beta  100.0   3E-44   1E-48  341.6  15.4  257   42-323    11-268 (279)
 59 1o6l_A RAC-beta serine/threoni 100.0   3E-43   1E-47  345.8  23.0  249   43-318     4-261 (337)
 60 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.1E-44 7.1E-49  367.6  15.3  257   42-323   182-439 (452)
 61 2izr_A Casein kinase I isoform 100.0 2.3E-43   8E-48  344.4  22.0  260   42-322     7-279 (330)
 62 3t9t_A Tyrosine-protein kinase 100.0   5E-44 1.7E-48  337.4  16.6  255   43-322     7-262 (267)
 63 1csn_A Casein kinase-1; phosph 100.0 4.1E-43 1.4E-47  336.3  23.2  261   42-322     8-281 (298)
 64 4aw2_A Serine/threonine-protei 100.0 1.3E-44 4.3E-49  367.5  13.4  265   34-318    64-339 (437)
 65 1tki_A Titin; serine kinase, m 100.0 2.3E-43 7.8E-48  344.1  21.6  253   42-318     3-258 (321)
 66 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-44 4.5E-49  359.3  12.9  259   43-324    70-345 (367)
 67 2y0a_A Death-associated protei 100.0 4.6E-43 1.6E-47  342.4  23.3  253   42-318     9-272 (326)
 68 1mp8_A Focal adhesion kinase 1 100.0 7.4E-44 2.5E-48  339.8  17.1  256   42-322    13-274 (281)
 69 3llt_A Serine/threonine kinase 100.0 1.9E-43 6.7E-48  348.6  20.6  213   30-251    21-264 (360)
 70 1nxk_A MAP kinase-activated pr 100.0 7.2E-44 2.5E-48  358.1  17.5  254   42-318    59-322 (400)
 71 3dbq_A Dual specificity protei 100.0 1.3E-43 4.4E-48  348.4  18.7  252   42-318     7-274 (343)
 72 3kmu_A ILK, integrin-linked ki 100.0   8E-44 2.7E-48  336.0  16.4  251   43-322     9-268 (271)
 73 3gni_B Strad alpha; kinase fol 100.0 5.7E-43   2E-47  349.4  23.5  272   42-318    23-334 (389)
 74 3o0g_A Cell division protein k 100.0 7.5E-43 2.6E-47  334.6  23.2  267   44-317     2-282 (292)
 75 1kob_A Twitchin; kinase, intra 100.0 8.8E-43   3E-47  348.8  24.6  254   42-318    49-305 (387)
 76 4f0f_A Serine/threonine-protei 100.0 4.9E-43 1.7E-47  334.6  21.6  252   43-321    18-286 (287)
 77 3lb7_A RAF proto-oncogene seri 100.0 1.1E-42 3.6E-47  337.0  24.2  258   43-322    35-298 (307)
 78 2bdw_A Hypothetical protein K1 100.0 4.8E-43 1.6E-47  347.5  22.1  255   40-318    25-285 (362)
 79 2zv2_A Calcium/calmodulin-depe 100.0   8E-43 2.7E-47  335.4  22.7  250   42-317    11-292 (298)
 80 3v8s_A RHO-associated protein  100.0 9.2E-44 3.1E-48  358.4  16.6  260   36-318    61-330 (410)
 81 2x4f_A Myosin light chain kina 100.0 6.7E-43 2.3E-47  347.9  22.6  246   49-317    94-342 (373)
 82 1ob3_A PFPK5, cell division co 100.0   6E-43 2.1E-47  334.8  21.4  266   44-317     2-280 (288)
 83 3qup_A Tyrosine-protein kinase 100.0 1.6E-43 5.6E-48  343.8  17.7  263   38-323    17-297 (323)
 84 3op5_A Serine/threonine-protei 100.0 2.6E-43 8.9E-48  349.0  18.9  266   42-322    33-327 (364)
 85 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.1E-43 1.1E-47  347.9  19.2  248   43-317    22-280 (353)
 86 3kex_A Receptor tyrosine-prote 100.0 9.2E-44 3.1E-48  346.7  15.1  257   43-324    12-276 (325)
 87 3lzb_A Epidermal growth factor 100.0 2.4E-43 8.3E-48  344.5  17.7  256   43-323    14-277 (327)
 88 3qd2_B Eukaryotic translation  100.0 7.2E-43 2.5E-47  339.1  20.8  251   42-317     4-325 (332)
 89 3c0i_A Peripheral plasma membr 100.0 7.1E-43 2.4E-47  344.6  20.9  253   43-317    23-286 (351)
 90 2wqm_A Serine/threonine-protei 100.0 1.3E-42 4.5E-47  335.5  22.3  261   42-323    30-296 (310)
 91 4e5w_A Tyrosine-protein kinase 100.0 2.8E-43 9.5E-48  338.5  17.4  265   44-321    21-299 (302)
 92 3soa_A Calcium/calmodulin-depe 100.0 1.5E-42 5.1E-47  353.1  23.7  255   41-318     8-268 (444)
 93 2xir_A Vascular endothelial gr 100.0 2.2E-43 7.6E-48  341.0  16.4  268   33-322    16-308 (316)
 94 3cc6_A Protein tyrosine kinase 100.0 2.8E-43 9.5E-48  335.5  16.8  256   42-322    10-271 (281)
 95 2h8h_A Proto-oncogene tyrosine 100.0 5.5E-44 1.9E-48  371.9  13.0  258   41-323   264-522 (535)
 96 3lxl_A Tyrosine-protein kinase 100.0 1.9E-43 6.4E-48  344.4  16.0  267   44-324    23-303 (327)
 97 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-42 5.2E-47  332.2  21.7  258   43-322    23-286 (289)
 98 1p4o_A Insulin-like growth fac 100.0 2.9E-43 9.9E-48  341.7  16.8  269   32-323    13-298 (322)
 99 1fot_A TPK1 delta, CAMP-depend 100.0 1.9E-42 6.5E-47  337.4  22.5  246   43-318     5-259 (318)
100 2zmd_A Dual specificity protei 100.0 5.6E-43 1.9E-47  350.4  19.1  250   44-318    56-321 (390)
101 4dc2_A Protein kinase C IOTA t 100.0 1.3E-42 4.6E-47  348.3  21.9  250   43-312    51-307 (396)
102 2pvf_A Fibroblast growth facto 100.0 4.3E-43 1.5E-47  343.0  17.8  258   43-323    34-317 (334)
103 2vd5_A DMPK protein; serine/th 100.0 9.1E-44 3.1E-48  358.6  13.2  264   34-318    51-328 (412)
104 1mqb_A Ephrin type-A receptor  100.0 7.5E-43 2.6E-47  341.7  19.3  255   45-323    45-308 (333)
105 4fr4_A YANK1, serine/threonine 100.0 1.4E-42 4.7E-47  346.9  21.6  250   43-317    14-271 (384)
106 2ozo_A Tyrosine-protein kinase 100.0 4.1E-43 1.4E-47  370.9  18.7  247   51-322   343-596 (613)
107 3hko_A Calcium/calmodulin-depe 100.0 2.3E-43 7.9E-48  345.6  15.6  261   38-318    20-331 (345)
108 3an0_A Dual specificity mitoge 100.0 7.8E-44 2.7E-48  348.8  12.1  256   39-317    46-310 (340)
109 2eue_A Carbon catabolite derep 100.0 2.4E-42 8.2E-47  328.0  22.0  246   43-317    12-262 (275)
110 2i1m_A Macrophage colony-stimu 100.0 2.1E-43 7.1E-48  344.5  15.0  259   42-322    44-324 (333)
111 2pmi_A Negative RE, cyclin-dep 100.0 3.6E-42 1.2E-46  334.5  23.7  265   42-317     3-293 (317)
112 1u59_A Tyrosine-protein kinase 100.0 9.9E-43 3.4E-47  332.9  19.4  256   43-323     8-271 (287)
113 3g33_A Cell division protein k 100.0 2.3E-42   8E-47  333.7  22.0  266   42-317     7-296 (308)
114 2h34_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46  333.5  23.0  260   41-323    31-295 (309)
115 2v62_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47  345.7  16.2  264   43-322    36-326 (345)
116 3mdy_A Bone morphogenetic prot 100.0   6E-42 2.1E-46  333.9  25.0  272   35-323    28-330 (337)
117 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-42 7.3E-47  341.5  22.0  246   43-318    40-294 (350)
118 3f3z_A Calcium/calmodulin-depe 100.0 5.9E-42   2E-46  325.4  24.2  251   42-317     7-261 (277)
119 3kk8_A Calcium/calmodulin depe 100.0 4.8E-42 1.7E-46  326.9  23.6  253   42-318     4-262 (284)
120 3uc3_A Serine/threonine-protei 100.0 8.1E-43 2.8E-47  345.7  18.9  254   42-318    18-275 (361)
121 3a62_A Ribosomal protein S6 ki 100.0 1.7E-42 5.7E-47  338.6  20.8  249   43-318    16-277 (327)
122 3lxp_A Non-receptor tyrosine-p 100.0   2E-42 6.7E-47  336.3  20.9  261   46-322    33-308 (318)
123 4hgt_A Casein kinase I isoform 100.0 5.4E-42 1.8E-46  328.0  23.7  262   41-322     6-278 (296)
124 4agu_A Cyclin-dependent kinase 100.0   4E-42 1.4E-46  332.0  22.9  270   43-318     2-285 (311)
125 4fvq_A Tyrosine-protein kinase 100.0 1.7E-42 5.8E-47  330.9  20.0  252   43-324     7-275 (289)
126 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.4E-43 2.9E-47  342.5  18.3  248   42-318     7-259 (336)
127 3cok_A Serine/threonine-protei 100.0 1.8E-42 6.1E-47  329.2  19.6  251   41-317     8-262 (278)
128 2a2a_A Death-associated protei 100.0 1.1E-41 3.9E-46  331.1  25.6  253   42-318    10-273 (321)
129 1xjd_A Protein kinase C, theta 100.0 1.1E-42 3.6E-47  343.0  18.5  250   40-316    13-268 (345)
130 3brb_A Proto-oncogene tyrosine 100.0 4.2E-43 1.4E-47  339.4  15.2  265   35-322    25-306 (313)
131 4ejn_A RAC-alpha serine/threon 100.0 9.8E-43 3.3E-47  354.4  18.5  250   42-318   146-405 (446)
132 2eva_A TAK1 kinase - TAB1 chim 100.0   1E-42 3.4E-47  336.9  17.4  253   44-323     8-262 (307)
133 3uzp_A CKI-delta, CKID, casein 100.0 1.7E-41 5.9E-46  324.8  25.8  261   42-322     7-278 (296)
134 2a19_B Interferon-induced, dou 100.0 1.6E-42 5.5E-47  329.6  18.4  248   42-323     9-273 (284)
135 1b6c_B TGF-B superfamily recep 100.0 1.4E-41 4.8E-46  332.3  25.5  268   35-322    33-334 (342)
136 3ork_A Serine/threonine protei 100.0 1.3E-42 4.5E-47  336.3  18.0  257   42-320    10-277 (311)
137 3a8x_A Protein kinase C IOTA t 100.0 9.1E-42 3.1E-46  336.2  23.9  250   43-312     8-264 (345)
138 2w1i_A JAK2; chromosomal rearr 100.0 6.8E-43 2.3E-47  340.5  15.6  267   43-322    40-320 (326)
139 1u5q_A Serine/threonine protei 100.0 1.2E-42 4.2E-47  342.8  17.5  247   43-318    53-306 (348)
140 2buj_A Serine/threonine-protei 100.0 7.8E-43 2.7E-47  337.9  15.8  261   42-323    27-305 (317)
141 1byg_A CSK, protein (C-termina 100.0 5.2E-43 1.8E-47  333.1  14.3  250   43-322    20-271 (278)
142 2r5t_A Serine/threonine-protei 100.0 7.1E-43 2.4E-47  347.8  15.7  252   42-320    36-292 (373)
143 3gxj_A TGF-beta receptor type- 100.0 6.2E-44 2.1E-48  342.6   7.7  261   43-323     2-296 (303)
144 3pls_A Macrophage-stimulating  100.0   4E-42 1.4E-46  329.5  20.3  256   45-323    22-286 (298)
145 2i0e_A Protein kinase C-beta I 100.0 4.2E-42 1.4E-46  339.8  20.8  249   42-317    18-276 (353)
146 1xbb_A Tyrosine-protein kinase 100.0 1.2E-42 4.1E-47  333.0  16.4  255   42-322    14-277 (291)
147 3fdn_A Serine/threonine-protei 100.0 4.8E-42 1.6E-46  326.6  20.4  248   42-318     7-258 (279)
148 2owb_A Serine/threonine-protei 100.0 5.7E-42   2E-46  335.6  21.1  250   42-318    39-292 (335)
149 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-42 6.4E-47  338.2  17.5  267   42-317    32-318 (329)
150 2ac3_A MAP kinase-interacting  100.0 1.1E-41 3.9E-46  329.6  22.8  265   43-318    11-296 (316)
151 3nsz_A CK II alpha, casein kin 100.0 1.6E-41 5.5E-46  330.5  24.0  261   43-317    35-319 (330)
152 2w5a_A Serine/threonine-protei 100.0 2.4E-42 8.3E-47  328.2  17.7  257   42-322     4-272 (279)
153 3is5_A Calcium-dependent prote 100.0 1.3E-41 4.4E-46  325.3  22.9  251   43-317    21-278 (285)
154 2clq_A Mitogen-activated prote 100.0 5.1E-42 1.8E-46  328.3  20.0  252   44-317    22-278 (295)
155 3kn6_A Ribosomal protein S6 ki 100.0 2.9E-42 9.9E-47  336.7  18.6  250   49-318    16-271 (325)
156 2jii_A Serine/threonine-protei 100.0 4.8E-42 1.6E-46  338.2  20.3  262   43-323    41-335 (352)
157 3f66_A Hepatocyte growth facto 100.0 4.3E-42 1.5E-46  329.8  19.5  256   44-323    25-290 (298)
158 2jam_A Calcium/calmodulin-depe 100.0 7.3E-42 2.5E-46  329.6  21.1  251   42-317     7-261 (304)
159 4eut_A Serine/threonine-protei 100.0 4.9E-42 1.7E-46  344.0  20.4  274   43-323     8-308 (396)
160 1fvr_A Tyrosine-protein kinase 100.0 2.9E-42   1E-46  336.0  18.2  254   44-322    25-298 (327)
161 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-41 4.4E-46  336.8  23.1  254   38-322    59-337 (365)
162 3dls_A PAS domain-containing s 100.0 2.5E-42 8.6E-47  338.7  17.7  243   42-318    22-275 (335)
163 1vzo_A Ribosomal protein S6 ki 100.0 2.8E-42 9.5E-47  340.9  18.1  255   43-319    53-323 (355)
164 3bhy_A Death-associated protei 100.0 1.2E-41   4E-46  324.1  21.7  251   43-317     4-265 (283)
165 2yex_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46  326.1  18.0  253   42-317     5-261 (276)
166 2x7f_A TRAF2 and NCK-interacti 100.0 4.7E-42 1.6E-46  333.7  19.1  260   34-317    14-286 (326)
167 3a7i_A MST3 kinase, serine/thr 100.0 6.7E-42 2.3E-46  329.5  19.8  249   43-318    21-271 (303)
168 4aaa_A Cyclin-dependent kinase 100.0 4.7E-42 1.6E-46  335.3  18.9  268   42-317    23-306 (331)
169 1x8b_A WEE1HU, WEE1-like prote 100.0 8.7E-42   3E-46  324.4  20.3  245   42-317     9-279 (289)
170 3pg1_A Mitogen-activated prote 100.0 9.4E-42 3.2E-46  336.8  21.2  287   34-329    12-330 (362)
171 3ll6_A Cyclin G-associated kin 100.0 5.3E-43 1.8E-47  340.8  12.0  255   42-323    26-307 (337)
172 2y94_A 5'-AMP-activated protei 100.0 1.3E-41 4.5E-46  348.8  22.8  247   43-317    15-266 (476)
173 2acx_A G protein-coupled recep 100.0 8.7E-42   3E-46  356.2  21.7  254   42-318   182-445 (576)
174 3lm5_A Serine/threonine-protei 100.0 9.9E-42 3.4E-46  332.8  20.7  259   38-318    22-288 (327)
175 2yfx_A Tyrosine-protein kinase 100.0 1.9E-42 6.4E-47  337.4  15.5  266   35-323    20-303 (327)
176 3c1x_A Hepatocyte growth facto 100.0 2.7E-42 9.1E-47  343.6  16.8  255   45-323    90-354 (373)
177 2vwi_A Serine/threonine-protei 100.0 2.7E-42 9.3E-47  331.1  16.1  258   42-317    13-287 (303)
178 2wtk_C Serine/threonine-protei 100.0   3E-41   1E-45  324.8  23.3  253   41-318     2-264 (305)
179 1wak_A Serine/threonine-protei 100.0   3E-41   1E-45  336.1  24.0  267   43-317    36-391 (397)
180 3oz6_A Mitogen-activated prote 100.0   2E-41   7E-46  338.2  22.7  204   41-251     6-236 (388)
181 2j7t_A Serine/threonine-protei 100.0 1.1E-41 3.6E-46  327.4  19.7  253   42-317    17-275 (302)
182 2rku_A Serine/threonine-protei 100.0 2.2E-41 7.5E-46  324.5  21.9  249   43-318    14-266 (294)
183 4fl3_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46  364.3  18.4  246   50-321   375-628 (635)
184 3com_A Serine/threonine-protei 100.0 7.5E-41 2.6E-45  323.5  25.4  252   41-317    26-278 (314)
185 2qr7_A Ribosomal protein S6 ki 100.0 1.3E-41 4.3E-46  334.8  20.3  253   42-318    20-278 (342)
186 2y7j_A Phosphorylase B kinase  100.0 8.7E-41   3E-45  331.5  26.4  259   35-317    85-359 (365)
187 3g2f_A Bone morphogenetic prot 100.0 1.5E-41   5E-46  331.6  20.4  270   43-323    12-317 (336)
188 2vgo_A Serine/threonine-protei 100.0 2.3E-41   8E-46  322.7  21.1  246   43-317    13-262 (284)
189 3byv_A Rhoptry kinase; malaria 100.0 1.3E-42 4.5E-47  345.7  12.7  241   43-317    72-359 (377)
190 3rp9_A Mitogen-activated prote 100.0 4.8E-41 1.6E-45  342.8  24.5  195   42-242    51-280 (458)
191 3eqc_A Dual specificity mitoge 100.0 1.5E-41 5.1E-46  335.3  19.8  261   43-318    32-325 (360)
192 1ua2_A CAK, cell division prot 100.0   3E-41   1E-45  331.9  21.9  271   38-318     4-292 (346)
193 2h6d_A 5'-AMP-activated protei 100.0 3.4E-41 1.2E-45  319.7  21.5  249   42-318     9-262 (276)
194 1t4h_A Serine/threonine-protei 100.0 1.3E-41 4.5E-46  325.4  18.8  246   45-317    27-282 (290)
195 3q5i_A Protein kinase; CDPK, m 100.0 3.6E-41 1.2E-45  348.1  23.3  254   40-318    32-302 (504)
196 3ttj_A Mitogen-activated prote 100.0   3E-41   1E-45  345.4  22.5  265   42-318    60-356 (464)
197 3i6u_A CDS1, serine/threonine- 100.0 1.3E-41 4.6E-46  343.6  19.4  254   40-317   131-399 (419)
198 3kvw_A DYRK2, dual specificity 100.0 2.2E-41 7.5E-46  343.1  21.0  201   42-251    95-304 (429)
199 1u46_A ACK-1, activated CDC42  100.0 2.8E-42 9.7E-47  329.4  13.7  257   43-323    17-283 (291)
200 3mtl_A Cell division protein k 100.0 4.3E-42 1.5E-46  335.0  15.2  264   44-317     2-281 (324)
201 2pml_X PFPK7, Ser/Thr protein  100.0 6.1E-42 2.1E-46  335.9  16.0  258   43-317    30-322 (348)
202 1z57_A Dual specificity protei 100.0 6.2E-41 2.1E-45  326.1  22.9  268   42-318    12-329 (339)
203 3fme_A Dual specificity mitoge 100.0 6.9E-42 2.4E-46  326.6  15.9  253   42-317     5-266 (290)
204 3sv0_A Casein kinase I-like; t 100.0 8.5E-41 2.9E-45  343.4  25.1  261   42-322     5-276 (483)
205 2r3i_A Cell division protein k 100.0 8.1E-41 2.8E-45  320.8  22.8  268   43-317     2-283 (299)
206 3nyv_A Calmodulin-domain prote 100.0 3.2E-41 1.1E-45  346.5  21.1  252   42-318    24-282 (484)
207 3cek_A Dual specificity protei 100.0 4.6E-42 1.6E-46  332.3  13.8  261   33-318    17-293 (313)
208 3eb0_A Putative uncharacterize 100.0 3.4E-41 1.2E-45  336.1  20.4  267   39-317     2-321 (383)
209 3lij_A Calcium/calmodulin depe 100.0 5.3E-41 1.8E-45  346.0  22.4  251   42-317    35-291 (494)
210 3mi9_A Cell division protein k 100.0 9.6E-41 3.3E-45  328.4  23.2  267   43-318    16-312 (351)
211 3mwu_A Calmodulin-domain prote 100.0   1E-40 3.4E-45  343.2  24.3  252   42-318    20-277 (486)
212 1phk_A Phosphorylase kinase; g 100.0 1.1E-40 3.8E-45  319.7  22.8  253   41-317    14-283 (298)
213 3q60_A ROP5B; pseudokinase, tr 100.0 8.5E-42 2.9E-46  339.0  15.4  254   43-317    61-352 (371)
214 1cm8_A Phosphorylated MAP kina 100.0 1.7E-41 5.9E-46  336.8  17.6  263   42-318    23-308 (367)
215 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.6E-41 2.3E-45  348.1  22.2  249   43-312   184-438 (543)
216 1blx_A Cyclin-dependent kinase 100.0 6.7E-41 2.3E-45  325.3  20.2  271   39-317     6-296 (326)
217 3e3p_A Protein kinase, putativ 100.0 4.4E-41 1.5E-45  331.3  19.0  274   36-318    15-315 (360)
218 2iwi_A Serine/threonine-protei 100.0 1.5E-41 5.3E-46  328.3  15.2  246   38-318    25-284 (312)
219 4e7w_A Glycogen synthase kinas 100.0   7E-41 2.4E-45  335.6  20.1  265   43-318    39-322 (394)
220 2ycf_A Serine/threonine-protei 100.0 9.7E-41 3.3E-45  324.5  20.1  252   42-317     8-274 (322)
221 3n9x_A Phosphotransferase; mal 100.0 1.6E-40 5.5E-45  336.9  22.4  200   42-247    24-253 (432)
222 2vx3_A Dual specificity tyrosi 100.0 4.2E-40 1.4E-44  328.2  25.0  210   35-251    45-263 (382)
223 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.6E-41 8.9E-46  327.2  15.6  261   37-323    26-301 (319)
224 3qyz_A Mitogen-activated prote 100.0 3.7E-40 1.3E-44  326.4  24.2  271   41-318    24-314 (364)
225 3rgf_A Cyclin-dependent kinase 100.0 1.4E-40 4.7E-45  334.2  21.3  203   42-250    18-240 (405)
226 2xrw_A Mitogen-activated prote 100.0 2.5E-40 8.5E-45  328.7  22.7  265   42-318    23-319 (371)
227 1j1b_A Glycogen synthase kinas 100.0 8.4E-41 2.9E-45  337.8  19.4  263   44-318    54-337 (420)
228 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-40 3.8E-45  355.8  20.8  249   42-317   339-597 (674)
229 3fhr_A MAP kinase-activated pr 100.0 1.5E-40 5.2E-45  325.9  20.1  254   42-318    26-288 (336)
230 2i6l_A Mitogen-activated prote 100.0 4.8E-41 1.6E-45  324.6  16.0  266   42-317     9-305 (320)
231 1zy4_A Serine/threonine-protei 100.0 2.2E-40 7.5E-45  317.2  19.8  253   42-318     4-284 (303)
232 1q8y_A SR protein kinase; tran 100.0 4.1E-40 1.4E-44  325.7  21.8  268   43-318    18-334 (373)
233 2wei_A Calmodulin-domain prote 100.0 1.3E-39 4.4E-44  311.3  24.3  253   40-317    18-276 (287)
234 2eu9_A Dual specificity protei 100.0 4.4E-40 1.5E-44  322.5  21.2  267   42-317    17-333 (355)
235 2j0j_A Focal adhesion kinase 1 100.0   8E-41 2.7E-45  355.8  17.2  256   42-322   388-649 (656)
236 3aln_A Dual specificity mitoge 100.0 2.8E-40 9.6E-45  321.7  19.4  255   43-317    21-285 (327)
237 2b9h_A MAP kinase FUS3, mitoge 100.0   2E-40 6.9E-45  325.7  17.5  266   42-318     9-306 (353)
238 4exu_A Mitogen-activated prote 100.0 5.9E-40   2E-44  326.0  20.8  260   42-318    40-324 (371)
239 2fst_X Mitogen-activated prote 100.0 1.4E-40 4.7E-45  330.5  14.8  264   41-318    26-312 (367)
240 2rio_A Serine/threonine-protei 100.0   2E-39 6.8E-44  329.1  21.3  251   44-317    15-295 (434)
241 2dyl_A Dual specificity mitoge 100.0 4.3E-39 1.5E-43  311.2  22.2  253   42-317    23-283 (318)
242 3a99_A Proto-oncogene serine/t 100.0 1.6E-40 5.4E-45  323.3  11.6  248   36-318    35-294 (320)
243 3coi_A Mitogen-activated prote 100.0 1.5E-39 5.3E-44  320.2  18.6  262   42-318    22-306 (353)
244 3p23_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43  325.4  19.9  250   42-317    22-283 (432)
245 3uqc_A Probable conserved tran 100.0 1.1E-38 3.7E-43  306.1  18.7  233   42-324    29-265 (286)
246 2pzi_A Probable serine/threoni 100.0 1.4E-38 4.9E-43  340.2  18.3  239   42-321    78-325 (681)
247 3m2w_A MAP kinase-activated pr 100.0 1.3E-37 4.3E-42  299.6  21.7  229   42-318    15-257 (299)
248 3qa8_A MGC80376 protein; kinas 100.0   8E-39 2.7E-43  337.7  12.8  261   44-314    14-294 (676)
249 3dzo_A Rhoptry kinase domain;  100.0 2.9E-38 9.8E-43  318.6  16.3  242   42-317    76-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41  300.9  12.1  242   43-316    19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 3.4E-31 1.2E-35  277.2   6.0  184   52-245   242-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 9.9E-28 3.4E-32  249.5  10.7  187   44-246   336-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 5.1E-24 1.8E-28  203.7  10.2  151   38-219    84-252 (282)
254 1zth_A RIO1 serine protein kin  99.8 3.5E-20 1.2E-24  174.7  10.2  136   46-195    49-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7   3E-17   1E-21  162.5  10.7  146   36-194    84-264 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4 5.1E-13 1.7E-17  125.1  11.9  148   38-193     8-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.3 4.3E-12 1.5E-16  117.8   9.0  139   43-194    19-214 (264)
258 3sg8_A APH(2'')-ID; antibiotic  99.1 6.1E-11 2.1E-15  113.6   7.2  185   49-246    25-287 (304)
259 3dxp_A Putative acyl-COA dehyd  99.1 2.9E-10 9.8E-15  111.4  11.0  143   47-194    41-248 (359)
260 3r70_A Aminoglycoside phosphot  98.8 4.1E-08 1.4E-12   94.6  13.4  144   38-195    28-238 (320)
261 3ovc_A Hygromycin-B 4-O-kinase  98.8 4.7E-08 1.6E-12   96.1  12.3  163   27-195    20-244 (362)
262 3d1u_A Putative fructosamine-3  98.7 5.1E-08 1.8E-12   92.8  10.9  141   47-193    18-215 (288)
263 3tdw_A Gentamicin resistance p  98.6 3.6E-07 1.2E-11   87.5  14.3  137   49-195    24-225 (306)
264 4gkh_A Aminoglycoside 3'-phosp  98.6 5.7E-07   2E-11   83.9  12.8  143   42-194    23-223 (272)
265 3ats_A Putative uncharacterize  98.4 3.2E-07 1.1E-11   89.3   8.3   80   49-128    25-121 (357)
266 2olc_A MTR kinase, methylthior  98.2   1E-05 3.5E-10   80.0  13.3   75   49-125    35-120 (397)
267 2q83_A YTAA protein; 2635576,   98.2 7.5E-06 2.6E-10   78.6  11.5  139   50-193    38-251 (346)
268 3jr1_A Putative fructosamine-3  98.0   4E-05 1.4E-09   73.6  12.7  138   48-190    40-232 (312)
269 3f7w_A Putative fructosamine-3  97.9 4.2E-05 1.4E-09   72.1  10.7   79   45-127    16-97  (288)
270 2ppq_A HSK, HK, homoserine kin  97.9 6.9E-05 2.3E-09   71.5  11.8  158   33-193     6-216 (322)
271 2pyw_A Uncharacterized protein  97.9 6.5E-05 2.2E-09   74.9  11.5   77  163-242   231-312 (420)
272 1zyl_A Hypothetical protein YI  97.7 0.00061 2.1E-08   65.0  15.3  159   32-194     9-223 (328)
273 3dxq_A Choline/ethanolamine ki  97.5 0.00038 1.3E-08   65.9   9.9  140   46-194    20-202 (301)
274 1nw1_A Choline kinase (49.2 KD  97.5 0.00021 7.2E-09   71.6   8.4   73   49-127    78-159 (429)
275 3csv_A Aminoglycoside phosphot  97.5 0.00067 2.3E-08   65.0  11.7  141   50-195    24-218 (333)
276 3feg_A Choline/ethanolamine ki  97.3 0.00067 2.3E-08   66.7   9.5  139   50-193    56-253 (379)
277 2qg7_A Ethanolamine kinase PV0  97.3 0.00078 2.7E-08   68.0  10.1   73   50-127   114-188 (458)
278 3i1a_A Spectinomycin phosphotr  97.1  0.0039 1.3E-07   60.1  12.0   32  163-194   205-236 (339)
279 3c5i_A Choline kinase; choline  97.1   0.001 3.4E-08   64.8   7.7   73   49-126    38-120 (369)
280 2yle_A Protein spire homolog 1  96.9  0.0048 1.6E-07   55.6   9.7   99  125-241    33-131 (229)
281 3f2s_A CK, chetk-alpha, cholin  96.6  0.0044 1.5E-07   61.3   8.3  139   51-193    59-279 (401)
282 3mes_A Choline kinase; malaria  95.1   0.053 1.8E-06   53.9   8.5   73   50-127    76-157 (424)
283 3g15_A CK, chetk-alpha, cholin  93.6    0.29   1E-05   47.9  10.1   29  165-193   245-279 (401)
284 4ano_A ESSB; membrane protein,  88.9     1.1 3.8E-05   40.0   7.6   82   98-192    48-131 (219)
285 4ann_A ESSB; membrane protein,  87.6    0.85 2.9E-05   40.7   6.0  115   98-247    43-158 (215)
286 3cxl_A N-chimerin; SH2, RHO-GA  74.7    0.36 1.2E-05   48.4  -1.7   61   48-111   146-215 (463)
287 3oja_A Leucine-rich immune mol  63.2    0.36 1.2E-05   48.6  -4.7   32   81-112   320-351 (487)
288 1cja_A Protein (actin-fragmin   58.2      11 0.00038   35.8   5.0  136   54-195    78-238 (342)
289 3ls8_A Phosphatidylinositol 3-  53.8      97  0.0033   31.9  11.5   82  103-192   402-500 (614)
290 3hhm_A Phosphatidylinositol-4,  52.2      81  0.0028   34.8  11.1   25  169-193   937-961 (1091)
291 2fq3_A Transcription regulator  25.0      43  0.0015   26.0   2.6   37  287-323    45-81  (104)
292 2x6h_A GH13170P, VPS34, phosph  21.6      44  0.0015   35.0   2.7   25  169-193   551-575 (696)
293 1e7u_A Phosphatidylinositol 3-  21.6      57  0.0019   35.5   3.6   25  169-193   804-828 (961)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.1e-56  Score=429.29  Aligned_cols=256  Identities=25%  Similarity=0.419  Sum_probs=214.3

Q ss_pred             CCCCcCceecccCcEEEEEEEeC------CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP------NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ++|.+.+.||+|+||.||+|.+.      +++.||||+++.......++|.+|+.++++++|||||+++++|.+....+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            56788899999999999999863      478899999987766666789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEE
Q 014904          118 VYEFVPNNTLEFHLHGKG-----------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKV  186 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl  186 (416)
                      ||||+++|+|.++|+..+           ...++|..++.|+.|+|.||+|||+.   +||||||||+||||+.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence            999999999999997532           34699999999999999999999999   9999999999999999999999


Q ss_pred             eecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHH
Q 014904          187 ADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPL  264 (416)
Q Consensus       187 ~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~  264 (416)
                      +|||+++........ ......||+.|+|||++.++.++.++|||||||+||||+| |+.||.....   ..+.      
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~------  240 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVI------  240 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHH------
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHH------
Confidence            999999866543332 2334679999999999999999999999999999999999 9999976442   1111      


Q ss_pred             hHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          265 LNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       265 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                        ..+..+....         .+..++..+.+++.+||+.+|++||+|.||++.|+..
T Consensus       241 --~~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          241 --ECITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             --HHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --HHHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              1222333211         1223446789999999999999999999999999854


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.7e-55  Score=431.10  Aligned_cols=256  Identities=27%  Similarity=0.422  Sum_probs=207.5

Q ss_pred             CCCCcCceecccCcEEEEEEEeC------CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP------NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ++|.+.+.||+|+||.||+|.+.      +++.||||+++.......++|.+|+.++++++|||||+++++|.+....+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            46777889999999999999864      478999999987766666789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCce
Q 014904          118 VYEFVPNNTLEFHLHGKG-------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA  184 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~  184 (416)
                      ||||+++|+|.++++...             ...++|.+++.|+.|+|.||+|||+.   +||||||||+||||+.++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence            999999999999997542             23599999999999999999999998   99999999999999999999


Q ss_pred             EEeecccceeccCCC-cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhh
Q 014904          185 KVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWAR  262 (416)
Q Consensus       185 kl~DFGla~~~~~~~-~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~  262 (416)
                      ||+|||+++...... ....+...||+.|+|||++.+..++.++|||||||+||||+| |+.||.....   ..+.    
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~----  270 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAI----  270 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHH----
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHH----
Confidence            999999998764433 233355789999999999999999999999999999999999 9999976442   1111    


Q ss_pred             HHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          263 PLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       263 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                          ..+..+.-     +    ..+..++..+.+|+.+||+.||++||+|.||++.|+..
T Consensus       271 ----~~i~~g~~-----~----~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          271 ----DCITQGRE-----L----ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             ----HHHHHTCC-----C----CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             ----HHHHcCCC-----C----CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence                11222321     1    11223446789999999999999999999999999864


No 3  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=6.1e-56  Score=430.52  Aligned_cols=254  Identities=25%  Similarity=0.403  Sum_probs=211.4

Q ss_pred             CCCcCceecccCcEEEEEEEeC------CCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           45 GFSDANLLGQGGFGYVHRGVLP------NGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        45 ~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      .+++.+.||+|+||.||+|.+.      +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+....+|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            4566789999999999999862      46899999997543 3345789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc
Q 014904          118 VYEFVPNNTLEFHLHGKG--------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE  183 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~  183 (416)
                      ||||+++|+|.++|+...              ...++|..++.|+.|+|.||+|||+.   +||||||||+||||++++.
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence            999999999999996532              23589999999999999999999999   9999999999999999999


Q ss_pred             eEEeecccceeccCCC-cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhh
Q 014904          184 AKVADFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWA  261 (416)
Q Consensus       184 ~kl~DFGla~~~~~~~-~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~  261 (416)
                      +||+|||+++...... ....+...||+.|+|||++.++.++.++|||||||+||||+| |+.||.....   ..+.   
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~~~---  257 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVV---  257 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---HHHH---
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---HHHH---
Confidence            9999999998664432 233455689999999999999999999999999999999999 8999976543   1222   


Q ss_pred             hHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          262 RPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       262 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                           ..+..+...         ..+.+++..+.+++.+||+.+|.+||+|.||++.|+.
T Consensus       258 -----~~i~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          258 -----EMIRNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             -----HHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             -----HHHHcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence                 222333321         1223345678999999999999999999999999984


No 4  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.2e-54  Score=418.73  Aligned_cols=257  Identities=29%  Similarity=0.493  Sum_probs=204.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .++|.+.+.||+|+||+||+|.+.+  .||||+++....  ...+.|.+|+.++++++|||||+++++|.+ +..+||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            4678888999999999999999743  599999975432  334679999999999999999999999865 56899999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC-
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN-  199 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~-  199 (416)
                      |+++|+|.++|+.... .++|..++.|+.|+|.||+|||+.   +||||||||+||||+.++.+||+|||+|+...... 
T Consensus       112 y~~gGsL~~~l~~~~~-~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          112 WCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CCSSCBHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             cCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            9999999999976543 699999999999999999999998   99999999999999999999999999998765432 


Q ss_pred             cceeecccccccccChhhhcc---CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          200 THVSTRVMGTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~---~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ........||+.|+|||++.+   +.++.++|||||||+||||+||+.||......  ..+        ...+..+.   
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~--------~~~~~~~~---  254 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQI--------IFMVGRGY---  254 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHH--------HHHHHTTC---
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHH--------HHHHhcCC---
Confidence            233455789999999999963   46999999999999999999999999764431  111        11112221   


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                       ..|.+ ...+.+++..+.+|+.+||+.+|++||+|.||++.|+.
T Consensus       255 -~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~  297 (307)
T 3omv_A          255 -ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             -CCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred             -CCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence             11211 12233455688999999999999999999999999874


No 5  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=4.8e-54  Score=422.59  Aligned_cols=251  Identities=21%  Similarity=0.357  Sum_probs=206.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||++.....  ...+.+.+|+.++++++|||||++++++.+....||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            37899999999999999999995 5799999999986543  23457899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++|+|.++|.......+++..++.|+.|++.||.|||+.   +||||||||+||||+.++.+||+|||+++......
T Consensus       103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            999999999999876666789999999999999999999999   99999999999999999999999999998764322


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                       ...+..+||+.|+|||++.+..++.++|||||||+||||+||+.||.....      .+.    + ..+..+.+..   
T Consensus       180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~----~-~~i~~~~~~~---  244 (350)
T 4b9d_A          180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNL----V-LKIISGSFPP---  244 (350)
T ss_dssp             -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHH----H-HHHHHTCCCC---
T ss_pred             -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHH----H-HHHHcCCCCC---
Confidence             223456899999999999999999999999999999999999999976543      111    1 1122333221   


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        +..    .....+.+|+.+||+.||++||++.|+++
T Consensus       245 --~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          245 --VSL----HYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             --CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CCc----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              112    23357889999999999999999999986


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=2.7e-53  Score=416.65  Aligned_cols=249  Identities=23%  Similarity=0.359  Sum_probs=210.2

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEec
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV  122 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  122 (416)
                      ..|...+.||+|+||.||+|.+ .+|+.||||++........+.+.+|+.+++.++|||||++++++.+.+..||||||+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4699999999999999999996 479999999998665555567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcce
Q 014904          123 PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV  202 (416)
Q Consensus       123 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~  202 (416)
                      ++|+|.+++...   .+++..+..|+.|++.||+|||+.   +||||||||+||||+.++.+||+|||+++........ 
T Consensus       154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-  226 (346)
T 4fih_A          154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-  226 (346)
T ss_dssp             TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-
T ss_pred             CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-
Confidence            999999999753   589999999999999999999999   9999999999999999999999999999977554332 


Q ss_pred             eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccc
Q 014904          203 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKL  282 (416)
Q Consensus       203 ~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l  282 (416)
                      .+..+||+.|+|||++.+..|+.++|||||||+||||++|+.||......   .+.        ..+..+....+     
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~--------~~i~~~~~~~~-----  290 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAM--------KMIRDNLPPRL-----  290 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH--------HHHHHSSCCCC-----
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHH--------HHHHcCCCCCC-----
Confidence            34578999999999999999999999999999999999999999765431   111        11112211111     


Q ss_pred             cCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          283 HNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       283 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        .........+.+|+.+||+.||++||++.|+++
T Consensus       291 --~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          291 --KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             --SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             --CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              111223457889999999999999999999886


No 7  
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=7.6e-54  Score=415.31  Aligned_cols=270  Identities=23%  Similarity=0.325  Sum_probs=204.8

Q ss_pred             CCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCC----eEEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGS----QRMLVY  119 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~  119 (416)
                      ++|.+.+.||+|+||.||+|.+ +|+.||||+++.... ....+..|+.++.+++|||||+++++|.+..    ..+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4677889999999999999998 689999999975321 1122334666667889999999999998753    579999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-----HPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-----~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      ||+++|+|.++++..   .++|..+++|+.|++.||+|||+.+     .++||||||||+||||+.++.+||+|||+++.
T Consensus        81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            999999999999764   5999999999999999999999863     45899999999999999999999999999987


Q ss_pred             ccCCCcce---eecccccccccChhhhccC------CCCchhhhHhHHHHHHHHHhCCCCCCCCCcc----cchhhhhhh
Q 014904          195 ASDVNTHV---STRVMGTFGYLAPEYASSG------KLTEKSDVFSFGVMLLELITGRRPVDSTHTF----VEDSLVDWA  261 (416)
Q Consensus       195 ~~~~~~~~---~~~~~gt~~YlaPE~~~~~------~~t~ksDV~SlGvvL~elltG~~pf~~~~~~----~~~~l~~~~  261 (416)
                      ........   ....+||+.|+|||++.+.      .++.++|||||||+||||+||+.||......    .+.....+.
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence            75543322   2346799999999999754      4678999999999999999999887643321    111111111


Q ss_pred             hHHhHHhhhcCCcccccCccccCcC-CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          262 RPLLNRAIEDGNFDTLVDPKLHNEY-NHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       262 ~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ...+...+..+.    .+|.+.... +.+.+..+.+++.+||+.||++||||.||++.|+..
T Consensus       238 ~~~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          238 VEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             HHHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            111112222222    233333222 345677899999999999999999999999999753


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=2.6e-53  Score=411.02  Aligned_cols=247  Identities=23%  Similarity=0.343  Sum_probs=209.0

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ++|.+.++||+|+||+||+|.. .+|+.||||++....   ....+.+.+|+.++++++|||||++++++.+....||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999999995 579999999997532   233467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++|+|.+++...+  .+++..+..++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+|+......
T Consensus       112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred             ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence            9999999999997654  599999999999999999999999   99999999999999999999999999999875433


Q ss_pred             c-ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          200 T-HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       200 ~-~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      . ......+||+.|+|||++.+..++.++|||||||+||||++|+.||...+.   ..        +...+..+.+.   
T Consensus       187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---~~--------~~~~i~~~~~~---  252 (311)
T 4aw0_A          187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---GL--------IFAKIIKLEYD---  252 (311)
T ss_dssp             TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HH--------HHHHHHHTCCC---
T ss_pred             CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HH--------HHHHHHcCCCC---
Confidence            2 334567899999999999999999999999999999999999999976442   11        11122233321   


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIV  316 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv  316 (416)
                         +...    ....+.+|+.+||+.||.+||++.|++
T Consensus       253 ---~p~~----~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          253 ---FPEK----FFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             ---CCTT----CCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             ---CCcc----cCHHHHHHHHHHccCCHhHCcChHHHc
Confidence               1122    234688999999999999999999864


No 9  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=3.9e-52  Score=418.17  Aligned_cols=249  Identities=23%  Similarity=0.353  Sum_probs=211.0

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEec
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV  122 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  122 (416)
                      +.|...+.||+|+||.||+|.+ .+|+.||||++........+.+.+|+.+++.++|||||++++++.+.+..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            4699999999999999999996 469999999998766666667899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcce
Q 014904          123 PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV  202 (416)
Q Consensus       123 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~  202 (416)
                      ++|+|.+++...   .+++..+..|+.|++.||+|||+.   +||||||||+||||+.++.+||+|||+++........ 
T Consensus       231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-  303 (423)
T 4fie_A          231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-  303 (423)
T ss_dssp             TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-
T ss_pred             CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-
Confidence            999999999754   489999999999999999999999   9999999999999999999999999999877554332 


Q ss_pred             eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccc
Q 014904          203 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKL  282 (416)
Q Consensus       203 ~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l  282 (416)
                      ....+||+.|+|||++.+..|+.++|||||||+||||++|+.||.......   +.        ..+..+....+.    
T Consensus       304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~--------~~i~~~~~~~~~----  368 (423)
T 4fie_A          304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---AM--------KMIRDNLPPRLK----  368 (423)
T ss_dssp             BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH--------HHHHHSCCCCCS----
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HH--------HHHHcCCCCCCc----
Confidence            345789999999999999999999999999999999999999997654311   11        111222111111    


Q ss_pred             cCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          283 HNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       283 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                         ........+.+|+.+||+.||++||++.|+++
T Consensus       369 ---~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          369 ---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             ---CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               11123357889999999999999999999986


No 10 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=7.4e-53  Score=412.24  Aligned_cols=252  Identities=21%  Similarity=0.233  Sum_probs=206.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..+.|.+.++||+|+||.||+|.+ .+|+.||||+++....     +.+|+.++++++|||||++++++.++...+||||
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            345678888999999999999995 4699999999986432     2469999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC-ceEEeecccceeccCCC
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF-EAKVADFGLAKIASDVN  199 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~-~~kl~DFGla~~~~~~~  199 (416)
                      |+++++|.+++...+  .+++..+..++.|++.||+|||+.   +||||||||+||||+.++ .+||+|||+++......
T Consensus       131 y~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          131 LLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             ccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            999999999997654  599999999999999999999999   999999999999999987 59999999998765432


Q ss_pred             cc----eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          200 TH----VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       200 ~~----~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ..    ....++||+.|+|||++.+..++.++|||||||+||||+||+.||........          +. .+..+...
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----------~~-~i~~~~~~  274 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----------CL-KIASEPPP  274 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----------HH-HHHHSCCG
T ss_pred             cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----------HH-HHHcCCCC
Confidence            21    12346799999999999999999999999999999999999999976543111          11 11111110


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                             ....+......+.+++.+||+.||.+||++.||++.|..
T Consensus       275 -------~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          275 -------IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             -------GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -------chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence                   011223344678899999999999999999999998864


No 11 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=8.7e-53  Score=415.48  Aligned_cols=264  Identities=27%  Similarity=0.383  Sum_probs=214.6

Q ss_pred             HHHHHhhCCCCcCceecccCcEEEEEEEeCC------CcEEEEEEeecCCccc-HHHHHHHHHHHHhcCC-CcccceEEE
Q 014904           37 EELARATDGFSDANLLGQGGFGYVHRGVLPN------GKEVAIKQLKAGSGQG-EREFQAEVEIISRVHH-KHLVSLVGY  108 (416)
Q Consensus        37 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h-~niv~l~~~  108 (416)
                      .+.+--.++|.+.+.||+|+||.||+|.+..      ++.||||+++...... .+.|.+|+.++.++.| ||||+++++
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            3334456789999999999999999998532      3689999998654433 4579999999999965 999999999


Q ss_pred             EEeC-CeEEEEEEecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccC
Q 014904          109 YTAG-SQRMLVYEFVPNNTLEFHLHGKG--------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKA  173 (416)
Q Consensus       109 ~~~~-~~~~lV~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp  173 (416)
                      |.+. ...+|||||+++|+|.++|+...              ...++|..++.|+.|+|+||+|||+.   +||||||||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~  213 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA  213 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence            9764 56899999999999999997532              23589999999999999999999999   999999999


Q ss_pred             CcEEECCCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCc
Q 014904          174 ANILLDFKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHT  251 (416)
Q Consensus       174 ~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~  251 (416)
                      +||||+.++.+||+|||+|+........ ..+...||+.|+|||++.++.++.++|||||||+||||+| |+.||.....
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999976544333 3455789999999999999999999999999999999998 9999976442


Q ss_pred             ccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          252 FVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .  ..        +...+..|.-     +.    .+..++..+.+++.+||+.||++||+|.||++.|+..
T Consensus       294 ~--~~--------~~~~i~~g~~-----~~----~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          294 D--EE--------FCRRLKEGTR-----MR----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             S--HH--------HHHHHHHTCC-----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H--HH--------HHHHHHcCCC-----CC----CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            1  11        1122223321     11    1222345788999999999999999999999999753


No 12 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.8e-52  Score=402.27  Aligned_cols=244  Identities=25%  Similarity=0.392  Sum_probs=197.0

Q ss_pred             CcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEe----CCeEEEEE
Q 014904           47 SDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTA----GSQRMLVY  119 (416)
Q Consensus        47 ~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~  119 (416)
                      ...+.||+|+||.||+|.+ .+++.||||++....  ....+.|.+|+.++++++|||||+++++|.+    ....+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5567899999999999995 468999999997543  2334579999999999999999999999875    34579999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeecccCCcEEECC-CCceEEeecccceecc
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK--IIHRDIKAANILLDF-KFEAKVADFGLAKIAS  196 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--iiHrDIkp~NILl~~-~~~~kl~DFGla~~~~  196 (416)
                      ||+++|+|.+++....  .+++..+..|+.|++.||+|||+.   +  ||||||||+||||+. ++.+||+|||+|+...
T Consensus       109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            9999999999997644  589999999999999999999998   6  999999999999985 7899999999998643


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ..   .....+||+.|+|||++. ++++.++|||||||+||||+||+.||......  ..        +...+..+....
T Consensus       184 ~~---~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~--~~--------~~~~i~~~~~~~  249 (290)
T 3fpq_A          184 AS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQ--------IYRRVTSGVKPA  249 (290)
T ss_dssp             TT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HH--------HHHHHTTTCCCG
T ss_pred             CC---ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH--HH--------HHHHHHcCCCCC
Confidence            32   234578999999999886 47999999999999999999999999754321  11        111222222111


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                          .+...    ....+.+|+.+||+.||++||++.|+++
T Consensus       250 ----~~~~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          250 ----SFDKV----AIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----GGGGC----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CCCcc----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                11111    2246889999999999999999999985


No 13 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.5e-51  Score=392.85  Aligned_cols=245  Identities=25%  Similarity=0.374  Sum_probs=192.1

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc---ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG---QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ++|++.+.||+|+||.||+|.. .+|+.||||++.....   .....+.+|+.++++++|||||++++++.+.+..++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999995 5799999999975432   23457899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+ +|+|.+++...+  .+++..+..++.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+|+......
T Consensus        93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred             eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence            999 678888887654  599999999999999999999999   99999999999999999999999999998765432


Q ss_pred             cceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                        .....+||+.|+|||++.+..+ +.++|||||||+||||+||+.||.....      ..     +.+.+..+.+.   
T Consensus       167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~-----~~~~i~~~~~~---  230 (275)
T 3hyh_A          167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PV-----LFKNISNGVYT---  230 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-----HHHHHHHTCCC---
T ss_pred             --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HH-----HHHHHHcCCCC---
Confidence              2344689999999999988775 5899999999999999999999976432      11     11222233221   


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                         +..    .....+.+++.+||+.||++|||+.|+++
T Consensus       231 ---~p~----~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          231 ---LPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             ---CCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ---CCC----CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence               111    22356889999999999999999999986


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.4e-51  Score=398.30  Aligned_cols=242  Identities=25%  Similarity=0.297  Sum_probs=194.9

Q ss_pred             CCCCcCceecccCcEEEEEEEeC----CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ++|++.+.||+|+||.||+|...    +++.||||+++....  .....+.+|+.++++++|||||++++++.+....+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999852    478999999975422  223468889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++|+|.+++...+  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+|+....
T Consensus       104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            999999999999997654  599999999999999999999999   999999999999999999999999999986544


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      ... .....+||+.|+|||++.+..++.++|||||||+||||+||+.||......   .+       + ..+..+.+.  
T Consensus       179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~~-------~-~~i~~~~~~--  244 (304)
T 3ubd_A          179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---ET-------M-TMILKAKLG--  244 (304)
T ss_dssp             --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH-------H-HHHHHCCCC--
T ss_pred             CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---HH-------H-HHHHcCCCC--
Confidence            332 234478999999999999999999999999999999999999999765431   11       1 112222211  


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRM  312 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~  312 (416)
                              ++......+.+|+.+||+.||++||++
T Consensus       245 --------~p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          245 --------MPQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             --------CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             --------CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence                    112234578899999999999999985


No 15 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=9.1e-50  Score=388.42  Aligned_cols=290  Identities=48%  Similarity=0.819  Sum_probs=251.4

Q ss_pred             ccccCHHHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEE
Q 014904           31 KSTFTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYY  109 (416)
Q Consensus        31 ~~~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~  109 (416)
                      ...|++.++..++++|.+.++||+|+||.||+|...+|+.||||++...... ....+.+|+.+++.++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            4579999999999999999999999999999999888999999999765322 223689999999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEe
Q 014904          110 TAGSQRMLVYEFVPNNTLEFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVA  187 (416)
Q Consensus       110 ~~~~~~~lV~e~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~  187 (416)
                      ......++||||+.+++|.+++....  ...+++..++.|+.+++.||+|||+.+.++|+||||||+|||++.++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            99999999999999999999997653  3359999999999999999999999988899999999999999999999999


Q ss_pred             ecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCC--cccchhhhhhhhHHh
Q 014904          188 DFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTH--TFVEDSLVDWARPLL  265 (416)
Q Consensus       188 DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~--~~~~~~l~~~~~~~~  265 (416)
                      |||+++..............||+.|+|||++.++.++.++||||||+++|+|++|+.||+...  ......+.+|...  
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--  254 (326)
T 3uim_A          177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG--  254 (326)
T ss_dssp             CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT--
T ss_pred             cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH--
Confidence            999999877666666666779999999999998999999999999999999999999996321  1123344455433  


Q ss_pred             HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          266 NRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       266 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                        .........+.+..+...+...+...+.+++.+||+.+|.+||++.||++.|++...
T Consensus       255 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          255 --LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             --TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             --HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence              334567778888888888999999999999999999999999999999999997643


No 16 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.6e-49  Score=386.34  Aligned_cols=286  Identities=39%  Similarity=0.687  Sum_probs=249.6

Q ss_pred             ccccCHHHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEE
Q 014904           31 KSTFTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT  110 (416)
Q Consensus        31 ~~~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  110 (416)
                      ...+++.++..++++|...++||+|+||.||+|.+.+++.||||++........+.+.+|+.++++++||||+++++++.
T Consensus        26 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  105 (321)
T 2qkw_B           26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD  105 (321)
T ss_dssp             ----CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred             ceeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            44577778889999999999999999999999998889999999998776666678999999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEee
Q 014904          111 AGSQRMLVYEFVPNNTLEFHLHGKGR--PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVAD  188 (416)
Q Consensus       111 ~~~~~~lV~e~~~~~sL~~~l~~~~~--~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~D  188 (416)
                      +....++||||+++++|.+++.....  ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D  182 (321)
T 2qkw_B          106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITD  182 (321)
T ss_dssp             CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECC
T ss_pred             CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEee
Confidence            99999999999999999999975542  3589999999999999999999999   999999999999999999999999


Q ss_pred             cccceeccCCC-cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHH
Q 014904          189 FGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNR  267 (416)
Q Consensus       189 FGla~~~~~~~-~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  267 (416)
                      ||+++...... ........||+.|+|||++.++.++.++||||||+++|||++|+.||....+.....+..|....   
T Consensus       183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~---  259 (321)
T 2qkw_B          183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES---  259 (321)
T ss_dssp             CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH---
T ss_pred             cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc---
Confidence            99998754322 22334467899999999999999999999999999999999999999887766666666665433   


Q ss_pred             hhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          268 AIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       268 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                       ...+.+..++++.+...........+.+++.+||+.+|++||++.||++.|+...
T Consensus       260 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          260 -HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             -HTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -cccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence             3456777888888888888899999999999999999999999999999998653


No 17 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=9.6e-50  Score=385.58  Aligned_cols=249  Identities=23%  Similarity=0.389  Sum_probs=189.8

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEEEeCC--------
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYYTAGS--------  113 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  113 (416)
                      ++|.+.+.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.++++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4588999999999999999995 47999999999765433 3357899999999999999999999987544        


Q ss_pred             ----eEEEEEEecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEee
Q 014904          114 ----QRMLVYEFVPNNTLEFHLHGKGR-PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVAD  188 (416)
Q Consensus       114 ----~~~lV~e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~D  188 (416)
                          ..++||||+++++|.+++..... ...++..++.|+.|++.||+|||+.   +||||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999986543 2456778899999999999999999   999999999999999999999999


Q ss_pred             cccceeccCCCcc-----------eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhh
Q 014904          189 FGLAKIASDVNTH-----------VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSL  257 (416)
Q Consensus       189 FGla~~~~~~~~~-----------~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l  257 (416)
                      ||+|+........           ..+..+||+.|+|||++.+..++.++|||||||+||||++   ||....    +..
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~  234 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERV  234 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHH
Confidence            9999876543221           1233579999999999999999999999999999999996   664311    000


Q ss_pred             hhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          258 VDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      .     .+ ..+....+...         .......+.+++.+||+.||.+||++.||++
T Consensus       235 ~-----~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          235 R-----TL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             H-----HH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H-----HH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0     01 11122222111         1122345678999999999999999999986


No 18 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2e-47  Score=383.16  Aligned_cols=261  Identities=20%  Similarity=0.306  Sum_probs=201.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEe------CC
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTA------GS  113 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~  113 (416)
                      .++|.+.+.||+|+||.||+|.+ .+|+.||||+++....  ...+.+.+|+.+|++++|||||++++++..      ..
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            36799999999999999999995 5799999999975432  223568899999999999999999999764      35


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..||||||+. |+|.+++...+  .+++..+..++.|++.||.|||+.   +||||||||+|||++.++.+||+|||+++
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceee
Confidence            7899999995 67888886544  699999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCC---cceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhh
Q 014904          194 IASDVN---THVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAI  269 (416)
Q Consensus       194 ~~~~~~---~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  269 (416)
                      .+....   .......+||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+  ..     . 
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I--~~-----~-  278 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI--MM-----V-  278 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH--HH-----H-
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH--HH-----h-
Confidence            664322   2233457899999999998775 5799999999999999999999999875532111111  00     0 


Q ss_pred             hcCCcccc----------------cCccccC---cCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          270 EDGNFDTL----------------VDPKLHN---EYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       270 ~~~~~~~~----------------~d~~l~~---~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                       .|.....                ..+....   .........+.+|+.+||+.||.+|||+.|+++.
T Consensus       279 -~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          279 -LGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             -HCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -cCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence             0100000                0000000   0001123467899999999999999999998863


No 19 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=6.8e-47  Score=374.97  Aligned_cols=205  Identities=23%  Similarity=0.373  Sum_probs=175.8

Q ss_pred             HHHHHHhhCCCCcCceecccCcEEEEEEEeC----CCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEE
Q 014904           36 YEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYT  110 (416)
Q Consensus        36 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  110 (416)
                      |+.+-...++|.+.++||+|+||.||+|..+    +++.||||++....  ...++.+|+.++..+ +|||||++++++.
T Consensus        13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~   90 (361)
T 4f9c_A           13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFR   90 (361)
T ss_dssp             HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred             HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence            3444557789999999999999999999853    46889999987543  345788999999998 6999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC-CceEEeec
Q 014904          111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK-FEAKVADF  189 (416)
Q Consensus       111 ~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~-~~~kl~DF  189 (416)
                      +.++.++||||+++++|.+++.     .+++..+..++.|++.||+|||+.   +|+||||||+||||+.+ +.+||+||
T Consensus        91 ~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF  162 (361)
T 4f9c_A           91 KNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF  162 (361)
T ss_dssp             ETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             ECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence            9999999999999999999984     489999999999999999999999   99999999999999877 79999999


Q ss_pred             ccceeccCCCcc---------------------------eeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHh
Q 014904          190 GLAKIASDVNTH---------------------------VSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELIT  241 (416)
Q Consensus       190 Gla~~~~~~~~~---------------------------~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~ellt  241 (416)
                      |+|+...+....                           ..+..+||+.|+|||++.+. .++.++||||+||++|||++
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~  242 (361)
T 4f9c_A          163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS  242 (361)
T ss_dssp             TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence            999865432211                           12335799999999999875 58999999999999999999


Q ss_pred             CCCCCCCCC
Q 014904          242 GRRPVDSTH  250 (416)
Q Consensus       242 G~~pf~~~~  250 (416)
                      |+.||....
T Consensus       243 G~~Pf~~~~  251 (361)
T 4f9c_A          243 GRYPFYKAS  251 (361)
T ss_dssp             TCSSSSCCS
T ss_pred             CCCCCCCCC
Confidence            999996544


No 20 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=1.9e-46  Score=392.80  Aligned_cols=252  Identities=23%  Similarity=0.333  Sum_probs=210.3

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||++..........+.+|+.+|+.++|||||++++++.+....+|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            46899999999999999999995 47999999999876655567789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC--CceEEeecccceeccCCC
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK--FEAKVADFGLAKIASDVN  199 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~--~~~kl~DFGla~~~~~~~  199 (416)
                      +.+|+|.+++..... .+++..+..++.|++.||.|||+.   +|+||||||+||||+.+  +.+||+|||+++......
T Consensus       236 ~~gg~L~~~i~~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          236 MSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             CCCCBHHHHHTCTTS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred             cCCCcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence            999999998865433 699999999999999999999999   99999999999999854  889999999999875433


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                        .....+||+.|+|||++.+..++.++|||||||+||||++|+.||......   ..        ...+..+.+. + .
T Consensus       312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~---~~--------~~~i~~~~~~-~-~  376 (573)
T 3uto_A          312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ET--------LRNVKSCDWN-M-D  376 (573)
T ss_dssp             --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HH--------HHHHHTTCCC-C-C
T ss_pred             --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HH--------HHHHHhCCCC-C-C
Confidence              234467999999999999999999999999999999999999999765431   11        1112222211 1 1


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      +....    .....+.+|+.+||+.||.+||++.|+++
T Consensus       377 ~~~~~----~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          377 DSAFS----GISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             SGGGT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ccccc----CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11111    22346789999999999999999999986


No 21 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=3.4e-46  Score=360.94  Aligned_cols=259  Identities=26%  Similarity=0.402  Sum_probs=212.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      .++|.+.++||+|+||.||+|.+ .+++.||+|++........+.|.+|+.++.+++||||+++++++.++...++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            36788999999999999999996 46899999999776666667899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +++++|.+++..... .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        89 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           89 IKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             CTTCBHHHHHHHCCT-TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence            999999999986433 699999999999999999999999   9999999999999999999999999999876543322


Q ss_pred             ee-------------ecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHh
Q 014904          202 VS-------------TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRA  268 (416)
Q Consensus       202 ~~-------------~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  268 (416)
                      ..             ....||+.|+|||++.+..++.++||||||+++|||++|..|+............. .....   
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-~~~~~---  240 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-VRGFL---  240 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-HHHHH---
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-hhccc---
Confidence            11             14579999999999999999999999999999999999999987644322111110 00000   


Q ss_pred             hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          269 IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       269 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                                +..    .+...+..+.+++.+||+.+|++||++.+|++.|+...
T Consensus       241 ----------~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          241 ----------DRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             ----------HHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----------ccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                      000    11122346889999999999999999999999998543


No 22 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.2e-44  Score=349.10  Aligned_cols=281  Identities=36%  Similarity=0.666  Sum_probs=230.7

Q ss_pred             ccccCHHHHHHhhCCCCcC------ceecccCcEEEEEEEeCCCcEEEEEEeecCC----cccHHHHHHHHHHHHhcCCC
Q 014904           31 KSTFTYEELARATDGFSDA------NLLGQGGFGYVHRGVLPNGKEVAIKQLKAGS----GQGEREFQAEVEIISRVHHK  100 (416)
Q Consensus        31 ~~~f~~~el~~~t~~f~~~------~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~  100 (416)
                      ...|++.++.+++++|...      +.||+|+||.||+|.. +++.||||++....    ......+.+|+.++++++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999988      8999999999999997 68899999987532    22346789999999999999


Q ss_pred             cccceEEEEEeCCeEEEEEEecCCCCHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC
Q 014904          101 HLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGK-GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD  179 (416)
Q Consensus       101 niv~l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~  179 (416)
                      ||+++++++.+....++||||+++++|.+++... ....+++..++.|+.+++.||.|||+.   +|+||||||+||+++
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~  167 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD  167 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence            9999999999999999999999999999998643 234699999999999999999999999   999999999999999


Q ss_pred             CCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhh
Q 014904          180 FKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV  258 (416)
Q Consensus       180 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~  258 (416)
                      .++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||......  ..+.
T Consensus       168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~  244 (307)
T 2nru_A          168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLL  244 (307)
T ss_dssp             TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS--SBTT
T ss_pred             CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch--HHHH
Confidence            9999999999999876543322 2344679999999998864 6899999999999999999999999865432  1122


Q ss_pred             hhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          259 DWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .+.....   .....+...+++.+ ...+......+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       245 ~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          245 DIKEEIE---DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHH---TTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHhh---hhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            2211110   01222333444443 345667788999999999999999999999999999864


No 23 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1e-44  Score=353.35  Aligned_cols=263  Identities=22%  Similarity=0.335  Sum_probs=219.1

Q ss_pred             ccccCHHHHHHhhCC----------CCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCC
Q 014904           31 KSTFTYEELARATDG----------FSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHH   99 (416)
Q Consensus        31 ~~~f~~~el~~~t~~----------f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h   99 (416)
                      ...|+++++..+++.          |...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            346899999999986          667789999999999999965 799999999987776667789999999999999


Q ss_pred             CcccceEEEEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC
Q 014904          100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD  179 (416)
Q Consensus       100 ~niv~l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~  179 (416)
                      |||+++++++......++||||+++++|.+++...   .+++..++.++.|++.||.|||+.   +|+||||||+|||++
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~  175 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLT  175 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC
Confidence            99999999999999999999999999999998643   589999999999999999999999   999999999999999


Q ss_pred             CCCceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhh
Q 014904          180 FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVD  259 (416)
Q Consensus       180 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~  259 (416)
                      .++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......   ... 
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~-  250 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAM-  250 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHH-
T ss_pred             CCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH-
Confidence            9999999999999876543322 24467999999999999999999999999999999999999999764431   111 


Q ss_pred             hhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          260 WARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                             ..+.......+.       ........+.+++.+||+.+|++||++.||++.
T Consensus       251 -------~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          251 -------KRLRDSPPPKLK-------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             -------HHHHHSSCCCCT-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -------HHHhcCCCCCcC-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   111111111110       111223568899999999999999999999864


No 24 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.2e-45  Score=387.72  Aligned_cols=249  Identities=24%  Similarity=0.334  Sum_probs=200.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC---cccHHHHHH---HHHHHHhcCCCcccceEEEEEeCCeE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS---GQGEREFQA---EVEIISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      .++|.+.++||+|+||.||+|.. .+|+.||||++.+..   ......+.+   ++.+++.++|||||++++++.+....
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            36799999999999999999995 469999999997432   122233333   45666778999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ||||||++||+|..+|...+  .+++..+..++.||+.||.|||+.   +||||||||+||||+.+|.+||+|||+|+..
T Consensus       268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence            99999999999999997654  599999999999999999999999   9999999999999999999999999999876


Q ss_pred             cCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ....   ....+||+.|+|||++.. ..++.++|||||||+||||++|+.||..........+.        ..+....+
T Consensus       343 ~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~--------~~i~~~~~  411 (689)
T 3v5w_A          343 SKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--------RMTLTMAV  411 (689)
T ss_dssp             SSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH--------HHHHHCCC
T ss_pred             CCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--------HhhcCCCC
Confidence            5433   234689999999999975 47999999999999999999999999754332111111        11111111


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPR-----MSQIVR  317 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt-----~~evv~  317 (416)
                            .    ++......+.+|+.+||+.||.+|++     +.||++
T Consensus       412 ------~----~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          412 ------E----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             ------C----CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             ------C----CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                  1    12223457889999999999999998     677764


No 25 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.3e-44  Score=348.58  Aligned_cols=251  Identities=23%  Similarity=0.386  Sum_probs=211.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++..........+.+|+.++++++||||+++++++......++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46899999999999999999994 57899999999876666667889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +.+++|.+++...   .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++.........
T Consensus        99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  172 (297)
T 3fxz_A           99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (297)
T ss_dssp             CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence            9999999999764   489999999999999999999999   9999999999999999999999999999876544332


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCcc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPK  281 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~  281 (416)
                       .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .+.        .....+. ..+    
T Consensus       173 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~--------~~~~~~~-~~~----  236 (297)
T 3fxz_A          173 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALY--------LIATNGT-PEL----  236 (297)
T ss_dssp             -BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHH--------HHHHHCS-CCC----
T ss_pred             -cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHH--------HHHhCCC-CCC----
Confidence             334679999999999999999999999999999999999999997654311  110        0111111 111    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          282 LHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       282 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                         ..+......+.+++.+||+.||++||++.|+++.
T Consensus       237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          237 ---QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             ---SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ---CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence               1112234578899999999999999999999863


No 26 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.6e-45  Score=357.23  Aligned_cols=263  Identities=31%  Similarity=0.454  Sum_probs=205.2

Q ss_pred             HHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCccc--HHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           37 EELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQG--EREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        37 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      .++....++|++.+.||+|+||.||+|.. +|+.||||++.......  ...+.+|+.++++++||||+++++++.+...
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            33444567899999999999999999987 68899999997654332  3578899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeecccCCcEEECCCCceEEeeccc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGR-PTMDWLTRLKIALGSAKGLAYLHEDCHPK--IIHRDIKAANILLDFKFEAKVADFGL  191 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--iiHrDIkp~NILl~~~~~~kl~DFGl  191 (416)
                      .++||||+++++|.+++..... ..+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.+||+|||+
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~  185 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGL  185 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence            9999999999999999976532 2489999999999999999999998   8  99999999999999999999999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      ++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   ......       ...
T Consensus       186 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~---~~~~~~-------~~~  254 (309)
T 3p86_A          186 SRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---QVVAAV-------GFK  254 (309)
T ss_dssp             -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---HHHHHH-------HHS
T ss_pred             Ccccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH-------Hhc
Confidence            986543221 223467999999999999999999999999999999999999999765431   111100       001


Q ss_pred             CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          272 GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ...         ...+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       255 ~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          255 CKR---------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI  297 (309)
T ss_dssp             CCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            110         1112223357899999999999999999999999998654


No 27 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.8e-45  Score=347.14  Aligned_cols=255  Identities=30%  Similarity=0.452  Sum_probs=212.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEec
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV  122 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  122 (416)
                      .++|.+.+.||+|+||.||+|.+.+++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            36788999999999999999998889999999998654 34567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcce
Q 014904          123 PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV  202 (416)
Q Consensus       123 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~  202 (416)
                      ++++|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||+++.........
T Consensus        88 ~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  163 (269)
T 4hcu_A           88 EHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  163 (269)
T ss_dssp             TTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred             CCCcHHHHHHhcCc-ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence            99999999975443 689999999999999999999999   99999999999999999999999999998665433333


Q ss_pred             eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCcc
Q 014904          203 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPK  281 (416)
Q Consensus       203 ~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~  281 (416)
                      .....+|+.|+|||++.+..++.++||||||+++++|++ |+.||......   .+.        ..+..+.  ...   
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~--------~~~~~~~--~~~---  227 (269)
T 4hcu_A          164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVV--------EDISTGF--RLY---  227 (269)
T ss_dssp             TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHH--------HHHHTTC--CCC---
T ss_pred             ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHH--------HHHhcCc--cCC---
Confidence            334567888999999999999999999999999999999 99999764431   111        1111211  011   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          282 LHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       282 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                          .+......+.+++.+||+.+|++||++.|+++.|+..
T Consensus       228 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          228 ----KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence                1111235788999999999999999999999999854


No 28 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=7.1e-45  Score=361.62  Aligned_cols=258  Identities=26%  Similarity=0.409  Sum_probs=211.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC--------CCcEEEEEEeecCCcc-cHHHHHHHHHHHHhc-CCCcccceEEEEEeC
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP--------NGKEVAIKQLKAGSGQ-GEREFQAEVEIISRV-HHKHLVSLVGYYTAG  112 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  112 (416)
                      .++|.+.+.||+|+||.||+|.+.        ++..||||+++..... ....+.+|+.++.++ +||||++++++|.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467889999999999999999852        3567999999865432 235789999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE
Q 014904          113 SQRMLVYEFVPNNTLEFHLHGKGR--------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL  178 (416)
Q Consensus       113 ~~~~lV~e~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl  178 (416)
                      ...++||||+++++|.+++.....              ..+++..++.++.|++.||.|||+.   +|+||||||+||||
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence            999999999999999999976432              3589999999999999999999999   99999999999999


Q ss_pred             CCCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchh
Q 014904          179 DFKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDS  256 (416)
Q Consensus       179 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~  256 (416)
                      +.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....   ..
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~---~~  313 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---EE  313 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG---GG
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH---HH
Confidence            99999999999999876543322 2233567889999999999999999999999999999999 9999976442   11


Q ss_pred             hhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          257 LVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       257 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      +.        ..+..+...         ..+......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       314 ~~--------~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          314 LF--------KLLKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HH--------HHHHTTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HH--------HHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            11        111222211         112233457899999999999999999999999998653


No 29 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.4e-45  Score=365.45  Aligned_cols=257  Identities=28%  Similarity=0.458  Sum_probs=199.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC----CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      .++|.+.++||+|+||.||+|.+.    ++..||||+++.... ...+.|.+|+.++.+++||||+++++++.+....++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            358999999999999999999964    577899999986532 334679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|.+++.... ..+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            999999999999997654 3699999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCccee--ecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          198 VNTHVS--TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       198 ~~~~~~--~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ......  ....+++.|+|||++.+..++.++|||||||++|||++ |+.||.....   ..+.        ..+..+. 
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~---~~~~--------~~i~~~~-  267 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVI--------KAVDEGY-  267 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH---HHHH--------HHHHTTE-
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH---HHHH--------HHHHcCC-
Confidence            332221  22345778999999999999999999999999999998 9999976432   1111        1111111 


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                              ....+...+..+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       268 --------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          268 --------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             --------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence                    01112234467899999999999999999999999998653


No 30 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=3.5e-45  Score=357.25  Aligned_cols=256  Identities=29%  Similarity=0.444  Sum_probs=207.6

Q ss_pred             CCCCcCceecccCcEEEEEEEeC----CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ++|.+.++||+|+||.||+|.+.    .+..||||+++.... ...+.|.+|+.++++++||||+++++++.+....++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            46778899999999999999964    345699999986533 3345789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++..... .+++..++.|+.+++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       129 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             EECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred             eeCCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence            999999999999975533 699999999999999999999999   9999999999999999999999999999877543


Q ss_pred             Ccce--eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          199 NTHV--STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       199 ~~~~--~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ....  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+.        ..+..+.. 
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~--------~~~~~~~~-  272 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVI--------SSVEEGYR-  272 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHH--------HHHHTTCC-
T ss_pred             ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHH--------HHHHcCCC-
Confidence            3222  223456788999999999999999999999999999999 99999764431   111        11112210 


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                              ...+......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       273 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          273 --------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                    1112233457899999999999999999999999998653


No 31 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-44  Score=356.80  Aligned_cols=252  Identities=21%  Similarity=0.342  Sum_probs=200.8

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ...++|.+.+.||+|+||.||+|.+ .+|+.||||++...... ....+.+|+.++++++||||+++++++......++|
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv   86 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV   86 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence            4568999999999999999999995 57999999999765422 234688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++......
T Consensus        87 ~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  161 (347)
T 3zgw_A           87 LEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN  161 (347)
T ss_dssp             EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred             EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence            99999999999986554  589999999999999999999999   9999999999999999999999999998866544


Q ss_pred             CcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .........||+.|+|||++.+..+ +.++|||||||+||+|++|+.||.....      ....     ..+..+.+.  
T Consensus       162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------~~~~-----~~i~~~~~~--  228 (347)
T 3zgw_A          162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV------MALY-----KKIMRGKYD--  228 (347)
T ss_dssp             ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-----HHHHHTCCC--
T ss_pred             CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH------HHHH-----HHHHcCCCC--
Confidence            4434455679999999999988775 8999999999999999999999976432      1111     112223221  


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                          +..    .....+.+++.+||+.||.+||++.||++.
T Consensus       229 ----~p~----~~s~~~~~li~~~L~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          229 ----VPK----WLSPSSILLLQQMLQVDPKKRISMKNLLNH  261 (347)
T ss_dssp             ----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ----CCC----CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence                111    123467889999999999999999999864


No 32 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=6.1e-45  Score=344.34  Aligned_cols=257  Identities=27%  Similarity=0.416  Sum_probs=214.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ..++|.+.+.||+|+||.||+|...++..||||+++.... ...++.+|+.++.+++||||+++++++.+....++||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            3468999999999999999999988888999999986543 356789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +++++|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||++.........
T Consensus        85 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  160 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV  160 (268)
T ss_dssp             CTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred             cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence            999999999975432 589999999999999999999999   9999999999999999999999999999877654444


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDP  280 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~  280 (416)
                      ......+|+.|+|||.+.+..++.++||||||+++++|++ |+.||.......   .        ...+..+..  ...+
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~--------~~~~~~~~~--~~~~  227 (268)
T 3sxs_A          161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE---V--------VLKVSQGHR--LYRP  227 (268)
T ss_dssp             ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH---H--------HHHHHTTCC--CCCC
T ss_pred             cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH---H--------HHHHHcCCC--CCCC
Confidence            3344556788999999998899999999999999999999 999997654311   0        011111211  1111


Q ss_pred             cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          281 KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       281 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                             ......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       228 -------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          228 -------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             -------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             -------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence                   112346889999999999999999999999998643


No 33 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=3.6e-44  Score=344.96  Aligned_cols=260  Identities=23%  Similarity=0.369  Sum_probs=207.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc---HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG---EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++.......   .+.+.+|+.++.+++||||+++++++.+....++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            47899999999999999999995 468999999986543333   35788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++...+  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            99999999999997654  589999999999999999999999   9999999999999999999999999999876554


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      .........||+.|+|||.+.+..++.++||||||+++|+|++|+.||.......          .....+.. ...   
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~----------~~~~~~~~-~~~---  230 (294)
T 4eqm_A          165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS----------IAIKHIQD-SVP---  230 (294)
T ss_dssp             ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH----------HHHHHHSS-CCC---
T ss_pred             cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH----------HHHHHhhc-cCC---
Confidence            4344445679999999999999999999999999999999999999997654310          01111111 111   


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHhcccc
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRP-RMSQIVRALEGDA  323 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-t~~evv~~L~~~~  323 (416)
                        ..........+..+.+++.+|++.+|.+|| ++.++.+.|+...
T Consensus       231 --~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          231 --NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             --CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             --CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence              111112223345789999999999999999 9999999998643


No 34 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.7e-44  Score=351.67  Aligned_cols=272  Identities=25%  Similarity=0.339  Sum_probs=209.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCC----eEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGS----QRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l  117 (416)
                      ..++|.+.++||+|+||.||+|... ++.||||++.... .....+..|+.++.+++||||+++++++....    ..++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3478999999999999999999974 7999999997543 22345567888999999999999999998744    4799


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeeeecccCCcEEECCCCceEEeecc
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-------HPKIIHRDIKAANILLDFKFEAKVADFG  190 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-------~~~iiHrDIkp~NILl~~~~~~kl~DFG  190 (416)
                      ||||+++++|.+++...   .+++..++.|+.|++.||+|||+.+       .++|+||||||+|||++.++.+||+|||
T Consensus       100 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence            99999999999999764   4999999999999999999999862       3479999999999999999999999999


Q ss_pred             cceeccCCCcc-eeecccccccccChhhhccC-----CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh---
Q 014904          191 LAKIASDVNTH-VSTRVMGTFGYLAPEYASSG-----KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA---  261 (416)
Q Consensus       191 la~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~-----~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~---  261 (416)
                      +++........ ......||+.|+|||++.+.     .++.++|||||||++|||++|+.||...............   
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  256 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH  256 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence            99876543332 22336799999999999863     5567899999999999999999999765432211111110   


Q ss_pred             --hHHhHHhhhcCCcccccCccccCc-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          262 --RPLLNRAIEDGNFDTLVDPKLHNE-YNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       262 --~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                        ...+.........    .+.+... .....+..+.+++.+||+.||++||++.||++.|+..
T Consensus       257 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          257 PSLEDMQEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             CCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CchhhhhhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              0011111111111    1111111 1234567799999999999999999999999999854


No 35 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=4.6e-45  Score=347.96  Aligned_cols=256  Identities=25%  Similarity=0.372  Sum_probs=209.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ..++|.+.+.||+|+||.||+|.+.++..||||+++... ....++.+|+.++.+++|+||+++++++.+....++||||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            356899999999999999999999888899999998654 3456799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +++++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++........
T Consensus       101 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  176 (283)
T 3gen_A          101 MANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT  176 (283)
T ss_dssp             CTTCBHHHHHHCGGG-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred             cCCCcHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence            999999999976332 599999999999999999999999   9999999999999999999999999999866543322


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDP  280 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~  280 (416)
                      ......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......   ...        ..+..+..     .
T Consensus       177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~--------~~~~~~~~-----~  240 (283)
T 3gen_A          177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETA--------EHIAQGLR-----L  240 (283)
T ss_dssp             STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHH--------HHHHTTCC-----C
T ss_pred             cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHH--------HHHhcccC-----C
Confidence            2333456788999999999999999999999999999998 99999765431   111        11111110     0


Q ss_pred             cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          281 KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       281 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .    .+......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       241 ~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          241 Y----RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             C----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C----CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            1    1111235788999999999999999999999999753


No 36 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=3.5e-44  Score=351.07  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=209.2

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ....++|.+.+.||+|+||.||+|.+ .+|+.||||++....  ......+.+|+.+++.++||||+++++++......+
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            34567899999999999999999996 679999999997543  233456889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|.+++...+  .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        91 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            9999999999999987654  589999999999999999999999   99999999999999999999999999998665


Q ss_pred             CCCcceeecccccccccChhhhccCCCC-chhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLT-EKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t-~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ...  ......||+.|+|||++.+..+. .++|||||||++|+|++|+.||......      .     +...+..+.+.
T Consensus       166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~-----~~~~i~~~~~~  232 (328)
T 3fe3_A          166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------E-----LRERVLRGKYR  232 (328)
T ss_dssp             SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-----HHHHHHHCCCC
T ss_pred             CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------H-----HHHHHHhCCCC
Confidence            432  23446799999999999888765 8999999999999999999999765431      1     11112223221


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                                .+......+.+++.+||+.||.+||++.|+++.
T Consensus       233 ----------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          233 ----------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             ----------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             ----------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                      111223468899999999999999999999864


No 37 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=6.1e-45  Score=358.77  Aligned_cols=268  Identities=27%  Similarity=0.385  Sum_probs=215.6

Q ss_pred             ccCHHHHHHhhCCCCcCceecccCcEEEEEEEe------CCCcEEEEEEeecCCcc-cHHHHHHHHHHHHhc-CCCcccc
Q 014904           33 TFTYEELARATDGFSDANLLGQGGFGYVHRGVL------PNGKEVAIKQLKAGSGQ-GEREFQAEVEIISRV-HHKHLVS  104 (416)
Q Consensus        33 ~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~  104 (416)
                      .+...+..-..++|.+.+.||+|+||.||+|.+      .+++.||||+++..... ..+.+.+|+.++.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            345556666789999999999999999999973      24689999999865433 335789999999999 7999999


Q ss_pred             eEEEEEeCCe-EEEEEEecCCCCHHHHhhcCCC-----------------------------------------------
Q 014904          105 LVGYYTAGSQ-RMLVYEFVPNNTLEFHLHGKGR-----------------------------------------------  136 (416)
Q Consensus       105 l~~~~~~~~~-~~lV~e~~~~~sL~~~l~~~~~-----------------------------------------------  136 (416)
                      +++++.+... .++||||+++++|.+++.....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            9999987554 8999999999999999976532                                               


Q ss_pred             -----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          137 -----------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       137 -----------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                                       ..+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                             1289999999999999999999999   99999999999999999999999999998664433


Q ss_pred             c-ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          200 T-HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       200 ~-~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      . .......||+.|+|||++.+..++.++|||||||++|||++ |+.||......  ..+        ...+..+.... 
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~--------~~~~~~~~~~~-  316 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEF--------CRRLKEGTRMR-  316 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--HHH--------HHHHHHTCCCC-
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--HHH--------HHHHHcCCCCC-
Confidence            2 23345678999999999999999999999999999999998 99999765431  111        11112221111 


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                              .+......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       317 --------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          317 --------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence                    1112235788999999999999999999999999854


No 38 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-44  Score=352.97  Aligned_cols=265  Identities=25%  Similarity=0.401  Sum_probs=216.2

Q ss_pred             HHHHHHhhCCCCcCceecccCcEEEEEEEeC------CCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEE
Q 014904           36 YEELARATDGFSDANLLGQGGFGYVHRGVLP------NGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGY  108 (416)
Q Consensus        36 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~  108 (416)
                      +.++.-..++|.+.+.||+|+||.||+|...      +++.||||+++..... ....+.+|+.++++++||||++++++
T Consensus        39 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  118 (343)
T 1luf_A           39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV  118 (343)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3445556789999999999999999999964      3489999999865432 34578999999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 014904          109 YTAGSQRMLVYEFVPNNTLEFHLHGKG----------------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKI  166 (416)
Q Consensus       109 ~~~~~~~~lV~e~~~~~sL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~i  166 (416)
                      +.+....++||||+++++|.+++....                      ...+++..++.|+.|++.||.|||+.   +|
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i  195 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF  195 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            999999999999999999999997642                      14689999999999999999999999   99


Q ss_pred             eeecccCCcEEECCCCceEEeecccceeccCCCc-ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCC
Q 014904          167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRR  244 (416)
Q Consensus       167 iHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~  244 (416)
                      +||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.
T Consensus       196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999986543222 22234568999999999999999999999999999999999 999


Q ss_pred             CCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          245 PVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       245 pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ||.....   ..+        ...+..+....         .+...+..+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       276 p~~~~~~---~~~--------~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          276 PYYGMAH---EEV--------IYYVRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             TTTTSCH---HHH--------HHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cCCCCCh---HHH--------HHHHhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            9976432   111        11222333211         11223457899999999999999999999999998754


No 39 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=7.9e-45  Score=374.87  Aligned_cols=258  Identities=26%  Similarity=0.376  Sum_probs=216.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCC-CcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ...+|.+.+.||+|+||.||+|.+.. +..||||+++... ....+|.+|+.++++++||||++++++|......++|||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            45678889999999999999999754 8899999998654 346789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+++++|.+++.......+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++.......
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence            99999999999876666799999999999999999999999   999999999999999999999999999987654333


Q ss_pred             ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                      .......++..|+|||++.++.++.++|||||||+||||++ |+.||......   .+.        ..+..+.      
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~--------~~~~~~~------  436 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVY--------ELLEKDY------  436 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHH--------HHHHTTC------
T ss_pred             eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHH--------HHHHcCC------
Confidence            32333456789999999999999999999999999999999 99999765431   111        1111111      


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                         ....+..++..+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       437 ---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          437 ---RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence               11122234467899999999999999999999999998643


No 40 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=5.8e-45  Score=349.55  Aligned_cols=267  Identities=24%  Similarity=0.355  Sum_probs=207.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-----CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-----PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA--GSQR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  115 (416)
                      .++|++.+.||+|+||.||+|..     .+++.||||++........+.+.+|+.++.+++||||+++++++..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            46889999999999999999984     3688999999987665556789999999999999999999999865  3568


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ++||||+++++|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             EEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            999999999999999976543 589999999999999999999999   9999999999999999999999999999876


Q ss_pred             cCCCcc--eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchh-----hhhhhhHHhHHh
Q 014904          196 SDVNTH--VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDS-----LVDWARPLLNRA  268 (416)
Q Consensus       196 ~~~~~~--~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~-----l~~~~~~~~~~~  268 (416)
                      ......  ......++..|+|||.+.+..++.++||||||+++|||++|..|+..........     ...+....+...
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (295)
T 3ugc_A          165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL  244 (295)
T ss_dssp             -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred             cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence            543322  2233457788999999999999999999999999999999999986532100000     000000011111


Q ss_pred             hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          269 IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       269 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      +..+.         ....+...+..+.+++.+||+.+|++||++.||++.|+..
T Consensus       245 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          245 LKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            11111         1112223446799999999999999999999999999853


No 41 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=6.1e-45  Score=347.70  Aligned_cols=258  Identities=27%  Similarity=0.380  Sum_probs=217.7

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ...++|.+.+.||+|+||.||+|.+. +++.||||++.... .....+.+|+.++++++||||+++++++.+....++||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            35678999999999999999999965 48899999997543 34567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+.+++|.+++.......+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            999999999999876666799999999999999999999999   99999999999999999999999999998776554


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      ........+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......   .+..        .+..+.     
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~--------~~~~~~-----  229 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYE--------LLEKDY-----  229 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH--------HHHTTC-----
T ss_pred             cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH--------HHhccC-----
Confidence            444455667889999999999999999999999999999999 99999765431   1111        111111     


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                          ....+...+..+.+++.+||+.+|.+||++.||++.|+..
T Consensus       230 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          230 ----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence                0111222345789999999999999999999999999754


No 42 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=6.6e-45  Score=371.43  Aligned_cols=259  Identities=28%  Similarity=0.435  Sum_probs=214.4

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ....++|.+.+.||+|+||.||+|.+.+++.||||+++... ...+.|.+|+.++++++||||+++++++. ....++||
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~  261 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT  261 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence            44567899999999999999999999888999999998654 45678999999999999999999999986 56789999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++++|.+++.......+++..++.++.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++......
T Consensus       262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~  338 (454)
T 1qcf_A          262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  338 (454)
T ss_dssp             CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred             eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence            999999999999765444688999999999999999999999   99999999999999999999999999998764422


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      ........+|..|+|||++..+.++.++|||||||+||||++ |+.||.....   ..+.        ..+..+..  + 
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~---~~~~--------~~i~~~~~--~-  404 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVI--------RALERGYR--M-  404 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHH--------HHHHHTCC--C-
T ss_pred             eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH---HHHH--------HHHHcCCC--C-
Confidence            222233456788999999999999999999999999999999 9999976432   1111        11222210  1 


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                            ..+..++..+.+++.+||+.+|++||++.+|++.|+...
T Consensus       405 ------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          405 ------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             ------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence                  112234467899999999999999999999999999654


No 43 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=7.3e-44  Score=342.07  Aligned_cols=260  Identities=24%  Similarity=0.385  Sum_probs=204.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHh--cCCCcccceEEEEEe----CCeE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR--VHHKHLVSLVGYYTA----GSQR  115 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~  115 (416)
                      ..++|.+.+.||+|+||.||+|.. +++.||||++...   ....+..|.+++..  ++||||+++++++..    ....
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            457899999999999999999998 7899999998653   34566677777777  799999999999765    2458


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeeecccCCcEEECCCCceEEe
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH--------EDCHPKIIHRDIKAANILLDFKFEAKVA  187 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~iiHrDIkp~NILl~~~~~~kl~  187 (416)
                      ++||||+++++|.++++..   .+++..++.|+.|++.||+|||        +.   +|+||||||+|||++.++.+||+
T Consensus        82 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEe
Confidence            9999999999999999543   5999999999999999999999        66   99999999999999999999999


Q ss_pred             ecccceeccCCCcce---eecccccccccChhhhccC------CCCchhhhHhHHHHHHHHHhC----------CCCCCC
Q 014904          188 DFGLAKIASDVNTHV---STRVMGTFGYLAPEYASSG------KLTEKSDVFSFGVMLLELITG----------RRPVDS  248 (416)
Q Consensus       188 DFGla~~~~~~~~~~---~~~~~gt~~YlaPE~~~~~------~~t~ksDV~SlGvvL~elltG----------~~pf~~  248 (416)
                      |||+++.........   .....||+.|+|||++.+.      .++.++|||||||++|||++|          +.||..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            999998765544332   2234799999999999876      455799999999999999999          777755


Q ss_pred             CCcccchhhhhhhhHHhHHhhhcCCcccccCcccc-CcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          249 THTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLH-NEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                      ...... .....     ........    ..+.+. ..........+.+++.+||+.+|.+||++.||++.|+.
T Consensus       236 ~~~~~~-~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          236 VVPNDP-SFEDM-----RKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             TSCSSC-CHHHH-----HHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCCc-chhhh-----hHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            332111 11111     01111111    111111 11234567889999999999999999999999999974


No 44 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=1.7e-44  Score=352.35  Aligned_cols=256  Identities=25%  Similarity=0.401  Sum_probs=202.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcE----EEEEEeecC-CcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKE----VAIKQLKAG-SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      .++|.+.++||+|+||.||+|.+. +++.    ||+|.+... .....++|.+|+.++++++||||++++++|.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            367999999999999999999953 4443    588887643 2344578999999999999999999999998765 77


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +|++|+.+++|.+++..... .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTT-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             EEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            89999999999999976543 699999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcce-eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          197 DVNTHV-STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       197 ~~~~~~-~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ...... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......   +.        ..+..+..
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~--------~~~~~~~~  237 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS--------SILEKGER  237 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH--------HHHHTTCC
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HH--------HHHHcCCC
Confidence            433322 233557889999999999999999999999999999999 999997654311   11        11122211


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                               ...+......+..++.+||+.+|.+||++.||++.|+...
T Consensus       238 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          238 ---------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             ---------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             ---------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                     1112223457889999999999999999999999998643


No 45 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=4.5e-43  Score=340.54  Aligned_cols=275  Identities=22%  Similarity=0.260  Sum_probs=216.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCC--eEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGS--QRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV  118 (416)
                      .++|.+.++||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            467999999999999999999965 58999999997543 233567889999999999999999999998755  78999


Q ss_pred             EEecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE----CCCCceEEeecccce
Q 014904          119 YEFVPNNTLEFHLHGKGR-PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL----DFKFEAKVADFGLAK  193 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl----~~~~~~kl~DFGla~  193 (416)
                      |||+++++|.+++..... ..+++..++.|+.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999976432 2499999999999999999999999   99999999999999    888889999999998


Q ss_pred             eccCCCcceeecccccccccChhhhc--------cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYAS--------SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL  265 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~--------~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~  265 (416)
                      ........  ....||+.|+|||++.        +..++.++|||||||++|||++|+.||........  ..+.....+
T Consensus       165 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~  240 (319)
T 4euu_A          165 ELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKII  240 (319)
T ss_dssp             ECCTTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHH
T ss_pred             ecCCCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHh
Confidence            76553322  3356999999999986        57889999999999999999999999975432111  111111111


Q ss_pred             HHh----------hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          266 NRA----------IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       266 ~~~----------~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                      ...          ...+.+....+..............+.+++.+||+.||++||++.|+++...++..
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            100          00000100001112234556778889999999999999999999999999987653


No 46 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.3e-44  Score=350.68  Aligned_cols=244  Identities=22%  Similarity=0.316  Sum_probs=193.8

Q ss_pred             CCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc--cHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ++|++.++||+|+||+||+|.+. +|+.||||++......  ....+..|+..+.++ +|+||++++++|.++...++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            68999999999999999999965 7999999998754322  223455566665555 8999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+ +++|.+++..... .+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||++.......
T Consensus       137 e~~-~~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             ECC-CCBHHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             ecc-CCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence            999 6788888765443 699999999999999999999999   99999999999999999999999999998765432


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                        ......||++|+|||++.+ .++.++|||||||++|||++|..|+.....        |      ..+..+...    
T Consensus       212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~------~~~~~~~~~----  270 (311)
T 3p1a_A          212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------W------QQLRQGYLP----  270 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------H------HHHTTTCCC----
T ss_pred             --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------H------HHHhccCCC----
Confidence              2234569999999998875 799999999999999999999877643211        1      111111111    


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      +.+..    .....+.+++.+||+.+|++||++.||++
T Consensus       271 ~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          271 PEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            11111    22357899999999999999999999985


No 47 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=1e-43  Score=362.23  Aligned_cols=251  Identities=29%  Similarity=0.424  Sum_probs=208.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCC-eEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGS-QRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||+|.+ .|+.||||+++...  ..+.|.+|+.++++++||||+++++++.... ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            456888899999999999999998 47899999998654  3467999999999999999999999988765 7899999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+++++|.+++...+...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... 
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-  343 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-  343 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-
Confidence            99999999999876655689999999999999999999999   99999999999999999999999999998543321 


Q ss_pred             ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                         ....++..|+|||++.+..++.++|||||||++|||++ |+.||......   .+.        ..+..+..     
T Consensus       344 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~--------~~i~~~~~-----  404 (450)
T 1k9a_A          344 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVV--------PRVEKGYK-----  404 (450)
T ss_dssp             ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT---THH--------HHHHTTCC-----
T ss_pred             ---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHH--------HHHHcCCC-----
Confidence               22357889999999999999999999999999999999 99999765431   111        11222211     


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                          ...+..++..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       405 ----~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          405 ----MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                112223446789999999999999999999999999853


No 48 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=4.6e-44  Score=349.14  Aligned_cols=253  Identities=24%  Similarity=0.372  Sum_probs=204.7

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .++|.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++.++...++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            478999999999999999999965 7899999999754432 23568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        86 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence            999999999986543  589999999999999999999999   999999999999999999999999999986643322


Q ss_pred             -ceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          201 -HVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       201 -~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                       .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... ......|..        ....   .
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~--------~~~~---~  228 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKE--------KKTY---L  228 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-SHHHHHHHT--------TCTT---S
T ss_pred             ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHHhc--------cccc---C
Confidence             22345679999999999987765 78999999999999999999999765431 111222211        1110   0


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .+      .......+.+++.+||+.+|.+||++.||++.
T Consensus       229 ~~------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          229 NP------WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             TT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             Cc------cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            00      11223567899999999999999999998764


No 49 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=8.1e-43  Score=345.93  Aligned_cols=252  Identities=25%  Similarity=0.349  Sum_probs=208.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ------GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||+++.....      ....+.+|+.++.+++||||+++++++.+...
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            5678999999999999999999964 6899999999865322      34678999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC----ceEEeecc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFG  190 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~----~~kl~DFG  190 (416)
                      .++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence            999999999999999996543  699999999999999999999999   999999999999998877    79999999


Q ss_pred             cceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          191 LAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       191 la~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      +++.......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......   .+.        ..+.
T Consensus       165 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---~~~--------~~i~  231 (361)
T 2yab_A          165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETL--------ANIT  231 (361)
T ss_dssp             SCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHH--------HHHH
T ss_pred             CceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHH--------HHHH
Confidence            9987654322  23467999999999999989999999999999999999999999764421   111        1111


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      .+.+.  .++....    .....+.+++.+||+.||.+||++.|+++
T Consensus       232 ~~~~~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          232 AVSYD--FDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             TTCCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hcCCC--CCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            22211  0111111    12346889999999999999999999885


No 50 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1.1e-44  Score=360.89  Aligned_cols=257  Identities=26%  Similarity=0.368  Sum_probs=209.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|.+. +++.||||+++..... ....|.+|+.++++++||||++++++|......++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3467888999999999999999975 7899999999854322 2346889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++++|.+++...+. .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       192 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~  267 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV  267 (377)
T ss_dssp             ECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred             EcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence            99999999999975432 589999999999999999999999   99999999999999999999999999998654322


Q ss_pred             ccee-ecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          200 THVS-TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       200 ~~~~-~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .... ....++..|+|||.+.++.++.++|||||||++|||++ |+.||.....   ....        ..+..+..  +
T Consensus       268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~---~~~~--------~~~~~~~~--~  334 (377)
T 3cbl_A          268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN---QQTR--------EFVEKGGR--L  334 (377)
T ss_dssp             EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH---HHHH--------HHHHTTCC--C
T ss_pred             eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHH--------HHHHcCCC--C
Confidence            1111 12345778999999999999999999999999999999 9999976442   1111        11222211  1


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                             ..+..++..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       335 -------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          335 -------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence                   11222345788999999999999999999999999753


No 51 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=6.4e-44  Score=337.61  Aligned_cols=253  Identities=26%  Similarity=0.430  Sum_probs=196.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc----ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG----QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.++||+|+||.||+|.+ .++.||||+++....    ...+.+.+|+.+++.++||||+++++++.+....++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            46899999999999999999997 488999999875432    2246788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC--------CCceEEeecc
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF--------KFEAKVADFG  190 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~--------~~~~kl~DFG  190 (416)
                      |||+++++|.+++...   .+++..++.++.|++.||.|||+....+|+||||||+|||++.        ++.+||+|||
T Consensus        85 ~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             EECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            9999999999998643   6899999999999999999999992222999999999999986        6789999999


Q ss_pred             cceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          191 LAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       191 la~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      +++.......   ....||+.|+|||++.+..++.++||||||+++++|++|+.||.......   .       . ....
T Consensus       162 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~-------~-~~~~  227 (271)
T 3dtc_A          162 LAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---V-------A-YGVA  227 (271)
T ss_dssp             C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH---H-------H-HHHH
T ss_pred             cccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---H-------H-Hhhh
Confidence            9986543322   23568999999999999999999999999999999999999997644211   0       0 0011


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                      .+...        ...+......+.+++.+||+.+|.+||++.||++.|+.
T Consensus       228 ~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          228 MNKLA--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             TSCCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             cCCCC--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            11111        11122334578999999999999999999999999974


No 52 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.7e-44  Score=356.28  Aligned_cols=259  Identities=26%  Similarity=0.402  Sum_probs=212.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC--------CCcEEEEEEeecCCcc-cHHHHHHHHHHHHhc-CCCcccceEEEEEe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP--------NGKEVAIKQLKAGSGQ-GEREFQAEVEIISRV-HHKHLVSLVGYYTA  111 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  111 (416)
                      ..++|.+.+.||+|+||.||+|...        .+..||||+++..... ....+.+|+.++.++ +||||++++++|..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3478999999999999999999952        2357999999865432 336788999999999 99999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEE
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHGKG--------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANIL  177 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NIL  177 (416)
                      ....++||||+++++|.+++....              ...+++..++.|+.|++.||.|||+.   +|+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence            999999999999999999997643              23589999999999999999999999   9999999999999


Q ss_pred             ECCCCceEEeecccceeccCCCc-ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccch
Q 014904          178 LDFKFEAKVADFGLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVED  255 (416)
Q Consensus       178 l~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~  255 (416)
                      |+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....   .
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~---~  300 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---E  300 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---H
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---H
Confidence            99999999999999987654332 22234567889999999999999999999999999999999 9999976442   1


Q ss_pred             hhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          256 SLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      .+.        ..+..+....         .+......+.+++.+||+.+|++||++.||++.|+...
T Consensus       301 ~~~--------~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          301 ELF--------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             HHH--------HHHHTTCCCC---------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHH--------HHHHcCCCCC---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111        1122222111         11123357899999999999999999999999998654


No 53 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=5.2e-44  Score=344.99  Aligned_cols=260  Identities=28%  Similarity=0.397  Sum_probs=213.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe------CCCcEEEEEEeecCCc-ccHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL------PNGKEVAIKQLKAGSG-QGEREFQAEVEIISRV-HHKHLVSLVGYYTAGS  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  113 (416)
                      ..++|.+.+.||+|+||.||+|.+      .+++.||||++..... ...+.+.+|+.++.++ +||||+++++++....
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            346899999999999999999984      3568999999986543 2346789999999999 9999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEE
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGR----------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANIL  177 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NIL  177 (416)
                      ..++||||+++++|.+++.....                ..+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence            99999999999999999976542                2489999999999999999999999   9999999999999


Q ss_pred             ECCCCceEEeecccceeccCCCcce-eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccch
Q 014904          178 LDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVED  255 (416)
Q Consensus       178 l~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~  255 (416)
                      ++.++.+||+|||+++......... .....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||......  .
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~  255 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD--S  255 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--H
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch--h
Confidence            9999999999999998765543322 234567889999999999999999999999999999999 99999765431  1


Q ss_pred             hhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          256 SLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      .+..        .+..+. .    +    ..+......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       256 ~~~~--------~~~~~~-~----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          256 KFYK--------MIKEGF-R----M----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             HHHH--------HHHHTC-C----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHH--------HhccCC-C----C----CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            1111        111111 1    0    111123457899999999999999999999999998643


No 54 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.2e-44  Score=349.79  Aligned_cols=260  Identities=24%  Similarity=0.385  Sum_probs=210.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe------CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL------PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGS  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  113 (416)
                      ..++|.+.+.||+|+||.||+|..      .+++.||||++.... ......+.+|+.++.++ +||||+++++++....
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            457899999999999999999995      245689999997543 22336789999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeeccc
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGR---------------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIK  172 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIk  172 (416)
                      ..++||||+++++|.+++.....                     ..+++..++.++.|++.||.|||+.   +|+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            99999999999999999976532                     2479999999999999999999999   99999999


Q ss_pred             CCcEEECCCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCC
Q 014904          173 AANILLDFKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTH  250 (416)
Q Consensus       173 p~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~  250 (416)
                      |+|||++.++.+||+|||++......... ......||+.|+|||.+.++.++.++||||||+++|+|+| |+.||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            99999999999999999999876544332 2344567889999999999999999999999999999998 999997654


Q ss_pred             cccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          251 TFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ..  ..+.        ..+..+..         ...+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       280 ~~--~~~~--------~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          280 VD--ANFY--------KLIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             CS--HHHH--------HHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             cH--HHHH--------HHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            31  1111        11112210         1111223457899999999999999999999999998643


No 55 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=2.4e-43  Score=342.01  Aligned_cols=266  Identities=21%  Similarity=0.291  Sum_probs=202.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|...+|+.||||++......  ....+.+|+.++++++||||+++++++.+....++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            45899999999999999999999988999999999754322  2357889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        99 e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           99 EFMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             ECCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             cCCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            99975 7777776543 3589999999999999999999999   99999999999999999999999999998765432


Q ss_pred             cceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhH------------
Q 014904          200 THVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLN------------  266 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~------------  266 (416)
                      .. .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......  .+..... .+.            
T Consensus       174 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~-~~~~~~~~~~~~~~~  249 (311)
T 3niz_A          174 RS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--QLPKIFS-ILGTPNPREWPQVQE  249 (311)
T ss_dssp             C----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--HHHHHHH-HHCCCCTTTSGGGTT
T ss_pred             cc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHH-HHCCCChHHhhhhhc
Confidence            22 233578999999999876 568999999999999999999999997654321  1111110 000            


Q ss_pred             -HhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          267 -RAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       267 -~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       .......+.. .+..............+.+++.+||+.||.+||++.|+++
T Consensus       250 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          250 LPLWKQRTFQV-FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             SHHHHSCCCCC-CCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cchhhhccccc-ccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence             0000001100 0000000001112347889999999999999999999986


No 56 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=5.6e-44  Score=344.92  Aligned_cols=258  Identities=26%  Similarity=0.397  Sum_probs=212.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe------CCCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL------PNGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      ..++|.+.+.||+|+||.||+|..      .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+...
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            357899999999999999999985      2458899999976432 334678899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeeccc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGR----------------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIK  172 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIk  172 (416)
                      .++||||+++++|.+++.....                      ..+++..++.++.|++.||.|||+.   +|+|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence            9999999999999999976432                      2489999999999999999999999   99999999


Q ss_pred             CCcEEECCCCceEEeecccceeccCCCcce-eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCC
Q 014904          173 AANILLDFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTH  250 (416)
Q Consensus       173 p~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~  250 (416)
                      |+|||++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999998765443322 233457889999999999899999999999999999999 999997654


Q ss_pred             cccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          251 TFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ..   .+.        ..+..+...         ..+......+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       258 ~~---~~~--------~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          258 PE---RLF--------NLLKTGHRM---------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             GG---GHH--------HHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH---HHH--------HHhhcCCcC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            31   111        111222211         11122345789999999999999999999999999854


No 57 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=9.4e-44  Score=350.74  Aligned_cols=254  Identities=24%  Similarity=0.331  Sum_probs=193.3

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..+.++|.+.+.||+|+||.||+|... +++.||||+++...  ..+.+.+|+.++.+++||||+++++++......++|
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence            446788999999999999999999965 58899999998543  345688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC---CCceEEeecccceec
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF---KFEAKVADFGLAKIA  195 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~---~~~~kl~DFGla~~~  195 (416)
                      |||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.   ++.+||+|||+++..
T Consensus       127 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          127 LELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             ECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             EEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            99999999999987543  589999999999999999999999   9999999999999975   889999999999866


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  ..+        ...+..+...
T Consensus       202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~--------~~~i~~~~~~  269 (349)
T 2w4o_A          202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--QFM--------FRRILNCEYY  269 (349)
T ss_dssp             -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--HHH--------HHHHHTTCCC
T ss_pred             Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--HHH--------HHHHHhCCCc
Confidence            4322  223467999999999999999999999999999999999999999754431  111        1111122211


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                       ...+     ........+.+++.+||+.||++||++.|+++.
T Consensus       270 -~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          270 -FISP-----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             -CCTT-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -cCCc-----hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             1111     112234578899999999999999999999863


No 58 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=3e-44  Score=341.55  Aligned_cols=257  Identities=29%  Similarity=0.435  Sum_probs=212.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ..++|.+.+.||+|+||.||+|...+++.||||++.... .....+.+|+.++++++||||+++++++.. ...++||||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~   88 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY   88 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence            457889999999999999999998888899999997654 345689999999999999999999999864 568899999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +++++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++.........
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence            9999999999754333689999999999999999999999   9999999999999999999999999999877654333


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDP  280 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~  280 (416)
                      ......++..|+|||.+.++.++.++||||||++++||++ |+.||.....   ..+.        ..+..+..     .
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~--------~~~~~~~~-----~  229 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN---PEVI--------QNLERGYR-----M  229 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHH--------HHHHTTCC-----C
T ss_pred             cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH---HHHH--------HHHhcccC-----C
Confidence            3334567889999999998899999999999999999999 9999876432   1111        11112210     1


Q ss_pred             cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          281 KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       281 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                          ..+......+.+++.+|++.+|++||++.+|++.|+...
T Consensus       230 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          230 ----VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence                111223457899999999999999999999999998643


No 59 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=3e-43  Score=345.79  Aligned_cols=249  Identities=23%  Similarity=0.334  Sum_probs=206.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecC---CcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAG---SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|... +|+.||||+++..   .......+..|+.++..++||||+++++++......++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            468999999999999999999964 6899999999753   223345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|..++....  .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        84 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            99999999999987543  589999999999999999999999   9999999999999999999999999999864332


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      .. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+   .     ..+..+..    
T Consensus       159 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~---~-----~~i~~~~~----  222 (337)
T 1o6l_A          159 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERL---F-----ELILMEEI----  222 (337)
T ss_dssp             TC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHH---H-----HHHHHCCC----
T ss_pred             CC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH---HHH---H-----HHHHcCCC----
Confidence            22 23446799999999999999999999999999999999999999976432   111   1     11111211    


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRP-----RMSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----t~~evv~~  318 (416)
                        .    ++......+.+++.+||+.+|.+||     ++.||++.
T Consensus       223 --~----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          223 --R----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             --C----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             --C----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence              1    1122335788999999999999999     89998864


No 60 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.1e-44  Score=367.57  Aligned_cols=257  Identities=30%  Similarity=0.418  Sum_probs=207.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ..++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.+ ...++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            457889999999999999999999888899999998654 345689999999999999999999999876 678999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +++++|.+++.......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus       260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  336 (452)
T 1fmk_A          260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  336 (452)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence            9999999999754444689999999999999999999999   9999999999999999999999999999876543333


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDP  280 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~  280 (416)
                      ......++..|+|||++.++.++.++|||||||+||||++ |+.||......   .+        ...+..+..      
T Consensus       337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~--------~~~i~~~~~------  399 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EV--------LDQVERGYR------  399 (452)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HH--------HHHHHTTCC------
T ss_pred             cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HH--------HHHHHcCCC------
Confidence            3334557889999999999999999999999999999999 99999764321   11        111222211      


Q ss_pred             cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          281 KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       281 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                         ...+..++..+.+++.+||+.+|++||++.+|++.|+...
T Consensus       400 ---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          400 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence               1112234467899999999999999999999999998654


No 61 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=2.3e-43  Score=344.37  Aligned_cols=260  Identities=19%  Similarity=0.214  Sum_probs=209.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++......  ..+..|+.+++++ +|+||+++++++......++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS--CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            347899999999999999999995 57899999998755332  3688999999999 9999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc-----eEEeeccccee
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE-----AKVADFGLAKI  194 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~-----~kl~DFGla~~  194 (416)
                      ||+ +++|.+++.... ..+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.     +||+|||+++.
T Consensus        85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             EeC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            999 999999997643 3699999999999999999999999   9999999999999998887     99999999987


Q ss_pred             ccCCCcce------eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHh
Q 014904          195 ASDVNTHV------STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRA  268 (416)
Q Consensus       195 ~~~~~~~~------~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  268 (416)
                      ........      .....||+.|+|||++.+..++.++|||||||++|||++|+.||................   ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~---~~~  236 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG---DTK  236 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHH---HHH
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHH---hhh
Confidence            65433321      235679999999999999999999999999999999999999998754322211111110   000


Q ss_pred             hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          269 IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       269 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .. -..     ..+..    ..+ .+.+++..|++.+|.+||++.+|++.|+..
T Consensus       237 ~~-~~~-----~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          237 RA-TPI-----EVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             HH-SCH-----HHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             cc-CCH-----HHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            00 000     00001    112 789999999999999999999999999743


No 62 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5e-44  Score=337.37  Aligned_cols=255  Identities=30%  Similarity=0.440  Sum_probs=211.9

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEec
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV  122 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  122 (416)
                      .++|.+.+.||+|+||.||+|...+++.||||++..... ..+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            367889999999999999999988889999999986543 4568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcce
Q 014904          123 PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHV  202 (416)
Q Consensus       123 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~  202 (416)
                      ++++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++.........
T Consensus        86 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  161 (267)
T 3t9t_A           86 EHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS  161 (267)
T ss_dssp             TTCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred             CCCcHHHHHhhCcc-cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence            99999999976533 689999999999999999999999   99999999999999999999999999998664432222


Q ss_pred             eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCcc
Q 014904          203 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPK  281 (416)
Q Consensus       203 ~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~  281 (416)
                      .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.....   ..+.        ..+..+..  ..   
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~--------~~i~~~~~--~~---  225 (267)
T 3t9t_A          162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---SEVV--------EDISTGFR--LY---  225 (267)
T ss_dssp             TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHH--------HHHHTTCC--CC---
T ss_pred             cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH---HHHH--------HHHhcCCc--CC---
Confidence            233567888999999998999999999999999999999 8999876432   1111        11112211  00   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          282 LHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       282 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                          .+......+.+++.+||+.+|.+||++.++++.|+..
T Consensus       226 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          226 ----KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                1112235788999999999999999999999999854


No 63 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=4.1e-43  Score=336.35  Aligned_cols=261  Identities=18%  Similarity=0.207  Sum_probs=211.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++.....  ...+.+|+.++.++ +|+|++++++++.+....++||
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            346899999999999999999995 5799999999875432  23678899999999 7999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc-----eEEeeccccee
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE-----AKVADFGLAKI  194 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~-----~kl~DFGla~~  194 (416)
                      ||+ +++|.+++...+. .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++.     +||+|||+++.
T Consensus        86 e~~-~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             Eec-CCCHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            999 9999999986543 599999999999999999999999   9999999999999987776     99999999987


Q ss_pred             ccCCCcc------eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHh
Q 014904          195 ASDVNTH------VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRA  268 (416)
Q Consensus       195 ~~~~~~~------~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  268 (416)
                      .......      ......||+.|+|||++.+..++.++||||||+++|||++|+.||..................    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----  236 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK----  236 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH----
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh----
Confidence            6554332      224467999999999999999999999999999999999999999875443222222111100    


Q ss_pred             hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          269 IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       269 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ......     +.+..    ..+..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       237 ~~~~~~-----~~~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          237 KQSTPL-----RELCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHHSCH-----HHHTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             ccCccH-----HHHHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            000000     00111    1235789999999999999999999999999854


No 64 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.3e-44  Score=367.53  Aligned_cols=265  Identities=20%  Similarity=0.242  Sum_probs=213.8

Q ss_pred             cCHHHHHHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc---ccHHHHHHHHHHHHhcCCCcccceEEEE
Q 014904           34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG---QGEREFQAEVEIISRVHHKHLVSLVGYY  109 (416)
Q Consensus        34 f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~  109 (416)
                      +.+.++...+++|.+.++||+|+||.||+|.+. +++.||||+++....   .....+.+|..++..++||||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            445667777899999999999999999999965 578999999975321   1122488999999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeec
Q 014904          110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF  189 (416)
Q Consensus       110 ~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DF  189 (416)
                      .+....+|||||+++++|.+++.... ..+++..+..++.|++.||.|||+.   +|+||||||+||||+.++.+||+||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF  219 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF  219 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence            99999999999999999999997643 2699999999999999999999999   9999999999999999999999999


Q ss_pred             ccceeccCCCcceeecccccccccChhhhc-----cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH
Q 014904          190 GLAKIASDVNTHVSTRVMGTFGYLAPEYAS-----SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL  264 (416)
Q Consensus       190 Gla~~~~~~~~~~~~~~~gt~~YlaPE~~~-----~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~  264 (416)
                      |+++.............+||+.|+|||++.     .+.++.++|||||||++|||++|+.||.......   .   ....
T Consensus       220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~---~---~~~i  293 (437)
T 4aw2_A          220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE---T---YGKI  293 (437)
T ss_dssp             TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HHHH
T ss_pred             hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH---H---HHhh
Confidence            999877665555555578999999999987     5678999999999999999999999998654311   1   1111


Q ss_pred             hHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 014904          265 LNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARR--RPRMSQIVRA  318 (416)
Q Consensus       265 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--RPt~~evv~~  318 (416)
                      +... ..-.     -|.....    ....+.+++.+||+.+|++  ||++.||++.
T Consensus       294 ~~~~-~~~~-----~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          294 MNHK-ERFQ-----FPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HTHH-HHCC-----CCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             hhcc-cccc-----CCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            1000 0001     1111111    2346888999999888888  9999999864


No 65 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-43  Score=344.06  Aligned_cols=253  Identities=18%  Similarity=0.301  Sum_probs=208.4

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++..++||||+++++++.+....++|||
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            4678999999999999999999964 68899999987543 334578899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC--CCceEEeecccceeccCC
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF--KFEAKVADFGLAKIASDV  198 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~--~~~~kl~DFGla~~~~~~  198 (416)
                      |+++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.  ++.+||+|||+++.....
T Consensus        82 ~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           82 FISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             eCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            999999999997543 3689999999999999999999999   9999999999999987  789999999999877543


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      .  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....   ..+.        ..+..+.+..  
T Consensus       158 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~--------~~i~~~~~~~--  222 (321)
T 1tki_A          158 D--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---QQII--------ENIMNAEYTF--  222 (321)
T ss_dssp             C--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHH--------HHHHHTCCCC--
T ss_pred             C--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH---HHHH--------HHHHcCCCCC--
Confidence            2  23446799999999999988899999999999999999999999976443   1111        1111222110  


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ++....    .....+.+++.+||+.+|.+||++.|+++.
T Consensus       223 ~~~~~~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          223 DEEAFK----EISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CHHHHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             Chhhhc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            000001    123578899999999999999999999974


No 66 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-44  Score=359.25  Aligned_cols=259  Identities=28%  Similarity=0.406  Sum_probs=209.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC------CCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP------NGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      .++|.+.+.||+|+||.||+|.+.      +++.||||+++... ......+..|+.++++++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            367889999999999999999943      46789999997543 33445788999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC---ceEEe
Q 014904          116 MLVYEFVPNNTLEFHLHGKG-----RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF---EAKVA  187 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~---~~kl~  187 (416)
                      ++||||+++++|.+++....     ...+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999997532     23589999999999999999999999   999999999999999554   59999


Q ss_pred             ecccceeccCCC-cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHh
Q 014904          188 DFGLAKIASDVN-THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLL  265 (416)
Q Consensus       188 DFGla~~~~~~~-~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~  265 (416)
                      |||+++...... ........||+.|+|||++.++.++.++|||||||++|||++ |+.||.....   ..+.       
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~---~~~~-------  296 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---QEVL-------  296 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHH-------
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHH-------
Confidence            999997543222 222344678999999999999999999999999999999998 9999976543   1111       


Q ss_pred             HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          266 NRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       266 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                       ..+..+...         ..+......+.+++.+||+.+|.+||++.+|++.|+....
T Consensus       297 -~~i~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          297 -EFVTSGGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             -HHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHHHcCCCC---------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence             111222211         1112234578899999999999999999999999986543


No 67 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.6e-43  Score=342.37  Aligned_cols=253  Identities=23%  Similarity=0.345  Sum_probs=207.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ------GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||++......      ....+.+|+.++++++||||+++++++.+...
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            3467999999999999999999964 6899999999764322      35679999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC----ceEEeecc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFG  190 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~----~~kl~DFG  190 (416)
                      .++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            999999999999999996543  699999999999999999999999   999999999999999887    79999999


Q ss_pred             cceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          191 LAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       191 la~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      +++.......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......  ..+.         .+.
T Consensus       164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~---------~~~  230 (326)
T 2y0a_A          164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLA---------NVS  230 (326)
T ss_dssp             TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHH---------HHH
T ss_pred             CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHH---------HHH
Confidence            9987654322  23457999999999999999999999999999999999999999764321  1110         011


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ..... + .+....    .....+.+++.+||+.+|.+||++.|+++.
T Consensus       231 ~~~~~-~-~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          231 AVNYE-F-EDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HTCCC-C-CHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hcCCC-c-Cccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11110 0 000001    123568899999999999999999999863


No 68 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=7.4e-44  Score=339.75  Aligned_cols=256  Identities=25%  Similarity=0.401  Sum_probs=197.6

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCC----CcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPN----GKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.+.||+|+||.||+|....    +..||||++..... ...+.+.+|+.++++++||||+++++++. ....+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence            45789999999999999999999643    45799999876433 23457899999999999999999999984 46788


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence            9999999999999997653 3689999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ...........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......   .+.        ..+..+...
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~~--------~~i~~~~~~  236 (281)
T 1mp8_A          168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVI--------GRIENGERL  236 (281)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHH--------HHHHTTCCC
T ss_pred             cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HHH--------HHHHcCCCC
Confidence            544333344567889999999999999999999999999999997 99999765431   111        111222211


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                           .    .+...+..+.+++.+||+.+|.+||++.||++.|+..
T Consensus       237 -----~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          237 -----P----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             -----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----C----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 1    1223345788999999999999999999999999854


No 69 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.9e-43  Score=348.60  Aligned_cols=213  Identities=25%  Similarity=0.314  Sum_probs=187.9

Q ss_pred             CccccCHHHHHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-----CCccc
Q 014904           30 SKSTFTYEELARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-----HKHLV  103 (416)
Q Consensus        30 ~~~~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv  103 (416)
                      ....|++.+.....++|.+.++||+|+||.||+|.. .+++.||||+++.. ......+..|+.++..+.     ||||+
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            345577777778899999999999999999999996 57899999999743 233456788999999996     99999


Q ss_pred             ceEEEEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC---
Q 014904          104 SLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF---  180 (416)
Q Consensus       104 ~l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~---  180 (416)
                      ++++++......++||||+ +++|.+++.......+++..++.++.|++.||+|||+.   +|+||||||+||||+.   
T Consensus       100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred             cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence            9999999999999999999 99999999876655799999999999999999999999   9999999999999975   


Q ss_pred             ----------------------CCceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHH
Q 014904          181 ----------------------KFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLE  238 (416)
Q Consensus       181 ----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~e  238 (416)
                                            ++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  251 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE  251 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence                                  7889999999998754422    34578999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCc
Q 014904          239 LITGRRPVDSTHT  251 (416)
Q Consensus       239 lltG~~pf~~~~~  251 (416)
                      |++|+.||.....
T Consensus       252 ll~g~~pf~~~~~  264 (360)
T 3llt_A          252 LYTGSLLFRTHEH  264 (360)
T ss_dssp             HHHSSCSCCCSSH
T ss_pred             HHHCCCCCCCCcH
Confidence            9999999986543


No 70 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=7.2e-44  Score=358.11  Aligned_cols=254  Identities=23%  Similarity=0.332  Sum_probs=194.9

Q ss_pred             hhCCCCcC-ceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHh-cCCCcccceEEEEEe----CCe
Q 014904           42 ATDGFSDA-NLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISR-VHHKHLVSLVGYYTA----GSQ  114 (416)
Q Consensus        42 ~t~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~  114 (416)
                      ..++|.+. ++||+|+||.||+|.+. +|+.||||+++..     ..+.+|+.++.+ .+||||+++++++..    ...
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            34566665 68999999999999964 6899999999632     356788888754 589999999999876    567


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC---CCceEEeeccc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF---KFEAKVADFGL  191 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~---~~~~kl~DFGl  191 (416)
                      .+|||||+++++|.+++.......+++..++.|+.|++.||.|||+.   +|+||||||+||||+.   ++.+||+|||+
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence            89999999999999999876656799999999999999999999999   9999999999999998   78899999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      ++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||..........       .....+..
T Consensus       211 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-------~~~~~i~~  281 (400)
T 1nxk_A          211 AKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIRM  281 (400)
T ss_dssp             CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-------SHHHHHHH
T ss_pred             ccccCCCCc--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-------HHHHHHHc
Confidence            986653222  234678999999999999999999999999999999999999997654321100       00111122


Q ss_pred             CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          272 GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      +.+. +..+.     .......+.+++.+||+.||.+||++.||++.
T Consensus       282 ~~~~-~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          282 GQYE-FPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TCCC-CCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             Cccc-CCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            2221 11111     11233578899999999999999999999975


No 71 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=348.43  Aligned_cols=252  Identities=22%  Similarity=0.356  Sum_probs=198.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCC--CcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHH--KHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.+.||+|+||.||++...+++.||||++.....  .....+.+|+.++.+++|  +||+++++++......++
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            3567999999999999999999988899999999976533  233578999999999976  999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||| +.+++|.+++....  .+++..+..|+.|++.||.|||+.   +|+||||||+|||++ ++.+||+|||+++....
T Consensus        87 v~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EEC-CCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             EEe-CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            999 56889999997654  589999999999999999999999   999999999999997 67899999999987654


Q ss_pred             CCcc-eeecccccccccChhhhcc-----------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh
Q 014904          198 VNTH-VSTRVMGTFGYLAPEYASS-----------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL  265 (416)
Q Consensus       198 ~~~~-~~~~~~gt~~YlaPE~~~~-----------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~  265 (416)
                      .... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||......    ...     +
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~-----~  230 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----ISK-----L  230 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----HHH-----H
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH----HHH-----H
Confidence            3332 2345679999999999865           67899999999999999999999999753321    100     0


Q ss_pred             HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          266 NRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       266 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ..         ++++.....++......+.+++.+||+.+|.+||++.||++.
T Consensus       231 ~~---------~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          231 HA---------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HH---------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HH---------HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            01         111111122222233578899999999999999999999865


No 72 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=8e-44  Score=336.04  Aligned_cols=251  Identities=20%  Similarity=0.315  Sum_probs=206.3

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAG--SQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|.+ +++.||||+++....  ...+.+.+|+.++++++||||+++++++.+.  ...++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            46899999999999999999998 488999999986542  3345789999999999999999999999886  778999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeecccCCcEEECCCCceEEeecccceecc
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK--IIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      |||+++++|.+++.......+++..++.|+.|++.||.|||+.   +  |+||||||+||+++.++.++|+|||+.....
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~  164 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ  164 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence            9999999999999877666799999999999999999999998   7  9999999999999999999999998875432


Q ss_pred             CCCcceeecccccccccChhhhccCCCCc---hhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCC
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTE---KSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGN  273 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~---ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~  273 (416)
                      .      ....||+.|+|||.+.+...+.   ++||||||+++|||++|+.||.......          ........+.
T Consensus       165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------~~~~~~~~~~  228 (271)
T 3kmu_A          165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----------IGMKVALEGL  228 (271)
T ss_dssp             C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----------HHHHHHHSCC
T ss_pred             c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----------HHHHHHhcCC
Confidence            2      2346899999999998765444   8999999999999999999997644211          0111111111


Q ss_pred             cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          274 FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       274 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                           .+.    .+......+.+++.+||+.+|++||++.||++.|+..
T Consensus       229 -----~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          229 -----RPT----IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             -----CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence                 111    1222345789999999999999999999999999853


No 73 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=5.7e-43  Score=349.41  Aligned_cols=272  Identities=17%  Similarity=0.261  Sum_probs=206.4

Q ss_pred             hhCCCCcCceeccc--CcEEEEEEEeC-CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQG--GFGYVHRGVLP-NGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G--~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.++||+|  +||.||+|... +|+.||||++.....  .....+.+|+.++++++||||+++++++.+....+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34689999999999  99999999965 799999999975432  22356888999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|.+++.......+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||++....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~  179 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred             EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence            999999999999999876555799999999999999999999999   99999999999999999999999999986543


Q ss_pred             CCCc------ceeecccccccccChhhhcc--CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHh
Q 014904          197 DVNT------HVSTRVMGTFGYLAPEYASS--GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRA  268 (416)
Q Consensus       197 ~~~~------~~~~~~~gt~~YlaPE~~~~--~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  268 (416)
                      ....      .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.......  .+.......+...
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~  257 (389)
T 3gni_B          180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPCL  257 (389)
T ss_dssp             ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT--HHHHC--------
T ss_pred             cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHhcCCCCcc
Confidence            2211      11122478999999999987  579999999999999999999999997644311  1111000000000


Q ss_pred             hh------------------cCCcccccC---c------cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          269 IE------------------DGNFDTLVD---P------KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       269 ~~------------------~~~~~~~~d---~------~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ..                  .......+.   +      .....+.......+.+|+.+||+.||.+||++.|+++.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            00                  000000000   0      00001222334578999999999999999999999854


No 74 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=7.5e-43  Score=334.58  Aligned_cols=267  Identities=19%  Similarity=0.264  Sum_probs=201.4

Q ss_pred             CCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ++|.+.+.||+|+||+||+|... +++.||||++......  ....+.+|+.++++++||||+++++++.+....++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57999999999999999999964 6899999999865432  23678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+.++.+..+....  ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        82 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  156 (292)
T 3o0g_A           82 FCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             CCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred             cCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence            99865444444322  2599999999999999999999999   999999999999999999999999999987653322


Q ss_pred             ceeecccccccccChhhhccCC-CCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhH-------HhhhcC
Q 014904          201 HVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLN-------RAIEDG  272 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~-~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------~~~~~~  272 (416)
                       ......||+.|+|||++.+.. ++.++|||||||++++|++|+.||..... ..+.+.........       ......
T Consensus       157 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (292)
T 3o0g_A          157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-HHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             -cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-HHHHHHHHHHHhCCCChhhhhhhcccc
Confidence             223457899999999998765 89999999999999999999888644332 11111111110000       000000


Q ss_pred             Ccc---cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          273 NFD---TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       273 ~~~---~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      .+.   ..................+.+++.+||+.||++||++.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            000   000000011112234457889999999999999999999985


No 75 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=8.8e-43  Score=348.78  Aligned_cols=254  Identities=21%  Similarity=0.329  Sum_probs=209.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||+|++..........+.+|+.++..++||||+++++++.+....++|||
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            3578999999999999999999964 689999999987665556688999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC--CCceEEeecccceeccCC
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF--KFEAKVADFGLAKIASDV  198 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~--~~~~kl~DFGla~~~~~~  198 (416)
                      |+.+++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.  ++.+||+|||+++.....
T Consensus       129 ~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          129 FLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             cCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            999999999987543 3689999999999999999999999   9999999999999974  477999999999876543


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      ..  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...        ..+..+.+.  .
T Consensus       205 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~--------~~i~~~~~~--~  269 (387)
T 1kob_A          205 EI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETL--------QNVKRCDWE--F  269 (387)
T ss_dssp             SC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHH--------HHHHHCCCC--C
T ss_pred             cc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHH--------HHHHhCCCC--C
Confidence            32  23457999999999999999999999999999999999999999764421   111        111111111  1


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ++..    .......+.+++.+||+.+|.+||++.|+++.
T Consensus       270 ~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          270 DEDA----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             CSST----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             Cccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            1111    11234578899999999999999999999864


No 76 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=4.9e-43  Score=334.59  Aligned_cols=252  Identities=33%  Similarity=0.581  Sum_probs=203.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccH-------HHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGE-------REFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      .++|.+.+.||+|+||.||+|.+ .+++.||||++........       +.+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            37899999999999999999996 5789999999875433221       57889999999999999999999987655 


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeecccCCcEEECCCCc-----eEEe
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK--IIHRDIKAANILLDFKFE-----AKVA  187 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--iiHrDIkp~NILl~~~~~-----~kl~  187 (416)
                       ++||||+++++|.+.+..... .+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.     +||+
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             -eEEEEecCCCCHHHHHhcccC-CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence             699999999999888865543 699999999999999999999998   8  999999999999988776     9999


Q ss_pred             ecccceeccCCCcceeecccccccccChhhh--ccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh
Q 014904          188 DFGLAKIASDVNTHVSTRVMGTFGYLAPEYA--SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL  265 (416)
Q Consensus       188 DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~--~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~  265 (416)
                      |||+++....    ......||+.|+|||++  ....++.++||||||+++|||++|+.||........ .....     
T Consensus       172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~-----  241 (287)
T 4f0f_A          172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINM-----  241 (287)
T ss_dssp             CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHH-----
T ss_pred             CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHH-----
Confidence            9999975433    23346799999999998  445678999999999999999999999976543111 11110     


Q ss_pred             HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          266 NRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       266 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                         ......        ....+......+.+++.+||+.+|.+||++.||++.|+.
T Consensus       242 ---~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          242 ---IREEGL--------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             ---HHHSCC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             ---HhccCC--------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence               111111        111222334578999999999999999999999999974


No 77 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.1e-42  Score=337.03  Aligned_cols=258  Identities=29%  Similarity=0.491  Sum_probs=202.4

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .++|.+.+.||+|+||.||+|.+.  ..+|+|+++....  ...+.+.+|+.++++++||||+++++++.. ...++|+|
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e  111 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence            478999999999999999999864  3589999876433  233578999999999999999999998754 56789999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC-C
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV-N  199 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~-~  199 (416)
                      |+.+++|.+++..... .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..... .
T Consensus       112 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~  187 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CCSSCBHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred             cCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence            9999999999975433 699999999999999999999999   9999999999999999999999999999865432 2


Q ss_pred             cceeecccccccccChhhhc---cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          200 THVSTRVMGTFGYLAPEYAS---SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~---~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ........||+.|+|||++.   +..++.++|||||||++|||++|+.||......  +.+.        ..+..+..  
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~--~~~~--------~~~~~~~~--  255 (307)
T 3lb7_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQII--------FMVGRGYA--  255 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHH--------HHHHHTCC--
T ss_pred             cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH--HHHH--------HHHhcCCC--
Confidence            22234467999999999986   667899999999999999999999999765431  1111        11111111  


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                        .+.+ ......++..+.+++.+||+.+|++||++.||++.|+..
T Consensus       256 --~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l  298 (307)
T 3lb7_A          256 --SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             --CCCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred             --Ccch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence              1111 111122345789999999999999999999999999854


No 78 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=4.8e-43  Score=347.54  Aligned_cols=255  Identities=24%  Similarity=0.365  Sum_probs=208.4

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ....++|.+.+.||+|+||.||+|... +|+.||||++......  ....+.+|+.++++++||||+++++++.+....+
T Consensus        25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  104 (362)
T 2bdw_A           25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY  104 (362)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            345678999999999999999999964 6899999999865432  2356889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC---ceEEeecccce
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF---EAKVADFGLAK  193 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~---~~kl~DFGla~  193 (416)
                      +||||+++++|.+.+....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++   .+||+|||++.
T Consensus       105 lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          105 LVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             EEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            9999999999999886543  589999999999999999999999   999999999999998654   59999999998


Q ss_pred             eccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCC
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGN  273 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~  273 (416)
                      .......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....   ..+.        ..+..+.
T Consensus       180 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~---~~~~--------~~i~~~~  246 (362)
T 2bdw_A          180 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLY--------AQIKAGA  246 (362)
T ss_dssp             CCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH--------HHHHHTC
T ss_pred             EecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHH--------HHHHhCC
Confidence            7654322  2346799999999999998999999999999999999999999976432   1111        1122232


Q ss_pred             cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          274 FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       274 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      +.. ..+.     .......+.+++.+||+.+|.+||++.|+++.
T Consensus       247 ~~~-~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          247 YDY-PSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CCC-CTTG-----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCC-Cccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            211 1111     01223578899999999999999999999864


No 79 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=8e-43  Score=335.36  Aligned_cols=250  Identities=21%  Similarity=0.293  Sum_probs=198.4

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc--------------------------cHHHHHHHHHHH
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ--------------------------GEREFQAEVEII   94 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--------------------------~~~~~~~E~~~l   94 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++......                          ....+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            357899999999999999999995 46899999999754321                          124688999999


Q ss_pred             HhcCCCcccceEEEEEe--CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeeccc
Q 014904           95 SRVHHKHLVSLVGYYTA--GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIK  172 (416)
Q Consensus        95 ~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIk  172 (416)
                      ++++||||+++++++.+  ....++||||+++++|.+++..   ..+++..++.++.|++.||+|||+.   +|+|||||
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk  164 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK  164 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence            99999999999999987  6689999999999999876543   3699999999999999999999999   99999999


Q ss_pred             CCcEEECCCCceEEeecccceeccCCCcceeecccccccccChhhhccCC---CCchhhhHhHHHHHHHHHhCCCCCCCC
Q 014904          173 AANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGK---LTEKSDVFSFGVMLLELITGRRPVDST  249 (416)
Q Consensus       173 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~---~t~ksDV~SlGvvL~elltG~~pf~~~  249 (416)
                      |+|||++.++.+||+|||+++....... ......||+.|+|||.+.+..   .+.++|||||||++|+|++|+.||...
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            9999999999999999999987654332 233467999999999997665   378999999999999999999999754


Q ss_pred             CcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          250 HTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ..      ..+.     ..+..+....   + ...    .....+.+++.+||+.+|++||++.||++
T Consensus       244 ~~------~~~~-----~~~~~~~~~~---~-~~~----~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          244 RI------MCLH-----SKIKSQALEF---P-DQP----DIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SH------HHHH-----HHHHHCCCCC---C-SSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cH------HHHH-----HHHhcccCCC---C-Ccc----ccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            32      1111     1111121110   0 011    12347899999999999999999999874


No 80 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=9.2e-44  Score=358.41  Aligned_cols=260  Identities=22%  Similarity=0.277  Sum_probs=210.2

Q ss_pred             HHHHHHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 014904           36 YEELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTA  111 (416)
Q Consensus        36 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  111 (416)
                      +.++....++|.+.++||+|+||.||+|... +++.||+|+++...   ......+.+|+.++..++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            3455566789999999999999999999965 58999999997521   1112357899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccc
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGL  191 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGl  191 (416)
                      ....++||||+++++|.+++...   .+++..+..++.+++.||.|||+.   +|+||||||+||||+.++.+||+|||+
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence            99999999999999999999754   489999999999999999999999   999999999999999999999999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCC----CCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHH
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGK----LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNR  267 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~----~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  267 (416)
                      ++.............+||+.|+|||++.+..    ++.++|||||||++|||++|+.||......      .....++..
T Consensus       215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~  288 (410)
T 3v8s_A          215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNH  288 (410)
T ss_dssp             CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTH
T ss_pred             eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhc
Confidence            9877654444445678999999999997655    789999999999999999999999765431      111111100


Q ss_pred             hhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 014904          268 AIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARR--RPRMSQIVRA  318 (416)
Q Consensus       268 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--RPt~~evv~~  318 (416)
                      .. .-.+     |. ..    .....+.+++.+||+.+|.+  ||++.||++.
T Consensus       289 ~~-~~~~-----p~-~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          289 KN-SLTF-----PD-DN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HH-HCCC-----CT-TC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             cc-cccC-----CC-cc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            00 0000     10 01    12347889999999999998  9999999975


No 81 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=6.7e-43  Score=347.88  Aligned_cols=246  Identities=23%  Similarity=0.341  Sum_probs=198.0

Q ss_pred             CceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEecCCCCH
Q 014904           49 ANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTL  127 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~~sL  127 (416)
                      .++||+|+||.||+|.. .+|+.||||+++.........+.+|+.++.+++||||+++++++.+....+|||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56899999999999995 56899999999876656667899999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE--CCCCceEEeecccceeccCCCcceeec
Q 014904          128 EFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL--DFKFEAKVADFGLAKIASDVNTHVSTR  205 (416)
Q Consensus       128 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl--~~~~~~kl~DFGla~~~~~~~~~~~~~  205 (416)
                      .+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||+  +.++.+||+|||+++.......  ...
T Consensus       174 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~  247 (373)
T 2x4f_A          174 FDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKV  247 (373)
T ss_dssp             HHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCC
T ss_pred             HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--ccc
Confidence            98886543 2589999999999999999999999   99999999999999  6678899999999987654332  233


Q ss_pred             ccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCc
Q 014904          206 VMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNE  285 (416)
Q Consensus       206 ~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~  285 (416)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......  ..+..    .     ....+. +.. .... 
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~----i-----~~~~~~-~~~-~~~~-  313 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--ETLNN----I-----LACRWD-LED-EEFQ-  313 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH----H-----HHTCCC-SCS-GGGT-
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH----H-----HhccCC-CCh-hhhc-
Confidence            56999999999999999999999999999999999999999765431  11111    1     111111 001 1111 


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          286 YNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       286 ~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                         .....+.+++.+||+.+|.+||++.|+++
T Consensus       314 ---~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          314 ---DISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             ---TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence               12357899999999999999999999997


No 82 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=6e-43  Score=334.81  Aligned_cols=266  Identities=21%  Similarity=0.324  Sum_probs=200.7

Q ss_pred             CCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ++|.+.+.||+|+||.||+|...+|+.||||++......  ....+.+|+.++++++||||+++++++......++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            578999999999999999999988999999999754322  235788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +.+ +|.+++.... ..+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus        82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  155 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-  155 (288)
T ss_dssp             CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence            975 8888886543 3689999999999999999999999   999999999999999999999999999986543222 


Q ss_pred             eeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh-------HHhhhcCC
Q 014904          202 VSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL-------NRAIEDGN  273 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~-------~~~~~~~~  273 (416)
                      ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +.+.......-       ....+...
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T 1ob3_A          156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMRIFRILGTPNSKNWPNVTELPK  233 (288)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHHCCCChhhchhhhcccc
Confidence            22335689999999999764 5899999999999999999999999765431  11111110000       00000000


Q ss_pred             ccc---ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          274 FDT---LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       274 ~~~---~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      +..   ...+.............+.+++.+||+.||++||++.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000   00000001111223457889999999999999999999985


No 83 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.6e-43  Score=343.78  Aligned_cols=263  Identities=25%  Similarity=0.361  Sum_probs=196.3

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEEeCC-Cc---EEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGVLPN-GK---EVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTA  111 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~-g~---~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  111 (416)
                      ++....++|.+.+.||+|+||.||+|.+.. ++   .||||+++...  ....+.+.+|+.++++++||||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            333456789999999999999999999644 32   79999997652  3334679999999999999999999999987


Q ss_pred             CCeE------EEEEEecCCCCHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC
Q 014904          112 GSQR------MLVYEFVPNNTLEFHLHGKG----RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK  181 (416)
Q Consensus       112 ~~~~------~lV~e~~~~~sL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~  181 (416)
                      ....      ++|+||+.+++|.+++....    ...+++..++.|+.|++.||+|||+.   +|+||||||+|||++.+
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED  173 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence            6655      99999999999999885422    22589999999999999999999999   99999999999999999


Q ss_pred             CceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhh
Q 014904          182 FEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVD  259 (416)
Q Consensus       182 ~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~  259 (416)
                      +.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......   .+. 
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~-  249 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---EIY-  249 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHH-
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---HHH-
Confidence            99999999999866443322 2233457889999999999999999999999999999999 99999765431   111 


Q ss_pred             hhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          260 WARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                             ..+..+...         ..+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       250 -------~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          250 -------NYLIGGNRL---------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             -------HHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------HHHhcCCCC---------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                   111111111         111223457899999999999999999999999998643


No 84 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2.6e-43  Score=349.00  Aligned_cols=266  Identities=18%  Similarity=0.217  Sum_probs=205.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCC------CcEEEEEEeecCCcccH-----------HHHHHHHHHHHhcCCCcccc
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPN------GKEVAIKQLKAGSGQGE-----------REFQAEVEIISRVHHKHLVS  104 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~  104 (416)
                      ..++|.+.++||+|+||.||+|.+..      ++.||||++........           ..+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            46799999999999999999999754      47899999886543211           12334556677788999999


Q ss_pred             eEEEEEeC----CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC-
Q 014904          105 LVGYYTAG----SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD-  179 (416)
Q Consensus       105 l~~~~~~~----~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~-  179 (416)
                      +++++...    ...++||||+ +++|.+++.... ..+++..++.|+.|++.||+|||+.   +|+||||||+||||+ 
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY  187 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence            99998774    4589999999 999999997643 3699999999999999999999999   999999999999999 


Q ss_pred             -CCCceEEeecccceeccCCCcce------eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcc
Q 014904          180 -FKFEAKVADFGLAKIASDVNTHV------STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTF  252 (416)
Q Consensus       180 -~~~~~kl~DFGla~~~~~~~~~~------~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~  252 (416)
                       .++.+||+|||+++.........      .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... 
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~-  266 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK-  266 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-
Confidence             88999999999998765432221      1334599999999999999999999999999999999999999975322 


Q ss_pred             cchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          253 VEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       253 ~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                       ......+.....     ...+..++++.+..   ...+..+.+++..||+.+|.+||++.+|++.|+..
T Consensus       267 -~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          267 -DPKYVRDSKIRY-----RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             -CHHHHHHHHHHH-----HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHh-----hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence             122222211111     11122222222211   12235789999999999999999999999999854


No 85 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=3.1e-43  Score=347.86  Aligned_cols=248  Identities=27%  Similarity=0.365  Sum_probs=200.7

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  117 (416)
                      .++|.+.++||+|+||.||+|... +|+.||||+++...   ......+..|..++..+ +||||+++++++.+....++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            478999999999999999999964 68999999997532   22335678899999988 79999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|..++....  .+++..+..++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++....
T Consensus       102 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~  176 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC  176 (353)
T ss_dssp             EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence            999999999999997654  589999999999999999999999   999999999999999999999999999985432


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+       + ..+..+.+   
T Consensus       177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~-------~-~~i~~~~~---  241 (353)
T 3txo_A          177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DL-------F-EAILNDEV---  241 (353)
T ss_dssp             ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH-------H-HHHHHCCC---
T ss_pred             CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HH-------H-HHHHcCCC---
Confidence            22 2234467999999999999889999999999999999999999999765431   11       1 11112221   


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCH------HHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRM------SQIVR  317 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~------~evv~  317 (416)
                             .++......+.+++.+||+.+|.+||++      .||++
T Consensus       242 -------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          242 -------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             -------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                   1112233568899999999999999998      66664


No 86 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=9.2e-44  Score=346.72  Aligned_cols=257  Identities=27%  Similarity=0.410  Sum_probs=203.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcE----EEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKE----VAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      .++|.+.++||+|+||.||+|.+. +++.    ||+|++.... ......+.+|+.++.+++||||+++++++.. ...+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccE
Confidence            357889999999999999999954 4554    7888775433 2223467789999999999999999999864 5688


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +|+||+.+++|.+++.... ..+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        91 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence            9999999999999997643 2688999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          197 DVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       197 ~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ..... ......||..|+|||++.++.++.++|||||||++|+|++ |+.||.......   +.        ..+..+..
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~--------~~~~~~~~  235 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VP--------DLLEKGER  235 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HH--------HHHHTTCB
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HH--------HHHHcCCC
Confidence            44332 2344678889999999999999999999999999999999 999998654311   11        11122211


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                      .  ..+       ......+.+++.+||+.+|.+||++.||++.|+....
T Consensus       236 ~--~~~-------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          236 L--AQP-------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             C--CCC-------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             C--CCC-------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            1  111       1122357889999999999999999999999986543


No 87 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.4e-43  Score=344.52  Aligned_cols=256  Identities=25%  Similarity=0.397  Sum_probs=201.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcE----EEEEEeecC-CcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKE----VAIKQLKAG-SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~----vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      .++|.+.++||+|+||.||+|.+. +++.    ||+|.+... .......+.+|+.++++++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            468999999999999999999953 4554    577777543 3345678999999999999999999999998765 78


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +|++++.+++|.+++..... .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             EEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            89999999999999976543 699999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          197 DVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       197 ~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ..... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......   +.        ..+..+..
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~--------~~~~~~~~  237 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS--------SILEKGER  237 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH--------HHHHTTCC
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH--------HHHHcCCC
Confidence            43322 2233456888999999999999999999999999999999 999997654311   11        11122211


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      .         ..+......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       238 ~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          238 L---------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             C---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C---------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            1         111223447889999999999999999999999998654


No 88 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=7.2e-43  Score=339.13  Aligned_cols=251  Identities=21%  Similarity=0.341  Sum_probs=199.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCC------
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGS------  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  113 (416)
                      ..++|.+.+.||+|+||.||+|.+. +|+.||||+++.... ...+.+.+|+.++++++||||+++++++.+..      
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            3567999999999999999999975 799999999985443 34467999999999999999999999986643      


Q ss_pred             ---------------------------------------------------eEEEEEEecCCCCHHHHhhcCCC-CCCCH
Q 014904          114 ---------------------------------------------------QRMLVYEFVPNNTLEFHLHGKGR-PTMDW  141 (416)
Q Consensus       114 ---------------------------------------------------~~~lV~e~~~~~sL~~~l~~~~~-~~l~~  141 (416)
                                                                         ..++||||+++++|.+++..... ...++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                               37999999999999999976543 34677


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc-----------ceeecccccc
Q 014904          142 LTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT-----------HVSTRVMGTF  210 (416)
Q Consensus       142 ~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~  210 (416)
                      ..++.++.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++.......           .......||+
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  240 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK  240 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred             HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence            78899999999999999999   999999999999999999999999999987655422           1123357999


Q ss_pred             cccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHH
Q 014904          211 GYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNE  290 (416)
Q Consensus       211 ~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  290 (416)
                      .|+|||++.+..++.++|||||||++|||++|..|+..        ...     .......+.+..         .....
T Consensus       241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~-----~~~~~~~~~~~~---------~~~~~  298 (332)
T 3qd2_B          241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVR-----IITDVRNLKFPL---------LFTQK  298 (332)
T ss_dssp             GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHH-----HHHHHHTTCCCH---------HHHHH
T ss_pred             CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHH-----HHHHhhccCCCc---------ccccC
Confidence            99999999999999999999999999999998765321        000     011111111111         11233


Q ss_pred             HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          291 MARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       291 ~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ...+.+++.+||+.+|.+||++.|+++
T Consensus       299 ~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          299 YPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            456789999999999999999999986


No 89 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=7.1e-43  Score=344.61  Aligned_cols=253  Identities=23%  Similarity=0.380  Sum_probs=205.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecC-----CcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAG-----SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||++...     .....+.+.+|+.++..++||||+++++++.+....+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            46799999999999999999995 46899999998642     1224568999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc---eEEeeccc
Q 014904          117 LVYEFVPNNTLEFHLHGK--GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGL  191 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~---~kl~DFGl  191 (416)
                      +||||+++++|.+.+...  ....+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999998777542  233589999999999999999999999   9999999999999987655   99999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      ++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....    .+.        ..+..
T Consensus       180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~--------~~i~~  246 (351)
T 3c0i_A          180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLF--------EGIIK  246 (351)
T ss_dssp             CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHH--------HHHHH
T ss_pred             eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHH--------HHHHc
Confidence            987755332 23346799999999999999999999999999999999999999976321    111        11112


Q ss_pred             CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          272 GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      +.+..  .+.....    ....+.+++.+||+.||.+||++.|+++
T Consensus       247 ~~~~~--~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          247 GKYKM--NPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             TCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCC--Ccccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            22110  1111111    2357889999999999999999999986


No 90 
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.3e-42  Score=335.46  Aligned_cols=261  Identities=20%  Similarity=0.336  Sum_probs=200.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc---ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG---QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.+.||+|+||.||+|.. .+|+.||||++.....   .....+.+|+.++++++||||+++++++......++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            446899999999999999999995 5789999999985432   234578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          118 VYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ||||+.+++|.+++..  .....+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++...
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF  186 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence            9999999999998864  2234689999999999999999999999   9999999999999999999999999999866


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ..... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||......    ...+     ...+..+.+.
T Consensus       187 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~-----~~~~~~~~~~  256 (310)
T 2wqm_A          187 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSL-----CKKIEQCDYP  256 (310)
T ss_dssp             -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHH-----HHHHHTTCSC
T ss_pred             cCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHH-----HHHhhcccCC
Confidence            54322 223457899999999999999999999999999999999999999754321    1111     1122233322


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      .+..        ......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       257 ~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          257 PLPS--------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             CCCT--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcc--------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            2111        122357889999999999999999999999998543


No 91 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.8e-43  Score=338.46  Aligned_cols=265  Identities=26%  Similarity=0.376  Sum_probs=207.0

Q ss_pred             CCCCcCceecccCcEEEEEEEe-----CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-----PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAG--SQR  115 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  115 (416)
                      ++|++.+.||+|+||.||+|.+     .+++.||||++.... ......+.+|+.++.+++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            5688899999999999999983     468999999997543 33446789999999999999999999999876  668


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ++||||+++++|.+++..... .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI  176 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEeCCCCcHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence            999999999999999965433 589999999999999999999999   9999999999999999999999999999877


Q ss_pred             cCCCcc--eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchh----hhhhhhHHhHHhh
Q 014904          196 SDVNTH--VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDS----LVDWARPLLNRAI  269 (416)
Q Consensus       196 ~~~~~~--~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~----l~~~~~~~~~~~~  269 (416)
                      ......  ......||..|+|||++.+..++.++||||||+++|+|++|+.|+..........    ...+....+...+
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (302)
T 4e5w_A          177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL  256 (302)
T ss_dssp             CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred             cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence            654332  2234568888999999999999999999999999999999999864321100000    0000001111111


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                      ..+.         ....+......+.+++.+||+.+|.+||++.+|++.|+.
T Consensus       257 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          257 KEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             hccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            1211         111222344678999999999999999999999999974


No 92 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.5e-42  Score=353.09  Aligned_cols=255  Identities=21%  Similarity=0.303  Sum_probs=208.0

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ...++|.+.+.||+|+||.||+|.. .+|+.+|+|++......  ....+.+|+.++++++||||+++++++.+....++
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            4567899999999999999999995 57899999999865432  23568899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC---CCCceEEeeccccee
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD---FKFEAKVADFGLAKI  194 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~---~~~~~kl~DFGla~~  194 (416)
                      ||||+.+++|.+.+....  .+++..+..++.|++.||.|||+.   +|+||||||+|||++   .++.+||+|||++..
T Consensus        88 v~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           88 IFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             EECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            999999999999887654  599999999999999999999999   999999999999998   467899999999987


Q ss_pred             ccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          195 ASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       195 ~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.....   ..        +...+..+.+
T Consensus       163 ~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~---~~--------~~~~i~~~~~  230 (444)
T 3soa_A          163 VEGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ---HR--------LYQQIKAGAY  230 (444)
T ss_dssp             CCTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HH--------HHHHHHHTCC
T ss_pred             ecCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH---HH--------HHHHHHhCCC
Confidence            6543322 2346799999999999998999999999999999999999999976442   11        1112223332


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .. ..+.+     ......+.+++.+||+.||.+||++.|+++.
T Consensus       231 ~~-~~~~~-----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          231 DF-PSPEW-----DTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CC-CTTTT-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CC-Ccccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11 11111     1223578899999999999999999999864


No 93 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2.2e-43  Score=341.02  Aligned_cols=268  Identities=27%  Similarity=0.393  Sum_probs=216.3

Q ss_pred             ccCHHHHHHhhCCCCcCceecccCcEEEEEEEe------CCCcEEEEEEeecCCcc-cHHHHHHHHHHHHhc-CCCcccc
Q 014904           33 TFTYEELARATDGFSDANLLGQGGFGYVHRGVL------PNGKEVAIKQLKAGSGQ-GEREFQAEVEIISRV-HHKHLVS  104 (416)
Q Consensus        33 ~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l-~h~niv~  104 (416)
                      .+...+..-..++|.+.+.||+|+||.||+|.+      .+++.||||+++..... ..+.+.+|+.++.++ +||||++
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            345556666788999999999999999999984      35689999999865433 335788999999999 7999999


Q ss_pred             eEEEEEeCC-eEEEEEEecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeee
Q 014904          105 LVGYYTAGS-QRMLVYEFVPNNTLEFHLHGKGR--------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHR  169 (416)
Q Consensus       105 l~~~~~~~~-~~~lV~e~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHr  169 (416)
                      +++++.... ..++|+||+++++|.+++.....              ..+++..++.++.|++.||.|||+.   +|+||
T Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~  172 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR  172 (316)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence            999988754 48999999999999999976543              1288999999999999999999999   99999


Q ss_pred             cccCCcEEECCCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCC
Q 014904          170 DIKAANILLDFKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVD  247 (416)
Q Consensus       170 DIkp~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~  247 (416)
                      ||||+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|+|++ |+.||.
T Consensus       173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~  252 (316)
T 2xir_A          173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP  252 (316)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence            99999999999999999999999876543332 2344668899999999999999999999999999999998 999997


Q ss_pred             CCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          248 STHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .....  ..+.        ..+..+...     ..    +......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       253 ~~~~~--~~~~--------~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          253 GVKID--EEFC--------RRLKEGTRM-----RA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             TCCCS--HHHH--------HHHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccchh--HHHH--------HHhccCccC-----CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            64421  1111        111122111     11    112235788999999999999999999999999854


No 94 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=2.8e-43  Score=335.51  Aligned_cols=256  Identities=25%  Similarity=0.387  Sum_probs=204.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCC----CcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPN----GKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.+.||+|+||.||+|...+    +..||||++..... ...+.+.+|+.++++++||||+++++++.+ ...+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            45789999999999999999998543    34699999986532 334678999999999999999999999865 4568


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +|+||+++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++....
T Consensus        89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            9999999999999997543 2589999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ...........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||......   ....        .+..+...
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~---~~~~--------~~~~~~~~  233 (281)
T 3cc6_A          165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK---DVIG--------VLEKGDRL  233 (281)
T ss_dssp             --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG---GHHH--------HHHHTCCC
T ss_pred             cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH---HHHH--------HHhcCCCC
Confidence            544333344567889999999999999999999999999999998 99999754331   1111        11122111


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                           .    .+......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       234 -----~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          234 -----P----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             -----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----C----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence                 0    1112235789999999999999999999999999854


No 95 
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=5.5e-44  Score=371.94  Aligned_cols=258  Identities=29%  Similarity=0.424  Sum_probs=212.9

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ...++|.+.++||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++|+||+++++++.+ ...+||||
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e  341 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  341 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence            3457889999999999999999999888899999998654 345689999999999999999999999876 67899999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+.+++|.+++.......+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++.......
T Consensus       342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            99999999999754334689999999999999999999999   999999999999999999999999999986643222


Q ss_pred             ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                      .......++..|+|||++.++.++.++|||||||+||||++ |+.||.....   ..+.        ..+..+..     
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~---~~~~--------~~i~~~~~-----  482 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVL--------DQVERGYR-----  482 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH---HHHH--------HHHHTTCC-----
T ss_pred             ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHH--------HHHHcCCC-----
Confidence            22233456788999999999999999999999999999999 9999976432   1111        11222211     


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                          ...+..+...+.+++.+||+.+|++||++.+|++.|+...
T Consensus       483 ----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          483 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                1112233457899999999999999999999999998654


No 96 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.9e-43  Score=344.41  Aligned_cols=267  Identities=28%  Similarity=0.351  Sum_probs=212.5

Q ss_pred             CCCCcCceecccCcEEEEEEEe-----CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEE--eCCeEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-----PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT--AGSQRM  116 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  116 (416)
                      ++|++.+.||+|+||.||+|.+     .+++.||||++........+.+.+|+.++++++|+||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            6889999999999999999983     468899999998776666677999999999999999999999987  456789


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|.+++..... .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  178 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP  178 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred             EEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence            99999999999999975332 589999999999999999999999   99999999999999999999999999998775


Q ss_pred             CCCcc--eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh-----hHHhHHhh
Q 014904          197 DVNTH--VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA-----RPLLNRAI  269 (416)
Q Consensus       197 ~~~~~--~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~-----~~~~~~~~  269 (416)
                      .....  ......||..|+|||++.+..++.++||||||+++|+|++|+.||......... ...+.     ...+...+
T Consensus       179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR-MMGCERDVPALSRLLELL  257 (327)
T ss_dssp             TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-HCC----CCHHHHHHHHH
T ss_pred             cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh-hcccccccccHHHHHHHh
Confidence            43332  223356888899999999999999999999999999999999998653210000 00000     00111111


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                      ..+.         ....+......+.+++.+||+.+|.+||++.||++.|+....
T Consensus       258 ~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          258 EEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             hccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            1111         112223345678999999999999999999999999987543


No 97 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.5e-42  Score=332.17  Aligned_cols=258  Identities=29%  Similarity=0.510  Sum_probs=196.9

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .++|.+.++||+|+||.||+|...  ..||||+++....  ...+.|.+|+.++++++|+||+++++++ .....++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            478999999999999999999864  3599999976543  2335789999999999999999999966 4556899999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC-
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN-  199 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~-  199 (416)
                      |+.+++|.+++.... ..+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... 
T Consensus       100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  175 (289)
T 3og7_A          100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG  175 (289)
T ss_dssp             CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred             ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence            999999999996544 3699999999999999999999999   99999999999999999999999999997654322 


Q ss_pred             cceeecccccccccChhhhc---cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          200 THVSTRVMGTFGYLAPEYAS---SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~---~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ........||+.|+|||.+.   +..++.++||||||+++|+|++|+.||.....  ...+.        ..+..+....
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~--------~~~~~~~~~~  245 (289)
T 3og7_A          176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN--RDQII--------EMVGRGSLSP  245 (289)
T ss_dssp             --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC--HHHHH--------HHHHHTSCCC
T ss_pred             cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch--HHHHH--------HHhcccccCc
Confidence            22234467999999999986   66789999999999999999999999976443  11111        1112222211


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ..     .......+..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       246 ~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          246 DL-----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             CT-----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             ch-----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            11     111223346899999999999999999999999999864


No 98 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.9e-43  Score=341.65  Aligned_cols=269  Identities=24%  Similarity=0.424  Sum_probs=218.2

Q ss_pred             cccCHHHHHHhhCCCCcCceecccCcEEEEEEEeC------CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccc
Q 014904           32 STFTYEELARATDGFSDANLLGQGGFGYVHRGVLP------NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVS  104 (416)
Q Consensus        32 ~~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~  104 (416)
                      ..|..++...+.++|.+.+.||+|+||.||+|.+.      +++.||||++..... .....+.+|+.+++.++|+||++
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   92 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR   92 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEee
Confidence            34555666778899999999999999999999854      378899999975433 23356889999999999999999


Q ss_pred             eEEEEEeCCeEEEEEEecCCCCHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcE
Q 014904          105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKG--------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANI  176 (416)
Q Consensus       105 l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NI  176 (416)
                      +++++.+....++||||+++++|.+++....        ...+++..++.++.|++.||.|||+.   +|+||||||+||
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NI  169 (322)
T 1p4o_A           93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC  169 (322)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGE
T ss_pred             eEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceE
Confidence            9999999999999999999999999986421        13579999999999999999999999   999999999999


Q ss_pred             EECCCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccc
Q 014904          177 LLDFKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVE  254 (416)
Q Consensus       177 Ll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~  254 (416)
                      +++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.....   
T Consensus       170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---  246 (322)
T 1p4o_A          170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---  246 (322)
T ss_dssp             EECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---
T ss_pred             EEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH---
Confidence            9999999999999999865443222 1233467889999999999999999999999999999999 8999876432   


Q ss_pred             hhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          255 DSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       255 ~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ..+.        ..+..+....         .+......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       247 ~~~~--------~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          247 EQVL--------RFVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHH--------HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHH--------HHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            1111        1112222111         11223457889999999999999999999999998754


No 99 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-42  Score=337.37  Aligned_cols=246  Identities=25%  Similarity=0.352  Sum_probs=205.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|... +|+.||||+++...   ......+.+|+.+++.++||||+++++++.+....++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            467999999999999999999964 78999999997532   22345678999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++....  .+++..+..++.+++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        85 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            99999999999997654  589999999999999999999999   9999999999999999999999999999876442


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||......      ....     .+..+.+    
T Consensus       160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~-----~i~~~~~----  220 (318)
T 1fot_A          160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYE-----KILNAEL----  220 (318)
T ss_dssp             ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHH-----HHHHCCC----
T ss_pred             ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHH-----HHHhCCC----
Confidence                23467999999999999999999999999999999999999999764421      1111     1112211    


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRP-----RMSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----t~~evv~~  318 (416)
                        .    ++......+.+++.+||+.+|.+||     ++.||++.
T Consensus       221 --~----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          221 --R----FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             --C----CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --C----CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence              1    1112235788999999999999999     88888743


No 100
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=5.6e-43  Score=350.44  Aligned_cols=250  Identities=22%  Similarity=0.329  Sum_probs=197.9

Q ss_pred             CCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcC--CCcccceEEEEEeCCeEEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVH--HKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ++|.+.+.||+|+||.||+|...+++.||||++.....  .....+.+|+.++.+++  |+||+++++++......++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            45999999999999999999988899999999976532  33467899999999996  599999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      | +.+++|.+++....  .+++..++.|+.|++.||.|||+.   +|+||||||+||||+ ++.+||+|||+++......
T Consensus       136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            9 56889999997654  688999999999999999999999   999999999999995 5789999999998765433


Q ss_pred             cc-eeecccccccccChhhhcc-----------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHH
Q 014904          200 TH-VSTRVMGTFGYLAPEYASS-----------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNR  267 (416)
Q Consensus       200 ~~-~~~~~~gt~~YlaPE~~~~-----------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  267 (416)
                      .. ......||+.|+|||++.+           ..++.++|||||||+||||++|+.||......    . ..    +..
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~-~~----~~~  279 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----I-SK----LHA  279 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----H-HH----HHH
T ss_pred             ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH----H-HH----HHH
Confidence            22 2345679999999999865           46899999999999999999999999754321    0 00    111


Q ss_pred             hhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          268 AIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       268 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      . ...        .....++......+.+++.+||+.+|.+||++.||++.
T Consensus       280 ~-~~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          280 I-IDP--------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             H-HCT--------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             H-hCc--------cccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            1 111        11111111123578899999999999999999999864


No 101
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.3e-42  Score=348.31  Aligned_cols=250  Identities=22%  Similarity=0.337  Sum_probs=200.9

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc---HHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG---EREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  117 (416)
                      .++|.+.++||+|+||.||+|... +++.||||+++......   ...+..|..++.++ +||||+++++++.+....++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            468999999999999999999964 68899999998643222   23578899999887 89999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|..++....  .+++..+..++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++....
T Consensus       131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            999999999999987644  599999999999999999999999   999999999999999999999999999986332


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccc--hhhhhhhhHHhHHhhhcCCcc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE--DSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      .. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ....++    +.+.+..+.+ 
T Consensus       206 ~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~----~~~~i~~~~~-  279 (396)
T 4dc2_A          206 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY----LFQVILEKQI-  279 (396)
T ss_dssp             TT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHH----HHHHHHHCCC-
T ss_pred             CC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHH----HHHHHhcccc-
Confidence            22 223456899999999999999999999999999999999999999975332111  111111    1111222221 


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRM  312 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~  312 (416)
                               .++......+.+++.+||+.+|.+||++
T Consensus       280 ---------~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          280 ---------RIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ---------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence                     1122234578899999999999999996


No 102
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=4.3e-43  Score=343.05  Aligned_cols=258  Identities=26%  Similarity=0.410  Sum_probs=210.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC--------CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhc-CCCcccceEEEEEeC
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP--------NGKEVAIKQLKAGSG-QGEREFQAEVEIISRV-HHKHLVSLVGYYTAG  112 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  112 (416)
                      .++|.+.+.||+|+||.||+|.+.        +++.||||+++.... .....+.+|+.++.++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            478999999999999999999863        467899999986543 2345788999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE
Q 014904          113 SQRMLVYEFVPNNTLEFHLHGKGR--------------PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL  178 (416)
Q Consensus       113 ~~~~lV~e~~~~~sL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl  178 (416)
                      ...++||||+++++|.+++.....              ..+++..++.++.|++.||.|||+.   +|+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence            999999999999999999976432              2489999999999999999999999   99999999999999


Q ss_pred             CCCCceEEeecccceeccCCCcce-eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchh
Q 014904          179 DFKFEAKVADFGLAKIASDVNTHV-STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDS  256 (416)
Q Consensus       179 ~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~  256 (416)
                      +.++.+||+|||+++......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ..
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~  267 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---EE  267 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HH
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---HH
Confidence            999999999999998765433222 233457889999999998899999999999999999999 9999976432   11


Q ss_pred             hhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          257 LVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       257 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      +.        ..+..+...     .    .+......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       268 ~~--------~~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          268 LF--------KLLKEGHRM-----D----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HH--------HHHHHTCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HH--------HHHhcCCCC-----C----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            11        111222111     1    11223457899999999999999999999999998654


No 103
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=9.1e-44  Score=358.64  Aligned_cols=264  Identities=20%  Similarity=0.222  Sum_probs=210.9

Q ss_pred             cCHHHHHHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc---cHHHHHHHHHHHHhcCCCcccceEEEE
Q 014904           34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ---GEREFQAEVEIISRVHHKHLVSLVGYY  109 (416)
Q Consensus        34 f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~  109 (416)
                      +.++++....++|.+.++||+|+||.||++... +|+.||||+++.....   ....+.+|..++..++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            345666777899999999999999999999964 7999999999753211   123478899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeec
Q 014904          110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF  189 (416)
Q Consensus       110 ~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DF  189 (416)
                      .+....+|||||+++++|..++...+. .+++..+..++.+++.||.|||+.   +|+||||||+||||+.++.+||+||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF  206 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF  206 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence            999999999999999999999975432 689999999999999999999999   9999999999999999999999999


Q ss_pred             ccceeccCCCcceeecccccccccChhhhc-------cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhh
Q 014904          190 GLAKIASDVNTHVSTRVMGTFGYLAPEYAS-------SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWAR  262 (416)
Q Consensus       190 Gla~~~~~~~~~~~~~~~gt~~YlaPE~~~-------~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~  262 (416)
                      |+++.............+||+.|+|||++.       .+.++.++|||||||++|||++|+.||.......   .   ..
T Consensus       207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---~---~~  280 (412)
T 2vd5_A          207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE---T---YG  280 (412)
T ss_dssp             TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---H---HH
T ss_pred             hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH---H---HH
Confidence            999877654444444568999999999987       4578999999999999999999999997654311   0   11


Q ss_pred             HHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCC---CCHHHHHHH
Q 014904          263 PLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRR---PRMSQIVRA  318 (416)
Q Consensus       263 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R---Pt~~evv~~  318 (416)
                      .++... ..     +.-|....    .....+.+++.+||+ +|.+|   |++.||++.
T Consensus       281 ~i~~~~-~~-----~~~p~~~~----~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          281 KIVHYK-EH-----LSLPLVDE----GVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHTHH-HH-----CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHhcc-cC-----cCCCcccc----CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            111000 00     00111111    223578899999999 99998   588888754


No 104
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.5e-43  Score=341.72  Aligned_cols=255  Identities=30%  Similarity=0.466  Sum_probs=199.9

Q ss_pred             CCCcCceecccCcEEEEEEEeCC-----CcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           45 GFSDANLLGQGGFGYVHRGVLPN-----GKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        45 ~f~~~~~LG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      +|...++||+|+||.||+|....     +..||||+++.... .....+.+|+.++.+++||||+++++++......++|
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  124 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII  124 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence            44457899999999999999543     23699999986533 2335788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       125 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          125 TEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             EECCTTEEHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EeCCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence            999999999999976433 699999999999999999999999   9999999999999999999999999999876543


Q ss_pred             Ccce--eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          199 NTHV--STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       199 ~~~~--~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ....  .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ..+        ...+..+.. 
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---~~~--------~~~~~~~~~-  268 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---HEV--------MKAINDGFR-  268 (333)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHH--------HHHHHTTCC-
T ss_pred             cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH---HHH--------HHHHHCCCc-
Confidence            2221  122346788999999999999999999999999999999 9999975432   111        111222211 


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                       .       ..+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       269 -~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          269 -L-------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             -C-------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             -C-------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence             0       111223457899999999999999999999999998643


No 105
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.4e-42  Score=346.91  Aligned_cols=250  Identities=26%  Similarity=0.331  Sum_probs=205.7

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||++... +++.||||++....   ....+.+.+|+.++..++||||+++++++.+....++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            368999999999999999999954 68899999987432   23346788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+.+++|..++....  .+++..+..++.+++.||.|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus        94 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             ECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            99999999999997644  599999999999999999999999   9999999999999999999999999999876543


Q ss_pred             CcceeecccccccccChhhhcc---CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~---~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      .  ......||+.|+|||++..   ..++.++|||||||++|||++|+.||..........+....        ....  
T Consensus       169 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--------~~~~--  236 (384)
T 4fr4_A          169 T--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--------ETTV--  236 (384)
T ss_dssp             C--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH--------HHCC--
T ss_pred             C--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH--------hhcc--
Confidence            2  2344679999999999864   45899999999999999999999999765432222222211        1111  


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPR-MSQIVR  317 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt-~~evv~  317 (416)
                              ..++......+.+++.+||+.+|.+||+ +.+|++
T Consensus       237 --------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 --------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             --------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             --------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence                    1112223457899999999999999998 666654


No 106
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.1e-43  Score=370.91  Aligned_cols=247  Identities=28%  Similarity=0.414  Sum_probs=200.2

Q ss_pred             eecccCcEEEEEEEeC---CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEecCCCC
Q 014904           51 LLGQGGFGYVHRGVLP---NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNT  126 (416)
Q Consensus        51 ~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~~s  126 (416)
                      .||+|+||.||+|.+.   ++..||||+++.... ...++|.+|+.++++++|||||+++++|.. ...++||||+++++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999863   466899999986533 345789999999999999999999999976 56899999999999


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCccee--e
Q 014904          127 LEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVS--T  204 (416)
Q Consensus       127 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~--~  204 (416)
                      |.+++.... ..+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++..........  .
T Consensus       422 L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~  497 (613)
T 2ozo_A          422 LHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS  497 (613)
T ss_dssp             HHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred             HHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence            999997543 3699999999999999999999999   999999999999999999999999999987654332222  2


Q ss_pred             cccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCcccc
Q 014904          205 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLH  283 (416)
Q Consensus       205 ~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~  283 (416)
                      ...+|+.|+|||++.++.++.++|||||||+||||++ |+.||......   .+.        ..+..+..         
T Consensus       498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~--------~~i~~~~~---------  557 (613)
T 2ozo_A          498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVM--------AFIEQGKR---------  557 (613)
T ss_dssp             ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHH--------HHHHTTCC---------
T ss_pred             CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHH--------HHHHcCCC---------
Confidence            2345689999999999999999999999999999998 99999765431   111        12223321         


Q ss_pred             CcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          284 NEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       284 ~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ...+..++..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            112223456899999999999999999999999999864


No 107
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.3e-43  Score=345.58  Aligned_cols=261  Identities=23%  Similarity=0.283  Sum_probs=204.5

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecC-----CcccHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAG-----SGQGEREFQAEVEIISRVHHKHLVSLVGYYTA  111 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  111 (416)
                      ++..+.++|.+.+.||+|+||.||+|.. .+++.||||++...     .......+.+|+.++++++||||+++++++.+
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            4667889999999999999999999995 46889999998643     23344678999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhhcCC--------------------------------------CCCCCHHHHHHHHHHHHH
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHGKG--------------------------------------RPTMDWLTRLKIALGSAK  153 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~ia~  153 (416)
                      ....++||||+++++|.+++....                                      ...+++..++.|+.|++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            999999999999999999885210                                      112357778899999999


Q ss_pred             HHHHHHhcCCCCeeeecccCCcEEECCCC--ceEEeecccceeccCCCcc---eeecccccccccChhhhcc--CCCCch
Q 014904          154 GLAYLHEDCHPKIIHRDIKAANILLDFKF--EAKVADFGLAKIASDVNTH---VSTRVMGTFGYLAPEYASS--GKLTEK  226 (416)
Q Consensus       154 aL~~LH~~~~~~iiHrDIkp~NILl~~~~--~~kl~DFGla~~~~~~~~~---~~~~~~gt~~YlaPE~~~~--~~~t~k  226 (416)
                      ||+|||+.   +|+||||||+|||++.++  .+||+|||+++........   ......||+.|+|||++.+  ..++.+
T Consensus       180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            99999999   999999999999998776  8999999999876442221   2344679999999999975  678999


Q ss_pred             hhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCC
Q 014904          227 SDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSA  306 (416)
Q Consensus       227 sDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p  306 (416)
                      +|||||||++|||++|+.||......  +.+        ...+ .+... +..+..     ......+.+++.+||+.+|
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~--~~~--------~~~~-~~~~~-~~~~~~-----~~~~~~~~~li~~~l~~~p  319 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDA--DTI--------SQVL-NKKLC-FENPNY-----NVLSPLARDLLSNLLNRNV  319 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH--HHH--------HHHH-HCCCC-TTSGGG-----GGSCHHHHHHHHHHSCSCT
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChH--HHH--------HHHH-hcccc-cCCccc-----ccCCHHHHHHHHHHcCCCh
Confidence            99999999999999999999765431  111        1111 11110 111111     1123578899999999999


Q ss_pred             CCCCCHHHHHHH
Q 014904          307 RRRPRMSQIVRA  318 (416)
Q Consensus       307 ~~RPt~~evv~~  318 (416)
                      .+||++.|+++.
T Consensus       320 ~~Rps~~~~l~h  331 (345)
T 3hko_A          320 DERFDAMRALQH  331 (345)
T ss_dssp             TTSCCHHHHHHS
T ss_pred             hHCCCHHHHhcC
Confidence            999999999863


No 108
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=7.8e-44  Score=348.76  Aligned_cols=256  Identities=25%  Similarity=0.388  Sum_probs=200.6

Q ss_pred             HHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc-ccHHHHHHHHHH-HHhcCCCcccceEEEEEeCCeE
Q 014904           39 LARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG-QGEREFQAEVEI-ISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        39 l~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      .....++|.+.+.||+|+||.||+|.. .+|+.||||++..... ....++..|..+ ++.++||||+++++++.+....
T Consensus        46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~  125 (340)
T 3an0_A           46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV  125 (340)
T ss_dssp             CCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred             eEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence            345567899999999999999999995 5789999999976532 233455556655 7778999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          116 MLVYEFVPNNTLEFHLHGK--GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ++||||+.+ +|.+++...  ....+++..++.|+.|++.||.|||+.+  +|+||||||+|||++.++.+||+|||+++
T Consensus       126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  202 (340)
T 3an0_A          126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG  202 (340)
T ss_dssp             EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred             EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence            999999975 888877631  2347999999999999999999999754  89999999999999999999999999998


Q ss_pred             eccCCCcceeecccccccccChhhhc----cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhh
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYAS----SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAI  269 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~----~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  269 (416)
                      ......  ......||+.|+|||++.    ...++.++|||||||++|||++|+.||...... ...        +...+
T Consensus       203 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-~~~--------~~~~~  271 (340)
T 3an0_A          203 YLVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQ--------LKQVV  271 (340)
T ss_dssp             HHSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHH--------HHHHH
T ss_pred             eccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-HHH--------HHHHh
Confidence            664321  123357999999999964    347899999999999999999999999764321 111        11111


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      .... ..+.        .......+.+++.+||+.+|++||++.||++
T Consensus       272 ~~~~-~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          272 EEPS-PQLP--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             HSCC-CCCC--------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCCC-CCCC--------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            1111 1110        1123457899999999999999999999986


No 109
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.4e-42  Score=328.03  Aligned_cols=246  Identities=24%  Similarity=0.365  Sum_probs=182.0

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++....   ......+.+|+.++++++||||+++++++.+....++|
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence            36899999999999999999994 578999999997643   23345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+ +++|.+.+....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++......
T Consensus        92 ~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  165 (275)
T 2eue_A           92 IEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             EECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred             ehhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence            9999 667777765543  589999999999999999999999   9999999999999999999999999999866543


Q ss_pred             CcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      ..  .....||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||......           .....+..+...  
T Consensus       166 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----------~~~~~~~~~~~~--  230 (275)
T 2eue_A          166 NF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-----------VLFKNISNGVYT--  230 (275)
T ss_dssp             -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH-----------HHHHHHHHTCCC--
T ss_pred             cc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHhCCCC--
Confidence            22  233568999999999987765 78999999999999999999999764421           111112222211  


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                              .+......+.+++.+||+.+|.+||++.|+++
T Consensus       231 --------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          231 --------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             --------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence                    11122346889999999999999999999975


No 110
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=2.1e-43  Score=344.49  Aligned_cols=259  Identities=27%  Similarity=0.388  Sum_probs=210.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCC-C-----cEEEEEEeecCCc-ccHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPN-G-----KEVAIKQLKAGSG-QGEREFQAEVEIISRV-HHKHLVSLVGYYTAGS  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~-g-----~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  113 (416)
                      ..++|.+.+.||+|+||.||+|.... +     +.||||++..... .....+.+|+.++.++ +||||+++++++.+..
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            45789999999999999999999642 2     4799999986543 2345789999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKG------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK  181 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~  181 (416)
                      ..++||||+++++|.+++....            ...+++..++.++.|++.||.|||+.   +|+||||||+|||++.+
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence            9999999999999999986431            23589999999999999999999999   99999999999999999


Q ss_pred             CceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhh
Q 014904          182 FEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVD  259 (416)
Q Consensus       182 ~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~  259 (416)
                      +.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......  ..+..
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~  278 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN--SKFYK  278 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS--HHHHH
T ss_pred             CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh--HHHHH
Confidence            99999999999866543332 2234567889999999999999999999999999999999 99999764421  11111


Q ss_pred             hhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          260 WARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                              ....+..     .    ..+......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       279 --------~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          279 --------LVKDGYQ-----M----AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             --------HHHHTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------HHhcCCC-----C----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence                    1111110     0    01112235788999999999999999999999999854


No 111
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=3.6e-42  Score=334.46  Aligned_cols=265  Identities=22%  Similarity=0.316  Sum_probs=190.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+.++++++||||+++++++......++||
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            357899999999999999999995 4689999999976542 23367889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          120 EFVPNNTLEFHLHGK----GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       120 e~~~~~sL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ||+. ++|.+++...    ....+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9998 5888887542    223589999999999999999999999   9999999999999999999999999999876


Q ss_pred             cCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH-------hHH
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL-------LNR  267 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~-------~~~  267 (416)
                      ...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......  .+.......       +..
T Consensus       159 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~  235 (317)
T 2pmi_A          159 GIPVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE--QLKLIFDIMGTPNESLWPS  235 (317)
T ss_dssp             TSCCCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCTTTCGG
T ss_pred             CCCccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChhHhhh
Confidence            533222 233578999999999976 468999999999999999999999997654311  111100000       000


Q ss_pred             hhhcCC------------cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          268 AIEDGN------------FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       268 ~~~~~~------------~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ......            +.+.+.+.....    ....+.+++.+||+.||++||++.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEP----LDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             GGGCTTCCTTCCCCCCCCSHHHHGGGCSSC----CCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhcccccccccchhHHHhhccccccc----CCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            000000            000111111111    2347899999999999999999999885


No 112
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.9e-43  Score=332.94  Aligned_cols=256  Identities=27%  Similarity=0.407  Sum_probs=208.9

Q ss_pred             hCCCCcCc-eecccCcEEEEEEEeC---CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           43 TDGFSDAN-LLGQGGFGYVHRGVLP---NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        43 t~~f~~~~-~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      .++|.+.+ .||+|+||.||+|...   +++.||||+++.... ...+.+.+|+.++.+++||||+++++++ .....++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            35666666 9999999999999853   578899999986533 3346789999999999999999999999 5567899


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++....
T Consensus        87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            999999999999997543 3699999999999999999999999   999999999999999999999999999987754


Q ss_pred             CCccee--ecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          198 VNTHVS--TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       198 ~~~~~~--~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ......  ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ..+.        ..+..+..
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~--------~~i~~~~~  231 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG---PEVM--------AFIEQGKR  231 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT---HHHH--------HHHHTTCC
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---HHHH--------HHHhcCCc
Confidence            333222  23456889999999998899999999999999999999 9999976543   1111        11222221


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      .         ..+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       232 ~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          232 M---------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             C---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C---------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1         112233457899999999999999999999999998643


No 113
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.3e-42  Score=333.68  Aligned_cols=266  Identities=23%  Similarity=0.291  Sum_probs=201.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc-----ccHHHHHHHHHHHHhcC---CCcccceEEEEEeC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG-----QGEREFQAEVEIISRVH---HKHLVSLVGYYTAG  112 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  112 (416)
                      ++++|.+.+.||+|+||.||+|.. .+++.||||++.....     .....+.+|+.+++++.   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            568999999999999999999995 5789999999874321     11245677787777764   99999999999876


Q ss_pred             C-----eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEe
Q 014904          113 S-----QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVA  187 (416)
Q Consensus       113 ~-----~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~  187 (416)
                      .     ..++||||+. ++|.+++.......+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence            5     5799999996 5999999877666699999999999999999999999   99999999999999999999999


Q ss_pred             ecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHH
Q 014904          188 DFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNR  267 (416)
Q Consensus       188 DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  267 (416)
                      |||+++.......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......  ..+..... .+..
T Consensus       163 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~-~~~~  237 (308)
T 3g33_A          163 DFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--DQLGKIFD-LIGL  237 (308)
T ss_dssp             SCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH--HHHHHHHH-HHCC
T ss_pred             eCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH-HhCC
Confidence            9999986643222  24567999999999999999999999999999999999999999765431  11111110 0000


Q ss_pred             hhhcCCccc---ccCcccc-------CcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          268 AIEDGNFDT---LVDPKLH-------NEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       268 ~~~~~~~~~---~~d~~l~-------~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       .....+..   +....+.       ..........+.+++.+||+.||.+||++.|+++
T Consensus       238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          238 -PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             -CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence             00000000   0000000       0001123357889999999999999999999985


No 114
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.2e-42  Score=333.48  Aligned_cols=260  Identities=21%  Similarity=0.273  Sum_probs=200.7

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc---HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG---EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ...++|.+.+.||+|+||.||+|... +++.||||++.......   ...+.+|+.++.+++||||+++++++......+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            34589999999999999999999964 68999999997543322   357889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +|+||+++++|.+++....  .+++..++.++.+++.||.|||+.   +|+||||||+|||++.++.+||+|||++....
T Consensus       111 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            9999999999999997543  589999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ...........|++.|+|||++.+..++.++||||||+++|+|++|+.||......   .        +...+.... ..
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~--------~~~~~~~~~-~~  253 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---V--------MGAHINQAI-PR  253 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---H--------HHHHHHSCC-CC
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---H--------HHHHhccCC-CC
Confidence            54433334567999999999999999999999999999999999999999764321   1        111111111 00


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHhcccc
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRP-RMSQIVRALEGDA  323 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-t~~evv~~L~~~~  323 (416)
                         +   .......+..+.+++.+||+.+|++|| ++.++++.|+...
T Consensus       254 ---~---~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          254 ---P---STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             ---G---GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             ---c---cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence               0   011122334788999999999999999 9999999998654


No 115
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=3.3e-43  Score=345.75  Aligned_cols=264  Identities=19%  Similarity=0.231  Sum_probs=200.4

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC----CCcEEEEEEeecCCccc-----------HHHHHHHHHHHHhcCCCcccceEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSGQG-----------EREFQAEVEIISRVHHKHLVSLVG  107 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~  107 (416)
                      .++|.+.+.||+|+||.||+|...    ++..+|||++.......           ...+..|+.++..++|+||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            478999999999999999999965    57899999998654321           123667888999999999999999


Q ss_pred             EEEe----CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC-
Q 014904          108 YYTA----GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF-  182 (416)
Q Consensus       108 ~~~~----~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~-  182 (416)
                      ++..    ....++||||+ +++|.+++....  .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++ 
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence            9988    77899999999 999999997654  699999999999999999999999   999999999999998887 


Q ss_pred             -ceEEeecccceeccCCCcce------eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch
Q 014904          183 -EAKVADFGLAKIASDVNTHV------STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED  255 (416)
Q Consensus       183 -~~kl~DFGla~~~~~~~~~~------~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~  255 (416)
                       .+||+|||+++.........      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~  268 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-V  268 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-H
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-H
Confidence             99999999998764332211      134579999999999999999999999999999999999999996422111 1


Q ss_pred             hhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          256 SLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .+. ......    . ..+...+.....   ....+..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       269 ~~~-~~~~~~----~-~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          269 AVQ-TAKTNL----L-DELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHH-HHHHHH----H-HTTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHH-HHHHhh----c-ccccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            111 110000    0 000000000000   012335789999999999999999999999999864


No 116
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6e-42  Score=333.91  Aligned_cols=272  Identities=25%  Similarity=0.360  Sum_probs=206.6

Q ss_pred             CHHHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhc--CCCcccceEEEEEeC
Q 014904           35 TYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV--HHKHLVSLVGYYTAG  112 (416)
Q Consensus        35 ~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~  112 (416)
                      ....-....++|.+.++||+|+||.||+|... ++.||||++...   ....+..|.+++..+  +||||+++++++...
T Consensus        28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            34445556789999999999999999999984 899999998643   234555666666655  899999999999987


Q ss_pred             ----CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeeecccCCcEEECCCCc
Q 014904          113 ----SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-----HPKIIHRDIKAANILLDFKFE  183 (416)
Q Consensus       113 ----~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-----~~~iiHrDIkp~NILl~~~~~  183 (416)
                          ...++||||+++++|.+++...   .+++..++.++.+++.||+|||+.+     .++|+||||||+|||++.++.
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~  180 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT  180 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence                7899999999999999999754   5999999999999999999999763     348999999999999999999


Q ss_pred             eEEeecccceeccCCCcce---eecccccccccChhhhccCCCCch------hhhHhHHHHHHHHHhC----------CC
Q 014904          184 AKVADFGLAKIASDVNTHV---STRVMGTFGYLAPEYASSGKLTEK------SDVFSFGVMLLELITG----------RR  244 (416)
Q Consensus       184 ~kl~DFGla~~~~~~~~~~---~~~~~gt~~YlaPE~~~~~~~t~k------sDV~SlGvvL~elltG----------~~  244 (416)
                      +||+|||+++.........   .....||+.|+|||++.+.....+      +|||||||++|||++|          +.
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~  260 (337)
T 3mdy_A          181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL  260 (337)
T ss_dssp             EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence            9999999998665433221   124579999999999987766665      9999999999999999          55


Q ss_pred             CCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcC-CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          245 PVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEY-NHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       245 pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ||........ ....     +........    ..+.+...+ ...+...+.+++.+||+.+|.+||++.||++.|+...
T Consensus       261 p~~~~~~~~~-~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          261 PYHDLVPSDP-SYED-----MREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             TTTTTSCSSC-CHHH-----HHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cHhhhcCCCC-chhh-----hHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            5543222110 1111     111111111    111111111 2367788999999999999999999999999998643


No 117
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.1e-42  Score=341.45  Aligned_cols=246  Identities=24%  Similarity=0.288  Sum_probs=206.0

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|... +|+.||||++....   ......+.+|+.++..++||||+++++++.+....++|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            368999999999999999999964 68999999997532   23345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++...+  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       120 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             EECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence            99999999999997644  589999999999999999999999   9999999999999999999999999999876542


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||......      +.     ...+..+.+    
T Consensus       195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~-----~~~i~~~~~----  255 (350)
T 1rdq_E          195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QI-----YEKIVSGKV----  255 (350)
T ss_dssp             ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HH-----HHHHHHCCC----
T ss_pred             ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HH-----HHHHHcCCC----
Confidence                23457999999999999999999999999999999999999999765421      11     111222221    


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPR-----MSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt-----~~evv~~  318 (416)
                        .+    +......+.+++.+||+.+|.+||+     +.||++.
T Consensus       256 --~~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          256 --RF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             --CC----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             --CC----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence              11    1123357889999999999999998     7777753


No 118
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=5.9e-42  Score=325.42  Aligned_cols=251  Identities=22%  Similarity=0.276  Sum_probs=206.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||+|... ++..||+|++..........+.+|+.++++++||||+++++++.+....++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            4578999999999999999999964 578999999987666667789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeecccceeccC
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~~~~  197 (416)
                      |+++++|.+++....  .+++..++.|+.+++.||.|||+.   +|+||||||+||++   +.++.+||+|||++.....
T Consensus        87 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           87 LCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             ccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            999999998886543  589999999999999999999999   99999999999999   7889999999999987654


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      ...  .....||+.|+|||++.+ .++.++||||||+++++|++|+.||......   ..        ...+..+.... 
T Consensus       162 ~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~--------~~~~~~~~~~~-  226 (277)
T 3f3z_A          162 GKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS---EV--------MLKIREGTFTF-  226 (277)
T ss_dssp             TSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HH--------HHHHHHCCCCC-
T ss_pred             ccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH---HH--------HHHHHhCCCCC-
Confidence            332  234569999999999865 5999999999999999999999999764421   11        11112222110 


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ... ...    .....+.+++.+||+.+|.+||++.|+++
T Consensus       227 ~~~-~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          227 PEK-DWL----NVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CHH-HHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             Cch-hhh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000 000    12357889999999999999999999985


No 119
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=4.8e-42  Score=326.92  Aligned_cols=253  Identities=25%  Similarity=0.366  Sum_probs=206.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||+|++.....  .....+.+|+.++++++||||+++++++......++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            4689999999999999999999964 689999999975432  2335788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc---eEEeecccceec
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIA  195 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~---~kl~DFGla~~~  195 (416)
                      |||+++++|.+.+....  .+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.   +||+|||++...
T Consensus        84 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           84 FDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            99999999988886543  589999999999999999999999   9999999999999987655   999999999876


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      .....  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......   .+        ...+..+...
T Consensus       159 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~--------~~~~~~~~~~  225 (284)
T 3kk8_A          159 NDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RL--------YAQIKAGAYD  225 (284)
T ss_dssp             CSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH--------HHHHHHTCCC
T ss_pred             ccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HH--------HHHHHhcccc
Confidence            54332  23457999999999999999999999999999999999999999764431   11        1111222211


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      . ..+.     .......+.+++.+||+.+|.+||++.|+++.
T Consensus       226 ~-~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          226 Y-PSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             C-CTTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             C-Cchh-----hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            1 1111     11223568899999999999999999999873


No 120
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=8.1e-43  Score=345.68  Aligned_cols=254  Identities=20%  Similarity=0.264  Sum_probs=195.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||++... +++.||||++...... ...+.+|+.+++.++||||+++++++.+....++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3578999999999999999999965 7899999999865433 3568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc--eEEeecccceeccCC
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE--AKVADFGLAKIASDV  198 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~--~kl~DFGla~~~~~~  198 (416)
                      |+.+++|..++...+  .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.  +||+|||+++.....
T Consensus        97 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           97 YASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             eCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            999999999986544  589999999999999999999999   9999999999999987765  999999998743322


Q ss_pred             CcceeecccccccccChhhhccCCCCch-hhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEK-SDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~k-sDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .  ......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||........  ......    . +...... +
T Consensus       172 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~----~-~~~~~~~-~  241 (361)
T 3uc3_A          172 S--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQ----R-ILSVKYS-I  241 (361)
T ss_dssp             -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHH----H-HHTTCCC-C
T ss_pred             C--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHH----H-HhcCCCC-C
Confidence            1  2234579999999999988887666 8999999999999999999976443111  111111    1 1111110 0


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .       ........+.+++.+||+.+|.+||++.|+++.
T Consensus       242 ~-------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          242 P-------DDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             C-------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             C-------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            0       001123578899999999999999999999864


No 121
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.7e-42  Score=338.55  Aligned_cols=249  Identities=24%  Similarity=0.344  Sum_probs=195.9

Q ss_pred             hCCCCcCceecccCcEEEEEEEe----CCCcEEEEEEeecCCc----ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGSG----QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      .++|.+.++||+|+||.||++..    .+++.||||+++....    .....+.+|+.+++.++||||+++++++.....
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46899999999999999999996    4789999999986432    223467889999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      .++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++.
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            999999999999999987543  588999999999999999999999   999999999999999999999999999875


Q ss_pred             ccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          195 ASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       195 ~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   ..   ..     .+..+..
T Consensus       171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~---~~-----~i~~~~~  238 (327)
T 3a62_A          171 SIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---KT---ID-----KILKCKL  238 (327)
T ss_dssp             ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HH---HH-----HHHHTCC
T ss_pred             cccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---HH---HH-----HHHhCCC
Confidence            433222 234467999999999999999999999999999999999999999764421   11   11     1111111


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRP-----RMSQIVRA  318 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----t~~evv~~  318 (416)
                            .    ++......+.+++.+||+.+|.+||     ++.|+++.
T Consensus       239 ------~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          239 ------N----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             ------C----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             ------C----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence                  1    1112335788999999999999999     66777653


No 122
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2e-42  Score=336.31  Aligned_cols=261  Identities=30%  Similarity=0.394  Sum_probs=207.8

Q ss_pred             CCcCceecccCcEEEEEEEeC-----CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEEE
Q 014904           46 FSDANLLGQGGFGYVHRGVLP-----NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTA--GSQRML  117 (416)
Q Consensus        46 f~~~~~LG~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  117 (416)
                      |.+.+.||+|+||.||++...     +++.||||+++.... .....+.+|+.++++++||||+++++++.+  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            488999999999999988642     688999999986543 334578999999999999999999999988  467899


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|.+++...   .+++..++.|+.+++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  186 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  186 (318)
T ss_dssp             EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred             EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence            99999999999999764   389999999999999999999999   999999999999999999999999999987765


Q ss_pred             CCcc--eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh-----hHHhHHhhh
Q 014904          198 VNTH--VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA-----RPLLNRAIE  270 (416)
Q Consensus       198 ~~~~--~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~-----~~~~~~~~~  270 (416)
                      ....  ......+|..|+|||++.+..++.++||||||+++|+|++|+.||...... ...+..+.     ...+...+.
T Consensus       187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-FLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-HHHHHCSCCHHHHHHHHHHHHH
T ss_pred             cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh-hhhhhcccccchhHHHHHHHHh
Confidence            4332  223456788899999999989999999999999999999999998653210 00111110     011111122


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      .+.         ....+......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       266 ~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          266 RGE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             TTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            221         1122233446899999999999999999999999999854


No 123
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=5.4e-42  Score=327.95  Aligned_cols=262  Identities=21%  Similarity=0.274  Sum_probs=203.4

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEE-EeCCeEEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYY-TAGSQRMLV  118 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV  118 (416)
                      ...++|.+.+.||+|+||.||+|.. .+++.||||++......  ..+..|+.++..++|++++..+..+ ......++|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            3568999999999999999999995 67899999987654322  3578899999999988877666655 677888999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeecccceec
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKIA  195 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~~  195 (416)
                      |||+ +++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+|||+   +.++.+||+|||+++..
T Consensus        84 ~e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EECC-CCBHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEcc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            9999 9999999875433 599999999999999999999999   99999999999999   78899999999999876


Q ss_pred             cCCCcc------eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhh
Q 014904          196 SDVNTH------VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAI  269 (416)
Q Consensus       196 ~~~~~~------~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  269 (416)
                      ......      ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.................   ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~  235 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE---KKM  235 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH---HHH
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhc---ccc
Confidence            554331      12346799999999999999999999999999999999999999986543222222111100   000


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                       ....     +.+...    .+..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       236 -~~~~-----~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          236 -STPI-----EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             -HSCH-----HHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             -cchh-----hhhhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence             0000     001111    135789999999999999999999999999854


No 124
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=4e-42  Score=332.03  Aligned_cols=270  Identities=19%  Similarity=0.291  Sum_probs=201.3

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc--HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG--EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      .++|.+.+.||+|+||.||+|... +|+.||||++.......  .+.+.+|+.++.+++||||+++++++......++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            468999999999999999999964 58999999987554322  356789999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++++|..++....  .+++..+..++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        82 e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           82 EYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             ECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence            9999999998886543  589999999999999999999999   99999999999999999999999999998765432


Q ss_pred             cceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh-h---HHhHHhhhcCCc
Q 014904          200 THVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA-R---PLLNRAIEDGNF  274 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~-~---~~~~~~~~~~~~  274 (416)
                      .. .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||............... .   +...........
T Consensus       157 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (311)
T 4agu_A          157 DY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY  235 (311)
T ss_dssp             ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred             cc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence            22 234578999999999876 67899999999999999999999999775542211111100 0   000000000000


Q ss_pred             ---ccccCccccCc---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          275 ---DTLVDPKLHNE---YNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       275 ---~~~~d~~l~~~---~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                         ..+.++.....   ........+.+++.+||+.+|.+||++.||++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence               01111110000   001234568899999999999999999999864


No 125
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.7e-42  Score=330.90  Aligned_cols=252  Identities=26%  Similarity=0.380  Sum_probs=204.4

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CC-------cEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NG-------KEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      .++|.+.+.||+|+||.||+|... ++       ..||+|++..........+.+|+.++++++||||+++++++.+...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            467889999999999999999954 33       4799999987666666789999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc--------eEE
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE--------AKV  186 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~--------~kl  186 (416)
                      .++||||+++++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.        +||
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             CEEEEECCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence            9999999999999999976542 489999999999999999999999   9999999999999998887        999


Q ss_pred             eecccceeccCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh
Q 014904          187 ADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL  265 (416)
Q Consensus       187 ~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~  265 (416)
                      +|||++......     ....||+.|+|||++.+ ..++.++||||||+++|||++|..|+.....  ......      
T Consensus       163 ~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~--~~~~~~------  229 (289)
T 4fvq_A          163 SDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD--SQRKLQ------  229 (289)
T ss_dssp             CCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHH------
T ss_pred             ccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc--hHHHHH------
Confidence            999998654321     23568999999999987 6799999999999999999996555433221  111110      


Q ss_pred             HHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          266 NRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       266 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                        ......       .+...    ....+.+++.+||+.+|.+||++.||++.|+....
T Consensus       230 --~~~~~~-------~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          230 --FYEDRH-------QLPAP----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             --HHHTTC-------CCCCC----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             --HhhccC-------CCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence              001100       01111    12357899999999999999999999999997654


No 126
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=8.4e-43  Score=342.52  Aligned_cols=248  Identities=23%  Similarity=0.314  Sum_probs=202.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.+.||+|+||.||+|.+ .+++.||||++....   ......+.+|+.+++.++||||+++++++......++
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            347899999999999999999995 578999999987431   1223578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+ +++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        87 v~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             EECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             EEECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            99999 678887776543  589999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ...  .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......   +        ...+..+.   
T Consensus       161 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~---~--------~~~i~~~~---  224 (336)
T 3h4j_B          161 GNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---L--------FKKVNSCV---  224 (336)
T ss_dssp             SBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT---C--------BCCCCSSC---
T ss_pred             Ccc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH---H--------HHHHHcCC---
Confidence            322  234579999999999987765 789999999999999999999997643210   0        00000110   


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                             ...+......+.+++.+||+.||.+||++.||++.
T Consensus       225 -------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          225 -------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             -------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             -------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                   01122233578899999999999999999999864


No 127
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.8e-42  Score=329.15  Aligned_cols=251  Identities=27%  Similarity=0.386  Sum_probs=186.1

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ...++|.+.+.||+|+||.||+|.. .+|+.||||++....   ......+.+|+.++.+++||||+++++++.+....+
T Consensus         8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (278)
T 3cok_A            8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY   87 (278)
T ss_dssp             SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred             cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence            3457899999999999999999996 578999999997432   122367899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +|+||+++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++....
T Consensus        88 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           88 LVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            9999999999999997543 3689999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ..... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||........  +        .. ....    
T Consensus       164 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~--------~~-~~~~----  227 (278)
T 3cok_A          164 MPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--L--------NK-VVLA----  227 (278)
T ss_dssp             -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------CCSS----
T ss_pred             CCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--H--------HH-Hhhc----
Confidence            32222 2335789999999999988999999999999999999999999976443110  0        00 0000    


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        +..    .+......+.+++.+||+.+|++||++.+|++
T Consensus       228 --~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          228 --DYE----MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             --CCC----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --ccC----CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence              111    11223357889999999999999999999985


No 128
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.1e-41  Score=331.14  Aligned_cols=253  Identities=25%  Similarity=0.351  Sum_probs=208.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ------GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||++......      ....+.+|+.++.+++||||+++++++.+...
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            4577999999999999999999964 6899999999764322      35679999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC----ceEEeecc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFG  190 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~----~~kl~DFG  190 (416)
                      .++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            999999999999999997643  589999999999999999999999   999999999999999887    79999999


Q ss_pred             cceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          191 LAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       191 la~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      +++.......  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......   ...        ..+.
T Consensus       165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~--------~~i~  231 (321)
T 2a2a_A          165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETL--------ANIT  231 (321)
T ss_dssp             TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHH--------HHHH
T ss_pred             cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---HHH--------HHHH
Confidence            9987654322  23456999999999999999999999999999999999999999764321   111        1111


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .+...  .++.....    ....+.+++.+||+.+|.+||++.|+++.
T Consensus       232 ~~~~~--~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          232 SVSYD--FDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             TTCCC--CCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             hcccc--cChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            11110  01111111    23468899999999999999999999863


No 129
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.1e-42  Score=343.01  Aligned_cols=250  Identities=25%  Similarity=0.350  Sum_probs=204.5

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCe
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  114 (416)
                      ....++|.+.++||+|+||.||+|... +|+.||||+++...   ......+..|..++..+ +||||+++++++.+...
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345689999999999999999999964 68999999997532   22345678899999887 99999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      .++||||+++++|..++....  .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            999999999999999997643  589999999999999999999999   999999999999999999999999999986


Q ss_pred             ccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          195 ASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       195 ~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.        ..+..+. 
T Consensus       168 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~--------~~i~~~~-  234 (345)
T 1xjd_A          168 NMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---EELF--------HSIRMDN-  234 (345)
T ss_dssp             CCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH--------HHHHHCC-
T ss_pred             cccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH---HHHH--------HHHHhCC-
Confidence            432222 23456899999999999999999999999999999999999999976442   1111        1111221 


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHH-HHH
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMS-QIV  316 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~-evv  316 (416)
                           +.+    +......+.+++.+||+.+|.+||++. +|+
T Consensus       235 -----~~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          235 -----PFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             -----CCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             -----CCC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                 111    112335788999999999999999997 655


No 130
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=4.2e-43  Score=339.40  Aligned_cols=265  Identities=26%  Similarity=0.361  Sum_probs=201.0

Q ss_pred             CHHHHHHhhCCCCcCceecccCcEEEEEEEeC----CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEE
Q 014904           35 TYEELARATDGFSDANLLGQGGFGYVHRGVLP----NGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGY  108 (416)
Q Consensus        35 ~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~  108 (416)
                      .++++....++|.+.+.||+|+||.||+|...    +++.||||+++....  .....+.+|+.++++++||||++++++
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence            34455556678888899999999999999853    345899999975532  233578899999999999999999999


Q ss_pred             EEeCC-----eEEEEEEecCCCCHHHHhhc----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC
Q 014904          109 YTAGS-----QRMLVYEFVPNNTLEFHLHG----KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD  179 (416)
Q Consensus       109 ~~~~~-----~~~lV~e~~~~~sL~~~l~~----~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~  179 (416)
                      +.+..     ..++|+||+++++|..++..    .....+++..++.|+.|++.||.|||+.   +|+||||||+|||++
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~  181 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLR  181 (313)
T ss_dssp             EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEEC
T ss_pred             EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEc
Confidence            98754     35999999999999999843    2334699999999999999999999999   999999999999999


Q ss_pred             CCCceEEeecccceeccCCCcc-eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhh
Q 014904          180 FKFEAKVADFGLAKIASDVNTH-VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSL  257 (416)
Q Consensus       180 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l  257 (416)
                      .++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||......   .+
T Consensus       182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~  258 (313)
T 3brb_A          182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EM  258 (313)
T ss_dssp             TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GH
T ss_pred             CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HH
Confidence            9999999999999866443222 2233567889999999999999999999999999999999 88998765431   11


Q ss_pred             hhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          258 VDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ..        .+..+...     ..    +......+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       259 ~~--------~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          259 YD--------YLLHGHRL-----KQ----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             HH--------HHHTTCCC-----CC----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH--------HHHcCCCC-----CC----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            11        11122111     11    122335789999999999999999999999999864


No 131
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=9.8e-43  Score=354.39  Aligned_cols=250  Identities=23%  Similarity=0.331  Sum_probs=197.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecC---CcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAG---SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.++||+|+||.||+|.. .+|+.||||+++..   .......+..|+.++..++||||+++++++......++
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346899999999999999999995 46899999999753   22333567889999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHE-DCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      ||||+++++|..++....  .+++..+..++.|++.||+|||+ .   +|+||||||+||||+.++.+||+|||+++...
T Consensus       226 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             EECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999999987543  58999999999999999999998 7   89999999999999999999999999998643


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      .... ......||+.|+|||++.+..++.++|||||||+||||++|+.||.....   ..+.        ..+..+..  
T Consensus       301 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~--------~~i~~~~~--  366 (446)
T 4ejn_A          301 KDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLF--------ELILMEEI--  366 (446)
T ss_dssp             C------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH--------HHHHHCCC--
T ss_pred             CCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHH--------HHHHhCCC--
Confidence            3222 23446799999999999999999999999999999999999999976443   1111        11111111  


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRP-----RMSQIVRA  318 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----t~~evv~~  318 (416)
                          .    ++......+.+++.+||+.||.+||     ++.|+++.
T Consensus       367 ----~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          367 ----R----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             ----C----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             ----C----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence                1    1112335788999999999999999     99999863


No 132
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=1e-42  Score=336.89  Aligned_cols=253  Identities=30%  Similarity=0.472  Sum_probs=198.7

Q ss_pred             CCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEecC
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVP  123 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  123 (416)
                      ++|.+.++||+|+||.||+|.. .++.||||++...  ...+.|.+|+.++++++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            5788899999999999999998 4789999998743  334678999999999999999999998874  4789999999


Q ss_pred             CCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc-eEEeecccceeccCCCcc
Q 014904          124 NNTLEFHLHGKGR-PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE-AKVADFGLAKIASDVNTH  201 (416)
Q Consensus       124 ~~sL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~-~kl~DFGla~~~~~~~~~  201 (416)
                      +++|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.....   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            9999999986543 35789999999999999999999943338999999999999988876 799999999755432   


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCcc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPK  281 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~  281 (416)
                       .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......  ....|       ....+..     +.
T Consensus       160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~-------~~~~~~~-----~~  224 (307)
T 2eva_A          160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMW-------AVHNGTR-----PP  224 (307)
T ss_dssp             ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH--HHHHH-------HHHTTCC-----CC
T ss_pred             -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH--HHHHH-------HHhcCCC-----CC
Confidence             123468999999999999999999999999999999999999997543211  11111       1112211     11


Q ss_pred             ccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          282 LHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       282 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ....    .+..+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       225 ~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          225 LIKN----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             CBTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             cccc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            1122    2346889999999999999999999999998643


No 133
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.7e-41  Score=324.76  Aligned_cols=261  Identities=20%  Similarity=0.263  Sum_probs=207.6

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEE-EeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYY-TAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++......  ..+..|+.++..++|++++..+.++ ......++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            467899999999999999999995 67999999998765433  3688999999999988866665555 6678889999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeecccceecc
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~~~  196 (416)
                      ||+ +++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+|||+   +.++.+||+|||+++...
T Consensus        85 e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             Eec-CCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            999 9999999974433 699999999999999999999999   99999999999999   488899999999998766


Q ss_pred             CCCcc------eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          197 DVNTH------VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       197 ~~~~~------~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.................   ....
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~  236 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE---KKMS  236 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH---HHHH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc---cccC
Confidence            54332      12446799999999999999999999999999999999999999986543222221111110   0000


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                       ..     .+.+...    .+..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       237 -~~-----~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          237 -TP-----IEVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             -SC-----HHHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             -Cc-----hHHHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence             00     0001111    235789999999999999999999999999854


No 134
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.6e-42  Score=329.65  Aligned_cols=248  Identities=26%  Similarity=0.428  Sum_probs=206.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe---------
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA---------  111 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------  111 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||||++....    ..+.+|+.++.+++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            4567999999999999999999975 79999999998654    356789999999999999999998864         


Q ss_pred             -------CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCce
Q 014904          112 -------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA  184 (416)
Q Consensus       112 -------~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~  184 (416)
                             ....++||||+++++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence                   34579999999999999999765445799999999999999999999999   99999999999999999999


Q ss_pred             EEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH
Q 014904          185 KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL  264 (416)
Q Consensus       185 kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~  264 (416)
                      ||+|||++........  .....||+.|+|||++.+..++.++||||||+++|+|++|..|+...        ..+    
T Consensus       162 kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~----  227 (284)
T 2a19_B          162 KIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKF----  227 (284)
T ss_dssp             EECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHH----
T ss_pred             EECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHH----
Confidence            9999999987654332  23456899999999999999999999999999999999999885321        011    


Q ss_pred             hHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          265 LNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       265 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                       ...+..+.+        ...+    ...+.+++.+||+.+|.+||++.||++.|+...
T Consensus       228 -~~~~~~~~~--------~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          228 -FTDLRDGII--------SDIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             -HHHHHTTCC--------CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             -HHHhhcccc--------cccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence             111122221        1122    246789999999999999999999999997543


No 135
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.4e-41  Score=332.27  Aligned_cols=268  Identities=24%  Similarity=0.346  Sum_probs=212.6

Q ss_pred             CHHHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHh--cCCCcccceEEEEEeC
Q 014904           35 TYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR--VHHKHLVSLVGYYTAG  112 (416)
Q Consensus        35 ~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~  112 (416)
                      ...--....++|.+.+.||+|+||.||+|.. +|+.||||++...   ....+..|++++..  ++||||+++++++...
T Consensus        33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            3444456678999999999999999999998 5899999998643   34677889999888  7899999999999887


Q ss_pred             C----eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeeecccCCcEEECC
Q 014904          113 S----QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH--------EDCHPKIIHRDIKAANILLDF  180 (416)
Q Consensus       113 ~----~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~iiHrDIkp~NILl~~  180 (416)
                      .    ..++||||+++++|.+++...   .+++..++.++.+++.||.|||        +.   +|+||||||+||||+.
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK  182 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred             CCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence            6    789999999999999999754   5899999999999999999999        66   9999999999999999


Q ss_pred             CCceEEeecccceeccCCCcc---eeecccccccccChhhhccCC------CCchhhhHhHHHHHHHHHhC---------
Q 014904          181 KFEAKVADFGLAKIASDVNTH---VSTRVMGTFGYLAPEYASSGK------LTEKSDVFSFGVMLLELITG---------  242 (416)
Q Consensus       181 ~~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~YlaPE~~~~~~------~t~ksDV~SlGvvL~elltG---------  242 (416)
                      ++.+||+|||+++........   ......||+.|+|||++.+..      ++.++|||||||++|||++|         
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~  262 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED  262 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence            999999999999876554332   123457999999999997652      33789999999999999999         


Q ss_pred             -CCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCc-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhc
Q 014904          243 -RRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNE-YNHNEMARMVACAAACVRHSARRRPRMSQIVRALE  320 (416)
Q Consensus       243 -~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~  320 (416)
                       +.||...... ......+..     .+..+.    ..+.+... ........+.+++.+||+.+|.+||++.||++.|+
T Consensus       263 ~~~p~~~~~~~-~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~  332 (342)
T 1b6c_B          263 YQLPYYDLVPS-DPSVEEMRK-----VVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  332 (342)
T ss_dssp             CCCTTTTTSCS-SCCHHHHHH-----HHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred             cccCccccCcC-cccHHHHHH-----HHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence             6677554321 111111111     111111    11222211 23467788999999999999999999999999998


Q ss_pred             cc
Q 014904          321 GD  322 (416)
Q Consensus       321 ~~  322 (416)
                      ..
T Consensus       333 ~i  334 (342)
T 1b6c_B          333 QL  334 (342)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.3e-42  Score=336.31  Aligned_cols=257  Identities=26%  Similarity=0.413  Sum_probs=197.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc---HHHHHHHHHHHHhcCCCcccceEEEEEeCC----
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG---EREFQAEVEIISRVHHKHLVSLVGYYTAGS----  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  113 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||+++......   ...+.+|+.++.+++||||+++++++....    
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            457899999999999999999995 578999999998654333   346889999999999999999999987644    


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             ccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            3499999999999999997544  589999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCCcc--eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          194 IASDVNTH--VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       194 ~~~~~~~~--~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      ........  ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......  .        .......
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~--------~~~~~~~  234 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--V--------AYQHVRE  234 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--H--------HHHHHHC
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--H--------HHHHhcC
Confidence            76543222  2234679999999999999999999999999999999999999997654311  0        0111111


Q ss_pred             CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH-Hhc
Q 014904          272 GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR-ALE  320 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~-~L~  320 (416)
                      .....   .....    .....+.+++.+||+.+|.+||++.++++ .|.
T Consensus       235 ~~~~~---~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  277 (311)
T 3ork_A          235 DPIPP---SARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLV  277 (311)
T ss_dssp             CCCCH---HHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             CCCCc---ccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence            11100   00011    12357889999999999999997666554 443


No 137
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=9.1e-42  Score=336.25  Aligned_cols=250  Identities=23%  Similarity=0.332  Sum_probs=201.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc---cHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ---GEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  117 (416)
                      .++|.+.+.||+|+||.||+|... +++.||||+++.....   ....+..|..++.++ +||||+++++++.+....++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            367999999999999999999964 6899999999865322   234678899999988 89999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|..++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        88 v~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             EECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            999999999999987543  589999999999999999999999   999999999999999999999999999986433


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch--hhhhhhhHHhHHhhhcCCcc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED--SLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ....    .+...+..+.. 
T Consensus       163 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----~~~~~i~~~~~-  236 (345)
T 3a8x_A          163 PGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED----YLFQVILEKQI-  236 (345)
T ss_dssp             TTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHH----HHHHHHHHCCC-
T ss_pred             CCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHH----HHHHHHHcCCC-
Confidence            222 234468999999999999999999999999999999999999999753221110  1111    11111222221 


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRM  312 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~  312 (416)
                           .    ++......+.+++.+||+.+|.+||++
T Consensus       237 -----~----~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          237 -----R----IPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             -----C----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             -----C----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                 1    122233578899999999999999996


No 138
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.8e-43  Score=340.53  Aligned_cols=267  Identities=24%  Similarity=0.346  Sum_probs=210.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-----CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCC--eE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-----PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGS--QR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~  115 (416)
                      .++|.+.+.||+|+||.||+|..     .+++.||||++........+.+.+|+.++++++||||+++++++....  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35788999999999999999983     368999999998766555678999999999999999999999987643  67


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ++|+||+++++|.+++..... .+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||+++..
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTT-SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEECCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            999999999999999976543 589999999999999999999999   9999999999999999999999999999877


Q ss_pred             cCCCcce--eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch-----hhhhhhhHHhHHh
Q 014904          196 SDVNTHV--STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED-----SLVDWARPLLNRA  268 (416)
Q Consensus       196 ~~~~~~~--~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~-----~l~~~~~~~~~~~  268 (416)
                      .......  .....++..|+|||.+.+..++.++||||||+++|||++|+.|+.........     ....+....+...
T Consensus       196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (326)
T 2w1i_A          196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL  275 (326)
T ss_dssp             CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred             cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence            5543321  22345778899999999888999999999999999999999987642110000     0000000111111


Q ss_pred             hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          269 IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       269 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      +..+..         ...+...+..+.+++.+||+.+|.+||++.||++.|+..
T Consensus       276 ~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          276 LKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhcCCC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            122111         111223346789999999999999999999999999854


No 139
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.2e-42  Score=342.79  Aligned_cols=247  Identities=26%  Similarity=0.395  Sum_probs=200.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc---HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG---EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .+.|...+.||+|+||.||+|.. .+++.||||++.......   ...+.+|+.++++++||||+++++++......++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35688999999999999999995 578999999997654322   24688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+. ++|.+++.... ..+++..++.++.+++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       133 ~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  207 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  207 (348)
T ss_dssp             EECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred             EecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence            99997 57777765332 3689999999999999999999999   9999999999999999999999999999865432


Q ss_pred             CcceeecccccccccChhhhc---cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          199 NTHVSTRVMGTFGYLAPEYAS---SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~---~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                           ....||+.|+|||++.   .+.++.++|||||||++|||++|+.||......  ..+        .... .+...
T Consensus       208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~--------~~~~-~~~~~  271 (348)
T 1u5q_A          208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SAL--------YHIA-QNESP  271 (348)
T ss_dssp             -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHH--------HHHH-HSCCC
T ss_pred             -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHH--------HHHH-hcCCC
Confidence                 2357999999999984   567899999999999999999999999764321  111        1111 11111


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .+..    .    .....+.+++.+||+.+|++||++.+|++.
T Consensus       272 ~~~~----~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          272 ALQS----G----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CCCC----T----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCC----C----CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1111    1    223468899999999999999999999864


No 140
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=7.8e-43  Score=337.89  Aligned_cols=261  Identities=23%  Similarity=0.309  Sum_probs=205.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe----CCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA----GSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  116 (416)
                      ..++|.+.+.||+|+||.||++.. .+++.||||++..........+.+|+.+++.++||||+++++++..    ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            357899999999999999999996 6789999999977665566789999999999999999999999873    34789


Q ss_pred             EEEEecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          117 LVYEFVPNNTLEFHLHGK--GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      +|+||+.+++|.+++...  ....+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++..
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            999999999999988652  234699999999999999999999999   999999999999999999999999999876


Q ss_pred             ccCCCcc--------eeecccccccccChhhhccCC---CCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH
Q 014904          195 ASDVNTH--------VSTRVMGTFGYLAPEYASSGK---LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP  263 (416)
Q Consensus       195 ~~~~~~~--------~~~~~~gt~~YlaPE~~~~~~---~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~  263 (416)
                      .......        ......||+.|+|||++....   ++.++||||||+++|+|++|+.||....... ..+.     
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~-----  257 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVA-----  257 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHH-----
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhh-----
Confidence            5321111        012245799999999987553   6899999999999999999999985321100 0010     


Q ss_pred             HhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          264 LLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       264 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                         ..... .. .+       .........+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       258 ---~~~~~-~~-~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          258 ---LAVQN-QL-SI-------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             ---HHHHC-C---C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             ---HHhhc-cC-CC-------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence               00111 10 00       011122357899999999999999999999999998643


No 141
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=5.2e-43  Score=333.12  Aligned_cols=250  Identities=29%  Similarity=0.425  Sum_probs=199.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeC-CeEEEEEEe
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAG-SQRMLVYEF  121 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~  121 (416)
                      .++|.+.+.||+|+||.||+|.. +|+.||||+++...  ..+.+.+|+.++++++||||+++++++.+. ...++|+||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            57899999999999999999987 58899999997543  346789999999999999999999997654 468999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +++++|.+++.......+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++.......  
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  171 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  171 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence            9999999999765433488999999999999999999999   99999999999999999999999999987654322  


Q ss_pred             eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCc
Q 014904          202 VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDP  280 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~  280 (416)
                        ....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||......   .+.        ..+..+..     +
T Consensus       172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~--------~~~~~~~~-----~  233 (278)
T 1byg_A          172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVV--------PRVEKGYK-----M  233 (278)
T ss_dssp             ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHH--------HHHTTTCC-----C
T ss_pred             --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHH--------HHHhcCCC-----C
Confidence              22457889999999999999999999999999999998 99999764321   111        11112211     1


Q ss_pred             cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          281 KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       281 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                          ..+......+.+++.+||+.+|.+||++.||++.|+..
T Consensus       234 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          234 ----DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence                11222345789999999999999999999999999853


No 142
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=7.1e-43  Score=347.83  Aligned_cols=252  Identities=24%  Similarity=0.308  Sum_probs=197.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc---cHHHHHHHHHH-HHhcCCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ---GEREFQAEVEI-ISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.++||+|+||.||+|... +++.||||+++.....   ....+..|..+ ++.++||||+++++++.+....+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            3468999999999999999999964 5889999999764322   22355667666 56789999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|..++....  .+++..+..++.+++.||.|||+.   +|+||||||+||||+.++.+||+|||+++...
T Consensus       116 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            9999999999999987643  588999999999999999999999   99999999999999999999999999998643


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......      +...     .+..+.+  
T Consensus       191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~-----~i~~~~~--  256 (373)
T 2r5t_A          191 EHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYD-----NILNKPL--  256 (373)
T ss_dssp             CCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHH-----HHHHSCC--
T ss_pred             cCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHH-----HHHhccc--
Confidence            322 2234568999999999999999999999999999999999999999764321      1111     1111211  


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhc
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALE  320 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~  320 (416)
                          .+    +......+.+++.+||+.+|.+||++.+.++.+.
T Consensus       257 ----~~----~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~  292 (373)
T 2r5t_A          257 ----QL----KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIK  292 (373)
T ss_dssp             ----CC----CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred             ----CC----CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence                11    1122346889999999999999999875554443


No 143
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=6.2e-44  Score=342.60  Aligned_cols=261  Identities=25%  Similarity=0.376  Sum_probs=190.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHh--cCCCcccceEEEEEeCC----eEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISR--VHHKHLVSLVGYYTAGS----QRM  116 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~  116 (416)
                      .++|.+.+.||+|+||.||+|.. +|+.||||++...   ....+..|.+++..  ++||||+++++++....    ..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            47899999999999999999987 4899999998743   34567788888888  79999999999998876    789


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeeecccCCcEEECCCCceEEee
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH--------EDCHPKIIHRDIKAANILLDFKFEAKVAD  188 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~iiHrDIkp~NILl~~~~~~kl~D  188 (416)
                      +||||+++++|.+++...   .+++..++.++.+++.||+|||        +.   +|+||||||+|||++.++.+||+|
T Consensus        78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D  151 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred             EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence            999999999999999654   5788889999999999999999        66   999999999999999999999999


Q ss_pred             cccceeccCCCcce---eecccccccccChhhhccC------CCCchhhhHhHHHHHHHHHhC----------CCCCCCC
Q 014904          189 FGLAKIASDVNTHV---STRVMGTFGYLAPEYASSG------KLTEKSDVFSFGVMLLELITG----------RRPVDST  249 (416)
Q Consensus       189 FGla~~~~~~~~~~---~~~~~gt~~YlaPE~~~~~------~~t~ksDV~SlGvvL~elltG----------~~pf~~~  249 (416)
                      ||+++.........   .....||+.|+|||++.+.      .++.++|||||||++|||++|          +.||...
T Consensus       152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~  231 (303)
T 3gxj_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred             cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence            99997665443322   2334799999999999776      344689999999999999999          4555432


Q ss_pred             CcccchhhhhhhhHHhHHhhhcCCcccccCccccCcC-CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          250 HTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEY-NHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      .... .....+     ...+....    ..+.....+ ...+...+.+++.+||+.+|.+||++.||++.|+...
T Consensus       232 ~~~~-~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~  296 (303)
T 3gxj_A          232 VPSD-PSVEEM-----RKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             CC-C-CCCC-C-----HHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred             CCCC-ccHHHH-----HHHHHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence            2100 000000     01111111    112221111 2366778999999999999999999999999998654


No 144
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-42  Score=329.48  Aligned_cols=256  Identities=25%  Similarity=0.324  Sum_probs=201.7

Q ss_pred             CCCcCceecccCcEEEEEEEeC-CC---cEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE-EEE
Q 014904           45 GFSDANLLGQGGFGYVHRGVLP-NG---KEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR-MLV  118 (416)
Q Consensus        45 ~f~~~~~LG~G~~g~Vy~~~~~-~g---~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV  118 (416)
                      .|...++||+|+||.||+|.+. ++   ..||+|++..... ...+.+.+|+.+++.++||||+++++++.+.... ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            3445688999999999999853 23   3799999875443 3346788999999999999999999999876554 999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      +||+.+++|.+++.... ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR  177 (298)
T ss_dssp             ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred             EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence            99999999999997643 3689999999999999999999999   9999999999999999999999999999865432


Q ss_pred             Cc---ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          199 NT---HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       199 ~~---~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ..   .......+|+.|+|||.+.+..++.++||||||+++|+|++|..|+.....  ...+..        .+..+...
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~--------~~~~~~~~  247 (298)
T 3pls_A          178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTH--------FLAQGRRL  247 (298)
T ss_dssp             GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHH--------HHHTTCCC
T ss_pred             cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHH--------HhhcCCCC
Confidence            21   122335678999999999999999999999999999999996665433222  111111        11122110


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                               ..+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       248 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          248 ---------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                     111122357899999999999999999999999998643


No 145
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=4.2e-42  Score=339.77  Aligned_cols=249  Identities=25%  Similarity=0.345  Sum_probs=204.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.++||+|+||.||+|... +++.||||+++...   ......+..|..++..+ +||||+++++++.+....+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3578999999999999999999965 48899999997532   23345678899999988 8999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|..++...+  .+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++...
T Consensus        98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~  172 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  172 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence            9999999999999997644  589999999999999999999999   99999999999999999999999999998643


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      .... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+   .     ..+..+.+  
T Consensus       173 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---~~~---~-----~~i~~~~~--  238 (353)
T 2i0e_A          173 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DEL---F-----QSIMEHNV--  238 (353)
T ss_dssp             CTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH---H-----HHHHHCCC--
T ss_pred             cCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH---HHH---H-----HHHHhCCC--
Confidence            2222 23446799999999999999999999999999999999999999976432   111   1     11112221  


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPR-----MSQIVR  317 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt-----~~evv~  317 (416)
                          .    ++......+.+++.+||+.+|.+||+     +.+|++
T Consensus       239 ----~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          239 ----A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             ----C----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             ----C----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                1    11223457889999999999999996     466654


No 146
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.2e-42  Score=332.99  Aligned_cols=255  Identities=25%  Similarity=0.368  Sum_probs=205.7

Q ss_pred             hhCCCCcCc-eecccCcEEEEEEEe---CCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 014904           42 ATDGFSDAN-LLGQGGFGYVHRGVL---PNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        42 ~t~~f~~~~-~LG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      ..++|.+.+ .||+|+||.||+|..   .+++.||||+++.....  ..+++.+|+.+++.++||||+++++++ .....
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            446788877 999999999999963   34789999999765322  246789999999999999999999999 56778


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ++|+||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++...
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            99999999999999997653  589999999999999999999999   9999999999999999999999999999876


Q ss_pred             cCCCccee--ecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcC
Q 014904          196 SDVNTHVS--TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDG  272 (416)
Q Consensus       196 ~~~~~~~~--~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~  272 (416)
                      ........  ....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.....   ..+.        ..+..+
T Consensus       168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~--------~~~~~~  236 (291)
T 1xbb_A          168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---SEVT--------AMLEKG  236 (291)
T ss_dssp             CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHH--------HHHHTT
T ss_pred             ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHH--------HHHHcC
Confidence            55433322  22346788999999998889999999999999999999 9999976543   1111        112222


Q ss_pred             CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          273 NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       273 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ...         ..+......+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       237 ~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          237 ERM---------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             CCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            211         11223345789999999999999999999999999854


No 147
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=4.8e-42  Score=326.64  Aligned_cols=248  Identities=27%  Similarity=0.419  Sum_probs=202.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      +.++|.+.+.||+|+||.||+|... +++.||||++....   ......+.+|+.++++++||||+++++++.+....++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4678999999999999999999954 57899999986432   1224578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|.+++....  .+++..++.++.+++.||.|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        87 v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             EECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             EEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            999999999999987543  589999999999999999999998   999999999999999999999999999865433


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .   ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.......   ..        ..+.....   
T Consensus       162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~--------~~~~~~~~---  224 (279)
T 3fdn_A          162 S---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE---TY--------KRISRVEF---  224 (279)
T ss_dssp             ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH--------HHHHHTCC---
T ss_pred             c---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH---HH--------HHHHhCCC---
Confidence            2   2234578999999999999999999999999999999999999997644211   00        11111111   


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                             .++......+.+++.+||+.+|.+||++.||++.
T Consensus       225 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          225 -------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             -------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             -------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                   1112233578899999999999999999999964


No 148
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=5.7e-42  Score=335.58  Aligned_cols=250  Identities=20%  Similarity=0.332  Sum_probs=206.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc---ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG---QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.++||+|+||.||++... +++.||+|++.....   .....+..|+.+++.++|+||+++++++.+....++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            4578999999999999999999964 588999999875432   234578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+.+++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       119 v~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  193 (335)
T ss_dssp             EECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence            999999999999886543  589999999999999999999999   999999999999999999999999999987653


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      ... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||......      +..     ..+..+.+   
T Consensus       194 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~-----~~~~~~~~---  258 (335)
T 2owb_A          194 DGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETY-----LRIKKNEY---  258 (335)
T ss_dssp             TTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHH-----HHHHHTCC---
T ss_pred             Ccc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH------HHH-----HHHhcCCC---
Confidence            322 223467999999999999989999999999999999999999999764421      110     01111211   


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                         .+...    ....+.+++.+||+.+|++||++.||++.
T Consensus       259 ---~~~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 ---SIPKH----INPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             ---CCCTT----SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ---CCCcc----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               11112    23468899999999999999999999863


No 149
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.9e-42  Score=338.17  Aligned_cols=267  Identities=18%  Similarity=0.250  Sum_probs=195.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc--HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG--EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|.+.++||+|+||.||+|.. .+++.||||+++......  ...+.+|+.++++++||||+++++++.+....++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            457899999999999999999995 478999999997554322  34678999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE-----CCCCceEEeecccce
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL-----DFKFEAKVADFGLAK  193 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl-----~~~~~~kl~DFGla~  193 (416)
                      |||+.+ +|.+++....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||+     +.++.+||+|||+++
T Consensus       112 ~e~~~~-~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          112 FEYAEN-DLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             EECCSE-EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EecCCC-CHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            999975 8988887654  589999999999999999999999   99999999999999     455569999999998


Q ss_pred             eccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhH------
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLN------  266 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~------  266 (416)
                      ....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +.+.......-.      
T Consensus       186 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~  262 (329)
T 3gbz_A          186 AFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--DQLFKIFEVLGLPDDTTW  262 (329)
T ss_dssp             HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCTTTS
T ss_pred             ccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--HHHHHHHHHhCCCchhhh
Confidence            7653322 22345689999999999875 4899999999999999999999999765431  111111100000      


Q ss_pred             -Hhhh----cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          267 -RAIE----DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       267 -~~~~----~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       ....    ...+.......+...........+.+++.+||+.||.+||++.|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence             0000    00000000000000001112357889999999999999999999986


No 150
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.1e-41  Score=329.56  Aligned_cols=265  Identities=21%  Similarity=0.341  Sum_probs=202.0

Q ss_pred             hCCCCcC-ceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEE
Q 014904           43 TDGFSDA-NLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        43 t~~f~~~-~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      .+.|.+. ++||+|+||.||+|.. .+++.||||++..........+.+|+.++.++ +||||+++++++.+....++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            4678874 7899999999999994 57899999999877666677899999999985 7999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc---eEEeecccceecc
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGLAKIAS  196 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~---~kl~DFGla~~~~  196 (416)
                      ||+++++|.+++....  .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||++....
T Consensus        91 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           91 EKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             EcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            9999999999997643  589999999999999999999999   9999999999999998776   9999999987653


Q ss_pred             CCCc------ceeecccccccccChhhhcc-----CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch----hhhhhh
Q 014904          197 DVNT------HVSTRVMGTFGYLAPEYASS-----GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED----SLVDWA  261 (416)
Q Consensus       197 ~~~~------~~~~~~~gt~~YlaPE~~~~-----~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~----~l~~~~  261 (416)
                      ....      .......||+.|+|||++..     ..++.++|||||||++|||++|+.||.........    ....-.
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence            2211      11223569999999999875     56889999999999999999999999765432100    000000


Q ss_pred             hHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          262 RPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       262 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...+...+..+.+. +... ...    .....+.+++.+||+.||.+||++.|+++.
T Consensus       246 ~~~~~~~i~~~~~~-~~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          246 QNMLFESIQEGKYE-FPDK-DWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHCCCC-CCHH-HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHhccCcc-cCch-hcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            01111222222211 0000 001    123578899999999999999999999873


No 151
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.6e-41  Score=330.48  Aligned_cols=261  Identities=21%  Similarity=0.305  Sum_probs=202.7

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CCcccceEEEEEe--CCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGYYTA--GSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV  118 (416)
                      .++|.+.++||+|+||.||+|.. .+++.||||+++..   ....+.+|+.++.+++ ||||+++++++.+  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            36799999999999999999995 57899999999743   3467899999999997 9999999999998  6778999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC-ceEEeecccceeccC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF-EAKVADFGLAKIASD  197 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~-~~kl~DFGla~~~~~  197 (416)
                      |||+.+++|..++.     .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++ .+||+|||+++....
T Consensus       112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            99999999999885     388999999999999999999999   999999999999999776 899999999987654


Q ss_pred             CCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH----HhHHhhhcC
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP----LLNRAIEDG  272 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~----~~~~~~~~~  272 (416)
                      ...  .....||..|+|||++.+ ..++.++|||||||++|+|++|+.||...... .+.+......    .+...+...
T Consensus       184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHh
Confidence            332  233578999999999977 67999999999999999999999999654331 1122211110    000111111


Q ss_pred             Ccc--------------cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          273 NFD--------------TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       273 ~~~--------------~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ...              ..................+.+++.+||+.||.+||++.|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            100              000000111111223467899999999999999999999986


No 152
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.4e-42  Score=328.17  Aligned_cols=257  Identities=23%  Similarity=0.342  Sum_probs=208.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTA--GSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  116 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||+|++.....  .....+.+|+.++++++||||+++++++.+  ....+
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            3578999999999999999999964 789999999986542  234578899999999999999999998864  56899


Q ss_pred             EEEEecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eeeecccCCcEEECCCCceEEeec
Q 014904          117 LVYEFVPNNTLEFHLHGK--GRPTMDWLTRLKIALGSAKGLAYLHEDCHPK-----IIHRDIKAANILLDFKFEAKVADF  189 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~-----iiHrDIkp~NILl~~~~~~kl~DF  189 (416)
                      +||||+++++|.+++...  ....+++..++.++.|++.||.|||+.   +     |+||||||+||+++.++.+||+||
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            999999999999998643  234599999999999999999999999   7     999999999999999999999999


Q ss_pred             ccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhh
Q 014904          190 GLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAI  269 (416)
Q Consensus       190 Gla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  269 (416)
                      |+++....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....   ..+        ...+
T Consensus       161 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~--------~~~i  228 (279)
T 2w5a_A          161 GLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KEL--------AGKI  228 (279)
T ss_dssp             CHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH--------HHHH
T ss_pred             chheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHH--------HHHH
Confidence            99986644322 22345789999999999999999999999999999999999999976542   111        1122


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ..+....+         +......+.+++.+||+.+|.+||++.||++.+...
T Consensus       229 ~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          229 REGKFRRI---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             HHTCCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             hhcccccC---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence            23332211         112335789999999999999999999999988654


No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.3e-41  Score=325.29  Aligned_cols=251  Identities=24%  Similarity=0.332  Sum_probs=198.7

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .++|.+.+.||+|+||.||+|.. .+++.+|+|++.... ......+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            47899999999999999999995 468999999997653 3345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeecccceec
Q 014904          121 FVPNNTLEFHLHGK--GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKIA  195 (416)
Q Consensus       121 ~~~~~sL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~~  195 (416)
                      |+++++|.+++...  ....+++..++.|+.|++.||.|||+.   +|+||||||+|||+   +.++.+||+|||+++..
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            99999999888542  224699999999999999999999999   99999999999999   45678999999999866


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      .....  .....||+.|+|||++. +.++.++||||||+++++|++|+.||......   .+..        ........
T Consensus       178 ~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~---~~~~--------~~~~~~~~  243 (285)
T 3is5_A          178 KSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE---EVQQ--------KATYKEPN  243 (285)
T ss_dssp             -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH--------HHHHCCCC
T ss_pred             CCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH---HHHh--------hhccCCcc
Confidence            54322  23467899999999886 57899999999999999999999999765421   1111        01111110


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ....   ...    ....+.+++.+||+.+|++||++.||++
T Consensus       244 ~~~~---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          244 YAVE---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CCC-----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cccc---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000   011    2346889999999999999999999985


No 154
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=5.1e-42  Score=328.25  Aligned_cols=252  Identities=25%  Similarity=0.401  Sum_probs=200.9

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEec
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV  122 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  122 (416)
                      ++|....+||+|+||.||+|.. .+++.||||++..........+.+|+.+++.++||||+++++++......++|+||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            4556666999999999999995 568899999998766555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC-CCceEEeecccceeccCCCc
Q 014904          123 PNNTLEFHLHGKG-RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF-KFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       123 ~~~sL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~-~~~~kl~DFGla~~~~~~~~  200 (416)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+.   +|+|+||||+||+++. ++.+||+|||+++.......
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence            9999999997653 33578999999999999999999999   9999999999999987 89999999999987654322


Q ss_pred             ceeecccccccccChhhhccCC--CCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          201 HVSTRVMGTFGYLAPEYASSGK--LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~--~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      . .....||+.|+|||++.++.  ++.++||||||+++|+|++|+.||....... ...  +      ......     .
T Consensus       179 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~--~------~~~~~~-----~  243 (295)
T 2clq_A          179 C-TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-AAM--F------KVGMFK-----V  243 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-HHH--H------HHHHHC-----C
T ss_pred             c-ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-HHH--H------hhcccc-----c
Confidence            2 23457899999999997654  8899999999999999999999996432211 000  0      000000     0


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      .+.+    +......+.+++.+||+.+|++||++.++++
T Consensus       244 ~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          244 HPEI----PESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCCC----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1112    2223457889999999999999999999985


No 155
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2.9e-42  Score=336.72  Aligned_cols=250  Identities=23%  Similarity=0.336  Sum_probs=181.9

Q ss_pred             CceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEEEecCCCC
Q 014904           49 ANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVPNNT  126 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~~s  126 (416)
                      .++||+|+||.||+|.+. +++.||||++...   ....+..|+.++.++. ||||+++++++.+....++||||+++++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            378999999999999964 6899999999743   3467889999999997 9999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC---ceEEeecccceeccCCCccee
Q 014904          127 LEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF---EAKVADFGLAKIASDVNTHVS  203 (416)
Q Consensus       127 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~---~~kl~DFGla~~~~~~~~~~~  203 (416)
                      |.+++....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++   .+||+|||+++........ .
T Consensus        93 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~  166 (325)
T 3kn6_A           93 LFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L  166 (325)
T ss_dssp             HHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred             HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence            999997653  699999999999999999999999   999999999999997665   7999999999876543322 3


Q ss_pred             ecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccc-hhhhhhhhHHhHHhhhcCCcccccCccc
Q 014904          204 TRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE-DSLVDWARPLLNRAIEDGNFDTLVDPKL  282 (416)
Q Consensus       204 ~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~d~~l  282 (416)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ....+     +...+..+.+..      
T Consensus       167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-----~~~~i~~~~~~~------  235 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-----IMKKIKKGDFSF------  235 (325)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-----HHHHHTTTCCCC------
T ss_pred             cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-----HHHHHHcCCCCC------
Confidence            345789999999999999999999999999999999999999976443111 11111     112222332210      


Q ss_pred             cCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          283 HNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       283 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...........+.+++.+||+.+|.+||++.||++.
T Consensus       236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            010011234578999999999999999999998743


No 156
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.8e-42  Score=338.23  Aligned_cols=262  Identities=15%  Similarity=0.208  Sum_probs=207.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCC---------CcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccc---------
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPN---------GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVS---------  104 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  104 (416)
                      .++|.+.+.||+|+||.||+|....         ++.||||++...     ..+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3789999999999999999999653         789999999754     36789999999999999987         


Q ss_pred             ------eEEEEEe-CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEE
Q 014904          105 ------LVGYYTA-GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANIL  177 (416)
Q Consensus       105 ------l~~~~~~-~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NIL  177 (416)
                            +++++.. ....++||||+ +++|.+++.......+++..++.|+.|++.||.|||+.   +|+||||||+|||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl  191 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF  191 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence                  6788876 78899999999 99999999866445799999999999999999999999   9999999999999


Q ss_pred             ECCCC--ceEEeecccceeccCCCcc------eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCC
Q 014904          178 LDFKF--EAKVADFGLAKIASDVNTH------VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDST  249 (416)
Q Consensus       178 l~~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~  249 (416)
                      ++.++  .+||+|||+++........      ......||+.|+|||++.+..++.++|||||||+||||++|+.||...
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            99998  8999999999876543221      113357999999999999999999999999999999999999999765


Q ss_pred             CcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          250 HTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ... ...+..+....      ......+.+.....   ......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       272 ~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          272 LPN-TEDIMKQKQKF------VDKPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             TTC-HHHHHHHHHHH------HHSCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             CcC-HHHHHHHHHhc------cCChhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            421 11122111111      11111222211110   112357899999999999999999999999998643


No 157
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=4.3e-42  Score=329.77  Aligned_cols=256  Identities=28%  Similarity=0.378  Sum_probs=201.3

Q ss_pred             CCCCcCceecccCcEEEEEEEeCC----CcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPN----GKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYYTA-GSQRML  117 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l  117 (416)
                      .+|.+.++||+|+||.||+|.+.+    ...+|||.+...... ....+.+|+.++++++||||+++++++.. ....++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            467888999999999999999543    236899998764432 33578899999999999999999999654 567899


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|.+++.... ..+++..++.|+.|++.||.|||+.   +|+||||||+||+++.++.+||+|||+++....
T Consensus       105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence            999999999999997543 3689999999999999999999999   999999999999999999999999999986644


Q ss_pred             CCcc---eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCC
Q 014904          198 VNTH---VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGN  273 (416)
Q Consensus       198 ~~~~---~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~  273 (416)
                      ....   ......+|+.|+|||.+.+..++.++||||||+++++|++ |..||.......   +..        .+..+.
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~--------~~~~~~  249 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV--------YLLQGR  249 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHH--------HHHTTC
T ss_pred             cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHH--------HHhcCC
Confidence            3221   2233567889999999999999999999999999999999 555555433211   111        111111


Q ss_pred             cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          274 FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       274 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ..  ..       +......+.+++.+||+.+|.+||++.||++.|+...
T Consensus       250 ~~--~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          250 RL--LQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             CC--CC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC--CC-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            10  01       1112347899999999999999999999999998643


No 158
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=7.3e-42  Score=329.59  Aligned_cols=251  Identities=22%  Similarity=0.377  Sum_probs=205.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||+++.........+.+|+.++.+++||||+++++++.+....++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            4578999999999999999999964 789999999987655455678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeecccceeccC
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~~~~  197 (416)
                      |+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||++   +.++.+||+|||+++....
T Consensus        87 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           87 LVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             CCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             cCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            999999999886543  589999999999999999999999   99999999999999   7889999999999876543


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .   ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.....   ..+        ...+..+.+. +
T Consensus       162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~--------~~~i~~~~~~-~  226 (304)
T 2jam_A          162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE---SKL--------FEKIKEGYYE-F  226 (304)
T ss_dssp             B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH---HHH--------HHHHHHCCCC-C
T ss_pred             C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHH--------HHHHHcCCCC-C
Confidence            2   12335689999999999999999999999999999999999999976432   111        1112222211 1


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       .    ..........+.+++.+||+.+|.+||++.|+++
T Consensus       227 -~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          227 -E----SPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             -C----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             -C----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             0    1111223457899999999999999999999986


No 159
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.9e-42  Score=343.99  Aligned_cols=274  Identities=22%  Similarity=0.264  Sum_probs=213.3

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCC--eEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGS--QRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV  118 (416)
                      .++|.+.++||+|+||.||+|.+. +|+.||||++.... ......+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            467999999999999999999965 58999999997543 233467889999999999999999999998755  78999


Q ss_pred             EEecCCCCHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE----CCCCceEEeecccce
Q 014904          119 YEFVPNNTLEFHLHGKGR-PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL----DFKFEAKVADFGLAK  193 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl----~~~~~~kl~DFGla~  193 (416)
                      |||+++++|.+++..... ..+++..++.++.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999976432 2499999999999999999999999   99999999999999    788889999999998


Q ss_pred             eccCCCcceeecccccccccChhhhcc--------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASS--------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL  265 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~--------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~  265 (416)
                      .......  .....||+.|+|||++.+        ..++.++|||||||++|||++|+.||.........  .+.....+
T Consensus       165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~  240 (396)
T 4eut_A          165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKII  240 (396)
T ss_dssp             ECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHH
T ss_pred             EccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHh
Confidence            7654332  233569999999999865        56788999999999999999999999754321110  11111111


Q ss_pred             HHh----------hhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          266 NRA----------IEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       266 ~~~----------~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ...          ...+.+...-+..............+..++.+||+.||++||++.|+++.|+...
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence            000          0011111000111223445677888999999999999999999999999997543


No 160
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.9e-42  Score=335.98  Aligned_cols=254  Identities=28%  Similarity=0.427  Sum_probs=203.8

Q ss_pred             CCCCcCceecccCcEEEEEEEeC-CCcEE--EEEEeecCC-cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP-NGKEV--AIKQLKAGS-GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~v--avK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ++|.+.+.||+|+||.||+|... ++..+  |||.++... ....+.+.+|+.++.++ +||||+++++++.+....++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            68899999999999999999954 56644  999987532 23345789999999999 899999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCce
Q 014904          119 YEFVPNNTLEFHLHGKG--------------RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA  184 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~  184 (416)
                      |||+++++|.+++....              ...+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence            99999999999997643              24689999999999999999999999   99999999999999999999


Q ss_pred             EEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhH
Q 014904          185 KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARP  263 (416)
Q Consensus       185 kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~  263 (416)
                      ||+|||+++......  ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......   .+      
T Consensus       182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~------  250 (327)
T 1fvr_A          182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---EL------  250 (327)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HH------
T ss_pred             EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH---HH------
Confidence            999999987433211  1233457889999999998889999999999999999998 99999765421   11      


Q ss_pred             HhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          264 LLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       264 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                        ...+..+..         ...+......+.+++.+||+.+|.+||++.|+++.|+..
T Consensus       251 --~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  298 (327)
T 1fvr_A          251 --YEKLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  298 (327)
T ss_dssp             --HHHGGGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --HHHhhcCCC---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              111112210         111122345789999999999999999999999999854


No 161
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.3e-41  Score=336.76  Aligned_cols=254  Identities=16%  Similarity=0.141  Sum_probs=206.1

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEE------eCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC---CCcccceEEE
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGV------LPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH---HKHLVSLVGY  108 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~  108 (416)
                      ++....++|.+.++||+|+||.||+|+      ..+++.||||+++...   ..++..|+.++.+++   |+||++++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            334456789999999999999999994      4568999999997543   457888888888887   8999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC-----
Q 014904          109 YTAGSQRMLVYEFVPNNTLEFHLHGK---GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF-----  180 (416)
Q Consensus       109 ~~~~~~~~lV~e~~~~~sL~~~l~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~-----  180 (416)
                      +......++||||+++++|.+++...   ....+++..++.|+.|++.||+|||+.   +|+||||||+||||+.     
T Consensus       136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred             eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence            99999999999999999999999642   234699999999999999999999998   9999999999999998     


Q ss_pred             ------CCceEEeecccceeccCC-CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCccc
Q 014904          181 ------KFEAKVADFGLAKIASDV-NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV  253 (416)
Q Consensus       181 ------~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~  253 (416)
                            ++.+||+|||+++..... .........||++|+|||++.+..++.++|||||||++|||+||+.||...... 
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-  291 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-  291 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-
T ss_pred             cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-
Confidence                  899999999999865422 233345578999999999999999999999999999999999999998543220 


Q ss_pred             chhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCC-CCHHHHHHHhccc
Q 014904          254 EDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRR-PRMSQIVRALEGD  322 (416)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R-Pt~~evv~~L~~~  322 (416)
                           .|                .+...+....   ....+.+++..|++.+|.+| |++.++.+.|+..
T Consensus       292 -----~~----------------~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          292 -----EC----------------KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             -----EE----------------EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             -----ce----------------eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence                 00                0011111111   13467789999999999998 5788888888754


No 162
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=2.5e-42  Score=338.66  Aligned_cols=243  Identities=24%  Similarity=0.336  Sum_probs=203.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc--------cHHHHHHHHHHHHhcCCCcccceEEEEEeC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ--------GEREFQAEVEIISRVHHKHLVSLVGYYTAG  112 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  112 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++......        ....+..|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            457899999999999999999994 57899999999865321        123577899999999999999999999999


Q ss_pred             CeEEEEEEecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccc
Q 014904          113 SQRMLVYEFVPNN-TLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGL  191 (416)
Q Consensus       113 ~~~~lV~e~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGl  191 (416)
                      ...++||||+.++ +|..++....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~  176 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS  176 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence            9999999998776 9999987654  599999999999999999999999   999999999999999999999999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      ++.......  .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......                . 
T Consensus       177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------~-  237 (335)
T 3dls_A          177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------V-  237 (335)
T ss_dssp             CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------T-
T ss_pred             ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------H-
Confidence            987654332  234679999999999988776 88999999999999999999999652210                0 


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...    ..+  ..    .....+.+++.+||+.+|.+||++.||++.
T Consensus       238 ~~~----~~~--~~----~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          238 EAA----IHP--PY----LVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             TTC----CCC--SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             hhc----cCC--Cc----ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000    000  01    123468899999999999999999999874


No 163
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-42  Score=340.89  Aligned_cols=255  Identities=25%  Similarity=0.338  Sum_probs=206.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEe----CCCcEEEEEEeecCC----cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL----PNGKEVAIKQLKAGS----GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGS  113 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  113 (416)
                      .++|.+.++||+|+||.||+|..    .+++.||||+++...    ......+..|+.++.++ +|+||+++++++....
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            47899999999999999999996    378999999987432    12234577899999999 6999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            9999999999999999997543  589999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCCcceeecccccccccChhhhccC--CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASSG--KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~~--~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      ..............||+.|+|||++.++  .++.++|||||||+||||++|+.||.......  ....+.....     .
T Consensus       208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~-----~  280 (355)
T 1vzo_A          208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRIL-----K  280 (355)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHH-----H
T ss_pred             ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHh-----c
Confidence            7655444444557899999999999863  47899999999999999999999997544321  1111111111     1


Q ss_pred             CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHHh
Q 014904          272 GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRP-----RMSQIVRAL  319 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----t~~evv~~L  319 (416)
                      ..      +.    ++......+.+++.+||+.+|.+||     ++.|+++..
T Consensus       281 ~~------~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          281 SE------PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             CC------CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             cC------CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            11      11    1222335788999999999999999     999998764


No 164
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.2e-41  Score=324.07  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=203.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc------ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG------QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      .++|.+.+.||+|+||.||+|... +++.||||+++....      .....+.+|+.++++++||||+++++++.+....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            467899999999999999999965 689999999975432      2356899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC----ceEEeeccc
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF----EAKVADFGL  191 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~----~~kl~DFGl  191 (416)
                      ++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++    .+||+|||+
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            99999999999999997543  589999999999999999999999   999999999999998877    799999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      +........  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......  ..+.         .+..
T Consensus       159 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~---------~~~~  225 (283)
T 3bhy_A          159 AHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLT---------NISA  225 (283)
T ss_dssp             CEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH---------HHHT
T ss_pred             ceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHH---------HhHh
Confidence            987654322  23456899999999999999999999999999999999999999764421  1111         1111


Q ss_pred             CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          272 GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ....  .++....    .....+.+++.+||+.+|.+||++.|+++
T Consensus       226 ~~~~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          226 VNYD--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             TCCC--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cccC--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            1110  0011111    12346889999999999999999999986


No 165
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.7e-42  Score=326.13  Aligned_cols=253  Identities=24%  Similarity=0.359  Sum_probs=206.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+....++|+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            3568999999999999999999964 789999999975432 33467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        85 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           85 EYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             ECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             EecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence            9999999999886543  589999999999999999999999   99999999999999999999999999998664332


Q ss_pred             c-ceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          200 T-HVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       200 ~-~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      . .......||+.|+|||.+.+..+ +.++||||||+++++|++|+.||...... ...+..|..        ....   
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~--------~~~~---  227 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-CQEYSDWKE--------KKTY---  227 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT-SHHHHHHHT--------TCTT---
T ss_pred             chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH-HHHHHHhhh--------cccc---
Confidence            2 22344678999999999987665 78999999999999999999999765431 112222211        1000   


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ..      ........+.+++.+||+.+|.+||++.||++
T Consensus       228 ~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          228 LN------PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             ST------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cC------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            00      01122346889999999999999999999986


No 166
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.7e-42  Score=333.68  Aligned_cols=260  Identities=25%  Similarity=0.400  Sum_probs=203.5

Q ss_pred             cCHHHHHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEe
Q 014904           34 FTYEELARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTA  111 (416)
Q Consensus        34 f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  111 (416)
                      +++.++....++|.+.+.||+|+||.||+|.+ .+++.||||++.... .....+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            45556667889999999999999999999996 578999999997543 3346789999999999 89999999999987


Q ss_pred             ------CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceE
Q 014904          112 ------GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAK  185 (416)
Q Consensus       112 ------~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~k  185 (416)
                            ....++||||+++++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k  169 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK  169 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence                  46889999999999999999865545789999999999999999999999   999999999999999999999


Q ss_pred             EeecccceeccCCCcceeecccccccccChhhhc-----cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhh
Q 014904          186 VADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS-----SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDW  260 (416)
Q Consensus       186 l~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~-----~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~  260 (416)
                      |+|||++........ ......||+.|+|||++.     +..++.++|||||||++|+|++|+.||.......  .+.  
T Consensus       170 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~--  244 (326)
T 2x7f_A          170 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALF--  244 (326)
T ss_dssp             ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHH--
T ss_pred             EeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHH--
Confidence            999999886543222 223457899999999987     5678999999999999999999999997644311  110  


Q ss_pred             hhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          261 ARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                            . +..+....+..    .    .....+.+++.+||+.+|.+||++.+|++
T Consensus       245 ------~-~~~~~~~~~~~----~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          245 ------L-IPRNPAPRLKS----K----KWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             ------H-HHHSCCCCCSC----S----CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ------H-hhcCccccCCc----c----ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                  0 11111111111    1    12347889999999999999999999986


No 167
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=6.7e-42  Score=329.47  Aligned_cols=249  Identities=28%  Similarity=0.444  Sum_probs=208.0

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .+.|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            36799999999999999999995 468999999997654 3345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+++++|.+++...   .+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++........
T Consensus       101 ~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A          101 YLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             CCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred             eCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence            99999999998643   589999999999999999999999   999999999999999999999999999987654332


Q ss_pred             ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCc
Q 014904          201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDP  280 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~  280 (416)
                      . .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......   ....        .+..+..     +
T Consensus       175 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~--------~~~~~~~-----~  237 (303)
T 3a7i_A          175 K-RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---KVLF--------LIPKNNP-----P  237 (303)
T ss_dssp             C-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH--------HHHHSCC-----C
T ss_pred             c-cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH---HHHH--------HhhcCCC-----C
Confidence            2 23457899999999999999999999999999999999999999764431   1111        1111211     1


Q ss_pred             cccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          281 KLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       281 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .+...+    ...+.+++.+||+.+|.+||++.||++.
T Consensus       238 ~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          238 TLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CCCSSC----CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             CCcccc----CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            122222    3468899999999999999999999874


No 168
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=4.7e-42  Score=335.26  Aligned_cols=268  Identities=22%  Similarity=0.367  Sum_probs=202.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc--HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG--EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|.+.++||+|+||.||+|... +|+.||||++.......  .+.+.+|+.++++++||||+++++++.+....++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            3478999999999999999999964 58999999987654332  34678999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+.+++|..++....  .+++..++.++.+++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       103 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  177 (331)
T 4aaa_A          103 FEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  177 (331)
T ss_dssp             EECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             EecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence            99999999998876544  589999999999999999999999   9999999999999999999999999999865443


Q ss_pred             CcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhh------HHhHHhh-h
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWAR------PLLNRAI-E  270 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~------~~~~~~~-~  270 (416)
                      .. ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.......  .+.....      +...... .
T Consensus       178 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          178 GE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHH
T ss_pred             cc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhh
Confidence            22 22345689999999999875 78999999999999999999999997754321  1111110      0000000 0


Q ss_pred             cCCcccccCccccCcCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          271 DGNFDTLVDPKLHNEYN-----HNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ...+.....+.+....+     ......+.+++.+||+.+|.+||++.||++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11111111111111111     123467899999999999999999999885


No 169
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=8.7e-42  Score=324.45  Aligned_cols=245  Identities=20%  Similarity=0.286  Sum_probs=200.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG--QGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  117 (416)
                      .+++|.+.+.||+|+||.||+|... +++.||||++.....  ....++.+|+.++..+ +||||+++++++.+....++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            4578999999999999999999965 799999999986432  3346788999999999 99999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC--------------
Q 014904          118 VYEFVPNNTLEFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK--------------  181 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~--------------  181 (416)
                      ||||+++++|.+++....  ...+++..++.|+.|++.||.|||+.   +|+||||||+|||++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            999999999999997542  13689999999999999999999999   99999999999999844              


Q ss_pred             -----CceEEeecccceeccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch
Q 014904          182 -----FEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED  255 (416)
Q Consensus       182 -----~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~  255 (416)
                           ..+||+|||++........     ..||+.|+|||++.+. .++.++|||||||++++|++|+.++.....    
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----  236 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----  236 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCC-----CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----
T ss_pred             ccCCceEEEEcccccccccCCccc-----cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----
Confidence                 4799999999987654322     3589999999999866 567899999999999999999887643211    


Q ss_pred             hhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          256 SLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       256 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       .         ..+..+....     +...    ....+.+++.+||+.+|.+||++.|+++
T Consensus       237 -~---------~~~~~~~~~~-----~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          237 -W---------HEIRQGRLPR-----IPQV----LSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             -H---------HHHHTTCCCC-----CSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -H---------HHHHcCCCCC-----CCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence             1         1112222211     1122    2357899999999999999999999985


No 170
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=9.4e-42  Score=336.80  Aligned_cols=287  Identities=20%  Similarity=0.270  Sum_probs=207.5

Q ss_pred             cCHHHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcc-----------cHHHHHHHHHHHHhcCCCcc
Q 014904           34 FTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQ-----------GEREFQAEVEIISRVHHKHL  102 (416)
Q Consensus        34 f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~ni  102 (416)
                      ....++..+.++|.+.+.||+|+||.||+|...+|+.||||++......           ..+.+.+|+.++.+++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            4567899999999999999999999999999888999999998643221           12678999999999999999


Q ss_pred             cceEEEEEe-----CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEE
Q 014904          103 VSLVGYYTA-----GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANIL  177 (416)
Q Consensus       103 v~l~~~~~~-----~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NIL  177 (416)
                      +++++++..     ....++||||+. ++|.+.+.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL  166 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence            999999865     336899999997 57777776443 3699999999999999999999999   9999999999999


Q ss_pred             ECCCCceEEeecccceeccCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch-
Q 014904          178 LDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED-  255 (416)
Q Consensus       178 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~-  255 (416)
                      ++.++.+||+|||+++.......  .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... 
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EcCCCCEEEEecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999999975443222  234578999999999877 67999999999999999999999999865431110 


Q ss_pred             hhhh------------hhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--hcc
Q 014904          256 SLVD------------WARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA--LEG  321 (416)
Q Consensus       256 ~l~~------------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~--L~~  321 (416)
                      .+..            +..+.....+. .......... ...........+.+++.+||+.+|.+||++.|+++.  ++.
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  322 (362)
T 3pg1_A          245 KIVEVVGTPKIEDVVMFSSPSARDYLR-NSLSNVPARA-WTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES  322 (362)
T ss_dssp             HHHHHHCCCCHHHHHHTSCHHHHHHTT-TCCCCCCCCC-HHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHcCCCChHHhhhccchhhhHHHH-hhcccCChhh-HHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence            0000            00000111110 0111110000 001111223568899999999999999999999964  444


Q ss_pred             ccCccccc
Q 014904          322 DASLADLN  329 (416)
Q Consensus       322 ~~~~~~~~  329 (416)
                      .....++.
T Consensus       323 ~~~~~~~~  330 (362)
T 3pg1_A          323 LFDPLDLT  330 (362)
T ss_dssp             TCCGGGGT
T ss_pred             ccCccccc
Confidence            43333333


No 171
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=5.3e-43  Score=340.80  Aligned_cols=255  Identities=23%  Similarity=0.340  Sum_probs=188.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CCcccceEEEEEe--------
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGYYTA--------  111 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--------  111 (416)
                      ...+|++.++||+|+||.||+|.+ .+++.||||++........+.+.+|+.++.++. ||||+++++++..        
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            346899999999999999999995 478999999997766555678899999999996 9999999999953        


Q ss_pred             CCeEEEEEEecCCCCHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeecccCCcEEECCCCceEEee
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHG-KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK--IIHRDIKAANILLDFKFEAKVAD  188 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--iiHrDIkp~NILl~~~~~~kl~D  188 (416)
                      ....++|+||+. ++|.+++.. .....+++..++.|+.|++.||.|||+.   +  |+||||||+||||+.++.+||+|
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D  181 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD  181 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence            345799999995 688877754 2233699999999999999999999998   7  99999999999999999999999


Q ss_pred             cccceeccCCCcce-----------eecccccccccChhhh---ccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccc
Q 014904          189 FGLAKIASDVNTHV-----------STRVMGTFGYLAPEYA---SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE  254 (416)
Q Consensus       189 FGla~~~~~~~~~~-----------~~~~~gt~~YlaPE~~---~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~  254 (416)
                      ||+++.........           .....||+.|+|||++   .+..++.++|||||||++|+|++|+.||......  
T Consensus       182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--  259 (337)
T 3ll6_A          182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--  259 (337)
T ss_dssp             CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence            99998765432211           1134689999999998   5667899999999999999999999999653321  


Q ss_pred             hhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          255 DSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       255 ~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                       .+            ..+....        .........+.+++.+||+.+|.+||++.||++.|+...
T Consensus       260 -~~------------~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          260 -RI------------VNGKYSI--------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             -------------------CCC--------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -Hh------------hcCcccC--------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             00            0111110        001111234788999999999999999999999998543


No 172
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1.3e-41  Score=348.83  Aligned_cols=247  Identities=27%  Similarity=0.397  Sum_probs=206.4

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|.+. +|+.||||++....   ......+.+|+.+++.++||||+++++++......++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            478999999999999999999965 79999999997532   12345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++...+  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        95 ~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           95 MEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             EECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            99999999999997543  589999999999999999999999   9999999999999999999999999999876543


Q ss_pred             CcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                      .  ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......   .        +...+..+.+.  
T Consensus       170 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~--------~~~~i~~~~~~--  234 (476)
T 2y94_A          170 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---T--------LFKKICDGIFY--  234 (476)
T ss_dssp             C--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---H--------HHHHHHTTCCC--
T ss_pred             c--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---H--------HHHHHhcCCcC--
Confidence            2  2234579999999999988765 78999999999999999999999764431   1        11122223221  


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                          ...    .....+.+++.+||+.||.+||++.||++
T Consensus       235 ----~p~----~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          235 ----TPQ----YLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             ----CCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ----CCc----cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                111    12346889999999999999999999996


No 173
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=8.7e-42  Score=356.17  Aligned_cols=254  Identities=26%  Similarity=0.401  Sum_probs=210.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.++||+|+||.||+|... +|+.||||++....   ......+.+|+.++..++||||+++++++.+....++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3467999999999999999999964 79999999997532   2334568899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|..++...+...+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++....
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            99999999999999876655699999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccc-hhhhhhhhHHhHHhhhcCCccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE-DSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+..        .+....   
T Consensus       339 ~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~--------~i~~~~---  405 (576)
T 2acx_A          339 GQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER--------LVKEVP---  405 (576)
T ss_dssp             TCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH--------HHHHCC---
T ss_pred             Ccc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH--------Hhhccc---
Confidence            332  2345799999999999998999999999999999999999999987543211 11111        111111   


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRP-----RMSQIVRA  318 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----t~~evv~~  318 (416)
                             ..++......+.+++.+||+.||.+||     ++.||++.
T Consensus       406 -------~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          406 -------EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             -------ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence                   111222335789999999999999999     67888753


No 174
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=9.9e-42  Score=332.79  Aligned_cols=259  Identities=21%  Similarity=0.307  Sum_probs=206.7

Q ss_pred             HHHHhhCCCCcC-ceecccCcEEEEEEEeC-CCcEEEEEEeecCC--cccHHHHHHHHHHHHhc-CCCcccceEEEEEeC
Q 014904           38 ELARATDGFSDA-NLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS--GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAG  112 (416)
Q Consensus        38 el~~~t~~f~~~-~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  112 (416)
                      ......++|.+. +.||+|+||.||+|... +++.||||+++...  ......+.+|+.++.++ +||||+++++++.+.
T Consensus        22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT  101 (327)
T ss_dssp             CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence            344566788887 89999999999999964 68999999997542  33457889999999999 569999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC---CCceEEeec
Q 014904          113 SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF---KFEAKVADF  189 (416)
Q Consensus       113 ~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~---~~~~kl~DF  189 (416)
                      ...++||||+.+++|.+++.......+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+||
T Consensus       102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A          102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence            9999999999999999998766556799999999999999999999999   9999999999999988   789999999


Q ss_pred             ccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhh
Q 014904          190 GLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAI  269 (416)
Q Consensus       190 Gla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~  269 (416)
                      |+++.......  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||.......  .+.         .+
T Consensus       179 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~---------~i  245 (327)
T 3lm5_A          179 GMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYL---------NI  245 (327)
T ss_dssp             GGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH---------HH
T ss_pred             ccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHH---------HH
Confidence            99987654322  234579999999999999999999999999999999999999997654311  110         01


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ......      ............+.+++.+||+.+|.+||++.|+++.
T Consensus       246 ~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          246 SQVNVD------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHTCCC------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             Hhcccc------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            111110      1111112234578899999999999999999999854


No 175
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.9e-42  Score=337.35  Aligned_cols=266  Identities=28%  Similarity=0.416  Sum_probs=208.9

Q ss_pred             CHHHHHH-hhCCCCcCceecccCcEEEEEEEe------CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceE
Q 014904           35 TYEELAR-ATDGFSDANLLGQGGFGYVHRGVL------PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLV  106 (416)
Q Consensus        35 ~~~el~~-~t~~f~~~~~LG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~  106 (416)
                      +..++.. ..++|.+.+.||+|+||.||+|.+      .+++.||||++.... ......+.+|+.++++++||||++++
T Consensus        20 s~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   99 (327)
T 2yfx_A           20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI   99 (327)
T ss_dssp             CGGGSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             chhhcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEE
Confidence            3444432 357999999999999999999983      357789999997543 33345788999999999999999999


Q ss_pred             EEEEeCCeEEEEEEecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC-
Q 014904          107 GYYTAGSQRMLVYEFVPNNTLEFHLHGKGR-----PTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF-  180 (416)
Q Consensus       107 ~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~-  180 (416)
                      +++.+....++||||+++++|.+++.....     ..+++..++.++.|++.||.|||+.   +|+||||||+|||++. 
T Consensus       100 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~  176 (327)
T 2yfx_A          100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP  176 (327)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCS
T ss_pred             EEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecC
Confidence            999999999999999999999999976532     3589999999999999999999999   9999999999999984 


Q ss_pred             --CCceEEeecccceeccCCCc-ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchh
Q 014904          181 --KFEAKVADFGLAKIASDVNT-HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDS  256 (416)
Q Consensus       181 --~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~  256 (416)
                        +..+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|+|++ |+.||.....   ..
T Consensus       177 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~  253 (327)
T 2yfx_A          177 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---QE  253 (327)
T ss_dssp             STTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HH
T ss_pred             CCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---HH
Confidence              45699999999975543222 22334578999999999999999999999999999999998 9999876432   11


Q ss_pred             hhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          257 LVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       257 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      +..        .+..+...     .    .+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       254 ~~~--------~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          254 VLE--------FVTSGGRM-----D----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHH--------HHHTTCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHH--------HHhcCCCC-----C----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            111        11222111     1    11223357889999999999999999999999998644


No 176
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.7e-42  Score=343.62  Aligned_cols=255  Identities=29%  Similarity=0.408  Sum_probs=193.9

Q ss_pred             CCCcCceecccCcEEEEEEEeC--CC--cEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeEEEE
Q 014904           45 GFSDANLLGQGGFGYVHRGVLP--NG--KEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTA-GSQRMLV  118 (416)
Q Consensus        45 ~f~~~~~LG~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV  118 (416)
                      .|...++||+|+||.||+|.+.  ++  ..||||.++.... ...+.|.+|+.++++++||||++++++|.. ....++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3556689999999999999953  22  3689999875432 334679999999999999999999999764 4578999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++..... .+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus       170 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             EECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EECCCCCCHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence            999999999999975443 689999999999999999999999   9999999999999999999999999999865433


Q ss_pred             Ccc---eeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          199 NTH---VSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       199 ~~~---~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ...   ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.......   +..        .+..+..
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~--------~~~~~~~  314 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV--------YLLQGRR  314 (373)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHH--------HHHTTCC
T ss_pred             ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHH--------HHHcCCC
Confidence            221   1233567889999999999999999999999999999999 677776543311   111        1112211


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                        ...       +...+..+.+++.+||+.+|++||++.||++.|+...
T Consensus       315 --~~~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          315 --LLQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             --CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --CCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence              111       1123357899999999999999999999999998643


No 177
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=2.7e-42  Score=331.11  Aligned_cols=258  Identities=24%  Similarity=0.408  Sum_probs=187.6

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++.... .....++.+|+.++.+++||||+++++++......++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            457899999999999999999994 478999999987543 233457889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhc------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          120 EFVPNNTLEFHLHG------KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       120 e~~~~~sL~~~l~~------~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ||+++++|.+++..      .....+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++.
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            99999999998863      1234689999999999999999999999   99999999999999999999999999987


Q ss_pred             eccCCCc----ceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHh
Q 014904          194 IASDVNT----HVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRA  268 (416)
Q Consensus       194 ~~~~~~~----~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~  268 (416)
                      .......    .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||........  +.        ..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~--------~~  239 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LM--------LT  239 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HH--------HH
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HH--------HH
Confidence            6543221    11234578999999999876 5689999999999999999999999977543211  00        00


Q ss_pred             hhcCCccc----ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          269 IEDGNFDT----LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       269 ~~~~~~~~----~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      . .+....    ..++.....+    ...+.+++.+||+.+|.+||++.||++
T Consensus       240 ~-~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          240 L-QNDPPSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             H-TSSCCCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             h-ccCCCccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            1 111111    1111122222    347889999999999999999999986


No 178
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3e-41  Score=324.76  Aligned_cols=253  Identities=22%  Similarity=0.317  Sum_probs=201.0

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC----cccHHHHHHHHHHHHhcCCCcccceEEEEE--eCC
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS----GQGEREFQAEVEIISRVHHKHLVSLVGYYT--AGS  113 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~  113 (416)
                      +..++|.+.+.||+|+||.||+|.. .+++.||||+++...    ......+.+|+.++++++|+||+++++++.  +..
T Consensus         2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred             ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence            3568999999999999999999996 468999999997532    233467899999999999999999999984  456


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..++||||+.++ |.+++.......+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++.
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE  157 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence            789999999877 76777655555799999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCC-cceeecccccccccChhhhccCC--CCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          194 IASDVN-THVSTRVMGTFGYLAPEYASSGK--LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       194 ~~~~~~-~~~~~~~~gt~~YlaPE~~~~~~--~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      ...... ........||+.|+|||++.+..  .+.++||||||+++|+|++|+.||.....      ...     ...+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~-----~~~i~  226 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------YKL-----FENIG  226 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHH-----HHHHH
T ss_pred             ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH------HHH-----HHHHh
Confidence            765322 22234457899999999997654  37899999999999999999999976432      111     11122


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .+..      .+..    .....+.+++.+||+.+|.+||++.|+++.
T Consensus       227 ~~~~------~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          227 KGSY------AIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HCCC------CCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             cCCC------CCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            2221      1111    233578899999999999999999999964


No 179
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=3e-41  Score=336.06  Aligned_cols=267  Identities=23%  Similarity=0.290  Sum_probs=204.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC--------CCcccceEEEEE---
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH--------HKHLVSLVGYYT---  110 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  110 (416)
                      .++|.+.++||+|+||.||+|.. .+++.||||+++... .....+.+|+.+++.++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            47899999999999999999995 468899999997532 33457889999999985        788999999987   


Q ss_pred             -eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC-------
Q 014904          111 -AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF-------  182 (416)
Q Consensus       111 -~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~-------  182 (416)
                       .....++||||+ +++|.+.+.......+++..++.|+.|++.||.|||+.+  +|+||||||+||||+.++       
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence             456789999999 555555555444446999999999999999999999975  899999999999999775       


Q ss_pred             ------------------------------------------ceEEeecccceeccCCCcceeecccccccccChhhhcc
Q 014904          183 ------------------------------------------EAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASS  220 (416)
Q Consensus       183 ------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~  220 (416)
                                                                .+||+|||+++.....    .....||+.|+|||++.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence                                                      7999999999876543    233578999999999999


Q ss_pred             CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh-------HHhhh-----------cCCcccccCccc
Q 014904          221 GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL-------NRAIE-----------DGNFDTLVDPKL  282 (416)
Q Consensus       221 ~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~-------~~~~~-----------~~~~~~~~d~~l  282 (416)
                      ..++.++|||||||+||||++|+.||..........-.+......       ...+.           .+....+.+...
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP  347 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence            999999999999999999999999998654321111000000000       00000           111111111000


Q ss_pred             ---------cCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          283 ---------HNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       283 ---------~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                               ....+......+.+|+.+||+.||++||++.||++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                     11345677788999999999999999999999985


No 180
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2e-41  Score=338.21  Aligned_cols=204  Identities=25%  Similarity=0.441  Sum_probs=165.1

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC--cccHHHHHHHHHHHHhcC-CCcccceEEEEEeCC--e
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS--GQGEREFQAEVEIISRVH-HKHLVSLVGYYTAGS--Q  114 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~  114 (416)
                      ...++|.+.+.||+|+||.||+|.+ .+|+.||||++....  ......+.+|+.++..+. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            4568999999999999999999995 578999999986432  233456788999999997 999999999998644  6


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      .++||||+. ++|..++...   .+++..+..++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++.
T Consensus        86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            899999997 5888888753   589999999999999999999999   999999999999999999999999999986


Q ss_pred             ccCC--------------------CcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCc
Q 014904          195 ASDV--------------------NTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHT  251 (416)
Q Consensus       195 ~~~~--------------------~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~  251 (416)
                      ....                    .....+...||+.|+|||++.+ ..++.++|||||||+++||++|+.||.....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            5331                    1112244679999999999976 6799999999999999999999999987543


No 181
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.1e-41  Score=327.41  Aligned_cols=253  Identities=23%  Similarity=0.371  Sum_probs=200.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||+|++..........+..|+.++..++||||+++++++......++|+|
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4578999999999999999999965 589999999987666667789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+++++|..++..... .+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++....... 
T Consensus        97 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  171 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-  171 (302)
T ss_dssp             CCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-
T ss_pred             eCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-
Confidence            9999999998865332 589999999999999999999999   99999999999999999999999999975432211 


Q ss_pred             ceeecccccccccChhhh-----ccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          201 HVSTRVMGTFGYLAPEYA-----SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~-----~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      .......||+.|+|||++     ....++.++||||||+++|+|++|+.||......  ..+        .. +..+...
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~--------~~-~~~~~~~  240 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVL--------LK-IAKSDPP  240 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHH--------HH-HHHSCCC
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHH--------HH-HhccCCc
Confidence            112335689999999998     3667899999999999999999999999765431  111        11 1112211


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ....       +......+.+++.+||+.+|.+||++.+|++
T Consensus       241 ~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          241 TLLT-------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             CCSS-------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ccCC-------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            1111       1122357889999999999999999999875


No 182
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.2e-41  Score=324.48  Aligned_cols=249  Identities=20%  Similarity=0.342  Sum_probs=206.4

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc---ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG---QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|... +++.||+|++.....   .....+.+|+.+++.++|+||+++++++.+....++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            468899999999999999999965 588999999875432   2345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++......
T Consensus        94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence            99999999999886543  589999999999999999999999   9999999999999999999999999999876533


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      .. ......||+.|+|||++.+..++.++||||||+++++|++|+.||......  +..         ..+..+..    
T Consensus       169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~---------~~~~~~~~----  232 (294)
T 2rku_A          169 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETY---------LRIKKNEY----  232 (294)
T ss_dssp             TC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH---------HHHHTTCC----
T ss_pred             cc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH---------HHHhhccC----
Confidence            22 223457899999999999889999999999999999999999999764421  110         01111211    


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                        .+..    .....+.+++.+||+.+|++||++.|+++.
T Consensus       233 --~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          233 --SIPK----HINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             --CCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             --CCcc----ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence              1111    223468899999999999999999999864


No 183
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=4.4e-42  Score=364.29  Aligned_cols=246  Identities=27%  Similarity=0.389  Sum_probs=198.9

Q ss_pred             ceecccCcEEEEEEEe---CCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEecCC
Q 014904           50 NLLGQGGFGYVHRGVL---PNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPN  124 (416)
Q Consensus        50 ~~LG~G~~g~Vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  124 (416)
                      +.||+|+||.||+|.+   ..++.||||+++....  ...+++.+|+.++.+++|||||+++++|.. ...++||||+.+
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            3799999999999974   3468899999986432  335789999999999999999999999965 558899999999


Q ss_pred             CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc--e
Q 014904          125 NTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH--V  202 (416)
Q Consensus       125 ~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~--~  202 (416)
                      ++|.+++....  .+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++........  .
T Consensus       454 g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  528 (635)
T 4fl3_A          454 GPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  528 (635)
T ss_dssp             EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred             CCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence            99999997543  589999999999999999999999   9999999999999999999999999999876543322  2


Q ss_pred             eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCcc
Q 014904          203 STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPK  281 (416)
Q Consensus       203 ~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~  281 (416)
                      .....+|+.|+|||++.+..++.++|||||||+||||++ |+.||......   .        +...+..+...      
T Consensus       529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~--------~~~~i~~~~~~------  591 (635)
T 4fl3_A          529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---E--------VTAMLEKGERM------  591 (635)
T ss_dssp             ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---H--------HHHHHHTTCCC------
T ss_pred             ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---H--------HHHHHHcCCCC------
Confidence            233457889999999999999999999999999999998 99999765431   1        11122222211      


Q ss_pred             ccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcc
Q 014904          282 LHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEG  321 (416)
Q Consensus       282 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~  321 (416)
                         ..+..++..+.+++..||+.+|++||++.+|++.|+.
T Consensus       592 ---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          592 ---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence               1222344678999999999999999999999999984


No 184
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=7.5e-41  Score=323.51  Aligned_cols=252  Identities=27%  Similarity=0.391  Sum_probs=201.5

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ...++|.+.+.||+|+||.||+|... +|+.||||++....  ....+.+|+.++.+++||||+++++++......++||
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            34578999999999999999999965 58999999998643  2357889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+++++|.+++.... ..+++..++.++.+++.||.|||+.   +|+|+||||+||+++.++.+||+|||++.......
T Consensus       104 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          104 EYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             ECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            9999999999986432 3689999999999999999999999   99999999999999999999999999998765432


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccC
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVD  279 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d  279 (416)
                      .. .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........  +        . .+..+....+..
T Consensus       180 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~--------~-~~~~~~~~~~~~  247 (314)
T 3com_A          180 AK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--I--------F-MIPTNPPPTFRK  247 (314)
T ss_dssp             SC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--H--------H-HHHHSCCCCCSS
T ss_pred             cc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--H--------H-HHhcCCCcccCC
Confidence            22 2345789999999999999999999999999999999999999976443110  0        0 011111111111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          280 PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       280 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                             +......+.+++.+||+.+|.+||++.++++
T Consensus       248 -------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          248 -------PELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -------cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                   1122357889999999999999999999986


No 185
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.3e-41  Score=334.81  Aligned_cols=253  Identities=22%  Similarity=0.342  Sum_probs=203.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||++......    +.+|++++.++ +||||+++++++.+....++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            4578999999999999999999964 6899999999865432    34678888887 7999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC----CceEEeecccceec
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK----FEAKVADFGLAKIA  195 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~----~~~kl~DFGla~~~  195 (416)
                      ||+++++|.+++....  .+++..+..++.+++.||.|||+.   +|+||||||+|||+..+    +.+||+|||+++..
T Consensus        96 E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           96 ELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             CCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            9999999999987654  589999999999999999999999   99999999999998543    34999999999876


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+.        ..+..+.+.
T Consensus       171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~--------~~i~~~~~~  241 (342)
T 2qr7_A          171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL--------ARIGSGKFS  241 (342)
T ss_dssp             BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH--------HHHHHCCCC
T ss_pred             cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH--------HHHccCCcc
Confidence            54332 233467899999999998888999999999999999999999999764322211111        122233322


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .      ...+.......+.+++.+||+.||++||++.||++.
T Consensus       242 ~------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          242 L------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             C------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             c------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            1      111112234578899999999999999999998853


No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=8.7e-41  Score=331.47  Aligned_cols=259  Identities=23%  Similarity=0.395  Sum_probs=209.2

Q ss_pred             CHHHHHHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc--------cHHHHHHHHHHHHhc-CCCcccc
Q 014904           35 TYEELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--------GEREFQAEVEIISRV-HHKHLVS  104 (416)
Q Consensus        35 ~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~  104 (416)
                      .++......++|.+.+.||+|+||.||+|.+. +|+.||||++......        ..+.+..|+.++.++ +||||++
T Consensus        85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~  164 (365)
T 2y7j_A           85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT  164 (365)
T ss_dssp             HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            44555667788999999999999999999975 7999999999765421        134578899999999 7999999


Q ss_pred             eEEEEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCce
Q 014904          105 LVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEA  184 (416)
Q Consensus       105 l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~  184 (416)
                      +++++......++||||+++++|.+++....  .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+
T Consensus       165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i  239 (365)
T 2y7j_A          165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI  239 (365)
T ss_dssp             EEEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred             EEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence            9999999999999999999999999987543  589999999999999999999999   99999999999999999999


Q ss_pred             EEeecccceeccCCCcceeecccccccccChhhhcc------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhh
Q 014904          185 KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASS------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLV  258 (416)
Q Consensus       185 kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~  258 (416)
                      ||+|||++........  .....||+.|+|||++.+      ..++.++|||||||++|+|++|+.||......   ...
T Consensus       240 kl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~  314 (365)
T 2y7j_A          240 RLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LML  314 (365)
T ss_dssp             EECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH
T ss_pred             EEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHH
Confidence            9999999987654322  234679999999999863      35889999999999999999999999764321   111


Q ss_pred             hhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          259 DWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                              ..+..+.+.. ..+.+ ..    ....+.+++.+||+.+|.+||++.|+++
T Consensus       315 --------~~i~~~~~~~-~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          315 --------RMIMEGQYQF-SSPEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             --------HHHHHTCCCC-CHHHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --------HHHHhCCCCC-CCccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                    1111222110 00000 11    2346889999999999999999999986


No 187
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.5e-41  Score=331.59  Aligned_cols=270  Identities=22%  Similarity=0.365  Sum_probs=200.3

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHH--HHhcCCCcccceEEEEEe-----CCeE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEI--ISRVHHKHLVSLVGYYTA-----GSQR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~  115 (416)
                      .++|.+.++||+|+||.||+|.. +++.||||++....   ...+..|.++  +..++|+||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            47899999999999999999987 78999999997532   3445555555  445899999999987653     2356


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeeeecccCCcEEECCCCceEEeec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC------HPKIIHRDIKAANILLDFKFEAKVADF  189 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~------~~~iiHrDIkp~NILl~~~~~~kl~DF  189 (416)
                      ++||||+++++|.+++...   .+++..++.|+.|++.||.|||+.+      .++|+||||||+||||+.++.+||+||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence            8999999999999999765   3589999999999999999999874      338999999999999999999999999


Q ss_pred             ccceeccCCCc-------ceeecccccccccChhhhcc-------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccch
Q 014904          190 GLAKIASDVNT-------HVSTRVMGTFGYLAPEYASS-------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVED  255 (416)
Q Consensus       190 Gla~~~~~~~~-------~~~~~~~gt~~YlaPE~~~~-------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~  255 (416)
                      |+++.......       .......||+.|+|||++.+       ..++.++|||||||++|||++|+.||.........
T Consensus       165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  244 (336)
T 3g2f_A          165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY  244 (336)
T ss_dssp             TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred             cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence            99987654221       11234579999999999976       35677999999999999999998876543321111


Q ss_pred             hhhhh----hh---HHhHHhhhcCCcccccCccccCc--CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          256 SLVDW----AR---PLLNRAIEDGNFDTLVDPKLHNE--YNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       256 ~l~~~----~~---~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ...-.    ..   ..+.........    .+.+...  ........+.+++.+||+.+|++||++.||++.|+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          245 QMAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            00000    00   000000111111    1111111  12346678999999999999999999999999998654


No 188
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2.3e-41  Score=322.68  Aligned_cols=246  Identities=28%  Similarity=0.404  Sum_probs=205.0

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|.+.+.||+|+||.||+|... +++.||||++....   ......+.+|+.++++++||||+++++++.+....++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            368999999999999999999964 67899999986432   22346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      +||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++......
T Consensus        93 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL  167 (284)
T ss_dssp             ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred             EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence            99999999999987654  589999999999999999999999   9999999999999999999999999998765432


Q ss_pred             CcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc
Q 014904          199 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV  278 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  278 (416)
                      .   .....|++.|+|||++.+..++.++||||||+++|+|++|+.||.......      ..     ..+.....    
T Consensus       168 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~-----~~~~~~~~----  229 (284)
T 2vgo_A          168 R---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------TH-----RRIVNVDL----  229 (284)
T ss_dssp             C---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HH-----HHHHTTCC----
T ss_pred             c---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HH-----HHHhcccc----
Confidence            2   234578999999999999999999999999999999999999997644211      00     11111111    


Q ss_pred             CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          279 DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       279 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        .+    +......+.+++.+||+.+|.+||++.||++
T Consensus       230 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          230 --KF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             --CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --CC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence              11    1222357889999999999999999999986


No 189
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.3e-42  Score=345.67  Aligned_cols=241  Identities=13%  Similarity=0.157  Sum_probs=190.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecC---CcccHHHHHHHH---HHHHhcCCCcccceE-------EE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAG---SGQGEREFQAEV---EIISRVHHKHLVSLV-------GY  108 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  108 (416)
                      .++|.+.+.||+|+||.||+|.+ .+|+.||||++...   .....+.+.+|+   .++++++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46788889999999999999995 57999999999743   233446788999   455556899999998       77


Q ss_pred             EEeCC-----------------eEEEEEEecCCCCHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 014904          109 YTAGS-----------------QRMLVYEFVPNNTLEFHLHGKGR-----PTMDWLTRLKIALGSAKGLAYLHEDCHPKI  166 (416)
Q Consensus       109 ~~~~~-----------------~~~lV~e~~~~~sL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~~LH~~~~~~i  166 (416)
                      +...+                 ..++||||+ +++|.+++.....     ..+++..++.|+.|++.||+|||+.   +|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            76553                 278999999 6899999875321     2344688899999999999999999   99


Q ss_pred             eeecccCCcEEECCCCceEEeecccceeccCCCcceeecccccccccChhhhccC-----------CCCchhhhHhHHHH
Q 014904          167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG-----------KLTEKSDVFSFGVM  235 (416)
Q Consensus       167 iHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~-----------~~t~ksDV~SlGvv  235 (416)
                      +||||||+||||+.++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||||||+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999986432    2344567 999999999887           89999999999999


Q ss_pred             HHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 014904          236 LLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQI  315 (416)
Q Consensus       236 L~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~ev  315 (416)
                      +|||++|+.||........                   ...+...  ...    ....+.+++.+||+.+|++||++.|+
T Consensus       303 l~elltg~~Pf~~~~~~~~-------------------~~~~~~~--~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~  357 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGG-------------------SEWIFRS--CKN----IPQPVRALLEGFLRYPKEDRLLPLQA  357 (377)
T ss_dssp             HHHHHHSSCCC------CC-------------------SGGGGSS--CCC----CCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred             HHHHHHCCCCCcccccccc-------------------hhhhhhh--ccC----CCHHHHHHHHHHcCCCchhCCCHHHH
Confidence            9999999999975432110                   0000000  011    23578899999999999999999999


Q ss_pred             HH
Q 014904          316 VR  317 (416)
Q Consensus       316 v~  317 (416)
                      ++
T Consensus       358 l~  359 (377)
T 3byv_A          358 ME  359 (377)
T ss_dssp             HT
T ss_pred             hh
Confidence            85


No 190
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=4.8e-41  Score=342.84  Aligned_cols=195  Identities=26%  Similarity=0.368  Sum_probs=155.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeC-----C
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAG-----S  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  113 (416)
                      ..++|.+.++||+|+||.||+|.+. +++.||||++.....  ...+.+.+|+.++++++||||+++++++...     .
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            4578999999999999999999954 789999999975432  2345788999999999999999999999543     5


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..++||||+ +++|..++....  .+++..+..++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          131 ELYVVLEIA-DSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             CEEEEECCC-SEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             eEEEEEecc-ccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence            689999998 578888886543  599999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCCc--------------------------ceeecccccccccChhhh-ccCCCCchhhhHhHHHHHHHHHhC
Q 014904          194 IASDVNT--------------------------HVSTRVMGTFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITG  242 (416)
Q Consensus       194 ~~~~~~~--------------------------~~~~~~~gt~~YlaPE~~-~~~~~t~ksDV~SlGvvL~elltG  242 (416)
                      .......                          ...+..+||+.|+|||++ ....++.++|||||||+||||++|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            7643211                          122446789999999986 456799999999999999999993


No 191
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.5e-41  Score=335.33  Aligned_cols=261  Identities=22%  Similarity=0.324  Sum_probs=204.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      .++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++.+++||||+++++++.+....++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            357999999999999999999964 689999999986532 334578999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCc
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNT  200 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~  200 (416)
                      |+++++|.+++....  .+++..+..|+.+++.||.|||+.+  +|+||||||+|||++.++.+||+|||++......  
T Consensus       112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  185 (360)
T ss_dssp             CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence            999999999997654  5899999999999999999999843  7999999999999999999999999998755322  


Q ss_pred             ceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh-------------------
Q 014904          201 HVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA-------------------  261 (416)
Q Consensus       201 ~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~-------------------  261 (416)
                       ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...............                   
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             223457899999999999999999999999999999999999999764431111000000                   


Q ss_pred             ------------hHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          262 ------------RPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       262 ------------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                                  .......+..+...        ..........+.+++.+||+.+|.+||++.|+++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPPP--------KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCCC--------CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cccccCCCCcccchhhhhHHhccCCC--------CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                        00000000011100        00111123578999999999999999999999853


No 192
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-41  Score=331.94  Aligned_cols=271  Identities=24%  Similarity=0.311  Sum_probs=198.2

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc-----HHHHHHHHHHHHhcCCCcccceEEEEEe
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG-----EREFQAEVEIISRVHHKHLVSLVGYYTA  111 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~  111 (416)
                      ++....++|.+.++||+|+||.||+|... +|+.||||++.......     .+.+.+|+.++.+++||||+++++++.+
T Consensus         4 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (346)
T 1ua2_A            4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH   83 (346)
T ss_dssp             ---------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             hhHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee
Confidence            34556789999999999999999999964 68999999997543221     1367899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccc
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGL  191 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGl  191 (416)
                      ....++||||+.+ +|..++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        84 ~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A           84 KSNISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             TTCCEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             CCceEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccc
Confidence            9999999999976 7888876543 3588889999999999999999999   999999999999999999999999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      ++....... ......||+.|+|||++.+. .++.++|||||||++|||++|..||......  +.+.........  ..
T Consensus       159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--~~~~~i~~~~~~--~~  233 (346)
T 1ua2_A          159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--DQLTRIFETLGT--PT  233 (346)
T ss_dssp             GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCC--CC
T ss_pred             ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHcCC--CC
Confidence            987654332 22345789999999999764 5899999999999999999999998765431  111111100000  00


Q ss_pred             cCCc---ccccCc---cccCcCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          271 DGNF---DTLVDP---KLHNEYN-----HNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       271 ~~~~---~~~~d~---~l~~~~~-----~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...+   ..+.+.   ......+     ......+.+++.+||+.+|.+||++.|+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          234 EEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             TTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            0000   000000   0000001     1233678999999999999999999999875


No 193
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=3.4e-41  Score=319.74  Aligned_cols=249  Identities=25%  Similarity=0.386  Sum_probs=198.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||++....   ......+.+|+.+++.++||||+++++++......++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            3478999999999999999999965 79999999997532   2334578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      |+||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||++.....
T Consensus        89 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             EEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             EEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            999999999999997543  589999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ...  .....||+.|+|||.+.+..+ +.++||||||+++++|++|+.||.....   ..+        ...+..+... 
T Consensus       164 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~--------~~~~~~~~~~-  229 (276)
T 2h6d_A          164 GEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV---PTL--------FKKIRGGVFY-  229 (276)
T ss_dssp             ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH--------HHHHHHCCCC-
T ss_pred             Ccc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHH--------HHHhhcCccc-
Confidence            322  234568999999999987765 6899999999999999999999976432   111        1111222110 


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                           +..    .....+.+++.+||+.+|.+||++.||++.
T Consensus       230 -----~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          230 -----IPE----YLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             -----CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -----Cch----hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                 111    123468899999999999999999999974


No 194
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.3e-41  Score=325.41  Aligned_cols=246  Identities=24%  Similarity=0.386  Sum_probs=197.6

Q ss_pred             CCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEe----CCeEEE
Q 014904           45 GFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTA----GSQRML  117 (416)
Q Consensus        45 ~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  117 (416)
                      .|.+.+.||+|+||.||+|.. .++..||+|++....  ......+.+|+.++++++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            367777899999999999995 468899999987543  2334578899999999999999999999876    456899


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeeecccCCcEEEC-CCCceEEeeccccee
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK--IIHRDIKAANILLD-FKFEAKVADFGLAKI  194 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--iiHrDIkp~NILl~-~~~~~kl~DFGla~~  194 (416)
                      ||||+++++|.+++....  .+++..++.|+.+++.||.|||+.   +  |+||||||+|||++ .++.+||+|||++..
T Consensus       107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            999999999999997543  589999999999999999999998   7  99999999999997 789999999999975


Q ss_pred             ccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          195 ASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       195 ~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ....   ......||+.|+|||++. +.++.++||||||+++|+|++|+.||......  ..+.        ..+..+..
T Consensus       182 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~--------~~~~~~~~  247 (290)
T 1t4h_A          182 KRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIY--------RRVTSGVK  247 (290)
T ss_dssp             CCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHH--------HHHTTTCC
T ss_pred             cccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--HHHH--------HHHhccCC
Confidence            4432   223457999999999886 56999999999999999999999999764331  1111        11111211


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ..    ....    .....+.+++.+||+.+|.+||++.||++
T Consensus       248 ~~----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          248 PA----SFDK----VAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CG----GGGG----CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cc----ccCC----CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            11    1111    12246899999999999999999999986


No 195
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.6e-41  Score=348.12  Aligned_cols=254  Identities=25%  Similarity=0.351  Sum_probs=204.3

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc-------------ccHHHHHHHHHHHHhcCCCcccce
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG-------------QGEREFQAEVEIISRVHHKHLVSL  105 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l  105 (416)
                      ....++|.+.++||+|+||.||+|... +++.||||++.....             ...+.+.+|+.++++++||||+++
T Consensus        32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            346789999999999999999999964 688999999975432             224578899999999999999999


Q ss_pred             EEEEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC---
Q 014904          106 VGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF---  182 (416)
Q Consensus       106 ~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~---  182 (416)
                      ++++.+....++||||+++++|.+++....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.++   
T Consensus       112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          112 FDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred             EEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence            999999999999999999999998886543  599999999999999999999999   999999999999998776   


Q ss_pred             ceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhh
Q 014904          183 EAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWAR  262 (416)
Q Consensus       183 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~  262 (416)
                      .+||+|||+++.......  .....||+.|+|||++. +.++.++|||||||++|+|++|+.||......   .      
T Consensus       187 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~------  254 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---D------  254 (504)
T ss_dssp             SEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---H------
T ss_pred             cEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---H------
Confidence            699999999987654322  23457999999999987 57999999999999999999999999865431   1      


Q ss_pred             HHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          263 PLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       263 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                        +...+..+.+..  +.....    .....+.+++.+||+.+|.+||++.|+++.
T Consensus       255 --~~~~i~~~~~~~--~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          255 --IIKKVEKGKYYF--DFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             --HHHHHHHCCCCC--CHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --HHHHHHcCCCCC--CccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence              111222232211  000001    123578899999999999999999999853


No 196
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=3e-41  Score=345.44  Aligned_cols=265  Identities=22%  Similarity=0.290  Sum_probs=196.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecC--CcccHHHHHHHHHHHHhcCCCcccceEEEEEeC------
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAG--SGQGEREFQAEVEIISRVHHKHLVSLVGYYTAG------  112 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  112 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            467899999999999999999995 46899999999754  223345788999999999999999999999654      


Q ss_pred             CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccc
Q 014904          113 SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA  192 (416)
Q Consensus       113 ~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla  192 (416)
                      ...++||||+.++ |...+..    .+++..+..++.|++.||+|||+.   +|+||||||+||||+.++.+||+|||++
T Consensus       140 ~~~~lv~E~~~~~-l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          140 QDVYLVMELMDAN-LCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             CEEEEEEECCSEE-HHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             CeEEEEEeCCCCC-HHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEee
Confidence            4579999999765 5555543    389999999999999999999999   9999999999999999999999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhh----------
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWAR----------  262 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~----------  262 (416)
                      +.....  ...+...||+.|+|||++.+..++.++|||||||+|+||++|+.||........  +.....          
T Consensus       212 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~--~~~i~~~lg~p~~~~~  287 (464)
T 3ttj_A          212 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCPEFM  287 (464)
T ss_dssp             -----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHH
T ss_pred             eecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHH
Confidence            876542  223456899999999999999999999999999999999999999987543111  111000          


Q ss_pred             ----HHhHHhhhcC-Cccc-----ccCcccc---CcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          263 ----PLLNRAIEDG-NFDT-----LVDPKLH---NEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       263 ----~~~~~~~~~~-~~~~-----~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                          +.....++.. ....     +....+.   ..........+.+|+.+||+.||.+||++.|+++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                0000111100 0000     0000000   00111225678999999999999999999999864


No 197
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.3e-41  Score=343.57  Aligned_cols=254  Identities=25%  Similarity=0.380  Sum_probs=194.8

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc--------ccHHHHHHHHHHHHhcCCCcccceEEEEE
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG--------QGEREFQAEVEIISRVHHKHLVSLVGYYT  110 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~  110 (416)
                      ....++|.+.+.||+|+||.||+|.. .+++.||||++.....        .....+.+|+.++++++||||+++++++.
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            34678999999999999999999995 4689999999875321        11224789999999999999999999985


Q ss_pred             eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCC---ceEEe
Q 014904          111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKF---EAKVA  187 (416)
Q Consensus       111 ~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~---~~kl~  187 (416)
                      . ...++||||+++++|.+++....  .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++   .+||+
T Consensus       211 ~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 A-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             S-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             c-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence            4 56899999999999998886543  599999999999999999999999   999999999999997544   59999


Q ss_pred             ecccceeccCCCcceeecccccccccChhhhcc---CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH
Q 014904          188 DFGLAKIASDVNTHVSTRVMGTFGYLAPEYASS---GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL  264 (416)
Q Consensus       188 DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~---~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~  264 (416)
                      |||+++.....  .......||+.|+|||++.+   ..++.++|||||||++|+|++|+.||.......  .+.      
T Consensus       285 DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~------  354 (419)
T 3i6u_A          285 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLK------  354 (419)
T ss_dssp             CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHH------
T ss_pred             ecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHH------
Confidence            99999876542  22344679999999999853   678899999999999999999999997643311  111      


Q ss_pred             hHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          265 LNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       265 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        ..+..+.+...  +....    .....+.+++.+||+.+|.+||++.|+++
T Consensus       355 --~~i~~~~~~~~--~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          355 --DQITSGKYNFI--PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             --HHHHTTCCCCC--HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --HHHhcCCCCCC--chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence              11122222111  11111    12357889999999999999999999986


No 198
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.2e-41  Score=343.06  Aligned_cols=201  Identities=22%  Similarity=0.310  Sum_probs=175.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhc------CCCcccceEEEEEeCCe
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRV------HHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~  114 (416)
                      ...+|.+.++||+|+||.||+|... +++.||||+++... .....+..|+.++..+      +|+||+++++++.....
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            4568999999999999999999854 58999999997532 2335677888888887      57799999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc--eEEeecccc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE--AKVADFGLA  192 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~--~kl~DFGla  192 (416)
                      .++||||+. ++|.+++.......+++..++.|+.|++.||+|||+.   +|+||||||+||||+.++.  +||+|||++
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence            999999996 6888888776655799999999999999999999999   9999999999999999987  999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCc
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHT  251 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~  251 (416)
                      +.....    .....||+.|+|||++.+..++.++|||||||+||||++|+.||.....
T Consensus       250 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          250 CYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             EETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             eecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            765432    2335789999999999999999999999999999999999999977543


No 199
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=2.8e-42  Score=329.41  Aligned_cols=257  Identities=26%  Similarity=0.394  Sum_probs=197.9

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC--CCc--EEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP--NGK--EVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~--~g~--~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      .++|.+.+.||+|+||.||+|.+.  +++  .||||+++...   ......+.+|+.++.+++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            368999999999999999999853  333  68999987542   233467889999999999999999999998765 8


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      ++|+||+++++|.+++.... ..+++..++.++.+++.||.|||+.   +|+||||||+||+++.++.+||+|||++...
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence            89999999999999987543 2589999999999999999999999   9999999999999999999999999999877


Q ss_pred             cCCCcce--eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcC
Q 014904          196 SDVNTHV--STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDG  272 (416)
Q Consensus       196 ~~~~~~~--~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~  272 (416)
                      .......  .....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.....   ..+..       . +...
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~-------~-~~~~  240 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---SQILH-------K-IDKE  240 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHH-------H-HHTS
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH---HHHHH-------H-HHcc
Confidence            5543322  233567889999999998889999999999999999999 9999976542   11111       1 1111


Q ss_pred             CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          273 NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       273 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ...    .    ..+......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       241 ~~~----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          241 GER----L----PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CCC----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCC----C----CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            110    0    111223457899999999999999999999999998643


No 200
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.3e-42  Score=334.95  Aligned_cols=264  Identities=22%  Similarity=0.340  Sum_probs=194.6

Q ss_pred             CCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccH-HHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEEEe
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGE-REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ++|.+.+.||+|+||.||+|... +++.||||++........ ..+.+|+.++++++||||+++++++......++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999965 789999999975432221 2455799999999999999999999999999999999


Q ss_pred             cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcc
Q 014904          122 VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTH  201 (416)
Q Consensus       122 ~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~  201 (416)
                      +. ++|.+++..... .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus        82 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-  155 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-  155 (324)
T ss_dssp             CS-EEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred             cc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-
Confidence            97 588888765543 689999999999999999999999   999999999999999999999999999986543322 


Q ss_pred             eeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccccc--
Q 014904          202 VSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLV--  278 (416)
Q Consensus       202 ~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--  278 (416)
                      ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......  .+. .....+.. .....+....  
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~-~i~~~~~~-~~~~~~~~~~~~  231 (324)
T 3mtl_A          156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLH-FIFRILGT-PTEETWPGILSN  231 (324)
T ss_dssp             -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHH-HHHHHHCC-CCTTTSTTGGGC
T ss_pred             ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHH-HHHHHhCC-CChHhchhhhcc
Confidence            2234568999999999876 568999999999999999999999998754321  111 11000000 0000000000  


Q ss_pred             -------CccccCc----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          279 -------DPKLHNE----YNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       279 -------d~~l~~~----~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                             .+.....    ........+.+++.+||+.||.+||++.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                   0000000    00112356789999999999999999999986


No 201
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=6.1e-42  Score=335.88  Aligned_cols=258  Identities=21%  Similarity=0.303  Sum_probs=207.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCccc-----------------HHHHHHHHHHHHhcCCCcccce
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQG-----------------EREFQAEVEIISRVHHKHLVSL  105 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l  105 (416)
                      .++|.+.+.||+|+||.||+|.. +++.||||++.......                 ...+.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            57899999999999999999999 99999999997432111                 1688999999999999999999


Q ss_pred             EEEEEeCCeEEEEEEecCCCCHHHH------hhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeeecccCCcEEE
Q 014904          106 VGYYTAGSQRMLVYEFVPNNTLEFH------LHGKGRPTMDWLTRLKIALGSAKGLAYLHE-DCHPKIIHRDIKAANILL  178 (416)
Q Consensus       106 ~~~~~~~~~~~lV~e~~~~~sL~~~------l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~iiHrDIkp~NILl  178 (416)
                      ++++.+....++||||+++++|.++      +.......+++..++.++.|++.||.|||+ .   +|+||||||+||++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~  185 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM  185 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence            9999999999999999999999998      655445679999999999999999999999 7   99999999999999


Q ss_pred             CCCCceEEeecccceeccCCCcceeecccccccccChhhhccC-CCCc-hhhhHhHHHHHHHHHhCCCCCCCCCcccchh
Q 014904          179 DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG-KLTE-KSDVFSFGVMLLELITGRRPVDSTHTFVEDS  256 (416)
Q Consensus       179 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~-ksDV~SlGvvL~elltG~~pf~~~~~~~~~~  256 (416)
                      +.++.+||+|||++......   ......||..|+|||.+.+. .++. ++||||||+++|||++|+.||......  ..
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~  260 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VE  260 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HH
T ss_pred             cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HH
Confidence            99999999999999876443   33446799999999999877 6666 999999999999999999999865431  11


Q ss_pred             hhhhhhHHhHHhhhcCCcccccC------ccc---cCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          257 LVDWARPLLNRAIEDGNFDTLVD------PKL---HNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       257 l~~~~~~~~~~~~~~~~~~~~~d------~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      +..        .+..+......+      +..   ...........+.+++.+||+.+|.+||++.|+++
T Consensus       261 ~~~--------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          261 LFN--------NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHH--------HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHH--------HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111        111221110000      000   00011223457899999999999999999999986


No 202
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=6.2e-41  Score=326.11  Aligned_cols=268  Identities=19%  Similarity=0.306  Sum_probs=206.4

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe--CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCC------cccceEEEEEeCC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL--PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHK------HLVSLVGYYTAGS  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~  113 (416)
                      ..++|.+.+.||+|+||.||+|..  .+++.||||+++... .....+.+|+.++..++|+      +++++++++....
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            347899999999999999999986  368899999997532 3345788899999998765      4999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC-------------
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF-------------  180 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~-------------  180 (416)
                      ..++||||+ +++|.+++.......+++..++.++.|++.||+|||+.   +|+||||||+|||++.             
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence            999999999 88999999877656789999999999999999999999   9999999999999987             


Q ss_pred             ------CCceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccc
Q 014904          181 ------KFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE  254 (416)
Q Consensus       181 ------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~  254 (416)
                            ++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  242 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH  242 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred             ccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                  6689999999998754322    335789999999999999999999999999999999999999986543211


Q ss_pred             hhhhhhh-hH---HhHHhhhcCCc--------c----------cccCcc-ccCcCCHHHHHHHHHHHHHhhccCCCCCCC
Q 014904          255 DSLVDWA-RP---LLNRAIEDGNF--------D----------TLVDPK-LHNEYNHNEMARMVACAAACVRHSARRRPR  311 (416)
Q Consensus       255 ~~l~~~~-~~---~~~~~~~~~~~--------~----------~~~d~~-l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt  311 (416)
                      ....... .+   .+........+        .          ....+. -...........+.+++.+||+.||.+||+
T Consensus       243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  322 (339)
T 1z57_A          243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT  322 (339)
T ss_dssp             HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence            1111000 00   00000000000        0          000000 001123355678999999999999999999


Q ss_pred             HHHHHHH
Q 014904          312 MSQIVRA  318 (416)
Q Consensus       312 ~~evv~~  318 (416)
                      +.||++.
T Consensus       323 ~~ell~h  329 (339)
T 1z57_A          323 LREALKH  329 (339)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhcC
Confidence            9999853


No 203
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=6.9e-42  Score=326.56  Aligned_cols=253  Identities=25%  Similarity=0.361  Sum_probs=187.4

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc-H-HHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG-E-REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|++.+.||+|+||.||+|.. .+|+.||||+++...... . +.+.++...++.++||||+++++++.+....++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            357899999999999999999995 578999999997653222 2 2344555568888999999999999999999999


Q ss_pred             EEecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          119 YEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      |||+++ +|.+++..  .....+++..++.|+.|++.||.|||+.+  +|+||||||+||+++.++.+||+|||+++...
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            999974 77766643  12346999999999999999999999864  89999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccChhhh----ccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcC
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYA----SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDG  272 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~----~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~  272 (416)
                      ....  .....||+.|+|||++    .+..++.++||||||+++|+|++|+.||..... ....+        .......
T Consensus       162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~--------~~~~~~~  230 (290)
T 3fme_A          162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-PFQQL--------KQVVEEP  230 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-HHHHH--------HHHHHSC
T ss_pred             cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-hHHHH--------HHHhccC
Confidence            4322  2334689999999996    566789999999999999999999999975332 11111        1111111


Q ss_pred             CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          273 NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       273 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      . ....        .......+.+++.+||+.+|++||++.||++
T Consensus       231 ~-~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          231 S-PQLP--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             C-CCCC--------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             C-CCcc--------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            1 1111        1122357899999999999999999999986


No 204
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=8.5e-41  Score=343.39  Aligned_cols=261  Identities=20%  Similarity=0.271  Sum_probs=209.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCC-CcccceEEEEEeCCeEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHH-KHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~  119 (416)
                      ..++|.+.++||+|+||.||+|.+ .+++.||||++......  .++..|+.++..++| +++..+..++......+|||
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            357899999999999999999995 57899999998755432  357889999999976 66667777778889999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeecccceecc
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~~~  196 (416)
                      ||+ +++|.+++..... .+++..++.|+.|++.||.|||+.   +||||||||+||||   +.++.+||+|||+++...
T Consensus        83 e~~-g~sL~~ll~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             ECC-CCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            999 9999999975433 699999999999999999999999   99999999999999   688999999999998776


Q ss_pred             CCCcce------eecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh
Q 014904          197 DVNTHV------STRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE  270 (416)
Q Consensus       197 ~~~~~~------~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~  270 (416)
                      ......      .....||+.|+|||++.+..++.++|||||||+||||++|+.||..................   .+ 
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~---~~-  233 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK---KV-  233 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH---HH-
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc---cc-
Confidence            543321      22567999999999999999999999999999999999999999875543222222211110   00 


Q ss_pred             cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          271 DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       271 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                      ......     +...    .+..+.+++..||+.+|++||++.+|++.|+..
T Consensus       234 ~~~~~~-----l~~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          234 ATSIEA-----LCRG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HSCHHH-----HHTT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             cccHHH-----HhcC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            000000     1111    235789999999999999999999999998753


No 205
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=8.1e-41  Score=320.81  Aligned_cols=268  Identities=20%  Similarity=0.299  Sum_probs=202.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      .++|.+.+.||+|+||.||+|... +|+.||||++......  ....+.+|+.++++++||||+++++++......++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   81 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence            368999999999999999999965 7899999998754322  2357889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||+. ++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  157 (299)
T 2r3i_A           82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  157 (299)
T ss_dssp             ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence            9997 6899998776555789999999999999999999999   99999999999999999999999999997654322


Q ss_pred             cceeecccccccccChhhhccCC-CCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhH-------Hhhhc
Q 014904          200 THVSTRVMGTFGYLAPEYASSGK-LTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLN-------RAIED  271 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~-~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~-------~~~~~  271 (416)
                      . ......||+.|+|||.+.+.. ++.++||||||+++|+|++|+.||......  +.+.......-.       .....
T Consensus       158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  234 (299)
T 2r3i_A          158 R-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTSM  234 (299)
T ss_dssp             B-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             c-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCchhhhhHhhcC
Confidence            2 123356899999999998765 799999999999999999999999865431  111111110000       00000


Q ss_pred             CCcccccCccccCc---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          272 GNFDTLVDPKLHNE---YNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       272 ~~~~~~~d~~l~~~---~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ..+...........   ........+.+++.+||+.||++||++.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00000000000000   00112357889999999999999999999986


No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=3.2e-41  Score=346.49  Aligned_cols=252  Identities=23%  Similarity=0.373  Sum_probs=207.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.++||+|+||.||+|... +|+.||||++....   ......+.+|+.++++++||||+++++++.+....++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            3568999999999999999999965 78999999997543   3345789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---CCCCceEEeeccccee
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---DFKFEAKVADFGLAKI  194 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---~~~~~~kl~DFGla~~  194 (416)
                      |+||+.+++|.+.+....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||+   +.++.+||+|||+++.
T Consensus       104 v~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             EECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            999999999999887654  589999999999999999999999   99999999999999   5678899999999987


Q ss_pred             ccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCc
Q 014904          195 ASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNF  274 (416)
Q Consensus       195 ~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~  274 (416)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||......   .+        ...+..+.+
T Consensus       179 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~--------~~~i~~~~~  244 (484)
T 3nyv_A          179 FEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DI--------LKKVEKGKY  244 (484)
T ss_dssp             BCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH--------HHHHHHCCC
T ss_pred             cccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HH--------HHHHHcCCC
Confidence            654322  234579999999999875 7999999999999999999999999865431   11        112223322


Q ss_pred             ccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          275 DTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       275 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ..- .+.     .......+.+++.+||+.+|.+||++.|+++.
T Consensus       245 ~~~-~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          245 TFE-LPQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             CCC-SGG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCC-Ccc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            110 011     11233578899999999999999999999853


No 207
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=4.6e-42  Score=332.33  Aligned_cols=261  Identities=22%  Similarity=0.345  Sum_probs=201.0

Q ss_pred             ccCHHHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcC--CCcccceEEE
Q 014904           33 TFTYEELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVH--HKHLVSLVGY  108 (416)
Q Consensus        33 ~f~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~  108 (416)
                      .+.+..+....++|.+.+.||+|+||.||++...+++.||||++.....  .....+.+|+.++.+++  |+||++++++
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            3444455556788999999999999999999988899999999975432  23467899999999997  5999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEee
Q 014904          109 YTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVAD  188 (416)
Q Consensus       109 ~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~D  188 (416)
                      +......++||| +.+++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||+++ +.+||+|
T Consensus        97 ~~~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~D  169 (313)
T 3cek_A           97 EITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLID  169 (313)
T ss_dssp             EECSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECC
T ss_pred             eecCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEee
Confidence            999999999999 56889999997654  589999999999999999999999   9999999999999964 7999999


Q ss_pred             cccceeccCCCcc-eeecccccccccChhhhcc-----------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchh
Q 014904          189 FGLAKIASDVNTH-VSTRVMGTFGYLAPEYASS-----------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDS  256 (416)
Q Consensus       189 FGla~~~~~~~~~-~~~~~~gt~~YlaPE~~~~-----------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~  256 (416)
                      ||+++........ ......||+.|+|||++.+           ..++.++||||||+++|+|++|+.||......    
T Consensus       170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----  245 (313)
T 3cek_A          170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----  245 (313)
T ss_dssp             CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----
T ss_pred             ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH----
Confidence            9999876543322 2234578999999999875           47889999999999999999999999754321    


Q ss_pred             hhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          257 LVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       257 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...     +....         ++.....++......+.+++.+||+.+|.+||++.||++.
T Consensus       246 ~~~-----~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          246 ISK-----LHAII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HHH-----HHHHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHH-----HHHHH---------hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            000     11111         1111111111223578899999999999999999999864


No 208
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.4e-41  Score=336.14  Aligned_cols=267  Identities=22%  Similarity=0.303  Sum_probs=198.5

Q ss_pred             HHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe------
Q 014904           39 LARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA------  111 (416)
Q Consensus        39 l~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------  111 (416)
                      +....++|.+.+.||+|+||.||+|.. .+|+.||||++.....    ...+|+.+++.++||||+++++++..      
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            445678999999999999999999995 5799999999875432    23469999999999999999999854      


Q ss_pred             --------------------------------CCeEEEEEEecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHH
Q 014904          112 --------------------------------GSQRMLVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAY  157 (416)
Q Consensus       112 --------------------------------~~~~~lV~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~  157 (416)
                                                      ....++||||+++ +|...+..  .....+++..+..++.|++.||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                            3348899999984 77666643  223469999999999999999999


Q ss_pred             HHhcCCCCeeeecccCCcEEEC-CCCceEEeecccceeccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHH
Q 014904          158 LHEDCHPKIIHRDIKAANILLD-FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVM  235 (416)
Q Consensus       158 LH~~~~~~iiHrDIkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvv  235 (416)
                      ||+.   +|+||||||+|||++ .++.+||+|||+++........  ....||+.|+|||++.+. .++.++|||||||+
T Consensus       157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS--VAYICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC--CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC--cCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            9999   999999999999997 6889999999999876543332  345689999999998765 48999999999999


Q ss_pred             HHHHHhCCCCCCCCCcccchhhhhhhhHH----hHHhh-hcCCccc-----ccCccccCcCCHHHHHHHHHHHHHhhccC
Q 014904          236 LLELITGRRPVDSTHTFVEDSLVDWARPL----LNRAI-EDGNFDT-----LVDPKLHNEYNHNEMARMVACAAACVRHS  305 (416)
Q Consensus       236 L~elltG~~pf~~~~~~~~~~l~~~~~~~----~~~~~-~~~~~~~-----~~d~~l~~~~~~~~~~~l~~l~~~cl~~~  305 (416)
                      +|||++|+.||......  +.+.......    ..... ....+..     +....+...++......+.+++.+||+.+
T Consensus       232 l~ell~g~~pf~~~~~~--~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          232 FGELILGKPLFSGETSI--DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            99999999999875431  2222211100    00000 0111111     11111111223334457899999999999


Q ss_pred             CCCCCCHHHHHH
Q 014904          306 ARRRPRMSQIVR  317 (416)
Q Consensus       306 p~~RPt~~evv~  317 (416)
                      |.+||++.|+++
T Consensus       310 P~~R~t~~e~l~  321 (383)
T 3eb0_A          310 PDLRINPYEAMA  321 (383)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhhCCCHHHHhc
Confidence            999999999984


No 209
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=5.3e-41  Score=346.01  Aligned_cols=251  Identities=25%  Similarity=0.391  Sum_probs=200.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|.+.+.||+|+||.||+|... ++..||||++....  ......+.+|+.+++.++||||+++++++.+....++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            4567999999999999999999964 68999999997643  23346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC---CceEEeecccceec
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK---FEAKVADFGLAKIA  195 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~---~~~kl~DFGla~~~  195 (416)
                      |||+++++|.+.+....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||++.+   +.+||+|||+++..
T Consensus       115 ~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          115 MECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            99999999988886543  589999999999999999999999   99999999999999764   45999999999877


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      .....  .....||+.|+|||++. +.++.++|||||||++|+|++|+.||......   .+        ...+..+.+.
T Consensus       190 ~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~--------~~~i~~~~~~  255 (494)
T 3lij_A          190 ENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EI--------LRKVEKGKYT  255 (494)
T ss_dssp             BTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH--------HHHHHHTCCC
T ss_pred             CCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HH--------HHHHHhCCCC
Confidence            54322  23467999999999986 57999999999999999999999999765431   11        1112222221


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       +..+.+ .    .....+.+++.+||+.+|.+||++.|+++
T Consensus       256 -~~~~~~-~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          256 -FDSPEW-K----NVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             -CCSGGG-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -CCchhc-c----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence             111111 1    12356889999999999999999999985


No 210
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=9.6e-41  Score=328.41  Aligned_cols=267  Identities=21%  Similarity=0.266  Sum_probs=199.9

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEe--------
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTA--------  111 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------  111 (416)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||++......  ....+.+|+.++.+++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            47899999999999999999996 57899999998654322  23578899999999999999999999987        


Q ss_pred             CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccc
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGL  191 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGl  191 (416)
                      ....++||||+.+ +|...+..... .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CceEEEEEeccCC-CHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence            4568999999975 66666654332 599999999999999999999999   999999999999999999999999999


Q ss_pred             ceeccCCCc---ceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHH
Q 014904          192 AKIASDVNT---HVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNR  267 (416)
Q Consensus       192 a~~~~~~~~---~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~  267 (416)
                      ++.......   .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+.   .... 
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~-  246 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS---QLCG-  246 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---HHHC-
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---HHhC-
Confidence            987653222   22244678999999999876 458999999999999999999999998754321111110   0000 


Q ss_pred             hhhcCCccccc--------CccccCcCC-HHH------HHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          268 AIEDGNFDTLV--------DPKLHNEYN-HNE------MARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       268 ~~~~~~~~~~~--------d~~l~~~~~-~~~------~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ......+....        ......... ...      ...+.+++.+||+.||.+||++.|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00000000000        000000000 011      2457899999999999999999999863


No 211
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1e-40  Score=343.16  Aligned_cols=252  Identities=23%  Similarity=0.356  Sum_probs=204.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|.+.++||+|+||.||+|... +++.||||++....  ......+.+|+.++++++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            4578999999999999999999964 78999999986432  23456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC---CCCceEEeecccceec
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD---FKFEAKVADFGLAKIA  195 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~---~~~~~kl~DFGla~~~  195 (416)
                      +||+.+++|.+.+....  .+++..++.|+.|++.||.|||+.   +|+||||||+|||++   .++.+||+|||+++..
T Consensus       100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  174 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF  174 (486)
T ss_dssp             ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred             EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence            99999999998886543  589999999999999999999999   999999999999995   4567999999999866


Q ss_pred             cCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          196 SDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       196 ~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ....  ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||......   .+        ...+..+.+.
T Consensus       175 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~--------~~~i~~~~~~  240 (486)
T 3mwu_A          175 QQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DI--------LKRVETGKYA  240 (486)
T ss_dssp             CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH--------HHHHHHTCCC
T ss_pred             CCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HH--------HHHHHhCCCC
Confidence            4432  2234579999999999875 6999999999999999999999999765431   11        1112223221


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .- .+.     .......+.+++.+||+.+|.+||++.|+++.
T Consensus       241 ~~-~~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          241 FD-LPQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             SC-SGG-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CC-Ccc-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            10 011     11223578899999999999999999999874


No 212
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.1e-40  Score=319.68  Aligned_cols=253  Identities=25%  Similarity=0.338  Sum_probs=205.5

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc---------ccHHHHHHHHHHHHhcC-CCcccceEEEE
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG---------QGEREFQAEVEIISRVH-HKHLVSLVGYY  109 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~  109 (416)
                      ...++|.+.+.||+|+||.||+|... +|+.||||++.....         ...+.+.+|+.++.++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            35689999999999999999999964 689999999976431         11346789999999995 99999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeec
Q 014904          110 TAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADF  189 (416)
Q Consensus       110 ~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DF  189 (416)
                      ......++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+|+||||+||+++.++.+||+||
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df  168 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF  168 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence            99999999999999999999997543  589999999999999999999999   9999999999999999999999999


Q ss_pred             ccceeccCCCcceeecccccccccChhhhc------cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH
Q 014904          190 GLAKIASDVNTHVSTRVMGTFGYLAPEYAS------SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP  263 (416)
Q Consensus       190 Gla~~~~~~~~~~~~~~~gt~~YlaPE~~~------~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~  263 (416)
                      |++........  .....|++.|+|||++.      ...++.++||||||+++++|++|+.||......   ..      
T Consensus       169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~------  237 (298)
T 1phk_A          169 GFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LM------  237 (298)
T ss_dssp             TTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH------
T ss_pred             cchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HH------
Confidence            99987654322  23457899999999985      456899999999999999999999999764321   11      


Q ss_pred             HhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          264 LLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       264 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        ...+..+.... ..+     ........+.+++.+||+.+|.+||++.|+++
T Consensus       238 --~~~~~~~~~~~-~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          238 --LRMIMSGNYQF-GSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             --HHHHHHTCCCC-CTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --HHHHhcCCccc-Ccc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence              11112222211 111     11123457899999999999999999999985


No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=8.5e-42  Score=338.95  Aligned_cols=254  Identities=11%  Similarity=0.052  Sum_probs=184.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc---cHHHHHHHHHHHHhc--CCCcccceE-------EEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ---GEREFQAEVEIISRV--HHKHLVSLV-------GYY  109 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l--~h~niv~l~-------~~~  109 (416)
                      ...|...+.||+|+||.||+|.+. +|+.||||++......   ....+.+|+.++..+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            345889999999999999999954 7899999999876532   234677885555555  699987754       555


Q ss_pred             EeC-----------------CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCe
Q 014904          110 TAG-----------------SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTR------LKIALGSAKGLAYLHEDCHPKI  166 (416)
Q Consensus       110 ~~~-----------------~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~------~~i~~~ia~aL~~LH~~~~~~i  166 (416)
                      ...                 ...++||||++ ++|.+++...+. .+.+..+      +.++.|++.||+|||+.   +|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i  215 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSK---GL  215 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence            443                 33799999998 899999975432 3455566      78889999999999999   99


Q ss_pred             eeecccCCcEEECCCCceEEeecccceeccCCCcceeecccccccccChhhhcc--CCCCchhhhHhHHHHHHHHHhCCC
Q 014904          167 IHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASS--GKLTEKSDVFSFGVMLLELITGRR  244 (416)
Q Consensus       167 iHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~--~~~t~ksDV~SlGvvL~elltG~~  244 (416)
                      +||||||+||||+.++.+||+|||+++.....    .....+|+.|+|||++.+  ..++.++|||||||+||||++|+.
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~  291 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL  291 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999876432    224567899999999987  679999999999999999999999


Q ss_pred             CCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          245 PVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       245 pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ||....+.....   |..         ..........+...........+.+++.+||+.+|++||++.|+++
T Consensus       292 Pf~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          292 PFGLVTPGIKGS---WKR---------PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             STTBCCTTCTTC---CCB---------CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCcCcccccc---hhh---------hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            998754321111   100         0000000111111111233467899999999999999999999874


No 214
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-41  Score=336.85  Aligned_cols=263  Identities=23%  Similarity=0.324  Sum_probs=197.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGS-----  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  113 (416)
                      ..++|.+.+.||+|+||.||+|.. .+|+.||||++.....  ...+.+.+|+.+++.++||||+++++++....     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            568999999999999999999996 5799999999965432  22357889999999999999999999997653     


Q ss_pred             -eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccc
Q 014904          114 -QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA  192 (416)
Q Consensus       114 -~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla  192 (416)
                       ..++||||+ +++|..++...   .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             ceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence             459999999 88999998763   589999999999999999999999   9999999999999999999999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhh------HHh
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWAR------PLL  265 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~------~~~  265 (416)
                      +.....    .+...||+.|+|||++.+ ..++.++|||||||+++||++|+.||........  +.....      ..+
T Consensus       176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~~~~~~  249 (367)
T 1cm8_A          176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ--LKEIMKVTGTPPAEF  249 (367)
T ss_dssp             EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHH
T ss_pred             cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHH
Confidence            876542    234578999999999887 6899999999999999999999999986543111  110000      000


Q ss_pred             HHhhhcC-------CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          266 NRAIEDG-------NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       266 ~~~~~~~-------~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...+...       .+.......+ ..........+.+++.+||+.||.+||++.|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            0000000       0000000111 11112234578899999999999999999999874


No 215
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=6.6e-41  Score=348.15  Aligned_cols=249  Identities=26%  Similarity=0.381  Sum_probs=204.5

Q ss_pred             hCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      .++|...++||+|+||.||+|... +|+.||||++....   ......+..|+.++.+++||||+++++++......++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            367888999999999999999964 69999999997532   22345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          119 YEFVPNNTLEFHLHGKG--RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      |||+++++|..++....  ...+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99999999999987643  44699999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      ..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........  ...+...     +..+..  
T Consensus       341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~-----i~~~~~--  410 (543)
T 3c4z_A          341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQR-----VLEQAV--  410 (543)
T ss_dssp             TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHH-----HHHCCC--
T ss_pred             CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHH-----Hhhccc--
Confidence            43322 2345799999999999999999999999999999999999999976542111  1111111     111111  


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRM  312 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~  312 (416)
                              .++......+.+++.+||+.+|.+||++
T Consensus       411 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          411 --------TYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             --------CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             --------CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence                    1122234578899999999999999976


No 216
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=6.7e-41  Score=325.29  Aligned_cols=271  Identities=23%  Similarity=0.306  Sum_probs=204.6

Q ss_pred             HHHhhCCCCcCceecccCcEEEEEEEe--CCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhc---CCCcccceEEEEE-
Q 014904           39 LARATDGFSDANLLGQGGFGYVHRGVL--PNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRV---HHKHLVSLVGYYT-  110 (416)
Q Consensus        39 l~~~t~~f~~~~~LG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l---~h~niv~l~~~~~-  110 (416)
                      +..+.++|.+.+.||+|+||.||+|..  .+|+.||||++......  ....+.+|+.+++.+   +||||+++++++. 
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~   85 (326)
T 1blx_A            6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   85 (326)
T ss_dssp             CCCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             ccCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence            345678999999999999999999997  46889999998743221  123566777777766   8999999999987 


Q ss_pred             ----eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEE
Q 014904          111 ----AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKV  186 (416)
Q Consensus       111 ----~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl  186 (416)
                          .....++|+||+. ++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+||+++.++.+||
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl  161 (326)
T 1blx_A           86 SRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL  161 (326)
T ss_dssp             EECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred             cccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence                4567899999997 6999998876655699999999999999999999999   9999999999999999999999


Q ss_pred             eecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHh-
Q 014904          187 ADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLL-  265 (416)
Q Consensus       187 ~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~-  265 (416)
                      +|||+++......  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......  .+.......- 
T Consensus       162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~  237 (326)
T 1blx_A          162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD--QLGKILDVIGL  237 (326)
T ss_dssp             CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCC
T ss_pred             ecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCC
Confidence            9999998664322  2234578999999999999999999999999999999999999998654311  1111000000 


Q ss_pred             --HHhhh-cCCcc-ccc---CccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          266 --NRAIE-DGNFD-TLV---DPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       266 --~~~~~-~~~~~-~~~---d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                        ...+. ..... ...   .......+.......+.+++.+||+.+|.+||++.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence              00000 00000 000   000001122233457889999999999999999999985


No 217
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=4.4e-41  Score=331.27  Aligned_cols=274  Identities=21%  Similarity=0.285  Sum_probs=193.9

Q ss_pred             HHHHHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           36 YEELARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        36 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      -++.....++|.+.++||+|+||.||+|.. .+|+.||||++...... ...+..++..+..++||||+++++++.....
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred             hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence            356778889999999999999999999996 46899999998754322 2356778888999999999999999976433


Q ss_pred             -------EEEEEEecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeeeecccCCcEEECC-CC
Q 014904          115 -------RMLVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAYLH--EDCHPKIIHRDIKAANILLDF-KF  182 (416)
Q Consensus       115 -------~~lV~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH--~~~~~~iiHrDIkp~NILl~~-~~  182 (416)
                             .++||||+.++ |...+..  .....+++..+..++.+++.||.|||  +.   +|+||||||+||||+. ++
T Consensus        94 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~  169 (360)
T 3e3p_A           94 RDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG  169 (360)
T ss_dssp             SCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred             ccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence                   78999999865 4333321  23346899999999999999999999  77   9999999999999996 89


Q ss_pred             ceEEeecccceeccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh
Q 014904          183 EAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA  261 (416)
Q Consensus       183 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~  261 (416)
                      .+||+|||+++........  ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||......  ..+....
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~~~  245 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEPN--VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--GQLHEIV  245 (360)
T ss_dssp             EEEECCCTTCBCCCTTSCC--CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH
T ss_pred             cEEEeeCCCceecCCCCCc--ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--HHHHHHH
Confidence            9999999999876543322  345789999999998665 4899999999999999999999999875431  1111111


Q ss_pred             hHH------hHHhhhcCCc-ccccC------ccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          262 RPL------LNRAIEDGNF-DTLVD------PKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       262 ~~~------~~~~~~~~~~-~~~~d------~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...      ....+..... ..+.+      ..............+.+++.+||+.||.+||++.||++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            100      0000000000 00000      000111222245689999999999999999999999864


No 218
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-41  Score=328.27  Aligned_cols=246  Identities=25%  Similarity=0.382  Sum_probs=192.9

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc------HHHHHHHHHHHHhc----CCCcccceE
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG------EREFQAEVEIISRV----HHKHLVSLV  106 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~------~~~~~~E~~~l~~l----~h~niv~l~  106 (416)
                      +.....++|.+.+.||+|+||.||+|.. .+++.||||++.......      ...+..|+.++.++    +|+||++++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            4455678999999999999999999995 578999999997654321      22456799999998    899999999


Q ss_pred             EEEEeCCeEEEEEEe-cCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC-CCCce
Q 014904          107 GYYTAGSQRMLVYEF-VPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD-FKFEA  184 (416)
Q Consensus       107 ~~~~~~~~~~lV~e~-~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~-~~~~~  184 (416)
                      +++......++|+|+ +.+++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+||+++ .++.+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~  179 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA  179 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence            999998999999999 78999999997643  589999999999999999999999   999999999999999 88999


Q ss_pred             EEeecccceeccCCCcceeecccccccccChhhhccCCCC-chhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH
Q 014904          185 KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLT-EKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP  263 (416)
Q Consensus       185 kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t-~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~  263 (416)
                      ||+|||+++......   .....||..|+|||++.+..+. .++||||||+++|+|++|+.||.....     .      
T Consensus       180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~------  245 (312)
T 2iwi_A          180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----I------  245 (312)
T ss_dssp             EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H------
T ss_pred             EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----H------
Confidence            999999998765432   2345689999999999877664 599999999999999999999864211     0      


Q ss_pred             HhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          264 LLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       264 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                       .     ....      .    ++......+.+++.+||+.+|++||++.||++.
T Consensus       246 -~-----~~~~------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 -L-----EAEL------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             -H-----HTCC------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -h-----hhcc------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0     1110      0    111223478899999999999999999999974


No 219
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=7e-41  Score=335.59  Aligned_cols=265  Identities=25%  Similarity=0.342  Sum_probs=198.7

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe------EE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ------RM  116 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~  116 (416)
                      ..+|.+.++||+|+||.||+|.+..+..||+|++......    ..+|+.+++.++||||+++++++.....      .+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            4579999999999999999999877777999988754322    2368999999999999999999965433      78


Q ss_pred             EEEEecCCCCHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC-CCCceEEeeccccee
Q 014904          117 LVYEFVPNNTLEFHLH-GKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD-FKFEAKVADFGLAKI  194 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~-~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~-~~~~~kl~DFGla~~  194 (416)
                      +||||++++.+..... ......+++..+..++.|++.||+|||+.   +|+||||||+||||+ .++.+||+|||+++.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            9999998765544432 12234699999999999999999999999   999999999999999 789999999999987


Q ss_pred             ccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH-------hH
Q 014904          195 ASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL-------LN  266 (416)
Q Consensus       195 ~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~-------~~  266 (416)
                      .......  ....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....  .+.+......+       +.
T Consensus       192 ~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~~~  267 (394)
T 4e7w_A          192 LIAGEPN--VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG--IDQLVEIIKVLGTPSREQIK  267 (394)
T ss_dssp             CCTTCCC--CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHH
T ss_pred             ccCCCCC--cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHH
Confidence            6543322  345789999999998765 589999999999999999999999987543  12222211100       00


Q ss_pred             ---HhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          267 ---RAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       267 ---~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                         .......+..+....+...+.......+.+++.+||+.+|.+||++.|+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence               0000111111111111111222244578999999999999999999999864


No 220
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=9.7e-41  Score=324.55  Aligned_cols=252  Identities=26%  Similarity=0.398  Sum_probs=198.6

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc--------ccHHHHHHHHHHHHhcCCCcccceEEEEEeC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG--------QGEREFQAEVEIISRVHHKHLVSLVGYYTAG  112 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  112 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||||++.....        .....+.+|+.++++++||||+++++++...
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            4578999999999999999999964 689999999875421        1123578999999999999999999998765


Q ss_pred             CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc---eEEeec
Q 014904          113 SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADF  189 (416)
Q Consensus       113 ~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~---~kl~DF  189 (416)
                      . .++||||+++++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.   +||+||
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df  161 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF  161 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred             c-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence            5 899999999999999886543  689999999999999999999999   9999999999999987665   999999


Q ss_pred             ccceeccCCCcceeecccccccccChhhhc---cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhH
Q 014904          190 GLAKIASDVNTHVSTRVMGTFGYLAPEYAS---SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLN  266 (416)
Q Consensus       190 Gla~~~~~~~~~~~~~~~gt~~YlaPE~~~---~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~  266 (416)
                      |+++......  ......||+.|+|||++.   ...++.++|||||||++|+|++|+.||.......  .+..       
T Consensus       162 g~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~-------  230 (322)
T 2ycf_A          162 GHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD-------  230 (322)
T ss_dssp             TTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHH-------
T ss_pred             ccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHH-------
Confidence            9998765322  223467999999999974   5678999999999999999999999997644311  1111       


Q ss_pred             HhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          267 RAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       267 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       .+..+.....  +....    .....+.+++.+||+.+|.+||++.++++
T Consensus       231 -~~~~~~~~~~--~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          231 -QITSGKYNFI--PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             -HHHHTCCCCC--HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -HHHhCccccC--chhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence             1112221110  11111    12357889999999999999999999875


No 221
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.6e-40  Score=336.85  Aligned_cols=200  Identities=26%  Similarity=0.328  Sum_probs=168.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEeC-----C
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTAG-----S  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  113 (416)
                      ..++|.+.++||+|+||.||+|.. .+++.||||++....  ....+.+.+|+.++++++|+||+++++++...     .
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            468999999999999999999995 468899999997543  22346788999999999999999999999776     5


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..++||||+. ++|..++....  .+++..++.++.|++.||.|||+.   +|+||||||+||||+.++.+||+|||+++
T Consensus       104 ~~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            7899999986 59999887543  599999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCCcc---------------------eeecccccccccChhhh-ccCCCCchhhhHhHHHHHHHHHhCCCCCC
Q 014904          194 IASDVNTH---------------------VSTRVMGTFGYLAPEYA-SSGKLTEKSDVFSFGVMLLELITGRRPVD  247 (416)
Q Consensus       194 ~~~~~~~~---------------------~~~~~~gt~~YlaPE~~-~~~~~t~ksDV~SlGvvL~elltG~~pf~  247 (416)
                      ........                     ..+..+||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            76543211                     22456899999999986 55679999999999999999998655543


No 222
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=4.2e-40  Score=328.19  Aligned_cols=210  Identities=24%  Similarity=0.271  Sum_probs=177.5

Q ss_pred             CHHHHHHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CC-----cccceEE
Q 014904           35 TYEELARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HK-----HLVSLVG  107 (416)
Q Consensus        35 ~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~  107 (416)
                      ...+.....++|.+.++||+|+||.||+|... +++.||||+++... ....++..|+.++..++ |+     +|+++++
T Consensus        45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  123 (382)
T 2vx3_A           45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR  123 (382)
T ss_dssp             CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred             EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence            33445567789999999999999999999954 68899999997432 23456778899988885 54     4999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC--CCCceE
Q 014904          108 YYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD--FKFEAK  185 (416)
Q Consensus       108 ~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~--~~~~~k  185 (416)
                      ++......++||||+. ++|.+++.......+++..+..++.|++.||.|||.. ..+|+||||||+||||+  .++.+|
T Consensus       124 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k  201 (382)
T 2vx3_A          124 HFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK  201 (382)
T ss_dssp             EEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred             eeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence            9999999999999996 5999988876555699999999999999999999942 12899999999999994  477899


Q ss_pred             EeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCc
Q 014904          186 VADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHT  251 (416)
Q Consensus       186 l~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~  251 (416)
                      |+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       202 L~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  263 (382)
T 2vx3_A          202 IVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE  263 (382)
T ss_dssp             ECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999999876542    2346789999999999999999999999999999999999999986543


No 223
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=2.6e-41  Score=327.21  Aligned_cols=261  Identities=23%  Similarity=0.336  Sum_probs=203.2

Q ss_pred             HHHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 014904           37 EELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ  114 (416)
Q Consensus        37 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  114 (416)
                      .+..-..++|.+.+.||+|+||.||+|....  .+|+|+++....  ...+.+.+|+.++.+++|+||+++++++.+...
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH  103 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence            3444456899999999999999999999743  499999875432  223467789999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      .++|+||+++++|.+++.... ..+++..++.++.|++.||+|||+.   +|+||||||+|||++ ++.+||+|||+++.
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             eEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccc
Confidence            999999999999999997643 3689999999999999999999999   999999999999998 67999999999875


Q ss_pred             ccCCC----cceeecccccccccChhhhcc---------CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh
Q 014904          195 ASDVN----THVSTRVMGTFGYLAPEYASS---------GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA  261 (416)
Q Consensus       195 ~~~~~----~~~~~~~~gt~~YlaPE~~~~---------~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~  261 (416)
                      .....    ........||+.|+|||++..         ..++.++||||||+++|||++|+.||......   .+.   
T Consensus       179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~---  252 (319)
T 2y4i_B          179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AII---  252 (319)
T ss_dssp             ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HHH---
T ss_pred             cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH---
Confidence            53211    112233468999999999864         45789999999999999999999999764421   111   


Q ss_pred             hHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          262 RPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       262 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                           ..+..+....+...    .    ....+.+++.+||+.+|.+||++.+|++.|+...
T Consensus       253 -----~~~~~~~~~~~~~~----~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          253 -----WQMGTGMKPNLSQI----G----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             -----HHHHTTCCCCCCCS----S----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             -----HHhccCCCCCCCcC----C----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence                 11122221111111    1    2235889999999999999999999999998654


No 224
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=3.7e-40  Score=326.36  Aligned_cols=271  Identities=21%  Similarity=0.304  Sum_probs=203.3

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcc-cHHHHHHHHHHHHhcCCCcccceEEEEEeC-----C
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQ-GEREFQAEVEIISRVHHKHLVSLVGYYTAG-----S  113 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  113 (416)
                      ...++|.+.++||+|+||.||+|... +++.||||++...... ....+.+|+.++.+++||||+++++++...     .
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            45679999999999999999999954 6889999999754433 235788999999999999999999999764     3


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      ..++|+||+. ++|..++...   .+++..++.|+.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          104 DVYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             CEEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence            6899999997 5888888654   589999999999999999999999   99999999999999999999999999998


Q ss_pred             eccCCCcce--eecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhh-hhhhhHHhHHhh
Q 014904          194 IASDVNTHV--STRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSL-VDWARPLLNRAI  269 (416)
Q Consensus       194 ~~~~~~~~~--~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l-~~~~~~~~~~~~  269 (416)
                      .........  .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... ...........+
T Consensus       177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  256 (364)
T 3qyz_A          177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL  256 (364)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHH
T ss_pred             ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            765433222  244679999999998754 4589999999999999999999999977553221111 000000000000


Q ss_pred             hc------CC-cccccCccc--cCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          270 ED------GN-FDTLVDPKL--HNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       270 ~~------~~-~~~~~d~~l--~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ..      .. ...+..+..  ...........+.+++.+||+.||.+||++.|+++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00      00 000000000  000011223568899999999999999999999864


No 225
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.4e-40  Score=334.18  Aligned_cols=203  Identities=23%  Similarity=0.352  Sum_probs=156.2

Q ss_pred             hhCCCCc-CceecccCcEEEEEEEeC---CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeE
Q 014904           42 ATDGFSD-ANLLGQGGFGYVHRGVLP---NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA--GSQR  115 (416)
Q Consensus        42 ~t~~f~~-~~~LG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  115 (416)
                      ..+.|.+ .++||+|+||.||+|.+.   +++.||||++.....  ...+.+|+.++++++||||+++++++..  ....
T Consensus        18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   95 (405)
T 3rgf_A           18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKV   95 (405)
T ss_dssp             HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred             hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence            3445665 448999999999999965   578999999975432  2468899999999999999999999965  6789


Q ss_pred             EEEEEecCCCCHHHHhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE----CCCCce
Q 014904          116 MLVYEFVPNNTLEFHLHGK-------GRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL----DFKFEA  184 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl----~~~~~~  184 (416)
                      ++||||+.+ +|.+++...       ....+++..++.|+.|++.||+|||+.   +|+||||||+||||    +.++.+
T Consensus        96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence            999999965 666666421       122589999999999999999999999   99999999999999    778899


Q ss_pred             EEeecccceeccCCCc--ceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCC
Q 014904          185 KVADFGLAKIASDVNT--HVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTH  250 (416)
Q Consensus       185 kl~DFGla~~~~~~~~--~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~  250 (416)
                      ||+|||+++.......  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999987654322  222446799999999999874 59999999999999999999999997644


No 226
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2.5e-40  Score=328.70  Aligned_cols=265  Identities=22%  Similarity=0.292  Sum_probs=194.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAGS-----  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  113 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++.....  .....+.+|+.+++.++||||+++++++....     
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            457999999999999999999995 4689999999975432  23356889999999999999999999997654     


Q ss_pred             -eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccc
Q 014904          114 -QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA  192 (416)
Q Consensus       114 -~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla  192 (416)
                       ..++||||+.+ +|.+.+..    .+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             cceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence             78999999975 67777753    488999999999999999999999   9999999999999999999999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhh-----------
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWA-----------  261 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~-----------  261 (416)
                      +......  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........  +....           
T Consensus       175 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~  250 (371)
T 2xrw_A          175 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFM  250 (371)
T ss_dssp             -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHC-CCCCCHHHH
T ss_pred             ccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHH
Confidence            8654322  22346789999999999999999999999999999999999999976543111  00000           


Q ss_pred             ---hHHhHHhhhcC-Cc-----ccccCcccc---CcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          262 ---RPLLNRAIEDG-NF-----DTLVDPKLH---NEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       262 ---~~~~~~~~~~~-~~-----~~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                         .+.+....... .+     ..+......   ..........+.+++.+||+.||.+||++.|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence               00000000000 00     000000000   00112235678999999999999999999999874


No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=8.4e-41  Score=337.80  Aligned_cols=263  Identities=25%  Similarity=0.335  Sum_probs=196.8

Q ss_pred             CCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEeC------CeEE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTAG------SQRM  116 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~  116 (416)
                      .+|.+.++||+|+||.||+|.+. +|+.||||++.....    .+.+|+.++++++|+||++++++|...      ...+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            36889999999999999999964 689999999875432    234699999999999999999998642      2367


Q ss_pred             EEEEecCCCCHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC-CceEEeecccce
Q 014904          117 LVYEFVPNNTLEFHLHG--KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK-FEAKVADFGLAK  193 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~-~~~kl~DFGla~  193 (416)
                      +||||+++ +|...+..  .....+++..++.++.|+++||.|||+.   +|+||||||+||||+.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999976 55544432  2234699999999999999999999998   99999999999999965 568999999998


Q ss_pred             eccCCCcceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH---hHHhh
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL---LNRAI  269 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~---~~~~~  269 (416)
                      .......  .....||+.|+|||++.+. .++.++|||||||+||||++|+.||.....  .+.+......+   ....+
T Consensus       206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~--~~~l~~i~~~lg~p~~~~~  281 (420)
T 1j1b_A          206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG--VDQLVEIIKVLGTPTREQI  281 (420)
T ss_dssp             ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHH
T ss_pred             hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHH
Confidence            7654332  2345789999999999765 799999999999999999999999987543  22222222110   00000


Q ss_pred             --hcCCcccccCccccC-----cCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          270 --EDGNFDTLVDPKLHN-----EYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       270 --~~~~~~~~~d~~l~~-----~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                        ....+..+..+.+..     .+.......+.+|+.+||+.+|.+||++.|+++.
T Consensus       282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence              011222222222111     1222334678999999999999999999999864


No 228
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=1.1e-40  Score=355.76  Aligned_cols=249  Identities=25%  Similarity=0.353  Sum_probs=204.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC---cccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS---GQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.++||+|+||.||+|... +++.||||+++...   ......+..|..++..+ +|+||+++++++.+....+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            3568999999999999999999954 68899999997531   22335678899999987 7999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      |||||+++++|..++...+  .+++..++.++.|++.||.|||+.   +||||||||+||||+.++.+||+|||+++...
T Consensus       419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            9999999999999997654  589999999999999999999999   99999999999999999999999999998643


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCccc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDT  276 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  276 (416)
                      .... ......||+.|+|||++.+..++.++|||||||+||||++|+.||.....   ..+       + ..+..+.+  
T Consensus       494 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~---~~~-------~-~~i~~~~~--  559 (674)
T 3pfq_A          494 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DEL-------F-QSIMEHNV--  559 (674)
T ss_dssp             CTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH-------H-HHHHSSCC--
T ss_pred             cCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH---HHH-------H-HHHHhCCC--
Confidence            3222 23457899999999999999999999999999999999999999976543   111       1 11122221  


Q ss_pred             ccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 014904          277 LVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRM-----SQIVR  317 (416)
Q Consensus       277 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~-----~evv~  317 (416)
                              .++......+.+|+.+||+.+|.+||++     .||++
T Consensus       560 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          560 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             --------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             --------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                    1222334578999999999999999997     56654


No 229
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.5e-40  Score=325.86  Aligned_cols=254  Identities=21%  Similarity=0.279  Sum_probs=176.5

Q ss_pred             hhCCCCcCc-eecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe----CCeE
Q 014904           42 ATDGFSDAN-LLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA----GSQR  115 (416)
Q Consensus        42 ~t~~f~~~~-~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  115 (416)
                      ..++|.+.+ +||+|+||.||+|... +|+.||||++...    ..........+..+.|+||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            567899855 6999999999999965 6899999999753    2222333344667799999999999876    4458


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC---CCceEEeecccc
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF---KFEAKVADFGLA  192 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~---~~~~kl~DFGla  192 (416)
                      ++||||+++++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+|||++.   ++.+||+|||++
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            9999999999999999877666799999999999999999999999   9999999999999976   455999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcC
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDG  272 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~  272 (416)
                      +......   .....||+.|+|||++.+..++.++||||||+++|+|++|+.||.........  ..     ....+..+
T Consensus       179 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~-----~~~~~~~~  248 (336)
T 3fhr_A          179 KETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PG-----MKRRIRLG  248 (336)
T ss_dssp             EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred             eeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hh-----HHHhhhcc
Confidence            8654322   23457899999999998889999999999999999999999999764331100  00     00000111


Q ss_pred             CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          273 NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       273 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ..      .............+.+++.+||+.+|.+||++.|+++.
T Consensus       249 ~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          249 QY------GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cc------ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            10      00111111234578899999999999999999999973


No 230
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=4.8e-41  Score=324.60  Aligned_cols=266  Identities=21%  Similarity=0.301  Sum_probs=195.4

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEE----------
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYT----------  110 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------  110 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.          
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            3578999999999999999999965 58999999998766555678899999999999999999999873          


Q ss_pred             ----eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC-CCCceE
Q 014904          111 ----AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD-FKFEAK  185 (416)
Q Consensus       111 ----~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~-~~~~~k  185 (416)
                          +....++||||+. ++|.+++...   .+++..++.++.|++.||+|||+.   +|+||||||+|||++ .++.+|
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence                4467899999997 5899988642   589999999999999999999999   999999999999997 567999


Q ss_pred             EeecccceeccCCCcc--eeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhh
Q 014904          186 VADFGLAKIASDVNTH--VSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWAR  262 (416)
Q Consensus       186 l~DFGla~~~~~~~~~--~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~  262 (416)
                      |+|||+++........  ......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||........  +.....
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~  239 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--MQLILE  239 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH
Confidence            9999999876432221  1234567999999998865 6799999999999999999999999987543111  110000


Q ss_pred             HH------hHHhhhcCCccccc-----Ccccc-CcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          263 PL------LNRAIEDGNFDTLV-----DPKLH-NEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       263 ~~------~~~~~~~~~~~~~~-----d~~l~-~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ..      ....+. ..+...+     .+... ..........+.+++.+||+.+|.+||++.|+++
T Consensus       240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          240 SIPVVHEEDRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HSCCCCHHHHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hcCCCchhhhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            00      000000 0000000     00000 0001123457899999999999999999999986


No 231
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=2.2e-40  Score=317.24  Aligned_cols=253  Identities=24%  Similarity=0.381  Sum_probs=195.3

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEEEEe---------
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYYTA---------  111 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------  111 (416)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++... ......+.+|+.++++++||||+++++++.+         
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            457899999999999999999996 47899999999643 2334578899999999999999999999865         


Q ss_pred             ----CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEe
Q 014904          112 ----GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVA  187 (416)
Q Consensus       112 ----~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~  187 (416)
                          ....++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence                356799999999999999997543 3578899999999999999999999   99999999999999999999999


Q ss_pred             ecccceeccCCC-------------cceeecccccccccChhhhccC-CCCchhhhHhHHHHHHHHHhCCCCCCCCCccc
Q 014904          188 DFGLAKIASDVN-------------THVSTRVMGTFGYLAPEYASSG-KLTEKSDVFSFGVMLLELITGRRPVDSTHTFV  253 (416)
Q Consensus       188 DFGla~~~~~~~-------------~~~~~~~~gt~~YlaPE~~~~~-~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~  253 (416)
                      |||++.......             ........||+.|+|||++.+. .++.++|||||||++|+|++   ||....   
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---  232 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---  232 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---
Confidence            999998654321             1122345789999999999764 78999999999999999998   443211   


Q ss_pred             chhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          254 EDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                        .....     ...+....      ..+...++......+.+++.+||+.||.+||++.++++.
T Consensus       233 --~~~~~-----~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          233 --ERVNI-----LKKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             --HHHHH-----HHHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --hHHHH-----HHhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence              11111     11111211      112223344445678999999999999999999999863


No 232
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4.1e-40  Score=325.66  Aligned_cols=268  Identities=21%  Similarity=0.326  Sum_probs=203.6

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-----------CCcccceEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-----------HKHLVSLVGYYT  110 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  110 (416)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+|+.++.+++           |+||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            46899999999999999999995 578999999997432 33457888999999886           899999999998


Q ss_pred             eCC----eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC------C
Q 014904          111 AGS----QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD------F  180 (416)
Q Consensus       111 ~~~----~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~------~  180 (416)
                      ...    ..++|||++ +++|.+++.......+++..++.|+.|++.||.|||+.+  +|+||||||+||||+      .
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence            644    789999999 899999998765556999999999999999999999964  899999999999994      4


Q ss_pred             CCceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCccc----chh
Q 014904          181 KFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFV----EDS  256 (416)
Q Consensus       181 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~----~~~  256 (416)
                      .+.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......    ...
T Consensus       174 ~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  249 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  249 (373)
T ss_dssp             EEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             cceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence            4579999999998765432    33578999999999999999999999999999999999999998654211    111


Q ss_pred             hhhhhh---HHhHHhhhcC-----------CcccccCcc---------ccCcCCHHHHHHHHHHHHHhhccCCCCCCCHH
Q 014904          257 LVDWAR---PLLNRAIEDG-----------NFDTLVDPK---------LHNEYNHNEMARMVACAAACVRHSARRRPRMS  313 (416)
Q Consensus       257 l~~~~~---~~~~~~~~~~-----------~~~~~~d~~---------l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~  313 (416)
                      +.....   ..-...+..+           .+..+....         ....++......+.+++.+||+.||.+||++.
T Consensus       250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            111100   0000000000           000000000         01234567788999999999999999999999


Q ss_pred             HHHHH
Q 014904          314 QIVRA  318 (416)
Q Consensus       314 evv~~  318 (416)
                      ||++.
T Consensus       330 ell~h  334 (373)
T 1q8y_A          330 GLVNH  334 (373)
T ss_dssp             HHHTC
T ss_pred             HHhhC
Confidence            99863


No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.3e-39  Score=311.29  Aligned_cols=253  Identities=24%  Similarity=0.362  Sum_probs=204.9

Q ss_pred             HHhhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCC--cccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           40 ARATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGS--GQGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        40 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ....++|.+.+.||+|+||.||+|... +++.||||++....  ......+.+|+.++++++||||+++++++.+....+
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence            345678999999999999999999965 78999999987542  234568899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC---CceEEeecccce
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK---FEAKVADFGLAK  193 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~---~~~kl~DFGla~  193 (416)
                      +|+||+++++|.+.+....  .+++..++.++.+++.||.|||+.   +|+||||||+||+++.+   +.+||+|||++.
T Consensus        98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            9999999999988886543  589999999999999999999999   99999999999999764   469999999998


Q ss_pred             eccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCC
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGN  273 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~  273 (416)
                      .......  .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||......   .+        ...+..+.
T Consensus       173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~--------~~~~~~~~  238 (287)
T 2wei_A          173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DI--------LKRVETGK  238 (287)
T ss_dssp             TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HH--------HHHHHHCC
T ss_pred             eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HH--------HHHHHcCC
Confidence            6644322  233468999999999875 5899999999999999999999999765421   11        11122232


Q ss_pred             cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          274 FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       274 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      +... .+ ...    .....+.+++.+||+.+|.+||++.|+++
T Consensus       239 ~~~~-~~-~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          239 YAFD-LP-QWR----TISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CCCC-SG-GGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCC-ch-hhh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            2110 00 001    12347889999999999999999999987


No 234
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=4.4e-40  Score=322.45  Aligned_cols=267  Identities=18%  Similarity=0.268  Sum_probs=201.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CC-cEEEEEEeecCCcccHHHHHHHHHHHHhcCCCc------ccceEEEEEeCC
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NG-KEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH------LVSLVGYYTAGS  113 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~  113 (416)
                      ..++|.+.+.||+|+||.||+|... ++ +.||||+++... .....+..|+.++++++|++      ++.+++++....
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            3579999999999999999999964 44 689999997532 33457888999999997665      899999999999


Q ss_pred             eEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEE---------------
Q 014904          114 QRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILL---------------  178 (416)
Q Consensus       114 ~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl---------------  178 (416)
                      ..++||||+ ++++.+.+.......+++..++.++.|++.||.|||+.   +|+||||||+|||+               
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence            999999999 56666666655545799999999999999999999999   99999999999999               


Q ss_pred             ----CCCCceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccc
Q 014904          179 ----DFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVE  254 (416)
Q Consensus       179 ----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~  254 (416)
                          +.++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                567899999999998754322    335799999999999999999999999999999999999999986543211


Q ss_pred             hhhhhhh-hHHhHHhhhcCC-cccccCc---------------------cccCcCCHHHHHHHHHHHHHhhccCCCCCCC
Q 014904          255 DSLVDWA-RPLLNRAIEDGN-FDTLVDP---------------------KLHNEYNHNEMARMVACAAACVRHSARRRPR  311 (416)
Q Consensus       255 ~~l~~~~-~~~~~~~~~~~~-~~~~~d~---------------------~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt  311 (416)
                      ....... .+.....+.... .......                     .........+...+.+++.+||+.||.+||+
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence            1110000 000000000000 0000000                     0001122345568999999999999999999


Q ss_pred             HHHHHH
Q 014904          312 MSQIVR  317 (416)
Q Consensus       312 ~~evv~  317 (416)
                      +.||++
T Consensus       328 ~~e~l~  333 (355)
T 2eu9_A          328 LAEALL  333 (355)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            999984


No 235
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=8e-41  Score=355.83  Aligned_cols=256  Identities=25%  Similarity=0.409  Sum_probs=204.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCC----CcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPN----GKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  116 (416)
                      ..++|.+.+.||+|+||.||+|.+..    +..||||+++.... ...+.+.+|+.++++++||||+++++++.+ ...+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence            44678888999999999999999642    45799999876433 233678999999999999999999999854 5689


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      +||||+++++|.+++.... ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       467 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred             EEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence            9999999999999997543 3589999999999999999999999   99999999999999999999999999998775


Q ss_pred             CCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcc
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFD  275 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  275 (416)
                      ...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....   ..+.        ..+..+...
T Consensus       543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---~~~~--------~~i~~~~~~  611 (656)
T 2j0j_A          543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---NDVI--------GRIENGERL  611 (656)
T ss_dssp             C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHH--------HHHHHTCCC
T ss_pred             CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH---HHHH--------HHHHcCCCC
Confidence            544433344567889999999999999999999999999999997 9999976443   1111        111222211


Q ss_pred             cccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccc
Q 014904          276 TLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGD  322 (416)
Q Consensus       276 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~  322 (416)
                               ..+...+..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       612 ---------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          612 ---------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                     11223345789999999999999999999999999854


No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.8e-40  Score=321.73  Aligned_cols=255  Identities=26%  Similarity=0.431  Sum_probs=179.2

Q ss_pred             hCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc-ccHHHHHHHHH-HHHhcCCCcccceEEEEEeCCeEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG-QGEREFQAEVE-IISRVHHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      .++|...+.||+|+||.||+|.. .+|+.||||++..... ....++..|+. +++.++||||+++++++......++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            37889999999999999999996 4789999999986532 22345555665 677789999999999999999999999


Q ss_pred             EecCCCCHHHHhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceecc
Q 014904          120 EFVPNNTLEFHLHG---KGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIAS  196 (416)
Q Consensus       120 e~~~~~sL~~~l~~---~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~  196 (416)
                      ||+.+ +|.+++..   .....+++..+..++.+++.||.|||+..  +|+||||||+|||++.++.+||+|||+++...
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            99975 77766642   22346899999999999999999999964  79999999999999999999999999998665


Q ss_pred             CCCcceeecccccccccChhhh----ccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcC
Q 014904          197 DVNTHVSTRVMGTFGYLAPEYA----SSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDG  272 (416)
Q Consensus       197 ~~~~~~~~~~~gt~~YlaPE~~----~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~  272 (416)
                      ....  .....||+.|+|||++    .+..++.++||||||+++|+|++|+.||.......+ .+.         .+..+
T Consensus       178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~---------~~~~~  245 (327)
T 3aln_A          178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-QLT---------QVVKG  245 (327)
T ss_dssp             ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------C---------CCCCS
T ss_pred             cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-HHH---------HHhcC
Confidence            4322  2334689999999998    456789999999999999999999999975432100 000         00111


Q ss_pred             CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          273 NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       273 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ..     +.+...........+.+++.+||+.+|.+||++.+|++
T Consensus       246 ~~-----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          246 DP-----PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CC-----CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CC-----CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            11     11111111223457899999999999999999999975


No 237
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=2e-40  Score=325.68  Aligned_cols=266  Identities=20%  Similarity=0.288  Sum_probs=200.4

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeC-----Ce
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAG-----SQ  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  114 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            5689999999999999999999964 689999999975432 2235688999999999999999999998764     67


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      .++|+||+. ++|..++...   .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            899999997 5888888753   589999999999999999999999   999999999999999999999999999987


Q ss_pred             ccCCCcce---------eecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH
Q 014904          195 ASDVNTHV---------STRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL  264 (416)
Q Consensus       195 ~~~~~~~~---------~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~  264 (416)
                      ........         .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......  .+.... ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~-~~  238 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH--QLLLIF-GI  238 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHH-HH
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHH-HH
Confidence            65322211         123578999999998764 679999999999999999999999998654311  111000 00


Q ss_pred             hHHhhhcCCcccc---------------cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          265 LNRAIEDGNFDTL---------------VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       265 ~~~~~~~~~~~~~---------------~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ............+               ....+. .........+.+++.+||+.||.+||++.||++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLE-KMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHH-HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hCCCchhccccccccchhhHHhhcccCCCCcchh-hhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0000000000000               000000 0011234578899999999999999999999873


No 238
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5.9e-40  Score=326.00  Aligned_cols=260  Identities=21%  Similarity=0.316  Sum_probs=197.2

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE---
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR---  115 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  115 (416)
                      ..++|.+.+.||+|+||.||+|.. .+|+.||||++......  ....+.+|+.+++.++||||+++++++......   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            568999999999999999999995 46899999999764332  235788999999999999999999999876654   


Q ss_pred             ---EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccc
Q 014904          116 ---MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA  192 (416)
Q Consensus       116 ---~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla  192 (416)
                         ++||||+. ++|...+..    .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence               99999997 578777633    489999999999999999999999   9999999999999999999999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH--------
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP--------  263 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~--------  263 (416)
                      +.....    .....||+.|+|||++.+ ..++.++|||||||++++|++|+.||......  +.+......        
T Consensus       192 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~  265 (371)
T 4exu_A          192 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGTEF  265 (371)
T ss_dssp             ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHH
T ss_pred             cccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCcHHH
Confidence            865432    233578999999999987 68999999999999999999999999865431  111111000        


Q ss_pred             -------HhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          264 -------LLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       264 -------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                             ........  +.......+ ..........+.+++.+||+.+|.+||++.|+++.
T Consensus       266 ~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          266 VQKLNDKAAKSYIQS--LPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HTTCSCHHHHHHHHH--SCCCCCCCH-HHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHhhhhhhhhhhhc--cCCCcchhH-HHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                   00000000  000000000 00011224578999999999999999999999865


No 239
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1.4e-40  Score=330.49  Aligned_cols=264  Identities=22%  Similarity=0.313  Sum_probs=185.0

Q ss_pred             HhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEeC-----
Q 014904           41 RATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTAG-----  112 (416)
Q Consensus        41 ~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----  112 (416)
                      ...++|.+.+.||+|+||.||+|.. .+|+.||||++.....  .....+.+|+.+++.++||||+++++++...     
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            3568999999999999999999994 5789999999975432  2345788999999999999999999998754     


Q ss_pred             -CeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeeccc
Q 014904          113 -SQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGL  191 (416)
Q Consensus       113 -~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGl  191 (416)
                       ...++|+|++ +++|..++..   ..+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       106 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          106 FNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             CCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred             CCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence             5679999998 7888888864   2599999999999999999999999   999999999999999999999999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHH------
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPL------  264 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~------  264 (416)
                      ++.....    .+...||+.|+|||++.+ ..++.++|||||||+++||++|+.||........  +.......      
T Consensus       179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~  252 (367)
T 2fst_X          179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ--LKLILRLVGTPGAE  252 (367)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHH
T ss_pred             ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHH
Confidence            9865432    234678999999999877 6799999999999999999999999977543111  11100000      


Q ss_pred             hHHhhhcC-------CcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          265 LNRAIEDG-------NFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       265 ~~~~~~~~-------~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ....+...       .+.......+. .........+.+|+.+||+.||.+||++.|+++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          253 LLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHTTCCCHHHHHHHHTSCCCCCCCHH-HHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhhhHHHHHHHhccCCCCCCCHH-HHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            00000000       00000000000 0001123568899999999999999999999864


No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2e-39  Score=329.12  Aligned_cols=251  Identities=22%  Similarity=0.324  Sum_probs=189.4

Q ss_pred             CCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEEEec
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFV  122 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~  122 (416)
                      +.|...++||+|+||+||.+...+|+.||||++...   ....+.+|+.++.++ +||||+++++++.+....++||||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            344556889999999998777778999999998753   235678899999886 8999999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCC-------------Cce
Q 014904          123 PNNTLEFHLHGKGRPT-----MDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFK-------------FEA  184 (416)
Q Consensus       123 ~~~sL~~~l~~~~~~~-----l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~-------------~~~  184 (416)
                      . ++|.+++.......     .++..++.|+.|++.||+|||+.   +|+||||||+||||+.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence            5 69999997654311     13334578999999999999999   99999999999999654             489


Q ss_pred             EEeecccceeccCCCcce---eecccccccccChhhhcc-------CCCCchhhhHhHHHHHHHHHh-CCCCCCCCCccc
Q 014904          185 KVADFGLAKIASDVNTHV---STRVMGTFGYLAPEYASS-------GKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFV  253 (416)
Q Consensus       185 kl~DFGla~~~~~~~~~~---~~~~~gt~~YlaPE~~~~-------~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~  253 (416)
                      ||+|||+++.........   .....||++|+|||++.+       ..++.++|||||||++|||++ |+.||.......
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            999999998775543221   234579999999999975       678999999999999999999 999997543211


Q ss_pred             chhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          254 EDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       254 ~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                       ..+       +     .+...   .+.+....+......+.+++.+||+.+|.+||++.||++
T Consensus       248 -~~i-------~-----~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 -SNI-------I-----RGIFS---LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             -HHH-------H-----HTCCC---CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -HHH-------h-----cCCCC---cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence             111       0     11111   011112224456678999999999999999999999985


No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=4.3e-39  Score=311.20  Aligned_cols=253  Identities=23%  Similarity=0.368  Sum_probs=181.8

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc-H-HHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG-E-REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  118 (416)
                      ..++|.+.+.||+|+||.||+|... +|+.||||++....... . +.+.++..++..++||||+++++++.+....++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3578999999999999999999964 78999999998654322 2 3344555678888999999999999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCC
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDV  198 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~  198 (416)
                      |||+ ++.+..+.... ...+++..++.++.+++.||.|||+.+  +|+||||||+||+++.++.+||+|||++......
T Consensus       103 ~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          103 MELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             ECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             Eecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            9999 55666555432 236899999999999999999999832  8999999999999999999999999999765443


Q ss_pred             CcceeecccccccccChhhhc-----cCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCC
Q 014904          199 NTHVSTRVMGTFGYLAPEYAS-----SGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGN  273 (416)
Q Consensus       199 ~~~~~~~~~gt~~YlaPE~~~-----~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~  273 (416)
                      ..  .....||+.|+|||++.     ...++.++||||||+++|+|++|+.||......  ..       .+.... .+.
T Consensus       179 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~-------~~~~~~-~~~  246 (318)
T 2dyl_A          179 KA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FE-------VLTKVL-QEE  246 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HH-------HHHHHH-HSC
T ss_pred             cc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HH-------HHHHHh-ccC
Confidence            22  23457899999999994     567899999999999999999999999763321  11       111111 111


Q ss_pred             cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          274 FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       274 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ...+..   ..    .....+.+++.+||+.+|.+||++.||++
T Consensus       247 ~~~~~~---~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 PPLLPG---HM----GFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCCCS---SS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCCc---cC----CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            111110   01    12347889999999999999999999985


No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.6e-40  Score=323.29  Aligned_cols=248  Identities=22%  Similarity=0.351  Sum_probs=201.0

Q ss_pred             HHHHHHhhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc------cHHHHHHHHHHHHhcC--CCcccceE
Q 014904           36 YEELARATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ------GEREFQAEVEIISRVH--HKHLVSLV  106 (416)
Q Consensus        36 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~  106 (416)
                      ..+.....++|.+.++||+|+||.||+|.. .+++.||||++......      ....+..|+.++.+++  |+||++++
T Consensus        35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~  114 (320)
T 3a99_A           35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL  114 (320)
T ss_dssp             -----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             ccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEE
Confidence            345556778999999999999999999995 57899999999754322      1235678999999996  59999999


Q ss_pred             EEEEeCCeEEEEEEecCC-CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC-CCCce
Q 014904          107 GYYTAGSQRMLVYEFVPN-NTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD-FKFEA  184 (416)
Q Consensus       107 ~~~~~~~~~~lV~e~~~~-~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~-~~~~~  184 (416)
                      +++......++|+|++.+ ++|.+++....  .+++..++.++.|++.||.|||+.   +|+||||||+|||++ .++.+
T Consensus       115 ~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~  189 (320)
T 3a99_A          115 DWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGEL  189 (320)
T ss_dssp             EEEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEE
T ss_pred             EEEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCE
Confidence            999999999999999976 89999987543  589999999999999999999999   999999999999999 78899


Q ss_pred             EEeecccceeccCCCcceeecccccccccChhhhccCCC-CchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH
Q 014904          185 KVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKL-TEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP  263 (416)
Q Consensus       185 kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~-t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~  263 (416)
                      ||+|||+++......   .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....     .      
T Consensus       190 kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~------  255 (320)
T 3a99_A          190 KLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----I------  255 (320)
T ss_dssp             EECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H------
T ss_pred             EEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----h------
Confidence            999999998765432   233568999999999987765 6889999999999999999999864211     0      


Q ss_pred             HhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          264 LLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       264 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                       .     .+..      .....    ....+.+++.+||+.+|++||++.||++.
T Consensus       256 -~-----~~~~------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          256 -I-----RGQV------FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             -H-----HCCC------CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -h-----cccc------ccccc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0     1110      01112    23478899999999999999999999863


No 243
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.5e-39  Score=320.24  Aligned_cols=262  Identities=21%  Similarity=0.307  Sum_probs=197.1

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCcc--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe----
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQ--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ----  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  114 (416)
                      ..++|...+.||+|+||.||+|.. .+|+.||||++......  ....+.+|+.+++.++||||+++++++.....    
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            457899999999999999999996 46899999999764322  23578899999999999999999999987654    


Q ss_pred             --EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccc
Q 014904          115 --RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLA  192 (416)
Q Consensus       115 --~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla  192 (416)
                        .++||||+. ++|..++..    .+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence              499999997 577776642    489999999999999999999999   9999999999999999999999999999


Q ss_pred             eeccCCCcceeecccccccccChhhhcc-CCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhH------Hh
Q 014904          193 KIASDVNTHVSTRVMGTFGYLAPEYASS-GKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARP------LL  265 (416)
Q Consensus       193 ~~~~~~~~~~~~~~~gt~~YlaPE~~~~-~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~------~~  265 (416)
                      +.....    .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......  .+......      .+
T Consensus       174 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~  247 (353)
T 3coi_A          174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD--QLTQILKVTGVPGTEF  247 (353)
T ss_dssp             TC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH--HHHHHHHHHCBCCHHH
T ss_pred             cCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHH
Confidence            765432    233578999999999877 678999999999999999999999997654311  11110000      00


Q ss_pred             HHhhhc-------CCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          266 NRAIED-------GNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       266 ~~~~~~-------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      ...+..       ..+.....+.+ ..........+.+++.+||+.+|.+||++.|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          248 VQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            000000       00000000111 11122345678999999999999999999999864


No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.2e-39  Score=325.41  Aligned_cols=250  Identities=23%  Similarity=0.325  Sum_probs=188.7

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e  120 (416)
                      ...+|...++||+|+||+|+.....+|+.||||++......   .+.+|+.+++.+ +||||+++++++.+....++|||
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            34568899999999999976555668999999999764432   356799999999 79999999999999999999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC-----CCceEEeecccceec
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF-----KFEAKVADFGLAKIA  195 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~-----~~~~kl~DFGla~~~  195 (416)
                      |+. ++|.+++..... .+.+..++.++.|++.||.|||+.   +|+||||||+||||+.     ...+||+|||+++..
T Consensus        99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A           99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            996 599998876543 344445678999999999999999   9999999999999943     345889999999876


Q ss_pred             cCCCc--ceeecccccccccChhhhc---cCCCCchhhhHhHHHHHHHHHh-CCCCCCCCCcccchhhhhhhhHHhHHhh
Q 014904          196 SDVNT--HVSTRVMGTFGYLAPEYAS---SGKLTEKSDVFSFGVMLLELIT-GRRPVDSTHTFVEDSLVDWARPLLNRAI  269 (416)
Q Consensus       196 ~~~~~--~~~~~~~gt~~YlaPE~~~---~~~~t~ksDV~SlGvvL~ellt-G~~pf~~~~~~~~~~l~~~~~~~~~~~~  269 (416)
                      .....  .......||++|+|||++.   ...++.++|||||||++|||++ |+.||.......   .        ....
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~--------~~~~  242 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---A--------NILL  242 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---H--------HHHT
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---H--------HHHh
Confidence            54322  1224467999999999997   4577889999999999999999 999986533210   0        0001


Q ss_pred             hcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 014904          270 EDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVR  317 (416)
Q Consensus       270 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~  317 (416)
                      ....... .      .........+.+++.+||+.+|.+||++.||++
T Consensus       243 ~~~~~~~-~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          243 GACSLDC-L------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TCCCCTT-S------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCccc-c------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1111111 1      112234556789999999999999999999983


No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.1e-38  Score=306.06  Aligned_cols=233  Identities=12%  Similarity=0.117  Sum_probs=185.0

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC-CCcEEEEEEeecCCccc---HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSGQG---EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML  117 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  117 (416)
                      ..++|.+.+.||+|+||.||+|... +++.||||++.......   .+.+.+|+.++.+++||||+++++++.+.+..++
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            3478999999999999999999965 58999999998654332   3578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccC
Q 014904          118 VYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASD  197 (416)
Q Consensus       118 V~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~  197 (416)
                      ||||+++++|.+++...    ........|+.|++.||.|||+.   +|+||||||+||||+.++.+||+++        
T Consensus       109 v~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~--------  173 (286)
T 3uqc_A          109 VAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP--------  173 (286)
T ss_dssp             EEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC--------
T ss_pred             EEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec--------
Confidence            99999999999999542    34556788999999999999999   9999999999999999999999743        


Q ss_pred             CCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccc
Q 014904          198 VNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTL  277 (416)
Q Consensus       198 ~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  277 (416)
                                   +|++       .++.++|||||||++|||++|+.||...........   +.    .. ..+..   
T Consensus       174 -------------~~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~---~~----~~-~~~~~---  222 (286)
T 3uqc_A          174 -------------ATMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP---AE----RD-TAGQP---  222 (286)
T ss_dssp             -------------CCCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE---CC----BC-TTSCB---
T ss_pred             -------------cccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH---HH----HH-hccCC---
Confidence                         3443       368999999999999999999999987554211000   00    00 00000   


Q ss_pred             cCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhccccC
Q 014904          278 VDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDAS  324 (416)
Q Consensus       278 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~~  324 (416)
                      ..+   ..........+.+++.+||+.||++| ++.|+++.|+....
T Consensus       223 ~~~---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          223 IEP---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             CCH---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             CCh---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            000   01112234578999999999999999 99999999986543


No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.4e-38  Score=340.17  Aligned_cols=239  Identities=20%  Similarity=0.316  Sum_probs=193.5

Q ss_pred             hhCCCCcCceecccCcEEEEEEEeC--CCcEEEEEEeecCCc-ccHHHHHHHHHHHHhcCCCcccceEEEEEeCCe----
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVLP--NGKEVAIKQLKAGSG-QGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQ----  114 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~~--~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  114 (416)
                      ..++|.+.++||+|+||.||+|.+.  +|+.||||++..... .....+..|+.++.+++||||+++++++.....    
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            3478999999999999999999965  689999999875432 334578899999999999999999999987655    


Q ss_pred             -EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          115 -RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       115 -~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                       .+|||||+++++|.+++..    .+++..++.|+.|++.||.|||+.   +||||||||+||||+.+ .+||+|||+++
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             EEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             eeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence             7999999999999887654    599999999999999999999999   99999999999999886 89999999998


Q ss_pred             eccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCC
Q 014904          194 IASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGN  273 (416)
Q Consensus       194 ~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~  273 (416)
                      .....     ....||++|+|||++.++. +.++|||||||+|++|++|..||......                   + 
T Consensus       230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------------------~-  283 (681)
T 2pzi_A          230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-------------------G-  283 (681)
T ss_dssp             ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-------------------S-
T ss_pred             hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-------------------c-
Confidence            76543     3357999999999997654 89999999999999999998887542110                   0 


Q ss_pred             cccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCC-HHHHHHHhcc
Q 014904          274 FDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPR-MSQIVRALEG  321 (416)
Q Consensus       274 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt-~~evv~~L~~  321 (416)
                         +.    ...........+..++.+||+.+|.+||+ +.++...|.+
T Consensus       284 ---~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          284 ---LP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             ---CC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ---cc----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence               00    00001122357889999999999999995 6666666654


No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.3e-37  Score=299.62  Aligned_cols=229  Identities=22%  Similarity=0.318  Sum_probs=182.0

Q ss_pred             hhCCCCcC-ceecccCcEEEEEEEe-CCCcEEEEEEeecCCcccHHHHHHHHHHH-HhcCCCcccceEEEEEe----CCe
Q 014904           42 ATDGFSDA-NLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQGEREFQAEVEII-SRVHHKHLVSLVGYYTA----GSQ  114 (416)
Q Consensus        42 ~t~~f~~~-~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~  114 (416)
                      ..++|.+. ++||+|+||.||+|.. .+++.||||+++..     ..+.+|+.++ +.++||||+++++++..    ...
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            44678777 7899999999999996 57899999999642     4667888888 55699999999999987    677


Q ss_pred             EEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECC---CCceEEeeccc
Q 014904          115 RMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDF---KFEAKVADFGL  191 (416)
Q Consensus       115 ~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~---~~~~kl~DFGl  191 (416)
                      .++||||+++++|.+++.......+++..++.++.|++.||.|||+.   +|+||||||+|||++.   ++.+||+|||+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            89999999999999999877666799999999999999999999999   9999999999999998   78899999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhc
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIED  271 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~  271 (416)
                      +....                       +..++.++|||||||++|||++|+.||.........               .
T Consensus       167 a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---------------~  208 (299)
T 3m2w_A          167 AKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------------P  208 (299)
T ss_dssp             CEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------------C
T ss_pred             ccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh---------------H
Confidence            86543                       134678999999999999999999999764321100               0


Q ss_pred             CCcccccCccccCcCC----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 014904          272 GNFDTLVDPKLHNEYN----HNEMARMVACAAACVRHSARRRPRMSQIVRA  318 (416)
Q Consensus       272 ~~~~~~~d~~l~~~~~----~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~  318 (416)
                      .....+....  ...+    ......+.+++.+||+.+|.+||++.|+++.
T Consensus       209 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          209 GMKTRIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             CSCCSSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            0000000000  0111    1224578999999999999999999999963


No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=8e-39  Score=337.70  Aligned_cols=261  Identities=27%  Similarity=0.366  Sum_probs=201.0

Q ss_pred             CCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCC-cccHHHHHHHHHHHHhcCCCcccceEEEEEe------CCeE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGS-GQGEREFQAEVEIISRVHHKHLVSLVGYYTA------GSQR  115 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~  115 (416)
                      ++|.+.+.||+|+||.||+|.+ .+|+.||||++.... ......+.+|+.++.+++||||+++++++..      ....
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6899999999999999999996 468999999987643 3334578999999999999999999998755      6778


Q ss_pred             EEEEEecCCCCHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCc---eEEeeccc
Q 014904          116 MLVYEFVPNNTLEFHLHGKG-RPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFE---AKVADFGL  191 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~---~kl~DFGl  191 (416)
                      ++||||+++++|.+++.... ...+++..++.|+.+++.||+|||+.   +|+||||||+||+++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999997643 23588899999999999999999999   9999999999999987665   89999999


Q ss_pred             ceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhh-
Q 014904          192 AKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIE-  270 (416)
Q Consensus       192 a~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~-  270 (416)
                      +........  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||.....     ...|.......... 
T Consensus       171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~  243 (676)
T 3qa8_A          171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEH  243 (676)
T ss_dssp             CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------
T ss_pred             ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchh
Confidence            987654332  2446799999999999999999999999999999999999999975421     22332211111000 


Q ss_pred             -------cCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHH
Q 014904          271 -------DGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQ  314 (416)
Q Consensus       271 -------~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~e  314 (416)
                             .+.+...................+.+++.+||+.||++||++.|
T Consensus       244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence                   11111000111123344557788999999999999999999987


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.9e-38  Score=318.57  Aligned_cols=242  Identities=14%  Similarity=0.138  Sum_probs=181.9

Q ss_pred             hhCCCCcCceecccCcEEEEEEEe-CCCcEEEEEEeecCCccc---HHHHHHHHHHHHhcCC-Ccc---------cceE-
Q 014904           42 ATDGFSDANLLGQGGFGYVHRGVL-PNGKEVAIKQLKAGSGQG---EREFQAEVEIISRVHH-KHL---------VSLV-  106 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~---~~~~~~E~~~l~~l~h-~ni---------v~l~-  106 (416)
                      .++.|...++||+|+||.||+|.+ .+|+.||||++.......   .+.|.+|+.++..++| +|.         +... 
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            445678889999999999999994 579999999988443222   4678999999999977 321         1111 


Q ss_pred             -----------EEEEe-----CCeEEEEEEecCCCCHHHHhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 014904          107 -----------GYYTA-----GSQRMLVYEFVPNNTLEFHLH-----GKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPK  165 (416)
Q Consensus       107 -----------~~~~~-----~~~~~lV~e~~~~~sL~~~l~-----~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~  165 (416)
                                 .++..     ....+++|++. +++|.+++.     ......+++..++.|+.|++.||+|||+.   +
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~  231 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G  231 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence                       11111     22356777755 788988884     22334688999999999999999999999   9


Q ss_pred             eeeecccCCcEEECCCCceEEeecccceeccCCCcceeecccccccccChhhh----------ccCCCCchhhhHhHHHH
Q 014904          166 IIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYA----------SSGKLTEKSDVFSFGVM  235 (416)
Q Consensus       166 iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~----------~~~~~t~ksDV~SlGvv  235 (416)
                      |+||||||+||||+.++.+||+|||+++.....    .....| +.|+|||++          ....++.++|||||||+
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            999999999999999999999999999865432    344567 999999999          55568899999999999


Q ss_pred             HHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 014904          236 LLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMARMVACAAACVRHSARRRPRMSQI  315 (416)
Q Consensus       236 L~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPt~~ev  315 (416)
                      +|||++|+.||........                   ...+...  ...+    +..+.+++.+||+.+|++||++.++
T Consensus       307 l~elltg~~Pf~~~~~~~~-------------------~~~~~~~--~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~  361 (413)
T 3dzo_A          307 IYWIWCADLPNTDDAALGG-------------------SEWIFRS--CKNI----PQPVRALLEGFLRYPKEDRLLPLQA  361 (413)
T ss_dssp             HHHHHHSSCCCCTTGGGSC-------------------SGGGGSS--CCCC----CHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHCCCCCCCcchhhh-------------------HHHHHhh--cccC----CHHHHHHHHHHccCChhhCcCHHHH
Confidence            9999999999976442110                   0001110  0112    2578999999999999999998887


Q ss_pred             HH
Q 014904          316 VR  317 (416)
Q Consensus       316 v~  317 (416)
                      ++
T Consensus       362 l~  363 (413)
T 3dzo_A          362 ME  363 (413)
T ss_dssp             TT
T ss_pred             Hh
Confidence            53


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=4.1e-37  Score=300.88  Aligned_cols=242  Identities=17%  Similarity=0.190  Sum_probs=187.1

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc--------ccHHHHHHHHHHHHhcC---------CCcccce
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG--------QGEREFQAEVEIISRVH---------HKHLVSL  105 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~l  105 (416)
                      .++|.+.+.||+|+||.||+|.. +|+.||||++.....        ...+.+.+|+.+++.++         |+||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            46788999999999999999998 789999999986532        22367889999998885         8888888


Q ss_pred             EEEEE------------------------------eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 014904          106 VGYYT------------------------------AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGL  155 (416)
Q Consensus       106 ~~~~~------------------------------~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL  155 (416)
                      .+.+.                              .....++||||++++++.+.+..   ..+++..++.|+.|++.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence            77653                              26789999999999976555533   3589999999999999999


Q ss_pred             HHHH-hcCCCCeeeecccCCcEEECCCC--------------------ceEEeecccceeccCCCcceeecccccccccC
Q 014904          156 AYLH-EDCHPKIIHRDIKAANILLDFKF--------------------EAKVADFGLAKIASDVNTHVSTRVMGTFGYLA  214 (416)
Q Consensus       156 ~~LH-~~~~~~iiHrDIkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~Yla  214 (416)
                      +||| +.   +|+||||||+||||+.++                    .+||+|||+++.....      ...||+.|+|
T Consensus       175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a  245 (336)
T 2vuw_A          175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD  245 (336)
T ss_dssp             HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred             HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence            9999 88   999999999999999887                    8999999999876542      2479999999


Q ss_pred             hhhhccCCCCchhhhHhHHHH-HHHHHhCCCCCCCCCcccchhhhhhhhHHhHHhhhcCCcccccCccccCcCCHHHHHH
Q 014904          215 PEYASSGKLTEKSDVFSFGVM-LLELITGRRPVDSTHTFVEDSLVDWARPLLNRAIEDGNFDTLVDPKLHNEYNHNEMAR  293 (416)
Q Consensus       215 PE~~~~~~~t~ksDV~SlGvv-L~elltG~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  293 (416)
                      ||++.+.. +.++|||||+++ .+++++|..||..         ..|................    .............
T Consensus       246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~  311 (336)
T 2vuw_A          246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKT----KCNTPAMKQIKRK  311 (336)
T ss_dssp             SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSS----CCCSHHHHHHHHH
T ss_pred             hhhhcCCC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCc----ccchhhhhhcCHH
Confidence            99998665 999999998777 7778889888732         1222222222111111111    1111223456778


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHH
Q 014904          294 MVACAAACVRHSARRRPRMSQIV  316 (416)
Q Consensus       294 l~~l~~~cl~~~p~~RPt~~evv  316 (416)
                      +.+|+.+||+.+     ++.|++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHH
Confidence            999999999976     888887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96  E-value=3.4e-31  Score=277.17  Aligned_cols=184  Identities=17%  Similarity=0.126  Sum_probs=130.4

Q ss_pred             ecccCcEEEEEEE-eCCCcEEEEEEeecCCc----------ccHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEE
Q 014904           52 LGQGGFGYVHRGV-LPNGKEVAIKQLKAGSG----------QGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        52 LG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  119 (416)
                      ++.|++|.+..+. .-.|+.++||++...-.          ...++|.+|+++|+++ .|+||++++++++++...||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            4556666665544 33588999999975421          1124699999999999 7999999999999999999999


Q ss_pred             EecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCC
Q 014904          120 EFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVN  199 (416)
Q Consensus       120 e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~  199 (416)
                      ||++|++|.++|...+  .++..   .|+.||+.||+|||+.   +||||||||+||||+.++.+||+|||+++......
T Consensus       322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence            9999999999998654  45543   4889999999999999   99999999999999999999999999998765543


Q ss_pred             cceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCC
Q 014904          200 THVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRP  245 (416)
Q Consensus       200 ~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~p  245 (416)
                      .. .+..+||++|+|||++.+ .+..++|+|++|+++++|.++..+
T Consensus       394 ~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          394 SW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             cc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            32 345789999999999874 678899999999998887665443


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94  E-value=9.9e-28  Score=249.53  Aligned_cols=187  Identities=17%  Similarity=0.199  Sum_probs=147.0

Q ss_pred             CCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCccc--------HHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 014904           44 DGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQG--------EREFQAEVEIISRVHHKHLVSLVGYYTAGSQR  115 (416)
Q Consensus        44 ~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  115 (416)
                      ..+...++||+|+||.||+|.. .++.+++|+........        .+.+.+|+.++++++||||+++..++......
T Consensus       336 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~  414 (540)
T 3en9_A          336 KRKIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNK  414 (540)
T ss_dssp             ------------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTT
T ss_pred             ccCCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCcc
Confidence            3345567999999999999954 67889999875533221        23578999999999999999777777788888


Q ss_pred             EEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          116 MLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       116 ~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      +|||||+++++|.+++..          ++.|+.|+++||.|||+.   +|+||||||+|||++.  .+||+|||+++..
T Consensus       415 ~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          415 RIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             EEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             EEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence            999999999999999865          458999999999999999   9999999999999998  9999999999987


Q ss_pred             cCCCcce------eecccccccccChhhhcc--CCCCchhhhHhHHHHHHHHHhCCCCC
Q 014904          196 SDVNTHV------STRVMGTFGYLAPEYASS--GKLTEKSDVFSFGVMLLELITGRRPV  246 (416)
Q Consensus       196 ~~~~~~~------~~~~~gt~~YlaPE~~~~--~~~t~ksDV~SlGvvL~elltG~~pf  246 (416)
                      .......      .....||+.|+|||++..  ..|+..+|+|+..+-.++-+.++.++
T Consensus       480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            6532221      235789999999999976  56788999999999888888777664


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90  E-value=5.1e-24  Score=203.73  Aligned_cols=151  Identities=16%  Similarity=0.110  Sum_probs=120.5

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcc------------------cHHHHHHHHHHHHhcCC
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQ------------------GEREFQAEVEIISRVHH   99 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~------------------~~~~~~~E~~~l~~l~h   99 (416)
                      .+......|.+.+.||+|+||.||+|...+|+.||||+++.....                  ....+.+|+.++++++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            334445566677999999999999999977999999999753221                  2346889999999999 


Q ss_pred             CcccceEEEEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEEC
Q 014904          100 KHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLD  179 (416)
Q Consensus       100 ~niv~l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~  179 (416)
                       | +++.+++.. +..++||||+++++|.+ +..        .....++.|++.||.|||+.   +|+||||||+|||++
T Consensus       163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~  227 (282)
T 1zar_A          163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS  227 (282)
T ss_dssp             -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred             -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE
Confidence             5 666665544 45699999999999988 421        12346999999999999999   999999999999999


Q ss_pred             CCCceEEeecccceeccCCCcceeecccccccccChhhhc
Q 014904          180 FKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYAS  219 (416)
Q Consensus       180 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~  219 (416)
                       ++.+||+|||+++.              +..+.|||++.
T Consensus       228 -~~~vkl~DFG~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          228 -EEGIWIIDFPQSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             -TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred             -CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence             99999999999863              34478899875


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81  E-value=3.5e-20  Score=174.67  Aligned_cols=136  Identities=18%  Similarity=0.151  Sum_probs=106.2

Q ss_pred             CCcCceecccCcEEEEEEEe-CCCcE--EEEEEeecCCcc------------------------cHHHHHHHHHHHHhcC
Q 014904           46 FSDANLLGQGGFGYVHRGVL-PNGKE--VAIKQLKAGSGQ------------------------GEREFQAEVEIISRVH   98 (416)
Q Consensus        46 f~~~~~LG~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~   98 (416)
                      |.+.+.||+|+||.||+|.. .+|+.  ||||+++.....                        ....+..|+.++.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999997 78999  999997643211                        0135788999999998


Q ss_pred             CCcc--cceEEEEEeCCeEEEEEEecCC-C----CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeeec
Q 014904           99 HKHL--VSLVGYYTAGSQRMLVYEFVPN-N----TLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLH-EDCHPKIIHRD  170 (416)
Q Consensus        99 h~ni--v~l~~~~~~~~~~~lV~e~~~~-~----sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH-~~~~~~iiHrD  170 (416)
                      |+++  ..++.+    ...+|||||+.+ +    .|.++...     .++..+..++.|++.+|.||| +.   +|+|||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD  196 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD  196 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence            8864  344432    256899999942 3    67666432     223456789999999999999 77   999999


Q ss_pred             ccCCcEEECCCCceEEeecccceec
Q 014904          171 IKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       171 Ikp~NILl~~~~~~kl~DFGla~~~  195 (416)
                      |||.|||++.  .++|+|||++...
T Consensus       197 lkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          197 LSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCHHHEEEcC--cEEEEECcccccC
Confidence            9999999988  9999999999754


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70  E-value=3e-17  Score=162.52  Aligned_cols=146  Identities=14%  Similarity=0.089  Sum_probs=106.2

Q ss_pred             HHHHHHhhCC---CCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCc-----c---------cHH--------HHHHH
Q 014904           36 YEELARATDG---FSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSG-----Q---------GER--------EFQAE   90 (416)
Q Consensus        36 ~~el~~~t~~---f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----~---------~~~--------~~~~E   90 (416)
                      |--|.+..++   |++.+.||+|+||.||+|...+|+.||||+++....     .         ...        ....|
T Consensus        84 ~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE  163 (397)
T 4gyi_A           84 YLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKE  163 (397)
T ss_dssp             HHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence            3345555555   888999999999999999998999999999864211     0         001        12346


Q ss_pred             HHHHHhcCCCcccceEEEEEeCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeec
Q 014904           91 VEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRD  170 (416)
Q Consensus        91 ~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrD  170 (416)
                      +..|.++++.++....-+....  .+|||||+.+..|..+...        .....++.|++.+|.+||+.   +|||||
T Consensus       164 ~~nL~rL~~~gv~vp~p~~~~~--~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrD  230 (397)
T 4gyi_A          164 FAFMKALYEEGFPVPEPIAQSR--HTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGD  230 (397)
T ss_dssp             HHHHHHHHHTTCSCCCEEEEET--TEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             HHHHHHHHhcCCCCCeeeeccC--ceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCC
Confidence            7777777655543322222222  3699999999888655321        12346789999999999998   999999


Q ss_pred             ccCCcEEECCCCc----------eEEeeccccee
Q 014904          171 IKAANILLDFKFE----------AKVADFGLAKI  194 (416)
Q Consensus       171 Ikp~NILl~~~~~----------~kl~DFGla~~  194 (416)
                      |||.||||++++.          +.|+||+-+-.
T Consensus       231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            9999999988763          89999997654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.44  E-value=5.1e-13  Score=125.06  Aligned_cols=148  Identities=11%  Similarity=0.025  Sum_probs=116.4

Q ss_pred             HHHHhhCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEE
Q 014904           38 ELARATDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGYYTAGSQRM  116 (416)
Q Consensus        38 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  116 (416)
                      .+.....+|.....++.|+.+.||+.... ++.+++|+...........+.+|+.++..+. +..+.++++++.+....+
T Consensus         8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A            8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence            34566778988888898889999999864 6899999987532122346889999999985 677889999999999999


Q ss_pred             EEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 014904          117 LVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC----------------------------------  162 (416)
Q Consensus       117 lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~----------------------------------  162 (416)
                      +|||+++|.+|...+..       ......++.+++++|+.||+..                                  
T Consensus        87 lv~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred             EEEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence            99999999999876421       1123468889999999999810                                  


Q ss_pred             ----------------------CCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          163 ----------------------HPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       163 ----------------------~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                                            .+.++|+|+++.|||++.+..+.|+||+.+.
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                  1359999999999999876556799998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.30  E-value=4.3e-12  Score=117.81  Aligned_cols=139  Identities=17%  Similarity=0.084  Sum_probs=101.8

Q ss_pred             hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCc--ccceEEEEEeCCeEEEEEE
Q 014904           43 TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH--LVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        43 t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e  120 (416)
                      ..++.+..+.+.|..+.||+....+|+.++||+.....   ...+..|+.++..+.+.+  +.++++++..++..++|||
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            34555433333455699999987778889999976542   235778999999986544  4568888888788999999


Q ss_pred             ecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 014904          121 FVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC--------------------------------------  162 (416)
Q Consensus       121 ~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~--------------------------------------  162 (416)
                      |++|.+|.  ...     ..   ...++.++++.|+.||...                                      
T Consensus        96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (264)
T 1nd4_A           96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  165 (264)
T ss_dssp             CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence            99998884  211     12   2356777888888888642                                      


Q ss_pred             -----------------CCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          163 -----------------HPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       163 -----------------~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                                       ...++|+|++|.|||++.+..+.|+||+.+..
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                             12399999999999998776667999998753


No 258
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.12  E-value=6.1e-11  Score=113.62  Aligned_cols=185  Identities=19%  Similarity=0.210  Sum_probs=123.0

Q ss_pred             CceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CCc--ccceEEEEEeCC---eEEEEEEec
Q 014904           49 ANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKH--LVSLVGYYTAGS---QRMLVYEFV  122 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~e~~  122 (416)
                      .+.|+.|....||+..    ..+++|+....  .....+..|+.++..+. +..  +.+++.......   ..++||+++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4578999999999853    56899986532  33467889999999884 333  345555443332   347899999


Q ss_pred             CCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 014904          123 PNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED-----------------------------------------  161 (416)
Q Consensus       123 ~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-----------------------------------------  161 (416)
                      +|..+......    .++...+..++.+++..|+.||..                                         
T Consensus        99 ~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A           99 KGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            99888653321    367777788888888888888861                                         


Q ss_pred             --------------CCCCeeeecccCCcEEECC--CCceEEeecccceeccCCCcceee--------------ccccccc
Q 014904          162 --------------CHPKIIHRDIKAANILLDF--KFEAKVADFGLAKIASDVNTHVST--------------RVMGTFG  211 (416)
Q Consensus       162 --------------~~~~iiHrDIkp~NILl~~--~~~~kl~DFGla~~~~~~~~~~~~--------------~~~gt~~  211 (416)
                                    ..+.++|+|+++.||+++.  +..+.|+||+.+...... .....              .+....+
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~Y~  253 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNHYK  253 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHHcC
Confidence                          1245899999999999988  456789999998754221 10000              0111112


Q ss_pred             ccC-hhhhccCCCCchhhhHhHHHHHHHHHhCCCCC
Q 014904          212 YLA-PEYASSGKLTEKSDVFSFGVMLLELITGRRPV  246 (416)
Q Consensus       212 Yla-PE~~~~~~~t~ksDV~SlGvvL~elltG~~pf  246 (416)
                      ... |++...  .....+.|+++++++.+.+|..+|
T Consensus       254 ~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          254 HKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            222 332221  122368999999999999997764


No 259
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.10  E-value=2.9e-10  Score=111.44  Aligned_cols=143  Identities=15%  Similarity=0.169  Sum_probs=107.5

Q ss_pred             CcCceecccCcEEEEEEEeCCCcEEEEEEee--cCCc-ccHHHHHHHHHHHHhcCC--CcccceEEEEEeC---CeEEEE
Q 014904           47 SDANLLGQGGFGYVHRGVLPNGKEVAIKQLK--AGSG-QGEREFQAEVEIISRVHH--KHLVSLVGYYTAG---SQRMLV  118 (416)
Q Consensus        47 ~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~--~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~---~~~~lV  118 (416)
                      ...+.|+.|.++.||+....+ ..+++|+..  .... .....+..|+.+++.+..  ..+.+++.++.+.   +..++|
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             ceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            346688999999999988754 678888876  3321 223568889999999974  5578899988776   447899


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC------------------------------------  162 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~------------------------------------  162 (416)
                      |||++|..+.+..    ...++...+..++.++++.|+.||...                                    
T Consensus       120 me~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          120 MEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             EECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            9999998774321    124678888899999999999999731                                    


Q ss_pred             -------------------CCCeeeecccCCcEEECCCCc--eEEeeccccee
Q 014904          163 -------------------HPKIIHRDIKAANILLDFKFE--AKVADFGLAKI  194 (416)
Q Consensus       163 -------------------~~~iiHrDIkp~NILl~~~~~--~kl~DFGla~~  194 (416)
                                         .+.++|+|+++.|||++.++.  +.|+||+.+..
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                               257999999999999987753  68999999864


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.80  E-value=4.1e-08  Score=94.63  Aligned_cols=144  Identities=17%  Similarity=0.200  Sum_probs=105.6

Q ss_pred             HHHHhhC---CCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCC----CcccceEEEEE
Q 014904           38 ELARATD---GFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHH----KHLVSLVGYYT  110 (416)
Q Consensus        38 el~~~t~---~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~  110 (416)
                      .|....+   .....+.|+.|....||+.    |+.+++|+....  .....+..|+.++..+.+    ..+.+++++  
T Consensus        28 ~i~~~~g~~~~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--   99 (320)
T 3r70_A           28 EIYEHLNKQIKINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ--   99 (320)
T ss_dssp             HHHHHHHHHSCCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--
T ss_pred             HHHHHcCCCcceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec--
Confidence            3444454   6667788999999999997    677899986432  223468899999999866    223455554  


Q ss_pred             eCCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------
Q 014904          111 AGSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCH---------------------------  163 (416)
Q Consensus       111 ~~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~---------------------------  163 (416)
                        +..++||||++|.++......    .++...+..++.++++.|+.||+...                           
T Consensus       100 --~~~~lvme~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (320)
T 3r70_A          100 --SDRFNIMKYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS  173 (320)
T ss_dssp             --CSSCEEEECCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred             --CCcEEEEeecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence              467899999999988643321    35666777788888888888885422                           


Q ss_pred             ---------------------------------CCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          164 ---------------------------------PKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       164 ---------------------------------~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                                                       +.++|+|+++.|||++.+..+.|+||+.+...
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                             23599999999999998666799999998654


No 261
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.75  E-value=4.7e-08  Score=96.11  Aligned_cols=163  Identities=14%  Similarity=0.139  Sum_probs=97.3

Q ss_pred             CCCCccccCHHHHHHh----hCCCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCc-
Q 014904           27 LGFSKSTFTYEELARA----TDGFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH-  101 (416)
Q Consensus        27 ~~~~~~~f~~~el~~~----t~~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-  101 (416)
                      +|+.+..++.+.|...    .......+.|+.|....+|+... +++.++||+....     ..+..|+.++..+.... 
T Consensus        20 ~~m~~~~~~~~~l~~~L~~~~~~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gv   93 (362)
T 3ovc_A           20 QGMKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAAL   93 (362)
T ss_dssp             ---------CHHHHHHHHHHSSCCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSS
T ss_pred             cCCCCCCCCHHHHHHHHHHhcCCCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCC
Confidence            4555556666655443    23344566788899999999886 5788999987532     25888999999987544 


Q ss_pred             -ccceEEEEEeC-CeEEEEEEecCCCCHHHH------------------hhcCCCC---------------CCCHHHHH-
Q 014904          102 -LVSLVGYYTAG-SQRMLVYEFVPNNTLEFH------------------LHGKGRP---------------TMDWLTRL-  145 (416)
Q Consensus       102 -iv~l~~~~~~~-~~~~lV~e~~~~~sL~~~------------------l~~~~~~---------------~l~~~~~~-  145 (416)
                       +.+++.++... ...++|||+++|..+...                  ||.....               .-.|...+ 
T Consensus        94 pvP~vl~~~~~~~g~~~lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~  173 (362)
T 3ovc_A           94 PIPEVLDIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFIC  173 (362)
T ss_dssp             CCCCEEEEEESSSSCEEEEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHH
T ss_pred             CCceEEEeccCCCCCeEEEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHH
Confidence             46778777764 568999999997655311                  1111000               00111110 


Q ss_pred             --------------------HHHHHHHHHHHHHHhc-CCCCeeeecccCCcEEECCCCceEEeecccceec
Q 014904          146 --------------------KIALGSAKGLAYLHED-CHPKIIHRDIKAANILLDFKFEAKVADFGLAKIA  195 (416)
Q Consensus       146 --------------------~i~~~ia~aL~~LH~~-~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~  195 (416)
                                          .....+...+.++... ..+.++|+|+++.||+++.+..+.|+||+.+...
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g  244 (362)
T 3ovc_A          174 AIADPHVYHWQTVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG  244 (362)
T ss_dssp             GGGCTTTCCHHHHCCTTTHHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence                                1111122222333211 1246899999999999987777889999998754


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.72  E-value=5.1e-08  Score=92.81  Aligned_cols=141  Identities=22%  Similarity=0.197  Sum_probs=94.7

Q ss_pred             CcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCC---cccceEEEEEeCCeEEEEEEecC
Q 014904           47 SDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHK---HLVSLVGYYTAGSQRMLVYEFVP  123 (416)
Q Consensus        47 ~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~~~  123 (416)
                      ...+.|+.|.++.||++...+|+.++||+...........|..|+..|+.+.+.   .+.+++++.    ..++||||++
T Consensus        18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~   93 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD   93 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred             cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence            446789999999999999888999999997644333345789999999999875   467777763    3689999999


Q ss_pred             CCCHH--------H---HhhcCCCC-------------------CCCHHHHHH---H-----------------HHHHHH
Q 014904          124 NNTLE--------F---HLHGKGRP-------------------TMDWLTRLK---I-----------------ALGSAK  153 (416)
Q Consensus       124 ~~sL~--------~---~l~~~~~~-------------------~l~~~~~~~---i-----------------~~~ia~  153 (416)
                      +..+.        .   .||.....                   .-+|...+.   +                 ...+-+
T Consensus        94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~  173 (288)
T 3d1u_A           94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK  173 (288)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred             cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence            88642        1   12322110                   023432210   0                 111112


Q ss_pred             HHHHHHh----cCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          154 GLAYLHE----DCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       154 aL~~LH~----~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      .+..|..    ...+.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus       174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~  215 (288)
T 3d1u_A          174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH  215 (288)
T ss_dssp             HHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred             HHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence            2333332    23567999999999999987 46889999 654


No 263
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.64  E-value=3.6e-07  Score=87.50  Aligned_cols=137  Identities=20%  Similarity=0.235  Sum_probs=95.0

Q ss_pred             CceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCC---cccceEEEEE-eCCeEEEEEEecCC
Q 014904           49 ANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHK---HLVSLVGYYT-AGSQRMLVYEFVPN  124 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~~~  124 (416)
                      .+.++.|....||+.    |+.++||+..  .......+..|+.++..+.+.   .+.+++.++. ..+..++||++++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            346778888899987    5778999853  223345788999999999753   3567777775 34567899999999


Q ss_pred             CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 014904          125 NTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED-------------------------------------------  161 (416)
Q Consensus       125 ~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-------------------------------------------  161 (416)
                      ..+....-.    .++...+..++.++++.|+.||..                                           
T Consensus        98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            888753211    234444555555555555555542                                           


Q ss_pred             --------------CCCCeeeecccCCcEEECC---CCc-eEEeecccceec
Q 014904          162 --------------CHPKIIHRDIKAANILLDF---KFE-AKVADFGLAKIA  195 (416)
Q Consensus       162 --------------~~~~iiHrDIkp~NILl~~---~~~-~kl~DFGla~~~  195 (416)
                                    ..+.++|+|+++.||+++.   ++. +.|+||+.+...
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                          2335799999999999987   455 489999987653


No 264
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.55  E-value=5.7e-07  Score=83.90  Aligned_cols=143  Identities=18%  Similarity=0.103  Sum_probs=99.4

Q ss_pred             hhCCCCcCceecccCcE-EEEEEEeC-CCcEEEEEEeecCCcccHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEE
Q 014904           42 ATDGFSDANLLGQGGFG-YVHRGVLP-NGKEVAIKQLKAGSGQGEREFQAEVEIISRVH-HKHLVSLVGYYTAGSQRMLV  118 (416)
Q Consensus        42 ~t~~f~~~~~LG~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV  118 (416)
                      ...+|+. ..+..|..+ .||+.... ++..++||+-...   ....+..|..+|+.+. +--+.+++.++.+.+..++|
T Consensus        23 ~l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lv   98 (272)
T 4gkh_A           23 DLYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLL   98 (272)
T ss_dssp             HHTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             cccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEE
Confidence            3344543 234445444 68988754 5678999986643   2457888999999884 33467889999999999999


Q ss_pred             EEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 014904          119 YEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHED-------------------------------------  161 (416)
Q Consensus       119 ~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-------------------------------------  161 (416)
                      ||++++.++.+......      .....++.+++..|+.||..                                     
T Consensus        99 me~l~G~~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (272)
T 4gkh_A           99 TTAIPGKTAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN  172 (272)
T ss_dssp             EECCCSEEHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred             EEeeCCccccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence            99999988876553211      12234555666666666641                                     


Q ss_pred             ------------------CCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          162 ------------------CHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       162 ------------------~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                                        ..+.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus       173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                              112379999999999999877677999998754


No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.45  E-value=3.2e-07  Score=89.34  Aligned_cols=80  Identities=10%  Similarity=0.017  Sum_probs=55.9

Q ss_pred             Ccee-cccCcEEEEEEEeC-------CCcEEEEEEeecCC---cccHHHHHHHHHHHHhcCC---CcccceEEEEEeC--
Q 014904           49 ANLL-GQGGFGYVHRGVLP-------NGKEVAIKQLKAGS---GQGEREFQAEVEIISRVHH---KHLVSLVGYYTAG--  112 (416)
Q Consensus        49 ~~~L-G~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~--  112 (416)
                      .+.| +.|....+|+....       +++.+++|+.....   ......+..|+.++..+..   -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3567 77888899988764       26789999865432   1112456788888888843   3567788887665  


Q ss_pred             -CeEEEEEEecCCCCHH
Q 014904          113 -SQRMLVYEFVPNNTLE  128 (416)
Q Consensus       113 -~~~~lV~e~~~~~sL~  128 (416)
                       ...++|||+++|..+.
T Consensus       105 ~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TSSCEEEEECCCCBCCC
T ss_pred             cCCceEEEEecCCCChh
Confidence             3568999999987654


No 266
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.23  E-value=1e-05  Score=80.01  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=49.9

Q ss_pred             CceecccCcEEEEEEEeC-CCcEEEEEEeecCCc-------ccHHHHHHHHHHHHhcCC--Cc-ccceEEEEEeCCeEEE
Q 014904           49 ANLLGQGGFGYVHRGVLP-NGKEVAIKQLKAGSG-------QGEREFQAEVEIISRVHH--KH-LVSLVGYYTAGSQRML  117 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l  117 (416)
                      .+.||.|..+.||++... +++.++||.......       .....+..|++++..+..  +. +.+++.+  +....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            567999999999999754 568899998653221       122356778888888742  43 3455544  3455689


Q ss_pred             EEEecCCC
Q 014904          118 VYEFVPNN  125 (416)
Q Consensus       118 V~e~~~~~  125 (416)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999763


No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.20  E-value=7.5e-06  Score=78.59  Aligned_cols=139  Identities=16%  Similarity=0.225  Sum_probs=80.6

Q ss_pred             ceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCC--CcccceEE------EEEeCCeEEEEEEe
Q 014904           50 NLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHH--KHLVSLVG------YYTAGSQRMLVYEF  121 (416)
Q Consensus        50 ~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lV~e~  121 (416)
                      ..|+.|..+.||+....+| .+++|+....    ..++..|+.++..+..  -.+.+++.      +....+..++|++|
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            3465566889999987555 5899998752    2344456666665531  12333332      12346778999999


Q ss_pred             cCCCCHH--------------HHhhc--C-C--C-------CCCCHHHHH------------------------------
Q 014904          122 VPNNTLE--------------FHLHG--K-G--R-------PTMDWLTRL------------------------------  145 (416)
Q Consensus       122 ~~~~sL~--------------~~l~~--~-~--~-------~~l~~~~~~------------------------------  145 (416)
                      ++|..+.              ..+|.  . .  .       ....|...+                              
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9986542              11221  1 0  0       012343211                              


Q ss_pred             -HHHHHHHHHHHHHHh----------cCCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          146 -KIALGSAKGLAYLHE----------DCHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       146 -~i~~~ia~aL~~LH~----------~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                       .+...+..++.+|++          .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence             011123345666663          124589999999999999888889999999764


No 268
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.03  E-value=4e-05  Score=73.57  Aligned_cols=138  Identities=15%  Similarity=0.126  Sum_probs=93.1

Q ss_pred             cCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcC---CCcccceEEEEEeCCeEEEEEEecCC
Q 014904           48 DANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVH---HKHLVSLVGYYTAGSQRMLVYEFVPN  124 (416)
Q Consensus        48 ~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~~  124 (416)
                      ..+.|+.|....+|+... +++.++||+....   ....+..|+..|+.+.   ...+.+++.++......++|||++++
T Consensus        40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            345789999999999886 5678999987643   3457889999998884   35678899998888889999999998


Q ss_pred             CCHH--------H---HhhcCCC-C-------------------CCCHHHHH---HHH--HHH-----------HHHHH-
Q 014904          125 NTLE--------F---HLHGKGR-P-------------------TMDWLTRL---KIA--LGS-----------AKGLA-  156 (416)
Q Consensus       125 ~sL~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~--~~i-----------a~aL~-  156 (416)
                      ..+.        .   .||.... .                   .-+|...+   ++.  .+.           ...++ 
T Consensus       116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~  195 (312)
T 3jr1_A          116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI  195 (312)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence            7541        1   2232211 0                   12454322   111  111           11222 


Q ss_pred             ---HHHh-cCCCCeeeecccCCcEEECCCCceEEeecc
Q 014904          157 ---YLHE-DCHPKIIHRDIKAANILLDFKFEAKVADFG  190 (416)
Q Consensus       157 ---~LH~-~~~~~iiHrDIkp~NILl~~~~~~kl~DFG  190 (416)
                         .|.. ...+.++|+|+.+.||+++.++ +.|+||.
T Consensus       196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence               2321 2256799999999999999887 8899974


No 269
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.94  E-value=4.2e-05  Score=72.12  Aligned_cols=79  Identities=18%  Similarity=0.193  Sum_probs=58.5

Q ss_pred             CCCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCC---cccceEEEEEeCCeEEEEEEe
Q 014904           45 GFSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHK---HLVSLVGYYTAGSQRMLVYEF  121 (416)
Q Consensus        45 ~f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~  121 (416)
                      ....+..+|.|..+.||+..+.+|+.|+||+...........|..|+..|+.+.-.   .+.++++.  ..  .++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEe
Confidence            45556789999999999999999999999987655544445688999999988532   23455543  22  3689999


Q ss_pred             cCCCCH
Q 014904          122 VPNNTL  127 (416)
Q Consensus       122 ~~~~sL  127 (416)
                      +.+...
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            987643


No 270
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.91  E-value=6.9e-05  Score=71.52  Aligned_cols=158  Identities=11%  Similarity=0.059  Sum_probs=92.7

Q ss_pred             ccCHHHHHHhhCCCCcC-----ceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCc--ccce
Q 014904           33 TFTYEELARATDGFSDA-----NLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH--LVSL  105 (416)
Q Consensus        33 ~f~~~el~~~t~~f~~~-----~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l  105 (416)
                      .++-+++......|...     +.|+.|....+|+....+| .+++|+.....  ....+..|+.++..+...+  +.++
T Consensus         6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~   82 (322)
T 2ppq_A            6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   82 (322)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            46778888888888652     3466677789999987655 68899887521  1235566777777764222  2233


Q ss_pred             EE------EEEeCCeEEEEEEecCCCCHHH--------------HhhcC----CCCC------CCHHHHHHH--------
Q 014904          106 VG------YYTAGSQRMLVYEFVPNNTLEF--------------HLHGK----GRPT------MDWLTRLKI--------  147 (416)
Q Consensus       106 ~~------~~~~~~~~~lV~e~~~~~sL~~--------------~l~~~----~~~~------l~~~~~~~i--------  147 (416)
                      +.      +....+..++|++|++|..+..              .+|..    ....      ..|...+.-        
T Consensus        83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  162 (322)
T 2ppq_A           83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  162 (322)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence            31      1223466789999999865311              11211    1110      123321110        


Q ss_pred             ----HHHHHHHHHHHHhc----CCCCeeeecccCCcEEECCCCceEEeecccce
Q 014904          148 ----ALGSAKGLAYLHED----CHPKIIHRDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       148 ----~~~ia~aL~~LH~~----~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                          ...+...+..+++.    ....++|+|+++.|||++.+..+.|+||+.+.
T Consensus       163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                11234455666542    13479999999999999877556899998764


No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.88  E-value=6.5e-05  Score=74.89  Aligned_cols=77  Identities=12%  Similarity=0.154  Sum_probs=47.5

Q ss_pred             CCCeeeecccCCcEEECCCCceEEeecccceeccCCCcceeecccc--cccccChhhhccC---CCCchhhhHhHHHHHH
Q 014904          163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG--TFGYLAPEYASSG---KLTEKSDVFSFGVMLL  237 (416)
Q Consensus       163 ~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~g--t~~YlaPE~~~~~---~~t~ksDV~SlGvvL~  237 (416)
                      .+.++|+|+++.|||++.++ ++|+||+.+........ .. ....  ...|++|++....   .-....++..+...+|
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IG-AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HH-HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HH-HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            45799999999999998876 99999998875432100 00 0111  1345666655311   1122355567777777


Q ss_pred             HHHhC
Q 014904          238 ELITG  242 (416)
Q Consensus       238 elltG  242 (416)
                      +.+++
T Consensus       308 ~~y~~  312 (420)
T 2pyw_A          308 NLFNK  312 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77764


No 272
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.74  E-value=0.00061  Score=65.00  Aligned_cols=159  Identities=15%  Similarity=0.107  Sum_probs=93.9

Q ss_pred             cccCHHHHHHhhCCCCc-----CceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCc--ccc
Q 014904           32 STFTYEELARATDGFSD-----ANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH--LVS  104 (416)
Q Consensus        32 ~~f~~~el~~~t~~f~~-----~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~  104 (416)
                      ...+-+++..+...|..     ...|+ |....||+....+|+.+++|+..... .....+..|+.++..+....  +++
T Consensus         9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~   86 (328)
T 1zyl_A            9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA   86 (328)
T ss_dssp             CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred             CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence            34566677766665533     23566 77789999887778789999987432 23456777888888874222  334


Q ss_pred             eEEE-----EEeCCeEEEEEEecCCCCHH-----H------H---hhc----CC---CCCCCHHHH----HHH-------
Q 014904          105 LVGY-----YTAGSQRMLVYEFVPNNTLE-----F------H---LHG----KG---RPTMDWLTR----LKI-------  147 (416)
Q Consensus       105 l~~~-----~~~~~~~~lV~e~~~~~sL~-----~------~---l~~----~~---~~~l~~~~~----~~i-------  147 (416)
                      ++..     ....+..++|+++++|..+.     .      .   +|.    ..   ....++...    ..+       
T Consensus        87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  166 (328)
T 1zyl_A           87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI  166 (328)
T ss_dssp             CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred             eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence            4332     22355678899999875431     1      0   111    00   112232211    000       


Q ss_pred             --------HHHHHHHHHHHHhc----CCCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          148 --------ALGSAKGLAYLHED----CHPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       148 --------~~~ia~aL~~LH~~----~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                              ...+...+..+...    ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                    01111223333322    234689999999999998 4 899999987653


No 273
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.50  E-value=0.00038  Score=65.91  Aligned_cols=140  Identities=12%  Similarity=0.117  Sum_probs=77.3

Q ss_pred             CCcCceecccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcc-cceEEEEEeCCeEEEEEEec-C
Q 014904           46 FSDANLLGQGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHL-VSLVGYYTAGSQRMLVYEFV-P  123 (416)
Q Consensus        46 f~~~~~LG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~  123 (416)
                      +.-.+.|+.|....+|+.     +.+++|+........ .....|+.++..+...++ .+++.+  +...-++|+||+ +
T Consensus        20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~   91 (301)
T 3dxq_A           20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG   91 (301)
T ss_dssp             CCSCEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred             ccceeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence            334678888989999998     568999876532111 123467877777753333 455554  333456899999 6


Q ss_pred             CCCHHH------------------HhhcCCCC---CCCHHHH-HHHHH--------------HHHHHHHHHH----h-cC
Q 014904          124 NNTLEF------------------HLHGKGRP---TMDWLTR-LKIAL--------------GSAKGLAYLH----E-DC  162 (416)
Q Consensus       124 ~~sL~~------------------~l~~~~~~---~l~~~~~-~~i~~--------------~ia~aL~~LH----~-~~  162 (416)
                      +.++..                  .+|.....   ....... ..+..              .+...+..|.    . ..
T Consensus        92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~  171 (301)
T 3dxq_A           92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL  171 (301)
T ss_dssp             CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred             CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence            654421                  11211110   0111111 11100              0111111111    1 12


Q ss_pred             CCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       163 ~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      ...++|+|+.+.||+ ..++.+.|+||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            345899999999999 5566789999988764


No 274
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.49  E-value=0.00021  Score=71.58  Aligned_cols=73  Identities=19%  Similarity=0.278  Sum_probs=49.7

Q ss_pred             CceecccCcEEEEEEEeCC--------CcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcc-cceEEEEEeCCeEEEEE
Q 014904           49 ANLLGQGGFGYVHRGVLPN--------GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHL-VSLVGYYTAGSQRMLVY  119 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~  119 (416)
                      .+.|+.|--..||+....+        ++.+++|+....  .....+..|+.++..+...++ .++++.+.+    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4567777789999998753        578999988432  122455679999888854444 567765532    2899


Q ss_pred             EecCCCCH
Q 014904          120 EFVPNNTL  127 (416)
Q Consensus       120 e~~~~~sL  127 (416)
                      ||++|.++
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986443


No 275
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.49  E-value=0.00067  Score=65.03  Aligned_cols=141  Identities=17%  Similarity=0.133  Sum_probs=74.2

Q ss_pred             ceecccCcEE-EEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCC--CcccceEEEEEeCCeEEEEEEecCCCC
Q 014904           50 NLLGQGGFGY-VHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHH--KHLVSLVGYYTAGSQRMLVYEFVPNNT  126 (416)
Q Consensus        50 ~~LG~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~~s  126 (416)
                      +.|+.|.... +|+....+++.+++|.......   ..+..|+.++..+..  -.+.+++.+.....  ++|||++.+..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence            4565554444 6676654477788886554321   234456777776642  23556776643333  68999997766


Q ss_pred             HHHHhhc---------------------CCC---CCCCHHHHH---------H-----------HHHHHHHHHHHHHh--
Q 014904          127 LEFHLHG---------------------KGR---PTMDWLTRL---------K-----------IALGSAKGLAYLHE--  160 (416)
Q Consensus       127 L~~~l~~---------------------~~~---~~l~~~~~~---------~-----------i~~~ia~aL~~LH~--  160 (416)
                      +...+..                     ...   +.++.....         .           ....+...+..|.+  
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            6443321                     110   111111000         0           00011222333321  


Q ss_pred             -cCCCCeeeecccCCcEEECCC----CceEEeecccceec
Q 014904          161 -DCHPKIIHRDIKAANILLDFK----FEAKVADFGLAKIA  195 (416)
Q Consensus       161 -~~~~~iiHrDIkp~NILl~~~----~~~kl~DFGla~~~  195 (416)
                       .....++|+|+.+.|||++.+    ..+.|+||+.+...
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence             124479999999999999874    67899999988653


No 276
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.32  E-value=0.00067  Score=66.75  Aligned_cols=139  Identities=19%  Similarity=0.225  Sum_probs=81.1

Q ss_pred             ceecccCcEEEEEEEeC--------CCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCc-ccceEEEEEeCCeEEEEEE
Q 014904           50 NLLGQGGFGYVHRGVLP--------NGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKH-LVSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        50 ~~LG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~e  120 (416)
                      +.|..|--..+|+....        +++.+++|+.... ......+.+|..+++.+.-.+ ..++++++.+    .+|+|
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            45655666789998864        2578999986432 223456678999998885333 3566666543    28999


Q ss_pred             ecCCCCHHH-----------------HhhcCC---CCCCC--HHHHHHHHHHHH-------------------HHHHHHH
Q 014904          121 FVPNNTLEF-----------------HLHGKG---RPTMD--WLTRLKIALGSA-------------------KGLAYLH  159 (416)
Q Consensus       121 ~~~~~sL~~-----------------~l~~~~---~~~l~--~~~~~~i~~~ia-------------------~aL~~LH  159 (416)
                      |++|..|..                 -||...   .....  |.+..++..++.                   ..+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            999865421                 012211   11122  334444443321                   1233333


Q ss_pred             h----c-CCCCeeeecccCCcEEECCC----CceEEeecccce
Q 014904          160 E----D-CHPKIIHRDIKAANILLDFK----FEAKVADFGLAK  193 (416)
Q Consensus       160 ~----~-~~~~iiHrDIkp~NILl~~~----~~~kl~DFGla~  193 (416)
                      +    . ....++|+|+.+.|||++.+    +.+.|+||..+.
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            2    1 23368999999999999876    689999998875


No 277
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.31  E-value=0.00078  Score=68.01  Aligned_cols=73  Identities=12%  Similarity=0.113  Sum_probs=46.9

Q ss_pred             ceecccCcEEEEEEEeCC-CcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcc-cceEEEEEeCCeEEEEEEecCCCCH
Q 014904           50 NLLGQGGFGYVHRGVLPN-GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHL-VSLVGYYTAGSQRMLVYEFVPNNTL  127 (416)
Q Consensus        50 ~~LG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~~sL  127 (416)
                      +.|+.|--..+|+....+ +..+++|+........ -....|+.++..+...++ .++++++.  +  .+|+||++|..|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence            456667778999988765 5789999875432111 112578889998875555 46777662  2  259999987543


No 278
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.08  E-value=0.0039  Score=60.11  Aligned_cols=32  Identities=22%  Similarity=0.308  Sum_probs=27.8

Q ss_pred             CCCeeeecccCCcEEECCCCceEEeeccccee
Q 014904          163 HPKIIHRDIKAANILLDFKFEAKVADFGLAKI  194 (416)
Q Consensus       163 ~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~  194 (416)
                      ...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            34699999999999999888899999987754


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.07  E-value=0.001  Score=64.84  Aligned_cols=73  Identities=10%  Similarity=0.068  Sum_probs=44.0

Q ss_pred             CceecccCcEEEEEEEeCC---------CcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcc-cceEEEEEeCCeEEEE
Q 014904           49 ANLLGQGGFGYVHRGVLPN---------GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHL-VSLVGYYTAGSQRMLV  118 (416)
Q Consensus        49 ~~~LG~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV  118 (416)
                      ...|+.|-...+|+....+         ++.+++|+....... ......|..++..+...++ .++++.+  .  -++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence            3466777778999988654         268899987643211 1123578888888754343 4666544  2  2689


Q ss_pred             EEecCCCC
Q 014904          119 YEFVPNNT  126 (416)
Q Consensus       119 ~e~~~~~s  126 (416)
                      ++|++|..
T Consensus       113 ~e~i~G~~  120 (369)
T 3c5i_A          113 EEWLYGDP  120 (369)
T ss_dssp             EECCCSEE
T ss_pred             EEEecCCc
Confidence            99998754


No 280
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.88  E-value=0.0048  Score=55.56  Aligned_cols=99  Identities=15%  Similarity=0.070  Sum_probs=65.5

Q ss_pred             CCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcEEECCCCceEEeecccceeccCCCcceee
Q 014904          125 NTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDVNTHVST  204 (416)
Q Consensus       125 ~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~  204 (416)
                      -+|.++|...+. +++..++|.++.|.+++|.-+-.... . ..+=+.|..|+|..+|.+-+.+ ..+.           
T Consensus        33 vSL~eIL~~~~~-PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------   97 (229)
T 2yle_A           33 LSLEEILRLYNQ-PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-----------   97 (229)
T ss_dssp             EEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred             ccHHHHHHHcCC-CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence            378898886665 79999999999999998877632111 1 1233457999999999887753 1110           


Q ss_pred             cccccccccChhhhccCCCCchhhhHhHHHHHHHHHh
Q 014904          205 RVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELIT  241 (416)
Q Consensus       205 ~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~ellt  241 (416)
                        .....+.+||... ...+.+.=|||||++||.-+-
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence              0122356888764 355789999999999998885


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.62  E-value=0.0044  Score=61.31  Aligned_cols=139  Identities=19%  Similarity=0.214  Sum_probs=79.2

Q ss_pred             eecccCcEEEEEEEeCC--------CcEEEEEEeecCCcc-----------cH-H------HHHHHHHHHHhcCCCc-cc
Q 014904           51 LLGQGGFGYVHRGVLPN--------GKEVAIKQLKAGSGQ-----------GE-R------EFQAEVEIISRVHHKH-LV  103 (416)
Q Consensus        51 ~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~-----------~~-~------~~~~E~~~l~~l~h~n-iv  103 (416)
                      .|..|--..+|+...++        ++.|++++.-.....           .+ +      .+..|..++..+...+ ..
T Consensus        59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P  138 (401)
T 3f2s_A           59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP  138 (401)
T ss_dssp             EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred             EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence            44445556899988754        378999987653211           01 1      1234888888885433 45


Q ss_pred             ceEEEEEeCCeEEEEEEecCCCCHHH--H---------------hhcCC---CCCCC--HHHHHHHHHHHH---------
Q 014904          104 SLVGYYTAGSQRMLVYEFVPNNTLEF--H---------------LHGKG---RPTMD--WLTRLKIALGSA---------  152 (416)
Q Consensus       104 ~l~~~~~~~~~~~lV~e~~~~~sL~~--~---------------l~~~~---~~~l~--~~~~~~i~~~ia---------  152 (416)
                      ++++++.++    +|+||+++.+|..  +               +|...   .....  |....++..++.         
T Consensus       139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~  214 (401)
T 3f2s_A          139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR  214 (401)
T ss_dssp             CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred             eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence            677766432    8999999755421  1               12211   11122  223333332211         


Q ss_pred             -------------HHHHH----HHhc-CCCCeeeecccCCcEEECCC------CceEEeecccce
Q 014904          153 -------------KGLAY----LHED-CHPKIIHRDIKAANILLDFK------FEAKVADFGLAK  193 (416)
Q Consensus       153 -------------~aL~~----LH~~-~~~~iiHrDIkp~NILl~~~------~~~kl~DFGla~  193 (416)
                                   .-+..    |... ....++|+|+.+.|||++.+      +.+.|+||..+.
T Consensus       215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence                         12222    2222 23358999999999999876      789999998764


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.13  E-value=0.053  Score=53.91  Aligned_cols=73  Identities=10%  Similarity=0.151  Sum_probs=46.0

Q ss_pred             ceecccCcEEEEEEEeCC--------CcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcc-cceEEEEEeCCeEEEEEE
Q 014904           50 NLLGQGGFGYVHRGVLPN--------GKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHL-VSLVGYYTAGSQRMLVYE  120 (416)
Q Consensus        50 ~~LG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e  120 (416)
                      +.|..|--..+|+....+        ++.+++|+....... .-...+|..+++.+.-.++ .++++.+  .  -++|++
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence            456556667899988753        588999987543211 1123567888887753333 4566533  2  268999


Q ss_pred             ecCCCCH
Q 014904          121 FVPNNTL  127 (416)
Q Consensus       121 ~~~~~sL  127 (416)
                      |++|..|
T Consensus       151 fI~G~~l  157 (424)
T 3mes_A          151 FIDGEPL  157 (424)
T ss_dssp             CCCSEEC
T ss_pred             EeCCccC
Confidence            9998653


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.65  E-value=0.29  Score=47.93  Aligned_cols=29  Identities=31%  Similarity=0.401  Sum_probs=24.3

Q ss_pred             CeeeecccCCcEEE------CCCCceEEeecccce
Q 014904          165 KIIHRDIKAANILL------DFKFEAKVADFGLAK  193 (416)
Q Consensus       165 ~iiHrDIkp~NILl------~~~~~~kl~DFGla~  193 (416)
                      .++|+|+.+.|||+      +++..++|+||..+.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            36799999999999      455679999998875


No 284
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=88.86  E-value=1.1  Score=40.04  Aligned_cols=82  Identities=10%  Similarity=0.100  Sum_probs=60.1

Q ss_pred             CCCcccceEEEEEeCCeEEEEEEecCCC-CHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeeeecccCCc
Q 014904           98 HHKHLVSLVGYYTAGSQRMLVYEFVPNN-TLEFHLHGKGRPTMDWLTRLKIALGSAKGLA-YLHEDCHPKIIHRDIKAAN  175 (416)
Q Consensus        98 ~h~niv~l~~~~~~~~~~~lV~e~~~~~-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~-~LH~~~~~~iiHrDIkp~N  175 (416)
                      .||++  -..+-.+.+...+.|+.-++. ++.. +.     .++...+++++.+++.... +++     .-+|--|.|.|
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~-----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N  114 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR-----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN  114 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH-----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH-----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence            68888  445557777777777765333 4443 32     4788899999999887655 444     34778899999


Q ss_pred             EEECCCCceEEeecccc
Q 014904          176 ILLDFKFEAKVADFGLA  192 (416)
Q Consensus       176 ILl~~~~~~kl~DFGla  192 (416)
                      |+++.++.++|.-.|+-
T Consensus       115 L~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A          115 LMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             EEECTTCCEEESCCEET
T ss_pred             EEEeCCCcEEEEEcCCc
Confidence            99999999999877764


No 285
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.63  E-value=0.85  Score=40.68  Aligned_cols=115  Identities=8%  Similarity=0.098  Sum_probs=77.2

Q ss_pred             CCCcccceEEEEEeCCeEEEEEEecC-CCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeeecccCCcE
Q 014904           98 HHKHLVSLVGYYTAGSQRMLVYEFVP-NNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANI  176 (416)
Q Consensus        98 ~h~niv~l~~~~~~~~~~~lV~e~~~-~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~iiHrDIkp~NI  176 (416)
                      .||+++.. .+-.+.+...+.|+.-+ ..++.. +.     .++...+++++.+++....+++.     =+|--|.|.||
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL  110 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL  110 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence            68888877 56666677666666443 223333 22     47888999999999987755543     36888999999


Q ss_pred             EECCCCceEEeecccceeccCCCcceeecccccccccChhhhccCCCCchhhhHhHHHHHHHHHhCCCCCC
Q 014904          177 LLDFKFEAKVADFGLAKIASDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVD  247 (416)
Q Consensus       177 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~YlaPE~~~~~~~t~ksDV~SlGvvL~elltG~~pf~  247 (416)
                      +++.++.+++.-.|+....                  +|.     .+++..=+-.+=+++..+++++..|+
T Consensus       111 ~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          111 FFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             EECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             EEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999999877763221                  221     11222223356678888999888764


No 286
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.67  E-value=0.36  Score=48.43  Aligned_cols=61  Identities=5%  Similarity=-0.024  Sum_probs=18.2

Q ss_pred             cCceecccCcEEEEEEEeCC-CcEEEE------EEeecCCc--ccHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 014904           48 DANLLGQGGFGYVHRGVLPN-GKEVAI------KQLKAGSG--QGEREFQAEVEIISRVHHKHLVSLVGYYTA  111 (416)
Q Consensus        48 ~~~~LG~G~~g~Vy~~~~~~-g~~vav------K~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  111 (416)
                      ..+.||   ||.||+|.+.. ..+|||      |..+....  +....|.+|..+...++|+|+++.+++...
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            345666   99999999753 467888      76654322  222467788888888999999999887654


No 287
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=63.24  E-value=0.36  Score=48.58  Aligned_cols=32  Identities=22%  Similarity=0.293  Sum_probs=25.2

Q ss_pred             cccHHHHHHHHHHHHhcCCCcccceEEEEEeC
Q 014904           81 GQGEREFQAEVEIISRVHHKHLVSLVGYYTAG  112 (416)
Q Consensus        81 ~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  112 (416)
                      .++.++|..|++++.+++|+|+|+++|||...
T Consensus       320 ~~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          320 GQGSETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            34467899999999999999999999999653


No 288
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=58.17  E-value=11  Score=35.81  Aligned_cols=136  Identities=15%  Similarity=0.083  Sum_probs=68.7

Q ss_pred             ccCcEEEEEEEeCCCcEEEEEEeecCCcccHHHHHHHHHHHHhcCCCcccceEEE----------------------EEe
Q 014904           54 QGGFGYVHRGVLPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGY----------------------YTA  111 (416)
Q Consensus        54 ~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~----------------------~~~  111 (416)
                      .+|.+.||.+.. ++..++||-..   ....+.|-.++...-.+..|+..-+.-.                      ...
T Consensus        78 ~~Gstgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~~l~  153 (342)
T 1cja_A           78 EKGTEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVITTLA  153 (342)
T ss_dssp             CSTTSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHHHHT
T ss_pred             cCCCCCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHHHhh
Confidence            344556666665 57789999441   2222334445544444555553222110                      001


Q ss_pred             CCeEEEEEEecCCCCHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeee-ecccCCcEEECCCCc-eEEee
Q 014904          112 GSQRMLVYEFVPNNTLEFHLHGKGRPTMDWLTRLKIALGSAKGLAYLHEDC-HPKIIH-RDIKAANILLDFKFE-AKVAD  188 (416)
Q Consensus       112 ~~~~~lV~e~~~~~sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-~~~iiH-rDIkp~NILl~~~~~-~kl~D  188 (416)
                      ....+++|+|++|..|...-+..-...+.......  ++-+-++..+.... +...+. .--.+.|||++.++. +.++|
T Consensus       154 ~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~--LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID  231 (342)
T 1cja_A          154 NQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQ--LGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID  231 (342)
T ss_dssp             TCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHH--HHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred             cccceehhhhcCCCccccchhhhhhhhcCHHHHHh--hchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence            22467999999877665432210000122222221  11233455555443 222222 235899999977554 88999


Q ss_pred             cccceec
Q 014904          189 FGLAKIA  195 (416)
Q Consensus       189 FGla~~~  195 (416)
                      -+++..-
T Consensus       232 hn~af~~  238 (342)
T 1cja_A          232 SKIIPLD  238 (342)
T ss_dssp             CCCCCCC
T ss_pred             CCccccC
Confidence            9888543


No 289
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=53.80  E-value=97  Score=31.86  Aligned_cols=82  Identities=15%  Similarity=0.141  Sum_probs=48.9

Q ss_pred             cceEEEEEeCCeEEEEEEecCCCCHHHHhhcCC-----------CC----CCCHHHHHHHHHHHH--HHHHHHHhcCCCC
Q 014904          103 VSLVGYYTAGSQRMLVYEFVPNNTLEFHLHGKG-----------RP----TMDWLTRLKIALGSA--KGLAYLHEDCHPK  165 (416)
Q Consensus       103 v~l~~~~~~~~~~~lV~e~~~~~sL~~~l~~~~-----------~~----~l~~~~~~~i~~~ia--~aL~~LH~~~~~~  165 (416)
                      ++.+.+...+....+ .|++++.++.+.+...+           ..    ...|..+..++..+|  ..+.|+=.     
T Consensus       402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG-----  475 (614)
T 3ls8_A          402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG-----  475 (614)
T ss_dssp             CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence            445555555555544 57888766665553221           00    112445555554443  23334432     


Q ss_pred             eeeecccCCcEEECCCCceEEeecccc
Q 014904          166 IIHRDIKAANILLDFKFEAKVADFGLA  192 (416)
Q Consensus       166 iiHrDIkp~NILl~~~~~~kl~DFGla  192 (416)
                      |  +|=.++||||+.+|.+.=+|||..
T Consensus       476 i--gDRH~~NILld~tG~v~HIDFG~~  500 (614)
T 3ls8_A          476 V--GDRHLDNLLLTKTGKLFHIDFGYI  500 (614)
T ss_dssp             C--CCCCTTSEEECTTSCEEECCCSSC
T ss_pred             c--cCCCCcceeEcCCCCEeeeehHHh
Confidence            2  566899999999999999999986


No 290
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=52.18  E-value=81  Score=34.77  Aligned_cols=25  Identities=24%  Similarity=0.173  Sum_probs=22.4

Q ss_pred             ecccCCcEEECCCCceEEeecccce
Q 014904          169 RDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       169 rDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      +|=.++||||+.+|.+.=+|||.+-
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             cCCCCcceEEeCCCCEEEEeehhhh
Confidence            5678999999999999999999873


No 291
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=24.99  E-value=43  Score=25.96  Aligned_cols=37  Identities=16%  Similarity=0.149  Sum_probs=31.7

Q ss_pred             CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHhcccc
Q 014904          287 NHNEMARMVACAAACVRHSARRRPRMSQIVRALEGDA  323 (416)
Q Consensus       287 ~~~~~~~l~~l~~~cl~~~p~~RPt~~evv~~L~~~~  323 (416)
                      ..+.-..+...+..+++.+|.++-|..++.+.|.|+.
T Consensus        45 tpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~gDv   81 (104)
T 2fq3_A           45 TPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSGDA   81 (104)
T ss_dssp             CHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSCSCH
T ss_pred             CHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHccccH
Confidence            3455677889999999999999999999999997653


No 292
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.58  E-value=44  Score=34.96  Aligned_cols=25  Identities=28%  Similarity=0.238  Sum_probs=22.7

Q ss_pred             ecccCCcEEECCCCceEEeecccce
Q 014904          169 RDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       169 rDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      +|=+++||||+.+|.+.=+|||..-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            6788999999999999999999863


No 293
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=21.57  E-value=57  Score=35.54  Aligned_cols=25  Identities=24%  Similarity=0.179  Sum_probs=22.3

Q ss_pred             ecccCCcEEECCCCceEEeecccce
Q 014904          169 RDIKAANILLDFKFEAKVADFGLAK  193 (416)
Q Consensus       169 rDIkp~NILl~~~~~~kl~DFGla~  193 (416)
                      +|=.++||||+.+|.+.=+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            6778999999999999999999874


Done!