Query 014905
Match_columns 416
No_of_seqs 563 out of 1606
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 01:13:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014905.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014905hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4332 Predicted sugar transp 100.0 1.8E-43 3.9E-48 291.1 20.9 408 1-416 1-421 (454)
2 PF05631 DUF791: Protein of un 100.0 1.1E-36 2.5E-41 266.3 36.4 330 4-334 1-331 (354)
3 TIGR00903 2A0129 major facilit 100.0 6.1E-29 1.3E-33 229.4 29.7 313 54-399 8-329 (368)
4 TIGR00900 2A0121 H+ Antiporter 100.0 7.6E-29 1.6E-33 230.4 27.6 330 43-400 5-351 (365)
5 COG2814 AraJ Arabinose efflux 100.0 2.5E-28 5.4E-33 219.1 27.7 321 48-402 24-351 (394)
6 COG2271 UhpC Sugar phosphate p 100.0 3.2E-28 6.9E-33 215.4 25.5 342 32-397 20-393 (448)
7 PRK03545 putative arabinose tr 100.0 8.9E-28 1.9E-32 225.2 30.3 312 54-401 26-344 (390)
8 PRK10406 alpha-ketoglutarate t 100.0 4.1E-27 8.9E-32 223.4 33.3 318 53-396 37-382 (432)
9 TIGR00891 2A0112 putative sial 100.0 5.1E-27 1.1E-31 221.4 30.2 326 48-401 23-379 (405)
10 PRK11551 putative 3-hydroxyphe 100.0 5.6E-27 1.2E-31 221.2 30.4 321 51-401 29-359 (406)
11 PRK14995 methyl viologen resis 100.0 5.5E-27 1.2E-31 226.0 29.9 330 48-403 17-404 (495)
12 TIGR00710 efflux_Bcr_CflA drug 100.0 5.9E-27 1.3E-31 219.5 28.8 322 48-396 16-345 (385)
13 PRK10213 nepI ribonucleoside t 100.0 1.2E-26 2.7E-31 217.1 30.9 310 52-397 35-351 (394)
14 PRK11646 multidrug resistance 100.0 2E-26 4.4E-31 216.1 31.8 322 47-402 20-349 (400)
15 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.5E-26 3.2E-31 217.9 29.4 317 56-401 27-384 (412)
16 TIGR00890 2A0111 Oxalate/Forma 100.0 2.2E-27 4.8E-32 221.5 23.6 318 55-401 21-346 (377)
17 PF07690 MFS_1: Major Facilita 100.0 6.6E-28 1.4E-32 223.0 19.7 330 44-399 3-348 (352)
18 PRK15402 multidrug efflux syst 100.0 3.2E-26 6.9E-31 215.9 30.6 326 51-401 27-359 (406)
19 TIGR00899 2A0120 sugar efflux 100.0 1.6E-26 3.5E-31 215.7 28.0 328 43-401 3-338 (375)
20 PRK05122 major facilitator sup 100.0 1.8E-26 3.9E-31 217.2 28.0 313 47-399 25-351 (399)
21 PRK09556 uhpT sugar phosphate 100.0 7.5E-27 1.6E-31 223.8 25.8 317 56-397 48-396 (467)
22 PRK09874 drug efflux system pr 100.0 8.8E-26 1.9E-30 213.2 32.3 323 47-402 24-363 (408)
23 TIGR00902 2A0127 phenyl propri 100.0 8.2E-26 1.8E-30 211.1 31.6 317 42-392 9-334 (382)
24 PRK10133 L-fucose transporter; 100.0 2.5E-25 5.3E-30 210.6 34.7 319 48-392 37-388 (438)
25 PRK12382 putative transporter; 100.0 3.8E-26 8.3E-31 214.4 28.9 315 47-401 25-353 (392)
26 PRK10489 enterobactin exporter 100.0 9.5E-27 2.1E-31 220.2 23.7 326 44-401 24-363 (417)
27 PRK09952 shikimate transporter 100.0 2.4E-25 5.3E-30 211.3 33.2 301 65-392 51-385 (438)
28 PRK11663 regulatory protein Uh 100.0 3.2E-26 7E-31 217.3 26.9 321 55-401 41-388 (434)
29 PRK10642 proline/glycine betai 100.0 1.8E-25 3.8E-30 215.4 32.3 291 78-391 63-383 (490)
30 TIGR00711 efflux_EmrB drug res 100.0 2E-26 4.4E-31 222.5 25.8 329 48-402 13-400 (485)
31 PRK11195 lysophospholipid tran 100.0 3.1E-26 6.7E-31 214.3 25.8 329 41-404 7-348 (393)
32 PRK09705 cynX putative cyanate 100.0 7.3E-26 1.6E-30 212.1 27.6 310 54-399 26-342 (393)
33 PRK15075 citrate-proton sympor 100.0 3.4E-25 7.4E-30 210.4 32.3 325 48-392 26-373 (434)
34 TIGR00893 2A0114 d-galactonate 100.0 2.9E-26 6.4E-31 215.3 23.8 322 54-402 11-363 (399)
35 PRK12307 putative sialic acid 99.9 1.8E-25 4E-30 212.2 28.6 317 51-399 32-370 (426)
36 PRK11652 emrD multidrug resist 99.9 3.2E-25 6.9E-30 208.3 29.7 323 48-401 19-349 (394)
37 PRK15011 sugar efflux transpor 99.9 4.2E-25 9.1E-30 207.1 30.2 326 41-399 19-353 (393)
38 PRK15403 multidrug efflux syst 99.9 6.6E-25 1.4E-29 206.6 31.5 325 48-397 27-358 (413)
39 PRK10504 putative transporter; 99.9 2.5E-25 5.5E-30 213.9 29.0 327 48-401 21-404 (471)
40 TIGR00881 2A0104 phosphoglycer 99.9 3.7E-26 8.1E-31 213.4 22.1 326 52-402 10-362 (379)
41 PRK10054 putative transporter; 99.9 4.6E-25 9.9E-30 206.6 29.2 318 42-392 12-340 (395)
42 TIGR00886 2A0108 nitrite extru 99.9 4.6E-25 1E-29 205.2 28.9 328 48-397 12-364 (366)
43 TIGR00897 2A0118 polyol permea 99.9 4.2E-25 9.1E-30 207.7 28.7 338 38-401 11-365 (402)
44 PRK11102 bicyclomycin/multidru 99.9 6E-25 1.3E-29 205.3 28.7 317 51-394 5-330 (377)
45 TIGR00895 2A0115 benzoate tran 99.9 2.1E-25 4.5E-30 209.8 25.7 315 54-399 34-387 (398)
46 PLN00028 nitrate transmembrane 99.9 1.2E-24 2.5E-29 208.5 31.1 325 51-399 50-396 (476)
47 PRK11128 putative 3-phenylprop 99.9 1.2E-24 2.7E-29 203.2 30.3 312 46-392 13-334 (382)
48 PRK03699 putative transporter; 99.9 7.2E-25 1.6E-29 205.7 27.9 312 51-397 21-340 (394)
49 PRK10091 MFS transport protein 99.9 3.2E-24 6.8E-29 200.5 31.4 305 48-387 14-327 (382)
50 TIGR00901 2A0125 AmpG-related 99.9 2.8E-24 6E-29 199.1 30.0 322 55-396 6-355 (356)
51 TIGR01299 synapt_SV2 synaptic 99.9 5.6E-25 1.2E-29 216.4 26.5 324 56-402 186-700 (742)
52 PRK11043 putative transporter; 99.9 4.2E-24 9.2E-29 201.2 31.4 321 48-397 17-342 (401)
53 PRK11273 glpT sn-glycerol-3-ph 99.9 1.8E-24 3.9E-29 206.5 28.0 313 62-399 53-396 (452)
54 PF05977 MFS_3: Transmembrane 99.9 1.2E-24 2.7E-29 207.2 26.3 335 40-404 13-361 (524)
55 PRK03633 putative MFS family t 99.9 1.5E-24 3.2E-29 202.7 26.3 320 37-398 3-333 (381)
56 TIGR00883 2A0106 metabolite-pr 99.9 5.7E-24 1.2E-28 199.7 30.0 300 69-391 27-353 (394)
57 PRK10473 multidrug efflux syst 99.9 2.2E-23 4.8E-28 195.7 33.1 267 46-329 12-286 (392)
58 PRK03893 putative sialic acid 99.9 9.7E-24 2.1E-28 204.4 30.0 325 48-401 31-417 (496)
59 TIGR00712 glpT glycerol-3-phos 99.9 1.6E-23 3.5E-28 199.2 30.3 312 62-398 51-393 (438)
60 TIGR00885 fucP L-fucose:H+ sym 99.9 4.4E-23 9.5E-28 193.6 31.6 313 46-388 12-359 (410)
61 TIGR00892 2A0113 monocarboxyla 99.9 9.8E-24 2.1E-28 201.1 27.3 318 57-401 39-384 (455)
62 PRK15034 nitrate/nitrite trans 99.9 2.3E-23 5E-28 193.8 28.0 316 40-381 34-376 (462)
63 cd06174 MFS The Major Facilita 99.9 1.7E-23 3.7E-28 193.3 26.2 299 47-401 9-316 (352)
64 TIGR00882 2A0105 oligosacchari 99.9 3.6E-23 7.7E-28 194.5 27.8 323 45-398 10-356 (396)
65 TIGR00896 CynX cyanate transpo 99.9 1.6E-23 3.4E-28 194.0 24.9 308 54-396 17-332 (355)
66 TIGR00898 2A0119 cation transp 99.9 9.6E-24 2.1E-28 204.8 23.0 305 65-401 117-461 (505)
67 PRK09528 lacY galactoside perm 99.9 5E-23 1.1E-27 194.9 26.5 323 44-397 17-363 (420)
68 PRK10077 xylE D-xylose transpo 99.9 9.2E-23 2E-27 196.7 26.4 308 67-400 50-414 (479)
69 TIGR00894 2A0114euk Na(+)-depe 99.9 3.2E-23 6.9E-28 198.9 21.5 310 66-400 70-410 (465)
70 PRK06814 acylglycerophosphoeth 99.9 2.4E-22 5.1E-27 213.0 29.6 345 42-401 16-385 (1140)
71 TIGR00792 gph sugar (Glycoside 99.9 1.4E-22 3.1E-27 193.1 23.4 329 50-402 12-370 (437)
72 TIGR00889 2A0110 nucleoside tr 99.9 4.1E-22 8.9E-27 187.8 25.2 324 42-398 7-357 (418)
73 TIGR00887 2A0109 phosphate:H+ 99.9 6E-22 1.3E-26 191.6 26.5 312 68-401 52-443 (502)
74 TIGR00879 SP MFS transporter, 99.9 1.5E-22 3.3E-27 195.0 21.9 313 69-401 68-434 (481)
75 PRK08633 2-acyl-glycerophospho 99.9 8.8E-22 1.9E-26 209.3 29.7 324 48-399 20-371 (1146)
76 COG2223 NarK Nitrate/nitrite t 99.9 4.5E-22 9.7E-27 176.9 22.6 332 39-398 13-361 (417)
77 PF03825 Nuc_H_symport: Nucleo 99.9 4.7E-21 1E-25 177.6 29.8 331 38-395 3-346 (400)
78 PRK11010 ampG muropeptide tran 99.9 5.4E-21 1.2E-25 183.6 30.5 322 48-398 23-364 (491)
79 KOG1330 Sugar transporter/spin 99.9 2.4E-24 5.2E-29 192.8 6.6 312 65-398 61-397 (493)
80 TIGR00924 yjdL_sub1_fam amino 99.9 2.4E-21 5.3E-26 185.1 27.2 334 48-401 21-432 (475)
81 PRK11902 ampG muropeptide tran 99.9 1.1E-20 2.4E-25 177.8 31.1 319 42-388 4-345 (402)
82 PRK10207 dipeptide/tripeptide 99.9 2.7E-21 5.9E-26 184.8 25.7 346 38-402 12-431 (489)
83 COG0738 FucP Fucose permease [ 99.9 1.1E-19 2.5E-24 160.6 32.9 313 47-390 23-363 (422)
84 KOG2532 Permease of the major 99.9 1.3E-21 2.8E-26 183.4 18.6 308 66-399 67-406 (466)
85 PRK09584 tppB putative tripept 99.9 2.4E-19 5.2E-24 172.4 32.5 336 38-392 19-424 (500)
86 TIGR02718 sider_RhtX_FptX side 99.9 2.9E-19 6.3E-24 167.6 30.0 333 44-401 8-355 (390)
87 KOG0569 Permease of the major 99.9 2.8E-20 6.1E-25 172.5 21.0 316 65-401 47-419 (485)
88 TIGR00806 rfc RFC reduced fola 99.9 1.2E-18 2.6E-23 159.5 31.2 335 33-398 20-401 (511)
89 KOG3764 Vesicular amine transp 99.9 9.8E-21 2.1E-25 166.1 13.8 227 66-313 100-337 (464)
90 TIGR00805 oat sodium-independe 99.8 9E-20 2E-24 179.2 20.0 261 54-325 50-412 (633)
91 PF01306 LacY_symp: LacY proto 99.8 2.2E-18 4.7E-23 157.0 26.5 322 47-398 17-361 (412)
92 KOG0254 Predicted transporter 99.8 1.2E-18 2.5E-23 168.8 23.8 311 72-398 89-443 (513)
93 KOG2533 Permease of the major 99.8 6E-19 1.3E-23 165.9 20.1 237 65-307 74-336 (495)
94 PRK09669 putative symporter Ya 99.8 1E-17 2.2E-22 159.8 28.4 305 54-381 26-350 (444)
95 KOG2504 Monocarboxylate transp 99.8 1.8E-18 3.9E-23 164.4 22.0 310 65-403 74-441 (509)
96 PF13347 MFS_2: MFS/sugar tran 99.8 2.1E-19 4.5E-24 170.5 15.1 322 56-398 20-370 (428)
97 TIGR01301 GPH_sucrose GPH fami 99.8 3.9E-17 8.4E-22 153.4 29.9 338 48-397 15-429 (477)
98 KOG2615 Permease of the major 99.8 6.2E-18 1.3E-22 147.8 21.3 305 68-397 64-399 (451)
99 PRK10429 melibiose:sodium symp 99.8 1.2E-17 2.7E-22 160.2 25.1 315 48-381 17-355 (473)
100 PRK09848 glucuronide transport 99.8 4E-17 8.7E-22 155.9 26.4 330 48-401 19-377 (448)
101 PRK15462 dipeptide/tripeptide 99.8 6.3E-16 1.4E-20 145.9 30.6 327 48-393 20-420 (493)
102 PF06609 TRI12: Fungal trichot 99.8 1.1E-16 2.4E-21 152.5 25.6 315 64-404 71-459 (599)
103 COG2211 MelB Na+/melibiose sym 99.8 6.2E-16 1.4E-20 142.4 28.3 310 51-381 26-358 (467)
104 COG2807 CynX Cyanate permease 99.8 8.8E-16 1.9E-20 134.1 26.8 296 55-385 30-331 (395)
105 TIGR00788 fbt folate/biopterin 99.8 1.6E-16 3.5E-21 151.6 23.9 335 48-402 37-403 (468)
106 KOG0255 Synaptic vesicle trans 99.8 5.6E-17 1.2E-21 157.9 21.1 305 64-399 110-455 (521)
107 KOG0253 Synaptic vesicle trans 99.7 1.9E-16 4.2E-21 137.7 19.4 307 62-400 102-484 (528)
108 PF00083 Sugar_tr: Sugar (and 99.7 9.3E-22 2E-26 188.2 -17.4 311 72-402 46-401 (451)
109 PRK11462 putative transporter; 99.7 2.6E-15 5.7E-20 143.2 26.0 307 50-380 22-348 (460)
110 KOG0252 Inorganic phosphate tr 99.7 1E-17 2.2E-22 149.9 6.8 316 69-400 81-456 (538)
111 PTZ00207 hypothetical protein; 99.7 3.2E-14 7E-19 136.6 29.4 149 58-219 48-205 (591)
112 PF11700 ATG22: Vacuole efflux 99.7 2.9E-14 6.3E-19 135.0 25.8 311 73-402 71-432 (477)
113 COG2270 Permeases of the major 99.6 2E-13 4.3E-18 122.2 24.2 310 72-401 58-392 (438)
114 COG3104 PTR2 Dipeptide/tripept 99.6 1.1E-12 2.4E-17 120.1 24.7 341 37-393 18-437 (498)
115 TIGR01272 gluP glucose/galacto 99.6 1E-12 2.2E-17 118.6 22.6 241 120-390 6-269 (310)
116 TIGR00889 2A0110 nucleoside tr 99.5 1.8E-12 3.9E-17 122.4 23.1 162 55-225 226-408 (418)
117 KOG4686 Predicted sugar transp 99.5 1.2E-14 2.6E-19 122.2 6.7 310 65-398 72-400 (459)
118 KOG2563 Permease of the major 99.5 4.7E-12 1E-16 114.1 22.0 316 65-401 73-410 (480)
119 KOG2325 Predicted transporter/ 99.5 1.8E-12 3.9E-17 120.0 18.6 174 48-227 45-237 (488)
120 PRK15011 sugar efflux transpor 99.5 1.1E-11 2.5E-16 116.3 23.3 151 54-216 233-388 (393)
121 PF03209 PUCC: PUCC protein; 99.5 1.1E-10 2.3E-15 105.1 27.1 303 65-393 8-344 (403)
122 PRK05122 major facilitator sup 99.4 3.3E-11 7.2E-16 113.5 23.8 157 50-220 229-390 (399)
123 TIGR00899 2A0120 sugar efflux 99.4 4.1E-11 8.9E-16 111.8 23.1 149 56-216 218-371 (375)
124 PRK10642 proline/glycine betai 99.4 7E-11 1.5E-15 114.2 24.7 163 52-225 265-435 (490)
125 PRK09528 lacY galactoside perm 99.4 3.5E-11 7.6E-16 114.1 22.0 150 66-223 256-407 (420)
126 COG2814 AraJ Arabinose efflux 99.4 4.6E-11 1E-15 108.2 21.1 205 3-219 164-386 (394)
127 PRK03545 putative arabinose tr 99.4 7E-11 1.5E-15 110.9 23.3 152 57-220 225-381 (390)
128 PRK03633 putative MFS family t 99.4 1.1E-10 2.3E-15 109.3 24.0 152 53-216 216-369 (381)
129 PRK09874 drug efflux system pr 99.4 6.2E-11 1.3E-15 112.0 22.4 158 51-220 233-399 (408)
130 TIGR00902 2A0127 phenyl propri 99.4 9.7E-11 2.1E-15 109.6 23.1 155 48-215 216-375 (382)
131 KOG2816 Predicted transporter 99.4 7.3E-11 1.6E-15 110.8 21.6 288 81-401 71-381 (463)
132 PRK12382 putative transporter; 99.4 9.8E-11 2.1E-15 110.0 22.2 154 51-218 230-388 (392)
133 PRK03699 putative transporter; 99.4 7.1E-11 1.5E-15 111.0 21.0 154 51-216 219-377 (394)
134 PRK09952 shikimate transporter 99.4 2.7E-10 5.8E-15 108.5 24.0 160 52-221 265-434 (438)
135 TIGR00890 2A0111 Oxalate/Forma 99.4 1.1E-10 2.3E-15 108.9 20.3 143 58-212 226-375 (377)
136 PRK10489 enterobactin exporter 99.4 1.8E-10 3.8E-15 109.2 21.9 154 58-223 244-403 (417)
137 TIGR00880 2_A_01_02 Multidrug 99.3 1.1E-11 2.4E-16 98.0 10.6 133 78-221 4-140 (141)
138 PRK11128 putative 3-phenylprop 99.3 5E-10 1.1E-14 104.8 23.2 153 50-215 218-375 (382)
139 PRK11551 putative 3-hydroxyphe 99.3 3E-10 6.5E-15 107.3 21.7 153 55-218 238-395 (406)
140 PF01770 Folate_carrier: Reduc 99.3 1.5E-08 3.2E-13 92.5 30.1 334 37-398 2-388 (412)
141 PRK09705 cynX putative cyanate 99.3 1.2E-09 2.6E-14 102.5 24.1 164 49-224 217-386 (393)
142 TIGR00897 2A0118 polyol permea 99.3 1E-09 2.2E-14 103.4 23.4 149 55-216 240-398 (402)
143 TIGR00883 2A0106 metabolite-pr 99.3 6.4E-10 1.4E-14 104.3 20.3 148 51-209 233-391 (394)
144 PRK09556 uhpT sugar phosphate 99.3 9.2E-10 2E-14 105.8 20.9 150 56-216 277-446 (467)
145 PRK11010 ampG muropeptide tran 99.3 1.8E-08 3.8E-13 97.3 29.6 160 51-218 236-402 (491)
146 TIGR02718 sider_RhtX_FptX side 99.2 3.1E-09 6.7E-14 99.8 23.1 155 48-214 219-386 (390)
147 cd06174 MFS The Major Facilita 99.2 1.8E-09 3.9E-14 99.5 20.4 158 48-216 186-349 (352)
148 PRK10091 MFS transport protein 99.2 5.2E-09 1.1E-13 97.9 22.9 151 58-216 220-373 (382)
149 TIGR00882 2A0105 oligosacchari 99.2 4E-09 8.8E-14 99.2 21.9 140 68-215 250-391 (396)
150 PRK15075 citrate-proton sympor 99.2 4.9E-09 1.1E-13 99.8 22.5 132 53-193 254-395 (434)
151 PF03137 OATP: Organic Anion T 99.2 2.4E-12 5.2E-17 123.8 -0.4 334 65-401 31-502 (539)
152 PF05977 MFS_3: Transmembrane 99.2 5.9E-09 1.3E-13 100.2 22.7 146 59-216 240-391 (524)
153 PF03092 BT1: BT1 family; Int 99.2 1.4E-09 3.1E-14 102.7 18.3 323 62-401 14-369 (433)
154 PRK10406 alpha-ketoglutarate t 99.2 1E-08 2.2E-13 97.6 24.0 155 52-216 258-421 (432)
155 PF06963 FPN1: Ferroportin1 (F 99.2 9E-08 1.9E-12 89.0 28.5 341 39-398 4-404 (432)
156 PRK15402 multidrug efflux syst 99.2 8.4E-09 1.8E-13 97.4 22.4 146 65-221 244-397 (406)
157 PF11700 ATG22: Vacuole efflux 99.2 1.9E-08 4.1E-13 95.7 24.5 148 62-216 305-465 (477)
158 KOG3626 Organic anion transpor 99.2 1.5E-09 3.3E-14 105.0 16.8 278 42-322 98-471 (735)
159 PRK11902 ampG muropeptide tran 99.1 2.8E-08 6E-13 93.7 25.0 143 62-216 234-387 (402)
160 TIGR01299 synapt_SV2 synaptic 99.1 4.7E-09 1E-13 104.5 20.2 136 75-223 598-737 (742)
161 PRK10504 putative transporter; 99.1 1.1E-08 2.3E-13 98.7 22.4 113 62-175 285-406 (471)
162 PRK10213 nepI ribonucleoside t 99.1 1.9E-08 4.2E-13 94.4 23.5 146 58-215 237-387 (394)
163 PF01306 LacY_symp: LacY proto 99.1 1.1E-08 2.3E-13 94.0 19.5 149 68-224 255-405 (412)
164 PRK10473 multidrug efflux syst 99.1 2.7E-08 5.8E-13 93.5 22.7 75 65-139 232-307 (392)
165 TIGR00893 2A0114 d-galactonate 99.1 1.3E-08 2.8E-13 95.4 20.4 156 48-216 226-396 (399)
166 PRK11273 glpT sn-glycerol-3-ph 99.1 3.6E-08 7.8E-13 94.4 23.4 154 54-218 270-434 (452)
167 PLN00028 nitrate transmembrane 99.1 8.5E-09 1.8E-13 99.3 19.0 142 65-218 281-432 (476)
168 TIGR00892 2A0113 monocarboxyla 99.1 2.6E-09 5.7E-14 102.2 15.4 148 55-213 259-415 (455)
169 PRK10054 putative transporter; 99.1 1.6E-08 3.4E-13 95.1 20.0 147 65-223 237-388 (395)
170 PRK03893 putative sialic acid 99.1 8.9E-09 1.9E-13 100.0 18.5 139 58-208 296-442 (496)
171 TIGR00900 2A0121 H+ Antiporter 99.1 2.2E-08 4.8E-13 92.9 20.1 122 62-192 235-363 (365)
172 TIGR01272 gluP glucose/galacto 99.1 6.1E-08 1.3E-12 87.6 22.0 142 53-208 156-304 (310)
173 TIGR00896 CynX cyanate transpo 99.0 4.1E-08 8.9E-13 90.9 20.6 131 52-193 212-349 (355)
174 TIGR00879 SP MFS transporter, 99.0 1.3E-08 2.9E-13 98.0 18.1 151 62-223 308-474 (481)
175 COG2807 CynX Cyanate permease 99.0 5.9E-08 1.3E-12 85.7 20.1 165 48-220 219-386 (395)
176 TIGR00891 2A0112 putative sial 99.0 2.5E-08 5.3E-13 94.0 18.8 128 65-203 267-400 (405)
177 PRK10077 xylE D-xylose transpo 99.0 1.6E-08 3.6E-13 97.6 17.0 156 62-224 295-462 (479)
178 TIGR00792 gph sugar (Glycoside 99.0 1.3E-07 2.9E-12 90.2 22.3 119 70-193 255-381 (437)
179 PRK10133 L-fucose transporter; 99.0 2E-07 4.3E-12 88.7 22.8 138 65-215 288-429 (438)
180 PF03825 Nuc_H_symport: Nucleo 99.0 2.4E-07 5.1E-12 86.5 22.7 166 48-222 218-398 (400)
181 PRK14995 methyl viologen resis 99.0 2.3E-07 5.1E-12 89.9 23.6 121 58-180 280-409 (495)
182 PRK11663 regulatory protein Uh 99.0 2.2E-07 4.7E-12 88.6 22.7 154 56-221 262-426 (434)
183 PRK12307 putative sialic acid 99.0 1.1E-07 2.5E-12 90.3 20.8 129 58-200 252-389 (426)
184 PRK09848 glucuronide transport 98.9 1.2E-07 2.6E-12 90.8 20.4 91 62-153 252-347 (448)
185 PRK11102 bicyclomycin/multidru 98.9 2.5E-07 5.3E-12 86.5 22.0 94 65-159 223-323 (377)
186 TIGR00901 2A0125 AmpG-related 98.9 4.8E-08 1E-12 90.5 17.0 112 50-163 222-350 (356)
187 TIGR00712 glpT glycerol-3-phos 98.9 1.9E-07 4.1E-12 89.1 21.1 158 55-223 269-437 (438)
188 PRK11195 lysophospholipid tran 98.9 4.8E-07 1E-11 85.0 22.8 141 62-215 229-376 (393)
189 PRK11043 putative transporter; 98.9 3.5E-07 7.6E-12 86.2 22.0 101 62-163 227-336 (401)
190 PRK11646 multidrug resistance 98.9 2.1E-07 4.5E-12 87.7 20.2 145 62-215 232-384 (400)
191 TIGR00710 efflux_Bcr_CflA drug 98.9 2.9E-07 6.4E-12 86.1 21.3 96 65-161 235-338 (385)
192 KOG3098 Uncharacterized conser 98.9 5.6E-07 1.2E-11 83.7 21.7 316 78-400 56-402 (461)
193 COG2223 NarK Nitrate/nitrite t 98.9 2E-07 4.2E-12 84.2 18.0 148 56-218 237-400 (417)
194 PRK08633 2-acyl-glycerophospho 98.9 3.2E-07 6.9E-12 98.5 22.2 115 55-171 250-371 (1146)
195 TIGR00894 2A0114euk Na(+)-depe 98.8 3.1E-07 6.6E-12 88.5 19.2 156 53-216 277-447 (465)
196 COG2271 UhpC Sugar phosphate p 98.8 4.4E-07 9.5E-12 82.0 18.2 149 62-220 276-435 (448)
197 TIGR00711 efflux_EmrB drug res 98.8 3.8E-07 8.2E-12 88.3 19.3 113 57-171 275-397 (485)
198 PF13347 MFS_2: MFS/sugar tran 98.8 3.3E-07 7.2E-12 87.2 18.0 130 48-180 236-376 (428)
199 PF07690 MFS_1: Major Facilita 98.8 4.2E-07 9E-12 83.9 18.0 114 48-163 217-340 (352)
200 PRK15034 nitrate/nitrite trans 98.8 1.1E-06 2.4E-11 82.8 20.6 154 62-219 276-454 (462)
201 PF12832 MFS_1_like: MFS_1 lik 98.8 7.6E-08 1.6E-12 66.5 9.3 67 44-111 7-74 (77)
202 COG2270 Permeases of the major 98.8 2.5E-07 5.5E-12 83.6 14.8 148 62-216 276-426 (438)
203 COG2211 MelB Na+/melibiose sym 98.8 1.4E-06 3E-11 81.2 19.6 104 48-153 247-355 (467)
204 PRK09669 putative symporter Ya 98.8 2.9E-06 6.3E-11 81.1 22.7 118 71-193 263-389 (444)
205 TIGR00898 2A0119 cation transp 98.7 1.9E-06 4.1E-11 83.9 20.3 143 65-224 351-499 (505)
206 PRK15403 multidrug efflux syst 98.7 4.9E-06 1.1E-10 78.7 22.3 143 62-215 242-393 (413)
207 PRK10429 melibiose:sodium symp 98.7 3.4E-06 7.3E-11 81.3 20.9 135 51-191 245-392 (473)
208 PRK11652 emrD multidrug resist 98.7 5.2E-06 1.1E-10 78.1 21.5 117 65-190 236-358 (394)
209 TIGR00895 2A0115 benzoate tran 98.7 7.2E-07 1.6E-11 83.8 15.6 126 53-188 266-396 (398)
210 PRK06814 acylglycerophosphoeth 98.7 2.5E-06 5.4E-11 91.5 21.0 141 56-207 244-410 (1140)
211 PF02487 CLN3: CLN3 protein; 98.7 5.8E-06 1.3E-10 75.8 20.2 296 75-398 62-383 (402)
212 PF03209 PUCC: PUCC protein; 98.6 1.6E-05 3.4E-10 72.3 22.5 177 40-218 211-397 (403)
213 TIGR00881 2A0104 phosphoglycer 98.6 1.7E-06 3.6E-11 80.7 17.2 135 55-201 234-379 (379)
214 KOG0637 Sucrose transporter an 98.6 1.4E-06 3.1E-11 79.3 14.5 125 50-175 45-196 (498)
215 TIGR02332 HpaX 4-hydroxyphenyl 98.6 2.5E-06 5.5E-11 80.7 16.9 146 53-208 258-410 (412)
216 KOG3764 Vesicular amine transp 98.6 6.1E-07 1.3E-11 80.3 11.5 162 48-216 281-451 (464)
217 KOG4686 Predicted sugar transp 98.5 1.8E-06 3.9E-11 73.7 12.5 169 37-216 261-440 (459)
218 KOG0569 Permease of the major 98.5 1.8E-05 3.8E-10 74.6 20.4 153 63-226 296-461 (485)
219 KOG2504 Monocarboxylate transp 98.5 1.1E-06 2.4E-11 84.3 12.5 158 48-216 309-473 (509)
220 TIGR00885 fucP L-fucose:H+ sym 98.5 2.9E-05 6.3E-10 73.3 21.7 146 55-211 250-404 (410)
221 TIGR00769 AAA ADP/ATP carrier 98.5 0.00031 6.8E-09 66.5 28.2 248 62-317 28-338 (472)
222 PRK11462 putative transporter; 98.5 7.2E-05 1.6E-09 71.8 24.4 82 70-152 261-345 (460)
223 PF06813 Nodulin-like: Nodulin 98.5 1.1E-05 2.4E-10 69.4 16.0 104 65-170 30-143 (250)
224 TIGR00886 2A0108 nitrite extru 98.4 4.9E-06 1.1E-10 77.3 14.5 103 57-161 245-356 (366)
225 TIGR00903 2A0129 major facilit 98.4 8.8E-05 1.9E-09 68.9 22.5 149 51-216 206-362 (368)
226 TIGR00887 2A0109 phosphate:H+ 98.4 6.4E-06 1.4E-10 80.1 15.1 135 80-224 343-493 (502)
227 TIGR00926 2A1704 Peptide:H+ sy 98.4 0.00056 1.2E-08 67.9 28.4 147 65-217 16-180 (654)
228 TIGR00924 yjdL_sub1_fam amino 98.4 1.2E-06 2.7E-11 84.1 9.7 145 243-404 6-159 (475)
229 COG0477 ProP Permeases of the 98.4 2.8E-05 6.1E-10 69.8 17.1 152 51-211 16-177 (338)
230 PRK15462 dipeptide/tripeptide 98.3 2.6E-06 5.7E-11 81.2 10.0 140 246-402 9-154 (493)
231 TIGR00788 fbt folate/biopterin 98.3 1.6E-05 3.6E-10 76.3 15.5 120 65-193 281-414 (468)
232 COG0738 FucP Fucose permease [ 98.3 0.00019 4E-09 65.0 19.9 149 48-209 247-399 (422)
233 KOG3762 Predicted transporter 98.3 1.5E-05 3.3E-10 74.2 13.2 108 269-393 393-502 (618)
234 PF06779 DUF1228: Protein of u 98.3 7E-06 1.5E-10 57.1 8.0 77 50-127 5-83 (85)
235 KOG3574 Acetyl-CoA transporter 98.2 0.00049 1.1E-08 61.6 20.3 344 37-399 28-418 (510)
236 KOG3762 Predicted transporter 98.2 1.3E-05 2.8E-10 74.7 10.3 161 48-216 382-544 (618)
237 PRK10207 dipeptide/tripeptide 98.2 6.9E-06 1.5E-10 79.2 8.4 141 246-402 14-159 (489)
238 KOG2532 Permease of the major 98.1 0.00013 2.8E-09 69.4 16.6 156 50-218 271-446 (466)
239 PF05978 UNC-93: Ion channel r 98.1 0.00026 5.7E-09 56.3 14.3 97 78-175 43-142 (156)
240 PRK09584 tppB putative tripept 98.1 1.6E-05 3.4E-10 77.1 8.8 145 242-402 16-166 (500)
241 TIGR00880 2_A_01_02 Multidrug 97.9 4.2E-06 9.1E-11 65.7 2.1 97 288-401 6-102 (141)
242 TIGR01301 GPH_sucrose GPH fami 97.9 0.0038 8.2E-08 59.6 22.2 137 78-223 311-475 (477)
243 KOG0253 Synaptic vesicle trans 97.9 5.8E-05 1.3E-09 67.2 7.8 126 81-223 390-523 (528)
244 KOG1330 Sugar transporter/spin 97.8 1.6E-05 3.5E-10 72.8 4.0 107 281-404 69-175 (493)
245 KOG3810 Micronutrient transpor 97.8 0.0013 2.9E-08 58.3 15.4 305 66-397 35-373 (433)
246 KOG2533 Permease of the major 97.8 0.00026 5.7E-09 67.6 11.5 63 54-117 290-359 (495)
247 TIGR00806 rfc RFC reduced fola 97.7 9.6E-05 2.1E-09 69.1 6.6 102 282-401 64-165 (511)
248 COG3104 PTR2 Dipeptide/tripept 97.6 0.00024 5.1E-09 66.2 7.7 147 242-404 16-173 (498)
249 PF00854 PTR2: POT family; In 97.4 0.0022 4.7E-08 59.8 12.2 106 103-216 2-120 (372)
250 KOG2615 Permease of the major 97.4 0.0012 2.6E-08 59.4 9.0 100 282-402 70-172 (451)
251 PTZ00207 hypothetical protein; 97.3 0.00082 1.8E-08 65.6 7.6 127 259-400 40-169 (591)
252 PF03219 TLC: TLC ATP/ADP tran 97.2 0.22 4.7E-06 47.9 28.3 82 234-317 268-354 (491)
253 KOG3097 Predicted membrane pro 97.1 0.12 2.6E-06 45.9 18.2 98 82-180 68-179 (390)
254 PF06609 TRI12: Fungal trichot 97.0 0.11 2.4E-06 50.9 19.5 105 73-178 350-461 (599)
255 TIGR00939 2a57 Equilibrative N 97.0 0.072 1.6E-06 50.6 17.8 50 349-398 371-420 (437)
256 KOG0254 Predicted transporter 96.9 0.00083 1.8E-08 65.5 4.3 103 283-402 92-194 (513)
257 KOG0252 Inorganic phosphate tr 96.9 0.023 4.9E-07 52.8 12.6 107 282-398 86-192 (538)
258 TIGR00805 oat sodium-independe 96.9 0.00059 1.3E-08 68.0 2.8 120 281-402 69-224 (633)
259 KOG2563 Permease of the major 96.8 0.029 6.3E-07 51.9 12.3 88 65-153 294-387 (480)
260 PF07672 MFS_Mycoplasma: Mycop 96.5 0.041 8.8E-07 47.2 10.8 61 196-256 39-104 (267)
261 KOG2601 Iron transporter [Inor 96.5 0.089 1.9E-06 47.5 13.0 75 35-110 25-101 (503)
262 PF00083 Sugar_tr: Sugar (and 96.4 0.00024 5.1E-09 68.2 -3.4 107 282-402 48-154 (451)
263 KOG0255 Synaptic vesicle trans 96.4 0.0083 1.8E-07 58.7 6.9 92 282-390 120-211 (521)
264 PRK03612 spermidine synthase; 96.4 0.7 1.5E-05 45.1 19.7 38 65-102 43-80 (521)
265 KOG3880 Predicted small molecu 96.2 0.085 1.8E-06 46.4 11.2 136 74-220 64-200 (409)
266 KOG2816 Predicted transporter 95.9 0.52 1.1E-05 45.1 16.0 107 65-173 270-381 (463)
267 KOG1479 Nucleoside transporter 95.9 0.88 1.9E-05 42.2 16.5 93 289-391 292-384 (406)
268 PF13000 Acatn: Acetyl-coenzym 95.8 1.8 3.9E-05 41.2 19.5 40 361-400 416-455 (544)
269 PF12832 MFS_1_like: MFS_1 lik 95.3 0.2 4.3E-06 34.5 8.0 50 269-321 22-74 (77)
270 PF06813 Nodulin-like: Nodulin 95.1 0.18 3.8E-06 43.8 9.1 127 258-398 14-143 (250)
271 KOG3098 Uncharacterized conser 94.6 4.3 9.4E-05 38.6 18.8 97 66-163 272-393 (461)
272 PF03092 BT1: BT1 family; Int 94.6 0.45 9.8E-06 45.3 11.2 95 66-161 246-354 (433)
273 PF05978 UNC-93: Ion channel r 94.5 0.068 1.5E-06 42.6 4.6 91 290-398 47-137 (156)
274 KOG1237 H+/oligopeptide sympor 93.4 4.2 9E-05 40.2 15.5 144 65-216 66-242 (571)
275 KOG2325 Predicted transporter/ 93.1 0.083 1.8E-06 50.1 3.2 100 282-393 73-172 (488)
276 COG3202 ATP/ADP translocase [E 91.8 12 0.00027 35.7 26.9 247 59-313 45-353 (509)
277 PF02487 CLN3: CLN3 protein; 89.6 8.9 0.00019 35.9 12.5 104 71-183 280-392 (402)
278 PF06963 FPN1: Ferroportin1 (F 89.5 13 0.00027 35.4 13.6 108 65-173 286-407 (432)
279 KOG0637 Sucrose transporter an 87.5 0.68 1.5E-05 43.4 3.8 156 247-404 33-197 (498)
280 PF13386 DsbD_2: Cytochrome C 87.2 16 0.00035 30.5 16.0 30 163-192 34-63 (199)
281 COG2119 Predicted membrane pro 85.1 19 0.00041 29.3 10.8 69 44-114 107-176 (190)
282 PF05631 DUF791: Protein of un 85.0 31 0.00067 31.6 13.7 93 281-391 70-167 (354)
283 TIGR00926 2A1704 Peptide:H+ sy 83.0 0.86 1.9E-05 45.7 2.5 113 282-402 25-140 (654)
284 PF01770 Folate_carrier: Reduc 82.6 44 0.00095 31.5 13.6 105 48-153 258-368 (412)
285 KOG3810 Micronutrient transpor 81.4 29 0.00064 31.8 11.0 105 48-153 245-354 (433)
286 COG0477 ProP Permeases of the 80.4 6.1 0.00013 34.7 7.0 97 282-393 41-138 (338)
287 PF06779 DUF1228: Protein of u 78.9 20 0.00043 25.2 7.7 59 269-330 14-75 (85)
288 PF01733 Nucleoside_tran: Nucl 78.4 0.81 1.8E-05 41.4 0.6 114 285-403 187-301 (309)
289 KOG4830 Predicted sugar transp 76.7 3.8 8.2E-05 35.5 3.9 58 48-106 28-95 (412)
290 TIGR00939 2a57 Equilibrative N 71.6 67 0.0015 30.7 11.5 100 74-175 309-425 (437)
291 KOG4332 Predicted sugar transp 66.5 94 0.002 27.5 11.8 78 74-152 284-371 (454)
292 COG3202 ATP/ADP translocase [E 59.5 51 0.0011 31.7 7.9 118 282-401 63-199 (509)
293 PF06800 Sugar_transport: Suga 59.4 1.3E+02 0.0027 26.6 13.9 81 9-97 107-187 (269)
294 KOG1479 Nucleoside transporter 54.0 1.8E+02 0.004 27.4 10.4 76 74-151 284-369 (406)
295 COG5336 Uncharacterized protei 53.3 80 0.0017 23.2 6.2 43 283-326 45-87 (116)
296 PF03137 OATP: Organic Anion T 52.6 3.3 7.1E-05 40.7 -1.0 119 281-402 39-193 (539)
297 KOG3626 Organic anion transpor 46.3 2.8E+02 0.006 28.6 11.0 57 57-114 412-473 (735)
298 PRK11469 hypothetical protein; 44.6 1.8E+02 0.0039 24.0 11.9 31 87-117 150-180 (188)
299 TIGR01667 YCCS_YHJK integral m 44.0 2.2E+02 0.0049 29.2 10.2 49 91-139 42-96 (701)
300 TIGR01666 YCCS hypothetical me 43.8 2.5E+02 0.0055 28.8 10.5 48 92-139 43-96 (704)
301 COG2836 Uncharacterized conser 43.3 2.1E+02 0.0045 24.4 13.5 35 281-315 165-199 (232)
302 COG5336 Uncharacterized protei 43.2 78 0.0017 23.2 4.9 25 75-99 45-69 (116)
303 TIGR00688 rarD rarD protein. T 37.6 2.7E+02 0.0059 24.1 12.2 48 68-117 93-140 (256)
304 PF02694 UPF0060: Uncharacteri 32.4 1.2E+02 0.0026 22.3 4.5 48 70-117 52-99 (107)
305 COG1268 BioY Uncharacterized c 30.4 1.5E+02 0.0032 24.5 5.4 22 80-101 90-111 (184)
306 PF02990 EMP70: Endomembrane p 30.3 5.4E+02 0.012 25.4 11.8 22 285-306 302-323 (521)
307 PF11947 DUF3464: Protein of u 29.6 82 0.0018 25.0 3.6 30 368-397 112-141 (153)
308 PRK11588 hypothetical protein; 29.5 5.5E+02 0.012 25.2 17.9 34 92-125 136-172 (506)
309 PRK11689 aromatic amino acid e 28.8 4.2E+02 0.0091 23.6 11.7 45 68-114 88-132 (295)
310 PF15061 DUF4538: Domain of un 27.6 1E+02 0.0022 19.7 3.1 23 196-218 4-26 (58)
311 PF09930 DUF2162: Predicted tr 27.5 3.9E+02 0.0085 22.8 10.2 50 65-117 124-173 (224)
312 PRK02237 hypothetical protein; 27.0 2E+02 0.0044 21.2 4.9 45 72-116 56-100 (109)
313 COG2119 Predicted membrane pro 27.0 3.6E+02 0.0078 22.2 13.6 31 290-322 144-174 (190)
314 PF07672 MFS_Mycoplasma: Mycop 26.7 4.5E+02 0.0097 23.2 9.6 59 80-138 149-218 (267)
315 KOG3097 Predicted membrane pro 25.4 3.5E+02 0.0075 25.0 7.1 21 351-371 111-131 (390)
316 PRK02237 hypothetical protein; 24.7 2.9E+02 0.0063 20.4 7.0 47 281-329 57-103 (109)
317 PF02632 BioY: BioY family; I 24.6 2.3E+02 0.0049 22.4 5.4 24 80-103 61-84 (148)
318 PF11511 RhodobacterPufX: Intr 24.2 1E+02 0.0022 20.3 2.7 30 196-225 29-58 (67)
319 PF03817 MadL: Malonate transp 23.5 3.3E+02 0.0071 20.5 6.2 27 77-103 93-119 (125)
320 COG1288 Predicted membrane pro 23.2 6.7E+02 0.015 24.0 12.1 21 196-216 217-237 (481)
321 PF02694 UPF0060: Uncharacteri 23.0 3.2E+02 0.0068 20.2 6.4 47 281-329 55-101 (107)
322 PRK03612 spermidine synthase; 20.6 8.2E+02 0.018 24.1 10.5 26 281-306 51-76 (521)
323 COG4711 Predicted membrane pro 20.1 5.3E+02 0.011 21.6 7.6 9 63-71 183-191 (217)
No 1
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=291.08 Aligned_cols=408 Identities=80% Similarity=1.329 Sum_probs=363.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHhccccccCCCCccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHH
Q 014905 1 MESFYFVVFACLAALVVAMELSKNSKDRIGTSSSFNSFMNSYIIVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIA 80 (416)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~ 80 (416)
|+.+++.++.++..+++.+++.|.++++.+.++.+.+++.+++.++.+...+||++.||++.+|+++|+...++|.++.+
T Consensus 1 MevfyylvFggl~a~vagLELSk~nkdRintsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfia 80 (454)
T KOG4332|consen 1 MEVFYYLVFGGLAAVVAGLELSKCNKDRINTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIA 80 (454)
T ss_pred CeeeehHHHHHHHHHHHHhhhhhcccccccCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeec
Confidence 78899999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcc
Q 014905 81 GFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCVTKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFD 159 (416)
Q Consensus 81 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~ 159 (416)
.....+++..+.|.++||-|||+..+.-++.+.++++.-.++.+-.++++|.+.|++.+..+.+..+|++.|+ ++|+..
T Consensus 81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe 160 (454)
T KOG4332|consen 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE 160 (454)
T ss_pred ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence 9999999999999999999999999999999999999888999999999999999999999999999999999 699999
Q ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCc-cchhhHHHhhhH
Q 014905 160 QQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDP-EKKNLLAQFKGA 238 (416)
Q Consensus 160 ~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 238 (416)
..|++..++-+..+|+.+.++++++.+..+.++++.|...+|...+....+...+...-+.|+..++ +.++..++.+..
T Consensus 161 qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~ga 240 (454)
T KOG4332|consen 161 QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGA 240 (454)
T ss_pred HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHh
Confidence 9999999999999999999999999999999988888999999988888888777776788887654 334444556667
Q ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHH
Q 014905 239 ALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIV 318 (416)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~ 318 (416)
.+.+..|+++.++.....+++..+|.+++.|.|....+..+.+.|.+++.++++.++|+-+..|+..|.+.+....+.+.
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv 320 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV 320 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence 77788899999999999999999999999999999988888999999999999999999999988887545566677777
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 319 FIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
..+....+.++......+ |++ + +....++.++++..+.|..+|.+.-+-.+..|++.|++.+.+++++.|++
T Consensus 321 f~vs~a~l~Lpilt~~vs--P~k--e----s~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnif 392 (454)
T KOG4332|consen 321 FLVSIAALLLPILTSSVS--PSK--E----SPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIF 392 (454)
T ss_pred HHHHHHHHHHHHHHhccC--CCc--C----CchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHh
Confidence 777776666655544322 221 1 33456889999999999999999999999999999999999999999999
Q ss_pred eeeeee-----------cccccccccccC
Q 014905 399 VCIVLY-----------NVSFDQCFVFIH 416 (416)
Q Consensus 399 ~~~~~~-----------~~~f~~~~~~~~ 416 (416)
++++++ +++|.+|+.+++
T Consensus 393 vClvLynlh~~~~p~~tr~mf~icS~~~~ 421 (454)
T KOG4332|consen 393 VCLVLYNLHVDAFPTTTRNMFGICSAFLF 421 (454)
T ss_pred hhhhheecccccCccccchhhhhhHHHHH
Confidence 999999 489999997653
No 2
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=1.1e-36 Score=266.30 Aligned_cols=330 Identities=61% Similarity=1.057 Sum_probs=290.6
Q ss_pred hhHHHHHHHHHHHHHHHHhccccccCCCCccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHH
Q 014905 4 FYFVVFACLAALVVAMELSKNSKDRIGTSSSFNSFMNSYIIVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG 83 (416)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~ 83 (416)
++...+..+..+++.+++.++++++.++++.+++++|+++..+.+...+||+++||++.+|+++|+++.|++.++...+.
T Consensus 1 ~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~ 80 (354)
T PF05631_consen 1 FYYLVFGVLAAVCAALELSKRTKDRASTNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFA 80 (354)
T ss_pred CchhHHHHHHHHHHHHheecccccccccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHH
Confidence 45677888888999999988888888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhH
Q 014905 84 SSMLFGTLVGSLADKQGRKRACVTYCITYMLSCVTKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWL 163 (416)
Q Consensus 84 ~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~ 163 (416)
..++..++.|.++||+|||+..+..+++..+++++-..++++.++++|++.|++.+..+.+..+|++.|+++|+....++
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999999999999999999999999999999997788999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc-chhhHHHhhhHHHhh
Q 014905 164 SETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPE-KKNLLAQFKGAALAI 242 (416)
Q Consensus 164 ~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 242 (416)
+..+......++++.++.++.+++.+.+..+.|...||....++..++.+++...++|++.+.+ +++..++.++..+.+
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i 240 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAI 240 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHH
Confidence 8888877767788888999999999888774466899999999999999888878999887633 233345566778888
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHH
Q 014905 243 ASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIIS 322 (416)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 322 (416)
.+||+++.+.....+++.++|.+++.|.|.+..++.+.+.|++++.++++.++|+.+.+++..|. .+..+.+.....+.
T Consensus 241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~-~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS-LRPESLLRYVFAVA 319 (354)
T ss_pred HcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999777778999999999999999999998776653 66666676666666
Q ss_pred HHHHHHHHHhhc
Q 014905 323 SASLLIPILTNF 334 (416)
Q Consensus 323 ~~~~~~~~~~~~ 334 (416)
.+++.++.....
T Consensus 320 a~~l~~pv~~~~ 331 (354)
T PF05631_consen 320 AVSLAIPVVTHI 331 (354)
T ss_pred HHHHHHHHHHhh
Confidence 666666665543
No 3
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=6.1e-29 Score=229.44 Aligned_cols=313 Identities=15% Similarity=0.114 Sum_probs=209.4
Q ss_pred HhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHH
Q 014905 54 WLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGR 131 (416)
Q Consensus 54 ~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r 131 (416)
....|.+ |.+ +|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.. ....++++.+++.|
T Consensus 8 ~~~~~~l-p~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 86 (368)
T TIGR00903 8 VTFSPVL-SLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQ 86 (368)
T ss_pred HHHHhhH-HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3456677 555 89999999999999999999999999999999999999987766555555444 33336899999999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 132 IFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
+++|++.+.. .+... .++|+ ++|++..+.. ..+..+|. .+++.++..+.+.. |||..|.+.+++.
T Consensus 87 ~l~G~g~~~~-~~~~~-~~~~~~~~~~r~~a~~~~----~~~~~lG~----~l~~~~~~~l~~~~--gWr~~f~~~~~l~ 154 (368)
T TIGR00903 87 LLAALGQPFL-LNAFA-PAASQIREERRDLVISLL----SFAMYLGI----IFALAAGLKIYTAG--GLQLLIIPIAAVA 154 (368)
T ss_pred HHHHhHhHHH-HHHHH-HHHHHcCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHcc--chHHHHHHHHHHH
Confidence 9999999864 44444 44554 6777774444 34444445 66666666666665 9999999988887
Q ss_pred HHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc--hHHHH
Q 014905 209 AFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP--HGFIF 286 (416)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~ 286 (416)
++..++.++..||++++++++...++..+++++++|||.++.+....++.....+.+.. |.|.|+++. +.+ .+...
T Consensus 155 ~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~-wlp~~L~~~-g~s~~~~~~~ 232 (368)
T TIGR00903 155 AAGIILVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAI-WLEAALRPA-GLEDIAGDAV 232 (368)
T ss_pred HHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHC-CCChHHHHHH
Confidence 77777676678887654322111112223577889999999988888887888877655 999999763 343 33333
Q ss_pred HHHHHHHHHhhHHHHHHhhccc-ccchhHHHH-HHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhh
Q 014905 287 ATFMLASMLGSSFASRLLAHSS-LRVESYMQI-VFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACV 364 (416)
Q Consensus 287 ~~~~~~~~~~~~~~~~l~~r~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 364 (416)
....+...++ .+++.||.+ .+.|+.... ......+.+... .... +.+.......+.+++.
T Consensus 233 ~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~-~~~~--------------~~~~~~~~~~l~~~~~ 294 (368)
T TIGR00903 233 ALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLAL-AFEL--------------NRLALFAFIGIAGLLM 294 (368)
T ss_pred HHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH-HHcc--------------ccHHHHHHHHHHHHhh
Confidence 3334433333 456666642 122232222 222222112111 1111 2233344555566666
Q ss_pred hcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 365 GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 365 g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
....+..+++.+|.+|++.||++.|+.+...++..
T Consensus 295 ~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~ 329 (368)
T TIGR00903 295 LPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAIS 329 (368)
T ss_pred hhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHH
Confidence 66777888999999999999999999988777654
No 4
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=7.6e-29 Score=230.41 Aligned_cols=330 Identities=14% Similarity=0.099 Sum_probs=238.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc
Q 014905 43 IIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH 120 (416)
Q Consensus 43 ~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~ 120 (416)
+...++...++.+..+.+ |.| ++.+.|+.++|++.+++.++..+++++.|+++||+|||+++..+.....++.. ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 5 FAAQLISLIGTAITQVAL-PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 344446777788888887 777 78999999999999999999999999999999999999999999877766655 555
Q ss_pred ch-----hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 014905 121 SS-----EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT 192 (416)
Q Consensus 121 ~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~ 192 (416)
.+ +++.+++.|++.|++.+...+...+ ++.|. ++|++..++. +.+..+|. .++|.+++.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~g~----~~g~~l~~~l~~~ 154 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQA-MLPDLVPEEQLTQANSLS----QAVRSLFY----IVGPGIGGLMYAT 154 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHhHH----HHHHHHHH----HHHHHHHHHHHHH
Confidence 55 8999999999999999999888888 88876 5666664444 33344444 6666777777776
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHh-cccCCCCccch---hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILAS-WTENYGDPEKK---NLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFL 268 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
. +||..|++.++..++..+..... .||++++++++ +.+++.++..++.+|+|+++.......+...........
T Consensus 155 ~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (365)
T TIGR00900 155 L--GIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVA 232 (365)
T ss_pred h--hHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 99999998877766665554433 23332211111 112334456777888888877766555555555443424
Q ss_pred hhcccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 014905 269 WTPALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGG 345 (416)
Q Consensus 269 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (416)
+.|.+.++..+. ..+.......++.+++.++.+++.|| .++++....+.....+..........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 299 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY--FKRMALMTGAIFVIGLAILVVGLTPP----------- 299 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--hchhHHHHHHHHHHHHHHHHHHhhch-----------
Confidence 778887753333 36778888889999999999999999 66666555544444433333322220
Q ss_pred cccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 346 ISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 346 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
+.+...+..++.+++.+...+...++..|.+|+|+|++++|+.+...++...
T Consensus 300 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 300 ---NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 1455667778888888888999999999999999999999998877766543
No 5
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.5e-28 Score=219.11 Aligned_cols=321 Identities=15% Similarity=0.198 Sum_probs=240.8
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHH
Q 014905 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKI 126 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~ 126 (416)
.....+.+..+.++++-+|+|.|..+.|++.+.|.++..+++|+...+.||++||++++....++.++.+ +++++||+.
T Consensus 24 ~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~ 103 (394)
T COG2814 24 AIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAV 103 (394)
T ss_pred HHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 4555666777888555599999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA 203 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~ 203 (416)
++++|++.|+..|.+++...+ +..+. +||+++.+.+ ..|..++. ++|..++.++.+.+ |||.+|+.
T Consensus 104 Ll~aR~~~g~a~G~f~~i~~~-~a~~lvpp~~~~~Aiaiv----~~G~tlA~----v~GvPLGt~ig~~~--GWR~~F~~ 172 (394)
T COG2814 104 LLLARALAGLAHGVFWSIAAA-LAARLVPPGKRGRALALV----FTGLTLAT----VLGVPLGTFLGQLF--GWRATFLA 172 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCccchhhHHHHH----HHHHHHHH----HHhccHHHHHHHHh--hHHHHHHH
Confidence 999999999999999987777 76655 7888885555 33333333 66778888888887 99999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc--
Q 014905 204 AACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-- 281 (416)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (416)
.+.+.++..+..+...|++ +.+++ ++....+..+.+|+|+++.......+...+.+...+ |...++++..+.+
T Consensus 173 ia~l~ll~~~~~~~~lP~~--~~~~~--~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ft-Yi~P~L~~v~g~s~~ 247 (394)
T COG2814 173 IAVLALLALLLLWKLLPPS--EISGS--LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYT-YIRPFLESVAGFSVS 247 (394)
T ss_pred HHHHHHHHHHHHHHhCCCc--cCCCC--CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHH-hHHHHHHHccCCCHh
Confidence 9999999999888778811 11111 111222345678899988887777777666666444 6667777766554
Q ss_pred -hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHH
Q 014905 282 -HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTF 360 (416)
Q Consensus 282 -~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (416)
.+++...++++..+|..+.||+.|| +.++.+.....+.......+.+... +.+.......+.
T Consensus 248 ~vs~~Ll~~Gv~~~~Gn~~gGrl~dr---~~~~~l~~~~~l~a~~~l~l~~~~~--------------~~~~~~~~~~~w 310 (394)
T COG2814 248 AVSLVLLAFGIAGFIGNLLGGRLADR---GPRRALIAALLLLALALLALTFTGA--------------SPALALALLFLW 310 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc---cchhHHHHHHHHHHHHHHHHHHhcc--------------hHHHHHHHHHHH
Confidence 7888888899999999999999999 3555555554555545554444443 445555555555
Q ss_pred HHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 361 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 361 ~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
++..............+ .-+|.+..+.++.....|+....|
T Consensus 311 g~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 311 GFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALG 351 (394)
T ss_pred HHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHH
Confidence 66555555555555556 335678888888888777765443
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.2e-28 Score=215.42 Aligned_cols=342 Identities=13% Similarity=0.090 Sum_probs=254.2
Q ss_pred CccchhhhHHHHHHHHHHHHHHHhH----HHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHH
Q 014905 32 SSSFNSFMNSYIIVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVT 107 (416)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~ 107 (416)
++.+++||.+.++..++...+.++. ....+.+.++.++|.+|+|.+.+.+++.+.++....|.++||.+.|+.+-+
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 3456677766666655544444332 223323348888999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHH
Q 014905 108 YCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISG 183 (416)
Q Consensus 108 ~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~ 183 (416)
++++.++..+ .+++++.+.+.+..++.|...|.-.|++.. .++.+ ++||... +.++....+|. .+.|
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~----siWn~shNiGG----al~~ 170 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCAR-TITHWFSRKERGTWW----SIWNTSHNIGG----ALAP 170 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHH-HHHHHcCccccCceE----EEehhhhhccc----chHH
Confidence 9999999999 999999999999999999999999999999 88866 7788874 45555555556 3334
Q ss_pred HHH--HHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCc----------cchhh--HHHhh-------hHHHhh
Q 014905 184 LFG--NLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDP----------EKKNL--LAQFK-------GAALAI 242 (416)
Q Consensus 184 ~l~--~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--~~~~~-------~~~~~~ 242 (416)
.+. +....+. +||..|++.+++.++..++.++..+|+|++. ++.+. +++.. .-.+.+
T Consensus 171 ~~~~la~~~~~~--~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YV 248 (448)
T COG2271 171 LVALLAFFAFHG--GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYV 248 (448)
T ss_pred HHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHH
Confidence 444 6666665 9999999999999998888887777776532 01110 11111 134567
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHH
Q 014905 243 ASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVF 319 (416)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~ 319 (416)
++||.+|.+++...+....-+.... |.|.|+.|..+.+ .+...+.+=.+.+.|+++.|+++||...+.|.+..+.+
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~d-W~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~ 327 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGIND-WGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF 327 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHH
Confidence 8999999999999999999999666 9999999987775 78888888999999999999999998334444554444
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 320 IISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
.+........ ..... +. |.+...+++...|+..-...-.+-....|..|++.-|++.|+......+
T Consensus 328 ~~~i~~~~~~-~w~~~-------~~----~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl 393 (448)
T COG2271 328 MLLITASLVL-YWLAP-------NG----SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYL 393 (448)
T ss_pred HHHHHHHHHH-HHcCC-------Cc----cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHH
Confidence 4433232222 22210 00 4466666666677665555556666778999999999999998776666
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=8.9e-28 Score=225.17 Aligned_cols=312 Identities=13% Similarity=0.114 Sum_probs=220.3
Q ss_pred HhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 54 ~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
....|.++++.+++|.|++++|++.+.+.++..+++++.|+++||+||||++..+.....++.+ +.+++|++.+++.|+
T Consensus 26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 105 (390)
T PRK03545 26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI 105 (390)
T ss_pred HHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3455566333389999999999999999999999999999999999999999999999999888 888999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
++|++.+...+...+ ++.|. ++|++..++. ..+..+|. .++|.+++.+.+.. |||+.|++.+++.+
T Consensus 106 ~~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~g~~----~~~~~~g~----~ig~~l~~~l~~~~--gw~~~f~~~~~~~~ 174 (390)
T PRK03545 106 GIAFAHAIFWSITAS-LAIRVAPAGKKAQALSLL----ATGTALAM----VLGLPLGRVIGQYL--GWRTTFLAIGGGAL 174 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCChhhhhhHHHHH----HHHHHHHH----HHHhhHHHHHHHHh--cHHHHHHHHHHHHH
Confidence 999999888887777 77755 6777774444 44444444 77777777777776 99999999988877
Q ss_pred HHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHH
Q 014905 210 FGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIF 286 (416)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~ 286 (416)
+..+......||+++++ ++ ..++.++.+|+|+++.......+.....+.... +.|.+.++..+.+ .+...
T Consensus 175 l~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~s~~~~~~~~ 247 (390)
T PRK03545 175 ITLLLLIKLLPLLPSEH-SG-----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYS-YIEPFVQQVAGLSENFATLLL 247 (390)
T ss_pred HHHHHHHHhCCCCCCCC-cc-----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCccHHHHHH
Confidence 77666554555543221 11 123456778888776554444443333333233 6666666544443 67777
Q ss_pred HHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014905 287 ATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI 366 (416)
Q Consensus 287 ~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 366 (416)
....++.+++..+.+++.|| .+.+ .+.....+............. +.+.......+.+++.+.
T Consensus 248 ~~~~~~~~~g~~~~g~l~dr--~~~~-~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~l~g~~~~~ 310 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRLGNR--HPSG-FLLIAIALLLVCLLLLLPAAN--------------SEWHLSVLSIFWGIAIMC 310 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhc--cchh-HHHHHHHHHHHHHHHHHHHhc--------------hHHHHHHHHHHHHHHHhc
Confidence 88889999999999999999 5543 344443333333322222221 345555666677777766
Q ss_pred chhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 367 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 367 ~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
..+.....+.|..| +.|++++|+.+...++...+
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 311 IGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred chHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH
Confidence 67777788888777 57899998887666654433
No 8
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=4.1e-27 Score=223.40 Aligned_cols=318 Identities=15% Similarity=0.174 Sum_probs=200.1
Q ss_pred HHhHHHHHHHHH-HHcC---CChhh---HHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhH
Q 014905 53 DWLQGPYVYYLY-STYG---FGKGE---IGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEY 124 (416)
Q Consensus 53 ~~~~~~~l~~l~-~~~~---~s~~~---~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~ 124 (416)
|....++..|.. ++++ .+..+ ++.+++..+++..+++++.|+++||+||||++..+...++++.+ +++++++
T Consensus 37 d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (432)
T PRK10406 37 DFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGY 116 (432)
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 333344443544 6764 45554 45556666777779999999999999999999999999998888 7777765
Q ss_pred --------HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHH----
Q 014905 125 --------KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLL---- 189 (416)
Q Consensus 125 --------~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~---- 189 (416)
..+++.|+++|++.|...+...+ +++|. ++|++..+.. ..+...|..++..+.+.+....
T Consensus 117 ~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~~p~~~rg~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~ 191 (432)
T PRK10406 117 ETIGTWAPALLLLARLFQGLSVGGEYGTSAT-YMSEVAVEGRKGFYASFQ----YVTLIGGQLLALLVVVVLQQTLEDAE 191 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH-HHHHhCCCCcccHHHHHH----HHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 36899999999999999999998 99987 6666653333 3334444422223333332221
Q ss_pred HhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHH-HHHHHHHHHh
Q 014905 190 VDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLF-EGSMYTFVFL 268 (416)
Q Consensus 190 ~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 268 (416)
.+. +|||.+|++.++..++..++ ....||+++.++ + +++++.++++++|+|+.+.......+. +...+.+..
T Consensus 192 ~~~--~gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~~~-~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 264 (432)
T PRK10406 192 LRE--WGWRIPFALGAVLAVVALWL-RRQLDETSQQET-R--ALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTT- 264 (432)
T ss_pred Hhc--cchHHHHHHHHHHHHHHHHH-HhcCCCCchHHH-h--hhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 123 39999999888776655433 224555543211 1 111233577788888777665544443 455565444
Q ss_pred hhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHH-hhccCCCCCCCCC
Q 014905 269 WTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPIL-TNFLETPPDVRGG 344 (416)
Q Consensus 269 ~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 344 (416)
|.|.|.++..+.+ .+...+...+...++..+.+++.|| .++|+.......+..+....... .... .
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~ 334 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK--IGRRTSMLCFGSLAALFTVPILSALQNV--------S 334 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCchHHHHHHHHHHHHHHHHHHHHHHcC--------C
Confidence 8999987655553 4566666667777888899999999 67666655544433222211111 1110 0
Q ss_pred CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccc
Q 014905 345 GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 396 (416)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~ 396 (416)
+.........+..+..+...+....+.+|.+|+|.|++++|+.+...+
T Consensus 335 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 335 ----SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVAN 382 (432)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHH
Confidence 112222222223334444455677888999999999999999865444
No 9
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=5.1e-27 Score=221.36 Aligned_cols=326 Identities=14% Similarity=0.101 Sum_probs=212.4
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
..........+.. |.+ +++|.|+.+.|++.+...++..+++++.|+++||+|||+++..+.+..+++.+ ..+.++++
T Consensus 23 ~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 101 (405)
T TIGR00891 23 LDAFDFFLVALVL-AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYI 101 (405)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4445555666666 445 89999999999999999999999999999999999999999999888888887 77889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|++.|++.+...+...+ ++.|. ++|++..++.+ .+..+|. .+++.+++.+.+..+.+||+.|.
T Consensus 102 ~l~~~~~l~G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~----~~~~~g~----~~~~~l~~~l~~~~~~~w~~~f~ 172 (405)
T TIGR00891 102 TMFIARLVIGIGMGGEYGSSAA-YVIESWPKHLRNKASGLLI----SGYAVGA----VVAAQVYSLVVPVWGDGWRALFF 172 (405)
T ss_pred HHHHHHHHHHhhhhhhhHHHHH-HHHHhCChhhhhHHHHHHH----HHHHHHH----HHHHHHHHHHHHhcCccHHHHHH
Confidence 9999999999999999888888 88766 66777644443 3333444 55556666666554224999998
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhh----------------------cchh-HHHHHHHHHHHH
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIA----------------------SDER-IALLGAIQSLFE 259 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~~~~~ 259 (416)
+.++..++..+.. ...||+++.+++++.+++.++..++.. +++. .........+..
T Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (405)
T TIGR00891 173 ISILPIIFALWLR-KNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFAN 251 (405)
T ss_pred HHHHHHHHHHHHH-HhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHH
Confidence 8766555544333 345654422111110000000000000 0011 111112222222
Q ss_pred HHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 014905 260 GSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLE 336 (416)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (416)
..... ...+.|.|..+..+.+ .+.+.+...++.+++.++.+++.|| .+.|+.+...................
T Consensus 252 ~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~-- 326 (405)
T TIGR00891 252 LYSHP-IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW--LGRRKAYVCSLLAGQLLIIPVFAIGA-- 326 (405)
T ss_pred HHHhh-hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCchhhhHHHHHHHHHHHHHHHHhCC--
Confidence 22222 2236777776554543 6777778889999999999999999 77777666555443222222211111
Q ss_pred CCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 337 TPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.+.......+.++..+...+....+++|.+|+++|++++|+.+...++...+
T Consensus 327 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 379 (405)
T TIGR00891 327 ------------NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGAL 379 (405)
T ss_pred ------------chHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHH
Confidence 33334444455566666667778889999999999999999987766665443
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=5.6e-27 Score=221.17 Aligned_cols=321 Identities=17% Similarity=0.145 Sum_probs=217.2
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHH
Q 014905 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILML 129 (416)
Q Consensus 51 ~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~ 129 (416)
.......+..+++.+++|.|++++|++.+...++..+++++.|+++||+|||+++..+.+...++.+ ..+.++++.+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (406)
T PRK11551 29 LDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLV 108 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3334455555333389999999999999999999999999999999999999999999888888777 778899999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAAC 206 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~ 206 (416)
.|++.|++.+...+...+ ++.|. ++|++..++. ..+..+|. .+++.++..+.+.. +||..|++.++
T Consensus 109 ~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~----~~~~~~~~~~~~~~--~~~~~~~~~~~ 177 (406)
T PRK11551 109 ARLLTGVGLGGALPNLIA-LTSEAVGPRLRGTAVSLM----YCGVPFGG----ALASVIGVLAAGDA--AWRHIFYVGGV 177 (406)
T ss_pred HHHHHHhhHHHHHHHHHH-HHHHHcCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHcccc--CHHHHHHHHHH
Confidence 999999999988888888 88876 5677764444 33334444 66666666666655 89999998877
Q ss_pred HHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcc---hhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC---
Q 014905 207 FLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASD---ERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI--- 280 (416)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 280 (416)
..++..+......||+++++++++.+++.++..+..+++ ++.........+.....+. ...|.|.+.++. +.
T Consensus 178 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~-g~s~~ 255 (406)
T PRK11551 178 GPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYF-LLNWLPSLLVGQ-GLSRS 255 (406)
T ss_pred HHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhC-CCChh
Confidence 666666555545666553322111111111112222322 2222222222222233333 333778887653 33
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHH
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTF 360 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (416)
..+.......++.++++++.+++.|| .+.++.+..........+....... +.+...+...+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 318 (406)
T PRK11551 256 QAGLVQIAFNIGGALGSLLIGALMDR--LRPRRVVLLIYAGILASLAALAAAP---------------SFAGMLLAGFAA 318 (406)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhcC---------------cHHHHHHHHHHH
Confidence 36788888899999999999999999 6666665553333332322222111 334444555566
Q ss_pred HHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 361 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 361 ~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
++..+...+...++.+|.+|+++|+++.|+.+...++...+
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 359 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMA 359 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHH
Confidence 67666677888899999999999999999988777665443
No 11
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=5.5e-27 Score=225.97 Aligned_cols=330 Identities=13% Similarity=0.026 Sum_probs=236.4
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHH
Q 014905 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKI 126 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~ 126 (416)
+..+...+....++++.+++|.+.++.+++.+.+.++...+.++.|+++||+|||+++..+.....++.+ +..++|++.
T Consensus 17 ~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~ 96 (495)
T PRK14995 17 PVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASW 96 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 4444445666666344489999999999999999999999999999999999999999999999999988 889999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhh----hcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAE----HNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e----~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
++++|+++|++.+...+.... .+.+ .++|++..++. .....+|. .++|.+++.+.++. +||+.|+
T Consensus 97 li~~r~l~G~g~~~~~~~~~~-~l~~~~~~~~~r~~~~g~~----~~~~~~g~----~~gp~lgg~l~~~~--gwr~~f~ 165 (495)
T PRK14995 97 LIATRALLAIGAAMIVPATLA-GIRATFTEEKQRNMALGVW----AAVGSGGA----AFGPLVGGILLEHF--YWGSVFL 165 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHhhccC--ChHHHHH
Confidence 999999999999988876665 4532 25677764333 34444445 77888888888876 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccch-hhHHH--------------------h--------------------------
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKK-NLLAQ--------------------F-------------------------- 235 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------------~-------------------------- 235 (416)
+...+.++..++..+..||++++++++ +.... .
T Consensus 166 i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~ 245 (495)
T PRK14995 166 INVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLA 245 (495)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988887777776665666654322111 10000 0
Q ss_pred -hhH--HHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccc
Q 014905 236 -KGA--ALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSL 309 (416)
Q Consensus 236 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~ 309 (416)
+++ -.+++|+|.+........+.....+.... +.|.|+++..+.+ .|.......++..++.++.+++.|| .
T Consensus 246 ~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r--~ 322 (495)
T PRK14995 246 ASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFEL-LMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR--L 322 (495)
T ss_pred CCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c
Confidence 000 01345666655554444444445555344 7888888765553 7888888899999999999999999 7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeee
Q 014905 310 RVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 389 (416)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g 389 (416)
+.|+.+..+..+..+........... . +.+.......+.|++.+...+.......+.+|+++++++.+
T Consensus 323 g~~~~~~~g~~~~~~~~~~l~~~~~~--------~----~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 323 GLRLVATGGMALSALSFYGLAMTDFS--------T----QQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCC--------C----chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHH
Confidence 76666555554444333322222210 0 33445567778889999888888888999999999999999
Q ss_pred eeecccceeeeeee
Q 014905 390 FFRIPLNVFVCIVL 403 (416)
Q Consensus 390 ~~~~~~~~~~~~~~ 403 (416)
+.+...++...++.
T Consensus 391 ~~~~~~~lG~~~G~ 404 (495)
T PRK14995 391 IETMAYELGAGLGI 404 (495)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888887766544
No 12
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=5.9e-27 Score=219.48 Aligned_cols=322 Identities=15% Similarity=0.101 Sum_probs=230.5
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+...+.....|.+ |.+ +++|.|++++|++.+.+.++..+++++.|+++||+|||+.+..+.....++.+ ....++++
T Consensus 16 ~~~~~~~~~~~~~-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 16 LGPLGIDMYLPAF-PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHHHHHHhcccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 4455667777887 656 89999999999999999999999999999999999999999999888888888 77889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|++.|++.+...+...+ ++.|. ++|++..+.. .....+|. .+++.+++.+.+.. +||..|+
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~g~----~~g~~~~~~l~~~~--~~~~~~~ 163 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQA-LVRDIYPGEELSRIYSIL----MPVLALAP----AVAPLLGGYILVWL--SWHAIFA 163 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHH-HHHHhcCcHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHc--CHHHHHH
Confidence 9999999999999998888888 88876 4566664433 33333444 66667777777765 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc-
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP- 281 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (416)
+.++..++..+......||+++++++++ .++..++.++.+|+|+.+...+...+.....+.... +.|.+.++..+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 241 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLPYEARIQ-ISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFS-GAPFVYIDIMGVSP 241 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcccCC-HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH-cChHHHHHHcCCCH
Confidence 8888777776666655666544332222 233345677788888887776555555555555343 6777776544443
Q ss_pred --hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHH
Q 014905 282 --HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFST 359 (416)
Q Consensus 282 --~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (416)
.+.......++.+++.++.+++.|| .+.++....+.....+............ .. +.........+
T Consensus 242 ~~~g~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~ 309 (385)
T TIGR00710 242 SVFGLLFALNIIAMIFGGFLNGRFIKK--WGAKSLLRMGLILFAVSAVLLEITAILG------LG----SWAMIIGPMMF 309 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHHHhc------cc----hHHHHHHHHHH
Confidence 6777777889999999999999999 7777766655444443333322221100 00 22333444556
Q ss_pred HHHhhhcchhHHHHHHhccCCccccceeeeeeecccc
Q 014905 360 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 396 (416)
Q Consensus 360 ~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~ 396 (416)
.+++.+...+.......|..| ++|+++.++.+...+
T Consensus 310 ~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 345 (385)
T TIGR00710 310 VGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRL 345 (385)
T ss_pred HHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHH
Confidence 677777788888888888877 578999888765543
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=1.2e-26 Score=217.09 Aligned_cols=310 Identities=14% Similarity=0.159 Sum_probs=213.4
Q ss_pred HHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH
Q 014905 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG 130 (416)
Q Consensus 52 ~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~ 130 (416)
.+....+.++++.+++|.|++++|+..+...++..+++++.|+++||+|||+++..+.+..+++.+ ..++++++.+++.
T Consensus 35 ~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (394)
T PRK10213 35 VEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIG 114 (394)
T ss_pred HHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHH
Confidence 334555677444489999999999999999999999999999999999999999999999988888 7788999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACF 207 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~ 207 (416)
|+++|++.+...+...+ ++.|. ++|+++.+.. ..+..+|. .++|.+++.+.+.. +||+.|++.+++
T Consensus 115 r~l~G~~~g~~~~~~~~-~i~~~~~~~~~~~a~~~~----~~~~~~g~----~ig~~l~~~l~~~~--gw~~~f~~~~~l 183 (394)
T PRK10213 115 RACLGLALGGFWAMSAS-LTMRLVPPRTVPKALSVI----FGAVSIAL----VIAAPLGSFLGELI--GWRNVFNAAAVM 183 (394)
T ss_pred HHHHHHhhHHHHHHHHH-HHHHHcCHhHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHhhc--CHHHHHHHHHHH
Confidence 99999999998888888 88766 5566664444 33333444 67777777777776 999999998877
Q ss_pred HHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHH
Q 014905 208 LAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGF 284 (416)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~ 284 (416)
.++..+......||+++++++ .+++.++.+|+|+++.......+.....+.......|.+.++ .+.+ .+.
T Consensus 184 ~~~~~l~~~~~~p~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~ 256 (394)
T PRK10213 184 GVLCIFWIIKSLPSLPGEPSH------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL-AGFGVDGLTL 256 (394)
T ss_pred HHHHHHHHHHHCCCCCccccc------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhHHHH
Confidence 766555544445654322111 112345677888877765544444444444333133666543 3332 677
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhh
Q 014905 285 IFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACV 364 (416)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 364 (416)
.....+++.+++..+.+++.|| .+ ++..................... +.+.......+.+++.
T Consensus 257 ~~~~~~~~~iig~~~~~~l~~r--~~-~~~l~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 257 VLLSFGIASFVGTSLSSFILKR--SV-KLALAGAPLVLAVSALVLTLWGS--------------DKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--cc-hhHHHHHHHHHHHHHHHHHHHhh--------------hHHHHHHHHHHHHHHH
Confidence 7888889999999999999999 33 33333333332222222222222 3455666777888888
Q ss_pred hcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 365 GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 365 g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
+...+...+.+++..|++ +++..+......++
T Consensus 320 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 351 (394)
T PRK10213 320 ALVPVGWSTWITRSLADQ-AEKAGSIQVAVIQL 351 (394)
T ss_pred HhhhHHHHHHHHHHCccc-HHHHHHHHHHHHHH
Confidence 888898898899988854 44555444333333
No 14
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=2e-26 Score=216.09 Aligned_cols=322 Identities=16% Similarity=0.111 Sum_probs=222.4
Q ss_pred HHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchh
Q 014905 47 SLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSE 123 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~ 123 (416)
++...+.....|++ +.+ +++|.|+.++|++.+...+...+.+++.|+++||+|||+++..+.....++.+ ....++
T Consensus 20 ~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 98 (400)
T PRK11646 20 MLVVLGFFVVFPLI-SIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE 98 (400)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 36777778888898 554 78999999999999999999999999999999999999999999999998888 777889
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhH
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAP 200 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~ 200 (416)
++.+++.|+++|++.+...+...+ ++.|. ++|+++.++.+.. ..+|. .++|.+++.+. .. +||+.
T Consensus 99 ~~~l~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~----~~~g~----~ig~~l~g~l~-~~--g~~~~ 166 (400)
T PRK11646 99 PWLLWLSCILSGLGGTLFDPPRTA-LVIKLIRPHQRGRFFSLLMMQ----DSAGA----VIGALLGSWLL-QY--DFRLV 166 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHH----HHHHH----HHHHHHHHHHH-Hh--hHHHH
Confidence 999999999999999888787777 76654 6777775444333 33444 56667777666 33 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC
Q 014905 201 FDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 280 (416)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (416)
|++.++..++..++.....||.+++++ +++.++++++.+++|+++............... ...+.|.|.++..+.
T Consensus 167 f~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~ 241 (400)
T PRK11646 167 CATGAVLFVLAAAFNAWLLPAYKLSTV----RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQ-VMLMLPIMVNDIAGS 241 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccc----chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHH-HHHhhhhhHHhhcCC
Confidence 999887777665554445554322111 122334667788888776554433333222222 223778887764333
Q ss_pred --chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHH
Q 014905 281 --PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFS 358 (416)
Q Consensus 281 --~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (416)
..+...+...+....+....++..||. .+.++.+..+..+..+......... +.+.......
T Consensus 242 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~~~ 305 (400)
T PRK11646 242 PSAVKWMYAIEACLSLTLLYPIARWSEKR-FRLEHRLMAGLLIMSLSMFPIGMVS---------------NLQQLFTLIC 305 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHhh---------------hHHHHHHHHH
Confidence 366666666666655555556666552 4445555444444443333222222 3344444555
Q ss_pred HHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 359 TFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 359 l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+.+.+.+...|...++..+.+|+++||+++|+.+...+....++
T Consensus 306 l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig 349 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIG 349 (400)
T ss_pred HHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhc
Confidence 66777777788889999999999999999999988777765544
No 15
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.96 E-value=1.5e-26 Score=217.91 Aligned_cols=317 Identities=13% Similarity=0.077 Sum_probs=209.9
Q ss_pred HHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHH
Q 014905 56 QGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIF 133 (416)
Q Consensus 56 ~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l 133 (416)
..... |.. +|+|.|+.++|++.+++.++..+++++.|+++||+|||+++..+.+...++.+ ..+++|++.+++.|++
T Consensus 27 ~~~~~-~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 105 (412)
T TIGR02332 27 IGFAG-LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRIL 105 (412)
T ss_pred HHHHH-HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 33344 444 89999999999999999999999999999999999999999999999998888 7889999999999999
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh----hccCchhHHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT----LALGPVAPFDAAAC 206 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~----~~~~w~~~f~~~~~ 206 (416)
.|++.+...+.... ++.|. ++|++..+.. ..+..+|. .+++.+++.+.+. ...|||+.|.+.++
T Consensus 106 ~G~~~~~~~~~~~~-~~~~~~~~~~rg~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~ 176 (412)
T TIGR02332 106 VGIAEAGFLPGILL-YLTFWFPAYFRARANALF----MIAMPVTM----ALGLILSGYILALDGLMALKGWQWLFLLEGF 176 (412)
T ss_pred HHHHHhhHHHHHHH-HHHHHcCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHhCCCCCCccchhHHHHHHHH
Confidence 99999998887777 77876 5677774444 33334444 5555666655431 01399999999888
Q ss_pred HHHHHHHHHHHhcccCCCCcc---chhhHH--H-----------h-----------hhHHHhhhcchhHHHHHHHHHHHH
Q 014905 207 FLAFGMVIILASWTENYGDPE---KKNLLA--Q-----------F-----------KGAALAIASDERIALLGAIQSLFE 259 (416)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~-----------~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 259 (416)
..++..++.+++.||+|++.+ +++.+. + . +..+++++ ++.++.......+..
T Consensus 177 ~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 255 (412)
T TIGR02332 177 PSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLT 255 (412)
T ss_pred HHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHH
Confidence 877766666656777764321 110000 0 0 01122222 355555555555555
Q ss_pred HHHHHHHHhhhcccccCC-CCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHH-HHHHHHHHHHHHHHhhc
Q 014905 260 GSMYTFVFLWTPALSPND-EEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQI-VFIISSASLLIPILTNF 334 (416)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 334 (416)
...+.+.. |.|.++++. .+. ..+.......++.+++.++.+++.|| .+.|+.... ........+ .......
T Consensus 256 ~~~~~~~~-~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr--~~~r~~~~~~~~~~~~~~~-~~~~~~~ 331 (412)
T TIGR02332 256 NTLSAINI-WTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR--LKERKHHTALPYLFAAAGW-LLASATD 331 (412)
T ss_pred HHHHHHHH-HHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc--cCccHHHHHHHHHHHHHHH-HHHHhcC
Confidence 55555444 999999762 233 36777777899999999999999999 655554332 222222222 1111111
Q ss_pred cCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 335 LETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.........+..++.....+.......|.+|+++|++++|+.+...++...+
T Consensus 332 --------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~ 384 (412)
T TIGR02332 332 --------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL 384 (412)
T ss_pred --------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh
Confidence 11212222222222222233444555567899999999999998887776544
No 16
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=2.2e-27 Score=221.52 Aligned_cols=318 Identities=14% Similarity=0.034 Sum_probs=217.4
Q ss_pred hHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
...++. |.+ +++|.|++++|++.+++.++..+++++.|+++||+|||+++..+....+++.+ ..++++++.+++.|+
T Consensus 21 ~~~~~~-~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (377)
T TIGR00890 21 TWTLLA-PPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYG 99 (377)
T ss_pred hhhhHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566 545 89999999999999999999999999999999999999999999999888888 888999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
+.|++.+...+.... .+.|. ++|++..+.. ..+..+|. .+++.+.+...+.. +||+.|.+.++..++
T Consensus 100 ~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~g~----~~~~~~~~~~~~~~--~~~~~f~~~~~~~~~ 168 (377)
T TIGR00890 100 LASAGVGIAYGIALN-TAVKWFPDKRGLASGII----IGGYGLGS----FILSPLITSVINLE--GVPAAFIYMGIIFLL 168 (377)
T ss_pred HHhHHHHHHHHhHHH-HHHHHcCcccHHHHHHH----HHhcchhH----hHHHHHHHHHHhcc--cHHHHHHHHHHHHHH
Confidence 999999987776666 66654 5666664333 33333333 44444444445554 899999998888877
Q ss_pred HHHHHHHhcccCCCCccc-hhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC---chHHHH
Q 014905 211 GMVIILASWTENYGDPEK-KNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIF 286 (416)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~ 286 (416)
..+......+|+++++++ ++..++.+.+.++.+|+|+.+.......+.......... +.+.+.++ .+. ..+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 246 (377)
T TIGR00890 169 VIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIG-LYKPYGQS-LGLSDGFLVLAV 246 (377)
T ss_pred HHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHH-HHHHHHHH-cCCCHHHHHHHH
Confidence 766665455443322111 111112223456777887777665444443333333222 44445443 223 256777
Q ss_pred HHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014905 287 ATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI 366 (416)
Q Consensus 287 ~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 366 (416)
+...++.+++++..+++.|| .++|+.+........+.......... . +.........+.++..+.
T Consensus 247 ~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~g~~~g~ 311 (377)
T TIGR00890 247 SISSIFNGGGRPFLGALSDK--IGRQKTMSIVFGISAVGMAAMLFIPM---------L----NDVLFLATVALVFFTWGG 311 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HhhhhhhhHHHHHHHHHHHHHHHccc---------c----hhHHHHHHHHHHHHHhcc
Confidence 77888999999999999999 67666666555544444333322221 0 112233445566677777
Q ss_pred chhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 367 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 367 ~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
..+....+.+|.+|+++|++++|+.+...++...+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 346 (377)
T TIGR00890 312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIF 346 (377)
T ss_pred chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH
Confidence 77777888999999999999999988777665443
No 17
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.96 E-value=6.6e-28 Score=222.98 Aligned_cols=330 Identities=21% Similarity=0.283 Sum_probs=228.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc
Q 014905 44 IVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS 121 (416)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~ 121 (416)
+..++...+.....|.++..+ +++|.|+.++|++.+.+.++..+++++.|+++||+|||+++..+.+..+++.+ ..++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 344566777778888883244 79999999999999999999999999999999999999999999998888855 4455
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCch
Q 014905 122 SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPV 198 (416)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~ 198 (416)
++.+.+++.|++.|++.+...+...+ ++.|. ++|++..+. ...+..+|. .++|.+++.+.+.. +||
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~----~~~~~~~g~----~~g~~l~~~l~~~~--~~~ 151 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNA-LIADWFPPEERGRAFGI----LSAGFSLGS----ILGPLLGGFLISYF--GWR 151 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCTCCHHHHHHH----HHHHHHHHH----HHHHHHHHHCCCHC--HHC
T ss_pred hhHHHHhhhccccccccccccccccc-cccccchhhhhhhcccc----ccchhhhhh----hcccchhhhhhhcc--ccc
Confidence 77789999999999999999999888 88877 456666433 334444444 67777777777665 899
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHH---hh----hHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 014905 199 APFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQ---FK----GAALAIASDERIALLGAIQSLFEGSMYTFVFLWTP 271 (416)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
+.|++.+++.++..++.....+++++++++++.+++ .+ +.++.++++|.++............... ...+.|
T Consensus 152 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 230 (352)
T PF07690_consen 152 WAFLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSG-FSFFLP 230 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred cccccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHH-hhcccc
Confidence 999999999888877544344333322211111111 11 1255666666655232222322333333 333888
Q ss_pred ccccCCCCCc----hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcc
Q 014905 272 ALSPNDEEIP----HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGIS 347 (416)
Q Consensus 272 ~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (416)
.|.++..+.+ .+.......+...++.++.+++.|| .+.++.......................
T Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 297 (352)
T PF07690_consen 231 LYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR--FGRRRRLLIAILLLILGALGLLLLPFSS----------- 297 (352)
T ss_dssp HHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHCCSHHHC-----------
T ss_pred hhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHHHHHHHHHHHHHHHHHHHHHHHhh-----------
Confidence 8866543333 5566777788888889999999999 6666655554444443333332222100
Q ss_pred cchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 348 LSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 348 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
+.........+.+++.+...+...++.+|.+|+|+||++.|+.+...++..
T Consensus 298 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 348 (352)
T PF07690_consen 298 -SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGG 348 (352)
T ss_dssp -HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 334556677778888888999999999999999999999999887766544
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=3.2e-26 Score=215.89 Aligned_cols=326 Identities=14% Similarity=0.193 Sum_probs=224.6
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHH
Q 014905 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILML 129 (416)
Q Consensus 51 ~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~ 129 (416)
.+.....|.++++.+++|.|+++.++..+.+.++..+++++.|+++||+|||+.+..+.....++.+ ...+++++.+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 106 (406)
T PRK15402 27 IANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTL 106 (406)
T ss_pred hhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 3556667777343389999999999999999999999999999999999999999999888888877 778889999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAAC 206 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~ 206 (416)
.|++.|++.+...+...+ .+.|. ++|.+..+.. ......|. .++|.+++.+.+.. +||+.|++.++
T Consensus 107 ~~~l~G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~----~~~~~~~~----~~g~~i~~~l~~~~--~w~~~~~~~~~ 175 (406)
T PRK15402 107 LRFLQGIGLCFIGAVGYA-AIQESFEEADAIKITALM----ANVALLAP----LLGPLVGAALIHVL--PWRGMFVLFAA 175 (406)
T ss_pred HHHHHHhHhhhHHHHHHH-HHHHHhChhHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHcc--CccHHHHHHHH
Confidence 999999999887776677 77765 3333332222 22222333 77778888777766 99999999888
Q ss_pred HHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hH
Q 014905 207 FLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HG 283 (416)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g 283 (416)
..++..+......||+++++++++..++..++.+++++||+++.......+.......... +.|.+.++..+.+ .+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~~~~~~g 254 (406)
T PRK15402 176 LAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIA-LSPVILISGEQLSSYEYG 254 (406)
T ss_pred HHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhCCCHHHHH
Confidence 8777766655556665543322211233455677888998888776655555444444333 5677766544443 45
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHh
Q 014905 284 FIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEAC 363 (416)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (416)
.......++.+++.++.+++.|| .+.++.+..+.....+............ ++ +.+.......+.+++
T Consensus 255 ~~~~~~~~~~~~g~~~~g~l~~r--~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~---~~~~~~~~~~~~g~g 322 (406)
T PRK15402 255 LLQVPVFGALIAGNLTLARLTSR--RPLRSLIRMGLWPMVAGLLLAALATVIS-------SH---AYLWLTAGLSLYAFG 322 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHHHcc-------cc---cHHHHHHHHHHHHHH
Confidence 55566677888899999999999 7777766665554443333333222100 00 234455666777777
Q ss_pred hhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 364 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 364 ~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+...+........ .++++||++.+..+...+....+
T Consensus 323 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~ 359 (406)
T PRK15402 323 IGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTV 359 (406)
T ss_pred HHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHH
Confidence 77777666665543 45588999999887766655443
No 19
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.6e-26 Score=215.73 Aligned_cols=328 Identities=16% Similarity=0.129 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHH-HHHHHHhhhh-h
Q 014905 43 IIVYSLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVT-YCITYMLSCV-T 118 (416)
Q Consensus 43 ~~~~~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~-~~~~~~~~~l-~ 118 (416)
.+..++..++.....|.+ |.+ +++|.|++++|++.+.+.+...+.+++.|+++||+||||.++. +.....++.+ .
T Consensus 3 ~~~~~~~~~~~~~~~~~l-~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTL-SLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHH-HHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 345567778888999999 665 6899999999999999999999999999999999999987665 4555555555 6
Q ss_pred ccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCc
Q 014905 119 KHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGP 197 (416)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w 197 (416)
..+++++.+++.|++.|.+.+...+...+ +..|. +++++...........+..+|. .++|.+++.+.+.. +|
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~ig~~~~~~l~~~~--~~ 154 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFA-LAREHADRTGREAVMFSSVMRAQISLAW----VIGPPLAFWLALGF--GF 154 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhhhcchhhHHHHHHHHHHHhHHH----HHhhhHHHHHHHhc--cc
Confidence 77889999999999998877777776666 66665 3333332111233333334445 77888888887776 99
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 014905 198 VAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPND 277 (416)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (416)
|+.|++.++..++..+...+..||.++++++++ .+.+.++.+++|+.+.......+.......... +.|.+.++.
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL----TRLEVRGLLASRDTRLLFVACTLMWGCNILYII-NMPLLIIHE 229 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCccccc----CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHh-hhHHHHHHH
Confidence 999999988877777666655676554322211 112334456666655443333333332222222 667776554
Q ss_pred CCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHH
Q 014905 278 EEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQL 354 (416)
Q Consensus 278 ~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (416)
.+.+ .+..........+++..+.+++.|| .+.|+.+.............. .... +.+...
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~ 292 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR--FGKRRLMLLAALAGVAFYTGL-AADN--------------SLWALL 292 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH--hcchhHHHHHHHHHHHHHHHH-HHHH--------------HHHHHH
Confidence 4443 5555555566677788899999999 777776655444333222222 2221 344455
Q ss_pred HHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 355 IGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 355 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
....+.+++.+...+....+.+|..|++ +++++|+.+...++...+
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ 338 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWII 338 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHH
Confidence 5566677777877888888888988875 568899887776655443
No 20
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.8e-26 Score=217.16 Aligned_cols=313 Identities=16% Similarity=0.090 Sum_probs=207.4
Q ss_pred HHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc---
Q 014905 47 SLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH--- 120 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~--- 120 (416)
++..++..+..|.+ |.+ +++|.|+.++|++.+++.++..+++++.|+++||+||||++..+.+..+++.+ +..
T Consensus 25 ~~~~~~~~~~~~~l-~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 103 (399)
T PRK05122 25 FISYLTIGLPLAVL-PGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGL 103 (399)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhh
Confidence 37788888999998 654 68999999999999999999999999999999999999999999877666543 222
Q ss_pred c-----hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 014905 121 S-----SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT 192 (416)
Q Consensus 121 ~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~ 192 (416)
. .+++.+++.|+++|++.+...+...+ ++.|. ++|++..++. +.+...|. .+++.+++.+.+.
T Consensus 104 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~----~~g~~l~~~l~~~ 174 (399)
T PRK05122 104 LAAWPVLSLLLLLLGRLLLGIGESLAGTGSIL-WGIGRVGALHTGRVISWN----GIATYGAL----AIGAPLGVLLYHW 174 (399)
T ss_pred hhccchhHHHHHHHHHHHHHhhHHhhcchHHH-HHHhhcChhhhccchhhh----hhhhhHHH----HHHHHHHHHHHHc
Confidence 2 25678999999999999998887777 66544 7777774444 33333444 6667777777776
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPA 272 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (416)
. +|+..+.+..+..++..+... ..|++++++ ++ + .+.++.+|+ .+.......+.......... +.|.
T Consensus 175 ~--g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~--~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~ 241 (399)
T PRK05122 175 G--GLAGLGLLIMLLALLGLLLAR-PRPAVPPVK-GE--R----LPFRRVLGR--VWPYGMGLALASIGFGTIAT-FITL 241 (399)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHh-cCCCCCCCC-cc--c----hhHHHHHHH--HHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 6 999988876665544433322 223222111 11 1 112222222 11111111112222222222 5566
Q ss_pred cccCCCCCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhH
Q 014905 273 LSPNDEEIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSL 352 (416)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (416)
|.++....+.+.......++.+++.+..+++.|| .+.+|.+.....+............ +.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 304 (399)
T PRK05122 242 YYAARGWDGAALALTLFGVAFVGARLLFGNLINR--LGGLRVAIVSLLVEILGLLLLWLAP---------------SPWM 304 (399)
T ss_pred HHHHcccccchHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhc---------------cHHH
Confidence 6554321235666677788888999999999999 7777766555554444433332222 3455
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 353 QLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 353 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
..+...+.+++.+..++.......|..|+++||+++|+.+...++..
T Consensus 305 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 305 ALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 55666778888888888888888899999999999999877666553
No 21
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=7.5e-27 Score=223.76 Aligned_cols=317 Identities=13% Similarity=0.006 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh------hccchhHHHHHH
Q 014905 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV------TKHSSEYKILML 129 (416)
Q Consensus 56 ~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l------~~~~~~~~~l~~ 129 (416)
..+..+++.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.+..++... +..+++++.+++
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 127 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIA 127 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 34455333489999999999999999999999999999999999999998877665555433 334689999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-hccCchhHHHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT-LALGPVAPFDAAA 205 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~-~~~~w~~~f~~~~ 205 (416)
.|+++|++.+...+...+ +++|+ ++|+++.++.+...++| . .+++.+.....+. ...+||..|.+.+
T Consensus 128 ~r~l~G~~~~~~~~~~~~-~i~~~~~~~~rg~a~gi~~~~~~lG----~----~l~~~i~~~~~~~~~~~~~~~~f~~~g 198 (467)
T PRK09556 128 LWALSGFFQSTGGPCSYS-TITRWTPRRKRGRFLGFWNISHNLG----G----AGAGGVALWGANYFFDGHVIGMFIFPS 198 (467)
T ss_pred HHHHHHHHHhccchHHHH-HHHHHcCccceeeeEEeeecccchh----h----hHHHHHHHHHHHhhccCcchhHHHHHH
Confidence 999999999988888888 88877 67888866654444343 3 3333444433332 1126898888877
Q ss_pred HHHHHHHHHHHHhcccCCCCc---cc---------hhhHH--Hh----hhH-HHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 014905 206 CFLAFGMVIILASWTENYGDP---EK---------KNLLA--QF----KGA-ALAIASDERIALLGAIQSLFEGSMYTFV 266 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~--~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (416)
++.++..+..+...++++++. ++ ++.++ +. .+. .++.+|+|.++...+...+.....+...
T Consensus 199 ~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 278 (467)
T PRK09556 199 IIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGID 278 (467)
T ss_pred HHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 777666555554444433211 00 00000 00 011 2236788888888777776666666644
Q ss_pred HhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014905 267 FLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRG 343 (416)
Q Consensus 267 ~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (416)
. |.|.|+++..+.+ .+.......++.+++.++.|+++|| .+.|+..................... +
T Consensus 279 ~-~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr--~g~r~~~~~~~~~~~~~~~~~~~~~~---~----- 347 (467)
T PRK09556 279 N-WSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL--ANGRRALVACIALALIIFTLGVYQHA---T----- 347 (467)
T ss_pred H-HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCchHHHHHHHHHHHHHHHHHHhc---C-----
Confidence 4 9999998766654 5666677788899999999999999 66666554433332222211111111 0
Q ss_pred CCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 344 GGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
+.+...+..++.|+..............|.+|++.||++.|+.+...++
T Consensus 348 -----~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l 396 (467)
T PRK09556 348 -----SEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYL 396 (467)
T ss_pred -----cHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Confidence 2333334444555433222223345667999999999999999877775
No 22
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=8.8e-26 Score=213.20 Aligned_cols=323 Identities=18% Similarity=0.170 Sum_probs=217.6
Q ss_pred HHHHHHHHhHHHHHHHHH-HHcCCChhh-----HHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc
Q 014905 47 SLMMAGDWLQGPYVYYLY-STYGFGKGE-----IGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK 119 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~-~~~~~s~~~-----~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~ 119 (416)
++...++....|++ |.+ +++|.+..+ .|++.+++.++..+++++.|+++||+|||+.+..+.....++.+ ..
T Consensus 24 ~~~~~~~~~~~~~l-~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 102 (408)
T PRK09874 24 FLTGAAFSLVMPFL-PLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMG 102 (408)
T ss_pred HHHHHHHHHhhhhH-HHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHH
Confidence 36677778888988 666 889988654 48999999999999999999999999999999999888888777 67
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC
Q 014905 120 HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG 196 (416)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~ 196 (416)
..++++.+++.|++.|++.+. .+.... ++.|. ++|++..+.. ..+..+|. .++|.+++.+.+.. +
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~--~ 170 (408)
T PRK09874 103 LAQNIWQFLILRALLGLLGGF-VPNANA-LIATQVPRNKSGWALGTL----STGGVSGA----LLGPLAGGLLADSY--G 170 (408)
T ss_pred HHhhHHHHHHHHHHHHHhhhh-HHhHHH-HHHHhcCHhhhhHHHHHH----HHHHHHHH----HHHHHHHHHHHHHh--C
Confidence 788999999999999997654 455555 55544 5566663333 33334444 67777777777766 9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHH-HHHHHHHHHHHHHhhhccccc
Q 014905 197 PVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAI-QSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 197 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 275 (416)
||..|++.++..++..+......||+++++++++ +.+. ++..+..++++.+..... ....+........ +.|.|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 247 (408)
T PRK09874 171 LRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-MLHM-REVVTSLKNPKLVLSLFVTTLIIQVATGSIAP-ILTLYVR 247 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-hhHH-HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 9999999888877776666655665543222221 1111 223345566665443222 2222222222122 4555554
Q ss_pred CCCC-Cc-----hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccc
Q 014905 276 NDEE-IP-----HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLS 349 (416)
Q Consensus 276 ~~~~-~~-----~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (416)
+..+ .+ .+.+.....++.+++.+..+++.|| .++++.+........+..... .... +
T Consensus 248 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~-~~~~--------------~ 310 (408)
T PRK09874 248 ELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR--IGPEKILITALIFSVLLLIPM-SFVQ--------------T 310 (408)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccchhHHHHHHHHHHHHHHH-HHhc--------------c
Confidence 4211 11 3455555677888889999999999 777776666555444333222 2221 3
Q ss_pred hhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 350 GSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 350 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
.+...+...+.+++.+...|...+...+..|+++||+.+++.+...++...++
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~g 363 (408)
T PRK09874 311 PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTG 363 (408)
T ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhh
Confidence 45555666778888888889889999999999999999998877666554443
No 23
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=8.2e-26 Score=211.09 Aligned_cols=317 Identities=12% Similarity=0.067 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHH----HHHHHHHHhhh
Q 014905 42 YIIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRAC----VTYCITYMLSC 116 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l----~~~~~~~~~~~ 116 (416)
....++....+..+..|++ |.| +++|.|.+++|++.+.+.+...++++++|+++||+|||+.. ..+.....+.
T Consensus 9 l~~~~~~~~~~~~~~~p~l-~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~- 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFF-PAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA- 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-
Confidence 3344456667778899999 767 89999999999999999999999999999999999985433 2222222221
Q ss_pred hhccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcc
Q 014905 117 VTKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLAL 195 (416)
Q Consensus 117 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~ 195 (416)
....+++++.+++.|.++|.+.+...+...+ +..+. ++|++..+.. ..+..+|. +++|.+++.+.+.+
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~a-l~~~~~~~~~~~~g~~----~~~~slG~----~~g~~l~g~l~~~~-- 155 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDA-LANTWQKQFGLDYGKV----RLIGSAAF----IIGSALFGGLIGMF-- 155 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHH-HHHHHHHHcCCCccHH----HHHHHHHH----HHHHHHHHHHHHHc--
Confidence 1346788999999999999988888887777 76655 6667763333 23333444 88888888888886
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
|||..|.+......+.. ......|+.++++++++.+++..++.++++|+|+++.......+.+.....+.. +.|.|.+
T Consensus 156 g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~l~ 233 (382)
T TIGR00902 156 DEQNILAILTAGLAFML-IGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYG-FSAIYWQ 233 (382)
T ss_pred ChhHHHHHHHHHHHHHH-HHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 99999988765533322 222233332222111111112234567888999988887777766666666444 7788887
Q ss_pred CCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhH
Q 014905 276 NDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSL 352 (416)
Q Consensus 276 ~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (416)
+ .+.+ .|.......++.+++....+++.|| .+.++.+.++.....+......... +.+.
T Consensus 234 ~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r--~g~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~ 295 (382)
T TIGR00902 234 A-AGISASATGLLWGIGVLAEIIIFAFSNKLFQN--CSARDLLLISAIACVGRWAIIGAIE---------------AFPL 295 (382)
T ss_pred H-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh--CCHHHHHHHHHHHHHHHHHHHHhHh---------------hHHH
Confidence 6 4443 7788888889999999999999999 8888887777766665555443333 5577
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee
Q 014905 353 QLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 353 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
.+....+.++..+...+....++++. |+++|++.+++++
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 77789999999999999999999988 9999999999875
No 24
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=2.5e-25 Score=210.64 Aligned_cols=319 Identities=14% Similarity=0.146 Sum_probs=212.4
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-h---ccch
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-T---KHSS 122 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~---~~~~ 122 (416)
+..+......+.+ |.+ +++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.....++.+ + ..++
T Consensus 37 ~~~~~~~~~~~~~-p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~ 115 (438)
T PRK10133 37 LWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM 115 (438)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4455566677777 656 89999999999999999999999999999999999999999999999888876 4 4578
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHH------------
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGN------------ 187 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~------------ 187 (416)
+++.++++|+++|++.+...+..+. ++.|. ++|+...+..+..+++|..+|. .+++.+..
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~-~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~----~~g~~l~~~~~~~~~~~~~~ 190 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANP-FVTVLGPESSGHFRLNLAQTFNSFGAIIAV----VFGQSLILSNVPHQSQDVLD 190 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHhcCCcccchhhhh
Confidence 9999999999999999999998888 77655 3333334444455555555544 44332210
Q ss_pred -----HHHhh---hccCchhHHHHHH-HHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHH
Q 014905 188 -----LLVDT---LALGPVAPFDAAA-CFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLF 258 (416)
Q Consensus 188 -----~~~~~---~~~~w~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (416)
....+ +..+||.+|+... +..++..+......||.+.++++++.+++..++.++++|+|+++...+..++.
T Consensus 191 ~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~ 270 (438)
T PRK10133 191 KMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCY 270 (438)
T ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHH
Confidence 00000 0016788886544 33333333333234443221111111111233456778888776655544444
Q ss_pred HHHHHHHHHhhhcccc-cCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhc
Q 014905 259 EGSMYTFVFLWTPALS-PNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNF 334 (416)
Q Consensus 259 ~~~~~~~~~~~~~~~~-~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (416)
....+.... |.+.|. ++..+.+ .+..+....++.+++++..+++.|| ++.+|.+.....+....+.......
T Consensus 271 ~~~~~~~~~-~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r--~g~~~~l~~~~~~~~~~~~~~~~~~- 346 (438)
T PRK10133 271 VGAQTACWS-YLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR--FAPHKVLAAYALIAMALCLISAFAG- 346 (438)
T ss_pred HHHHHHHHH-HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 444443333 777774 4444553 6888888899999999999999999 7777776666555443333332222
Q ss_pred cCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee
Q 014905 335 LETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
+ ......+.+.+++.+..+|..++...|..|++ .+++.++..
T Consensus 347 --------------~-~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~ 388 (438)
T PRK10133 347 --------------G-HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV 388 (438)
T ss_pred --------------C-hHHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh
Confidence 1 22455677889999999999999999988774 566666654
No 25
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=3.8e-26 Score=214.40 Aligned_cols=315 Identities=16% Similarity=0.161 Sum_probs=206.0
Q ss_pred HHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----hc-
Q 014905 47 SLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----TK- 119 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~~- 119 (416)
++...+..+..|.+ |.+ +++|.|++++|++.+++.++..+++++.|+++||+||||.++.+.+...++.+ ..
T Consensus 25 ~~~~~~~~~~~p~l-~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 103 (392)
T PRK12382 25 FLTYMTVGLPLPVI-PLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAI 103 (392)
T ss_pred HHHHHHHHHHhhhh-hHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhc
Confidence 36666777888888 654 68999999999999999999999999999999999999999988766554332 11
Q ss_pred ----cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 014905 120 ----HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT 192 (416)
Q Consensus 120 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~ 192 (416)
..++++.+++.|+++|++.+...+...+ ++.|. ++|+++.++. +.+...|. .++|.+++.+.+.
T Consensus 104 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~a~~~~----~~~~~~g~----~~g~~~~~~l~~~ 174 (392)
T PRK12382 104 LPVSAPFKFALLVVGRLILGFGESQLLTGALT-WGLGLVGPKHSGKVMSWN----GMAMYGAL----AAGAPLGLLLHSH 174 (392)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCCccccchhhhHH----HHHHHHHH----HHHHHHHHHHHhc
Confidence 1357899999999999999988877777 66544 7788875444 33333444 6677777777776
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPA 272 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (416)
. ||+..+.+..+..++..... ...||.++++++ +++.++..+..++ +... ..+....... ...+.|.
T Consensus 175 ~--g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~-----~~l~~~~~~~-~~~~~~~ 241 (392)
T PRK12382 175 F--GFAALALTTMVLPLLAWAFN-GTVRKVPAHAGE---RPSLWSVVGLIWK-PGLG-----LALQGVGFAV-IGTFVSL 241 (392)
T ss_pred c--ChHHHHHHHHHHHHHHHHHH-HhccCCCCCccc---CchHHHHHHHHHH-hHHH-----HHHHHHHHhH-HHHHHHH
Confidence 5 99987766555443333222 122332211111 1111111221111 1111 1111222222 2225566
Q ss_pred cccCCCCCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhH
Q 014905 273 LSPNDEEIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSL 352 (416)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (416)
|.++....+.+.......++.+++.+..+++.|| .+.+|.+..+..+..+....... .. +.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~ 304 (392)
T PRK12382 242 YFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDR--FGGVKVAIVSLLVETVGLLLLWL-AP--------------TAWV 304 (392)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeehHHHHHHHHHHHHHHHH-cc--------------cHHH
Confidence 6654322235666666778888899999999999 77777766655555544433222 21 3455
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 353 QLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 353 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
......+.+++.+...+...+...|..|+++||+++|+.+...++...+
T Consensus 305 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 353 (392)
T PRK12382 305 ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV 353 (392)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677788888888888888899999999999999988776665433
No 26
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=9.5e-27 Score=220.19 Aligned_cols=326 Identities=17% Similarity=0.093 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc--
Q 014905 44 IVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK-- 119 (416)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~-- 119 (416)
...++...+..+..+.+ |.+ ++++.|+.+.|++.+...++..+++++.|+++||+|||+++..+....+++.+ ..
T Consensus 24 ~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 24 IARFISIFGLGLLGVAV-PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH
Confidence 33446777778888887 777 88889999999999999999999999999999999999998887665555443 21
Q ss_pred ---cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 120 ---HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 120 ---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
..++++.+++.|++.|++.+...++..+ ++.|. ++|++..+.. ..+..+|. .++|.+++.+.+..
T Consensus 103 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~g~----~~g~~l~g~l~~~~ 173 (417)
T PRK10489 103 AFLPEPSLLAIYLLGLWDGFFGSLGVTALLA-ATPALVGRENLMQAGAIT----MLTVRLGS----VISPALGGLLIAAG 173 (417)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhh-hhhhccCHHHHHHHHHHH----HHHHhHHH----HhHHHHHHHHHHHH
Confidence 2567889999999999998887777777 77655 4455553333 33333444 77778887777765
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc-chhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 014905 194 ALGPVAPFDAAACFLAFGMVIILASWTENYGDPE-KKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPA 272 (416)
Q Consensus 194 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (416)
+|++.|.+.++..++..++.. ..||++++++ +++..++.+++++..+++|.++...+...+.. ....... +.|.
T Consensus 174 --~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~p~ 248 (417)
T PRK10489 174 --GVAWNYGLAAAGTFITLLPLL-RLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRV-LYPA 248 (417)
T ss_pred --hhHHHHHHHHHHHHHHHHHHH-hCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHH-hhHH
Confidence 899999888777666655544 4454433221 11112333455667778877655533333222 2223233 7788
Q ss_pred cccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccc
Q 014905 273 LSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLS 349 (416)
Q Consensus 273 ~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (416)
|.++..+.+ .|.+.+...++.+++.++.+++.|| .+.++.+..+.....+....... .. +
T Consensus 249 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~--~~~~~~l~~~~~~~~~~~~~~~~-~~--------------~ 311 (417)
T PRK10489 249 LADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS--ARPGLLMLLSTLGSFLAVGLFGL-MP--------------M 311 (417)
T ss_pred HHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc--cCcchHHHHHHHHHHHHHHHHHc-cc--------------h
Confidence 887744443 6778888899999999999999998 55555555554444433332221 11 3
Q ss_pred hhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 350 GSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 350 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+...+...+.+++.+...+...++++|..|++.||+++|+.+...++...+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 312 WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI 363 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH
Confidence 4455566677777777777788889999999999999999987766655444
No 27
>PRK09952 shikimate transporter; Provisional
Probab=99.95 E-value=2.4e-25 Score=211.34 Aligned_cols=301 Identities=14% Similarity=0.050 Sum_probs=188.4
Q ss_pred HHc--CCChhhHHHHH-----HHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH--------HHH
Q 014905 65 STY--GFGKGEIGQLF-----IAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK--------ILM 128 (416)
Q Consensus 65 ~~~--~~s~~~~g~i~-----~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~--------~l~ 128 (416)
+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++..+....+++.+ ++++++++ .++
T Consensus 51 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 129 (438)
T PRK09952 51 REFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLV 129 (438)
T ss_pred HhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 444 66665 45543 456677889999999999999999999999999999888 88888876 588
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH--------hhhccCc
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLV--------DTLALGP 197 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~--------~~~~~~w 197 (416)
+.|+++|++.+...+.... ++.|. ++|++..+.. ..+..+|. .+++.+...+. +. ++|
T Consensus 130 ~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~~~~~~----~~g~~~G~----~l~~~~~~~l~~~~~~~~~~~--~gW 198 (438)
T PRK09952 130 TLRAIQGFAVGGEWGGAAL-LAVESAPKNKKAFYSSGV----QVGYGVGL----LLSTGLVSLISMMTTDEQFLS--WGW 198 (438)
T ss_pred HHHHHHHhhhcccHHHHHH-HHHHhCCCCCCcHHHHHH----HHHHHHHH----HHHHHHHHHHHHhCCHHHhhc--cCh
Confidence 8999999999999998888 88887 5666653333 33334444 33332222222 23 499
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhH---HHhhhHHHhhhcchhHHHHHHH-HHHHHHHHHHHHHhhhccc
Q 014905 198 VAPFDAAACFLAFGMVIILASWTENYGDPEKKNLL---AQFKGAALAIASDERIALLGAI-QSLFEGSMYTFVFLWTPAL 273 (416)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 273 (416)
|.+|++.++..++... .....||+++..++++.+ ++.....+.++|+|+.+..... ..+.....+.... |.|.|
T Consensus 199 r~~f~~~~~~~l~~~~-l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y 276 (438)
T PRK09952 199 RIPFLFSIVLVLIALW-VRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTA-FALNY 276 (438)
T ss_pred HHHHHHHHHHHHHHHH-HHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 9999988776554333 222455654321111000 0011122335667666655433 3333445555444 88888
Q ss_pred ccCCCCCchH---HHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccch
Q 014905 274 SPNDEEIPHG---FIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSG 350 (416)
Q Consensus 274 ~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (416)
.++..+.+.. ......++...++.++.+++.|| .++||....+.....+............ + +.
T Consensus 277 ~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr--~grr~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~ 343 (438)
T PRK09952 277 STQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR--FGRRRVYITGALIGTLSAFPFFMALEAQ-S----------IF 343 (438)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHHHcC-C----------hH
Confidence 8766665533 23334456667788899999999 7777766555443332222111111100 0 22
Q ss_pred hHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee
Q 014905 351 SLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
+.......+.+++.+...+..+++..|.+|++.|+++.|+..
T Consensus 344 ~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 344 WIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHH
Confidence 333334455567777778888999999999999998888753
No 28
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=3.2e-26 Score=217.32 Aligned_cols=321 Identities=13% Similarity=-0.007 Sum_probs=209.0
Q ss_pred hHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
...+.+ |.+ +++|.|+++.|++.+.+.++..+++++.|+++||+|||+++.++.+...++.+ ...+++++.+++.|+
T Consensus 41 ~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 119 (434)
T PRK11663 41 SFNAAM-PEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWV 119 (434)
T ss_pred hHHHhh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 345566 545 89999999999999999999999999999999999999999999999888888 778899999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
+.|++.+...+...+ ++.|. ++|++..++. ..+..+|. .+++.+.+.+.+.. +||+.|.+.+++.+
T Consensus 120 l~g~~~g~~~~~~~~-~~~~~~~~~~rg~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~--gw~~~f~~~~i~~~ 188 (434)
T PRK11663 120 LNAFFQGWGWPVCAK-LLTAWYSRTERGGWWAIW----NTAHNVGG----ALIPLVVGAIALHY--GWRYGMMIAGIIAI 188 (434)
T ss_pred HHHHHHHccchHHHH-HHHHhCCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHcc--cHHHHHHHHHHHHH
Confidence 999999988887777 77766 5677764444 33333444 66667777777765 99999998887766
Q ss_pred HHHHHHHHhcccCCCCc---------cc-hhh-HH--HhhhHHH-----hhhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 014905 210 FGMVIILASWTENYGDP---------EK-KNL-LA--QFKGAAL-----AIASDERIALLGAIQSLFEGSMYTFVFLWTP 271 (416)
Q Consensus 210 ~~~~~~~~~~~~~~~~~---------~~-~~~-~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
+..+......+|++++. ++ ++. ++ +.+.+.+ ..+++++++.......+.....+.... |.|
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p 267 (434)
T PRK11663 189 VVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAIND-WGN 267 (434)
T ss_pred HHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 55444443445443211 00 000 00 0011122 245677777765555544444444333 889
Q ss_pred ccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHH-HHHHHHHHHhhccCCCCCCCCCCcc
Q 014905 272 ALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIIS-SASLLIPILTNFLETPPDVRGGGIS 347 (416)
Q Consensus 272 ~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (416)
.|+++..+.+ .+...+...++..+++++.+++.||+..+.|+......... .............
T Consensus 268 ~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------------ 335 (434)
T PRK11663 268 LYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFA------------ 335 (434)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccc------------
Confidence 9986655553 56777778899999999999999994113333322211111 1111111111110
Q ss_pred cchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 348 LSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 348 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+...........+++.............|..|++.|+++.|+.+...++...+
T Consensus 336 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 388 (434)
T PRK11663 336 -SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL 388 (434)
T ss_pred -cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH
Confidence 22222222333333222222334556789999999999999998887776544
No 29
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=215.40 Aligned_cols=291 Identities=16% Similarity=0.157 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHH--------HHHHHHHHHhhhhhhhhhhhhh
Q 014905 78 FIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKI--------LMLGRIFGGIATSLLFSAFESW 148 (416)
Q Consensus 78 ~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~ 148 (416)
.++.+++..+++++.|+++||+|||+++.++.++++++.+ +++++|++. +++.|+++|++.|...+...+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~- 141 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI- 141 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH-
Confidence 5778899999999999999999999999999999999988 889998864 899999999999999999998
Q ss_pred hhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHH----HhhhccCchhHHHHHHHHHHHHHHHHHHhccc
Q 014905 149 LVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLL----VDTLALGPVAPFDAAACFLAFGMVIILASWTE 221 (416)
Q Consensus 149 ~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~----~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 221 (416)
+++|. ++|++..++.+.....|..+|. .+.+.+...+ ... +|||++|++.+++.++..++ ....||
T Consensus 142 ~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~----~~~~~~~~~~~~~~~~~--~gWR~~f~i~~~~~l~~~~~-~~~~~e 214 (490)
T PRK10642 142 FVAEYSPDRKRGFMGSWLDFGSIAGFVLGA----GVVVLISTIVGEANFLD--WGWRIPFFIALPLGIIGLYL-RHALEE 214 (490)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHH----HHHHHHHHhcCHHHhcC--ccHHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 99987 6777765554333333433333 4333333222 223 49999999977665554443 335677
Q ss_pred CCCCccchhh-----H----HHhhhHHHhhhcc-hhHHHHHHHH-HHHHHHHHHHHHhhhcccccCCCCCc---hHHHHH
Q 014905 222 NYGDPEKKNL-----L----AQFKGAALAIASD-ERIALLGAIQ-SLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFA 287 (416)
Q Consensus 222 ~~~~~~~~~~-----~----~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~ 287 (416)
+++..++++. + ++.+.++++++++ ++.+...... .+.....+.... |.|.|.++..+.+ .+....
T Consensus 215 sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~~~~~~ 293 (490)
T PRK10642 215 TPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLT-YMPSYLSHNLHYSEDHGVLIII 293 (490)
T ss_pred ChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHH
Confidence 6542111000 0 0112245555543 3333332222 223444555444 8999887654543 344555
Q ss_pred HHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcc
Q 014905 288 TFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIF 367 (416)
Q Consensus 288 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (416)
...++.+++.+..+++.|| .++|+.+..+.....+........... . +.........+.++..+..
T Consensus 294 ~~~~~~~~~~~~~g~l~dr--~grr~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~g~~~~~~ 359 (490)
T PRK10642 294 AIMIGMLFVQPVMGLLSDR--FGRRPFVILGSVALFVLAIPAFILINS--------N----VIGLIFAGLLMLAVILNCF 359 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHHHhC--------C----CHHHHHHHHHHHHHHHHHH
Confidence 5678888899999999999 777776655544332222111111110 0 2233444555566666666
Q ss_pred hhHHHHHHhccCCccccceeeeee
Q 014905 368 WPSIMKMRSQYIPEEARSTIMNFF 391 (416)
Q Consensus 368 ~~~~~~~~~~~~p~~~rg~~~g~~ 391 (416)
.+....+..|.+|++.|+++.|+.
T Consensus 360 ~g~~~~~~~~~~p~~~Rg~~~g~~ 383 (490)
T PRK10642 360 TGVMASTLPAMFPTHIRYSALAAA 383 (490)
T ss_pred HHHHHHHHHHHCCCccchHHHHHH
Confidence 677778888999999999998863
No 30
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=2e-26 Score=222.55 Aligned_cols=329 Identities=12% Similarity=0.105 Sum_probs=237.0
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+......+..+.+ |.+ +++|.|+++.+++.+.+.++..++.++.|+++||+|||+.++.+.....++.+ +..+++++
T Consensus 13 ~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 91 (485)
T TIGR00711 13 MAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLE 91 (485)
T ss_pred HHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHH
Confidence 4455556677777 555 89999999999999999999999999999999999999999999999999888 88899999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|+++|++.+...+...+ ++.|. ++|++..+ .+..+..+|. .++|.+++.+.++. +||+.|+
T Consensus 92 ~l~~~~~~~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~----~~~~~~~~g~----~~g~~~~~~l~~~~--~w~~~f~ 160 (485)
T TIGR00711 92 LMIIFRVIQGFGGGPLIPLSFS-TLLNIYPPEKRGRAMA----IWGLTVLVAP----ALGPTLGGWIIENY--HWRWIFL 160 (485)
T ss_pred HHHHHHHHHHhhhhhHHHHHHH-HHHHHCCHHHHHHHHH----HHHHHHHHHh----hhhhccHhHhccCc--Cceehhh
Confidence 9999999999999998888888 88866 56666633 3444444445 77778888887776 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccch-hhH-----------------H--------H----------------------
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKK-NLL-----------------A--------Q---------------------- 234 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------~--------~---------------------- 234 (416)
+.+...++..++.....||++++++++ +.. + +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 988877776666655555543221110 000 0 0
Q ss_pred -hhhH--HHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhccc
Q 014905 235 -FKGA--ALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSS 308 (416)
Q Consensus 235 -~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~ 308 (416)
.+++ ..+.+|+|+++...+..++.....+.... +.|.|.++..+.+ .+.......++.+++.++.+++.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-- 317 (485)
T TIGR00711 241 TDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFY-LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-- 317 (485)
T ss_pred cCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 0000 11345666666665555555555555444 8888888765553 6777788889999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceee
Q 014905 309 LRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIM 388 (416)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~ 388 (416)
.++|+.+..+.....+.......... . +. +.+.......+.+++.+...+.......+..|+++|+++.
T Consensus 318 ~~~~~~~~~g~~~~~~~~~~~~~~~~-~------~~----~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~ 386 (485)
T TIGR00711 318 IDPRKLVTIGLILYAVGFYWRAFTFT-P------DT----PFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGS 386 (485)
T ss_pred cCcHHHHHHHHHHHHHHHHHHhccCC-C------CC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHH
Confidence 77777666655544433333221111 0 00 3344555677788888887777777788889999999999
Q ss_pred eeeecccceeeeee
Q 014905 389 NFFRIPLNVFVCIV 402 (416)
Q Consensus 389 g~~~~~~~~~~~~~ 402 (416)
|+.+...++...++
T Consensus 387 ~~~~~~~~~g~~ig 400 (485)
T TIGR00711 387 SLSNFTRQLGGSIG 400 (485)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988877765554
No 31
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=3.1e-26 Score=214.34 Aligned_cols=329 Identities=16% Similarity=0.094 Sum_probs=219.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc
Q 014905 41 SYIIVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK 119 (416)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~ 119 (416)
.++...++..+++.......++..+++|.++.+.+++.+.+.++..+++++.|+++||+||||+++.+.....++.+ +.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 34444557777777766666444489999999999999999999999999999999999999999999888887776 55
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC
Q 014905 120 HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG 196 (416)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~ 196 (416)
+.++. ++.|+++|++.+...|...+ ++.|. ++|+++.++.+.. ...|. ++||.+++.+.+. .
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a-~i~~~~~~~~~~~a~~~~~~~----~~~~~----~~Gp~lgG~l~~~---~ 151 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYG-ILTELLPGEKLVKANGWMEGS----TIAAI----LLGTVLGGALADP---H 151 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHHHHHHH----HHHHH----HHHHHHHHHHHHH---H
Confidence 55553 67899999999999999998 88876 6677775555333 33334 6677777777765 5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCCCCccch--h---hHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 014905 197 PVAPFDAAACFLAFGMVIILASWTENYGDPEKK--N---LLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTP 271 (416)
Q Consensus 197 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
|+.++.+.+...++..+.. ...||++++++++ + ..++.++..++++++|..........+.......... ..|
T Consensus 152 ~~~~~~i~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 229 (393)
T PRK11195 152 AEAALAVCALIYLLAALFN-LFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRF-LVL 229 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHH-HHH
Confidence 7777776665554443333 3556544322111 1 1122334456777777655443333333322222222 334
Q ss_pred ccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCccc
Q 014905 272 ALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISL 348 (416)
Q Consensus 272 ~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (416)
.+.++..+. ..|.......++.+++++..+++.|| .+.++....+. ..+........ ..
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~--~~~~~~~~~g~-~~~~~~~~~~~-~~-------------- 291 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL--ETVLRVLPAGI-LMGLVVLLMAL-QH-------------- 291 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC--CcccchHHHHH-HHHHHHHHHHH-Hh--------------
Confidence 444443333 47888888899999999999999998 56665555443 22222222211 21
Q ss_pred chhHHHHHHHHHHHhhhcchhHHHHHHhccCCccc-cceeeeeeecccceeeeeeee
Q 014905 349 SGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEA-RSTIMNFFRIPLNVFVCIVLY 404 (416)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~-rg~~~g~~~~~~~~~~~~~~~ 404 (416)
+.+.......+.|++.+...+...+..++..|+|. +|++.|+.+...+++..++..
T Consensus 292 ~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 292 SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHH
Confidence 34445556667788888878888888888777665 799999998888876555443
No 32
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.95 E-value=7.3e-26 Score=212.06 Aligned_cols=310 Identities=11% Similarity=0.111 Sum_probs=211.8
Q ss_pred HhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 54 ~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
....|.++++.+++|+|.++.|++.+.+.++..+++++.|+++||+|||+++..+....+++.+ +.+++|++.++++|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 4556777333389999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
++|++.+...+.... ++.++ ++|++.. +.+..+...|. .+++.+++.+.++. .+||..+...++..++
T Consensus 106 l~Gig~~~~~~~~~~-~~~~~~~~~~~~~~----g~~~~~~~~g~----~~g~~~~~~l~~~~-~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 106 LGGVGIGIIQAVMPS-VIKRRFQQRTPLVM----GLWSAALMGGG----GLGAAITPWLVQHS-ETWYQTLAWWALPAVV 175 (393)
T ss_pred HHHhHHHHHhhhhhH-HHHHHccccchhHH----HHHHHHHHHHH----HHHHHHHHHHHHhc-CCHHHHHHHHHHHHHH
Confidence 999999998887777 77766 5566553 44444555555 44445555544442 2799887765555444
Q ss_pred HHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHH
Q 014905 211 GMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFA 287 (416)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~ 287 (416)
.........++++++++++ + ...++.+++++.+.+.+...+.....+.... |.|.+.++ .+.+ .|...+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~--~----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~lp~~l~~-~g~s~~~ag~~~~ 247 (393)
T PRK09705 176 ALFAWWWQSAREVASSHKT--T----TTPVRVVFTPRAWTLGVYFGLINGGYASLIA-WLPAFYIE-IGASAQYSGSLLA 247 (393)
T ss_pred HHHHHHHHhcCCCccccCC--C----cCCcccccCHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-cCCChhhhhHHHH
Confidence 3333322222222211111 1 1123455677777665555555555555444 88888876 3443 678888
Q ss_pred HHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcc
Q 014905 288 TFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIF 367 (416)
Q Consensus 288 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (416)
...++.+++++..+++.|| .+.++....+..+..+.......... +.. .....+.+++.+..
T Consensus 248 ~~~i~~i~g~~~~g~l~~r--~~~~~~~~~~~~l~~~~~~~~~~~~~--------------~~~--~~~~~l~g~g~g~~ 309 (393)
T PRK09705 248 LMTLGQAAGALLMPAMARH--QDRRKLLMLALVLQLVGFCGFIWLPL--------------QLP--VLWAMVCGLGLGGA 309 (393)
T ss_pred HHHHHHHHHHHHHHHHHhh--ccchHHHHHHHHHHHHHHHHHHHccc--------------hHH--HHHHHHHHHhccch
Confidence 8899999999999999999 67666666655444433332222221 111 12234556777777
Q ss_pred hhHHHHHHhccC-Cccccceeeeeeecccceee
Q 014905 368 WPSIMKMRSQYI-PEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 368 ~~~~~~~~~~~~-p~~~rg~~~g~~~~~~~~~~ 399 (416)
.|.......+.. |+++|++.+|+.+...++..
T Consensus 310 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 342 (393)
T PRK09705 310 FPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIA 342 (393)
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 777766666666 46789999998877666653
No 33
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=3.4e-25 Score=210.42 Aligned_cols=325 Identities=15% Similarity=0.194 Sum_probs=197.3
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHH-HH-----HHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLF-IA-----GFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK 119 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~-~~-----~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~ 119 (416)
+.........+.. |.. ++++.++.+.+... +. ..+...+++++.|+++||+|||+.++.+.....++.+ +.
T Consensus 26 ~~~~d~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~ 104 (434)
T PRK15075 26 LEMFDFFLFGFYA-TAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIA 104 (434)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHH
Confidence 3333334455555 555 88999887765432 22 2333457889999999999999999999999999888 88
Q ss_pred cchhHH--------HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 014905 120 HSSEYK--------ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL 188 (416)
Q Consensus 120 ~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 188 (416)
++++++ .+++.|+++|++.+...+.... +++|. ++|++..++.+...+.+..+|..++..+.+.+.+.
T Consensus 105 ~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~ 183 (434)
T PRK15075 105 FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSV-YLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA 183 (434)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHH-HHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 888876 4689999999999998888888 88876 77888866665555555555553333443333333
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 014905 189 LVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFL 268 (416)
Q Consensus 189 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
..+.. |||++|++......+. .......||+++.. +++.+++.++.++...++++.+.......+.+...+.....
T Consensus 184 ~~~~~--gWr~~f~~~~~~~~~~-~~~~~~~~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (434)
T PRK15075 184 QMAEW--GWRIPFLIGCLIVPFI-FLIRRSLEETEEFL-ARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITV 259 (434)
T ss_pred HHhcc--chHHHHHHHHHHHHHH-HHHHHhcCCCHHHH-HhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 9999998755433222 11111223321100 01001111222333445555544433333333222333444
Q ss_pred hhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH-HhhccCCCCCCCCC
Q 014905 269 WTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPI-LTNFLETPPDVRGG 344 (416)
Q Consensus 269 ~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 344 (416)
|.|.|.++..+.+ .+.......++.+++.++.+++.|| .++|+................. .... .+
T Consensus 260 ~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr--~g~r~~~~~~~~~~~~~~~~~~~~~~~--------~~ 329 (434)
T PRK15075 260 YTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR--IGRRPVLIAFTVLAILTAYPALSWLVA--------AP 329 (434)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHHHHHc--------CC
Confidence 8999988755553 4555666678888999999999999 7777765554333322111111 1111 00
Q ss_pred CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee
Q 014905 345 GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
+.........+.+++.+...+....+..|.+|++.|+++.++.+
T Consensus 330 ----~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~ 373 (434)
T PRK15075 330 ----SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAY 373 (434)
T ss_pred ----chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHH
Confidence 12222233444556667777777788999999999999999853
No 34
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=2.9e-26 Score=215.30 Aligned_cols=322 Identities=15% Similarity=0.067 Sum_probs=220.0
Q ss_pred HhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHH
Q 014905 54 WLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGR 131 (416)
Q Consensus 54 ~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r 131 (416)
....+.. |.+ +++|.|+.+.|++.+++.++..+++++.|+++||+|||+.+..+.+...++.. ..++++++.+++.|
T Consensus 11 ~~~~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (399)
T TIGR00893 11 ANLSFAA-PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR 89 (399)
T ss_pred HhhhHhH-HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 3444444 445 89999999999999999999999999999999999999999999888888877 77888999999999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 132 IFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
++.|++.+...+.... ++.|. ++|++..+.. ..+..+|. .+++.+++.+.+.. +||+.|.+.++..
T Consensus 90 ~l~g~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~--~~~~~~~~~~~~~ 158 (399)
T TIGR00893 90 VLLGAAEAPFFPGIIL-IVASWFPASERATAVSIF----NSAQGLGG----IIGGPLVGWILIHF--SWQWAFIIEGVLG 158 (399)
T ss_pred HHHHHHHHhhhhHHHH-HHHHhCCHHHHHHHHHHH----HHhchHHH----HHHHHHHHHHHHhC--CchHHHHHHHHHH
Confidence 9999999999888888 88876 5677764444 33333444 66667777777666 9999999988877
Q ss_pred HHHHHHHHHhcccCCCCccc--hhhHH-----------------HhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhh
Q 014905 209 AFGMVIILASWTENYGDPEK--KNLLA-----------------QFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLW 269 (416)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (416)
++..+......||++++++. ++.++ +.+++.++.+|+|+++.......+.......... +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 237 (399)
T TIGR00893 159 IIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLT-W 237 (399)
T ss_pred HHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHH-H
Confidence 77666655455554432111 00000 0112355677888887776666666666665444 8
Q ss_pred hcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchh--HHHHHHH--HHHHHHHHHHHhhccCCCCCCC
Q 014905 270 TPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVES--YMQIVFI--ISSASLLIPILTNFLETPPDVR 342 (416)
Q Consensus 270 ~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 342 (416)
.|.|.++..+.+ .+.......++.+++.++.+++.|| .++|+ ....... ................
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 309 (399)
T TIGR00893 238 FPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL--LLRRGKSLVFARKTAIIAGLVLSLLMFATNYV------ 309 (399)
T ss_pred HHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH--HhhcccchhHHHHHHHHHHHHHHHHHHHhccc------
Confidence 888887655543 6777778888899999999999999 55553 1111111 1111111111111100
Q ss_pred CCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 343 GGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
. +.+.......+..+..+ ..+...++.+|.+|+++|++++|+.+...++...++
T Consensus 310 -~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~ 363 (399)
T TIGR00893 310 -N----IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVG 363 (399)
T ss_pred -h----hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhh
Confidence 0 12222222233333333 688899999999999999999999988777765543
No 35
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=212.23 Aligned_cols=317 Identities=18% Similarity=0.138 Sum_probs=205.7
Q ss_pred HHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHH
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILM 128 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~ 128 (416)
.......+.. |.+ +++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.+..+++.+ ..++++++.++
T Consensus 32 ~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~ 110 (426)
T PRK12307 32 FDFMLIFYIM-YLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLT 110 (426)
T ss_pred hHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3334445555 555 79999999999999999999999999999999999999999999999999888 88889999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
++|++.|++.+...+.... ++.|. ++|++..++. ..+..+|. ++++.+.+.+.+.. +||+.|++..
T Consensus 111 ~~r~l~G~g~g~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~lg~----~~~~~l~~~l~~~~--~w~~~f~i~~ 179 (426)
T PRK12307 111 LSRFIVGMGMAGEYACAST-YAVESWPKHLKSKASAFL----VSGFGIGN----IIAAYFMPSFAEAY--GWRAAFFVGL 179 (426)
T ss_pred HHHHHHHHHHhhHHHHHHH-HHHHhCCHhHhhHhhhHH----HHHHhHHH----HHHHHHHHHHcccC--CHHHHHHHHH
Confidence 9999999999988888888 88866 5677764443 33444444 66666666666665 9999998765
Q ss_pred HHHHHHHHHHHHhcccCCCCccch--h---h----HHHhhhHHHhhhcchhHHHHHHHH---HHHHHHHHHHHHhhhccc
Q 014905 206 CFLAFGMVIILASWTENYGDPEKK--N---L----LAQFKGAALAIASDERIALLGAIQ---SLFEGSMYTFVFLWTPAL 273 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~--~---~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 273 (416)
...++...+ ....||+++.++++ + . .+..+.+.++++|+++........ .......+. ...+.|.|
T Consensus 180 ~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 257 (426)
T PRK12307 180 LPVLLVIYI-RARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWP-IFGLLPTY 257 (426)
T ss_pred HHHHHHHHH-HHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 443332222 22234432211000 0 0 001122456777776655432221 111222222 22377877
Q ss_pred ccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccch
Q 014905 274 SPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSG 350 (416)
Q Consensus 274 ~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (416)
.++. +.+ .+...+...++.+++.++.+++.|| .++++....+.....+.......... +.
T Consensus 258 ~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr--~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 320 (426)
T PRK12307 258 LAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADR--IGLKKTFSIGLLMSFLFIFPLFRIPQ--------------DN 320 (426)
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHHcc--------------cc
Confidence 7653 343 5667777788999999999999999 67666665555444333322222221 11
Q ss_pred hHHHHHHHHHHHhh--hcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 351 SLQLIGFSTFEACV--GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 351 ~~~~~~~~l~~~~~--g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
. ......+++... ....+....++.|.+|++.||+++|+.+...++..
T Consensus 321 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~ 370 (426)
T PRK12307 321 Y-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSG 370 (426)
T ss_pred H-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHH
Confidence 1 222223333322 22345566788999999999999998766555543
No 36
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.95 E-value=3.2e-25 Score=208.31 Aligned_cols=323 Identities=13% Similarity=0.070 Sum_probs=216.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
..........|.+ |.+ +++|.|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+.....++.+ ...+++++
T Consensus 19 ~~~~~~~~~~p~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 97 (394)
T PRK11652 19 VGQMAQTIYVPAI-ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLT 97 (394)
T ss_pred HHHHHHHHHhccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH
Confidence 4445556667777 555 89999999999999999999999999999999999999999999888888877 77788999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|++.|++.+...+.... +..|. +++++. . .....+..+|. .++|.+++.+.+.. +||..|+
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~~~----~~g~~i~~~l~~~~--g~~~~f~ 166 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMART-LPRDLYEGTQLRHA---N-SLLNMGILVSP----LLAPLIGGLLTTLF--GWRACYL 166 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHH-HHHHhcCHHHHHHH---H-HHHHHHHHHHH----HHHHHHHHHHHhcc--ChHHHHH
Confidence 9999999999998877666555 66654 333333 2 33444444444 77888888777765 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc-
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP- 281 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (416)
+.++..++..+......||+++++++ +++.++++++.+|+|+.+...............+.. +.+.+.++..+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 242 (394)
T PRK11652 167 FLLLLGAGVTFSMARWMPETRPADAR---RTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEA-CSGVLMGAVLGLSS 242 (394)
T ss_pred HHHHHHHHHHHHHHHhCCccCccccc---hhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHcCCCH
Confidence 98877666555555456665433222 222455677888888766543333333333333222 5555665544443
Q ss_pred --hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHH
Q 014905 282 --HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFST 359 (416)
Q Consensus 282 --~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (416)
.+.......++.++++.+.+++.|| .+.+....................... . +.+.......+
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~ 308 (394)
T PRK11652 243 MTVSILFILPIPAAFFGAWFAGRPNKR--FSTLMWQSVICCLLAGLLMWIPGWFGV--------M----NVWTLLVPAAL 308 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcc--------c----cHHHHHHHHHH
Confidence 5666667788888899999999999 432221211121122111111111100 0 33445566677
Q ss_pred HHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 360 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 360 ~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+++.+...|...+...|..| +++|++.++.+...++...+
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~ 349 (394)
T PRK11652 309 FFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGL 349 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHH
Confidence 788888889999999989887 46899888887666654433
No 37
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=4.2e-25 Score=207.10 Aligned_cols=326 Identities=17% Similarity=0.164 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHH-HHHHHHHhhhh
Q 014905 41 SYIIVYSLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACV-TYCITYMLSCV 117 (416)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~l 117 (416)
.+++..++...+..+..|.+ +.+ +++|.|++++|++.+...+...+.+++.|.++||+||||.++ .+.+...++..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~-~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTL-SIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence 44555558888888889998 655 789999999999988766655555555555599999998754 44555555555
Q ss_pred -hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcc
Q 014905 118 -TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLAL 195 (416)
Q Consensus 118 -~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~ 195 (416)
..++++++.+++.+.+.+...+...+...+ +..|. ++|++.....++....+..+|. +++|.+++.+.+..
T Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lg~----~~g~~i~~~l~~~~-- 170 (393)
T PRK15011 98 LFAWNRNYFVLLFVGVFLSSFGSTANPQMFA-LAREHADKTGREAVMFSSFLRAQVSLAW----VIGPPLAYALAMGF-- 170 (393)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhhhccchHHHHHHHHHHHHHHHH----HHhhHHHHHHHHhc--
Confidence 667888888766655555444555666666 66665 5555543333344455555556 88889999888776
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchh-HHHHHHHHHHHHHHHHHHHHhhhcccc
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDER-IALLGAIQSLFEGSMYTFVFLWTPALS 274 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (416)
|||..|++.++..++..+......||.++++++++ + . .+...++++ .+.............+.+. .+.|.|.
T Consensus 171 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l 243 (393)
T PRK15011 171 SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT-G--T---LEAPRRNRRDTLLLFVICTLMWGTNSLYI-INMPLFI 243 (393)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc-c--c---ccccccccccHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 99999999888777776666655676543322111 0 0 111222322 2322222233333333323 3788887
Q ss_pred cCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchh
Q 014905 275 PNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGS 351 (416)
Q Consensus 275 ~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (416)
++..+.+ .+.+.....++.+++.++.+++.|| .+.|+.+..........+. ...... +.+
T Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr--~g~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~ 306 (393)
T PRK15011 244 INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR--LGKRFLMRVAAVAGVCFYA-GMLMAH--------------SPA 306 (393)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHH-HHHHHh--------------hHH
Confidence 7655543 5666666667778889999999999 7777655544333332222 211121 334
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 352 LQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 352 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
.......+.++..+...+....+.+|..|++ |++++++.+...++..
T Consensus 307 ~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 307 ILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGW 353 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHH
Confidence 4444555555666666666677788988864 8999998776555543
No 38
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=6.6e-25 Score=206.65 Aligned_cols=325 Identities=14% Similarity=0.152 Sum_probs=214.3
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHH
Q 014905 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKI 126 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~ 126 (416)
.......+..|.++.+-+++|.|.++.++..+++.++..+++++.|+++||+|||+++..+.....++.+ +..+++++.
T Consensus 27 ~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~ 106 (413)
T PRK15403 27 AAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQ 106 (413)
T ss_pred HHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3445566777888333389999999999999999999999999999999999999999999999888888 888999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA 203 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~ 203 (416)
++++|+++|++.+...+.... ++.|. ++|++.. +....+..+|. .++|.+++.+.+.. +||+.|++
T Consensus 107 l~~~r~l~Gi~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~g~~lg~~l~~~~--gw~~~f~~ 175 (413)
T PRK15403 107 FLIARFIQGTSICFIATVGYV-TVQEAFGQTKGIKLM----AIITSIVLVAP----IIGPLSGAALMHFV--HWKVLFAI 175 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHH----HHHHHHHHHHH----HHHHHHHHHHHHhc--CHHHHHHH
Confidence 999999999998865555555 66555 3344443 33333334444 66777777777665 99999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc--
Q 014905 204 AACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-- 281 (416)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (416)
.++..++..+......||++++++++...++..+++++++|||+++...+...+.....+.+.. +.|.+.++..+.+
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~-~~P~~l~~~~g~s~~ 254 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVA-VSPVILIDAGGMTTS 254 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHhcCCCHH
Confidence 9888777766655456776543222211233345678889999998876666666666665444 7888888765554
Q ss_pred -hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHH
Q 014905 282 -HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTF 360 (416)
Q Consensus 282 -~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (416)
.++.......+..++..+.+++.+| ...+|.......+......+.........+ +.+..+....+.
T Consensus 255 ~~gl~~~~~~~~~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~----------~~~~~~~~~~l~ 322 (413)
T PRK15403 255 QFAWTQVPVFGAVIVANAIVARFVKD--PTEPRFIWRAVPIQLVGLALLIVGNLLWPH----------VWLWSVLGTSLY 322 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc--CCchhHHHHHHHHHHHHHHHHHHHHHHccc----------cHHHHHHHHHHH
Confidence 5666666677777888888887655 333333222211111111111111000000 222345566677
Q ss_pred HHhhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 361 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 361 ~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
+++.+...|......-+ -++..+|++.|+.+.....
T Consensus 323 ~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~ 358 (413)
T PRK15403 323 AFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILM 358 (413)
T ss_pred HHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHH
Confidence 78888877777743321 1222368877777655443
No 39
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.5e-25 Score=213.94 Aligned_cols=327 Identities=13% Similarity=0.078 Sum_probs=226.6
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+.........+.+ |.+ +++|.|+.+.+++.+.+.++..++.+++|+++||+|||++++.+.....++.+ +.++++++
T Consensus 21 ~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 99 (471)
T PRK10504 21 MQSLDTTIVNTAL-PSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLN 99 (471)
T ss_pred HHHHhHHHHHHHH-HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 4444555667777 666 89999999999999999999999999999999999999999999888888777 77888999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|+++|++.+...+...+ ++.|. ++|+... +....+..+|. .++|.+++.+.+.. +||+.|.
T Consensus 100 ~l~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~g~----~~g~~~~g~l~~~~--gw~~~f~ 168 (471)
T PRK10504 100 ELLLARVLQGVGGAMMVPVGRL-TVMKIVPREQYMAAM----TFVTLPGQVGP----LLGPALGGLLVEYA--SWHWIFL 168 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHHH-HHHHHcCHHHHHHHH----HHHHHHHHHHH----HhhhHHHHHHHhhc--cHHHHHH
Confidence 9999999999999998888777 77766 4445442 33333334444 77778888888776 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccchhhH----------------------------------------------H-Hh
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKKNLL----------------------------------------------A-QF 235 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~-~~ 235 (416)
+......+..+......|+.+.++++.+.. + +.
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 988777666665554444432221110000 0 00
Q ss_pred hh--HHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhccccc
Q 014905 236 KG--AALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLR 310 (416)
Q Consensus 236 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~ 310 (416)
++ .-.+++|||++.......++....... ...+.|.|.++..+.+ .++......++.+++.++.+++.|| .+
T Consensus 249 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r--~g 325 (471)
T PRK10504 249 NRALFSLKLFRTRTFSLGLAGSFAGRIGSGM-LPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR--FG 325 (471)
T ss_pred CCCccCHHHhcccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cC
Confidence 00 011356777776665555555444433 3337788877644443 6677777778888888999999999 77
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeee
Q 014905 311 VESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 390 (416)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~ 390 (416)
+|+.+..+.....+........... . +.+.......+.+++.+...+..+....+.+|++.+++++|+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 393 (471)
T PRK10504 326 YRRVLVATTLGLALVSLLFMLVALL--------G----WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSL 393 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccc--------c----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHH
Confidence 7777766665555443333322210 0 222233445566677787888888999999999999999999
Q ss_pred eecccceeeee
Q 014905 391 FRIPLNVFVCI 401 (416)
Q Consensus 391 ~~~~~~~~~~~ 401 (416)
.+...++...+
T Consensus 394 ~~~~~~~g~~i 404 (471)
T PRK10504 394 LSMIMQLSMSI 404 (471)
T ss_pred HHHHHHHHHHH
Confidence 88776665444
No 40
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=3.7e-26 Score=213.36 Aligned_cols=326 Identities=11% Similarity=0.024 Sum_probs=216.9
Q ss_pred HHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHH
Q 014905 52 GDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILML 129 (416)
Q Consensus 52 ~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~ 129 (416)
......+.. |.+ +++|.|+.+.|++.+...++..+++++.|+++||+|||+.+..+.+...++.+ ..++++++.+++
T Consensus 10 ~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (379)
T TIGR00881 10 VRKNFALAM-PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAA 88 (379)
T ss_pred hHHhhhhhh-HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 333444455 444 78999999999999999999999999999999999999999999998888888 788899999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHH-HHHHHHHhhhccCchhHHHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISG-LFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~-~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
.|++.|++.+...+...+ ++.|. ++|++..++.+.. ..+|. .+++ .++..+.+.. +||..|++.+
T Consensus 89 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~----~~~g~----~~~~~~~~~~~~~~~--~~~~~~~~~~ 157 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGR-TVTKWFSRSERGTWVSFWNCS----HNVGG----GLLPPLVLFGIAELY--SWHWVFIVPG 157 (379)
T ss_pred HHHHHHhhccccCCchHH-HHHHhcCHhhheeeEeehhcc----chhHH----HHHHHHHHHHHHhcC--CchhHHHHHH
Confidence 999999999998888888 88766 5677775544333 33334 5555 3444444554 9999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCcc-----c--hhh-------H----HHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014905 206 CFLAFGMVIILASWTENYGDPE-----K--KNL-------L----AQFKGAALAIASDERIALLGAIQSLFEGSMYTFVF 267 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-----~--~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (416)
.+.++..+......||++++++ + ++. + +..+...++.+|+|.++...+...+..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILD 237 (379)
T ss_pred HHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 7776665555545554332110 0 000 0 11122345667788877776666655555555444
Q ss_pred hhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 014905 268 LWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGG 344 (416)
Q Consensus 268 ~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (416)
+.|.|.++..+.+ .+.......++.+++.++.+++.||. .+.++..................... . ..
T Consensus 238 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~ 308 (379)
T TIGR00881 238 -WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKL-FNGRRGPLAVFFMALIIVSLLVYWLN-P------AA 308 (379)
T ss_pred -HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHH-cCCcchHHHHHHHHHHHHHHHHHhcC-c------ch
Confidence 8888887654543 67777888899999999999999983 22222222211111111111111110 0 00
Q ss_pred CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 345 GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+.+.......+.++......+....+.+|.+|+++|+++.|+.+...++...++
T Consensus 309 ----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 362 (379)
T TIGR00881 309 ----NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILA 362 (379)
T ss_pred ----hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhh
Confidence 223333444455554444556667788999999999999999988777765543
No 41
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=4.6e-25 Score=206.60 Aligned_cols=318 Identities=15% Similarity=0.093 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-h
Q 014905 42 YIIVYSLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-T 118 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~ 118 (416)
+....++...+.....|++ |.+ +++|+|+.++|++.+.+.+...+++++.|+++||+|||+++.++.+...++.+ .
T Consensus 12 l~~~~~~~~~g~~~~~~~l-~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 12 LLASSLLLTIGRGATLPFM-TIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3334446777788888998 555 68999999999999999999999999999999999999999999888888877 7
Q ss_pred ccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcc
Q 014905 119 KHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLAL 195 (416)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~ 195 (416)
.++++++.+++.|.+.|.+.+...+...+ +..|. ++|++..++. .....+|. .++|.+++.+.+ .
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~----~~~~~lg~----~igp~l~~~l~~-~-- 158 (395)
T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKA-WFADNLSSTSKTKIFSLN----YTMLNIGW----TVGPPLGTLLVM-Q-- 158 (395)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHhHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHH-h--
Confidence 78889999998998888877777776777 66654 4566653333 22333444 666777776664 3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
+|+.+|.+.++..++..+......||+++++++++ + ...+.++.+|||+++.......+.......+.. +.+.|..
T Consensus 159 g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 234 (395)
T PRK10054 159 SINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET-G--SVWSPSVLLQDKALLWFTCSGFLASFVSGAFAS-CISQYVM 234 (395)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhccccccccch-h--hhhhhhhhccCceehHHHHHHHHHHHHHHHhhh-hHHHHHH
Confidence 89999998888777766555544544432221111 1 112236678888877765555554443332222 3344432
Q ss_pred C--CCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccch
Q 014905 276 N--DEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSG 350 (416)
Q Consensus 276 ~--~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (416)
+ +.+.+ .+.......+.........+++.|| .+.++.+..+..+..+.......... +.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~ 298 (395)
T PRK10054 235 VVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA--ANIRPLMTAGTLCFVIGLVGFIFSGN--------------SL 298 (395)
T ss_pred HhcccchHHHHHHHHHHhhhhheeeehhHHHHHHcc--CCchhHHHHHHHHHHHHHHHHHHcch--------------HH
Confidence 2 22222 4556666666666677888899998 66666665555444433333322221 34
Q ss_pred hHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee
Q 014905 351 SLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
+...+...+.+++.+...|...+.+.+..|++.|++.++..+
T Consensus 299 ~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 340 (395)
T PRK10054 299 LLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS 340 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH
Confidence 445556667777777778888899999999999999887543
No 42
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.95 E-value=4.6e-25 Score=205.20 Aligned_cols=328 Identities=14% Similarity=0.113 Sum_probs=216.8
Q ss_pred HHHHHHHhHHHHHHHH-H-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch-h
Q 014905 48 LMMAGDWLQGPYVYYL-Y-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS-E 123 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l-~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~-~ 123 (416)
+.........|+. |. + +++|+|+.+.+++.+.+.++..+++++.|+++||+|||+.+.++.+...++.+ ..+++ +
T Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~ 90 (366)
T TIGR00886 12 LSFSVWFAFSPLA-VQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQS 90 (366)
T ss_pred HHHHHHHHhHHhh-hHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4455556667777 53 5 89999999999999999999999999999999999999999999999988888 77888 9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh----ccC
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL----ALG 196 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~----~~~ 196 (416)
++.+++.|+++|++.+. .+.... +++|. ++|++..++.....+.|..+|. .+++.+.....+.. ..+
T Consensus 91 ~~~~~~~~~~~g~~~~~-~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~----~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 91 YSVLLLLRLFIGIAGGS-FASCMP-WISFFFPKKIQGTALGLAAGWGNMGGGVAQ----FVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHHHHHHHHHHHHhchh-hHhHHH-HHHHhcCHhhhhHHHHHHHHHhHHHHHHHH----HHHHHHHHHHHhccccccccc
Confidence 99999999999998664 455566 77765 6677775555444444444444 55555544332210 127
Q ss_pred chhHH-HHHHHHHHHHHHHHHHhcccCCCCccchhhHH----------HhhhHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 014905 197 PVAPF-DAAACFLAFGMVIILASWTENYGDPEKKNLLA----------QFKGAALAIASDERIALLGAIQSLFEGSMYTF 265 (416)
Q Consensus 197 w~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (416)
||+.| ...++...+..++.....+|+++++++++..+ +..+..++.+++|+.+...+...+.....+..
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGV 244 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHH
Confidence 99998 44454444444444434444433221111000 00114556777877776655555444444443
Q ss_pred HHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 014905 266 VFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVR 342 (416)
Q Consensus 266 ~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (416)
.. +.|.|.++..+.+ .+.......+..+++.++.+++.|| .++|+.....................
T Consensus 245 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~~~~~~~~~~~~-------- 313 (366)
T TIGR00886 245 SS-IFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR--LGGARKLLMSFLGVAMGAFLVVLGLV-------- 313 (366)
T ss_pred HH-HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh--hccchhHHHHHHHHHHHHHHHHhcCC--------
Confidence 33 7888887655543 6667777788888999999999999 77766665555444433333322221
Q ss_pred CCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 343 GGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
... +.+.......+..+..|...+..+....+..| +++|+++|+.+...++
T Consensus 314 ~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 314 SPL---SLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNL 364 (366)
T ss_pred Ccc---hHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccC
Confidence 000 12334455556667777777788888888887 5899999988766654
No 43
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=4.2e-25 Score=207.74 Aligned_cols=338 Identities=13% Similarity=0.161 Sum_probs=213.3
Q ss_pred hhHHHHHHHH---HHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh
Q 014905 38 FMNSYIIVYS---LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML 114 (416)
Q Consensus 38 ~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (416)
++|.+...+. +...+++...+++++..+++|.|+++.|++.+.+.++..+++++.|+++||+||||.+..+.....+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~ 90 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCV 90 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 4444444333 5666777777788454489999999999999999999999999999999999999999999887777
Q ss_pred hhh-h---cc-chhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHH
Q 014905 115 SCV-T---KH-SSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFG 186 (416)
Q Consensus 115 ~~l-~---~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~ 186 (416)
+.+ . .. .++++.+++.|++.|++.+...+...+ .+.+. ++|+++.+..+...+.|. . .++|.++
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~---~----~~g~~~~ 162 (402)
T TIGR00897 91 GHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLV-WVVYNTKQDNLSSAVGWFWAVYSIGI---G----VFGSYYS 162 (402)
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHH---H----HHHHHHH
Confidence 654 3 23 357888899999999998877666565 55443 778888665544433332 1 3455666
Q ss_pred HHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCc--cchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 014905 187 NLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDP--EKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYT 264 (416)
Q Consensus 187 ~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (416)
+.+.+.. ||+..++.......+..++.....+|.++++ ++++..++.++..++++|+|+++.......+.....+.
T Consensus 163 ~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (402)
T TIGR00897 163 SYAIPAF--GEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFG 240 (402)
T ss_pred Hhccccc--chHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHH
Confidence 6666555 7655555443333333333332333332111 11111222334566788999888776665555555555
Q ss_pred HHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHH-HHHHHHHHHHHHHHhhccCCCCC
Q 014905 265 FVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQI-VFIISSASLLIPILTNFLETPPD 340 (416)
Q Consensus 265 ~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 340 (416)
+.. +.|.|.++ .+.+ .+.......++..++.+..+++.|| .++|+.... ......+.............+
T Consensus 241 ~~~-~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr--~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~-- 314 (402)
T TIGR00897 241 FAV-FLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK--LGWMNTVRWFGGVGCGIFTLALYYIPQHFGH-- 314 (402)
T ss_pred HHH-HHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhHHHHHHHHHHHHHHHHHHHHHHccCC--
Confidence 444 88988765 4443 5666677788999999999999999 666655432 222222221121111110000
Q ss_pred CCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 341 VRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.+...+...+.+++.+...+ ......|.. +++||+++|+.+...++...+
T Consensus 315 --------~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~ 365 (402)
T TIGR00897 315 --------SFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFL 365 (402)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHH
Confidence 334445556666766665544 345566654 458999999988877765443
No 44
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=6e-25 Score=205.28 Aligned_cols=317 Identities=13% Similarity=0.153 Sum_probs=218.5
Q ss_pred HHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHH
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILM 128 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~ 128 (416)
++..+..|.+ |.+ +++|.|+++++++.+++.++..+++++.|+++||+|||+.+..+.....++.. ....++++.++
T Consensus 5 ~~~~~~~p~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPAL-PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred hHHHHHhccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 4556777888 555 89999999999999999999999999999999999999999999988888888 77888999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
+.|++.|++.+...+...+ ++.|. ++|++..++. ..+..+|. .++|.+++.+.+.. +||..|++.+
T Consensus 84 ~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~--~~~~~~~~~~ 152 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINA-LMRDMFPKEEFSRMMSFV----TLVMTIAP----LLAPIIGGWLLVWF--SWHAIFWVLA 152 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHc--ChHHHHHHHH
Confidence 9999999999988887787 77766 5566664333 33333444 67777777777765 9999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCccchh-hHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC---c
Q 014905 206 CFLAFGMVIILASWTENYGDPEKKN-LLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---P 281 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 281 (416)
...++..+......||+++++++++ ..++..++.++.+++|+.+...+...+.....+.+.. +.|.+..+..+. +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 153 LAAILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLT-AGPFVYIELNGVSPQN 231 (377)
T ss_pred HHHHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHhCCCHHH
Confidence 8877776666555666543322211 1222334566788888877665555444444444333 566666554444 3
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.+.......++.+++.+..+++.|| .+.|+....+.................. . +.+.......+..
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r--~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~ 298 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRR--VGALNMLRFGLWIQFIMGIWLVVSALLD-L----------GFWALVVGVAAFV 298 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHHHh-h----------hHHHHHHHHHHHH
Confidence 6778888889999999999999999 7777766665544332222111111100 0 2233333333444
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeeeeecc
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 394 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~ 394 (416)
...+...+.......|..| +.++++.++.+..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 330 (377)
T PRK11102 299 GCVSMISSNAMAVILDEFP-HMAGTASSLAGTL 330 (377)
T ss_pred HHHHHhhHHHHHHHhcccc-ccchHHHHHHHHH
Confidence 4444555555666777776 7889988876543
No 45
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=2.1e-25 Score=209.80 Aligned_cols=315 Identities=17% Similarity=0.161 Sum_probs=213.4
Q ss_pred HhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHH
Q 014905 54 WLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGR 131 (416)
Q Consensus 54 ~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r 131 (416)
....++. |.+ +++|.|+.+.|++.+...++..+++++.|+++||+|||+.+..+.....++.+ ....++++.+++.|
T Consensus 34 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (398)
T TIGR00895 34 AAMGFAA-PAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILR 112 (398)
T ss_pred HHHHhhH-HHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Confidence 3444555 555 89999999999999999999999999999999999999999999888888777 77888999999999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 132 IFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
++.|++.+...+...+ ++.|. ++|++..+.. ..+..+|. .+++.+++.+.+.. +|+..+++.++..
T Consensus 113 ~~~g~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~--g~~~~~~~~~~~~ 181 (398)
T TIGR00895 113 FLAGLGLGGLMPNLNA-LVSEYAPKRFRGTAVGLM----FCGYPIGA----AVGGFLAGWLIPVF--GWRSLFYVGGIAP 181 (398)
T ss_pred HHHhcccccchhhHHH-HHHHHcCHHhhchhHhhH----hhHHHHHH----HHHHHHHHHHhhcc--cceeehhhhhhHH
Confidence 9999999998888888 88876 5677774444 33334444 66667777777665 9999999887666
Q ss_pred HHHHHHHHHhcccCCCCc--c-chh-------------------------hHHHhhhHHHhhhcc---hhHHHHHHHHHH
Q 014905 209 AFGMVIILASWTENYGDP--E-KKN-------------------------LLAQFKGAALAIASD---ERIALLGAIQSL 257 (416)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~--~-~~~-------------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 257 (416)
.+..+......||+++.. + +++ .++..++..+..+++ ++.+.......+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (398)
T TIGR00895 182 LLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFM 261 (398)
T ss_pred HHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHH
Confidence 655555554555543210 0 000 000011112223322 222222222233
Q ss_pred HHHHHHHHHHhhhcccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhc
Q 014905 258 FEGSMYTFVFLWTPALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNF 334 (416)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (416)
.....+. ...+.|.+.++ .+. ..+.......++.+++.++.+++.|| .+.+ ..........+..........
T Consensus 262 ~~~~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 336 (398)
T TIGR00895 262 LLVGVYF-LTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADR--LGPR-VTALLLLLGAVFAVLVGSTLF 336 (398)
T ss_pred HHHHHHH-HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cchH-HHHHHHHHHHHHHHHHHHHhh
Confidence 3333333 33377744443 333 36777778889999999999999999 5555 333333333333322222121
Q ss_pred cCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 335 LETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
+.+......++.+++.+...+...++.+|.+|+++|++++|+.+...++..
T Consensus 337 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 387 (398)
T TIGR00895 337 --------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGA 387 (398)
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 345566677788888888899999999999999999999998877665543
No 46
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=1.2e-24 Score=208.54 Aligned_cols=325 Identities=12% Similarity=0.018 Sum_probs=205.9
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHH
Q 014905 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILML 129 (416)
Q Consensus 51 ~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~ 129 (416)
.......|..+++.+++|+|..+.+++.+.+.++..+++++.|+++||+|||+++..+.+..+++.+ ..++++++.+++
T Consensus 50 ~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 129 (476)
T PLN00028 50 VSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIA 129 (476)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3334556776444489999999999999999999999999999999999999999999888888877 778889999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh---ccCchhHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL---ALGPVAPFDA 203 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~---~~~w~~~f~~ 203 (416)
.|++.|++.+... .... +++|. ++|+.+.+..+...+.|..+|. .+.|.+...+.+.. ..|||+.|++
T Consensus 130 ~r~l~G~~~~~~~-~~~~-~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~----~~~~~i~~~~~~~~~~~~~gWr~~f~i 203 (476)
T PLN00028 130 VRFFIGFSLATFV-SCQY-WMSTMFNGKIVGTANGIAAGWGNLGGGVTQ----LLMPLVFPLIKDAGAPSFTAWRIAFFV 203 (476)
T ss_pred HHHHHHHHHHhhH-HHHH-HHHHhcChhheeHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcCCcchhhhHHHHHH
Confidence 9999999887643 3444 56665 5678875555333334444433 55555444332210 0289999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCccchhh------HHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 014905 204 AACFLAFGMVIILASWTENYGDPEKKNL------LAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPND 277 (416)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (416)
.+++.++..+...+..++.|+++.++.. +++..+.+++.+++++.+...+...+.....+.+.. +.|.|..+.
T Consensus 204 ~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~ 282 (476)
T PLN00028 204 PGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDN-IIAEYFYDR 282 (476)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHh-HHHHHHHHh
Confidence 9888877666665444443322100000 011123455667788877765554444333334333 788887665
Q ss_pred CCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccch------hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCccc
Q 014905 278 EEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVE------SYMQIVFIISSASLLIPILTNFLETPPDVRGGGISL 348 (416)
Q Consensus 278 ~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (416)
.+.+ .+...+...++.++++++.|+++||. +.| +.....................
T Consensus 283 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~--~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~-------------- 346 (476)
T PLN00028 283 FGLSLETAGAIAASFGLMNLFARPAGGYLSDVA--ARRFGMRGRLWALWIVQTLGGVFCIWLGRAN-------------- 346 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--HHhcCcchhHHHHHHHHHHHHHHHHHhcccc--------------
Confidence 5553 67777777888999999999999984 322 2222222221111111111111
Q ss_pred chhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 349 SGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
+.+...+.+++.+++.+...+..+++..+.. ++.+|++.|+.+...++..
T Consensus 347 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~ 396 (476)
T PLN00028 347 SLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGA 396 (476)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHH
Confidence 2333444555566665555555666666654 4689999999877665543
No 47
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.94 E-value=1.2e-24 Score=203.25 Aligned_cols=312 Identities=13% Similarity=0.072 Sum_probs=214.8
Q ss_pred HHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCch----HHHHHHHHHHHhhhh-hc
Q 014905 46 YSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRK----RACVTYCITYMLSCV-TK 119 (416)
Q Consensus 46 ~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr----~~l~~~~~~~~~~~l-~~ 119 (416)
++....+.++..|++ |.| +++|.|++++|++.+++.++..+++++.|+++||+||| +.+.+..... ... ..
T Consensus 13 ~~~~~~~~g~~~p~l-~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~ 89 (382)
T PRK11128 13 YFGYFFAYGVFLPFW-SVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHhhhH-HHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence 445556778999999 777 89999999999999999999999999999999999984 3333332222 222 34
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCch
Q 014905 120 HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPV 198 (416)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~ 198 (416)
..+++|.+++.|++.|++.+...+...+ +..+. ++|++..+.. ..+..+|. .++|.+++.+.+++ |||
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a-~~~~~~~~~~~a~~~~----~~~~~lg~----~igp~lgg~l~~~~--g~~ 158 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDA-LANTWQKQIGLDYGKV----RLWGSIAF----VIGSALTGKLVSWF--GEQ 158 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHH-HHHHHHhhccCCcchH----HHHHHHHH----HHHHHHHHHHHHHc--Chh
Confidence 5688999999999999998888887666 66655 5566653333 22223444 88889999988887 999
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 014905 199 APFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 278 (416)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (416)
..|++.++..++..+... ..||+++++++++.+++.++++++++|+|+++.......+.......... +.|.|.++ .
T Consensus 159 ~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~-~ 235 (382)
T PRK11128 159 AILWILTAGVASMLLGQL-LRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYG-FSAIYWQA-A 235 (382)
T ss_pred HHHHHHHHHHHHHHHHHH-ccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHH-HHHHHHHH-C
Confidence 999887765554443332 34443222111111112235678899999888776655555544433233 56667654 3
Q ss_pred CC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHH
Q 014905 279 EI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLI 355 (416)
Q Consensus 279 ~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (416)
+. ..|...+...++.++...+.+++.|| .+.++.+..+.....+....... .. +.+...+
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r--~~~~~~l~~~~~~~~~~~~~~~~-~~--------------~~~~~~~ 298 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRR--WSARDLLLLSAICGVVRWGLMGS-TT--------------ALPWLIV 298 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHh-hh--------------hHHHHHH
Confidence 33 26777777788888889999999999 77777766655555444333322 22 4566677
Q ss_pred HHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee
Q 014905 356 GFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 356 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
..++.+++.+...+....+..+. |++++++.++..+
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYS 334 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHH
Confidence 78888888888888888888886 5666788888765
No 48
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=7.2e-25 Score=205.66 Aligned_cols=312 Identities=13% Similarity=0.125 Sum_probs=204.2
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHH
Q 014905 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILML 129 (416)
Q Consensus 51 ~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~ 129 (416)
.......+.++++.+++|+|+++.+++.+...++..+++++.|+++||+|||+++..+.+...++.+ ..++++++.+++
T Consensus 21 ~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 100 (394)
T PRK03699 21 ALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSI 100 (394)
T ss_pred HHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHH
Confidence 3334556666444489999999999999999999999999999999999999999999888888887 778899999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-hhccCchhHHHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD-TLALGPVAPFDAAA 205 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-~~~~~w~~~f~~~~ 205 (416)
.|++.|++.+...+...+ ++.|. ++|+...+.. ..+..+|. .++|.+.+.+.+ .. +||++|.+.+
T Consensus 101 ~~~l~G~~~g~~~~~~~~-~i~~~~~~~~r~~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~~--gw~~~f~~~~ 169 (394)
T PRK03699 101 AMFVLGVVSGITMSIGTF-LITHVYEGKQRGSRLLFT----DSFFSMAG----MIFPIIAAYLLARSI--EWYWVYACIG 169 (394)
T ss_pred HHHHHHHhhHhhccchhH-HhhhhcccchHHHHHHHH----HHHHHHHH----HHHHHHHHHHHhccc--cHHHHHHHHH
Confidence 999999999988777777 77766 3455542222 22223333 566666665543 33 8999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---h
Q 014905 206 CFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---H 282 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (416)
+..++..++.....+++++++++++ + ++..++ ..+++++...+...+.....+.+.. |.|.|.++..+.+ .
T Consensus 170 ~~~~~~~~~~~~~~~p~~~~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~~ 243 (394)
T PRK03699 170 LVYVAIFILTLFSEFPALGKHAPKA-D---KPVAKE-KWGIGVLFLAIAALLYILAQLTFIS-WVPEYAQKKFGMSLEDA 243 (394)
T ss_pred HHHHHHHHHHHhcCCccccccCccc-c---Cccccc-cCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCChHHh
Confidence 7766655544322211111111111 0 111111 1234555554444444444444334 9999997765553 6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEA 362 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (416)
+...+...++..+++++.+++.|| .++++.+.....+..+...... ... +.+......++.++
T Consensus 244 ~~~~~~~~~~~~ig~~~~g~l~dr--~~~~~~l~~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~~G~ 306 (394)
T PRK03699 244 GNLVSNFWMAYMVGMWIFSFIVRF--FDLQRILTVLAGLALVLMYLFV-NTD--------------DPSHLLYAILGLGF 306 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHH-HcC--------------CchHHHHHHHHHHH
Confidence 777778888999999999999999 7777766555444433322222 121 23344455666777
Q ss_pred hhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 363 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 363 ~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
+.+..++...+...|..|++ +++..|......++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 340 (394)
T PRK03699 307 FSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTI 340 (394)
T ss_pred HHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhH
Confidence 77777777777777777654 45555555444343
No 49
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.94 E-value=3.2e-24 Score=200.48 Aligned_cols=305 Identities=11% Similarity=0.050 Sum_probs=204.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
..........|.+ |.+ +++|.|+++.|++.+...++..+++++.|+++||+|||+++..+....+++.+ ..+++|++
T Consensus 14 ~~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~ 92 (382)
T PRK10091 14 GLGMAEFGIMGVL-TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYL 92 (382)
T ss_pred HHHhhHHHHHhCh-HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 5566667777888 555 89999999999999999999999999999999999999999999999999888 88899999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|++.|++.+...+.... ++.|. ++|++.. +....+..+|. .++|.+++.+.+.. +||++|.
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~g~----~~g~~l~~~l~~~~--gwr~~f~ 161 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAI-VLSKIIKPGKVTAAV----AGMVSGMTVAN----LLGIPLGTYLSQEF--SWRYTFL 161 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHH-HHHHhCChHHhhHHH----HHHHHHHHHHH----HHhccHHHHHhhhc--cHHHHHH
Confidence 9999999999999987776666 66655 3455542 33333444444 77778888777765 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC--
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI-- 280 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 280 (416)
+.++..++..+......||.++++++ + .++.. +.+|+++.+.......+.....+.... +.+.+.++..+.
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~~~~~-~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~ 234 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRDEAKG-G----LREQF-HFLRSPAPWLIFAATMFGNAGVFAWFS-YIKPYMMFISGFSE 234 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccc-C----HHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCH
Confidence 98887776666555456665432211 1 11222 345666655553333333333333222 445555544444
Q ss_pred -chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHH
Q 014905 281 -PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFST 359 (416)
Q Consensus 281 -~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 359 (416)
..+.......++.+++.++.+++.|| .+.++.......+..+.......... +.+...+...+
T Consensus 235 ~~~~~~~~~~~~~~~ig~~~~g~l~~r--~~~~~~~~~~~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~ 298 (382)
T PRK10091 235 TSMTFIMMLVGLGMVLGNLLSGRLSGR--YSPLRIAAVTDFIIVLALLMLFFFGG--------------MKTASLIFAFI 298 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHheeccc--cCchhHHHHHHHHHHHHHHHHHHHHh--------------hHHHHHHHHHH
Confidence 36777888899999999999999999 77777666655554444333322221 22333444444
Q ss_pred HHHhhhcchh-HHHHHHhccCCcccccee
Q 014905 360 FEACVGIFWP-SIMKMRSQYIPEEARSTI 387 (416)
Q Consensus 360 ~~~~~g~~~~-~~~~~~~~~~p~~~rg~~ 387 (416)
.+.+.....+ .......+..|++.++++
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (382)
T PRK10091 299 CCAGLFALSAPLQILLLQNAKGGELLGAA 327 (382)
T ss_pred HHHHHHhhhHHHHHHHHHhCCcchHHHHH
Confidence 4444433333 333455555566666654
No 50
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=2.8e-24 Score=199.14 Aligned_cols=322 Identities=13% Similarity=0.035 Sum_probs=208.9
Q ss_pred hHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh-----CchHHH-HHHHHHHHhhhh-hccc---hh
Q 014905 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ-----GRKRAC-VTYCITYMLSCV-TKHS---SE 123 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~-----Grr~~l-~~~~~~~~~~~l-~~~~---~~ 123 (416)
+..+.+ |.+ +|+|+|.+++|+.... .+...+ .+++|+++||+ ||||.+ +.+.+..++... ..+. .+
T Consensus 6 ~~~~~~-~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 6 LVGNTL-PYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hHHhHH-HHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 445566 555 8999999999999755 455554 99999999998 899975 455555555544 4444 46
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc------
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA------ 194 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~------ 194 (416)
.+.+....++.+.+.+...++..+ ++.|. ++|+++.++..... .+|. ++++.+++.+.+..+
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~r~~~~~~~~~~~----~~G~----~~~~~l~~~l~~~~g~~~~~~ 153 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDA-WRLEILSDEELGYGSTIYIVGY----RAGM----LLSGSLALVLASPEFANTGLI 153 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHhhhchHHHHHHHHH----HHHH----HHHHHHHHHHhhhcccccccc
Confidence 677777788888888888888888 88866 67777755543333 3344 555555555554441
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc-chhhHHHhhhHHHhhhcchh---HHHHHHHHHHHHHHHHHHHHhhh
Q 014905 195 LGPVAPFDAAACFLAFGMVIILASWTENYGDPE-KKNLLAQFKGAALAIASDER---IALLGAIQSLFEGSMYTFVFLWT 270 (416)
Q Consensus 195 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 270 (416)
++||.+|++.++..++..+...+..||++++++ +++.+++.++++++++++|. .+...+...+.....+.... +.
T Consensus 154 ~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 232 (356)
T TIGR00901 154 TLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV-LT 232 (356)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 239999999988877766655544565432211 11112333456777777764 55554554555555555333 78
Q ss_pred cccccCCCCCc---hHHHHHHHH-HHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCc
Q 014905 271 PALSPNDEEIP---HGFIFATFM-LASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGI 346 (416)
Q Consensus 271 ~~~~~~~~~~~---~g~~~~~~~-~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (416)
|.|.++ .+.+ .+.+....+ ++.+++.++.+++.|| .+.++.+.....+..+.............. ++....
T Consensus 233 ~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 307 (356)
T TIGR00901 233 TLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP--LNILYALLLFGIVQALTNAGFVWLASNGHH-DGITFP- 307 (356)
T ss_pred HHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccc-
Confidence 888776 5554 455555444 5677899999999999 777777766665555444333322110000 000000
Q ss_pred ccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccc
Q 014905 347 SLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 396 (416)
Q Consensus 347 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~ 396 (416)
+.+.......+.+++.+..++...++.+|.+|+++||+.+|+.+...|
T Consensus 308 --~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 308 --HLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred --hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 234455566677888899999999999999999999999998766544
No 51
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=5.6e-25 Score=216.36 Aligned_cols=324 Identities=16% Similarity=0.111 Sum_probs=215.6
Q ss_pred HHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHH
Q 014905 56 QGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIF 133 (416)
Q Consensus 56 ~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l 133 (416)
..+.+ |.+ +++|++..+.+++.++..++.+++++++|+++||+|||+.+++++++.+++.+ ..++++++.++++|++
T Consensus 186 is~il-p~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l 264 (742)
T TIGR01299 186 VGFVL-PSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLL 264 (742)
T ss_pred HHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44455 555 79999999999999999999999999999999999999999999888888877 7788999999999999
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH-----HHhhhccCchhHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL-----LVDTLALGPVAPFDAAA 205 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~-----~~~~~~~~w~~~f~~~~ 205 (416)
.|++.+...+...+ +++|. ++|+...++++....+|..++..++..+.+..+.. .... .+||+.+++.+
T Consensus 265 ~G~g~g~~~p~~~~-~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~--~gWR~l~~i~~ 341 (742)
T TIGR01299 265 SGFGIGGAIPIVFS-YFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQF--HSWRVFVIVCA 341 (742)
T ss_pred HHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccc--ccHHHHHHHHH
Confidence 99999999998888 88877 66777755554555554444442222222211100 0011 27999988877
Q ss_pred HHHHHHHHHHHHhcccCCCCc----cch-------------------hhH-------HH------------hh-------
Q 014905 206 CFLAFGMVIILASWTENYGDP----EKK-------------------NLL-------AQ------------FK------- 236 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~----~~~-------------------~~~-------~~------------~~------- 236 (416)
+..++..+.. ++.||+|+.. +.+ +.+ +. ..
T Consensus 342 lp~ll~ll~~-~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (742)
T TIGR01299 342 FPCVFAIGAL-TFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRC 420 (742)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcc
Confidence 7666655444 4677775410 000 000 00 00
Q ss_pred ------------hHHHhhhcc---hhHHHHHHHHHHHHHHHHHHHHhhhcccccCC------------------------
Q 014905 237 ------------GAALAIASD---ERIALLGAIQSLFEGSMYTFVFLWTPALSPND------------------------ 277 (416)
Q Consensus 237 ------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 277 (416)
.+++.+++. ++.+.+.+..+...++.|.... |.|.+..+.
T Consensus 421 ~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~-w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (742)
T TIGR01299 421 FVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSV-WFPDMIKHLQADDYAALTKNFPGDKVAHFSFNF 499 (742)
T ss_pred hhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccccchhcccccc
Confidence 012233333 2333444455555666777555 888652110
Q ss_pred -----------C------C-------------------------------------------------------------
Q 014905 278 -----------E------E------------------------------------------------------------- 279 (416)
Q Consensus 278 -----------~------~------------------------------------------------------------- 279 (416)
. +
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (742)
T TIGR01299 500 TLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHN 579 (742)
T ss_pred chhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhcccccc
Confidence 0 0
Q ss_pred ---C------------chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 014905 280 ---I------------PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGG 344 (416)
Q Consensus 280 ---~------------~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (416)
- .......+..++.+++.++.+++.|| +++|+.+..+..+.++++++..+..
T Consensus 580 ~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr--~GRr~~l~~~~~lsai~~ll~~~~~----------- 646 (742)
T TIGR01299 580 KEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDK--IGRLRMLAGSMVLSCISCFFLSFGN----------- 646 (742)
T ss_pred CCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 0 01122334468889999999999999 7877777666666665554443332
Q ss_pred CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 345 GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+....++..++.+++.+..++....+++|.+|++.|++++|+.+...+++.+++
T Consensus 647 ----s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiig 700 (742)
T TIGR01299 647 ----SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLG 700 (742)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 234445555667777777888899999999999999999999887777765543
No 52
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=4.2e-24 Score=201.16 Aligned_cols=321 Identities=14% Similarity=0.127 Sum_probs=214.4
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+...+..+..|.+ |.+ +++|.|++++|++.+++.++..++++++|+++||+|||+.+..+.....++.+ ..++++++
T Consensus 17 ~~~~~~~~~~p~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 95 (401)
T PRK11043 17 LGFLATDMYLPAF-KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAA 95 (401)
T ss_pred HHHHHHHHHHhhH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 3445556667777 444 89999999999999999999999999999999999999999999888888877 77888999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
.+++.|+++|++.+...+...+ ++.|..++.+..+.. ........+|. .++|.+++.+.+.. +||..|++.+
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~g~~i~~~l~~~~--g~~~~~~~~~ 167 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAAVIWQA-LVIDRYPAQKANRVF-ATIMPLVALSP----ALAPLLGAWLLNHF--GWQAIFATLF 167 (401)
T ss_pred HHHHHHHHHHhhhHHHHHHHHH-HHHHhcCcHHHHHHH-HHHHHHHHHHH----HHHHHHHHHHHhcC--ChHHHHHHHH
Confidence 9999999999998877776666 777662222221222 22222223334 77888888888776 9999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---h
Q 014905 206 CFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---H 282 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (416)
+..++..+... ..+|+++++++ ++.+++.++.+|+|+.+.............+.+.. +.|.+.++ .+.+ .
T Consensus 168 ~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~-~g~s~~~~ 240 (401)
T PRK11043 168 AITLLLILPTL-RLKPSKKARKQ----SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLT-GSPFILEQ-MGYSPADI 240 (401)
T ss_pred HHHHHHHHHHH-HcCCCCCcccc----chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH-HhHHHHHH-cCCCHHHH
Confidence 77777666554 33433322111 12234677788888776554444444444444333 67777654 3443 5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEA 362 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (416)
|.......++.++++...+++.|| .+.++..........+.............+ +.+.......+.++
T Consensus 241 g~~~~~~~~~~~~g~~~~~~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 308 (401)
T PRK11043 241 GLSYVPQTIAFLVGGYGCRAALQK--WGGEQLLPWLLVLFAVSVIAIWLASLLSHP----------SLVPLLIPFCVMAA 308 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHHHHHhccC----------cHHHHHHHHHHHHH
Confidence 666666678888899999999999 666664433333222222211111100000 23444455667778
Q ss_pred hhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 363 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 363 ~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
+.+..+|...+...+..|+ +||++.|+.+...+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~ 342 (401)
T PRK11043 309 ANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLG 342 (401)
T ss_pred HHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHH
Confidence 8888888888877777764 799999998865443
No 53
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=1.8e-24 Score=206.46 Aligned_cols=313 Identities=11% Similarity=0.037 Sum_probs=197.2
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc----hhHHHHHHHHHHHH
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS----SEYKILMLGRIFGG 135 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~----~~~~~l~~~r~l~G 135 (416)
|.+ ++ |.|+.+.|++.+...++..+++++.|+++||+|||++++.+.+..+++.+ ..+. .+++.+++.|++.|
T Consensus 53 p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~g 131 (452)
T PRK11273 53 PYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCG 131 (452)
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHH
Confidence 444 56 99999999999999999999999999999999999999999888887766 5443 47888999999999
Q ss_pred hhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHH
Q 014905 136 IATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~ 212 (416)
++.+...+.... .+.|. ++|++..++. +.+..+|.. ..+|..+....... +||+.|++.+++.++..
T Consensus 132 i~~g~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~~---~~~~l~~~~~~~~~--gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 132 WFQGMGWPPCGR-TMVHWWSQKERGGIVSVW----NCAHNVGGG---LPPLLFLLGMAWFN--DWHAALYMPAFAAILVA 201 (452)
T ss_pred HHHhccchHHHH-HHHHhCChHHHHHHHHHH----HHHHHhhhh---HHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHH
Confidence 999888776666 66654 6677774443 333333321 22333322222223 89999999887777765
Q ss_pred HHHHHhcccCCCCc---cchh----------hHHH----hhhH-HHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 014905 213 VIILASWTENYGDP---EKKN----------LLAQ----FKGA-ALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALS 274 (416)
Q Consensus 213 ~~~~~~~~~~~~~~---~~~~----------~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (416)
++.....||++++. ++++ .+++ .++. .+.++|++.++...+...+.....+.... |.|.|+
T Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~P~~l 280 (452)
T PRK11273 202 LFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILD-WSPTYL 280 (452)
T ss_pred HHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 55555556544321 0000 0000 1111 12356788888876666666666666444 999999
Q ss_pred cCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHH-HHHHHHHHHHHHHHhhccCCCCCCCCCCcccch
Q 014905 275 PNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQI-VFIISSASLLIPILTNFLETPPDVRGGGISLSG 350 (416)
Q Consensus 275 ~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (416)
++..+.+ .+.......++.+++.++.+++.||...++++.... ...+..+.......... . +.
T Consensus 281 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~---------~----~~ 347 (452)
T PRK11273 281 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPA---------G----NP 347 (452)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcc---------c----Ch
Confidence 8765543 566666778888899999999999931133322222 11221211111111111 0 22
Q ss_pred hHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 351 SLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
+.........+.......+....+..|.+|++.||+++|+.+...++..
T Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 396 (452)
T PRK11273 348 TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGG 396 (452)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHH
Confidence 2223333333433222233344567799999999999999987766653
No 54
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=1.2e-24 Score=207.19 Aligned_cols=335 Identities=16% Similarity=0.165 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhh--
Q 014905 40 NSYIIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSC-- 116 (416)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-- 116 (416)
+.++....++.+++++....+ +.+ .+..-|+..++++..+..++.++.++++|.++||++|||+++.+-+...+..
T Consensus 13 r~lw~a~~iS~lG~~~~~va~-~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 13 RRLWIAQLISNLGDWMQTVAL-AWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 445566668999999998877 666 6788999999999999999999999999999999999999999855443322
Q ss_pred ---h-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 014905 117 ---V-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLL 189 (416)
Q Consensus 117 ---l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~ 189 (416)
+ ..-..+.+.+++.-++.|++.+...|+..+ ++.|. ++...++++.+..+++ .. ++||.+++.+
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A-~ip~lV~~~~L~~A~al~s~~~ni----ar----~iGPalgG~L 162 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQA-IIPELVPKEDLPAANALNSISFNI----AR----IIGPALGGIL 162 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccHhhHHHHHHHHHHHHHH----HH----hccchHHHHH
Confidence 2 122347899999999999999999999999 98877 3334443334333333 33 6667777777
Q ss_pred HhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCC-ccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 014905 190 VDTLALGPVAPFDAAACFLAFGMVIILASWTENYGD-PEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFL 268 (416)
Q Consensus 190 ~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
.... |-..+|.+.++..++.........++.+++ .++++..++.+++++.+.++|.+........++.........
T Consensus 163 va~~--G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~a- 239 (524)
T PF05977_consen 163 VAFF--GAAAAFLINALSFLISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWA- 239 (524)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHH-
Confidence 7665 778889888887777665554333332222 122333455677888888887766554444444333333222
Q ss_pred hhcccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 014905 269 WTPALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGG 345 (416)
Q Consensus 269 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (416)
.+|.+.++..+. ..|++.+..++|.++|+++.+++.+| .+.++.+..+....+.......+..
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~--~~~~~lv~~~~~~~a~~~~~lal~~------------ 305 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR--LSSRRLVLLASLLFALALLLLALSP------------ 305 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCcchhhHHHHHHHHHHHHHHhcch------------
Confidence 678887765444 38999999999999999999999988 6666766666665554444443333
Q ss_pred cccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeeeee
Q 014905 346 ISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLY 404 (416)
Q Consensus 346 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~~~ 404 (416)
+.+...+.+++.|++.........+.+++.+|++.|||++|+++...+....++..
T Consensus 306 ---~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsl 361 (524)
T PF05977_consen 306 ---SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSL 361 (524)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 56777778888888888888889999999999999999999998766665444433
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=1.5e-24 Score=202.66 Aligned_cols=320 Identities=13% Similarity=0.143 Sum_probs=204.0
Q ss_pred hhhHHHHHHHH---HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHH
Q 014905 37 SFMNSYIIVYS---LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITY 112 (416)
Q Consensus 37 ~~~~~~~~~~~---~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (416)
++++.++.+.. +...+.....|++ |.+ +++|.|++++|++.+.+.++..+++++.|+++||+|||+.+..+.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-p~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~ 81 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLV-PLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 44555544444 5666777888888 666 899999999999999999999999999999999999999999999988
Q ss_pred Hhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 014905 113 MLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL 188 (416)
Q Consensus 113 ~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 188 (416)
.++.. ...++|++.++++|+++|++.+...+...+ .+.+. ++|++..+. +..+..+|. .++|.+++.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~g~----~~g~~~~~~ 152 (381)
T PRK03633 82 AAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVES-ALMCSGTSRNRGRLLAA----YMMVYYLGT----VLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHH----HHHHHHHHH----HHHHHHHhc
Confidence 88888 778899999999999999999988877666 44433 566666333 334444445 556666665
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 014905 189 LVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFL 268 (416)
Q Consensus 189 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
+.+.. .++..+. ................+|++ ++++ .+++.++.+|+|+.+............... ...
T Consensus 153 l~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 221 (381)
T PRK03633 153 VSTEL--MSVLPWV-TGLVLAAILPLLFTRILNQQ--AENH-----DSTSIWPMLKLRQARLGVNGCIISGIVLGS-LYG 221 (381)
T ss_pred ccccc--cchHHHH-HHHHHHHHHHHHHhcccCCC--CCCC-----CCCCHHHHHHhcchHHHHHHHHHHHHHHHH-HHH
Confidence 54432 2232322 22222111112221222211 1111 112344566776655432222222222222 223
Q ss_pred hhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 014905 269 WTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGG 345 (416)
Q Consensus 269 ~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (416)
+.|.|.++. +.+ .+...+...++.++++...+++.|| .+.++.+..+.....+...... ..
T Consensus 222 ~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr--~~~~~~l~~~~~~~~~~~~~~~--~~----------- 285 (381)
T PRK03633 222 LMPLYLNHQ-GMSDASIGFWMALLVSAGILGQWPIGRLADR--FGRLLVLRVQVFVVILGSIAML--SQ----------- 285 (381)
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH--cCcHHHHHHHHHHHHHHHHHHh--hh-----------
Confidence 778887653 332 6777777788999999999999999 7777766555444443332221 11
Q ss_pred cccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 346 ISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 346 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
........+.++......|...+...|..|+++++...+..+...++.
T Consensus 286 -----~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG 333 (381)
T PRK03633 286 -----AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVG 333 (381)
T ss_pred -----HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 112234455555555677888888899999988777766655444443
No 56
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.94 E-value=5.7e-24 Score=199.71 Aligned_cols=300 Identities=16% Similarity=0.157 Sum_probs=191.9
Q ss_pred CChhhHHHHHH-----HHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH--------HHHHHHHHH
Q 014905 69 FGKGEIGQLFI-----AGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK--------ILMLGRIFG 134 (416)
Q Consensus 69 ~s~~~~g~i~~-----~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~--------~l~~~r~l~ 134 (416)
.++++.+.+.+ ...++..+++++.|+++||+|||+++..+.+...++.+ ..++++++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 45566665444 34455567899999999999999999999998888887 77777764 588899999
Q ss_pred Hhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHH----HHHhhhccCchhHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGN----LLVDTLALGPVAPFDAAACF 207 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~----~~~~~~~~~w~~~f~~~~~~ 207 (416)
|++.+...+...+ ++.|. ++|++..+.. ..+..+|..++..++..+.. ...+. ++||.+|.+.++.
T Consensus 107 G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~G~~i~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~ 179 (394)
T TIGR00883 107 GFSLGGEWGGAAL-YLAEYAPPGKRGFYGSFQ----QVGAPVGLLLAALTVLLLSYLLGDDALLE--WGWRIPFLVSAVL 179 (394)
T ss_pred HhhccccccccHH-HhhhcCCcccchHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCHHHhhc--cchHHHHHHHHHH
Confidence 9999998888888 88876 5666654444 34444444222233322221 11123 3899999887776
Q ss_pred HHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchh--HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---h
Q 014905 208 LAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDER--IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---H 282 (416)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (416)
.++...... ..||+++++++++.+++.+++.++.+++++ ++.......+.....+.... +.|.|.++..+.+ .
T Consensus 180 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~ 257 (394)
T TIGR00883 180 VLIGLYLRR-NLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITT-YLPTYLTQTLGLSANSA 257 (394)
T ss_pred HHHHHHHHH-hcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhHH
Confidence 665544333 445544322211112222334556666644 44444444444444444333 7888886654443 6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHH-HHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASL-LIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
+.......++..++.++.+++.|| .++|+.......+..... ......... + +.+.......+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~g 323 (394)
T TIGR00883 258 LLVLMLSLILFFITIPLSGALSDR--IGRRPVLIIFTVLAALLAVPLLMALLDS--G----------SFTLFFFLVLGLA 323 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hchHHHHHHHHHHHHHHHHHHHHHHhcC--C----------chHHHHHHHHHHH
Confidence 666777788899999999999999 777765554443333222 111111110 0 3344555666777
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeeee
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNFF 391 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~ 391 (416)
++.+...+...++++|.+|++.|++++|+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 353 (394)
T TIGR00883 324 LIGGMYTGPMGSFLPELFPTEVRYTGASLA 353 (394)
T ss_pred HHHHHHhhhHHHHHHHhCCccceeeEeeeh
Confidence 888888888999999999999999999984
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.94 E-value=2.2e-23 Score=195.68 Aligned_cols=267 Identities=14% Similarity=0.096 Sum_probs=189.2
Q ss_pred HHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchh
Q 014905 46 YSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSE 123 (416)
Q Consensus 46 ~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~ 123 (416)
......+.....+.+ |.+ +++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.....++.. ...+++
T Consensus 12 ~~~~~~~~~~~~~~l-p~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~ 90 (392)
T PRK10473 12 VLLYPAGIDMYLVGL-PRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET 90 (392)
T ss_pred HHHHHHHHHHHhhhH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 335556666777788 555 89999999999999999999999999999999999999999999888888888 777889
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhH
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAP 200 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~ 200 (416)
++.+++.|+++|++.+...+...+ ++.|. ++|++..+..+ ....+|. .++|.+++.+.+.. +|+..
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~----~~~~i~~----~~~~~i~~~l~~~~--g~~~~ 159 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFA-ILRDTLDDRRRAKVLSLLN----GITCIIP----VLAPVLGHLIMLKF--PWQSL 159 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHH-HHHHHcCHHHHHHHHHHHH----HHHHHHH----HHHHHHHHHHHhCc--ChHHH
Confidence 999999999999999988887777 77765 56666644332 2223334 66777777766665 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC
Q 014905 201 FDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 280 (416)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (416)
|++.++..++..++.....||++++++++ +++..+..++.+|+++.+.......+.......+.. +.|.+.++..+.
T Consensus 160 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~ 236 (392)
T PRK10473 160 FYTMAAMGILVLLLSLFILKETRPARAPA--ASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVN-TSPVLLMEQMGF 236 (392)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccCC--ccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHcCC
Confidence 99988877777666555566654332211 111223445667777766554443333333333233 566666655454
Q ss_pred c---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Q 014905 281 P---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIP 329 (416)
Q Consensus 281 ~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 329 (416)
+ .+.......++.+++.+..+++.|| .++|+....+...........
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r--~g~~~~~~~~~~~~~~~~~~~ 286 (392)
T PRK10473 237 SRGEYAIIMALTAGVSMTVSFSTPFALGI--FKPRTLMLTSQVLFLAAGITL 286 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHH
Confidence 3 5667777788899999999999999 777777666655554444333
No 58
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.93 E-value=9.7e-24 Score=204.39 Aligned_cols=325 Identities=16% Similarity=0.106 Sum_probs=202.8
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+..+......+.+ |.+ +++|.|+.+.+++.+...++..+++++.|+++||+|||+.+..+.+..+++.+ ..++++++
T Consensus 31 ~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 109 (496)
T PRK03893 31 LDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYW 109 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 4444555666666 445 89999999999999999999999999999999999999999999888888888 77888999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.|++.|++.+...+.... ++.|. ++|++..+.. ..+..+|. .++|.+.+.+.+.. +||+.|.
T Consensus 110 ~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~~~~~g~----~~~~~~~~~l~~~~--~w~~~f~ 178 (496)
T PRK03893 110 TLFIARLVIGMGMAGEYGSSAT-YVIESWPKHLRNKASGFL----ISGFSIGA----VVAAQVYSLVVPVW--GWRALFF 178 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHhccC--CHHHHHH
Confidence 9999999999999988888777 77766 5566663333 33334444 77777777777765 9999998
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcc-hhH------------------------H--------
Q 014905 203 AAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASD-ERI------------------------A-------- 249 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------------~-------- 249 (416)
+..+..++... .....||+++.+++++.+++.++..+...++ ++. +
T Consensus 179 ~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (496)
T PRK03893 179 IGILPIIFALW-LRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLL 257 (496)
T ss_pred HHHHHHHHHHH-HHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Confidence 75544433322 2223454332111100000000000000000 000 0
Q ss_pred --------------------HHHHHHHHHHH-HHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhh
Q 014905 250 --------------------LLGAIQSLFEG-SMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLA 305 (416)
Q Consensus 250 --------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~ 305 (416)
.......+... ..+. ...+.|.|.++..+.+ .+.+.+...++.+++.++.+++.|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~d 336 (496)
T PRK03893 258 CAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWP-IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGD 336 (496)
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccch-HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 0001 1236788886555553 678888889999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccc
Q 014905 306 HSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARS 385 (416)
Q Consensus 306 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg 385 (416)
| .+.++.+.....+..+.......... . +.+.......+.+.......+...++.+|.+|+++|+
T Consensus 337 r--~g~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 401 (496)
T PRK03893 337 W--LGTRKAYVCSLLISQLLIIPVFAIGG---------A----NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRA 401 (496)
T ss_pred H--hcchHHHHHHHHHHHHHHHHHhhccc---------c----HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhh
Confidence 9 77777665554443332222211111 0 2222222222223333334566677889999999999
Q ss_pred eeeeeeecccceeeee
Q 014905 386 TIMNFFRIPLNVFVCI 401 (416)
Q Consensus 386 ~~~g~~~~~~~~~~~~ 401 (416)
+++|+.+...++...+
T Consensus 402 ~~~~~~~~~~~~g~~l 417 (496)
T PRK03893 402 AGLGFTYNVGALGGAL 417 (496)
T ss_pred cccchhhhhhhHHHHH
Confidence 9999988777765444
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.93 E-value=1.6e-23 Score=199.22 Aligned_cols=312 Identities=12% Similarity=0.036 Sum_probs=197.1
Q ss_pred HHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc----hhHHHHHHHHHHHHh
Q 014905 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS----SEYKILMLGRIFGGI 136 (416)
Q Consensus 62 ~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~----~~~~~l~~~r~l~G~ 136 (416)
|.+++.|.|+++.|++.+++.++..+++++.|+++||+|||+.+..+.+..+++.+ .... ++++.+.+.|++.|+
T Consensus 51 p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 130 (438)
T TIGR00712 51 PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW 130 (438)
T ss_pred HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Confidence 55566799999999999999999999999999999999999999998887777766 4443 467788899999999
Q ss_pred hhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH-hhhccCchhHHHHHHHHHHHHH
Q 014905 137 ATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLV-DTLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 137 ~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-~~~~~~w~~~f~~~~~~~~~~~ 212 (416)
+.+...+.... .+.|. ++|++..+.. +.+..+|. .+++.+.+... +.. +||..|++.++..++..
T Consensus 131 ~~g~~~~~~~~-~i~~~~~~~~rg~~~~~~----~~~~~~g~----~~~~~l~~~~~~~~~--~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 131 FQGMGWPPCGR-TMVHWWSQSERGTIVSIW----NCAHNIGG----GIPPLLVLLGMAWFN--DWHAALYFPAICAIIVA 199 (438)
T ss_pred HhhcchHHHHH-HHHHhcCcccchhHHHHH----HHHHHhHh----HHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHH
Confidence 99888777777 76655 5677774444 33333334 44444444332 233 89999999888877766
Q ss_pred HHHHHhcccCCCCc---c-c---hh-------hHHH---hhhH-HHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 014905 213 VIILASWTENYGDP---E-K---KN-------LLAQ---FKGA-ALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALS 274 (416)
Q Consensus 213 ~~~~~~~~~~~~~~---~-~---~~-------~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (416)
+......||++++. + + ++ .+++ .++. .+..+|++.++.......+.....+.... |.|.|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l 278 (438)
T TIGR00712 200 LFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLD-WSPTYL 278 (438)
T ss_pred HHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHH-hHHHHH
Confidence 55555555543211 0 0 00 0000 0111 12356778887776655555555555444 889999
Q ss_pred cCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHH-HHHHHHhhccCCCCCCCCCCcccch
Q 014905 275 PNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSAS-LLIPILTNFLETPPDVRGGGISLSG 350 (416)
Q Consensus 275 ~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (416)
++..+.+ .+.......++.+++.++.+++.|| .+.++............ .......... .. +.
T Consensus 279 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~ 345 (438)
T TIGR00712 279 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK--VFKGNRGATGVFFMTLVTIAVIVYWMNP-------AG----NP 345 (438)
T ss_pred HHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcccHHHHHHHHHHHHHHHHHHhcC-------CC----ch
Confidence 8755543 6777777788899999999999999 53332222222111111 1111111110 00 22
Q ss_pred hHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 351 SLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
+.........++..............|.+|++.||++.|+.+...+..
T Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 393 (438)
T TIGR00712 346 LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG 393 (438)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhh
Confidence 222223333333222222222345779999999999999998776654
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=4.4e-23 Score=193.61 Aligned_cols=313 Identities=11% Similarity=0.081 Sum_probs=212.2
Q ss_pred HHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc---
Q 014905 46 YSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH--- 120 (416)
Q Consensus 46 ~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~--- 120 (416)
+++....+.+..|.+ |.+ +++|.|+.+.|++.+...++..+++++.|++.||+|||+++..+..+.+++.+ ...
T Consensus 12 f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~ 90 (410)
T TIGR00885 12 FALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE 90 (410)
T ss_pred HHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 335566777888888 555 89999999999999999999999999999999999999999999988888776 322
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH---------
Q 014905 121 SSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL--------- 188 (416)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~--------- 188 (416)
.++++.+++.|++.|++.+...+..+. ++.+. ++|++..+..+...+.|..+|. .+++.+...
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~----~i~~~l~~~~~~~~~~~~ 165 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGFLETAANP-YILVMGPESTATRRLNLAQSFNPFGSIIGM----VVAQQLILSNLPHQSQDV 165 (410)
T ss_pred hccHHHHHHHHHHHHhhHHHHHhhhhH-HHHHHCCHhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhcCCccchhhh
Confidence 358999999999999999999888787 66544 5566665555555555555554 443333111
Q ss_pred -------------HHhhhccCchhHHHHHHHHHHHHHHHHHHh-cccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHH
Q 014905 189 -------------LVDTLALGPVAPFDAAACFLAFGMVIILAS-WTENYGDPEKKNLLAQFKGAALAIASDERIALLGAI 254 (416)
Q Consensus 189 -------------~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (416)
..+.. +||.+|.+.+++.++..++..+. .||.++++ ++ +++.+++.++++|+|+++...+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~--~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~l~ 240 (410)
T TIGR00885 166 LDKLSPEELSAIKHSDLA--SVQTPYMIIGAVVLAVALLIMLTKMPALNHSD-AK--QISFSASLSRLARIRHYREGVIA 240 (410)
T ss_pred hhhcCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cc--cccchhhHHHHHhChhHHHHHHH
Confidence 01122 79999998888766655444322 33322111 11 11222345577888887776555
Q ss_pred HHHHHHHHHHHHHhhhcccccCCC-CCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 014905 255 QSLFEGSMYTFVFLWTPALSPNDE-EIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPI 330 (416)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 330 (416)
.+++........ .+.+.|.++.. +.+ .+...+....+..+|+++.+++.|| .+.+|.+.+......+...+..
T Consensus 241 ~f~yvg~e~~~~-s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r--~~~~~~l~i~~~~~~~~~ll~~ 317 (410)
T TIGR00885 241 QFFYVGVQIMCW-TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY--LAAHKVLMAYAIIGMALCLGSI 317 (410)
T ss_pred HHHHHHHHHHHH-HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHH
Confidence 555544433333 37777776532 222 2334445567778899999999999 7777766665555554444333
Q ss_pred HhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceee
Q 014905 331 LTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIM 388 (416)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~ 388 (416)
... + ......+.+.+++.+..+|..++...+..+++.+....
T Consensus 318 ~~~---------------~-~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~ 359 (410)
T TIGR00885 318 FAG---------------G-HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAA 359 (410)
T ss_pred HcC---------------C-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHH
Confidence 322 1 23567777888888888999999999999987654333
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=9.8e-24 Score=201.14 Aligned_cols=318 Identities=9% Similarity=0.045 Sum_probs=212.1
Q ss_pred HHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHH-HHHHH
Q 014905 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILML-GRIFG 134 (416)
Q Consensus 57 ~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~-~r~l~ 134 (416)
.++.+++.+++|.|+++.+++.+.+.+...++.++.|+++||+|||++++.+.+...++.+ +.++++++.+++ .|++.
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 118 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFIT 118 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3345333389999999999999999999999999999999999999999999888888888 778888888765 56899
Q ss_pred Hhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~ 212 (416)
|++.+...++..+ ++.+. ++|+++.++. ..+..+|. .++|.+++.+.+.. |||++|++.+++.++..
T Consensus 119 G~~~~~~~~~~~~-~~~~~~~~~r~~a~g~~----~~~~~~g~----~~~~~l~~~l~~~~--gwr~~f~~~~~~~~~~~ 187 (455)
T TIGR00892 119 GLGLAFNFQPSLT-MLGKYFYRRRPLANGLA----MAGSPVFL----STLAPLNQYLFESF--GWRGSFLILGGLLLHCC 187 (455)
T ss_pred HhcchhhhhHHHH-HHHHHHHhhHHHHHHHH----HhcccHHH----HHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHH
Confidence 9998876565555 66655 6677664433 33333444 66777777777776 99999999988777665
Q ss_pred HHHHHhcccCCC----Ccc--c----h-hhHH-------HhhhHH--HhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 014905 213 VIILASWTENYG----DPE--K----K-NLLA-------QFKGAA--LAIASDERIALLGAIQSLFEGSMYTFVFLWTPA 272 (416)
Q Consensus 213 ~~~~~~~~~~~~----~~~--~----~-~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (416)
+...+..++.+. +++ + + ..++ +..... .+.+++|.++.......+.....+.... +.|.
T Consensus 188 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~~ 266 (455)
T TIGR00892 188 VCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPII-FLVP 266 (455)
T ss_pred HHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHH-HHHH
Confidence 544433332110 000 0 0 0000 000011 1356777777665555555555444333 7777
Q ss_pred cccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHH-HHHHhhccCCCCCCCCCCccc
Q 014905 273 LSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLL-IPILTNFLETPPDVRGGGISL 348 (416)
Q Consensus 273 ~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 348 (416)
|.++ .+. ..+...+..+++.++++++.+++.||...+.++...+........+. +......
T Consensus 267 ~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-------------- 331 (455)
T TIGR00892 267 YAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG-------------- 331 (455)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 7665 344 36778888889999999999999997323333333332222211111 1111121
Q ss_pred chhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 349 SGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.+...+...+.+++.+...+...+.+.|.+|++++++++|+.+...++...+
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 384 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI 384 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc
Confidence 44556667778888888888889999999999999999999998877765444
No 62
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.93 E-value=2.3e-23 Score=193.84 Aligned_cols=316 Identities=14% Similarity=0.062 Sum_probs=211.0
Q ss_pred HHHHHHHH--HHHHHHH-hHHHHHHHHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh
Q 014905 40 NSYIIVYS--LMMAGDW-LQGPYVYYLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML 114 (416)
Q Consensus 40 ~~~~~~~~--~~~~~~~-~~~~~l~~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (416)
|.+...++ ...+..+ +..|.. +.+ + ++|+|++|.+++.++..++..+..++.|++.||+|.|+++.++.+...+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~-~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVT-VNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 45555444 3334444 444555 444 4 8999999999999999999999999999999999999999999888888
Q ss_pred hhh-hccc-----hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHH
Q 014905 115 SCV-TKHS-----SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLF 185 (416)
Q Consensus 115 ~~l-~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l 185 (416)
..+ ..++ ++++.+++.|++.|++ +..+++... .+++. ++||++.++.....+ .|..+...+.|.+
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~-~vs~wfp~~~rG~A~Gi~~g~G~----~G~~l~~~l~p~~ 186 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMG-NISFFFPKAKQGSALGINGGLGN----LGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHH-HHHHHCCHhHhHHHHHHHHHHHh----hHHHHHHHHHHHH
Confidence 777 6654 7999999999999998 667777777 77755 678888555533333 3444444666654
Q ss_pred HHH-HHhhh-----------ccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHH
Q 014905 186 GNL-LVDTL-----------ALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGA 253 (416)
Q Consensus 186 ~~~-~~~~~-----------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (416)
... +.+.+ ..+||.+.++..++.++..++.++..++.+++ ++ ..++..+.+|+|+.|.+++
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~--~~-----~~~~~~~vlk~~~~Wllsl 259 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS--RA-----SIADQLPVLQRLHLWLLSL 259 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc--cc-----CHHHHHHHhCCCchhHHHH
Confidence 421 21211 01477777777777777666666554443321 11 1234556889999999977
Q ss_pred HHHHHHHHHHHHHHhhhcccccCCCCCc-hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHh
Q 014905 254 IQSLFEGSMYTFVFLWTPALSPNDEEIP-HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILT 332 (416)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (416)
..++...++..+.. +.|.|.++..+.. .........+...+.+++.|+++|| .+.+|.+........+........
T Consensus 260 ly~~tFG~fvg~s~-~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADR--iG~~~vl~~~~i~~~i~~~~~~l~ 336 (462)
T PRK15034 260 LYLATFGSFIGFSA-GFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDK--FGGVRVTLINFIFMAIFSALLFLT 336 (462)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHh--cCchHHHHHHHHHHHHHHHHHHHH
Confidence 77666555555444 8888887754321 2222333466777889999999999 888888777776555443222222
Q ss_pred hccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCc
Q 014905 333 NFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPE 381 (416)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~ 381 (416)
... + ... +.+.....+....++.|+.+...+.++.+.+|+
T Consensus 337 lp~--~----~~~---~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 337 LPG--T----GSG---NFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred hcc--c----ccc---HHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 110 0 000 445556666666688888888888888888885
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.93 E-value=1.7e-23 Score=193.27 Aligned_cols=299 Identities=23% Similarity=0.301 Sum_probs=229.7
Q ss_pred HHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhH
Q 014905 47 SLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEY 124 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~ 124 (416)
+....+.....+.. |.+ +++|.++.+.+++.+...++..+++++.|+++||+|||+.+..+.....++.+ ....+++
T Consensus 9 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (352)
T cd06174 9 FLSGLDRGLLSPAL-PLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSL 87 (352)
T ss_pred HHHHHhhhhhHhhH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccH
Confidence 35556666777777 656 88999999999999999999999999999999999999999999998888888 7777899
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHH
Q 014905 125 KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPF 201 (416)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f 201 (416)
+.+++.|++.|++.+...+...+ ++.|. ++|++..+.. ..+..+|. .++|.+++.+.+.. +||..+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~g~----~~~~~~~~~~~~~~--~~~~~~ 156 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAA-LIAEWFPPKERGRALGLF----SAGFGLGA----LLGPLLGGLLAESL--GWRWLF 156 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHH-HHHHhCCccchhhhhhHH----HHHHHHHH----HHHHHHHHHHHHHh--hHHHHH
Confidence 99999999999999998888888 88877 4667664444 33333444 66677777777776 899999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC-
Q 014905 202 DAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI- 280 (416)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 280 (416)
.+.+...++..+...... |+.+.......+.......... +.|.+.++..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 209 (352)
T cd06174 157 LILAILGLLLALLLLFLL--------------------------RLLLLLALAFFLLSFGYYGLLT-YLPLYLQEVLGLS 209 (352)
T ss_pred HHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHhcCCC
Confidence 998888777766654222 4444454555555555555344 777777764333
Q ss_pred --chHHHHHHHHHHHHHhhHHHHHHhhcccccchh-HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHH
Q 014905 281 --PHGFIFATFMLASMLGSSFASRLLAHSSLRVES-YMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGF 357 (416)
Q Consensus 281 --~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (416)
+.+.......++..++.++.+++.|| .++|+ .+..+.....+......... +.+......
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~~~ 272 (352)
T cd06174 210 AAEAGLLLSLFGLGGILGALLGGLLSDR--LGRRRLLLLIGLLLAALGLLLLALAP---------------SLALLLVAL 272 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHH
Confidence 37788888899999999999999999 67666 66665555554444333322 446677788
Q ss_pred HHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 358 STFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 358 ~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+.+++.+...+...++.+|..|+++|++.+|+.+...++...+
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL 316 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999998877776544
No 64
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=3.6e-23 Score=194.45 Aligned_cols=323 Identities=14% Similarity=0.075 Sum_probs=204.0
Q ss_pred HHHHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-h---
Q 014905 45 VYSLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-T--- 118 (416)
Q Consensus 45 ~~~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~--- 118 (416)
..++...+.....|++ |.| +++|.|+.++|++.+...+...+++++.|+++||+|||+.++.+....++... .
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 88 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFF-PIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIY 88 (396)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3446666777888988 666 57999999999999999999999999999999999999999887555544332 1
Q ss_pred ccc-----hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 014905 119 KHS-----SEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT 192 (416)
Q Consensus 119 ~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~ 192 (416)
... +......+.+++.|++.+...+...+ +..|. ++++...+.. .....+|. .++|.+++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~----~~~~~~g~----~~g~~~~g~l~~~ 159 (396)
T TIGR00882 89 VFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA-YIEKVSRNSNFEYGKA----RMFGCVGW----ALCASIAGILFSI 159 (396)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHhhhhcccccchh----hhhcccHH----HHHHHHHhhhhcc
Confidence 111 12344566788889888888887777 66654 3333332222 22223444 6777777766543
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccch-----hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKK-----NLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVF 267 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (416)
+|+.+|++.+.+.++..++.+...||++++++++ +.+++..++.++.+|||+++..................
T Consensus 160 ---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 236 (396)
T TIGR00882 160 ---DPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQ 236 (396)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877776665553444433221111 01111234567888898876654444433333222222
Q ss_pred hhhcccccCCC---CC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014905 268 LWTPALSPNDE---EI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDV 341 (416)
Q Consensus 268 ~~~~~~~~~~~---~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (416)
+.|.|.++.. +. ..|...+...+...++....+++.|| .++|+.+.++..+..+....... ..
T Consensus 237 -~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r--~g~~~~l~~~~~l~~l~~~~~~~-~~------- 305 (396)
T TIGR00882 237 -QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR--IGAKNALLIAGTIMSVRIIGSSF-AT------- 305 (396)
T ss_pred -HHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccchhHHHHHHHHHHHHHHHHh-cC-------
Confidence 4455543321 11 25777777788888889999999999 78777776666555543333222 21
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeee-eeccccee
Q 014905 342 RGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRIPLNVF 398 (416)
Q Consensus 342 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~-~~~~~~~~ 398 (416)
+.+.......+.+++..........+..+..|++.+++..+. ++...++.
T Consensus 306 -------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg 356 (396)
T TIGR00882 306 -------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLA 356 (396)
T ss_pred -------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHH
Confidence 345455555666666555545555667777888888887766 44444443
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=1.6e-23 Score=193.96 Aligned_cols=308 Identities=12% Similarity=0.094 Sum_probs=201.0
Q ss_pred HhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 54 ~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
....|.++++.+++|.|+++.|++.+.+.++..+++++.|+++||+||||++.++.+...++.+ . ..++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 3456777343489999999999999999999999999999999999999999999888777777 5 6788999999999
Q ss_pred HHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
+.|++.+...+.... ++.|. ++|++..+. .+.+..+|. .+++.+++.+.+..+.+||..|...++..++
T Consensus 96 ~~g~g~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~g~----~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 96 LIGVGIAIINVLLPS-LIKRDFPQRVGLMTGL----YSMALMGGA----ALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHhccchH-HHHHhCcchhhHHHHH----HHHHHHHHH----HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999987776666 66655 556666433 344444445 4444555554444312499888776655443
Q ss_pred HHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHH
Q 014905 211 GMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFA 287 (416)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~ 287 (416)
.... ..||.+++++++ ++..+...++.+|+|..+.......+.....+.... |.|.|.++. +.+ .+...+
T Consensus 167 ~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lp~~~~~~-g~~~~~~g~~~~ 239 (355)
T TIGR00896 167 ALLA---WIPQVRRRVAAN--QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIG-WLPAILISH-GASAATAGSLLA 239 (355)
T ss_pred HHHH---HhhhhccccCCC--CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHc-CCCHHHHHHHHH
Confidence 3222 223222111111 111112345677888777665554444444454333 888888753 443 677888
Q ss_pred HHHHHHHHhhHHHHHHhhcccccchh-HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014905 288 TFMLASMLGSSFASRLLAHSSLRVES-YMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI 366 (416)
Q Consensus 288 ~~~~~~~~~~~~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 366 (416)
...++.+++++..+++.|| .+.+| .......+..+.......... .. ......+.+++.+.
T Consensus 240 ~~~~~~i~~~~~~g~l~dr--~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~~~l~g~~~g~ 301 (355)
T TIGR00896 240 LMQLAQAASALLIPALARR--VKDQRGIVAVLAVLQLVGLCGLLFAPM---------------HG-LWAWALVLGLGQGG 301 (355)
T ss_pred HHHHHHHHHHHhHHHHHhh--hccchHHHHHHHHHHHHHHHHHHHhhh---------------hH-HHHHHHHHHHhhhh
Confidence 8899999999999999999 64444 333433333333332222221 11 12245667888888
Q ss_pred chhHHHHHHhccC-Cccccceeeeeeecccc
Q 014905 367 FWPSIMKMRSQYI-PEEARSTIMNFFRIPLN 396 (416)
Q Consensus 367 ~~~~~~~~~~~~~-p~~~rg~~~g~~~~~~~ 396 (416)
..|...+...+.. +++++++.+++.+...+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 332 (355)
T TIGR00896 302 AFPLALTLIGLRSRQAAQAAALSAMAQSIGY 332 (355)
T ss_pred HhHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 8888777665544 45667888777654443
No 66
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=9.6e-24 Score=204.80 Aligned_cols=305 Identities=11% Similarity=0.003 Sum_probs=208.6
Q ss_pred HHcCCC---hhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhh
Q 014905 65 STYGFG---KGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSL 140 (416)
Q Consensus 65 ~~~~~s---~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~ 140 (416)
+|++++ +.+.+++.+++.++..+++++.|+++||+|||++++++.+...++.+ ..++++++.+++.|++.|++.+.
T Consensus 117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~ 196 (505)
T TIGR00898 117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGG 196 (505)
T ss_pred EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccc
Confidence 789998 89999999999999999999999999999999999999988888888 88899999999999999999999
Q ss_pred hhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 014905 141 LFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILA 217 (416)
Q Consensus 141 ~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~ 217 (416)
..+...+ ++.|. ++|+...+ ....+..+|. ++++.++..+. +||+.+++.++..++..+.. +
T Consensus 197 ~~~~~~~-~~~e~~~~~~r~~~~~----~~~~~~~~g~----~~~~~~~~~~~-----~wr~~~~~~~i~~~~~~~~~-~ 261 (505)
T TIGR00898 197 IWVQAVV-LNTEFLPKKQRAIVGT----LIQVFFSLGL----VLLPLVAYFIP-----DWRWLQLAVSLPTFLFFLLS-W 261 (505)
T ss_pred hHHHHHH-HhheecChhhhHHHHH----HHHHHHHHHH----HHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHH-H
Confidence 9988888 88877 55666533 3334444444 56666655443 69999999888777766655 4
Q ss_pred hcccCCCCc----cchhh------------------------HHH-----hhhHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 014905 218 SWTENYGDP----EKKNL------------------------LAQ-----FKGAALAIASDERIALLGAIQSLFEGSMYT 264 (416)
Q Consensus 218 ~~~~~~~~~----~~~~~------------------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (416)
..||+++.. +.++. +++ .+.+.++++++|+.+...+...........
T Consensus 262 ~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (505)
T TIGR00898 262 FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAF 341 (505)
T ss_pred hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 677765310 00000 000 012456677777766554443333222221
Q ss_pred HHHhhhcccccCCCCCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 014905 265 FVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGG 344 (416)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (416)
.....+.+. ...+.+........++..+++.++.+++.|| .++|+.+.....+.++.+........ .
T Consensus 342 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr--~grr~~~~~~~~~~~~~~l~~~~~~~---------~ 408 (505)
T TIGR00898 342 -SYYGLVLDL-GNLGGNIYLDLFISGLVELPAKLITLLLIDR--LGRRYTMAASLLLAGVALLLLLFVPV---------D 408 (505)
T ss_pred -HHHHHhccc-cccCCChHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHcCC---------C
Confidence 221222222 2233344444455577788889999999999 77777776666655555444433331 0
Q ss_pred CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 345 GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.+.......+.+++.+..++..+.+.+|.+|++.|++++|+.+....++..+
T Consensus 409 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i 461 (505)
T TIGR00898 409 ----LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII 461 (505)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHH
Confidence 12334445555666677778888999999999999999999988766665443
No 67
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=5e-23 Score=194.92 Aligned_cols=323 Identities=14% Similarity=0.076 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc-
Q 014905 44 IVYSLMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK- 119 (416)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~- 119 (416)
..+++...+.....|++ +.| +++|+|+.++|++.+...++..+++++.|+++||+|||++++++....++... ..
T Consensus 17 ~~~~~~~~~~~~~~~~~-~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 95 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFF-PIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFI 95 (420)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 33445566667788898 767 56999999999999999999999999999999999999999886554443322 11
Q ss_pred --cch-----hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 014905 120 --HSS-----EYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD 191 (416)
Q Consensus 120 --~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 191 (416)
.++ ......++++..|.+.....+.... +..+. ++++...+.. .....+|. .++|.+++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~----~~~~~~g~----~i~~~~~g~l~~ 166 (420)
T PRK09528 96 YVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEA-YIERVSRRSGFEYGRA----RMWGSLGW----ALCAFIAGILFN 166 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhh-HHHHHHhhccccchhh----HHhhhHHH----HHHHHHHHHHHh
Confidence 111 1111223344444433333333344 33322 4444442222 22223344 667777777765
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc--chh---hHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 014905 192 TLALGPVAPFDAAACFLAFGMVIILASWTENYGDPE--KKN---LLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFV 266 (416)
Q Consensus 192 ~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (416)
. +|+.+|++.++..++..+..+...+|++++++ +++ .++...++.++.+|||+++...+.............
T Consensus 167 ~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~ 243 (420)
T PRK09528 167 I---NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFD 243 (420)
T ss_pred c---CchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHH
Confidence 4 89999998887777666665544444332211 000 011112344567778776554433333222222212
Q ss_pred HhhhcccccCC---CCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014905 267 FLWTPALSPND---EEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPD 340 (416)
Q Consensus 267 ~~~~~~~~~~~---~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (416)
. +.|.|..+. .+. ..|.+.+...+...++.+..+++.|| .+.++.+..+..+..+......+..
T Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr--~g~~~~~~~~~~l~~~~~~l~~~~~------- 313 (420)
T PRK09528 244 Q-QFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR--IGAKNALLLAGTIMAVRIIGSGFAT------- 313 (420)
T ss_pred H-HHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcchhhHHHHHHHHHHHHHHHhcc-------
Confidence 2 344444321 122 25777787888888999999999999 7877776666665554444333222
Q ss_pred CCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeee-eecccce
Q 014905 341 VRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRIPLNV 397 (416)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~-~~~~~~~ 397 (416)
+.+.......+.++..+...+....+++|.+|++.|++..+. ++...++
T Consensus 314 --------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l 363 (420)
T PRK09528 314 --------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL 363 (420)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH
Confidence 445555556666666666667777888999999999988766 4443333
No 68
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=9.2e-23 Score=196.72 Aligned_cols=308 Identities=12% Similarity=0.103 Sum_probs=188.4
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc------------hhHHHHHHHHHH
Q 014905 67 YGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS------------SEYKILMLGRIF 133 (416)
Q Consensus 67 ~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~------------~~~~~l~~~r~l 133 (416)
++.++++.+++.+.+.++..++++++|+++||+|||+++.++.....++.+ .++. ++++.+++.|++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 388999999999999999999999999999999999999999888777766 4431 235678899999
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH--------hhhccCchhHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLV--------DTLALGPVAPFD 202 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~--------~~~~~~w~~~f~ 202 (416)
+|++.+...+...+ +++|. ++|++..+.. +.+..+|. .+++.++..+. +. ++||++|+
T Consensus 130 ~G~~~g~~~~~~~~-~i~e~~~~~~rg~~~~~~----~~~~~~G~----~~~~~~~~~~~~~~~~~~~~~--~gWr~~f~ 198 (479)
T PRK10077 130 GGIGVGLASMLSPM-YIAEIAPAHIRGKLVSFN----QFAIIFGQ----LVVYFVNYFIARSGDASWLNT--DGWRYMFA 198 (479)
T ss_pred HhhhHhHHhhHHHH-HHHhhCChhhhhHHHHHH----HHHHHHHH----HHHHHHHHHHhccCccccccc--CChHHHHH
Confidence 99999999999999 99887 6688875444 33344444 33333332221 22 38999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCc----cchhhH------------HHhhhHHHhhhc-----chhHHHH---HH----H
Q 014905 203 AAACFLAFGMVIILASWTENYGDP----EKKNLL------------AQFKGAALAIAS-----DERIALL---GA----I 254 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------------~~~~~~~~~~~~-----~~~~~~~---~~----~ 254 (416)
+.++..++..+.. .+.||+++.. ++++.+ ++..++.++..+ .++.+.. .. .
T Consensus 199 ~~~~~~~~~~~~~-~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (479)
T PRK10077 199 SEAIPALLFLMLL-YFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVM 277 (479)
T ss_pred HHHHHHHHHHHHH-HcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHH
Confidence 8887777765544 3677766421 111000 000011111111 1111111 00 0
Q ss_pred HH-HHHHHHHHHHHhhhcccccCCCCC--c-hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 014905 255 QS-LFEGSMYTFVFLWTPALSPNDEEI--P-HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPI 330 (416)
Q Consensus 255 ~~-~~~~~~~~~~~~~~~~~~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 330 (416)
.. +.+...+.....+.|.+.++ .+. . ........++..+++.++.+++.|| .+.|+.+..+..+..+......
T Consensus 278 ~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr--~g~r~~~i~~~~~~~v~~~~l~ 354 (479)
T PRK10077 278 LSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDK--FGRKPLQIIGALGMAIGMFSLG 354 (479)
T ss_pred HHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--hcChHHHHHhHHHHHHHHHHHH
Confidence 01 11111111122255665443 222 2 3444455677888999999999999 7777777666665554444333
Q ss_pred HhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc-chhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 331 LTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
...... . .........++++.+.+. ..|..+.+++|.+|+++|++++|+.+...++...
T Consensus 355 ~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~ 414 (479)
T PRK10077 355 TAFYTQ------A-----PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANY 414 (479)
T ss_pred HHHhcC------c-----ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHH
Confidence 222100 0 112223334444444443 3477889999999999999999987765555443
No 69
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=3.2e-23 Score=198.95 Aligned_cols=310 Identities=12% Similarity=-0.009 Sum_probs=208.3
Q ss_pred HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc--chhHHHHHHHHHHHHhhhhhhh
Q 014905 66 TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH--SSEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 66 ~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~--~~~~~~l~~~r~l~G~~~~~~~ 142 (416)
++++++.+.|++.+.+.+++.+++++.|+++||+|||+.+..+.+...++.+ ... ..+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 7899999999999999999999999999999999999999999888777766 433 3467889999999999999999
Q ss_pred hhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-hccCchhHHHHHHHHHHHHHHHHHHh
Q 014905 143 SAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT-LALGPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 143 ~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~-~~~~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
+.... +++|. ++|++..+ ....+..+|. .+++.+.+.+.+. . +||.+|++.++..++..++.+..
T Consensus 150 ~~~~~-~~~~~~~~~~r~~~~~----~~~~~~~~g~----~i~~~l~~~l~~~~~--gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 150 PATHK-IIVKWAPPKERSRLLG----MSTSGFQLGT----FIFLPISGWLCESWG--GWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred hhHHH-HHHhcCCHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHHhccC--CCCeehhhhhHHHHHHHHHHHHH
Confidence 98888 88877 56666633 3344444445 6677777777665 4 89999999988877776666655
Q ss_pred cccCCCCccc--hhhHH-------------HhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc--
Q 014905 219 WTENYGDPEK--KNLLA-------------QFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-- 281 (416)
Q Consensus 219 ~~~~~~~~~~--~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (416)
.+|+|+++++ +++++ +.+.+++++++++.++...+..+......+.+.. |.|.|+++..+.+
T Consensus 219 ~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~ 297 (465)
T TIGR00894 219 PADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPT-YLPTFISWVLRVSGK 297 (465)
T ss_pred hcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcChH
Confidence 5555432211 11010 0112467788888888887777777777776555 9999998755553
Q ss_pred -hHHHHHHHHHHHHHhhHHHHHHhhccccc---chhH---HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHH
Q 014905 282 -HGFIFATFMLASMLGSSFASRLLAHSSLR---VESY---MQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQL 354 (416)
Q Consensus 282 -~g~~~~~~~~~~~~~~~~~~~l~~r~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (416)
.+...+...++..++..+.|++.||...+ .++. +.................... . +.+...
T Consensus 298 ~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~ 365 (465)
T TIGR00894 298 ENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLS--A----------AFYLTI 365 (465)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcC--C----------chHHHH
Confidence 67777788888899999999999974111 1111 111111111111111111100 0 223334
Q ss_pred HHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 355 IGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 355 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
..+.+.+.+.+...+.......|..|+ .+|.+.|+.+...++...
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHH
Confidence 444555555555555555556676665 899999998887776533
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=2.4e-22 Score=212.99 Aligned_cols=345 Identities=15% Similarity=0.077 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHH--HH---HHcCCCh-hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHH---HHHH
Q 014905 42 YIIVYSLMMAGDWLQGPYVYY--LY---STYGFGK-GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTY---CITY 112 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~--l~---~~~~~s~-~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~---~~~~ 112 (416)
++...++..+++++....+.. .+ ++.+.+. ...++..+++.++..++++++|+++||+|||+++... .+..
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 444444666666544322211 12 2333322 4578889999999999999999999999999986442 2222
Q ss_pred Hhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 014905 113 MLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL 188 (416)
Q Consensus 113 ~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 188 (416)
....+ ....+++++++++|+++|++.+...+...+ ++.+. ++|++++++.+...+ +|. +++|.+++.
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a-~l~~~~~~~~~~~a~~~~~~~~~----ig~----~igp~l~g~ 166 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS-ILPDHLNKDELLGANALVEAGTF----IAI----LLGTIIGGL 166 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH-hhHhhcCccccchhhHHHHHHHH----HHH----HHHHHHHHH
Confidence 22222 334579999999999999999999998888 88866 667777555543333 334 666677787
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccc----hhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 014905 189 LVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEK----KNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYT 264 (416)
Q Consensus 189 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (416)
+.+.. +|+..|....+..++..++.. ..++.+.+++. .+..++....++.+.++|.++...+...+.......
T Consensus 167 l~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (1140)
T PRK06814 167 ATISG--NFVILVALLMGIAVLGWLASL-FIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAV 243 (1140)
T ss_pred HHhcc--ccHHHHHHHHHHHHHHHHHHh-hCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 77766 999988554444444443333 44444322111 111223345678888888888887766666655555
Q ss_pred HHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhcc-CCCCC
Q 014905 265 FVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFL-ETPPD 340 (416)
Q Consensus 265 ~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 340 (416)
... +.|.|.++..+.+ .|.+.+...++.+++.+..+++.|| ...++.+..+.++..+....+...... .....
T Consensus 244 ~~~-~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (1140)
T PRK06814 244 VLS-QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG--RITLLYVPIGALLMGLFGLDLAFASSSVPAEPA 320 (1140)
T ss_pred HHH-HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC--ceeeeeehHHHHHHHHHHHHHHhcccccccccc
Confidence 444 8899988765543 7888888899999999999999987 444444433333333222222221000 00000
Q ss_pred CCCC----CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 341 VRGG----GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 341 ~~~~----~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.... ....+.+...+..++++++.+...+...+++++.+|++.||+++|+.++..+++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~i 385 (1140)
T PRK06814 321 QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVA 385 (1140)
T ss_pred cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHH
Confidence 0000 000044666677778888888888889999999999999999999998776664433
No 71
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.91 E-value=1.4e-22 Score=193.07 Aligned_cols=329 Identities=13% Similarity=0.092 Sum_probs=214.2
Q ss_pred HHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh----hCchH-HHHHHHHHHHhhhh-hccch
Q 014905 50 MAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK----QGRKR-ACVTYCITYMLSCV-TKHSS 122 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr----~Grr~-~l~~~~~~~~~~~l-~~~~~ 122 (416)
.....+..+++.+.+ +++|+|+.++|++.++..+...+.+|+.|+++|| +|||| .++.+....+++.+ +...+
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~ 91 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence 344556667774555 6899999999999999999999999999999997 67755 45566666666555 44433
Q ss_pred h------HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH--
Q 014905 123 E------YKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLV-- 190 (416)
Q Consensus 123 ~------~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~-- 190 (416)
+ .+.+++.+++.+++.+....+..+ +..|. ++|++..++. ..+..+|..++..+.+.+.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~R~~~~~~~----~~~~~~g~~l~~~~~~~l~~~~~~~ 166 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWS-LVPAITLDPRERESLSTFR----RFGATLGGLLVAVIVLPLVSYFGGG 166 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhh-CcccccCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 466777788888888876666666 65543 5666654333 33333444232233322222221
Q ss_pred -hhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccc-hhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 014905 191 -DTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEK-KNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFL 268 (416)
Q Consensus 191 -~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
+. .+||..+.+.+++..+..+......||+++++++ ++.+.+.++.++++++||+++.......+.....+....
T Consensus 167 ~~~--~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (437)
T TIGR00792 167 DDK--FGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNG- 243 (437)
T ss_pred ccc--ccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcc-
Confidence 12 3899999998888877777666566665432111 111223445677888999888776666655555554333
Q ss_pred hhcccccCCCCC--chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCc
Q 014905 269 WTPALSPNDEEI--PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGI 346 (416)
Q Consensus 269 ~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (416)
+.+.|.++..+. ..+.......++.+++.++.+++.|| .++++....+..+..+..........
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r--~g~~~~~~~~~~~~~~~~~~~~~~~~------------ 309 (437)
T TIGR00792 244 VQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKK--FGRKILFAGGILLMVLGYLIFFFAGS------------ 309 (437)
T ss_pred hhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHcch------------
Confidence 556666554332 25556666688899999999999999 77777776665555444333322221
Q ss_pred ccchhHHHHHHHHHHHhhhcchhHHHHHHhccCC-------ccccceeeeeeecccceeeeee
Q 014905 347 SLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIP-------EEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 347 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-------~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+.+...+...+.+++.+...+..+++.+|..| ++.+|+.+|+.+...++...++
T Consensus 310 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 310 --NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 33455566677788888888888999888876 4567888888877666654443
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=4.1e-22 Score=187.81 Aligned_cols=324 Identities=12% Similarity=0.010 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCc-hHHHHHHHHHHHhhhh-h
Q 014905 42 YIIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGR-KRACVTYCITYMLSCV-T 118 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~l-~ 118 (416)
+-..+++...+..+..|++.+.+ +++|+|.+|+|++.++..++..++++++|+++||+|| |+++.++.+...+... .
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 34445566667778888884444 6799999999999999999999999999999999965 7788877777766666 6
Q ss_pred ccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-----------cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 014905 119 KHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-----------NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGN 187 (416)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-----------~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~ 187 (416)
.+.++++.+++.|++.|++.+...+...+ ...+. .+|.+. . | .+|. .++|.+++
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-l~~~~~~~~g~~~~~~~~~~r~---~------G-~lG~----~ig~~l~g 151 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNS-ISYANLPQAGLDVVTDFPPIRV---M------G-TIGF----IAAMWAVS 151 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHH-HHHHHHhhcCCCchhcCCCeee---e------h-hHHH----HHHHHHHH
Confidence 67788999999999999987777666655 33211 122221 1 1 1334 66666666
Q ss_pred HHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccch--hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 014905 188 LLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKK--NLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTF 265 (416)
Q Consensus 188 ~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (416)
.+.... .|+ +|++.++..++..++.. ..||++++++++ +.++..+.+.++.+|+|+++......++.......
T Consensus 152 ~l~~~~--~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~- 226 (418)
T TIGR00889 152 LLDIEL--SNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQI- 226 (418)
T ss_pred Hhcccc--hhH-HHHHHHHHHHHHHHHHh-cCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHH-
Confidence 552221 343 56666666665555433 566654322211 11121222345678888876665555544433322
Q ss_pred HHhhhcccccCCC-C---------CchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 014905 266 VFLWTPALSPNDE-E---------IPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFL 335 (416)
Q Consensus 266 ~~~~~~~~~~~~~-~---------~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (416)
...+.|.+.++.. + ...+...+...++.+++.+..+++.|| ++.|+.+..+.....+..........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr--~g~r~~l~~~~~~~~v~~~l~~~~~~- 303 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR--FGIKKVMLLSLVAWALRFGFFAYGDP- 303 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHcCc-
Confidence 2225566654421 1 125778888888999999999999999 78888777766665544433333111
Q ss_pred CCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeee-ccccee
Q 014905 336 ETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IPLNVF 398 (416)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~-~~~~~~ 398 (416)
. .. +.+..++..++.+++.+...+....++.|.+|++.|++++|+.+ ...++.
T Consensus 304 ~-------~~---~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg 357 (418)
T TIGR00889 304 E-------YF---GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFG 357 (418)
T ss_pred c-------hh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH
Confidence 0 00 12334456677778888888888899999999999999999986 334443
No 73
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.91 E-value=6e-22 Score=191.62 Aligned_cols=312 Identities=13% Similarity=-0.010 Sum_probs=189.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchh------HHHHHHHHHHHHhhhhh
Q 014905 68 GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSE------YKILMLGRIFGGIATSL 140 (416)
Q Consensus 68 ~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~------~~~l~~~r~l~G~~~~~ 140 (416)
+.++.+.+++.+...++..+++++.|+++||+|||+++.++.+...++.+ ..++++ ++.++++|++.|++.+.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 35567789999999999999999999999999999999999888887776 555554 78999999999999999
Q ss_pred hhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-----------------hhccCchhH
Q 014905 141 LFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD-----------------TLALGPVAP 200 (416)
Q Consensus 141 ~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-----------------~~~~~w~~~ 200 (416)
..+.... +++|. ++|++..+..+.....|..+|. .++..+.....+ ..+++||++
T Consensus 132 ~~~~~~~-~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~ 206 (502)
T TIGR00887 132 DYPLSAI-ITSEFATKKWRGAMMAAVFAMQGFGILAGA----IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRIL 206 (502)
T ss_pred hhHHHHH-HHHHhcChhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhccccccccccccccccccchhcccHHHH
Confidence 9998888 99988 7788876655555555544444 333322211110 112489999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCC-----ccchhhH---------------H----------HhhhHHHhhhcc---hh
Q 014905 201 FDAAACFLAFGMVIILASWTENYGD-----PEKKNLL---------------A----------QFKGAALAIASD---ER 247 (416)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------------~----------~~~~~~~~~~~~---~~ 247 (416)
+.+.++..++..+.. +..||+|+. +++++.+ + +.+.++++++++ ++
T Consensus 207 ~~~~~ip~~i~~~~~-~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (502)
T TIGR00887 207 IGFGAVPALLALYFR-LTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWR 285 (502)
T ss_pred HHHHHHHHHHHHHHH-HhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhH
Confidence 988777766655554 367887651 1100000 0 011235555542 22
Q ss_pred HHHHHH----HHHHHHHHHHHHHHhhhcccccCCCCCc---hH-----------H-HHHHHHHHHHHhhHHHHHHhhccc
Q 014905 248 IALLGA----IQSLFEGSMYTFVFLWTPALSPNDEEIP---HG-----------F-IFATFMLASMLGSSFASRLLAHSS 308 (416)
Q Consensus 248 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g-----------~-~~~~~~~~~~~~~~~~~~l~~r~~ 308 (416)
.....+ ..+......|.. ..|.|.+.++. +.+ .+ . ......++.+++.++.+++.||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~y~~-~~~~p~i~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-- 361 (502)
T TIGR00887 286 HGKHLLGTAGSWFLLDIAFYGV-NLNQKVILSAI-GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-- 361 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-ccccHHHHHHH-cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Confidence 211111 111122333332 22566666432 221 11 0 1222345667788899999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhh-cchhHHHHHHhccCCcccccee
Q 014905 309 LRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVG-IFWPSIMKMRSQYIPEEARSTI 387 (416)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~p~~~rg~~ 387 (416)
.++|+.+..+..+..+.+.......... +.........+..+..+ ...+..+.+.+|.+|++.|+++
T Consensus 362 ~gRR~~l~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~ 429 (502)
T TIGR00887 362 IGRKPIQLMGFFILTVLFFVLGFAYNHL------------STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTA 429 (502)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHhc------------chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHH
Confidence 7777766665555554443333222100 00111122222222222 2456777888999999999999
Q ss_pred eeeeecccceeeee
Q 014905 388 MNFFRIPLNVFVCI 401 (416)
Q Consensus 388 ~g~~~~~~~~~~~~ 401 (416)
.|+.+...++...+
T Consensus 430 ~g~~~~~~~~~~~~ 443 (502)
T TIGR00887 430 HGISAASGKAGAII 443 (502)
T ss_pred HHHHHHHhhhHHHH
Confidence 99988777665544
No 74
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.90 E-value=1.5e-22 Score=195.02 Aligned_cols=313 Identities=14% Similarity=0.121 Sum_probs=188.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc---chhHHHHHHHHHHHHhhhhhhhhh
Q 014905 69 FGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH---SSEYKILMLGRIFGGIATSLLFSA 144 (416)
Q Consensus 69 ~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~---~~~~~~l~~~r~l~G~~~~~~~~~ 144 (416)
.+..+.+++.+++.++..++++++|+++||+|||++++.+.++..++.+ ... ..+++.+++.|++.|++.+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 3389999999999999999999999999999999999999888888776 533 345668999999999999999888
Q ss_pred hhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHH---HHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 014905 145 FESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFG---NLLVDTLALGPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 145 ~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~---~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
..+ ++.|. ++|++..++. ..+..+|. .+++.++ ....+.. +||+.|++.++..++..+... +
T Consensus 148 ~~~-~i~~~~~~~~r~~~~~~~----~~~~~~G~----~~~~~~~~~~~~~~~~~--~w~~~f~~~~~~~~~~~~~~~-~ 215 (481)
T TIGR00879 148 VPM-YLSEIAPKALRGALTSLY----QLAITFGI----LVAYGFGSGKVSLNNTL--GWRIPLGLQLIPAGLLFLGLF-F 215 (481)
T ss_pred HHH-HHHccCChhhhhhhhhHH----HHHHHHHH----HHHHHHHHHhhcCCCCc--cHHHHHHHHHHHHHHHHHHHh-c
Confidence 888 88876 6677774444 33333444 4444554 3322333 899999996665555544443 5
Q ss_pred cccCCCC----ccchhhHHH--------------hh-----------------hHHHhhhcc-----hhHHHHHHHHHHH
Q 014905 219 WTENYGD----PEKKNLLAQ--------------FK-----------------GAALAIASD-----ERIALLGAIQSLF 258 (416)
Q Consensus 219 ~~~~~~~----~~~~~~~~~--------------~~-----------------~~~~~~~~~-----~~~~~~~~~~~~~ 258 (416)
.||+++. +++++.++. .+ ...++.++. ++.........+.
T Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (481)
T TIGR00879 216 LPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQ 295 (481)
T ss_pred CCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHH
Confidence 5654321 000000000 00 000112221 1222222222222
Q ss_pred HHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 014905 259 EGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFL 335 (416)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (416)
..........+.|.+.++ .+.+ .+.......++.+++.++.+++.|| .++|+....+..+..+...........
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (481)
T TIGR00879 296 QFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR--FGRRPLLLIGAAGMAICLFVLGILGAS 372 (481)
T ss_pred HHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222112223255655543 2332 4666677788889999999999999 777777666655544443333321110
Q ss_pred CCCCCCCCCCcccchhHHHHHHHHHHHhhhc-chhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 336 ETPPDVRGGGISLSGSLQLIGFSTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
..+ +.+ .. ..+.......+...+.+. ..+....+..|.+|++.|++++|+.+...++...+
T Consensus 373 ~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i 434 (481)
T TIGR00879 373 FVT-GSS-KS---SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434 (481)
T ss_pred ccC-Ccc-cc---hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 00 012233333344444443 44666777899999999999999998877776544
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=8.8e-22 Score=209.31 Aligned_cols=324 Identities=15% Similarity=0.034 Sum_probs=211.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCCh--hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----hcc
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGK--GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----TKH 120 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~--~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~~~ 120 (416)
+..+++......+.+.. ++++.+. ...+++.+++.++..++++++|+++||+|||++++.+.++..+..+ ...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~ 99 (1146)
T PRK08633 20 LNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY 99 (1146)
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455543332332333 5566654 4469999999999999999999999999999999988655444332 334
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-----
Q 014905 121 SSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT----- 192 (416)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~----- 192 (416)
.++++.+++.|++.|++.+...++..+ ++.|. ++|+++.++.+...++ |. ++++.+++.+.+.
T Consensus 100 ~~~~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~i----g~----~lg~~l~~~l~~~~~~~~ 170 (1146)
T PRK08633 100 LGWFWLAFAVTFLLGAQSAIYSPAKYG-IIPELVGKENLSRANGLLEAFTIV----AI----LAGTALFSFLFESVNGNT 170 (1146)
T ss_pred HccHHHHHHHHHHHHHHHHhhchHHHh-hhHHhcCcccchhhhhHHHHHHHH----HH----HHHHHHHHHHHHhhcccc
Confidence 567999999999999999999998888 88876 6788875555444333 34 4555555555443
Q ss_pred ---hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccc---h---hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHH
Q 014905 193 ---LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEK---K---NLLAQFKGAALAIASDERIALLGAIQSLFEGSMY 263 (416)
Q Consensus 193 ---~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (416)
. .+|++.+....+...+..++.....||.++.++. + ...++..+.++.+++++.++...+...+.....+
T Consensus 171 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 171 PSEI-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred cccc-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 1 1344444333333333333333345554432211 1 0112234566777888887766555555544444
Q ss_pred HHHHhhhcccccCCCCC----chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 014905 264 TFVFLWTPALSPNDEEI----PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPP 339 (416)
Q Consensus 264 ~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (416)
.... +.|.|.++..+. ..+++.+...++.+++.++.+++.|| .+.++.+.++..+..+.........
T Consensus 250 ~~~~-~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r--~~~~~~~~~~~~~~~~~~~~~~~~~------ 320 (1146)
T PRK08633 250 LAQA-NFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR--HIELGLVPLGALGLALSLFLLPTAP------ 320 (1146)
T ss_pred HHHH-hhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ceEccchhHHHHHHHHHHHHHHHhh------
Confidence 4333 777777665444 35777788889999999999999999 6656655555444443333332222
Q ss_pred CCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 340 DVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
+.+...+..++.+++.+...+...+++++..|++.||+++|+.+...+++.
T Consensus 321 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~ 371 (1146)
T PRK08633 321 ---------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGM 371 (1146)
T ss_pred ---------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHH
Confidence 345566677788888888888889999999999999999999887766554
No 76
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=4.5e-22 Score=176.92 Aligned_cols=332 Identities=15% Similarity=0.101 Sum_probs=238.6
Q ss_pred hHHHHHHHH--HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhh
Q 014905 39 MNSYIIVYS--LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLS 115 (416)
Q Consensus 39 ~~~~~~~~~--~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 115 (416)
+|++.+.+. ...++-|...+.+.+.+ +++|+|++|.+++.++..+...+..++.|.+.||+|.|+...++.++..+.
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP 92 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP 92 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence 344444444 34444454443332545 899999999999999999999999999999999999999999998888887
Q ss_pred hh-hccch---hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 014905 116 CV-TKHSS---EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL 188 (416)
Q Consensus 116 ~l-~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 188 (416)
.+ ..++. +++++++.+++.|++.+.. ..... ++++. +++|.+.++. + ..++|.++...++|.+...
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~GasF-av~m~-~~s~~fP~~~qG~AlGI~----g-~GN~G~av~q~~~P~v~~~ 165 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAGASF-AVGMP-NASFFFPKEKQGLALGIA----G-AGNLGVAVAQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhccccee-hcccc-cccccCChhhhhHHHHHh----c-cccccHHHHHHHHHHHHHH
Confidence 77 55554 4569999999999987654 44455 66644 7788884444 4 3345665555666665443
Q ss_pred HHhhhccC---chhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhh-hHHHhhhcchhHHHHHHHHHHHHHHHHH
Q 014905 189 LVDTLALG---PVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFK-GAALAIASDERIALLGAIQSLFEGSMYT 264 (416)
Q Consensus 189 ~~~~~~~~---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (416)
. + |+..-.+..+..++..+..++..+|.++.+... ++.+ ..++.+.++++.|.+++.......++-.
T Consensus 166 ----~--g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~---~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvg 236 (417)
T COG2223 166 ----F--GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV---KPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVG 236 (417)
T ss_pred ----H--hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc---cccchhHHHHHhcCcchHHHHHHHHHHHHHHHH
Confidence 3 5 898888888888887877776766665421111 1112 5678888999999998777766666655
Q ss_pred HHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014905 265 FVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDV 341 (416)
Q Consensus 265 ~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (416)
+.. +.|.|++++.+.+ .|...........+.++..|+++|| .+.+|.+........++............
T Consensus 237 fs~-~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR--~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~---- 309 (417)
T COG2223 237 FSA-YLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR--IGGRRVTLAVFVGMALAAALLSLFLTGFG---- 309 (417)
T ss_pred HHH-HHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh--ccchhHHHHHHHHHHHHHHHHHccccccc----
Confidence 444 9999999877664 6777777888888999999999999 99999988888877766665554442110
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 342 RGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 342 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
.+. +....+..+....++.|..+...+.++..++|+ +-|.+.|+....-++.
T Consensus 310 -~~~---~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lG 361 (417)
T COG2223 310 -HGG---SFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLG 361 (417)
T ss_pred -cCc---chHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhcccc
Confidence 001 456666777778888999898888888888887 4566666665554444
No 77
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=4.7e-21 Score=177.59 Aligned_cols=331 Identities=17% Similarity=0.161 Sum_probs=219.9
Q ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhC-chHHHHHHHHHHHhh
Q 014905 38 FMNSYIIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQG-RKRACVTYCITYMLS 115 (416)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~G-rr~~l~~~~~~~~~~ 115 (416)
.+.++...+++.....+...|++ ++| ++.|+|++|+|.+.+...+...+.++++|.++||++ +||.+.+..+..++.
T Consensus 3 ~~~rLs~~~f~~f~~~G~~~p~~-~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~ 81 (400)
T PF03825_consen 3 LKFRLSLMYFLYFFAYGAFLPYL-PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALA 81 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHH
Confidence 34456666666677777888998 778 999999999999999999999999999999999986 677777776666665
Q ss_pred hh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHH-HHHHHHHHHhh
Q 014905 116 CV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAII-SGLFGNLLVDT 192 (416)
Q Consensus 116 ~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~-~~~l~~~~~~~ 192 (416)
.. ....++++.++...++..+......|..++ +..+. ++++..-+.....-++|..++. .. +..+.+.. +.
T Consensus 82 ~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~ds-i~~~~~~~~~~~YG~iRlwGSiGf~~~~----~~~~~~~~~~~-~~ 155 (400)
T PF03825_consen 82 LLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDS-IALSYLGDRGKDYGRIRLWGSIGFIVAA----LAFGGLLGGYL-GI 155 (400)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHccHHHHHHH-HHHHHcccccCCCCcchhhhhHHHHHHH----HHHHHHHHhhh-cc
Confidence 55 566778888888888888877777777777 65555 3333332222122333333321 11 11122111 11
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc-chhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILASWTENYGDPE-KKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTP 271 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
. +....+++.+...++...... ..|+.+.+++ +++.++....+..+++|||++....+..++.+..... ...+.+
T Consensus 156 ~--~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~-~~~f~~ 231 (400)
T PF03825_consen 156 S--GTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAA-YYTFFS 231 (400)
T ss_pred c--cccHHHHHHHHHHHHHHHHHH-hCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 1 223455555544443333333 3455442222 2221222233445788998887776665555544444 333778
Q ss_pred ccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCccc
Q 014905 272 ALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISL 348 (416)
Q Consensus 272 ~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (416)
.|.++..+. ..+...+...++.++.-...+|+.+| ++.++.+.++.....+-..+......
T Consensus 232 ~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r--~g~~~ll~~a~~~~~vR~~l~a~~~~-------------- 295 (400)
T PF03825_consen 232 IYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR--FGIKWLLLLALVAYAVRWLLYAYFSD-------------- 295 (400)
T ss_pred HHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhcC--------------
Confidence 888875533 35667777788999999999999999 88888888888887777666655532
Q ss_pred chhHHHHH----HHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccc
Q 014905 349 SGSLQLIG----FSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 395 (416)
Q Consensus 349 ~~~~~~~~----~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~ 395 (416)
+.+...+. ..+.|+.++..+.....++.+.+|++.|++++++++...
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~ 346 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALS 346 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHH
Confidence 22333333 345899999999999999999999999999999987643
No 78
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.90 E-value=5.4e-21 Score=183.65 Aligned_cols=322 Identities=13% Similarity=0.052 Sum_probs=204.8
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh-----CchHH-HHHHHHHHHhhhh-hc
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ-----GRKRA-CVTYCITYMLSCV-TK 119 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~~~~l-~~ 119 (416)
.......+..+.+ |.+ ++.|.|.+++|..... .... ++.+++|+++||+ ||||. +..+.+..+++.. .+
T Consensus 23 ~~gl~~~~~~~~l-~~~l~~~g~~~~~ig~~~~~-~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a 99 (491)
T PRK11010 23 ASGLPLALTSGTL-QAWMTVENIDLKTIGFFSLV-GQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMG 99 (491)
T ss_pred HHHHHHHHHHHHH-HHHHHhCCCCHHHHHHHHHH-HHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 4566667777777 666 8889999999997333 3333 6899999999999 99986 5566665555544 33
Q ss_pred cc---hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-h
Q 014905 120 HS---SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD-T 192 (416)
Q Consensus 120 ~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-~ 192 (416)
+. ++++.+.+.+++.+++.+...+...+ +..|. ++|++..++. ..+..+|. ++++.++..+.+ .
T Consensus 100 ~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a-~~~~~~~~~~rg~~~~i~----~~g~~lG~----llg~~l~~~l~~~~ 170 (491)
T PRK11010 100 FLEPGTQLRWLAALAVVIAFCSASQDIVFDA-WKTDVLPAEERGAGAAIS----VLGYRLAM----LVSGGLALWLADRY 170 (491)
T ss_pred HcCCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhHHHHHHH----HHHHHHHH----HHHHHHHHHHHhcc
Confidence 33 47888999999999999988888888 88877 6667664444 34444444 555666666666 3
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccch-hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKK-NLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTP 271 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
. |||..|++.++..++..+..+ ..||++++++++ +.+++..+++++.+++++.+.......+.......... +.+
T Consensus 171 ~--GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~-~~~ 246 (491)
T PRK11010 171 L--GWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMS-LTT 246 (491)
T ss_pred c--CHHHHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3 999999998887777655554 456543221111 11122234667777776666554444444433333223 666
Q ss_pred ccccCCCCCc---hHHHHH-HHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcc
Q 014905 272 ALSPNDEEIP---HGFIFA-TFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGIS 347 (416)
Q Consensus 272 ~~~~~~~~~~---~g~~~~-~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (416)
.|..+..+.+ .+.... ...++.+++.++.+++.|| .+.+|.+.....+..+........... .+
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr--~g~~~~l~i~~~l~~l~~l~~~~l~~~-~~--------- 314 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR--LSLFRALMIFGILQGVSNAGYWLLSIT-DK--------- 314 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHhc-cc---------
Confidence 6665544554 566653 4457889999999999999 676666555444333222211111110 00
Q ss_pred cchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 348 LSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 348 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
+.+.......+..+..+...+...++..+..|++.+++.+|+.+...++.
T Consensus 315 -~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg 364 (491)
T PRK11010 315 -NLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVG 364 (491)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 22333334455455566666777888889999999999988887666554
No 79
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.4e-24 Score=192.76 Aligned_cols=312 Identities=16% Similarity=0.142 Sum_probs=194.3
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFS 143 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (416)
+.+|++++..|++.+.+.+...+++|+.|+++|||+||+++.++..++.++.+ .+++..+|++.++|.+.|+|.+...+
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ 140 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSP 140 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcc
Confidence 68999999999999999999999999999999999999999999999999999 88999999999999999999999999
Q ss_pred hhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcc
Q 014905 144 AFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWT 220 (416)
Q Consensus 144 ~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 220 (416)
..++ +++|. ++|++.. +.+..+...|..++.+.+..++ +.. ..||+.|...+++.++..++.+.+.+
T Consensus 141 ia~s-~IaD~f~~~~Rs~~~----~ify~~ipvGsglG~vvgs~va----~~~-~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 141 IAPS-LIADSFPDDKRSRVL----GIFYFAIPVGSGLGYVVGSVVA----SLT-FWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred cchh-HhhhcCcchhhhHHH----HHhhhhcccccceeEEeeeeec----cCc-cceEEEEEeehHHHHHHHHHHHhhcc
Confidence 9999 99987 6777774 4445555555533334444443 333 14999999999999999998887777
Q ss_pred cCCCCccchh-h-------HHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCC-----CCCchHHH-H
Q 014905 221 ENYGDPEKKN-L-------LAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPND-----EEIPHGFI-F 286 (416)
Q Consensus 221 ~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~-~ 286 (416)
|+++...++. . .....++.+...|++.+....+.....++....+.. |.|.+.... .+.+.+++ .
T Consensus 211 eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sw-w~p~~~~~~~~~~~~~~~~~~ifg 289 (493)
T KOG1330|consen 211 EPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSW-WAPAFIYYSYELIGFDHNATLIFG 289 (493)
T ss_pred CcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccch-hhhhHHHHHHHHhCCccccchhhh
Confidence 6654221111 0 111233455555555444444444444433333222 555554431 11222222 2
Q ss_pred HHH----HHHHHHhhHHHHHHhhcccccch-hHHHHHHHHHH-HHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHH
Q 014905 287 ATF----MLASMLGSSFASRLLAHSSLRVE-SYMQIVFIISS-ASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTF 360 (416)
Q Consensus 287 ~~~----~~~~~~~~~~~~~l~~r~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (416)
.+. .+|.+.|+.+.+++.++++...+ +.-.....+.. ....++....... . ......+.+++.
T Consensus 290 ~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~-------~----~s~~~~~il~~~ 358 (493)
T KOG1330|consen 290 GVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFT-------S----SSMIFGLILFLV 358 (493)
T ss_pred hHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhh-------h----HHHHHHHHHHHH
Confidence 222 45555556666665554312111 11111111111 1111111111100 0 112233344444
Q ss_pred HHhhhc-chhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 361 EACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 361 ~~~~g~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
+..... .+....-+..|.+|+++|.+++++.++..-++
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~f 397 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIF 397 (493)
T ss_pred HHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHh
Confidence 444333 44555567789999999999999877544443
No 80
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.90 E-value=2.4e-21 Score=185.10 Aligned_cols=334 Identities=15% Similarity=0.098 Sum_probs=211.2
Q ss_pred HHHHHHHhHHHHHHHHH-H-H--cCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHHHHhhhh-hccc
Q 014905 48 LMMAGDWLQGPYVYYLY-S-T--YGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCITYMLSCV-TKHS 121 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~-~--~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~l-~~~~ 121 (416)
...++.+...+++ |.| + + +|+|+.+.|.+.+.+.++..++++++|+++|| +|||+++.++.+..+++.+ ..++
T Consensus 21 ~~~~~~~~~~~~L-~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~ 99 (475)
T TIGR00924 21 WERFSYYGMQGIL-AVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS 99 (475)
T ss_pred HHHHHHHHHHHHH-HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc
Confidence 5567777778888 777 4 4 89999999999999999999999999999999 8999999999999999888 7778
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---c---ccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcc
Q 014905 122 SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---N---KRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLAL 195 (416)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~---~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~ 195 (416)
++++.++++|.+.|++.+...+...+ +++|. + +|+... +....+..+|. .++|.+++.+.+..
T Consensus 100 ~~~~~~~~~~~l~g~g~g~~~~~~~~-~~a~~~~~~~~~~r~~~~----~~~~~~~niG~----~ig~~l~g~l~~~~-- 168 (475)
T TIGR00924 100 IYPDLIFYGLGTIAVGSGLFKANPSS-MVGKLYERGDMPRRDGGF----TLFYMSINIGS----FISPLLAGVIAENY-- 168 (475)
T ss_pred ccHhHHHHHHHHHHhccccccCCHHH-HHHHhcCCCCccccccee----hhHHHHHHHHH----HHHHHHHHHHHHhc--
Confidence 88888999999999999988887777 77654 2 244442 33444444555 77777878777776
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhc---ccCCCCcc--chhhHHHhhh---------------------------------
Q 014905 196 GPVAPFDAAACFLAFGMVIILASW---TENYGDPE--KKNLLAQFKG--------------------------------- 237 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~--------------------------------- 237 (416)
+|+..|.+.++..++..+...... ++.+++++ +++.++..+.
T Consensus 169 g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTL 248 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999988765555444333222 11111111 0000000000
Q ss_pred -------------HHHhhhcch--hHHHHHHHHHHHHHHHHHHHHhhhcccccCC-------CCCchHHHHHHHHHHHHH
Q 014905 238 -------------AALAIASDE--RIALLGAIQSLFEGSMYTFVFLWTPALSPND-------EEIPHGFIFATFMLASML 295 (416)
Q Consensus 238 -------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~ 295 (416)
......|+| .+..+.+...++...... .....+.+.++. .+.+.+.+.+...+..++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q-~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil 327 (475)
T TIGR00924 249 AVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQ-MPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVV 327 (475)
T ss_pred HHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHH
Confidence 000000111 122222222222322222 222344444332 222477888888887777
Q ss_pred hhHHHHH----Hhhcccccchh--HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchh
Q 014905 296 GSSFASR----LLAHSSLRVES--YMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWP 369 (416)
Q Consensus 296 ~~~~~~~----l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~ 369 (416)
..++..+ +.||. .+.+. .+.++..+.++++..........+ ..... +.+...+...+.+++.....|
T Consensus 328 ~~p~~~~~~~~l~~~~-~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~---~~~~~---s~~~~i~~~~~~~~ge~~~~p 400 (475)
T TIGR00924 328 GSPVLAMIWTRLGRKG-KDPTTPLKFTLGMLFCGASFLTFAASIWFAD---AGGLT---SPWFMVLIYLFQTLGELMISP 400 (475)
T ss_pred HHHHHHHHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCCcc---CHHHHHHHHHHHHHHHHHHhH
Confidence 7776554 44441 11222 335555555544444332211000 00011 677888899999999999999
Q ss_pred HHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 370 SIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 370 ~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
...++..+..|++.||+.+|+......+...+
T Consensus 401 ~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l 432 (475)
T TIGR00924 401 LGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987655554333
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.90 E-value=1.1e-20 Score=177.82 Aligned_cols=319 Identities=13% Similarity=0.064 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh-----CchH-HHHHHHHHHHh
Q 014905 42 YIIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ-----GRKR-ACVTYCITYML 114 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~~ 114 (416)
++.+++.......+..+.+ |.| ++.|+|.+++|++..+... .+..+++|+++||+ |||| .+.++....++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~-~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTL-QAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 4556666677778888888 777 8999999999999777665 69999999999999 8776 67776666655
Q ss_pred hhh-hccc---hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 014905 115 SCV-TKHS---SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGN 187 (416)
Q Consensus 115 ~~l-~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~ 187 (416)
+.. ..+. ++++.+++..++.+...+...++..+ ++.|. ++|++..+... .|..+|. ++++.++.
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~r~~~~~~~~----~g~~~g~----i~g~~l~~ 151 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDA-YSTDVLHPEERGAGAAVKV----LGYRLAM----LVSGGLAL 151 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhhHHHHHHH----HHHHHHH----HHHhHHHH
Confidence 544 3443 45777888888888888888888888 88877 55777654443 3334444 55556666
Q ss_pred HHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccc-hhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 014905 188 LLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEK-KNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFV 266 (416)
Q Consensus 188 ~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (416)
.+.+.. +|||..|++.++..++..+... ..||+++++++ ++.+++.++++++++|||.++.......+.........
T Consensus 152 ~l~~~~-~gw~~~f~i~a~~~l~~~l~~~-~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~ 229 (402)
T PRK11902 152 WLADRV-LGWGNTYLLMAGLMLAGALTTL-WAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAG 229 (402)
T ss_pred HHHhcc-cCHHHHHHHHHHHHHHHHHHHH-hcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHH
Confidence 655531 3999999998887766555433 45554332211 11123345677888999887766555555443322212
Q ss_pred HhhhcccccCCCCCc---hHHHHHHHH-HHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 014905 267 FLWTPALSPNDEEIP---HGFIFATFM-LASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVR 342 (416)
Q Consensus 267 ~~~~~~~~~~~~~~~---~g~~~~~~~-~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (416)
. +.+.+..++.+.+ .+......+ ++.+++..+.+++.|| .+.+|.+........+............ +
T Consensus 230 ~-~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r--~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~---- 301 (402)
T PRK11902 230 S-LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR--LGLYRSLMLFGVLQAVSNLGYWVLAVTP-K---- 301 (402)
T ss_pred H-HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHhcC-C----
Confidence 2 3333444444543 555554443 4578899999999999 7766665554444332222221111100 0
Q ss_pred CCCcccchhHHHHHHH----HHHHhhhcchhHHHHHHhccCCccccceee
Q 014905 343 GGGISLSGSLQLIGFS----TFEACVGIFWPSIMKMRSQYIPEEARSTIM 388 (416)
Q Consensus 343 ~~~~~~~~~~~~~~~~----l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~ 388 (416)
+.+....... ..++..+...+....++++.+|.++++...
T Consensus 302 ------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (402)
T PRK11902 302 ------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLS 345 (402)
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 2343444433 334445556777777888888877766433
No 82
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=2.7e-21 Score=184.81 Aligned_cols=346 Identities=11% Similarity=0.077 Sum_probs=212.0
Q ss_pred hhHHHHHHHH---HHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHH
Q 014905 38 FMNSYIIVYS---LMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCIT 111 (416)
Q Consensus 38 ~~~~~~~~~~---~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~ 111 (416)
.+|.++..++ ....+.+...+++ +.| +++|.+.++.+++.+.+.....+..+++|+++|| +||||++.++.+.
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l-~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGIL-AVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 3444444443 4456666667777 666 6899999999999999998888889999999999 9999999999999
Q ss_pred HHhhhh-hccchhHH-HHHHHHHHHHhhhhhhhhhhhhhhhhhh---c--ccCcchhhHHHHHHHHHHHHhhHHHHHHHH
Q 014905 112 YMLSCV-TKHSSEYK-ILMLGRIFGGIATSLLFSAFESWLVAEH---N--KRGFDQQWLSETFSKAIFLGNGLVAIISGL 184 (416)
Q Consensus 112 ~~~~~l-~~~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~--~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 184 (416)
+.++.+ +.++++.. .++++|.++|++.|...+...+ ++.|. + +|+.+ . +.+..+..+|. .++|.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~-li~~~~p~~~~~~~~~---~-~~~~~~~nig~----~~g~~ 161 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPAS-LLSKCYPPKDPRLDGA---F-TLFYMSINIGS----LISLS 161 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHH-HHHHhcCCCchhhhcc---h-hHHHHHHHHHH----HHHHH
Confidence 999888 77766544 4558899999999999888888 88865 2 23333 3 44555555556 77777
Q ss_pred HHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc---ccCC-CCcc-chhhHH-------------------Hhhh---
Q 014905 185 FGNLLVDTLALGPVAPFDAAACFLAFGMVIILASW---TENY-GDPE-KKNLLA-------------------QFKG--- 237 (416)
Q Consensus 185 l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~---~~~~-~~~~-~~~~~~-------------------~~~~--- 237 (416)
+++++.++. |||+.|++.++..++..+...... ++.+ ++++ +.+..+ +...
T Consensus 162 l~g~l~~~~--gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (489)
T PRK10207 162 LAPVIADKF--GYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVAN 239 (489)
T ss_pred HHHHHHHhh--ChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 777777776 999999987554443333322111 1211 1101 000000 0000
Q ss_pred -------------------HHHhhhcchhHHHHHHH-HHHHHHHHHHHHHhhhcccccCCC-----CC--chHHHHHHHH
Q 014905 238 -------------------AALAIASDERIALLGAI-QSLFEGSMYTFVFLWTPALSPNDE-----EI--PHGFIFATFM 290 (416)
Q Consensus 238 -------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~g~~~~~~~ 290 (416)
..++..|+|.+....+. ........+.......+.+.++.. +. +.+.+.+...
T Consensus 240 ~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~ 319 (489)
T PRK10207 240 LVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNP 319 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhH
Confidence 00012233332222211 122222222222224455554311 11 2445555555
Q ss_pred HHHHHhhHHHHHHhhcccccchh-------HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHh
Q 014905 291 LASMLGSSFASRLLAHSSLRVES-------YMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEAC 363 (416)
Q Consensus 291 ~~~~~~~~~~~~l~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 363 (416)
+..++.+++.+++.|| .++|+ ++..+..+.++.+............. ++.. +.+.......+.+++
T Consensus 320 ~~iii~~pl~~~l~~r--l~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~---~~~~--s~~~~i~~~~l~g~G 392 (489)
T PRK10207 320 FWVVVASPILAGIYTH--LGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADA---QGLT--SPWFIVLVYLFQSLG 392 (489)
T ss_pred HHHHHHHHHHHHHHHH--HhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CCcc--CHHHHHHHHHHHHHH
Confidence 6676778888888888 44443 35555555444433221100000000 0111 456677888889999
Q ss_pred hhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 364 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 364 ~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
.+...|...+.+.+..|++.+|.++|+.+...++...++
T Consensus 393 e~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg 431 (489)
T PRK10207 393 ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLG 431 (489)
T ss_pred HHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887776655443
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.1e-19 Score=160.55 Aligned_cols=313 Identities=17% Similarity=0.153 Sum_probs=223.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc---cch
Q 014905 47 SLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK---HSS 122 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~---~~~ 122 (416)
++..+.+....+.+|.+.+.++++..|.+++..+++.++.+.+++.|++.||+|+|+.++.++.++++++. .. ...
T Consensus 23 fl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~ 102 (422)
T COG0738 23 FLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK 102 (422)
T ss_pred HHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 36666677777787333489999999999999999999999999999999999999999999999999887 42 445
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-------
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT------- 192 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~------- 192 (416)
++..++++-++.|.|.+...++.+. +++.. ++.....+..+..++.|. +++|.+++.+..+
T Consensus 103 ~y~~FL~~lFila~Gi~~LetaaNp-~v~~lg~~~~a~~rlnl~q~fn~lGa--------~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETAANP-YVTLLGKPESAAFRLNLAQAFNGLGA--------ILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhccch-HHHHhCCchhHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHhhhhhccC
Confidence 8899999999999999999999999 88855 223334344444444444 5555555554431
Q ss_pred -------h---ccCchhHHHHHHHHHHHHHHHHHHhc-ccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHH
Q 014905 193 -------L---ALGPVAPFDAAACFLAFGMVIILASW-TENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGS 261 (416)
Q Consensus 193 -------~---~~~w~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (416)
. ...|+.+|...+....+..+...... |+.+.+++++ .+..+....+++|+|+.+.-.+..+++-+.
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~--~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~ 251 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSL--GASGSAGLSSLFQNKHLRLGVLAIFLYVGA 251 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccc--cccccchHHHHHhChHHHHHHHHHHHHHhH
Confidence 0 02478888887777666666554332 3322221111 111122567889999988887777777444
Q ss_pred HHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCC
Q 014905 262 MYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETP 338 (416)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (416)
--.... |++.|..+..+.+ .....+....+.++|+++..++.+| ++.+|.+.....+....+....+..
T Consensus 252 Eva~gs-fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~--~~~~k~Laf~a~~~ill~~~~~l~~----- 323 (422)
T COG0738 252 EVAIGS-FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR--IKPEKYLAFYALIAILLLLAVALIG----- 323 (422)
T ss_pred HHHHHH-HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 444233 8888888755543 6777788899999999999999998 8888888776655554444444433
Q ss_pred CCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeee
Q 014905 339 PDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 390 (416)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~ 390 (416)
+ ...+....+.|++.++.+|++++...+..| ++...+.++
T Consensus 324 ----------g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~ 363 (422)
T COG0738 324 ----------G-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGL 363 (422)
T ss_pred ----------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccccccee
Confidence 2 446677788899999999999999999999 444444443
No 84
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.3e-21 Score=183.39 Aligned_cols=308 Identities=19% Similarity=0.173 Sum_probs=215.8
Q ss_pred HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc--hhHHHHHHHHHHHHhhhhhhh
Q 014905 66 TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS--SEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 66 ~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~--~~~~~l~~~r~l~G~~~~~~~ 142 (416)
++++|++|.|++.+..+.|+++++.+.|+++||+|-|+++..+.+..+++.+ ...+ .+++.+++.|+++|++.+..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 5788999999999999999999999999999999999999999888888776 3333 366788999999999999999
Q ss_pred hhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-hccCchhHHHHHHHHHHHHHHHHHHh
Q 014905 143 SAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT-LALGPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 143 ~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~-~~~~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
|+... +.+.+ ++|++..+.. ..+..+|. +++..+++.+.+. . ||+.+|++.+...++..++...+
T Consensus 147 pa~~~-i~~~W~P~~Ers~~~ail----~~g~q~g~----v~~mp~sg~lc~s~~--GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 147 PAIGS-ILAKWAPPNERSTFIAIL----TAGSQLGT----IITMPVSGLLCESSL--GWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred hhhhc-eeeeECCHHHHHHHHHHH----HHHHHHHH----HHHHHhHHHHhccCC--CCchHHHHHHHHHHHHHHHHHHH
Confidence 98888 88866 7788874444 33334445 6666777877776 5 99999999999998888877766
Q ss_pred cccCCCCcc---chhhH--------HH----hhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc--
Q 014905 219 WTENYGDPE---KKNLL--------AQ----FKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-- 281 (416)
Q Consensus 219 ~~~~~~~~~---~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (416)
..|+|.+.+ ++|.+ ++ .+.+++++++++.+|.+.+..+....+.+.+.. |.|.|+++..+.+
T Consensus 216 ~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~-y~PtY~~~VL~f~v~ 294 (466)
T KOG2532|consen 216 YSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLT-YLPTYLKEVLGFDVR 294 (466)
T ss_pred hcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHhCCChh
Confidence 666554421 11100 01 234799999999999998888888888888666 9999999877764
Q ss_pred -hHHHHHHHHHHHHHhhHHHHHHhhccccc-----chhHHHHHHHHHHHH--HHHHHHhhccCCCCCCCCCCcccchhHH
Q 014905 282 -HGFIFATFMLASMLGSSFASRLLAHSSLR-----VESYMQIVFIISSAS--LLIPILTNFLETPPDVRGGGISLSGSLQ 353 (416)
Q Consensus 282 -~g~~~~~~~~~~~~~~~~~~~l~~r~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (416)
.|+..++..+...+..++.|.++||...+ .+|++.-.....+.. +..+.+... . +.+..
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~---------~----~~~~a 361 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD---------E----HRLLA 361 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC---------C----cchHH
Confidence 88888889999999999999999985221 122222222222212 222222211 0 12334
Q ss_pred HHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 354 LIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 354 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
+.++.+.....|...+..+.-..+. .+++-+..+|+.+...++..
T Consensus 362 ~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 362 VILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAG 406 (466)
T ss_pred HHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHH
Confidence 4444444344444444444433333 45567888888776666543
No 85
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=2.4e-19 Score=172.40 Aligned_cols=336 Identities=15% Similarity=0.115 Sum_probs=204.8
Q ss_pred hhHHHHHHHH---HHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHH
Q 014905 38 FMNSYIIVYS---LMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCIT 111 (416)
Q Consensus 38 ~~~~~~~~~~---~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~ 111 (416)
.++.++..+. ....+.+...+++ +.| +++|+|+++.+++.+.+........+++|+++|| +|||+++..+.+.
T Consensus 19 ~p~~~~~~~~~~~~~~~~~y~~~~~l-~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 19 QPKAFYLIFSIELWERFGYYGLQGIM-AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 3344444443 4445555666666 555 7899999999888888776666667789999999 5999999999988
Q ss_pred HHhhhh-hccch-hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 014905 112 YMLSCV-TKHSS-EYKILMLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGN 187 (416)
Q Consensus 112 ~~~~~l-~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~ 187 (416)
..++.. +.+++ +.+.+.++|.++|++.+...+...+ ++.|. +++.+..+.. ..+..+..+|. .++|.+++
T Consensus 98 ~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~-l~~~~f~~~~~~~~~~~-~~~~~~~~iG~----~~gp~i~g 171 (500)
T PRK09584 98 LAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSS-LLSTCYEKDDPRLDGAF-TMYYMSINIGS----FFSMLATP 171 (500)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHH-HHHHhcCCCchhhhhcc-hHHHHHHHHHH----HHHHHHHH
Confidence 888877 66653 5667778899999999988877777 77765 1211211112 33444445555 88888888
Q ss_pred HHHhhhccCchhHHHHHHHHHHHHHH---HHHHhcccCCCCccc--hhhHHH-------------------hhh------
Q 014905 188 LLVDTLALGPVAPFDAAACFLAFGMV---IILASWTENYGDPEK--KNLLAQ-------------------FKG------ 237 (416)
Q Consensus 188 ~~~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~-------------------~~~------ 237 (416)
++.+.. |||+.|.+.++..++..+ ......+|..++.++ .+..+. ..+
T Consensus 172 ~l~~~~--g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (500)
T PRK09584 172 WLAAKY--GWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMAL 249 (500)
T ss_pred HHHHhh--CHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 888876 999999988765444332 222233332111110 000000 000
Q ss_pred ---------H-HHh---hhc--chhHHHHHHHHHHHHHHHHHHHHhhhccccc----CC-----CC--CchHHHHHHHHH
Q 014905 238 ---------A-ALA---IAS--DERIALLGAIQSLFEGSMYTFVFLWTPALSP----ND-----EE--IPHGFIFATFML 291 (416)
Q Consensus 238 ---------~-~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~--~~~g~~~~~~~~ 291 (416)
. .++ ..+ +++.+.. +........++.... ..|.+.. +. .+ .+.+.+.+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~f~~~~~-q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i 327 (500)
T PRK09584 250 GVVALGIVVIFGKEAFAMKGAARRKMIVA-FILMLEAIIFFVLYS-QMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPF 327 (500)
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHHHHHHHHHHH-HhccHHHHHHHHhccccccceEECHHHHHHHhHH
Confidence 0 000 011 1222222 222222333333222 3333322 11 12 236667777776
Q ss_pred HHHHhhHHH----HHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcc
Q 014905 292 ASMLGSSFA----SRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIF 367 (416)
Q Consensus 292 ~~~~~~~~~----~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (416)
..++..++. +++.|| .+..+.+.++..+.++.+..........++ ++.. +.+.......+.+++....
T Consensus 328 ~iil~~p~~~~~~~~l~~r--~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~----~~~v--s~~~~~~~~~l~~~ge~~~ 399 (500)
T PRK09584 328 WIMIGSPILAAIYNKMGDR--LPMPHKFAIGMVLCSGAFLVLPLGAKFAND----AGIV--SVNWLIASYGLQSIGELMI 399 (500)
T ss_pred HHHHHHHHHHHHHHHhCcC--CCcHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCcc--CHHHHHHHHHHHHHHHHHH
Confidence 666666665 555555 556667777777777666554443321110 1111 4567788888999999999
Q ss_pred hhHHHHHHhccCCccccceeeeeee
Q 014905 368 WPSIMKMRSQYIPEEARSTIMNFFR 392 (416)
Q Consensus 368 ~~~~~~~~~~~~p~~~rg~~~g~~~ 392 (416)
.|...+++.+..|++.||+++|+..
T Consensus 400 ~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 400 SGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred hHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 9999999999999999999999764
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.87 E-value=2.9e-19 Score=167.59 Aligned_cols=333 Identities=13% Similarity=0.005 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHH--HHHHHHHHHHHHhhHhh-hhhhhCchHHHHHHHHH-HH--hhh
Q 014905 44 IVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQL--FIAGFGSSMLFGTLVGS-LADKQGRKRACVTYCIT-YM--LSC 116 (416)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i--~~~~~~~~~i~~~~~G~-l~Dr~Grr~~l~~~~~~-~~--~~~ 116 (416)
.+++...+...+..|++ |.+ ++.|.|++++|++ .+.+.+...+.+|+.++ .+||+||||..++.+.. .. +..
T Consensus 8 ~ly~~~g~~~~~~~p~l-p~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~ 86 (390)
T TIGR02718 8 LLYLSQGIPIGLAMDAL-PTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLAS 86 (390)
T ss_pred HHHHHHHhHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHH
Confidence 34446667778888999 777 9999999999997 46778889899999955 79999999987665422 12 111
Q ss_pred h--hccchh-HHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 117 V--TKHSSE-YKILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 117 l--~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
+ .....+ ..+++......++..+...+..++ +..|.. |++..+..+.....+..+|. .+++...+.+.+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~-~~~~~~-~~~~~~~~~~~~~~g~~lG~----~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 87 LALVGPDVAGAGWAVGLLACASLASATQDIATDG-MAAEHF-NGRTLAKGNAVQIAGVMIGF----FGGGAGTLVLFGKF 160 (390)
T ss_pred HHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhC-CHhhhhHHHHHHHHHHHHHH----HHHHHHHHHHHHHh
Confidence 1 112222 333344445555666666666666 555442 22222223344444444555 77777777777776
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 014905 194 ALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPAL 273 (416)
Q Consensus 194 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (416)
|||.+|++.+++.++..+......||+++++++ +++..++.++.+|+|+.+.......+.......... +.+.|
T Consensus 161 --gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 234 (390)
T TIGR02718 161 --GQRPAFLLVACVPLASLVCVLWLKDRAVASPEA---PLARRASLFRFFRRPLAWSLLALALLSAMTAVSGFG-LSKLY 234 (390)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc---chhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHH-HhhHH
Confidence 999999999988877666655344443322111 112234567788888776665555555444444333 66777
Q ss_pred ccCCCCCc---hHHHHHHHH-HHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccc
Q 014905 274 SPNDEEIP---HGFIFATFM-LASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLS 349 (416)
Q Consensus 274 ~~~~~~~~---~g~~~~~~~-~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (416)
.++ .+.+ .|....... ...+++..+.+++.|| .+.+|.+..+.................... + +
T Consensus 235 l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r--~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~----~ 302 (390)
T TIGR02718 235 LVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR--AGLWRTFILGVGLAGSLALLWFAQAAFWLA-----P----G 302 (390)
T ss_pred HHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHcccC-----C----c
Confidence 766 3554 566655554 4666778899999999 777776665554432222221111110000 0 2
Q ss_pred hhHHHHHHHHHHHhhhcchhHHHHHHhccCCc-cccceeeeeeecccceeeee
Q 014905 350 GSLQLIGFSTFEACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 350 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~rg~~~g~~~~~~~~~~~~ 401 (416)
.........+.++..+...+...+...+..++ +.+++.+++.+...++...+
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~ 355 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELI 355 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHH
Confidence 22233333444566777777777777777766 88999999888776665444
No 87
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.8e-20 Score=172.50 Aligned_cols=316 Identities=16% Similarity=0.182 Sum_probs=199.9
Q ss_pred HHcC--CChhhH----HHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----hccchhHHHHHHHHHHH
Q 014905 65 STYG--FGKGEI----GQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----TKHSSEYKILMLGRIFG 134 (416)
Q Consensus 65 ~~~~--~s~~~~----g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~~~~~~~~~l~~~r~l~ 134 (416)
+++| .|+++. +.+.+++.++.++|+...|.++||+|||+.+.++.+...++.+ ....+++++++++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4556 444443 7778899999999999999999999999999988666665544 34557899999999999
Q ss_pred Hhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH--HHhhhccCchhHHHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL--LVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~--~~~~~~~~w~~~f~~~~~~~~ 209 (416)
|+..+......+. ++.|. +.||...... .++..+|. +++..++.. +.+. ..|++.+....+..+
T Consensus 127 Gl~~gl~~~~~pm-yl~E~sP~~~RG~~g~~~----~~~~~~g~----ll~~~~~l~~ilGt~--~~W~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 127 GLACGLSTGLVPM-YLTEISPKNLRGALGTLL----QIGVVIGI----LLGQVLGLPSLLGTE--DLWPYLLAFPLIPAL 195 (485)
T ss_pred HHHhHHHHHHHHH-HHhhcChhhhccHHHHHH----HHHHHHHH----HHHHHHccHHhcCCC--cchHHHHHHHHHHHH
Confidence 9999999998888 99887 7788864444 44444444 333222221 1122 269988888888877
Q ss_pred HHHHHHHHhcccCCCC-----ccch-----------------hh-------HHH-----hhhHHHhhhcchhHHH---HH
Q 014905 210 FGMVIILASWTENYGD-----PEKK-----------------NL-------LAQ-----FKGAALAIASDERIAL---LG 252 (416)
Q Consensus 210 ~~~~~~~~~~~~~~~~-----~~~~-----------------~~-------~~~-----~~~~~~~~~~~~~~~~---~~ 252 (416)
+..+... +.||+|+- .+++ +. +++ ++.+++++++|+.... +.
T Consensus 196 ~~l~~l~-~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~ 274 (485)
T KOG0569|consen 196 LQLALLP-FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIG 274 (485)
T ss_pred HHHHHHh-cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHH
Confidence 7777665 78888751 0000 00 000 1125667777733322 22
Q ss_pred H-HHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHH
Q 014905 253 A-IQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLI 328 (416)
Q Consensus 253 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~ 328 (416)
+ .....+.........|...++++. +.+ .-......++...+.++++.++.|| .|+|+.++.+..+..+...+
T Consensus 275 ~~v~~~qq~sGi~ai~~Yst~i~~~a-G~~~~~a~~an~~~g~v~~~~t~~~~~lid~--~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 275 IVVSFAQQFSGINAIFFYSTSIFKTA-GFTPEEAQYANLGIGIVNLLSTLVSPFLIDR--LGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHHHHhcCcceeHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHH
Confidence 2 222223333332333555555432 332 4555566688888999999999999 77666666666655544443
Q ss_pred HHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc-chhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 329 PILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
........+. .+ .+-.+..+.+.+++.+.++. ..|..+-+.+|++|++.|++++++......+...+
T Consensus 352 ~~~~~~l~~~-----~~-~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fi 419 (485)
T KOG0569|consen 352 MSIALFLSNS-----FG-SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFI 419 (485)
T ss_pred HHHHHHHHHH-----hh-hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHH
Confidence 3322211100 00 00112234555666666666 57888999999999999999998877665554333
No 88
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.86 E-value=1.2e-18 Score=159.52 Aligned_cols=335 Identities=12% Similarity=0.091 Sum_probs=211.0
Q ss_pred ccchhhhHHHHHHHHHHHHHH-HhHHHHHHHHH-HHcCCChhh-HHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHH
Q 014905 33 SSFNSFMNSYIIVYSLMMAGD-WLQGPYVYYLY-STYGFGKGE-IGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYC 109 (416)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~-~~~~~s~~~-~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~ 109 (416)
.+.+.|++..++++....+.+ -...|+..|.. +++|+|++| .|.+.+++..++++++++.|+++||+|.|+++.++.
T Consensus 20 ~~~~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~ 99 (511)
T TIGR00806 20 RELKSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQA 99 (511)
T ss_pred chhcchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 345677776655554333332 23334443444 799999999 999999999999999999999999999999999999
Q ss_pred HHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHH
Q 014905 110 ITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLF 185 (416)
Q Consensus 110 ~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l 185 (416)
+..++... ..+++++..+.+.|++.|++.+... +... ++..+ ++|+++.+.. ..+..+|. .+++++
T Consensus 100 l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~s-yI~~WfP~kER~ratsi~----~sg~~vG~----~Ia~~L 169 (511)
T TIGR00806 100 LSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSS-YIFSLVPPSRYQRAAAYS----RAAVLLGV----FLSSVL 169 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHCCHHHHHHHHHHH----HHHHHHHH----HHHHHH
Confidence 99999888 8889999999999999999999998 7777 88755 7788874444 44445555 555566
Q ss_pred HHHHHhhhccCchhHHH---HHHHHHHHHHHHHHHhcccCCC------Cc----------c---ch----hh---H----
Q 014905 186 GNLLVDTLALGPVAPFD---AAACFLAFGMVIILASWTENYG------DP----------E---KK----NL---L---- 232 (416)
Q Consensus 186 ~~~~~~~~~~~w~~~f~---~~~~~~~~~~~~~~~~~~~~~~------~~----------~---~~----~~---~---- 232 (416)
++. ...+ |||.-.. +......+++++.+ +.|..++ ++ + ++ +. +
T Consensus 170 ~ql-l~s~--gWr~y~~Ln~Isl~s~~~a~~~a~-~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (511)
T TIGR00806 170 GQL-LVTL--GWISYSTLNIISLVFMTFSVFLAL-FLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRD 245 (511)
T ss_pred HHH-HHhc--CchhHHHHHHHHHHHHHHHHHHHH-hCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhh
Confidence 666 3334 7876443 33333444444444 3332111 00 0 00 00 0
Q ss_pred ---HHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCC---CCchHHHHHHHHHHHHHhhHHHHHHhhc
Q 014905 233 ---AQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDE---EIPHGFIFATFMLASMLGSSFASRLLAH 306 (416)
Q Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~l~~r 306 (416)
+.....+++..+|+.++...+-..+...+.+.... |....-.+.. +.-.|.+-+...+.+.+.++..|++-.+
T Consensus 246 ~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~-Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~ 324 (511)
T TIGR00806 246 SFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITY-YVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIR 324 (511)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHH-HHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 01112344445666655554444433333333222 2222221111 1125666666666677788888887555
Q ss_pred ccccchhHHHHH-HHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccc
Q 014905 307 SSLRVESYMQIV-FIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARS 385 (416)
Q Consensus 307 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg 385 (416)
+.....+.++ .......+++...... |.|..++..++++..+.+..+....-+++...+|.-|
T Consensus 325 --w~~~~~l~l~v~s~~~~gll~~m~~t~--------------~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~a 388 (511)
T TIGR00806 325 --WARWSKLLIAVVSAIQAGLVFWMSQSH--------------DIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCA 388 (511)
T ss_pred --chhhHHHHHHHHHHHHHHHhhhhhccc--------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceE
Confidence 3211112221 1122222222222222 7899999999999999999999999999999999999
Q ss_pred eeeeeeeccccee
Q 014905 386 TIMNFFRIPLNVF 398 (416)
Q Consensus 386 ~~~g~~~~~~~~~ 398 (416)
-.+|+.++..-+.
T Consensus 389 LvFGiNtfvAl~L 401 (511)
T TIGR00806 389 LVFGINTFVATAL 401 (511)
T ss_pred EEEecHHHHHHHH
Confidence 9999877654443
No 89
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=9.8e-21 Score=166.12 Aligned_cols=227 Identities=20% Similarity=0.260 Sum_probs=178.7
Q ss_pred HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhh
Q 014905 66 TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSA 144 (416)
Q Consensus 66 ~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (416)
+.+-+++++|++++...+.+++.+++.|.+.||+|+|..++++...+..+.+ .++.+++++++++|.+||+|.+...++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 5566779999999999999999999999999999999999999999988888 999999999999999999999999999
Q ss_pred hhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcc
Q 014905 145 FESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWT 220 (416)
Q Consensus 145 ~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 220 (416)
..+ ++++. ++|+.+.+..-+.. .+|. ++||.+|+.+.+.. |.+.+|.+.++++++...+.++..+
T Consensus 180 gla-mlAd~f~~d~er~~vmGialgfi----slG~----lvgPpfGGilYe~~--Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 180 GLA-MLADVFPEDNERGSVMGIALGFI----SLGV----LVGPPFGGILYEFA--GKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hHH-HHHHHcccchhhhHHHHHHHHHH----hccc----eecCCcccchHhhc--CCcCcHHHHHHHHHHHHHHHHheeC
Confidence 999 88855 66788754442222 2334 78889999999987 9999999999999999888886666
Q ss_pred cCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccc---ccCCC---CCchHHHHHHHHHHHH
Q 014905 221 ENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPAL---SPNDE---EIPHGFIFATFMLASM 294 (416)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~g~~~~~~~~~~~ 294 (416)
+++.+++ ++++..++++++++|.++.........+.+.-. .-|.+ ..+.. +.+.|..+....+...
T Consensus 249 p~~~~~~----~~~~~~~~~~Ll~dP~I~~~agai~~~n~~laf----LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ 320 (464)
T KOG3764|consen 249 PTEMDPD----STEQGTPMWSLLMDPYILLIAGAITFSNSSLAF----LEPTLSLWMLETMFTPGWEVGLAFLPASLSYA 320 (464)
T ss_pred ccccCcc----ccccCccHHHHHhCchHhhhhcchhhccchHHH----hCcccHHHHHHhccCCCcceeeeecccccchh
Confidence 5443332 122344678899999988876655555544443 33433 33332 3357888888899999
Q ss_pred HhhHHHHHHhhcccccchh
Q 014905 295 LGSSFASRLLAHSSLRVES 313 (416)
Q Consensus 295 ~~~~~~~~l~~r~~~~~~~ 313 (416)
++..+.+++.|| .+..|
T Consensus 321 ig~~lfg~la~k--~~~~~ 337 (464)
T KOG3764|consen 321 IGTNLFGKLADK--YPHLR 337 (464)
T ss_pred ccCchHHHHHHh--cCchh
Confidence 999999999999 55444
No 90
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.84 E-value=9e-20 Score=179.18 Aligned_cols=261 Identities=12% Similarity=0.100 Sum_probs=180.5
Q ss_pred HhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch---------
Q 014905 54 WLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS--------- 122 (416)
Q Consensus 54 ~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~--------- 122 (416)
....+.+ +.. ++++++.++.|++.+.+.++..++.++.|++.||+||||.+.++.++++++.+ .++.+
T Consensus 50 g~~~~~l-~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 50 GLVNSSL-TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred HHHHhhc-hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 3444555 444 79999999999999999999999999999999999999999999888888877 54432
Q ss_pred ------------------------------------------hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccC
Q 014905 123 ------------------------------------------EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRG 157 (416)
Q Consensus 123 ------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~ 157 (416)
.+..++++|+++|+|.+...+...+ ++.|. ++|+
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~-~i~d~~~~~~~~ 207 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS-YIDDFAKSKNSP 207 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch-hhhccCCccccH
Confidence 2456789999999999999999999 99988 5566
Q ss_pred cchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh-cc-------------------CchhHHHHHHHHHHHHHHHHHH
Q 014905 158 FDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL-AL-------------------GPVAPFDAAACFLAFGMVIILA 217 (416)
Q Consensus 158 ~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~-~~-------------------~w~~~f~~~~~~~~~~~~~~~~ 217 (416)
.+. +.+..+..+|. .+++.+++.+.+.+ +| +|+..|++.+++.++..+..+.
T Consensus 208 ~~~----~i~~~~~~iG~----~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 208 LYI----GILESIAVFGP----AFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred HHH----HHHHHHHHhhh----HHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 653 34444445555 44445555444321 00 3788898888877776655543
Q ss_pred hcccCCCCcc--c-----hhh---------------HHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 014905 218 SWTENYGDPE--K-----KNL---------------LAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 218 ~~~~~~~~~~--~-----~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
+.++.+++.+ + ++. .++.....+.+++||.++...+...+.....+.+.. |.|.|++
T Consensus 280 ~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~lP~yl~ 358 (633)
T TIGR00805 280 FPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT-FLPKYLE 358 (633)
T ss_pred CccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3322221100 0 000 011123466788999988887777777777777666 9999998
Q ss_pred CCCCCc---hHHHHHHHHH-HHHHhhHHHHHHhhcccccchhHHHHHHHHHHHH
Q 014905 276 NDEEIP---HGFIFATFML-ASMLGSSFASRLLAHSSLRVESYMQIVFIISSAS 325 (416)
Q Consensus 276 ~~~~~~---~g~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 325 (416)
+..+.+ .+.+.....+ +.+++.++.|++.||.+.+.++.+........+.
T Consensus 359 ~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 359 NQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 876765 5555555544 5678999999999995444555555544444433
No 91
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.84 E-value=2.2e-18 Score=156.97 Aligned_cols=322 Identities=12% Similarity=0.104 Sum_probs=197.7
Q ss_pred HHHHHHHHhHHHHHHHHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHH--hhhh--hcc
Q 014905 47 SLMMAGDWLQGPYVYYLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYM--LSCV--TKH 120 (416)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~--~~~l--~~~ 120 (416)
+...+..+...|+. +++ + +.|+|++|+|.++++..+...+.+|+.|.++||.|.||-++....... .+.. ..+
T Consensus 17 f~~Ff~~gi~~pF~-~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~ 95 (412)
T PF01306_consen 17 FFYFFIWGIFLPFF-PIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVF 95 (412)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTH
T ss_pred HHHHHHHHHHHHHH-HHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555677888898 777 4 589999999999999999999999999999999996665554432221 2222 111
Q ss_pred c----hhHH-HHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc
Q 014905 121 S----SEYK-ILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA 194 (416)
Q Consensus 121 ~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~ 194 (416)
. .|.+ ..+++-+..|+......+..++ +..+. ++.+.. . +-......+|. .++..++|.+.+.
T Consensus 96 ~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea-~~er~sr~~~fe---Y-G~~R~wGSig~----ai~s~~~G~L~~i-- 164 (412)
T PF01306_consen 96 GPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEA-YAERVSRRNGFE---Y-GRARMWGSIGF----AIASLLAGILFNI-- 164 (412)
T ss_dssp HHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHH-HHHHHHHHHSS----H-HHHHHHHHHHH----HHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHHH-HHHHHHHHhcCC---c-chHHHHhhHHH----HHHHHHhheeeee--
Confidence 1 2322 2223333334444444555555 54444 333444 2 22222223334 5666777777654
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcccCCCCccch-----hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHH--
Q 014905 195 LGPVAPFDAAACFLAFGMVIILASWTENYGDPEKK-----NLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVF-- 267 (416)
Q Consensus 195 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 267 (416)
+.+..|++.....++..++.....|+.+++.+.+ +.++...+...+++|+|++|.+.+...........+-.
T Consensus 165 -~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf 243 (412)
T PF01306_consen 165 -NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQF 243 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888777666555555543444333221111 11111223456788999999886654444433333322
Q ss_pred -hhhcccccCC-CCC-chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 014905 268 -LWTPALSPND-EEI-PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGG 344 (416)
Q Consensus 268 -~~~~~~~~~~-~~~-~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (416)
.|...+.++. .+. ..|...+...+...+.-.+.+++.+| ++.|+.++++..+..+-.....+..
T Consensus 244 ~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r--ig~k~~Lllag~i~~iRi~~~~~~~----------- 310 (412)
T PF01306_consen 244 PIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR--IGAKNLLLLAGVIMAIRIIGSGFAT----------- 310 (412)
T ss_dssp HHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh--cChHhHHHHHHHHHHHHHHHHhhhc-----------
Confidence 1223333322 111 27888888899999999999999999 9999999999888887766655554
Q ss_pred CcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeee-eccccee
Q 014905 345 GISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF-RIPLNVF 398 (416)
Q Consensus 345 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~-~~~~~~~ 398 (416)
+.+.....-.+.++-.+.......-++++.+|++..++.+.+. ++..++.
T Consensus 311 ----~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 311 ----NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG 361 (412)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence 5677888889999999999999999999999999999988775 4444443
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.2e-18 Score=168.81 Aligned_cols=311 Identities=15% Similarity=0.107 Sum_probs=198.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 014905 72 GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLV 150 (416)
Q Consensus 72 ~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i 150 (416)
.+.+++.+...++..+++++.|+++|++|||+.++++.+.+.++.+ .++++|+++++++|++.|+|.|......+. ++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~pi-y~ 167 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPV-YI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchh-hH
Confidence 3559999999999999999999999999999999999999999999 999999999999999999999999988888 99
Q ss_pred hhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc
Q 014905 151 AEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPE 227 (416)
Q Consensus 151 ~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (416)
+|. +.||...+..+.....|..+|. .++...... . ++||..+.+..+.+++..+. ..+.||+|+...
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~~----~~~~~~~~~--~---~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~ 237 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLGY----CINYGTSKV--Y---AGWRIPLGLALIPAVILALG-MLFLPESPRWLI 237 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHHH----HHhhhhccC--C---ccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHH
Confidence 988 5677764444343333333322 333222211 1 28999999988888888877 557888775210
Q ss_pred c----h---------------hhH---HHhh------------h-HHHhhhc--chh-HHHHHHHHHHHHHHHHHHHHhh
Q 014905 228 K----K---------------NLL---AQFK------------G-AALAIAS--DER-IALLGAIQSLFEGSMYTFVFLW 269 (416)
Q Consensus 228 ~----~---------------~~~---~~~~------------~-~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (416)
+ + +.+ +..+ + ..+++++ .++ .........+.+...+.....|
T Consensus 238 ~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y 317 (513)
T KOG0254|consen 238 EKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYY 317 (513)
T ss_pred HcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEee
Confidence 0 0 000 0000 0 1222222 122 2223344444455554544546
Q ss_pred hcccccCCCCCch-HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCccc
Q 014905 270 TPALSPNDEEIPH-GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISL 348 (416)
Q Consensus 270 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (416)
.+.+++.....+. .......++...++..+...+.|| .++|+.++.+.....++..+.................
T Consensus 318 ~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~--~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~--- 392 (513)
T KOG0254|consen 318 STTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDR--FGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKG--- 392 (513)
T ss_pred hHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc---
Confidence 6666555322222 333444466777777778899999 7777777776666665555444333211000000000
Q ss_pred chhHHHHHHHHHHHhhhc-chhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 349 SGSLQLIGFSTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
..+..+...+++-..++. ..|..+.+.+|.+|.+.|+++.++........
T Consensus 393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 234444444444444444 55777788999999999999988776544443
No 93
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.83 E-value=6e-19 Score=165.90 Aligned_cols=237 Identities=13% Similarity=0.072 Sum_probs=179.9
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFS 143 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (416)
++.+....+.+.+.++++++++++.+++|.+.||++-.+.+....+...+-.+ ....+|++.+++.|++.|+..+..+|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccch
Confidence 67888889999999999999999999999999999988888777776666554 55688999999999999999999999
Q ss_pred hhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcc
Q 014905 144 AFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWT 220 (416)
Q Consensus 144 ~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 220 (416)
+... +++.+ ++|+...++.....++|..+|+ +++..+-..-......|||+.|++.+++.++..+..++..|
T Consensus 154 ~~~~-~lg~wy~~~e~g~r~~~~~a~~~~g~i~gg----liA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 154 GVVA-ILGNWYGKSERGLRMGIWYASASLGNIFGG----LIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred HHHH-HHHhhcChhhhhhhHHHHHHhcchhhHHHH----HHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 9998 88866 7778875555444444444433 33332211000011139999999999999999988887788
Q ss_pred cCCCCc---cchh-------hH---------HHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC-
Q 014905 221 ENYGDP---EKKN-------LL---------AQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI- 280 (416)
Q Consensus 221 ~~~~~~---~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 280 (416)
++|.+. +++| .+ +.++..+++.+++|++|...+..++.....+.+.+ |.|.+.++..+.
T Consensus 229 ~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~-~lpl~l~~~~~~s 307 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSY-WLPLYLKSNGGYS 307 (495)
T ss_pred CChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHH-HHHHHHHcCCCcC
Confidence 877632 1111 01 01234677888999999999999998888888666 999999984444
Q ss_pred --chHHHHHHHHHHHHHhhHHHHHHhhcc
Q 014905 281 --PHGFIFATFMLASMLGSSFASRLLAHS 307 (416)
Q Consensus 281 --~~g~~~~~~~~~~~~~~~~~~~l~~r~ 307 (416)
+.+.+.....++.+++.++.+.++||.
T Consensus 308 ~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 308 ELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred hHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 367777778999999999999999993
No 94
>PRK09669 putative symporter YagG; Provisional
Probab=99.82 E-value=1e-17 Score=159.79 Aligned_cols=305 Identities=13% Similarity=0.118 Sum_probs=184.3
Q ss_pred HhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh----hCchHHHH-HHHHHHHhhhh-hccch----
Q 014905 54 WLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK----QGRKRACV-TYCITYMLSCV-TKHSS---- 122 (416)
Q Consensus 54 ~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr----~Grr~~l~-~~~~~~~~~~l-~~~~~---- 122 (416)
.....++...| +++|+|+.++|.+.++..+...+..|+.|.++|| +||||..+ .+.+..++... ....+
T Consensus 26 ~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~ 105 (444)
T PRK09669 26 QTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGA 105 (444)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCc
Confidence 34455664555 7999999999999999999999999999999998 78765544 45455544443 22222
Q ss_pred --hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-hhcc
Q 014905 123 --EYKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD-TLAL 195 (416)
Q Consensus 123 --~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-~~~~ 195 (416)
..+.+++..++.+.+......+..+ +.+|. ++|.+..++. ..+..+|..++..+.+.+.....+ ....
T Consensus 106 ~~~~~~~~~~~~l~~~~~t~~~ip~~a-l~~~~t~~~~eR~~l~~~r----~~~~~~G~~i~~~~~~pl~~~~~~~~~~~ 180 (444)
T PRK09669 106 TGKIIYACVTYILLSLVYTAINVPYCA-MPGAITNDPRERHSLQSWR----FALSFIGGLIVSVIALPLVDILGKGDEQK 180 (444)
T ss_pred chHHHHHHHHHHHHHHHHHhhcchHHH-hHHHhcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 3466666677777766666666666 76654 5565543333 333334443333433333333211 0012
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
+|+..+.+.+++..+..+......+|++++++++ +.+.+++.++++|||.++.+.....+.......... ..+.|.+
T Consensus 181 g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~--~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~ 257 (444)
T PRK09669 181 GYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDN--SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG-ATLYYVN 257 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcC--CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-hhheeee
Confidence 7888888887777766665554555543322211 223456778889998877775554444333322111 3344444
Q ss_pred CCCCCc--hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHH
Q 014905 276 NDEEIP--HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQ 353 (416)
Q Consensus 276 ~~~~~~--~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (416)
+..+.+ .+.......+..+++.++.+++.|| .++++....+.....+.......... + +.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~~~~~---~----------~~~~~ 322 (444)
T PRK09669 258 YVLLRPDLATLFLVTGMIAGLFGALLSERLLGK--FDRVRAFKWTIVAFVILSALIFFIPP---S----------NVWLI 322 (444)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhCc---c----------hHHHH
Confidence 433222 3344444567778888899999999 77777666655444322222222211 0 44556
Q ss_pred HHHHHHHHHhhhcchhHHHHHHhccCCc
Q 014905 354 LIGFSTFEACVGIFWPSIMKMRSQYIPE 381 (416)
Q Consensus 354 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~ 381 (416)
.+..++.+++.+...+..+++++|.+|.
T Consensus 323 ~~~~~i~g~~~~~~~~~~~am~ad~~d~ 350 (444)
T PRK09669 323 FALNILFNFIQNLTTPLQWSMFSDVVDY 350 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 6667788888898999999999998873
No 95
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.8e-18 Score=164.37 Aligned_cols=310 Identities=14% Similarity=0.136 Sum_probs=231.0
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH-HHHHHhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG-RIFGGIATSLLF 142 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~-r~l~G~~~~~~~ 142 (416)
++++.+.++++|+.++......+..|+.+.+.||+|.|++.+.+.++..++.+ ..+++++|++++. -++.|+|.+..+
T Consensus 74 ~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~ 153 (509)
T KOG2504|consen 74 DYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIY 153 (509)
T ss_pred HHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhh
Confidence 89999999999999999999999999999999999999999999999999999 8999999888776 488999999999
Q ss_pred hhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcc
Q 014905 143 SAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWT 220 (416)
Q Consensus 143 ~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 220 (416)
.+... .+..+ +||+.++++. ..|.+++..+-|.+...+.+.+ |||..+++.+.+.+-..+......|
T Consensus 154 ~paiv-iv~~YF~kkR~lA~Gia--------~~GsG~G~~~~~~l~~~l~~~~--G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 154 LPAVV-ILGTYFEKKRALATGIA--------VSGTGVGTVVFPPLLKYLLSKY--GWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred cchhh-hhhhHhHHHHHHHHhhh--------hccCCcceeeHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 98888 88877 7888885544 3445555588888888888887 9999999988888666666654555
Q ss_pred cCCCC-----------------------------c--cch-------hhH------H--HhhhHH----HhhhcchhHHH
Q 014905 221 ENYGD-----------------------------P--EKK-------NLL------A--QFKGAA----LAIASDERIAL 250 (416)
Q Consensus 221 ~~~~~-----------------------------~--~~~-------~~~------~--~~~~~~----~~~~~~~~~~~ 250 (416)
..+.. + ..+ +.+ + ..+... .++++++.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~ 302 (509)
T KOG2504|consen 223 LSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLL 302 (509)
T ss_pred CCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHH
Confidence 11110 0 000 000 0 111122 46788888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCC--CchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHH--HHHHHHHHH
Q 014905 251 LGAIQSLFEGSMYTFVFLWTPALSPNDEE--IPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQI--VFIISSASL 326 (416)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~--~~~~~~~~~ 326 (416)
+.+...+...+.+.... ++|.|..+... .+.+...+..++..++++++.|++.|+ ...++.... .....++..
T Consensus 303 ~~~~~~~~~~g~~~p~~-~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~--~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 303 LALSNLFAYLGFNVPFV-YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK--PGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc--cccchHHHHHHHHHHHHHHH
Confidence 87777777777777555 88888875321 137888899999999999999999999 443333322 222223222
Q ss_pred HHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeeee
Q 014905 327 LIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVL 403 (416)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~~ 403 (416)
....... +.+.......++|+..|...........|+++.++-..++|+..+...++++++-
T Consensus 380 ~~~p~~~---------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 380 LFLPFAT---------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred HHHHHhc---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 2222222 4566777778888988888888888899999999999999998887777665543
No 96
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.82 E-value=2.1e-19 Score=170.52 Aligned_cols=322 Identities=16% Similarity=0.121 Sum_probs=219.2
Q ss_pred HHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh----hhCchHHHH-HHHHHHHhhhh-hccc-h-----
Q 014905 56 QGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD----KQGRKRACV-TYCITYMLSCV-TKHS-S----- 122 (416)
Q Consensus 56 ~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D----r~Grr~~l~-~~~~~~~~~~l-~~~~-~----- 122 (416)
...++.+.| +..|+++..+|.+..+..+..++..|+.|.++| |+||||..+ ++....+++.. .... +
T Consensus 20 ~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~ 99 (428)
T PF13347_consen 20 LSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSF 99 (428)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhh
Confidence 333554556 788999999999999999999999999999999 899877655 56666666666 4433 3
Q ss_pred --hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-c
Q 014905 123 --EYKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA-L 195 (416)
Q Consensus 123 --~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~-~ 195 (416)
....+.+..++..++......+..+ +.+|. ++|.+.. .....+..+|..+...+.+.+.....+... .
T Consensus 100 ~~~~~~~~~~~~l~~~~~t~~~i~~~a-l~~~lt~~~~~R~~l~----~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~ 174 (428)
T PF13347_consen 100 TAKLVWLFVFYILFDIAYTFVQIPYNA-LIPELTPDPDERTRLS----SWRMIFSMIGSLLASFLAPILVSWFGGGDTSN 174 (428)
T ss_pred hhHHHHHHHHHHHHHHhhhhccCchhh-cCccccccHhhhhhHH----HHHHHHHHHHHHHHHHHhhhhhhhhccCccch
Confidence 2344566677778888887777777 76655 5566653 333444444453333444444333322111 1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
+|+....+.+++.++..+...+..||++++.++++.+.+.++.+++++|||++..+.....+.......... ..+.|.+
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~-~~~y~~~ 253 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNT-FLPYYFT 253 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhh-HHHHHHH
Confidence 689998888888888888777677773333333333444566788899998888776666665544444232 4555555
Q ss_pred CCCCCc--hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHH
Q 014905 276 NDEEIP--HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQ 353 (416)
Q Consensus 276 ~~~~~~--~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (416)
+..+.+ .+.......++.+++.++.+++.|| .+++|....+..+.........+.... +.+..
T Consensus 254 ~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r--~gk~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 318 (428)
T PF13347_consen 254 YVLGNEGLISIFMLIFFVASIVGSPLWGRLSKR--FGKKKVYIIGLLLAALGFLLLFFLGPG-------------SPWLV 318 (428)
T ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHH--ccceeehhhhHHHHHHHHHHHHHHHhh-------------hHHHH
Confidence 543332 5666667788899999999999999 888888888777777666555555410 56778
Q ss_pred HHHHHHHHHhhhcchhHHHHHHhccCCcc-------ccceeeeeeeccccee
Q 014905 354 LIGFSTFEACVGIFWPSIMKMRSQYIPEE-------ARSTIMNFFRIPLNVF 398 (416)
Q Consensus 354 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~rg~~~g~~~~~~~~~ 398 (416)
++...+.+++.+..+....++.+|..+.+ ..|..+|+.+....+.
T Consensus 319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 88888999999999999999999998843 3456666665554443
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.82 E-value=3.9e-17 Score=153.44 Aligned_cols=338 Identities=15% Similarity=0.130 Sum_probs=203.9
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh----hhCchHHHHHH-HHHHHhhhh-hccc
Q 014905 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD----KQGRKRACVTY-CITYMLSCV-TKHS 121 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D----r~Grr~~l~~~-~~~~~~~~l-~~~~ 121 (416)
-..++.....+++.|..+++|.++.+.+++..+..+...+.+|+.|+++| |+||||.++.. .....++.+ ..++
T Consensus 15 Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~ 94 (477)
T TIGR01301 15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 44667778888885534999999999999999999999999999999999 59999998875 444444444 4454
Q ss_pred hhH-----------------HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---ccc--CcchhhHHHHHHHHHHHHhhHHH
Q 014905 122 SEY-----------------KILMLGRIFGGIATSLLFSAFESWLVAEH---NKR--GFDQQWLSETFSKAIFLGNGLVA 179 (416)
Q Consensus 122 ~~~-----------------~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r--~~~~~~~~~~~~~~~~~G~~~~~ 179 (416)
++. +..+++-.+..++.....++..+ +++|. ++| +.+.++.+...++|..+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rA-LiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~---- 169 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRA-FLADLTGGDARRTRIANAYFSFFMAIGNVLGY---- 169 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccCchhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 443 22333334445577777777777 88876 222 3454444444444444444
Q ss_pred HHHHHHHHHH--Hhh-----------hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccch----h---h-HHHhhhH
Q 014905 180 IISGLFGNLL--VDT-----------LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKK----N---L-LAQFKGA 238 (416)
Q Consensus 180 ~~~~~l~~~~--~~~-----------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~-~~~~~~~ 238 (416)
.+++.. .+. ...+.|..|++.++..++.........||.+..++++ + . +.+.+..
T Consensus 170 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (477)
T TIGR01301 170 ----AAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAF 245 (477)
T ss_pred ----HHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhh
Confidence 333322 110 0125688999999888888888776777764311110 0 0 1111222
Q ss_pred HHhhhc---c--hhHHHHHHHHHHHHHHHHHHHHhhhcccccC-CCC--------CchH-----HHHHHHHHHHHHhhHH
Q 014905 239 ALAIAS---D--ERIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEE--------IPHG-----FIFATFMLASMLGSSF 299 (416)
Q Consensus 239 ~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~g-----~~~~~~~~~~~~~~~~ 299 (416)
++++++ + |..+.++...++...+.+.+.. |.+.+..+ ..+ .+.| +......+...+.+++
T Consensus 246 ~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~-y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~ 324 (477)
T TIGR01301 246 FGELFGAFKYLPRPVWILLLVTCLNWIAWFPFIL-FDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIG 324 (477)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 2 5667777788888888887776 55544332 111 1112 2223335555577788
Q ss_pred HHHHhhcccccchhHH-HHHHHHHHHHHHHHHHhhccCCC--C-CCCCCCccc---chhHHHHHHHHHHHhhhcchhHHH
Q 014905 300 ASRLLAHSSLRVESYM-QIVFIISSASLLIPILTNFLETP--P-DVRGGGISL---SGSLQLIGFSTFEACVGIFWPSIM 372 (416)
Q Consensus 300 ~~~l~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~---~~~~~~~~~~l~~~~~g~~~~~~~ 372 (416)
..++.+| .+.+|.. ..+..+.+.++....+.....++ + +..+..+.. ..+..+..+.+.|+..+..+...+
T Consensus 325 l~~l~~~--~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPf 402 (477)
T TIGR01301 325 MEKLCRG--WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPF 402 (477)
T ss_pred HHHHHHH--hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhH
Confidence 8999998 6654444 45444444444444333211000 0 000000000 135677778888999999999999
Q ss_pred HHHhccCCcc--ccceeeeeeecccce
Q 014905 373 KMRSQYIPEE--ARSTIMNFFRIPLNV 397 (416)
Q Consensus 373 ~~~~~~~p~~--~rg~~~g~~~~~~~~ 397 (416)
+++++..|++ .+|..+|+.|....+
T Consensus 403 al~s~~~~~~~~~~G~~mgilN~~I~l 429 (477)
T TIGR01301 403 ALASIRSSNLGAGQGLSMGVLNLAIVI 429 (477)
T ss_pred HHHHHHccccCCCCcchhhHHHHHHHH
Confidence 9999999954 447888887765443
No 98
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=6.2e-18 Score=147.82 Aligned_cols=305 Identities=14% Similarity=0.122 Sum_probs=178.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhh
Q 014905 68 GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFE 146 (416)
Q Consensus 68 ~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (416)
+.+..-.|.+.+.+.+.+.+.++.+|.++||+|||.++.++++..++..+ .+.+.|+..+.++|++.|+..+.... ..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v-~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSV-IR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHH-HH
Confidence 33445669999999999999999999999999999999999999999888 89999997777779999999987654 45
Q ss_pred hhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH----HHHHHHHHHHHHHHhc
Q 014905 147 SWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA----AACFLAFGMVIILASW 219 (416)
Q Consensus 147 ~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~----~~~~~~~~~~~~~~~~ 219 (416)
+ +++|. ++|+...+.++..+++|..+|+ ++|..+..+. +. .-+.+|.. ..+..........++.
T Consensus 143 A-iisdV~sek~r~l~ms~v~~a~~lGfilGP----mIGgyla~f~-~~---~g~~p~alP~~~v~i~a~~~v~~~~~~l 213 (451)
T KOG2615|consen 143 A-IISDVVSEKYRPLGMSLVGTAFGLGFILGP----MIGGYLAQFS-SI---SGSYPFALPCLLVFILAAGDVTFFPWFL 213 (451)
T ss_pred H-HHHhhcChhhccceeeeeehhhhcchhhcc----hhhhHHHhhH-hh---hccCchHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 88877 7788887777777766666655 4444443322 12 11223322 2222222122333356
Q ss_pred ccCCCCccchh----h---HHHhhh--HHH-----hhhcchhHHHH------HHHHHHHHHHHHHHHHhhhcccccCCCC
Q 014905 220 TENYGDPEKKN----L---LAQFKG--AAL-----AIASDERIALL------GAIQSLFEGSMYTFVFLWTPALSPNDEE 279 (416)
Q Consensus 220 ~~~~~~~~~~~----~---~~~~~~--~~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (416)
||+-+.+++++ . .++.++ ... ...||++.... ....-+...-.+....+..+.+.....+
T Consensus 214 pETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg 293 (451)
T KOG2615|consen 214 PETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFG 293 (451)
T ss_pred CccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccC
Confidence 66533222110 0 000000 011 12344222211 1111111112222122122333233344
Q ss_pred C---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHH
Q 014905 280 I---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIG 356 (416)
Q Consensus 280 ~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (416)
. +.|.+++..++.+.+......+..+|. .+..+....-......-.++...... ........
T Consensus 294 ~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~-~~~~~a~l~~~l~~~vP~~llls~~~--------------~~~~l~~~ 358 (451)
T KOG2615|consen 294 YSSMQQGKVLSTTGLLMLVIQLALVPILPRY-KGNIKAVLLFSLLLIVPAFLLLSLAR--------------TPVVLYLG 358 (451)
T ss_pred CChhhheeeeehhhHHHHHHHHhcccccccc-ccchhhHHHHHHHHHHHHHHHHhccc--------------cchhhhHH
Confidence 4 377788777887777777777777773 22222222222222212221111111 22345666
Q ss_pred HHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 357 FSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 357 ~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
..+..+......+....++.+..|+++||+..|+.+....+
T Consensus 359 s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al 399 (451)
T KOG2615|consen 359 STLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGAL 399 (451)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence 77777887888899999999999999999999988765544
No 99
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.81 E-value=1.2e-17 Score=160.22 Aligned_cols=315 Identities=13% Similarity=0.093 Sum_probs=188.5
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh----hhCchH-HHHHHHHHHHhhhh-hcc
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD----KQGRKR-ACVTYCITYMLSCV-TKH 120 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D----r~Grr~-~l~~~~~~~~~~~l-~~~ 120 (416)
..........+++...| +.+|+|+.++|.+..+..+..++..|+.|.++| |+|||| .++.+....+++.. ...
T Consensus 17 ~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~ 96 (473)
T PRK10429 17 GKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFS 96 (473)
T ss_pred HHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHc
Confidence 34455566777874444 678999999999999999999999999999999 669855 45556666666544 322
Q ss_pred ch------hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHH-HHHHHHHH
Q 014905 121 SS------EYKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAII-SGLFGNLL 189 (416)
Q Consensus 121 ~~------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~-~~~l~~~~ 189 (416)
.+ .+..+++..++.+++......+..+ +.+|. ++|.+..++. ..+..+|..+...+ .|.+ ...
T Consensus 97 ~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a-l~~~lt~~~~eR~~l~~~~----~~~~~ig~~~~~~~~~~~~-~~~ 170 (473)
T PRK10429 97 AHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWS-LVPTLTLDKREREQLVPYP----RFFASLAGFVTAGFTLPFV-NYV 170 (473)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHcchHHh-hhHHhCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH-HHh
Confidence 22 2345566666777777777666666 66643 6666654332 22222222121122 2222 111
Q ss_pred Hh-hhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc---chhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHH
Q 014905 190 VD-TLALGPVAPFDAAACFLAFGMVIILASWTENYGDPE---KKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTF 265 (416)
Q Consensus 190 ~~-~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (416)
.+ ....+|+....+.+++.++..+...+..||++++++ +++.+.+.++.++.+++||.++.+.....+.....+..
T Consensus 171 g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 171 GGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 10 000156666666666666655555544666532211 11112234556667778888777766665555555543
Q ss_pred HHhhhcccccCCCCCc--hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014905 266 VFLWTPALSPNDEEIP--HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRG 343 (416)
Q Consensus 266 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (416)
.. +.+.|.++..+.+ .+.......++.+++.++.+++.|| +++++.+..+..+..+.............+
T Consensus 251 ~~-~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r--~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~----- 322 (473)
T PRK10429 251 NG-FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS--LSRRILWAGASIFPVLSCGVLLLMGLAAPH----- 322 (473)
T ss_pred hh-heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHHHHHHHHHHHHHHHHHHHHHhccCch-----
Confidence 33 5566665543322 4455555568888999999999999 888877766555433332222221100000
Q ss_pred CCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCc
Q 014905 344 GGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPE 381 (416)
Q Consensus 344 ~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~ 381 (416)
+.+...+...+.+++.+..++...++++|.+|.
T Consensus 323 -----~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 323 -----NALLIVIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 345555666677788888888889999999773
No 100
>PRK09848 glucuronide transporter; Provisional
Probab=99.80 E-value=4e-17 Score=155.89 Aligned_cols=330 Identities=12% Similarity=0.032 Sum_probs=193.6
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh----CchHHH-HHHHHHHHhhhh-h--
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ----GRKRAC-VTYCITYMLSCV-T-- 118 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~----Grr~~l-~~~~~~~~~~~l-~-- 118 (416)
.......+..+++.+.+ +..|+++.++|.+.+...+...+..++.|+++||. ||||.. ..+.+...+... .
T Consensus 19 ~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~ 98 (448)
T PRK09848 19 ANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFW 98 (448)
T ss_pred HhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHh
Confidence 44555566777884433 57899999999999999999999999999999996 777755 444333332222 1
Q ss_pred ---ccch--hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHH-HhhHHHHHHHHHHHH
Q 014905 119 ---KHSS--EYKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFL-GNGLVAIISGLFGNL 188 (416)
Q Consensus 119 ---~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~-G~~~~~~~~~~l~~~ 188 (416)
...+ ..+..+....+.+++.+...++..+ +..|. ++|.+.. .....+..+ +..++..++|.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~r~~~~----~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 99 VPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGS-LATAMTQQPQSRARLG----AARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred CcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhh-hhhhhcCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 2334455556777777777766555 54432 5555442 222222222 122333455555442
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 014905 189 LVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFL 268 (416)
Q Consensus 189 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
..+....+|.....+.+++..+..+......||+++++++ +...++.+++++|||.++.......+..........
T Consensus 174 ~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~- 249 (448)
T PRK09848 174 SPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA---QPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSA- 249 (448)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc---CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-
Confidence 2110000111111222333333333333334555332211 123345678899999988876666666655555444
Q ss_pred hhcccccCCCCCc--hHHH-HHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 014905 269 WTPALSPNDEEIP--HGFI-FATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGG 345 (416)
Q Consensus 269 ~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (416)
+.|.|.++..+.+ .+.. .....++.+++.++.+++.|| .+.++.+..+..+..+.......... .
T Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r--~g~~~~~~~g~~~~~i~~~~~~~~~~---------~- 317 (448)
T PRK09848 250 SSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR--IGKKNTFLIGALLGTCGYLLFFWVSV---------W- 317 (448)
T ss_pred hheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHcCc---------h-
Confidence 6787887765553 2322 333356677889999999999 78888777776655544433332221 0
Q ss_pred cccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCcc-------ccceeeeeeecccceeeee
Q 014905 346 ISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEE-------ARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 346 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~rg~~~g~~~~~~~~~~~~ 401 (416)
+.+.......+.+++.+...+...++.+|..|++ .+|..+|+.+....+...+
T Consensus 318 ---~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 318 ---SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 3455555667778888888888899998888754 3477778777666554433
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.78 E-value=6.3e-16 Score=145.91 Aligned_cols=327 Identities=17% Similarity=0.113 Sum_probs=190.0
Q ss_pred HHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh-CchHHHHHHHHHHHhhhh-hccch-
Q 014905 48 LMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ-GRKRACVTYCITYMLSCV-TKHSS- 122 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~l-~~~~~- 122 (416)
....+.+....++ |.| +++|+|+.+.+.+.+.+.....++.+++|+++||+ ||||+++++.+...++.+ ....+
T Consensus 20 ~e~fs~Yg~~~~L-~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~ 98 (493)
T PRK15462 20 WEYFSFYGMRALL-ILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI 98 (493)
T ss_pred HHHHHHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444555555566 666 57899999999999999999999999999999999 999999999888888766 44332
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCc
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH-----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGP 197 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w 197 (416)
+...+.++..+..++.|...+...+ +++|. ++|+.. . +....+..+|. .++|.+.+++.+.. ||
T Consensus 99 ~~~~~~l~l~li~iG~G~~~~~~~a-lv~elfp~~~~~R~sg---f-~i~Y~~~nlG~----~iap~l~g~L~~~~--Gw 167 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGLFKSNVSC-LLGELYEPTDPRRDGG---F-SLMYAAGNVGS----IIAPIACGYAQEEY--SW 167 (493)
T ss_pred chhHHHHHHHHHHHhcccccccHHH-HHHHHCCCCCccccce---e-hHHHHHHHHHH----HHHHHHHHHHHhhh--Ch
Confidence 2233444444444556665565566 77765 145554 3 22222222445 88888888888776 99
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc---ccCCC-CccchhhHHHh----------------------hhHH------------
Q 014905 198 VAPFDAAACFLAFGMVIILASW---TENYG-DPEKKNLLAQF----------------------KGAA------------ 239 (416)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~----------------------~~~~------------ 239 (416)
+..|.+.++..++..+...... ++... ++++.+.++.. .+..
T Consensus 168 ~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIG 247 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987765555444433221 11100 01110000000 0000
Q ss_pred ---------Hhhhc-ch-hHHHHHHHHHHHHHHH---HHHHHhhhcccccCC-------CCCchHHHHHHHHHHHHHhhH
Q 014905 240 ---------LAIAS-DE-RIALLGAIQSLFEGSM---YTFVFLWTPALSPND-------EEIPHGFIFATFMLASMLGSS 298 (416)
Q Consensus 240 ---------~~~~~-~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ 298 (416)
++.-+ +| |.... +..+.....+ |-....-...|.+++ .+.+.+...+...+..++.++
T Consensus 248 ~~~~~~~~~~~~~~~er~r~~~~-~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P 326 (493)
T PRK15462 248 LGVLAKIYRKAENQKQRKELGLI-VTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGV 326 (493)
T ss_pred HHHHHHHHHhcCCHHHHhhHHHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHH
Confidence 01000 12 22222 1112111111 111111222233222 123577777777777777777
Q ss_pred HHHHHhhcc-----cccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHH
Q 014905 299 FASRLLAHS-----SLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMK 373 (416)
Q Consensus 299 ~~~~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~ 373 (416)
+..++-.|. +.+..++..++..+.++.+.++........+ ++.. +.++.+....+.+++.-...|+..+
T Consensus 327 ~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~----~~~~--s~~wl~~~~~~~t~gEl~~sPvgls 400 (493)
T PRK15462 327 FLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAM----YGHS--SLPLMVLGLAVMGFAELFIDPVAMS 400 (493)
T ss_pred HHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC----CCCc--CHHHHHHHHHHHHHHHHHHChHHHH
Confidence 666553332 1123335666666666665555432221111 1111 5566777788888888889999999
Q ss_pred HHhccCCccccceeeeeeec
Q 014905 374 MRSQYIPEEARSTIMNFFRI 393 (416)
Q Consensus 374 ~~~~~~p~~~rg~~~g~~~~ 393 (416)
.++++.|++.||+.+|+...
T Consensus 401 ~~~~laP~~~~g~~mg~w~l 420 (493)
T PRK15462 401 QITRIEIPGVTGVLTGIYML 420 (493)
T ss_pred HHHHhChHHHHHHHHHHHHH
Confidence 99999999999999998744
No 102
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.78 E-value=1.1e-16 Score=152.51 Aligned_cols=315 Identities=13% Similarity=0.055 Sum_probs=194.8
Q ss_pred HHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhh
Q 014905 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 64 ~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (416)
++++|-+ ....|+.+...++..+..++.|+++|.||||..++.+.++..+|.+ .+.++|...++.+..+.|+|.|...
T Consensus 71 ~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~ 149 (599)
T PF06609_consen 71 NADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE 149 (599)
T ss_pred HHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH
Confidence 3788775 6677888899999999999999999999999999999999999999 9999999999999999999987665
Q ss_pred hhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh-cc
Q 014905 143 SAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILAS-WT 220 (416)
Q Consensus 143 ~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~-~~ 220 (416)
. ... .++|. .+|.+..+ . ...... ..+....++.++..+.... +|||.|++..+...+.+++..++ .|
T Consensus 150 ~-~~~-~isEl~p~k~R~~~-~-~~~~~~----~i~~~~~~~~ia~~~~~~~--~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 150 L-AAL-AISELVPNKWRGLG-L-AIASIP----FIITTWISPLIAQLFAAHS--GWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred H-HHH-HHHHhcccchhhhH-h-HHHHHH----HHhhhcccHHHHHHhccCC--CcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 4 333 45666 33333211 1 111111 2122245666666555443 89999999988777766555444 33
Q ss_pred cCCCCc---c--chh-hHH-----------------------------------------------------H---hhhH
Q 014905 221 ENYGDP---E--KKN-LLA-----------------------------------------------------Q---FKGA 238 (416)
Q Consensus 221 ~~~~~~---~--~~~-~~~-----------------------------------------------------~---~~~~ 238 (416)
+++++. + +++ .++ . .+++
T Consensus 220 P~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~P 299 (599)
T PF06609_consen 220 PPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDP 299 (599)
T ss_pred CchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCC
Confidence 332111 0 111 000 0 0001
Q ss_pred --HHhhhcchhHHHH-HHHHHHHHHHHHHHHHhhhcccccCCC--CC----chHHHHHHHHHHHHHhhHHHHHHhhcccc
Q 014905 239 --ALAIASDERIALL-GAIQSLFEGSMYTFVFLWTPALSPNDE--EI----PHGFIFATFMLASMLGSSFASRLLAHSSL 309 (416)
Q Consensus 239 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~g~~~~~~~~~~~~~~~~~~~l~~r~~~ 309 (416)
-.+++|++|.+.. .+..++....++.... +.|....... +. ..+........+...+..+.+.+.++ .
T Consensus 300 l~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~-l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~--i 376 (599)
T PF06609_consen 300 LFPHRLFKDRRGFAALLVISFISGMNFFSVNI-LWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK--I 376 (599)
T ss_pred cCCHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH--c
Confidence 1235566444433 3333333444444333 4444333221 11 25666667788888888888988887 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeee
Q 014905 310 RVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 389 (416)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g 389 (416)
+..|..++........+......... + |....+...++.+++.|..........+-..|++.-|++.|
T Consensus 377 r~~Kw~li~~~~~~ta~~Gama~~~~--~----------n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~g 444 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFCGAMAAVRP--D----------NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATG 444 (599)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHccC--C----------CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHH
Confidence 55555543333333232222222211 1 22234556667778888877777788888899999999999
Q ss_pred eeecccceeeeeeee
Q 014905 390 FFRIPLNVFVCIVLY 404 (416)
Q Consensus 390 ~~~~~~~~~~~~~~~ 404 (416)
+.-..+.+++.++..
T Consensus 445 L~~s~R~~GGsIg~a 459 (599)
T PF06609_consen 445 LTGSIRSIGGSIGYA 459 (599)
T ss_pred HHHHHHHHhhHHHHH
Confidence 887777666555443
No 103
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.77 E-value=6.2e-16 Score=142.35 Aligned_cols=310 Identities=15% Similarity=0.139 Sum_probs=214.0
Q ss_pred HHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh----hhCchHHHHH-HHHHHHhhhh-hccch-
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD----KQGRKRACVT-YCITYMLSCV-TKHSS- 122 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D----r~Grr~~l~~-~~~~~~~~~l-~~~~~- 122 (416)
........++.-.| +..|+|+..+|.++.+.-+-.++..|+.|.++| |+||+|..+. +.+..++... +..++
T Consensus 26 ~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~ 105 (467)
T COG2211 26 FAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD 105 (467)
T ss_pred HHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC
Confidence 44445555663445 789999999999999999999999999999999 4887776554 4455555444 33443
Q ss_pred -----hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-
Q 014905 123 -----EYKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT- 192 (416)
Q Consensus 123 -----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~- 192 (416)
+....++...+.+++......+..+ +.+|. ++|.+..++- ..+..+|..+...+.+++.....+.
T Consensus 106 ~~~~~k~~ya~vtY~l~~l~YT~vniPy~a-l~~~iT~d~~ER~~l~s~R----~~~~~~g~~l~~~~~~plv~~~g~~~ 180 (467)
T COG2211 106 FSMTGKLIYALVTYMLLGLGYTLVNIPYGA-LGPEITQDPQERASLTSWR----MVFASLGGLLVAVLFPPLVKLFGGGD 180 (467)
T ss_pred cccCcchHHHHHHHHHHHHHHHheeCchhh-cchhhcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4566777788889988888777777 66644 7777764444 3444444433334444443333221
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchh--hHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhh
Q 014905 193 LALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKN--LLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWT 270 (416)
Q Consensus 193 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (416)
.+.||+..-.+.+++..+..+..++..+|++.+.++.+ .+++.++.+...++||..+..+....+.......... ..
T Consensus 181 ~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s-~~ 259 (467)
T COG2211 181 KALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGS-IM 259 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhh-hh
Confidence 13488888888888888888888877888775443222 3444555677788998888887755555544444333 66
Q ss_pred cccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcc
Q 014905 271 PALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGIS 347 (416)
Q Consensus 271 ~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (416)
..|.++..+.+ ..........+.+++.+..+++.+| +++++...++..+..+......+... +
T Consensus 260 ~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~--~gkk~~~~~~~~~~~i~~~~~~f~~~---~--------- 325 (467)
T COG2211 260 VYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK--FGKKKLFLIGLLLLAVGYLLLYFTPA---G--------- 325 (467)
T ss_pred heeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH--hchHHHHHHHHHHHHHHHHHHHhhcC---c---------
Confidence 66776655543 4555566677777779999999999 88888888887777766665555442 0
Q ss_pred cchhHHHHHHHHHHHhhhcchhHHHHHHhccCCc
Q 014905 348 LSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPE 381 (416)
Q Consensus 348 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~ 381 (416)
+.+..++..++.+++.+..++..+++++|.++.
T Consensus 326 -~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDy 358 (467)
T COG2211 326 -SVVLIVVALIIAGVGTGIANPLPWAMVADTVDY 358 (467)
T ss_pred -chHHHHHHHHHHHHHhhccccccHHHhcchhhH
Confidence 456667777888899999999999999998864
No 104
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.77 E-value=8.8e-16 Score=134.10 Aligned_cols=296 Identities=14% Similarity=0.141 Sum_probs=211.4
Q ss_pred hHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHH
Q 014905 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIF 133 (416)
Q Consensus 55 ~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l 133 (416)
-..|.++.+-+++|.|.+..|++.+...+...+.+++..+++.|+|.++.+..++++.+++.+ =... +.+.++.+-.+
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l 108 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLL 108 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHH
Confidence 455777333489999999999999999999999999999999999999999999999999888 3233 77889999999
Q ss_pred HHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFG 211 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~ 211 (416)
.|.+.+......++ .+.++ ++-+. +.+.|+.....|.++++.+.+.+.... .+||.....-+...++.
T Consensus 109 ~G~gIav~nVLLPs-lIK~~Fpk~~~~----mtglYs~sl~~~aaLaa~lavpla~~~-----~gW~~aL~~WAl~allA 178 (395)
T COG2807 109 AGAGIAVINVLLPS-LIKRDFPKRVGL----MTGLYSTSLGAGAALAAALAVPLAQHS-----GGWRGALGFWALLALLA 178 (395)
T ss_pred HHhhHHHHHHhhhH-HHHhhcccchhh----HHhHHHHHHHHHHHHHhhhhhHHHHhh-----ccHHHHHHHHHHHHHHH
Confidence 99999988887788 77765 33333 446666666666655556666655543 28999888888777776
Q ss_pred HHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC--CchHHHHHHH
Q 014905 212 MVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE--IPHGFIFATF 289 (416)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~ 289 (416)
++..+... .+++..+ .+....+...++|||..|.+.+...+.+...|.... |+|.++.|..- .+.|...+..
T Consensus 179 l~~WlPq~---~r~~~~~--~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~-WLP~ili~~G~sa~~aG~llsl~ 252 (395)
T COG2807 179 LLIWLPQA---LREQAAS--IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIG-WLPAILIDRGLSAAEAGSLLSLM 252 (395)
T ss_pred HHHHhhhc---ccccccc--cccccccccccccCchhHHHHHHHHhhHHHHHHHHH-HHHHHHHHcCCCHHHhhhHHHHH
Confidence 66554231 1111011 111222345689999999998888888888888555 99999987521 1388889999
Q ss_pred HHHHHHhhHHHHHHhhcccccchhHHHHH-HHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcch
Q 014905 290 MLASMLGSSFASRLLAHSSLRVESYMQIV-FIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFW 368 (416)
Q Consensus 290 ~~~~~~~~~~~~~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 368 (416)
.+..+..++..+.+.+| .+.+|.+... ..+..+...-..+.+. +. .+.-..+.|++.|..+
T Consensus 253 ~l~~~~~~ll~P~la~R--~~n~r~~~~~~~~~~l~G~~G~~~~P~--------------~~--~~lw~~llG~G~G~~F 314 (395)
T COG2807 253 QLAQLPTALLIPLLARR--SKNQRPLVVLALLLMLVGLVGLLLAPG--------------QL--PILWALLLGLGQGGAF 314 (395)
T ss_pred HHHHHHHHHHHHHHHHH--hcccchHHHHHHHHHHHHHHHHHHhhh--------------hH--HHHHHHHHhCccchHH
Confidence 99999999999999998 4444444443 3333333333333332 11 2222578889999999
Q ss_pred hHHHHHHhccCCccccc
Q 014905 369 PSIMKMRSQYIPEEARS 385 (416)
Q Consensus 369 ~~~~~~~~~~~p~~~rg 385 (416)
|...+.+....++.+++
T Consensus 315 ~laL~li~~rs~~a~~A 331 (395)
T COG2807 315 PLALTLILLRSSDAAIA 331 (395)
T ss_pred HHHHHHHHhhcCChHHH
Confidence 99888888777665543
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.76 E-value=1.6e-16 Score=151.62 Aligned_cols=335 Identities=13% Similarity=0.002 Sum_probs=204.6
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhC-----chHHHHHHHHHH-Hhhhh-hc
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQG-----RKRACVTYCITY-MLSCV-TK 119 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~G-----rr~~l~~~~~~~-~~~~l-~~ 119 (416)
..++. .+....+++.+ +++|+|+++++...+...++..+-.+ +|+++||++ ||+.++++.+.. .+... ..
T Consensus 37 ~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~ 114 (468)
T TIGR00788 37 VKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP 114 (468)
T ss_pred HhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc
Confidence 33344 33333343555 68999999999999999999988555 999999997 777777776555 34433 34
Q ss_pred cchhH-HHHHHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC
Q 014905 120 HSSEY-KILMLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG 196 (416)
Q Consensus 120 ~~~~~-~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~ 196 (416)
..++. ....+..++.+++.+....+..+ +..|. ++++...+..+..+.. ..+|. ++++.+++.+.+.+ +
T Consensus 115 ~~~~~~~~~~~~~~l~~~~~a~~dv~~da-~~~e~~~~~~~~~~~~~s~~~~~-~~~G~----~vg~~l~G~l~~~~--~ 186 (468)
T TIGR00788 115 GKVSSAKVAAAFIFLAALAKALYDVLVDS-LYSERIRESPSAGPSLVSWMWGA-SATGG----LISSLLGGPLLDKT--L 186 (468)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhHHH-HHhhhhhcCCCcCCCeeeHHHHH-HHHHH----HHHHHHHHHHHHhc--C
Confidence 34443 44444788999999999888888 88877 3333322222122221 22344 77778888888776 9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCCC---Cccchh--------------hHHHhhhHHHhhhcchhHHHHHHHHHH-H
Q 014905 197 PVAPFDAAACFLAFGMVIILASWTENYG---DPEKKN--------------LLAQFKGAALAIASDERIALLGAIQSL-F 258 (416)
Q Consensus 197 w~~~f~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 258 (416)
|+..|++.+.+.++..+.. .+.+|++. ++.+++ ..++...+.++.+++|.++......++ .
T Consensus 187 ~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~ 265 (468)
T TIGR00788 187 TRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSY 265 (468)
T ss_pred cchHHHHHHHHHHHHHHHH-HhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 9999999888877774433 35566431 111000 011112234455677777665443333 2
Q ss_pred HHHHHHHHHhhhcccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 014905 259 EGSMYTFVFLWTPALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFL 335 (416)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (416)
...... .. ..-.+.++..+. ..|......+++.+++....+++.+| .+.|+.+.+...+..............
T Consensus 266 ~~~~~~-~~-~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~--~~~r~~l~~~~~l~~~~~~~~~~l~~~ 341 (468)
T TIGR00788 266 ANLPGA-SG-SVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT--FPYRLLFGVTTLLYTLSSLFDLILVKR 341 (468)
T ss_pred hhcCCC-Cc-eeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh--CCHHHHHHHHHHHHHHHHhCceeeeec
Confidence 111111 00 000122223333 37888888899999999999999988 777777666666555443322111100
Q ss_pred CCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 336 ETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
.+. . .+ . .+.+.......+.++..+........++++..|++.+|+.+++.+...|+...++
T Consensus 342 ~~~-~--~g-i-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~ 403 (468)
T TIGR00788 342 WNL-A--FG-I-SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVS 403 (468)
T ss_pred ccc-c--cC-C-CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHH
Confidence 000 0 00 0 0123344556677788888888889999999999999999999888777765543
No 106
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=5.6e-17 Score=157.89 Aligned_cols=305 Identities=13% Similarity=0.059 Sum_probs=199.6
Q ss_pred HHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhh
Q 014905 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 64 ~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (416)
++..+.+.....+..+++.++.++|++++|+++||+|||++++.+++...++.+ .++++|++.+++.|++.|++.+...
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 356677888889999999999999999999999999999999999999999888 9999999999999999999999999
Q ss_pred hhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 014905 143 SAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASW 219 (416)
Q Consensus 143 ~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 219 (416)
..... ++.|. ++|+....+ ......++ .+++..++++.. +||+.+++..+...+..+. ++..
T Consensus 190 ~~~~~-~~~E~~~~~~R~~~~~~-----~~~~~~~~----~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~-~~l~ 254 (521)
T KOG0255|consen 190 TVGFG-LVAEIVSPKQRGLALTL-----GGFFFVGG----LMLPAGAAYITR----DWRWLFWIISIPSGLFLLL-WFLP 254 (521)
T ss_pred HHhHh-hheeecCcchhhHHHHH-----HHHHHHHH----HHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHH-HHcc
Confidence 98888 88888 667666222 22222333 455555555542 8999999998888877666 4356
Q ss_pred ccCCCCcc----chhh----HH-----------------H-hh-----------hHHHhhhcchhHHHHHHHHHHHHHHH
Q 014905 220 TENYGDPE----KKNL----LA-----------------Q-FK-----------GAALAIASDERIALLGAIQSLFEGSM 262 (416)
Q Consensus 220 ~~~~~~~~----~~~~----~~-----------------~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (416)
+|+++... .++. ++ . .. ..+.++++.++.....+...+.. ..
T Consensus 255 ~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~ 333 (521)
T KOG0255|consen 255 PESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FV 333 (521)
T ss_pred CcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HH
Confidence 67665210 0000 00 0 00 01222333333222222222222 11
Q ss_pred HHHHHhhhcccccCCCCCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 014905 263 YTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVR 342 (416)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (416)
+.... +.-.+.....+.+........+..........+...+| .+++...........+.++.........
T Consensus 334 ~~~~y-~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~--~gR~~~~~~~~~~~~~~~~~~~~~~~~~------ 404 (521)
T KOG0255|consen 334 FSLVY-YGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPE--FGRRPPLFLSLFLAGIGLLLFGWLPDDL------ 404 (521)
T ss_pred HhHHH-HhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHhhccc------
Confidence 11122 33333334445555566666666677777777888888 5555555555555555555555544310
Q ss_pred CCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceee
Q 014905 343 GGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 343 ~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~ 399 (416)
..+.......+..++.+..+...+.+..|.+|+..|+.+.+..+....+..
T Consensus 405 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~ 455 (521)
T KOG0255|consen 405 ------GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGS 455 (521)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 112345555555677777777779999999999999999988776555543
No 107
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=1.9e-16 Score=137.73 Aligned_cols=307 Identities=14% Similarity=0.091 Sum_probs=194.8
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhh
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~ 139 (416)
|.. +..|.+..|..++......+..+++..+|..+|++|||+...+......+... ...++|+..+.+.|.+.|+|.|
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~g 181 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVG 181 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCC
Confidence 444 57788889999999999999999999999999999999999999887777666 8899999999999999999999
Q ss_pred hhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 014905 140 LLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 140 ~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 216 (416)
+ .|...+ +-.|. .+|..-.-.. ..+ .+|. +....+.-....++ |||+..........+.+.+..
T Consensus 182 g-~pv~~~-~yle~lp~~~r~~~~V~~-~~w----aig~----v~ea~law~vm~~~--gwr~~l~~~~~pl~~~a~f~~ 248 (528)
T KOG0253|consen 182 G-LPVDSA-IYLEFLPSSHRWLLTVMS-FFW----AIGQ----VFEALLAWGVMSNF--GWRYLLFTSSTPLMFAARFLV 248 (528)
T ss_pred C-ccHhHH-HHHHhccCcCCCcchhHH-HHH----HHHH----HHHHHHHHHHHHhh--hHHHHHHHHHhHHHHHHHHHh
Confidence 8 666666 44444 4555542122 333 3334 55556666666666 888877777655555444443
Q ss_pred HhcccCCCCc-----cch--------------------------hhHH---------------HhhhHHHhhhcc--hhH
Q 014905 217 ASWTENYGDP-----EKK--------------------------NLLA---------------QFKGAALAIASD--ERI 248 (416)
Q Consensus 217 ~~~~~~~~~~-----~~~--------------------------~~~~---------------~~~~~~~~~~~~--~~~ 248 (416)
..+|+++-. +.+ +..+ +...+..+++.. |+.
T Consensus 249 -w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkt 327 (528)
T KOG0253|consen 249 -WVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKT 327 (528)
T ss_pred -hcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHH
Confidence 677776511 000 0000 001122233322 222
Q ss_pred HHHHHHHHHH-HHHHHHHHHhhhcccccCCC-------------------CC--chHHH-HHHHHHHHHHhhHHHHHHhh
Q 014905 249 ALLGAIQSLF-EGSMYTFVFLWTPALSPNDE-------------------EI--PHGFI-FATFMLASMLGSSFASRLLA 305 (416)
Q Consensus 249 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------------~~--~~g~~-~~~~~~~~~~~~~~~~~l~~ 305 (416)
..+.....+. ....|..+. ......+.+. .. ...+. .....+....|.++.+++.|
T Consensus 328 tlllw~iwfgnafsyyg~VL-lttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVL-LTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHH-HHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 2221222222 334443222 3333333211 00 01111 12236777889999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccc
Q 014905 306 HSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARS 385 (416)
Q Consensus 306 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg 385 (416)
| .|+++.+.....+.++..+.+..... .....+..+...++.+..+.+.+.|..|.+|+..|+
T Consensus 407 r--lGRKkTMal~l~~f~iflfll~~c~~---------------rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 407 R--LGRKKTMALSLILFGIFLFLLTTCKT---------------RNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred H--hcchhHHHHHHHHHHHHHHHHHHhcC---------------cchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 9 88888888877777755554444331 223455566667888888888899999999999999
Q ss_pred eeeeeeecccceeee
Q 014905 386 TIMNFFRIPLNVFVC 400 (416)
Q Consensus 386 ~~~g~~~~~~~~~~~ 400 (416)
++.|..+-...+..+
T Consensus 470 tgvGtcSsmaRIggI 484 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGI 484 (528)
T ss_pred cchhhhhhHHhhhhh
Confidence 999887655544433
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.73 E-value=9.3e-22 Score=188.24 Aligned_cols=311 Identities=17% Similarity=0.169 Sum_probs=191.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch---hHHHHHHHHHHHHhhhhhhhhhhhh
Q 014905 72 GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS---EYKILMLGRIFGGIATSLLFSAFES 147 (416)
Q Consensus 72 ~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (416)
.+.+++.+...++..+++++.|.++||+|||+.++++..+..++.+ ..+++ +++.+.++|++.|++.|...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4578999999999999999999999999999999999999999988 88888 9999999999999999999999999
Q ss_pred hhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCC
Q 014905 148 WLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYG 224 (416)
Q Consensus 148 ~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 224 (416)
++.|. ++|+......+.....|..++. .++..... ..+. ++||..+....+..++..+... +.||+|+
T Consensus 126 -~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~----~~~~~~~~-~~~~--~~Wr~~~~~~~~~~l~~~~~~~-~~pESP~ 196 (451)
T PF00083_consen 126 -YISEIAPPKHRGFLSSLFQLFWALGILLAS----LIGYIVSY-YSDN--WGWRILLIFGAIPSLLVLLLRF-FLPESPR 196 (451)
T ss_pred -cccccccccccccccccccccccccccccc----cccccccc-cccc--cccccccccccccccccccccc-ccccccc
Confidence 99988 6777775555444444444433 33333311 1111 2699999988888776655553 6788764
Q ss_pred Cc-------cc--------------hhh---HHHhh------hHHHhhhcchh----HHHHHHHHHHHHHHHHHHHHhhh
Q 014905 225 DP-------EK--------------KNL---LAQFK------GAALAIASDER----IALLGAIQSLFEGSMYTFVFLWT 270 (416)
Q Consensus 225 ~~-------~~--------------~~~---~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 270 (416)
.- +. ++. .++.+ .++++++++++ .........+.+...+.....+.
T Consensus 197 wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 276 (451)
T PF00083_consen 197 WLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS 276 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 10 00 000 00000 12344555432 22222222222233323233355
Q ss_pred cccccCCCCCchH-HHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH--HhhccCCCCCCCCCCcc
Q 014905 271 PALSPNDEEIPHG-FIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPI--LTNFLETPPDVRGGGIS 347 (416)
Q Consensus 271 ~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 347 (416)
|.+.++. +.+.. .......+...++.+....+.|| .++|+....+.....++..... .... .+.+ ..
T Consensus 277 ~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~GRr~~~i~~~~~~~~~~~~~~~~~~~~-~~~~----~~-- 346 (451)
T PF00083_consen 277 PSIFENA-GISNSFLATLILGLVNFLGTLLAIFLIDR--FGRRKLLIIGLLLMAICSLILGIIFFLG-VSSS----SW-- 346 (451)
T ss_pred ccccccc-ccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccc-cccc----cc--
Confidence 5555442 22222 22222345555666666688888 6666666666555554443332 1111 0000 00
Q ss_pred cchhHHHHHHHHHHHhhh-cchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 348 LSGSLQLIGFSTFEACVG-IFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 348 ~~~~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
.....+....+.....+ ...+..+.+..|.+|++.|+++.|+.....++...+.
T Consensus 347 -~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~ 401 (451)
T PF00083_consen 347 -WSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFII 401 (451)
T ss_pred -cccccceeeeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 01222333333333444 3456777888999999999999999988877765543
No 109
>PRK11462 putative transporter; Provisional
Probab=99.73 E-value=2.6e-15 Score=143.19 Aligned_cols=307 Identities=12% Similarity=0.086 Sum_probs=174.7
Q ss_pred HHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh----hCchHHHHH-HHHHHHhhhh-hccch
Q 014905 50 MAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK----QGRKRACVT-YCITYMLSCV-TKHSS 122 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr----~Grr~~l~~-~~~~~~~~~l-~~~~~ 122 (416)
.....+...++...| +..|+++..+|.+..+.-+-.++..|+.|.++|| +||||..+. +.+..+++.. +...+
T Consensus 22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p 101 (460)
T PRK11462 22 HIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP 101 (460)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC
Confidence 334445555663444 7899999999999999999999999999999995 798776664 4455555544 33232
Q ss_pred h------HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-
Q 014905 123 E------YKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD- 191 (416)
Q Consensus 123 ~------~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~- 191 (416)
+ ...+.+..++..++......+..+ +.+|. ++|.+..++. ..+..+|..++..+...+.....+
T Consensus 102 ~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~a-l~~~lt~d~~eRt~l~s~r----~~~~~iG~~~~~~~~~plv~~~g~~ 176 (460)
T PRK11462 102 DLSMNGKMIYAAITYTLLTLLYTVVNIPYCA-LGGVITNDPTQRISLQSWR----FVLATAGGMLSTVLMMPLVNLIGGD 176 (460)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 345666666777777777766666 66644 6676664433 344444443332333222222110
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhc
Q 014905 192 TLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTP 271 (416)
Q Consensus 192 ~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
....+|+....+.+++.+++....+...+|+++++++ +...++.++..++||..+.+.....+.......... ...
T Consensus 177 ~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~---~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~-~~~ 252 (460)
T PRK11462 177 NKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT---TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGG-AMM 252 (460)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc---CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh-Hhh
Confidence 0012677776666766666665555445655432211 222455677888888776664433333222211111 222
Q ss_pred ccccCCCCC--chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccc
Q 014905 272 ALSPNDEEI--PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLS 349 (416)
Q Consensus 272 ~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (416)
.|.++..+. ..+.+.....++.+++.++.+++.|| .++|+.................+... . +
T Consensus 253 y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r--~gkk~~~~~~~~~~~~~~~~~~~~~~---------~----~ 317 (460)
T PRK11462 253 YYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDW--KCKVTIFWWTNALLAVISLAMFFVPM---------Q----A 317 (460)
T ss_pred hhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhch---------h----H
Confidence 222222222 23455566678888899999999999 66666554433333322222222221 0 2
Q ss_pred hhHHHHHHHHHHHhhhcchhHHHHHHhccCC
Q 014905 350 GSLQLIGFSTFEACVGIFWPSIMKMRSQYIP 380 (416)
Q Consensus 350 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p 380 (416)
.+...+..++.+++.+...+..+++.+|..+
T Consensus 318 ~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d 348 (460)
T PRK11462 318 SITMFVFIFVIGVLHQLVTPIQWVMMSDTVD 348 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 2233444455666666667777778877766
No 110
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.71 E-value=1e-17 Score=149.94 Aligned_cols=316 Identities=13% Similarity=0.048 Sum_probs=194.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch-------hHHHHHHHHHHHHhhhhh
Q 014905 69 FGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS-------EYKILMLGRIFGGIATSL 140 (416)
Q Consensus 69 ~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~-------~~~~l~~~r~l~G~~~~~ 140 (416)
+++...+.+..+..++.++++++.|++.||+|||+++...++++.++.+ ++++. -.+++...|++.|+|.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 5667779999999999999999999999999999999999888888776 54442 237888999999999999
Q ss_pred hhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh-----hhccCchhHHHHHHHHHHHHH
Q 014905 141 LFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD-----TLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 141 ~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~-----~~~~~w~~~f~~~~~~~~~~~ 212 (416)
.+|.+.+ ..+|. ++||...+.+-...+.|...|..++.++...+-..+.+ +...-||..+.+.++..+..+
T Consensus 161 DYPlSAt-I~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 161 DYPLSAT-IMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred CCcchHH-HhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888 88888 77888877776777777777773333333222211111 111149999999888888777
Q ss_pred HHHHHhcccCCCCc-----cchhhHHH---------------------hhhH---HHhhhcc---hhHHHHHHHHHHHHH
Q 014905 213 VIILASWTENYGDP-----EKKNLLAQ---------------------FKGA---ALAIASD---ERIALLGAIQSLFEG 260 (416)
Q Consensus 213 ~~~~~~~~~~~~~~-----~~~~~~~~---------------------~~~~---~~~~~~~---~~~~~~~~~~~~~~~ 260 (416)
...+ ..||+++-+ +.+...++ .+.+ +...+.. +.++..+...++...
T Consensus 240 y~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDi 318 (538)
T KOG0252|consen 240 YFRL-KMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDI 318 (538)
T ss_pred Hhhh-cCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 7766 556654311 10000000 0000 1111111 344444555566666
Q ss_pred HHHHHHHhhhcccccCCCCCc----------hHHHHHH-HHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Q 014905 261 SMYTFVFLWTPALSPNDEEIP----------HGFIFAT-FMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIP 329 (416)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~-~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 329 (416)
++|.... ++...++...-.+ ....... ...+.+.|.++...+.|+ .++++..+.+..+..+..+++
T Consensus 319 afy~~nL-~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~--iGRk~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 319 AFYGQNL-FQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI--IGRKYIQLMGFFIMTIFFFVI 395 (538)
T ss_pred hhhcccc-HHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh--hhhHHHHHhhHHHHHHHHHHH
Confidence 6666444 4444444211001 1111111 134445577777778888 666666666666666555444
Q ss_pred HHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc-chhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 330 ILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
...+.. .. +.....+...+..++..+ .+.....+.+|.+|++.|+++.|+.-..--...+
T Consensus 396 ~~~y~~----~~-------~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAi 456 (538)
T KOG0252|consen 396 AGPYNQ----LE-------NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAI 456 (538)
T ss_pred cCCccc----cc-------ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHH
Confidence 443321 00 112233444444444444 5566677888999999999999987654444333
No 111
>PTZ00207 hypothetical protein; Provisional
Probab=99.70 E-value=3.2e-14 Score=136.62 Aligned_cols=149 Identities=11% Similarity=0.019 Sum_probs=106.1
Q ss_pred HHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc------hhHHHHHHH
Q 014905 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS------SEYKILMLG 130 (416)
Q Consensus 58 ~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~------~~~~~l~~~ 130 (416)
.+.+++.+++|+|.++++++.+... ....++++.|+++||+|||+++.++.+...++.+ .+++ ++++.+.+.
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~ 126 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVY 126 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHH
Confidence 3443334899999999999988754 3456777899999999999999999999999887 6665 589999999
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
|++.|++.+...+.... .+.++ ++||.+.++.....++|.. ++++....... . +|+..|+..++..
T Consensus 127 r~l~G~G~~~~~~~~~~-~i~~~Fp~~RG~a~Gi~~~~~gLGsa-------I~~~l~~~l~~-~---~~~~~fl~l~vl~ 194 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVV-TVLSVFPSNRGAVVAIMKTFTGLGSA-------ILGSIQLAFFS-D---NTSAYFFFLMSFA 194 (591)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhChhhhHHHHHHHHHHHHHHHH-------HHHHHHHHHHH-H---hHHHHHHHHHHHH
Confidence 99999999888887777 66666 7788876555444443332 12333333322 2 5667777777666
Q ss_pred HHHHHHHHHhc
Q 014905 209 AFGMVIILASW 219 (416)
Q Consensus 209 ~~~~~~~~~~~ 219 (416)
++..++.....
T Consensus 195 ~vv~ll~~~~v 205 (591)
T PTZ00207 195 LVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHhhe
Confidence 66555555443
No 112
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.68 E-value=2.9e-14 Score=134.97 Aligned_cols=311 Identities=11% Similarity=0.055 Sum_probs=196.2
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHH-HHHHHhhhh-hcc-ch-hHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014905 73 EIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTY-CITYMLSCV-TKH-SS-EYKILMLGRIFGGIATSLLFSAFESW 148 (416)
Q Consensus 73 ~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~-~~~~~~~~l-~~~-~~-~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (416)
..++..++..+...+..|+.|.++|+-|+||.++.. ..+..++.. ..+ .+ +++...+..++.-++.+......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna- 149 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA- 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 347888899999999999999999999977766655 333333333 333 33 4444444555555666666666666
Q ss_pred hhhhh---ccc--------------------------CcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh------
Q 014905 149 LVAEH---NKR--------------------------GFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL------ 193 (416)
Q Consensus 149 ~i~e~---~~r--------------------------~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~------ 193 (416)
++.|. +++ ++. .+..++.|.. |. ++.-.+.-......
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---S~~G~a~Gy~-G~----~v~l~i~l~~~~~~~~~~~~ 221 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRV---SGLGWALGYI-GG----LVALLISLLLVISPGSTASN 221 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchh---HHHHHHHHHH-HH----HHHHHHHHHHHHcCCCcccc
Confidence 77755 222 222 3333333332 23 22212211111100
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchh-------hHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Q 014905 194 ALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKN-------LLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFV 266 (416)
Q Consensus 194 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (416)
.++.|..+.+.++..++..+..++..||++++++.++ .-++..+.+++..|+|......+..+++.-+..+..
T Consensus 222 ~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~ 301 (477)
T PF11700_consen 222 TWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTII 301 (477)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 1246888888888877777777767777765221111 113344566777777888888777777777777655
Q ss_pred HhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccch--hHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014905 267 FLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVE--SYMQIVFIISSASLLIPILTNFLETPPDV 341 (416)
Q Consensus 267 ~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (416)
. ....|.++..+.+ ...+.....+..++|+.+.+++.|| ++.+ +.+........+......+..... .
T Consensus 302 ~-~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r--~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~-~--- 374 (477)
T PF11700_consen 302 S-FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR--FGPKTKRTLLISLILWIIIPLYGLFGFWPS-F--- 374 (477)
T ss_pred H-HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCchhHHHHHHHHHHHHHHHHHHHHhhhc-c---
Confidence 5 7788888777775 3344444588889999999999999 6766 665555544433332222200000 0
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 342 RGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 342 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
-... +.+..++...+.|++.|..++..-++.+|+.|+++.+..+|++.+.--...+++
T Consensus 375 ~g~~---~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lG 432 (477)
T PF11700_consen 375 FGLK---SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLG 432 (477)
T ss_pred cCcc---cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 0000 456677888889999999999999999999999999999999987666655554
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=2e-13 Score=122.23 Aligned_cols=310 Identities=12% Similarity=0.082 Sum_probs=201.5
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHH-HHHHhhhh-hccch---hHHHHHHHHHHHHhhhhhhhhhhh
Q 014905 72 GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYC-ITYMLSCV-TKHSS---EYKILMLGRIFGGIATSLLFSAFE 146 (416)
Q Consensus 72 ~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~-~~~~~~~l-~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~ 146 (416)
+..|...++..+...+.+|+.|.++|+.|+||-..-.+ ....+... ..+.+ .++..++...+..++........+
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 44588889999999999999999999999776655443 33333333 33333 345556667777888887777777
Q ss_pred hhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHH--HHHHH----H-HH-----hhhccCchhHHHHHHHHHHHHHHH
Q 014905 147 SWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIIS--GLFGN----L-LV-----DTLALGPVAPFDAAACFLAFGMVI 214 (416)
Q Consensus 147 ~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~--~~l~~----~-~~-----~~~~~~w~~~f~~~~~~~~~~~~~ 214 (416)
+ ++.+..+++.....-+..++.|.. |+.+..++. ....+ . .. ...+..-|..+.+.++..++..+-
T Consensus 138 s-~L~~~~~k~~~~riS~lg~~~gyl-gs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 138 S-MLPRLTTKDNMGRISGLGWALGYL-GSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred h-HhhhhcCccccCcccccccccccc-cchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 7 887553332222223334444432 221111111 01111 0 00 001125688888888888888777
Q ss_pred HHHhcccCCCCc-cc-h---hhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHH
Q 014905 215 ILASWTENYGDP-EK-K---NLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIF 286 (416)
Q Consensus 215 ~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~ 286 (416)
.++..++.++.. .. + +.-++.++++++.++++.+....+..++++-+..+... ....|.....+.+ ...+.
T Consensus 216 m~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~-~~~~fg~~~~gls~~~lll~g 294 (438)
T COG2270 216 MILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILA-MGGVFGAADLGLSSTELLLIG 294 (438)
T ss_pred HHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHH-HHHHHHHHHcCccHHHHHHHH
Confidence 776666655332 11 1 11244556788888888877777777777666666444 6677777666665 44445
Q ss_pred HHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014905 287 ATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGI 366 (416)
Q Consensus 287 ~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 366 (416)
....+..++|+++.|++.|| ++.++.+..+.++..+.+....+.. .....++.-.+.|.+.|.
T Consensus 295 ~~~~vvA~lg~ii~g~Ld~r--fg~k~vl~~~lvi~~~~~~~~~~~~---------------~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 295 IALSVVAALGAIIAGFLDER--FGSKPVLMIGLVILSIAALYLIFLE---------------GELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hCCceeehHHHHHHHHHHHHHHHcc---------------ccHHHHHHHHHHHHhcch
Confidence 55588889999999999999 8888877777777665555444433 223355566788899999
Q ss_pred chhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 367 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 367 ~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+...-++..+.+|+++-++.+|++++.-...++.
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~ 392 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFL 392 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHH
Confidence 99999999999999999999999998765554433
No 114
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.59 E-value=1.1e-12 Score=120.14 Aligned_cols=341 Identities=19% Similarity=0.170 Sum_probs=207.5
Q ss_pred hhhHHHHHHHHH---HHHHH-HhHHHHHHHHHHHcC----CChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHH
Q 014905 37 SFMNSYIIVYSL---MMAGD-WLQGPYVYYLYSTYG----FGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVT 107 (416)
Q Consensus 37 ~~~~~~~~~~~~---~~~~~-~~~~~~l~~l~~~~~----~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~ 107 (416)
+..|.++.++.. --+++ ++..+...-++.+++ +|+++..-+++++..-.-+...++|+++|| +|+|++++.
T Consensus 18 ~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~l 97 (498)
T COG3104 18 GQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVL 97 (498)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 345556555552 22232 344444323334555 999999888888888888889999999999 599999999
Q ss_pred HHHHHHhhhh-hccc--hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-----cccCcchhhHHHHHHHHHHHHhhHHH
Q 014905 108 YCITYMLSCV-TKHS--SEYKILMLGRIFGGIATSLLFSAFESWLVAEH-----NKRGFDQQWLSETFSKAIFLGNGLVA 179 (416)
Q Consensus 108 ~~~~~~~~~l-~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-----~~r~~~~~~~~~~~~~~~~~G~~~~~ 179 (416)
+.++..++.+ .+.+ .+...++++-.+.++|.|..-+...+ ++.|. .+|+... ..+..+..+|+
T Consensus 98 Gail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~-llg~ly~~~DprrD~gF----t~fY~~iNiGs---- 168 (498)
T COG3104 98 GAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISS-LLGELYPKDDPRRDGGF----TLFYMGINIGS---- 168 (498)
T ss_pred HHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHH-HHHHhcCCCCcccCCCc----cEEEEEeehHH----
Confidence 9999999998 6666 36788999999999999999888888 88854 2344442 33333444555
Q ss_pred HHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhccc---CC-----CCccchhhHH-----------H------
Q 014905 180 IISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTE---NY-----GDPEKKNLLA-----------Q------ 234 (416)
Q Consensus 180 ~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~-----------~------ 234 (416)
.++|.+.+++.+.+ ||+..|..+++-..+.++......+. .+ .+.+.++... .
T Consensus 169 l~~p~i~~~~~~~~--g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (498)
T COG3104 169 LIAPIITGLLAINY--GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLL 246 (498)
T ss_pred HHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 88888989888887 99999999998888877766533221 11 0000000000 0
Q ss_pred hhh----------------HHHhhh------cchhHHHHHHHHHHHHHHHHHHHH---h----hhcccccCC---CCCch
Q 014905 235 FKG----------------AALAIA------SDERIALLGAIQSLFEGSMYTFVF---L----WTPALSPND---EEIPH 282 (416)
Q Consensus 235 ~~~----------------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~---~~~~~ 282 (416)
..+ -+.+.+ .+|+-....+..++....++.... . +.......+ .+.+.
T Consensus 247 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~ 326 (498)
T COG3104 247 NQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPP 326 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCH
Confidence 000 001111 122222222222222222222111 0 111111112 22457
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcc-----cccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHS-----SLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGF 357 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (416)
++.-+...+..++.+++..++-.|. +.+.+...-++..+++..+++..........+ ++.. +.++.+...
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~---~~~~--s~~~lil~y 401 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGP---SGLV--SVWWLVLSY 401 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCc--CHHHHHHHH
Confidence 7777777777777777766665552 12223345555555555555444431111111 1111 667888888
Q ss_pred HHHHHhhhcchhHHHHHHhccCCccccceeeeeeec
Q 014905 358 STFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 393 (416)
Q Consensus 358 ~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~ 393 (416)
.+.+++.=+..|+..+++.+..|+...+..+|..-.
T Consensus 402 ~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfL 437 (498)
T COG3104 402 VLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFL 437 (498)
T ss_pred HHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 888898888999999999999999999988886543
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.57 E-value=1e-12 Score=118.63 Aligned_cols=241 Identities=11% Similarity=0.038 Sum_probs=150.3
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh---
Q 014905 120 HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL--- 193 (416)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~--- 193 (416)
...+++.++++-++.|.|.+...+..+. ++++. +++.+..++.+..+++|. .++|.+++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~-~v~~~~~~~~~~~~l~~~~~~~~~G~--------~~gP~i~~~~i~~~~~~ 76 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANP-YVSILGPIETAASRLALTQAFNKLGT--------TVAPLFGGSLILSGAGD 76 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHH-HHHHHCCcchHHHHHHHHHHHhhhHH--------HHHHHHHHHHHhcCCcc
Confidence 4568999999999999999999999999 88755 455566555555555554 44445555444110
Q ss_pred -----------ccCchhHHHHHHHHHHHHHHHHHHh-cccCCCCccchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHH
Q 014905 194 -----------ALGPVAPFDAAACFLAFGMVIILAS-WTENYGDPEKKNLLAQFKGAALAIASDERIALLGAIQSLFEGS 261 (416)
Q Consensus 194 -----------~~~w~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (416)
.++|+.+|++.+.+..+..+...+. .||.+++++++. .++.....++.+|+|..+...+..++....
T Consensus 77 ~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~f~yvg~ 155 (310)
T TIGR01272 77 LSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARV-SSGDTTQKTSAFQFTHLVLGALGIFVYVGA 155 (310)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccccc-ccccccchhhHHhhHHHHHHHHHHHHHHHH
Confidence 0279999996666555444443322 344322221111 111111223456667766655555544434
Q ss_pred HHHHHHhhhcccccCC--CCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccC
Q 014905 262 MYTFVFLWTPALSPND--EEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLE 336 (416)
Q Consensus 262 ~~~~~~~~~~~~~~~~--~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (416)
-.. ...|.+.|+.+. .+.+ .+...+....+.++|+++.+++.|| ++.+|.+.....+..+...+.. ...
T Consensus 156 e~~-~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r--~g~~~~l~~~~~l~~~~~~l~~-~~~-- 229 (310)
T TIGR01272 156 EVS-AGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM--ISQGRYLAFNAFLAVLLSIGAA-LTH-- 229 (310)
T ss_pred HHH-HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHH-HcC--
Confidence 444 333889999753 3443 6788888899999999999999999 7877776655554443332222 221
Q ss_pred CCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeee
Q 014905 337 TPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 390 (416)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~ 390 (416)
+ ........+.+++.+..+|...+...+..|++ .+++.++
T Consensus 230 ------------~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai 269 (310)
T TIGR01272 230 ------------G-YVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGI 269 (310)
T ss_pred ------------C-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHH
Confidence 1 22345666788999999999999998888864 3445454
No 116
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.54 E-value=1.8e-12 Score=122.43 Aligned_cols=162 Identities=12% Similarity=0.133 Sum_probs=117.8
Q ss_pred hHHHHHHHHH-HHcCCCh--------hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc-ch-
Q 014905 55 LQGPYVYYLY-STYGFGK--------GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH-SS- 122 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~--------~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~-~~- 122 (416)
....+. +.+ ++.|.++ ++.+...++..+...++.++.|+++||+|||+++..+.+...++.. ... .+
T Consensus 226 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~ 304 (418)
T TIGR00889 226 ITNIFG-NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE 304 (418)
T ss_pred HHHHhH-HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 344455 555 6666553 6679999999999999999999999999999999999888877654 333 22
Q ss_pred --hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc---
Q 014905 123 --EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA--- 194 (416)
Q Consensus 123 --~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~--- 194 (416)
+++.+++.+++.|++.+...+.... ++.|. ++|++..++.+ .....+|. .++|.+++.+.+..+
T Consensus 305 ~~~~~~l~l~~~l~g~~~~~~~~~~~~-~i~~~~p~~~~g~~~g~~~---~~~~~lg~----~iGp~l~G~l~~~~g~~~ 376 (418)
T TIGR00889 305 YFGYALLFLSMIVYGCAFDFFNISGSV-FVEKEVPVHIRASAQGLFT---LMCNGFGS----LLGYILSGVMVEKMFAYG 376 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHH---HHHHhhHH----HHHHHHHHHHHHHhcccc
Confidence 3466778899999999888777777 77766 55666533331 12233344 777788888877642
Q ss_pred -cCchhHHHHHHHHHHHHHHHHHHhcccCCCC
Q 014905 195 -LGPVAPFDAAACFLAFGMVIILASWTENYGD 225 (416)
Q Consensus 195 -~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 225 (416)
.||+..|.+.+++.++..++..++.+|++++
T Consensus 377 ~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 377 TFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 3799999998888888887777777776544
No 117
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.53 E-value=1.2e-14 Score=122.20 Aligned_cols=310 Identities=12% Similarity=0.059 Sum_probs=187.4
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHHHHhhhh-h---ccchhHHHHHHHHHHHHhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCITYMLSCV-T---KHSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~l-~---~~~~~~~~l~~~r~l~G~~~~ 139 (416)
.+.+++.++..++.+.+.....+...+.|++.|| +|.|..-++-+....++-+ . ...+.+|.+..+|++.|+|.-
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 4677788899999999999999999999999995 6777665555555555544 2 345789999999999999887
Q ss_pred hhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHH----HHHHHHHHHHH
Q 014905 140 LLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPF----DAAACFLAFGM 212 (416)
Q Consensus 140 ~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f----~~~~~~~~~~~ 212 (416)
....+-++ +..-+ ++.+...++..+....|.+.-. .+.|.+.......++.--+... .+....+....
T Consensus 152 SlAVaQN~-yav~wFKGKELn~vfGlqlSvAR~GstvNf----~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~sl 226 (459)
T KOG4686|consen 152 SLAVAQNK-YAVYWFKGKELNFVFGLQLSVARLGSTVNF----LLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSL 226 (459)
T ss_pred hhhhhhcc-eeEEEecCccccchhhHHHHHHHhhceeee----eecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 76666666 66533 5556665555444444443322 3334443333222200001110 11111111111
Q ss_pred HHHHHh-cccCCCCc--cchhhHHHhhhHHHhhhc-chhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHH
Q 014905 213 VIILAS-WTENYGDP--EKKNLLAQFKGAALAIAS-DERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFI 285 (416)
Q Consensus 213 ~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~ 285 (416)
+..... ..|+..+. ++++-...+...+.+... .|.+|.+.....++....+-+.. ..|.++++..+.+ .+.+
T Consensus 227 ical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~-lg~~fF~~rfGlS~~~a~~i 305 (459)
T KOG4686|consen 227 ICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFIT-LGPMFFQKRFGLSAVSAGNI 305 (459)
T ss_pred HHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhh-hhHHHHHHhhCCChhhccch
Confidence 111101 11111110 000000001111222222 27788887888888777777666 8899999887774 6666
Q ss_pred HHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhh
Q 014905 286 FATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVG 365 (416)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g 365 (416)
.+.......+.+++.|.++|| .+.+-.+....++..+..-...++.. +..+..+.+.|..+.
T Consensus 306 ~s~vy~Isav~spvfg~i~Dk--~G~n~~wv~~a~~~tl~~H~~l~Ft~----------------lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 306 LSTVYGISAVLSPVFGAISDK--YGFNLWWVASACILTLLGHSGLFFTF----------------LSPYTSMTFLGLSYS 367 (459)
T ss_pred hhhhhhhhhhhhhhHHHhHhh--hcceehhHHHHHHHHHHHhhhHHhhh----------------ccHHHHHHHHhhhHH
Confidence 666666677788999999999 44444444333333333222222222 335677888888888
Q ss_pred cchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 366 IFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 366 ~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
..-...+..++..+|+++.|+++|..+-..|+.
T Consensus 368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLg 400 (459)
T KOG4686|consen 368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLG 400 (459)
T ss_pred HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhh
Confidence 877777888999999999999999988888875
No 118
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.52 E-value=4.7e-12 Score=114.09 Aligned_cols=316 Identities=15% Similarity=0.160 Sum_probs=192.7
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh--hccc-----hhHH--HHHHHHHHHH
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV--TKHS-----SEYK--ILMLGRIFGG 135 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l--~~~~-----~~~~--~l~~~r~l~G 135 (416)
+.+| +....-|...++.+.+.....++-|+.||+|-|....++...-+++.. +.-+ +.++ ....+..+.+
T Consensus 73 ~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa 151 (480)
T KOG2563|consen 73 SFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAA 151 (480)
T ss_pred HHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHH
Confidence 4566 777788899999999999999999999999999999999888887765 2222 2345 6667777777
Q ss_pred hhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHH--HhhhccCchh--HHHHHHHH
Q 014905 136 IATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLL--VDTLALGPVA--PFDAAACF 207 (416)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~--~~~~~~~w~~--~f~~~~~~ 207 (416)
.+.-.....- + -+++. ++|..+... -..+.-+|.+++.++.|++-+.- .+.. .|.. .|.....+
T Consensus 152 ~Aq~Fim~lP-s-kiA~~WF~~~qra~A~~~----~v~~n~LGvavg~llppilV~~~~~~~~~--~~~~~~~f~~~~~l 223 (480)
T KOG2563|consen 152 AAQPFILGLP-S-KIAAVWFPPDQRAIATVL----GVMGNPLGVAVGFLLPPILVPSSKDSEDN--SWLFFTLFLGVECL 223 (480)
T ss_pred HhhhHhhccc-c-HHHHhhCCcchhhhhhhH----HHhcchHHHHHHhhccceecCCCCCcchh--HHHHHHHHHHHHHH
Confidence 7766554421 2 23322 667666333 23333444444446666654432 1122 4544 34544444
Q ss_pred HHHHHHHHHHhcccCCCCc-cchhhH---HHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccC-CCCCch
Q 014905 208 LAFGMVIILASWTENYGDP-EKKNLL---AQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPH 282 (416)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 282 (416)
..+.+.+..+..+++|+.+ +..+.+ .+..++.++.++|+++.++.+......+.++.......+..-.. ..+...
T Consensus 224 ~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~a 303 (480)
T KOG2563|consen 224 AALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFA 303 (480)
T ss_pred HHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCcccc
Confidence 4444444443444433222 111111 23566888899999998887766666555555333222111111 123458
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEA 362 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (416)
|.+.....+++++++.+.+.+.||. .+.++...............+..... ... ..+.......++|+
T Consensus 304 G~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~~~~l~~~t~--------~~~---~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 304 GYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVGTLMLLTCTL--------FLG---DSVIVFTTCGLLGF 371 (480)
T ss_pred chhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHhhc--------cCC---ceEehhhhHHHHHH
Confidence 9999999999999999999999993 33333333333333222111111111 000 33455666677778
Q ss_pred hhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 363 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 363 ~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.....|+...+..|..=++.-++..|+.++..+++.+.
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVI 410 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHH
Confidence 888888988888889887778888899988877776544
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.50 E-value=1.8e-12 Score=119.99 Aligned_cols=174 Identities=17% Similarity=0.147 Sum_probs=121.5
Q ss_pred HHHHHHHhHHHHHHHHHHH--cCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCc-hHHHHHHHHHHHhhhhhc-----
Q 014905 48 LMMAGDWLQGPYVYYLYST--YGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGR-KRACVTYCITYMLSCVTK----- 119 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~--~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~l~~----- 119 (416)
+.....++..|-..|..++ .+.+.+..|++.++..++.+++++..|.+..|.++ |+.++.+.+...++.+.+
T Consensus 45 l~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~ 124 (488)
T KOG2325|consen 45 LVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAY 124 (488)
T ss_pred HHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHh
Confidence 4455555555555343355 67777888999999999999999999999999996 888888888888877622
Q ss_pred cch-hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-
Q 014905 120 HSS-EYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA- 194 (416)
Q Consensus 120 ~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~- 194 (416)
..+ .-+.++++|++.|+|.+... ...+ |+++. ++|.++.+..+.....|..+|+ .+++.+++...+.+.
T Consensus 125 ~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~-Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp----~~q~~f~~Lg~~G~~i 198 (488)
T KOG2325|consen 125 VPNGVKYLMLVARILTGVGVGNFA-VLRA-YIADASTVEDRPRAFAATSGGFVLGIILGP----TIQLAFTPLGEKGFMI 198 (488)
T ss_pred cccchHHHHHHHHHHcCcCcccHH-HHHH-HHHhccCccchHHHHHHhhhHHHHHHHHhH----HHHHHHhhhcCCceEE
Confidence 223 56899999999999987654 3455 88764 7777775555455555555555 544444443321110
Q ss_pred ------cCchhHHHHHHHHHHHHHHHHHHhcccCCCCcc
Q 014905 195 ------LGPVAPFDAAACFLAFGMVIILASWTENYGDPE 227 (416)
Q Consensus 195 ------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (416)
.-+..+-|+.+++.++..+......+|.+++.+
T Consensus 199 ~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~ 237 (488)
T KOG2325|consen 199 LPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGII 237 (488)
T ss_pred cCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcc
Confidence 124567788888888888888777888776553
No 120
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=1.1e-11 Score=116.31 Aligned_cols=151 Identities=13% Similarity=0.093 Sum_probs=109.2
Q ss_pred HhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH
Q 014905 54 WLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG 130 (416)
Q Consensus 54 ~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~ 130 (416)
....... |.| +++|.++.+.+.+.+...+...++.++.|+++||+|||+.+..+.....+... ....++.+.+++.
T Consensus 233 ~~~~~~~-p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 311 (393)
T PRK15011 233 SLYIINM-PLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGL 311 (393)
T ss_pred HHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3344455 555 57899999999998888888888999999999999999988777555444444 4456677778888
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
+++.+++.+...+.... +..|. ++|+...+..+. ...+|. .++|.+++.+.+.. +|+..|.+..++.
T Consensus 312 ~~l~~~~~g~~~~~~~~-~~~~~~p~~~g~~~~~~~~----~~~lg~----~~g~~l~G~i~~~~--g~~~~~~~~~~~~ 380 (393)
T PRK15011 312 QLLNAIYIGILGGIGML-YFQDLMPGQAGSATTLYTN----TSRVGW----IIAGSLAGIVAEIW--NYHAVFWFALVMI 380 (393)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCCCCcchHHHHHHH----HHHHHH----HHHHHHHHHHHHHh--hhHHHHHHHHHHH
Confidence 88888877766665555 65655 556666444322 233444 67777888888776 9999999888887
Q ss_pred HHHHHHHH
Q 014905 209 AFGMVIIL 216 (416)
Q Consensus 209 ~~~~~~~~ 216 (416)
++..+..+
T Consensus 381 ~~~~~~~~ 388 (393)
T PRK15011 381 IATLFCLL 388 (393)
T ss_pred HHHHHHHH
Confidence 77766665
No 121
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.47 E-value=1.1e-10 Score=105.13 Aligned_cols=303 Identities=13% Similarity=0.077 Sum_probs=187.1
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhC-----chHHHHHH-HHHHHhhhh------hccch--------h-
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQG-----RKRACVTY-CITYMLSCV------TKHSS--------E- 123 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~G-----rr~~l~~~-~~~~~~~~l------~~~~~--------~- 123 (416)
.|++++....+.+.+...+.+. ..+.+|+.||+.+ ||..+++. ......+.. ..... .
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 6899999999999999888766 5899999999999 88887765 222222111 11111 1
Q ss_pred H--HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCch
Q 014905 124 Y--KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPV 198 (416)
Q Consensus 124 ~--~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~ 198 (416)
. ....+.-.+.|+|.+...++..+ +++|. ++|++..++..... .+|. +++..+.+.+.+.+ +..
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lA-Ll~D~~~e~~R~~~v~ivw~Ml----i~G~----iv~ai~~g~lL~~~--s~~ 155 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLA-LLADLAPEERRPRVVAIVWVML----IVGI----IVSAIVFGRLLDPF--SPE 155 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHH-HHHhcCCHhhhhhhHHHHHHHH----HHHH----HHHHHHHHHHcccc--CHH
Confidence 1 23444567778888888887777 88866 78888855443333 3444 44445555554443 211
Q ss_pred h---HHHHHHH-HHHHHHHHHHHhcccCCCCc-cchhhHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 014905 199 A---PFDAAAC-FLAFGMVIILASWTENYGDP-EKKNLLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPAL 273 (416)
Q Consensus 199 ~---~f~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (416)
- .+...++ ...+..+..+...+++++.. ++++++...++.++++.++|+........++...+++.-.. .+-.|
T Consensus 156 rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~-iLEPy 234 (403)
T PF03209_consen 156 RLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDV-ILEPY 234 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHH-HcCCc
Confidence 1 1222222 22222222332222222222 12222344556778888887777665555555555555333 55556
Q ss_pred ccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccch
Q 014905 274 SPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSG 350 (416)
Q Consensus 274 ~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (416)
--+..+.+ ...+.+....+.+++-...+++..|. .++++...+++.....++..+....... +.
T Consensus 235 gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~-~~~~~~a~~G~~~~~~~f~lii~a~~~~------------~~ 301 (403)
T PF03209_consen 235 GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRR-LGKKRTAALGCLLGALAFALIILAGPLG------------SP 301 (403)
T ss_pred hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHHHHHHHHHHHhcc------------cc
Confidence 66666775 34455556888888888888888753 6666666666666665555444433211 45
Q ss_pred hHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeec
Q 014905 351 SLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 393 (416)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~ 393 (416)
+.......++|++.|.......+...+..++++.|..+|..-.
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGa 344 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGA 344 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHH
Confidence 7788889999999999888778888899998888877775543
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=3.3e-11 Score=113.48 Aligned_cols=157 Identities=18% Similarity=0.185 Sum_probs=111.7
Q ss_pred HHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHH
Q 014905 50 MAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKIL 127 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l 127 (416)
..+.....+++ +.| ++.|.+ +.+...+...++..++.+..|++.||+||||.+..+.....++.. ....++.+.+
T Consensus 229 ~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (399)
T PRK05122 229 SIGFGTIATFI-TLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMA 305 (399)
T ss_pred HHHHHHHHHHH-HHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34444455566 555 666663 456667778888899999999999999999999888777777766 5667788888
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHH
Q 014905 128 MLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAA 204 (416)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~ 204 (416)
++.+++.|++.+...+.... ...|. ++|++..+.. +....+|. .+++.+.+.+.+.. ||+..+++.
T Consensus 306 ~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~----~~~~~~g~----~~~~~~~g~l~~~~--g~~~~~~~~ 374 (399)
T PRK05122 306 LIGAALTGFGFSLVFPALGV-EAVKRVPPQNRGAALGAY----SVFLDLSL----GITGPLAGLVASWF--GYPSIFLAA 374 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHH-HHHHhCCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHc--CHHHHHHHH
Confidence 88899999999887776555 55543 5566664433 33333444 55556677777776 899999998
Q ss_pred HHHHHHHHHHHHHhcc
Q 014905 205 ACFLAFGMVIILASWT 220 (416)
Q Consensus 205 ~~~~~~~~~~~~~~~~ 220 (416)
+.+.++..+......+
T Consensus 375 ~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 375 ALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 8888777766664433
No 123
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.43 E-value=4.1e-11 Score=111.83 Aligned_cols=149 Identities=16% Similarity=0.180 Sum_probs=109.7
Q ss_pred HHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 56 QGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 56 ~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
..... |.+ +++|.++.+.|.+.+.......++.+..|++.||+|||+.+.++.+...+... ....++.+.+.+.++
T Consensus 218 ~~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (375)
T TIGR00899 218 YIINM-PLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQL 296 (375)
T ss_pred HHhhh-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344 444 67899999999998888778888899999999999999998887666555544 445667888888889
Q ss_pred HHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
+.|++.+...+.... +..|. ++++.. . +..+....+|. .++|.+.+.+.+.. ||+..|++.++..++
T Consensus 297 ~~g~~~g~~~~~~~~-~~~~~~~~~~~~~---~-~~~~~~~~~g~----~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~ 365 (375)
T TIGR00899 297 LNAIFIGILAGIGML-YFQDLMPGRAGAA---T-TLYTNTGRVGW----IIAGSVGGILAERW--SYHAVYWFAIVMLIV 365 (375)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCcchhhHH---H-HHHHHHHHHHH----HHHHHHHHHHHHhc--cchhHHHHHHHHHHH
Confidence 999988877776666 66665 344443 2 33333333445 77778888888776 899999998888777
Q ss_pred HHHHHH
Q 014905 211 GMVIIL 216 (416)
Q Consensus 211 ~~~~~~ 216 (416)
..+...
T Consensus 366 ~~~~~~ 371 (375)
T TIGR00899 366 ALFCLL 371 (375)
T ss_pred HHHHHh
Confidence 766654
No 124
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.43 E-value=7e-11 Score=114.21 Aligned_cols=163 Identities=12% Similarity=0.166 Sum_probs=105.8
Q ss_pred HHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhh---h-hccchhHHH
Q 014905 52 GDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSC---V-TKHSSEYKI 126 (416)
Q Consensus 52 ~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~---l-~~~~~~~~~ 126 (416)
.......++++.+ +++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.+...+.. + ...+++...
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 3444455663333 5789998888888888889999999999999999999999887765433222 2 223445777
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA 203 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~ 203 (416)
+++++++.|++.+...+.... ++.|. +.|+.. .+..++.+... . .++|.+.+.+.+.. .+|+.+++.
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~-~~~~~~p~~~Rg~~---~g~~~~~~~~~-g----~~~p~i~g~l~~~~-~~~~~~~~~ 414 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMAS-TLPAMFPTHIRYSA---LAAAFNISVLV-A----GLTPTLAAWLVEST-QNLMMPAYY 414 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHCCCccchHH---HHHHHHHHHHH-H----HHHHHHHHHHHHHh-CCchHHHHH
Confidence 788888888776655554455 55555 556665 32234444333 3 45666666666543 257777776
Q ss_pred HHHHHHHHHHHHHHhcccCCCC
Q 014905 204 AACFLAFGMVIILASWTENYGD 225 (416)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~ 225 (416)
..+..++..+..+ +.||+++.
T Consensus 415 ~~~~~~i~~~~~~-~~pes~~~ 435 (490)
T PRK10642 415 LMVVAVIGLITGV-TMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHH-HhccccCC
Confidence 6666665555554 55777654
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.42 E-value=3.5e-11 Score=114.08 Aligned_cols=150 Identities=12% Similarity=0.067 Sum_probs=112.3
Q ss_pred HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhh
Q 014905 66 TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSA 144 (416)
Q Consensus 66 ~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (416)
+.+.+..+.|.+.++..+...++.++.|+++||+|||+.+..+..+..++.. ..++++++.+++.+++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 3467778899999999999999999999999999999999988888887766 667888999999999999988877666
Q ss_pred hhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCC
Q 014905 145 FESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENY 223 (416)
Q Consensus 145 ~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 223 (416)
... ++.|. ++|..... ....++.+..+|. .+++.+.+.+.+.. ||+..|...+++.++..++.....++++
T Consensus 336 ~~~-~~~~~~~~~~~a~~-~~~~~~~~~~lg~----~ig~~~~G~l~~~~--G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 336 VFK-YITLNFDVRLSATI-YLVGFQFAKQLGA----VFLSTLAGNLYDSI--GFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHH-HHHHHcCccceeee-eeehHHHHHHHHH----HHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 666 66665 22222211 1111333334444 88889999999887 9999999888877766665554555443
No 126
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=4.6e-11 Score=108.22 Aligned_cols=205 Identities=20% Similarity=0.240 Sum_probs=137.9
Q ss_pred chhHHHHHHHHHHHHHHHH--hc-cc-cccCCCC-c----cchhhhH-HHH---HHHHHHHHHHHhHHHHHHHHH-HHcC
Q 014905 3 SFYFVVFACLAALVVAMEL--SK-NS-KDRIGTS-S----SFNSFMN-SYI---IVYSLMMAGDWLQGPYVYYLY-STYG 68 (416)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~-~----~~~~~~~-~~~---~~~~~~~~~~~~~~~~l~~l~-~~~~ 68 (416)
++||..|.+...++++... .+ -+ ++++++. . +.+..++ ... ...++...+......|+.|.. +..|
T Consensus 164 ~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g 243 (394)
T COG2814 164 FGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAG 243 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccC
Confidence 4688888877766665553 11 11 1111111 1 2222222 222 222244555566667776777 6789
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh--hccchhHHHHHHHHHHHHhhhhhhhhhhh
Q 014905 69 FGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV--TKHSSEYKILMLGRIFGGIATSLLFSAFE 146 (416)
Q Consensus 69 ~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (416)
+|.++++++...+.++..+++...|+++|| +.|+.+.....+..+..+ ....++.+..++.-++.|++.........
T Consensus 244 ~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 244 FSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 999999999999999999999999999999 988888888676666655 44556667777777777777665555444
Q ss_pred hhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 014905 147 SWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASW 219 (416)
Q Consensus 147 ~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 219 (416)
. -+++. +.++...++....+++|..+|. .+++...+++ |+....++.+++.+++..+.....
T Consensus 323 ~-~~a~~~p~~~~~a~sl~~aa~nlgia~GA--------~lGG~v~~~~--g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 323 T-RLARLAPDAADLAGSLNVAAFNLGIALGA--------ALGGLVLDAL--GYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred H-HhcccCCCchHHHHHHHHHHHHHHHHHHH--------HHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 33342 5666666666666666665555 6777777776 999999999999888887776443
No 127
>PRK03545 putative arabinose transporter; Provisional
Probab=99.41 E-value=7e-11 Score=110.93 Aligned_cols=152 Identities=15% Similarity=0.105 Sum_probs=107.6
Q ss_pred HHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhh-h-hccchhHHHHHHHHHH
Q 014905 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSC-V-TKHSSEYKILMLGRIF 133 (416)
Q Consensus 57 ~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~-l-~~~~~~~~~l~~~r~l 133 (416)
..++++.+ ++.|.|+.+.+++.+...++..+++++.|+++||+|||+..... .....+. . ....++.+.+.+..++
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~l 303 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAI-ALLLVCLLLLLPAANSEWHLSVLSIF 303 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 34554444 56899999999999999999999999999999999988754433 3333333 2 3455677888888889
Q ss_pred HHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFG 211 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~ 211 (416)
.|++.+...+...+ .+.|. ++|+++.+..+.. ..+|. .+||.+++.+.+.. |++..|...+.+.+++
T Consensus 304 ~g~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~----~~~g~----~~G~~~~G~~~~~~--g~~~~~~~~~~~~~~~ 372 (390)
T PRK03545 304 WGIAIMCIGLAMQV-KVLKLAPDATDVAMALFSGI----FNIGI----GAGALLGNQVSLHL--GLSSIGYVGAALALAA 372 (390)
T ss_pred HHHHHhcchHHHHH-HHHHhCCCcHHHHHHHHHHH----HHHHH----HHHHHHHHHHHhcc--ChhHHHHHHHHHHHHH
Confidence 99987766665555 55544 4555553333222 33344 66778888888886 9999999999888887
Q ss_pred HHHHHHhcc
Q 014905 212 MVIILASWT 220 (416)
Q Consensus 212 ~~~~~~~~~ 220 (416)
.+......+
T Consensus 373 ~~~~~~~~~ 381 (390)
T PRK03545 373 LVWSILIFR 381 (390)
T ss_pred HHHHHHHcc
Confidence 777665544
No 128
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.41 E-value=1.1e-10 Score=109.33 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=106.9
Q ss_pred HHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH
Q 014905 53 DWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG 130 (416)
Q Consensus 53 ~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~ 130 (416)
......++ |.| ++.|.++++.|.+.+...++..+++++.|++.||+|||+.+..+.....++.. .. . .......
T Consensus 216 ~~~~~~~l-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~ 291 (381)
T PRK03633 216 LGSLYGLM-PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPA 291 (381)
T ss_pred HHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHH
Confidence 33344456 666 78899999999999999999999999999999999999999888777766655 32 2 2233456
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
..+.|++.....|...+ .+.|..++++..+.. .....+..+|. .++|.+++.+.++. +|++.|.+.+.+.++
T Consensus 292 ~~l~g~~~~~~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~lG~----~igp~~~G~l~~~~--g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 292 LFILGAAGFTLYPVAMA-WACEKVEHHELVAMN-QALLLSYTVGS----LLGPSFTAMLMQNY--SDNLLFIMIASVSFI 363 (381)
T ss_pred HHHHHHHHHhHHHHHHH-HHHccCCHHHHHHHH-HHHHHHHHHHH----HHHHHHHHHHHHHh--CccHHHHHHHHHHHH
Confidence 67777777667777777 666652221111112 33333344445 88889999998887 899999988877776
Q ss_pred HHHHHH
Q 014905 211 GMVIIL 216 (416)
Q Consensus 211 ~~~~~~ 216 (416)
..+..+
T Consensus 364 ~~~~~~ 369 (381)
T PRK03633 364 YLLMLL 369 (381)
T ss_pred HHHHHH
Confidence 655544
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.40 E-value=6.2e-11 Score=111.99 Aligned_cols=158 Identities=20% Similarity=0.169 Sum_probs=113.1
Q ss_pred HHHHhHHHHHHHHH-HHcCCChh----hHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhH
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKG----EIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEY 124 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~----~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~ 124 (416)
.......+++ +.| ++.+.+.. ..+.+.++..++..++.+..|+++||+|||+.+..+.....++.+ ....++.
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T PRK09874 233 VATGSIAPIL-TLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTP 311 (408)
T ss_pred HHHHHHHHHH-HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccH
Confidence 3334445565 555 44433332 246666777788889999999999999999999988777776666 5566788
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHH
Q 014905 125 KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPF 201 (416)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f 201 (416)
+.+.+.+++.|++.+...+...+ .+.+. ++|++..+.. .....+|. .++|.+++.+.+.. ||+..|
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~----~~~~~~g~----~~gp~~~G~l~~~~--g~~~~f 380 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQT-LLVYNSSNQIAGRIFSYN----QSFRDIGN----VTGPLMGAAISANY--GFRAVF 380 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHH-HHHHhCCcccceeeehHH----HHHHHHHH----HhhHHHHHHHHhhc--chhHHH
Confidence 88889999999999988887777 65543 5567764443 33333444 66778888887776 999999
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 014905 202 DAAACFLAFGMVIILASWT 220 (416)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~ 220 (416)
++.+++.++..+...+..+
T Consensus 381 ~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 381 LVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999888887776664433
No 130
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.40 E-value=9.7e-11 Score=109.58 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=120.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+...+......+. |.+ ++.|.++.++|.+.+...+...+..+..|++.||+|+|+.+.++.+...+... ..+.++.+
T Consensus 216 l~~~~~~~~~~~~-~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T TIGR00902 216 LIQGAHAAYYGFS-AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFP 294 (382)
T ss_pred HHHHHHHHHHHHH-HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHH
Confidence 4445555566677 556 88999999999999999999999999999999999999999999999988888 77889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHH-HHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFS-KAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
.+++.+++.|++.+...+.... ++.+. ++|+.. ++.++ .+..+|. .+++.+++.+.++. |+ ..|.
T Consensus 295 ~~~~~q~l~g~~~~~~~~~~~~-~i~~~~~~~~~~~----q~~~~~~~~g~g~----~~g~~~~G~l~~~~--g~-~~~~ 362 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLAAMR-YIAAQPGSEIAKL----QALYNALAMGGLI----AIFTAFAGFIYPTL--GA-GTFV 362 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhCCHhhHHHH----HHHHHHHHHHHHH----HHHHHHHHHHHHhc--cH-HHHH
Confidence 9999999999999999998888 88765 222222 23332 2333344 88889999999887 75 5677
Q ss_pred HHHHHHHHHHHHH
Q 014905 203 AAACFLAFGMVII 215 (416)
Q Consensus 203 ~~~~~~~~~~~~~ 215 (416)
..+.+.++..++.
T Consensus 363 ~~~~~~~~~~~~~ 375 (382)
T TIGR00902 363 FMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 7777766655443
No 131
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.39 E-value=7.3e-11 Score=110.81 Aligned_cols=288 Identities=17% Similarity=0.155 Sum_probs=175.7
Q ss_pred HHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhhh--hhhhhhhhhhhhhhh---cc
Q 014905 81 GFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCVTKHSSEYKILMLGRIFGGIAT--SLLFSAFESWLVAEH---NK 155 (416)
Q Consensus 81 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~~i~e~---~~ 155 (416)
..+...+.++..|.++||+|||..+........+..++.....+|.++ +.++.. +.......+ +++|. ++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a-~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFA-YVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhh-heeeccchhH
Confidence 367888999999999999999999999988877776632333344443 344322 233444455 77766 55
Q ss_pred cCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCCccchh-----
Q 014905 156 RGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGDPEKKN----- 230 (416)
Q Consensus 156 r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 230 (416)
|....++++..+..+. .++|.+++...+.. |.-.+|.+..+..++..+......||+..++++++
T Consensus 146 R~~~~gll~~~~~~~~--------~~~p~~~~~~~~~~--~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~ 215 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGL--------VIGPALGGYLVKFL--GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE 215 (463)
T ss_pred HHHHHHHHHHHHHHHH--------hHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc
Confidence 6665444444333333 56667888887776 89999999999999999888878888765544331
Q ss_pred ------hHHHhhhHHHhhh---cchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhH
Q 014905 231 ------LLAQFKGAALAIA---SDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSS 298 (416)
Q Consensus 231 ------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~ 298 (416)
...+..+.++... ++|..+.+.....+.......-.....+.|.....+.+ .+...+.......++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l 295 (463)
T KOG2816|consen 216 LTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQL 295 (463)
T ss_pred cCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHH
Confidence 0111112222222 23444444443333322221101102355666555554 56566666666666665
Q ss_pred HHH-HHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhc
Q 014905 299 FAS-RLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQ 377 (416)
Q Consensus 299 ~~~-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 377 (416)
+.. .+.+. .+.++....+...-........+.. +.|.. ..........+...|...+..+.
T Consensus 296 ~~~~~l~~~--l~~~~~i~lGl~~~~~~~~~~af~~---------------~~w~~-~~~~v~~~~~~~~~pa~~s~~s~ 357 (463)
T KOG2816|consen 296 LLLPLLSSI--LGEKRLISLGLLSEFLQLLLFAFAT---------------ETWMM-FAAGVVVALAGIVFPAIRAFASI 357 (463)
T ss_pred HHHHHHHHH--HhhhhHhhHHHHHHHHHHHHHHHhc---------------cchhh-hHHHHHHHhhcchhHHHHhHHHh
Confidence 555 44444 5666655555554444444443333 33433 34445556667789999999999
Q ss_pred cCCccccceeeeeeecccceeeee
Q 014905 378 YIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 378 ~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+++++||+++++.....++...+
T Consensus 358 ~v~~~e~g~v~~~is~i~~l~~~~ 381 (463)
T KOG2816|consen 358 LVSPEEQGKVFGIISGIEGLSGVV 381 (463)
T ss_pred hcccccccchhhHHHHHHHHhhhh
Confidence 999999999999887766665444
No 132
>PRK12382 putative transporter; Provisional
Probab=99.38 E-value=9.8e-11 Score=110.01 Aligned_cols=154 Identities=21% Similarity=0.279 Sum_probs=112.3
Q ss_pred HHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHH
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILM 128 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~ 128 (416)
.+......+. +.+ ++.|.++ .+...+...++..+++++.|++.||+||||.+..+.....++.+ ....++.+...
T Consensus 230 ~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (392)
T PRK12382 230 VGFAVIGTFV-SLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVAL 306 (392)
T ss_pred HHHhHHHHHH-HHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHH
Confidence 3344444555 445 6777654 45566677788889999999999999999999988877777766 66677888888
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
+..++.|++.+...+...+ .+.|. ++|++..+.. +....+|. .++|.+.+.+.+.. ||+..|.+.+
T Consensus 307 ~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~----~~~~~~g~----~ig~~~~g~l~~~~--g~~~~~~~~~ 375 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGV-EVVKRVPSQVRGTALGGY----AAFQDIAY----GVSGPLAGMLATSF--GYPSVFLAGA 375 (392)
T ss_pred HHHHHHHHHHHhHHHHHHH-HHHHhcCHHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHh--CchHHHHHHH
Confidence 8899999998887776666 55544 5667664443 33333444 67778888888877 9999999988
Q ss_pred HHHHHHHHHHHHh
Q 014905 206 CFLAFGMVIILAS 218 (416)
Q Consensus 206 ~~~~~~~~~~~~~ 218 (416)
.+.++..+.....
T Consensus 376 ~~~~~~~~~~~~~ 388 (392)
T PRK12382 376 ISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHhh
Confidence 8887777666533
No 133
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=7.1e-11 Score=110.98 Aligned_cols=154 Identities=12% Similarity=0.078 Sum_probs=109.7
Q ss_pred HHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHH
Q 014905 51 AGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKIL 127 (416)
Q Consensus 51 ~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l 127 (416)
........++ |.| +++|+|+.+.+.+.+...++..++.+..|+++||++||+.+........+... ....++.+.+
T Consensus 219 ~~~~~~~~~~-p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 297 (394)
T PRK03699 219 LAQLTFISWV-PEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHL 297 (394)
T ss_pred HHHHHHHHHH-HHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 3344444566 555 57899999999999999999999999999999999999998877666655555 4456677667
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 128 MLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
.+..++.|++.+...+...+ ...|. ++++.. . +.......+|. .++|.+.+.+.+.. |++..++..+
T Consensus 298 ~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~---~-g~~~~~~~~g~----~i~p~~~G~l~~~~--g~~~~~~~~~ 366 (394)
T PRK03699 298 LYAILGLGFFSSAIYTTIIT-LGSQQTKVASPKL---V-NFILTCGTIGT----MLTFVVTSPIVAHF--GLQAALLTAN 366 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHccCCCHHH---H-HHHHHhhhHHH----HHHHHHHHHHHHHh--CchhhhhhhH
Confidence 77778888887777776565 55554 223333 2 22222222344 88889999888876 9999998888
Q ss_pred HHHHHHHHHHH
Q 014905 206 CFLAFGMVIIL 216 (416)
Q Consensus 206 ~~~~~~~~~~~ 216 (416)
+...+......
T Consensus 367 ~~~~~~~~~~~ 377 (394)
T PRK03699 367 GLYAVVFVMCI 377 (394)
T ss_pred HHHHHHHHHHH
Confidence 77776655443
No 134
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=2.7e-10 Score=108.52 Aligned_cols=160 Identities=15% Similarity=0.089 Sum_probs=103.5
Q ss_pred HHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc----cchhH
Q 014905 52 GDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK----HSSEY 124 (416)
Q Consensus 52 ~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~----~~~~~ 124 (416)
+.+....+. |.| +++|.++++...+.....+...++.+..|+++||+|||+.+..+.+...++.+ .. ..++.
T Consensus 265 ~~~~~~~~~-~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (438)
T PRK09952 265 TMYIVTAFA-LNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIF 343 (438)
T ss_pred HHHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChH
Confidence 344445566 445 57888887766666666677788899999999999999998887665544432 21 12234
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHH
Q 014905 125 KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPF 201 (416)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f 201 (416)
+.+++..++.+++.+...+...+ +++|. +.|+.. .+..++.+ ..+++.++|.+.+.+.+..+.+|+.++
T Consensus 344 ~~~~~~~~l~~~~~~~~~~~~~~-~~~e~~p~~~r~tg---~g~~~~~~----~~lgg~~~p~i~g~l~~~~~~~~~~~~ 415 (438)
T PRK09952 344 WIVFFSIMLANIAHDMVVCVQQP-MFTEMFGASYRYSG---AGVGYQVA----SVVGGGFTPFIAAALVTYFGGSWHSVA 415 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCcchhHHH---HhHHHHHH----HHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 45555666777777776666667 77776 333333 21223333 334448888888888775433588888
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q 014905 202 DAAACFLAFGMVIILASWTE 221 (416)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~ 221 (416)
...++..++..+... ..+|
T Consensus 416 ~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 416 IYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHH-Hccc
Confidence 877777777766655 4454
No 135
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.35 E-value=1.1e-10 Score=108.86 Aligned_cols=143 Identities=15% Similarity=0.108 Sum_probs=104.7
Q ss_pred HHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchh--HHHHHHHHHH
Q 014905 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSE--YKILMLGRIF 133 (416)
Q Consensus 58 ~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~--~~~l~~~r~l 133 (416)
.+. +.+ +++|.++.+.+.+.+...++..+++++.|+++||+|||+.+.++.....++.+ ....++ ...++...++
T Consensus 226 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 226 GLY-KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 344 445 78999999999999999999999999999999999999999988777777666 444443 2334456677
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
.|++.+...+.... ++.|. ++|+...+.. .....+|. .++|.+.+.+.+.. ||+..|.+.+++.++
T Consensus 305 ~g~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~----~~~~~~g~----~~~~~~~g~l~~~~--g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 305 VFFTWGGTISLFPS-LVSDIFGPANSAANYGFL----YTAKAVAG----IFGGLIASHALTEI--GFEYTFIVTGAFALT 373 (377)
T ss_pred HHHHhccchhccHH-HHHHHhhhhhhhhHhHHH----HHHHHHHH----HHHHHHHHHHHhhh--chhhHHHHHHHHHHH
Confidence 78877766665566 66655 6677764444 33333444 77778888877776 999999888877665
Q ss_pred HH
Q 014905 211 GM 212 (416)
Q Consensus 211 ~~ 212 (416)
+.
T Consensus 374 ~~ 375 (377)
T TIGR00890 374 SL 375 (377)
T ss_pred hc
Confidence 43
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.35 E-value=1.8e-10 Score=109.21 Aligned_cols=154 Identities=16% Similarity=0.057 Sum_probs=113.7
Q ss_pred HHHHHHH-HH-cCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHH
Q 014905 58 PYVYYLY-ST-YGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFG 134 (416)
Q Consensus 58 ~~l~~l~-~~-~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~ 134 (416)
.++ |.| ++ +|.++.+.|++.+...++..++.++.|++.||.++|+.+..+.....++.+ ....++.+...+..++.
T Consensus 244 ~~~-p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 244 VLY-PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred Hhh-HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 344 556 55 899999999999999999999999999999998888888888777777766 66777888788888888
Q ss_pred Hhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFG 211 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~ 211 (416)
|++.+...+...+ ++.|. +.|++..+.. .....+|. .++|.+.+.+.+.. |++..+...+...++.
T Consensus 323 g~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~----~~~~~~g~----~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~ 391 (417)
T PRK10489 323 GYLSAISSLLQYT-LLQTQTPDEMLGRINGLW----TAQNVTGD----AIGAALLGGLGAMM--TPVASASASGFGLLII 391 (417)
T ss_pred HHHHHHHHHHHHH-HHHhhCCHHHHHHHHHHH----HHHHhhhH----hHHHHHHHHHHHHh--chhhHHHHHHHHHHHH
Confidence 9888776665556 66654 5577774444 33333444 66677777777776 8888888777766665
Q ss_pred HHHHHHhcccCC
Q 014905 212 MVIILASWTENY 223 (416)
Q Consensus 212 ~~~~~~~~~~~~ 223 (416)
........+|.+
T Consensus 392 ~~~~~~~~~~~~ 403 (417)
T PRK10489 392 GVLLLLVLGELR 403 (417)
T ss_pred HHHHHHhccccc
Confidence 555554555544
No 137
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.33 E-value=1.1e-11 Score=98.03 Aligned_cols=133 Identities=24% Similarity=0.359 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---
Q 014905 78 FIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH--- 153 (416)
Q Consensus 78 ~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--- 153 (416)
.+...++..+++++.|++.||+|||+.+..+.....++.+ ....++++.+.+.+++.|++.+...+...+ ++.|.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA-LIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHCCh
Confidence 3455678889999999999999999999998888777777 667788999999999999999988887777 77766
Q ss_pred cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhccc
Q 014905 154 NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTE 221 (416)
Q Consensus 154 ~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 221 (416)
++|++..+.. .....+|. .+++.+.+.+.+.. +|+..+.+.+...++..+......||
T Consensus 83 ~~~~~~~~~~----~~~~~~g~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLM----SAGIALGP----LLGPPLGGVLAQFL--GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHH----HHhHHHHH----HHhHHhHHHHhccc--chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 5566664443 33333444 66667777777665 89999998888777777666645544
No 138
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.33 E-value=5e-10 Score=104.79 Aligned_cols=153 Identities=14% Similarity=0.090 Sum_probs=113.0
Q ss_pred HHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHH
Q 014905 50 MAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKIL 127 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l 127 (416)
.........+. |.| ++.|.++.+.|.+.+...+...+..++.|++.||+|+|+.+..+.....++.+ ....++++.+
T Consensus 218 ~~~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 296 (382)
T PRK11128 218 QGSHAAYYGFS-AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWL 296 (382)
T ss_pred HHHhHhHHHHH-HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 33444444565 556 88999999999999999999999999999999999999999999888887777 6678899999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHH-HHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHH
Q 014905 128 MLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFS-KAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAA 204 (416)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~-~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~ 204 (416)
++..++.|++.+...+.... ++.+. +++++. . +..+ .....|. .++|.+++.+.|.. ++ ..++..
T Consensus 297 ~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~---~-~~~~~~~~~~g~----~ig~~i~G~l~~~~--g~-~~~~~~ 364 (382)
T PRK11128 297 IVIQILHCGTFTVCHLAAMR-YIAARPGSEVIRL---Q-ALYSALAMGGSI----AIMTVLSGFLYQHL--GA-GVFWVM 364 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCHhhhHHH---H-HHHHHHHHHHHH----HHHHHHHHHHHHhc--cH-HHHHHH
Confidence 99999999999888777777 66654 222222 2 2222 3233333 78889999999886 76 466666
Q ss_pred HHHHHHHHHHH
Q 014905 205 ACFLAFGMVII 215 (416)
Q Consensus 205 ~~~~~~~~~~~ 215 (416)
+.+.++.+...
T Consensus 365 ~~~~~~~~~~~ 375 (382)
T PRK11128 365 ALVALPALFIR 375 (382)
T ss_pred HHHHHHHHHHH
Confidence 66655554443
No 139
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=3e-10 Score=107.28 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=107.7
Q ss_pred hHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHH
Q 014905 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRI 132 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~ 132 (416)
....+. |.+ ++.|.++.+.+.+.+...++..++.++.|+++||+|||+.+..+.....++.+ ....++.+.+.+..+
T Consensus 238 ~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 238 FLLNWL-PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHH-HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 333345 555 78899999999999999999999999999999999999998887666666555 555667777777778
Q ss_pred HHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
+.|++.+...+...+ +..|. ++|++..+..+... .+|. .++|.+.+.+.+.. .+|...+.......+
T Consensus 317 ~~g~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~~~~----~~g~----~~g~~~~g~l~~~~-~~~~~~~~~~~~~~~ 386 (406)
T PRK11551 317 AAGLFVVGGQSVLYA-LAPLFYPTQVRGTGVGAAVAVG----RLGS----MAGPLLAGQLLALG-RSTVGVIGASIPVIL 386 (406)
T ss_pred HHHHHHHhHHHHHHH-HHHHHcchhhhhhhhhHHHHhh----hHHH----HHHhhhHhhhhccC-CchHHHHHHHHHHHH
Confidence 888877766666666 66655 56777644443332 3334 66777777777653 255666666665655
Q ss_pred HHHHHHHHh
Q 014905 210 FGMVIILAS 218 (416)
Q Consensus 210 ~~~~~~~~~ 218 (416)
+..++.+..
T Consensus 387 ~~~~~~~~~ 395 (406)
T PRK11551 387 VAALAALLL 395 (406)
T ss_pred HHHHHHHHH
Confidence 555555433
No 140
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.30 E-value=1.5e-08 Score=92.53 Aligned_cols=334 Identities=13% Similarity=0.108 Sum_probs=197.9
Q ss_pred hhhHHHHHHHHHHHHHHH-hHHHHHHHHH-H-HcCCChhhH-HHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHH
Q 014905 37 SFMNSYIIVYSLMMAGDW-LQGPYVYYLY-S-TYGFGKGEI-GQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITY 112 (416)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~-~~~~~l~~l~-~-~~~~s~~~~-g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~ 112 (416)
+|++....+.....+.+. =.-|++.|.. + +.|+++.|+ .-++-...-.++...++...+.|..+.|++++++.+..
T Consensus 2 ~w~~~~~llc~~gf~~~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~ 81 (412)
T PF01770_consen 2 SWKKITLLLCLFGFFKEFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSY 81 (412)
T ss_pred CchHHHHHHHHHHHHHhcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 354444444433322222 2347774544 3 489999888 46666666677788889999999999999999998888
Q ss_pred Hhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhh---hhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 014905 113 MLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVA---EHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL 188 (416)
Q Consensus 113 ~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~---e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 188 (416)
.+... ..+.++.+.+-+..+..|++.+.... ..+ ++- |.++-.+.. +....+...|. .++..+|+.
T Consensus 82 i~t~~lll~~~sv~~mq~~q~~yg~~~a~eva-y~s-Yiys~v~~~~yq~vt----s~~raa~l~g~----~~s~~lgQl 151 (412)
T PF01770_consen 82 IITWLLLLFGTSVLAMQLMQFFYGLATAAEVA-YYS-YIYSVVDKEHYQKVT----SYTRAATLVGR----FISSLLGQL 151 (412)
T ss_pred HHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHH-HHH-HheeecCHHHHHHHH----HHHHHHHHHHH----HHHHHHHHH
Confidence 77777 77889999999999999998886543 333 443 222223332 22333344445 444455555
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCC------C------------cc--c-hhh-----------H----
Q 014905 189 LVDTLALGPVAPFDAAACFLAFGMVIILASWTENYG------D------------PE--K-KNL-----------L---- 232 (416)
Q Consensus 189 ~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~------~------------~~--~-~~~-----------~---- 232 (416)
+......+++....+......++.+..+++ |..++ + ++ + ++. +
T Consensus 152 lvs~~~~sy~~L~~isl~~~~~a~~~~~fL-P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (412)
T PF01770_consen 152 LVSFGGVSYFQLNYISLASVSLALLIALFL-PMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRK 230 (412)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCcccceeccCccccccccccccccccccccccccccCcccccchHH
Confidence 554322356666666666555555555433 22110 0 00 0 000 0
Q ss_pred ---HHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccC----CCCCchHHHHHHHHHHHHHhhHHHHHHhh
Q 014905 233 ---AQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPN----DEEIPHGFIFATFMLASMLGSSFASRLLA 305 (416)
Q Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 305 (416)
+...+.+++..++|+++...+-..+...+.+....+....+... ....-.|.+-+...+.+.++++..|++..
T Consensus 231 ~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~ 310 (412)
T PF01770_consen 231 SVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKV 310 (412)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhc
Confidence 00112344455667766665544444444433333222222211 12223788888888888888999998854
Q ss_pred cccccchhHH--HHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccc
Q 014905 306 HSSLRVESYM--QIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEA 383 (416)
Q Consensus 306 r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~ 383 (416)
+ +.....+ .....+.+.++. ...... +.|......+++...+.+..+....-++....+|.
T Consensus 311 ~--w~~~~~l~l~~~S~l~a~~L~-lm~~t~--------------~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~ 373 (412)
T PF01770_consen 311 N--WDRWGELALGVFSLLQAGLLF-LMSFTG--------------NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEER 373 (412)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHH-HHHHhh--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 4 3322222 222223332222 223332 78999999999999999888888888999999999
Q ss_pred cceeeeeeeccccee
Q 014905 384 RSTIMNFFRIPLNVF 398 (416)
Q Consensus 384 rg~~~g~~~~~~~~~ 398 (416)
-|-++|+..+..-+.
T Consensus 374 yaLVFGiNtf~Al~L 388 (412)
T PF01770_consen 374 YALVFGINTFVALVL 388 (412)
T ss_pred eeeeeeeHHHHHHHH
Confidence 999999876554443
No 141
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.30 E-value=1.2e-09 Score=102.54 Aligned_cols=164 Identities=13% Similarity=0.062 Sum_probs=107.0
Q ss_pred HHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc-cchhHHH
Q 014905 49 MMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK-HSSEYKI 126 (416)
Q Consensus 49 ~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~-~~~~~~~ 126 (416)
...+......++++..+++|.|..+.|...+...++..++.+..|++.||+|||+.+..+..+..++.. .. ..++...
T Consensus 217 ~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 217 INGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 334444444566333477899999999999999999999999999999999999998888766666554 22 2333222
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
+. -++.|++.+...+.... ...+. ++++.. .+.....+ .++. .++|.+.+++.+.. .+|...|.
T Consensus 297 ~~--~~l~g~g~g~~~~~~~~-~~~~~~~~~~~~g~~---~g~~~~~~-~~~~----~~gp~~~G~l~~~~-g~~~~~~~ 364 (393)
T PRK09705 297 LW--AMVCGLGLGGAFPLCLL-LALDHSVQPAIAGKL---VAFMQGIG-FIIA----GLAPWFSGVLRSIS-GNYLMDWA 364 (393)
T ss_pred HH--HHHHHHhccchHHHHHH-HHHhhcCCHHHHHHH---HHHHHHHH-HHHH----HHHHHHHHHHHHHh-CCchHHHH
Confidence 22 24567777766665554 43333 233443 21222222 2223 67888888888876 24888888
Q ss_pred HHHHHHHHHHHHHHHhcccCCC
Q 014905 203 AAACFLAFGMVIILASWTENYG 224 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~ 224 (416)
+.++..++.........||++.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 365 FHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHHHhcccccc
Confidence 8887777776666656666553
No 142
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.30 E-value=1e-09 Score=103.44 Aligned_cols=149 Identities=12% Similarity=0.170 Sum_probs=103.7
Q ss_pred hHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHH-HHHHHHHhhhh-h-----ccchhHHH
Q 014905 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACV-TYCITYMLSCV-T-----KHSSEYKI 126 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~-~~~~~~~~~~l-~-----~~~~~~~~ 126 (416)
....+. |.| +++|.|+.+.+.+.+...++..++.+..|+++||+|||+.+. .+.+...+..+ . ...++.+.
T Consensus 240 ~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 240 GFAVFL-PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHH-HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 334456 666 889999999999999999999999999999999999988764 23222222221 1 12346677
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAA 204 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~ 204 (416)
..+..++.|++.+...+ ... .+.|. ++|+...+. .+....+|. .++|.+.+.+.+.. ||+..+++.
T Consensus 319 ~~~~~~~~G~~~~~~~~-~~~-~~~~~~~~~~g~~~g~----~~~~~~lg~----~~gp~i~g~l~~~~--g~~~~~~~~ 386 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVP-LAA-VFPTLAPKHKGAAMSV----LNLSAGLSA----FLAPAIAVLFIGFF--GAIGVVWIF 386 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHH-HHHhhCcchhHHHHHH----HHHHHHHHH----HHHHHHHHHHHhhc--chHHHHHHH
Confidence 77788888888776544 334 44544 556666333 344444444 77888888888876 999999998
Q ss_pred HHHHHHHHHHHH
Q 014905 205 ACFLAFGMVIIL 216 (416)
Q Consensus 205 ~~~~~~~~~~~~ 216 (416)
+++.++..++..
T Consensus 387 a~~~~i~~~~~~ 398 (402)
T TIGR00897 387 AALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHH
Confidence 888777666554
No 143
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.27 E-value=6.4e-10 Score=104.30 Aligned_cols=148 Identities=15% Similarity=0.135 Sum_probs=103.0
Q ss_pred HHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh-h--hhh--ccchh
Q 014905 51 AGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML-S--CVT--KHSSE 123 (416)
Q Consensus 51 ~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~--~l~--~~~~~ 123 (416)
........++ |.| +++|.++.+.+.+.+...++..++.++.|+++||+|||+.+........+ + ... ...++
T Consensus 233 ~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (394)
T TIGR00883 233 TTFYLITTYL-PTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGS 311 (394)
T ss_pred HHHHHHHHHH-HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3334445566 545 67899999999999999999999999999999999999987755433322 2 111 12346
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC-chh
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG-PVA 199 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~-w~~ 199 (416)
.+.+....++.|++.+...+...+ ++.|. ++|+...+. .++.+..+|. .++|.+++.+.+.. | |+.
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~---~~~~~~~~g~----~~~p~~~g~l~~~~--g~~~~ 381 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGS-FLPELFPTEVRYTGASL---AYNLAGAIFG----GFAPYIAAALVAMT--GDWYA 381 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCccceeeEeee---hhHhHHHHHh----hHHHHHHHHHHHHc--Ccchh
Confidence 677777788888888888887777 77766 556666332 2334444444 78888888888876 6 887
Q ss_pred HHHHHHHHHH
Q 014905 200 PFDAAACFLA 209 (416)
Q Consensus 200 ~f~~~~~~~~ 209 (416)
.++......+
T Consensus 382 ~~~~~~~~~l 391 (394)
T TIGR00883 382 IGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHH
Confidence 7666555443
No 144
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.25 E-value=9.2e-10 Score=105.85 Aligned_cols=150 Identities=13% Similarity=0.036 Sum_probs=97.5
Q ss_pred HHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhh--h-hccchhHHHHHHH
Q 014905 56 QGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSC--V-TKHSSEYKILMLG 130 (416)
Q Consensus 56 ~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~--l-~~~~~~~~~l~~~ 130 (416)
...++ |.| +++|+|..+.++..+...++..++.+..|+++||+|||+.+.........+. + ....++.+...+.
T Consensus 277 ~~~~~-p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (467)
T PRK09556 277 IDNWS-PVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLAS 355 (467)
T ss_pred HHHHH-HHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 34455 655 5799999999999999999999999999999999999987766543333222 2 2234466666677
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh------------hhcc
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD------------TLAL 195 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~------------~~~~ 195 (416)
+++.|+........... ...|. +.|+.+.+..+ ..|...+..++|.+.+.+.+ ..
T Consensus 356 ~~~~G~~~~~~~~~~~~-~~~~~~p~~~~g~a~gi~~-------~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-- 425 (467)
T PRK09556 356 LFALGFLVFGPQLLIGV-AAVGFVPKKAIGVANGIKG-------TFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-- 425 (467)
T ss_pred HHHHHHHHhhHHHHHHH-HHHhhcchhhHHHHHHHHH-------HHHHHHhHHHHhhhHHHHhccccccccccccccc--
Confidence 78877643322222223 33344 45566633331 22222233677777777777 33
Q ss_pred CchhHHHHHHHHHHHHHHHHH
Q 014905 196 GPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~ 216 (416)
+|+..|.+..+..+++.+...
T Consensus 426 ~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 426 GWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ChHHHHHHHHHHHHHHHHHHH
Confidence 799999888777777655554
No 145
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.25 E-value=1.8e-08 Score=97.30 Aligned_cols=160 Identities=16% Similarity=0.197 Sum_probs=98.1
Q ss_pred HHHHhHHHHHHHHH-HHcCCChhhHHHHHH-HHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----hccc-hh
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKGEIGQLFI-AGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----TKHS-SE 123 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~-~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~~~~-~~ 123 (416)
.++.......+|.+ +++|+|++++|++.. ...++..++.+..|+++||+|||+.+.++.+...+..+ .... ++
T Consensus 236 ~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~ 315 (491)
T PRK11010 236 LGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKN 315 (491)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34433333443444 679999999999984 66789999999999999999999887766554343222 1222 34
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA 203 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~ 203 (416)
.+.+...-++..+..+...+...+ +..+..++....... +..+....+|. .+++.+.+.+.+.. ||+..|.+
T Consensus 316 ~~~l~~~~~l~~~~~g~~~~~~~a-~~~~l~~~~~~~t~~-gl~~s~~~lg~----~~~~~~~G~l~~~~--G~~~~f~~ 387 (491)
T PRK11010 316 LYSMGAAVFFENLCGGMGTAAFVA-LLMTLCNKSFSATQF-ALLSALSAVGR----VYVGPVAGWFVEAH--GWPTFYLF 387 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCcHHHH-HHHHHHHHHHH----HHHHHHHHHHHHHh--ChHHHHHH
Confidence 544444555544444433443344 444442222221112 22222223333 56666788888876 99999999
Q ss_pred HHHHHHHHHHHHHHh
Q 014905 204 AACFLAFGMVIILAS 218 (416)
Q Consensus 204 ~~~~~~~~~~~~~~~ 218 (416)
.+++.++..+.....
T Consensus 388 ~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 388 SVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877766644
No 146
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.24 E-value=3.1e-09 Score=99.79 Aligned_cols=155 Identities=17% Similarity=0.118 Sum_probs=99.5
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHH-HHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc-----
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFG-SSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK----- 119 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~-~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~----- 119 (416)
+...+......+. +.| +|.|++++++|++...... ...++.++.|++.||+|+|+.+..+........+ ..
T Consensus 219 l~~~~~~~~~~~~-~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (390)
T TIGR02718 219 LSAMTAVSGFGLS-KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAF 297 (390)
T ss_pred HHHHHHHHHHHHh-hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4444455555566 555 7899999999999888764 6667789999999999999998877655422222 11
Q ss_pred -cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc
Q 014905 120 -HSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA 194 (416)
Q Consensus 120 -~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~ 194 (416)
..++.+.+.....+.+++.+...+...+ ...+. ++++...+..+.. ..+|. .++|.+++.+.+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~----~~lg~----~~g~~~~G~l~~~~- 367 (390)
T TIGR02718 298 WLAPGIAVAWSCSAFGSLITGITSVAIYT-AFMRFAGDGDQAGTDVTAVQST----RDLGE----LIASSIAGYLTDRF- 367 (390)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcccchHHHHHHHHHH----HHHHH----HHHHHHHHHHHHHH-
Confidence 1233344444455555555655555555 44333 3344443333222 33444 77778888888876
Q ss_pred cCchhHHHHHHHHHHHHHHH
Q 014905 195 LGPVAPFDAAACFLAFGMVI 214 (416)
Q Consensus 195 ~~w~~~f~~~~~~~~~~~~~ 214 (416)
|++..|...+++.++..+.
T Consensus 368 -G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 368 -GYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred -ccHHHHHHHHHHHHHHHHH
Confidence 9999998888777665544
No 147
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.22 E-value=1.8e-09 Score=99.52 Aligned_cols=158 Identities=23% Similarity=0.277 Sum_probs=122.3
Q ss_pred HHHHHHHhHHHHHHHHHH-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchH-HHHHHHHHHHhhhh-hccchhH
Q 014905 48 LMMAGDWLQGPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKR-ACVTYCITYMLSCV-TKHSSEY 124 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~l-~~~~~~~ 124 (416)
...........+.++..+ .+|.++.+.+...+...++..++.++.|++.||+|||+ .+..+.....++.+ ....++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 265 (352)
T cd06174 186 LLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSL 265 (352)
T ss_pred HHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccH
Confidence 444444555556633334 45999999999999999999999999999999999999 99999888888877 7777788
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHH
Q 014905 125 KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPF 201 (416)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f 201 (416)
+...+..++.|++.+...+...+ ++.|. ++|++..+ ..+....+|. .+++.+.+.+.+.. +|+..+
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~----~i~~~i~g~l~~~~--~~~~~~ 334 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLT-LASELAPPEARGTASG----LFNTFGSLGG----ALGPLLAGLLLDTG--GYGGVF 334 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHH-HHHhhcCHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHHhccc--CcchHH
Confidence 89999999999999998888888 77766 55666533 3333334444 67777888777665 999999
Q ss_pred HHHHHHHHHHHHHHH
Q 014905 202 DAAACFLAFGMVIIL 216 (416)
Q Consensus 202 ~~~~~~~~~~~~~~~ 216 (416)
.+.+++.++..+...
T Consensus 335 ~~~~~~~~i~~i~~~ 349 (352)
T cd06174 335 LILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHhe
Confidence 999888887766543
No 148
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.21 E-value=5.2e-09 Score=97.95 Aligned_cols=151 Identities=15% Similarity=0.053 Sum_probs=99.8
Q ss_pred HHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-h-ccchhHHHHHHHHHHH
Q 014905 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-T-KHSSEYKILMLGRIFG 134 (416)
Q Consensus 58 ~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~-~~~~~~~~l~~~r~l~ 134 (416)
.+++|.+ +++|.|+.+.+++.+...++..++.++.|++.||+|+|+.+..+.....++.+ . ...++.+...+..++.
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFIC 299 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3443545 56899999999999999999999999999999999999999888777777655 3 2344555566666666
Q ss_pred HhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVI 214 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~ 214 (416)
+.+.....++... ...+...+++..+.. .......+|. .++|.+++.+.+.. .+|+..+.+.++...+....
T Consensus 300 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~g~----~~Gp~~~G~l~~~~-~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 300 CAGLFALSAPLQI-LLLQNAKGGELLGAA--GGQIAFNLGS----AIGAYCGGMMLTLG-LAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHHhhhHHHHH-HHHHhCCcchHHHHH--HHHHHHHHHH----HHHHHHhHHHHHcc-cCcchHHHHHHHHHHHHHHH
Confidence 6665544444343 223222222221111 1122233444 88889999888752 37999998887766665554
Q ss_pred HH
Q 014905 215 IL 216 (416)
Q Consensus 215 ~~ 216 (416)
..
T Consensus 372 ~~ 373 (382)
T PRK10091 372 LL 373 (382)
T ss_pred HH
Confidence 44
No 149
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=4e-09 Score=99.21 Aligned_cols=140 Identities=12% Similarity=0.109 Sum_probs=103.2
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhh
Q 014905 68 GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFE 146 (416)
Q Consensus 68 ~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (416)
+.+..+.|.+.+...+...++.+..|++.||+|||+.+.++....++... ....++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667789999999999999999999999999999999998887777766 56778888888899999988765544344
Q ss_pred hhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHH
Q 014905 147 SWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVII 215 (416)
Q Consensus 147 ~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 215 (416)
. +..+. ++|..+.. ....++....+|. .+++.+++++.+.. ||+..|.+.+++.++..+..
T Consensus 330 ~-~~~~~~~~~~~at~-~~~~~~~~~~lg~----~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 K-YITSQFDVRLSATI-YLIGFQFAKQLAM----IFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred H-HHHHhCCcceEEEe-ehHHHHHHHHHHH----HHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHHHH
Confidence 4 44443 34433311 1111233334444 88889999999886 99999999888877666544
No 150
>PRK15075 citrate-proton symporter; Provisional
Probab=99.20 E-value=4.9e-09 Score=99.84 Aligned_cols=132 Identities=11% Similarity=0.126 Sum_probs=83.8
Q ss_pred HHhHHHHHHHHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh-hhh----hccchhHH
Q 014905 53 DWLQGPYVYYLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML-SCV----TKHSSEYK 125 (416)
Q Consensus 53 ~~~~~~~l~~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~l----~~~~~~~~ 125 (416)
......+. |.| + ++|.++.+.++......++..++.+..|+++||+|||+.++.+.....+ ... ....+++.
T Consensus 254 ~~~~~~~~-p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK15075 254 FYLITVYT-PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFA 332 (434)
T ss_pred HHHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 33445566 555 4 5899999999998888999999999999999999999988776433322 111 11223444
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
......++.+++.+...+.... +..|. +.|+...++ ..+.+..++. .++|.+.+.+.+..
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~-~~~e~~p~~~rg~~~g~---~~~~~~~~~g----~~~p~~~g~i~~~~ 395 (434)
T PRK15075 333 RMLAVELWLSFLYGSYNGAMVV-ALTEVMPAEVRTAGFSL---AYSLATAIFG----GFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhHHH-HHHHHCCCCccchheeH---HHHHHHHHHh----hhHHHHHHHHHHhc
Confidence 4444445556666555554445 66655 556665332 2333333323 66788888888876
No 151
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.19 E-value=2.4e-12 Score=123.80 Aligned_cols=334 Identities=13% Similarity=0.129 Sum_probs=3.0
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch---------------------
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS--------------------- 122 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~--------------------- 122 (416)
++++++.++.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.+++.+ ..+-+
T Consensus 31 rRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~ 110 (539)
T PF03137_consen 31 RRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSIS 110 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccc
Confidence 69999999999999999999999999999999998777777777776666554 21100
Q ss_pred -----------------------------hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHH
Q 014905 123 -----------------------------EYKILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFL 173 (416)
Q Consensus 123 -----------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~ 173 (416)
-++.++++.++.|+|....++...+ |+.|+-++....-.+ +.......+
T Consensus 111 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t-YiDDnv~~~~splYi-Gi~~~~~~l 188 (539)
T PF03137_consen 111 SNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT-YIDDNVSKKNSPLYI-GILYAMSIL 188 (539)
T ss_dssp -----------------------------------------SSS------------------------------------
T ss_pred cccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee-eeccccccccCccch-hhhhHHhhc
Confidence 1367888999999999999999999 999882222211113 444445556
Q ss_pred HhhHHHHHHHHHHHHHHhhh------------c----cCchhHHHHHHHHHHHHHHHHHHhcccCCCC---------ccc
Q 014905 174 GNGLVAIISGLFGNLLVDTL------------A----LGPVAPFDAAACFLAFGMVIILASWTENYGD---------PEK 228 (416)
Q Consensus 174 G~~~~~~~~~~l~~~~~~~~------------~----~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 228 (416)
|+++|.++|...-....|.. + ..|...|++.+.+.++..+....+.++-|+. +++
T Consensus 189 GPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~ 268 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSER 268 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhc
Confidence 66555555554432221110 0 1366777777777777766666443322221 000
Q ss_pred hh-------hH------------HHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHH
Q 014905 229 KN-------LL------------AQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIF 286 (416)
Q Consensus 229 ~~-------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~ 286 (416)
++ .+ ++.....+.+++||.+....+...........+.. +.|.|.+.+.+.+ ++.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~t-F~pKylE~QF~~sas~A~~l~ 347 (539)
T PF03137_consen 269 KEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFAT-FLPKYLESQFGLSASQASLLT 347 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHH
Confidence 00 00 01112345566777777776666655555555455 9999999887765 33333
Q ss_pred HHH-HHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHH--HHHhhccCCCC----------------------CC
Q 014905 287 ATF-MLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLI--PILTNFLETPP----------------------DV 341 (416)
Q Consensus 287 ~~~-~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------------------~~ 341 (416)
... ..+..+|.+++|.+.+|++.+.|+..........+.... ..+.....+.+ ++
T Consensus 348 G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~C 427 (539)
T PF03137_consen 348 GIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSC 427 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCC
Confidence 333 446678889999999997666666544433333322221 11211111100 00
Q ss_pred C----------CCCc---c-cc-hhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 342 R----------GGGI---S-LS-GSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 342 ~----------~~~~---~-~~-~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+ ..+. + ++ .....+.+.+..+..+..........-+.+|+++|+-+.|+..+...++..+
T Consensus 428 n~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~I 502 (539)
T PF03137_consen 428 NSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFI 502 (539)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCc
Confidence 0 0000 0 11 1222333333344445555555566669999999999999998877776554
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.19 E-value=5.9e-09 Score=100.18 Aligned_cols=146 Identities=19% Similarity=0.207 Sum_probs=114.3
Q ss_pred HHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHH
Q 014905 59 YVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGG 135 (416)
Q Consensus 59 ~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G 135 (416)
.+ |++ +++|.++...|++.++..+|.+++++..+++.+|+++++.+..+.+..+++.+ .+++++.+...+..++.|
T Consensus 240 Ll-Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G 318 (524)
T PF05977_consen 240 LL-PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAG 318 (524)
T ss_pred hh-hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 44 666 68999999999999999999999999999999999999999989888888888 889999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHH
Q 014905 136 IATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~ 212 (416)
++.........+ .+.+. +.||+..+..+.....+ . .+|..+.|.+.+.. |.+..+.+.++..++..
T Consensus 319 ~~~~~~~~~~~t-~~Q~~~P~~~~GRv~si~~~~~~g~----~----~lGsll~G~la~~~--g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 319 AAWIIANSSLNT-LVQLSVPDWVRGRVFSIYQMVFFGG----M----PLGSLLWGFLADHF--GVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHH-HHHHhCCHHHHhHHHHHHHHHHHHH----H----HHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHH
Confidence 998887776666 55433 67888855554443333 3 44446666777766 88888888777666655
Q ss_pred HHHH
Q 014905 213 VIIL 216 (416)
Q Consensus 213 ~~~~ 216 (416)
++..
T Consensus 388 ~~~~ 391 (524)
T PF05977_consen 388 LIAL 391 (524)
T ss_pred HHHH
Confidence 5544
No 153
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.19 E-value=1.4e-09 Score=102.69 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=184.0
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh---C--chHHHHHHHHHHHhhhh-hcc----chhHHHHHHH
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ---G--RKRACVTYCITYMLSCV-TKH----SSEYKILMLG 130 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~---G--rr~~l~~~~~~~~~~~l-~~~----~~~~~~l~~~ 130 (416)
+.+ +++|.|+++.....+...++..+ -++.|.++|.+ | ||+-++++.++..++.+ ... ..+.....+.
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 445 78999999999988888877655 67889999976 2 55555566555533333 222 2356666677
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhccc-CcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEHNKR-GFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~~~r-~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
-++..++.........+ ++.|..+| ....+-+++.......+|. +++..+++.+.+.. +++..|.+.+.+..
T Consensus 93 l~la~~g~a~~DV~aDa-~vvE~~~~~p~~~g~lqS~~~~~~~~G~----lv~~~l~G~l~~~~--~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 93 LFLASFGYAFADVAADA-LVVELARREPESRGDLQSFVWGVRSVGS----LVGSLLSGPLLDSF--GPQGVFLISAALPL 165 (433)
T ss_pred HHHHHHHHHHHHHhhhH-HHHHHhhcCCchhHHHHHHHHHHHHHHH----HHHHHhhhhhhhcC--CCeEEehHHHHHHH
Confidence 78888888888888888 88888222 2222223344444555556 66667777777776 88999988887777
Q ss_pred HHHHHHHHhcccCCCCccc------hh----h---HHHhhhHHHhhhcchhHHHHHH-HHHHHHHHHHHHHHhhhccccc
Q 014905 210 FGMVIILASWTENYGDPEK------KN----L---LAQFKGAALAIASDERIALLGA-IQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~------~~----~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
+..+......+|+++.+++ ++ . .++.....++.+++|.++...+ ..++....... .....-.+..
T Consensus 166 l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-~~a~~fy~~~ 244 (433)
T PF03092_consen 166 LMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSI-SSASSFYFQT 244 (433)
T ss_pred HHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCC-CCccEEEEEe
Confidence 7766555455542211100 00 0 1122234445555666665544 22211111110 0000001111
Q ss_pred CCCC---Cc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCccc
Q 014905 276 NDEE---IP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTN-FLETPPDVRGGGISL 348 (416)
Q Consensus 276 ~~~~---~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 348 (416)
+..+ .+ .+.......++.++|..+..+...+ .+.|+.......+.......-.... ..+..- +.+
T Consensus 245 ~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~--~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~-----Gi~- 316 (433)
T PF03092_consen 245 DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN--WSWRRIFVVTTLVSVLASLFDLLLVTRWNLDL-----GIP- 316 (433)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHhcccEEEEEEEeeee-----CcC-
Confidence 2222 33 4555555677788888888887777 5666665554444332222111111 100000 000
Q ss_pred chhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 349 SGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
+.+..+.--.+..+..++.+-+...+.+|+.|+...|+.+++.....|++...
T Consensus 317 d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~ 369 (433)
T PF03092_consen 317 DQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSV 369 (433)
T ss_pred CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHH
Confidence 11223334455566666666677788899999999999999887777776544
No 154
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.18 E-value=1e-08 Score=97.63 Aligned_cols=155 Identities=18% Similarity=0.105 Sum_probs=86.7
Q ss_pred HHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-h----ccchhHH
Q 014905 52 GDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-T----KHSSEYK 125 (416)
Q Consensus 52 ~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~----~~~~~~~ 125 (416)
..+....++++.+ +++|.+..+.+...+...+...+++++.|+++||+|||+.+.+......+... . ...++..
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPY 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 3344455663333 57899999999999988888899999999999999999988776543322221 1 1122333
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
..+..-.+.+...+...+.... +.+|. +.|+...++. ++.+..+ .....|.+.+.+. .. ..|...++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~-~~~e~fp~~~r~t~~g~~---~~~g~~~----~g~~~p~~~~~l~-~~-g~~~~~~~ 407 (432)
T PRK10406 338 AAFGLVMCALLIVSFYTSISGI-LKAEMFPAQVRALGVGLS---YAVANAL----FGGSAEYVALSLK-SI-GMETAFFW 407 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCccchhhhHH---HHHHHHH----HHhHHHHHHHHHH-Hh-CCCcHHHH
Confidence 2222222222222322333344 56666 5677763333 3333322 2234666666443 33 13655666
Q ss_pred HHHHHHHHHHHHHH
Q 014905 203 AAACFLAFGMVIIL 216 (416)
Q Consensus 203 ~~~~~~~~~~~~~~ 216 (416)
..++..++..+..+
T Consensus 408 ~~~~~~~i~~~~~~ 421 (432)
T PRK10406 408 YVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHH
Confidence 66565555555544
No 155
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.17 E-value=9e-08 Score=89.03 Aligned_cols=341 Identities=16% Similarity=0.096 Sum_probs=176.7
Q ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHH-HHcC-CChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh--
Q 014905 39 MNSYIIVYSLMMAGDWLQGPYVYYLY-STYG-FGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML-- 114 (416)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~-~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~-- 114 (416)
...++...++...++-+..-.. +++ .+.. -+---.+...-.-.+..+++++..|.+.||..|+++...+.+..-+
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~-~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAV-PLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 3455666668888888777555 666 4442 2323334444455677889999999999999999987766332211
Q ss_pred --hhh---hccc--h-------hHHHHHHHHHHHHhhhhhhhhhhhhhhhhh--h-----cccCcchhhHHHHHHHHHHH
Q 014905 115 --SCV---TKHS--S-------EYKILMLGRIFGGIATSLLFSAFESWLVAE--H-----NKRGFDQQWLSETFSKAIFL 173 (416)
Q Consensus 115 --~~l---~~~~--~-------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e--~-----~~r~~~~~~~~~~~~~~~~~ 173 (416)
++. ..+. + ....+++.-.+.|.-.... ..... ...| + +++....+-+|....---..
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La-s~~~~-iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA-SIANT-IAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH-Hhhhh-heeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 111 1011 1 1122222222222211111 11121 2222 2 22222222222333332333
Q ss_pred HhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh-------ccc---CCC--Cccch-hh---------
Q 014905 174 GNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILAS-------WTE---NYG--DPEKK-NL--------- 231 (416)
Q Consensus 174 G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~-------~~~---~~~--~~~~~-~~--------- 231 (416)
.. +++|++.+.+.+.. +.+....+.+...+++.+.-+.+ .|+ +++ +++++ +.
T Consensus 161 ck----llaPl~vG~l~t~~--s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~ 234 (432)
T PF06963_consen 161 CK----LLAPLFVGLLMTFA--SPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSD 234 (432)
T ss_pred HH----HHHHHHHHHHhhcc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccch
Confidence 35 88889988888765 77777776666666665543322 111 111 10000 00
Q ss_pred ---HHHhh-------hHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhH
Q 014905 232 ---LAQFK-------GAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSS 298 (416)
Q Consensus 232 ---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~ 298 (416)
.+..+ ++++..++++.+. ..+...+..+....+.. .+..|.... +.+ .|..-+...+.++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~w~~Y~~q~vfl-as~alalLY~TVLsf~~-lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~ 311 (432)
T PF06963_consen 235 PSILKRLWNPLRTIIRGWRTYFRQPVFL-ASFALALLYFTVLSFGG-LMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTW 311 (432)
T ss_pred hhHHHHHHHHHHHHhccHHHHHhCHHHH-HHHHHHHHHHHHhcCcH-HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 00111 1233333444333 33444444333333322 334444443 443 67777777888899999
Q ss_pred HHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhcc
Q 014905 299 FASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQY 378 (416)
Q Consensus 299 ~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 378 (416)
..+++.+| .|..|.-.++......++...........++. +.. +....+.+.++--++.=..-.....+++|.
T Consensus 312 ~~p~l~~r--iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~---~~~--s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~ 384 (432)
T PF06963_consen 312 VYPWLMKR--IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF---SSI--SAYLLLGGIALSRIGLWSFDLAVTQIMQEN 384 (432)
T ss_pred HHHHHHHH--hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc---hhh--HHHHHHHHHHHHHHHHHhhhHHHHHhhccc
Confidence 99999999 88888777776655444333322221111100 000 222233333333455555667778899999
Q ss_pred CCccccceeeeeeeccccee
Q 014905 379 IPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 379 ~p~~~rg~~~g~~~~~~~~~ 398 (416)
+|+++||+..|+-+...|++
T Consensus 385 V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 385 VPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred CCHHHhhHHHHHHHHHHHHH
Confidence 99999999999877666654
No 156
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.17 E-value=8.4e-09 Score=97.40 Aligned_cols=146 Identities=11% Similarity=-0.028 Sum_probs=95.7
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc-----chhHHHHHHHHHHHHhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH-----SSEYKILMLGRIFGGIAT 138 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~-----~~~~~~l~~~r~l~G~~~ 138 (416)
+++|.++.+.|+......++..++.+..|+++||+|+|+.+.++.+...++.. ... .++.+.+.+..++.|++.
T Consensus 244 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 323 (406)
T PRK15402 244 SGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGI 323 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 67899999999988888888999999999999999999998888766655544 222 235667778888899988
Q ss_pred hhhhhhhhhhhhh--hhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 014905 139 SLLFSAFESWLVA--EHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 139 ~~~~~~~~~~~i~--e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 216 (416)
+...+.... ... +.++|++..+.. +.....|. .+++.+++.+.+.. ++....+...+..++...+..
T Consensus 324 ~~~~~~~~~-~~~~~~~~~~g~~~~~~----~~~~~~~~----~~g~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK15402 324 GLANAGLYR-LTLFSSDVSKGTVSAAM----GMLSMLIF----TVGIELSKHAYLGG--GNGLFNLFNLANGLLWLLLVR 392 (406)
T ss_pred HHHhhhHHH-HHhhhccccccHHHHHH----HHHHHHHH----HHHHHHHHhcccCC--chHHHHHHHHHHHHHHHHHHH
Confidence 877665544 332 225667764443 44444444 55666777666554 555444444444444433333
Q ss_pred Hhccc
Q 014905 217 ASWTE 221 (416)
Q Consensus 217 ~~~~~ 221 (416)
.+.++
T Consensus 393 ~~~~~ 397 (406)
T PRK15402 393 IFLKD 397 (406)
T ss_pred HHhcc
Confidence 33333
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.16 E-value=1.9e-08 Score=95.70 Aligned_cols=148 Identities=14% Similarity=0.136 Sum_probs=117.5
Q ss_pred HHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCch--HHHHHHHHHHHhhhh-hcc--------chhHHHHH
Q 014905 62 YLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRK--RACVTYCITYMLSCV-TKH--------SSEYKILM 128 (416)
Q Consensus 62 ~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr--~~l~~~~~~~~~~~l-~~~--------~~~~~~l~ 128 (416)
.+| +++|++..+...+..+..+...++++.+|++.||+|.| ++++.+.....+..+ ..+ .++.+.+.
T Consensus 305 ~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~ 384 (477)
T PF11700_consen 305 GIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFW 384 (477)
T ss_pred HHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHH
Confidence 556 58999999999999999999999999999999999999 888888666644333 222 56778899
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
+.-++.|+..|...+...+ +.+|.-.+++....+ +.+++..-... .+||.+-+.+.+.. .+-|..+....++.
T Consensus 385 ~~a~~~G~~~G~~qs~sRs-~~~~LiP~g~e~efF-gly~i~gk~ss----~lGPll~g~i~~~t-g~~r~g~~~l~~lf 457 (477)
T PF11700_consen 385 VLAVLIGLFMGGIQSASRS-LFSRLIPPGREAEFF-GLYAITGKASS----WLGPLLFGLITDAT-GSQRYGFLFLLVLF 457 (477)
T ss_pred HHHHHHHHHhhhHHHHHHH-HHHHhCCCchhhHHH-HHHHHHHHHHH----HHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 9999999999999999999 999885555554445 55555444445 88888888888776 24888988888888
Q ss_pred HHHHHHHH
Q 014905 209 AFGMVIIL 216 (416)
Q Consensus 209 ~~~~~~~~ 216 (416)
++.+++..
T Consensus 458 ~~gl~ll~ 465 (477)
T PF11700_consen 458 LIGLILLF 465 (477)
T ss_pred HHHHHHHh
Confidence 88887776
No 158
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.16 E-value=1.5e-09 Score=105.02 Aligned_cols=278 Identities=14% Similarity=0.152 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhHHHHHH---HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh
Q 014905 42 YIIVYSLMMAGDWLQGPYVY---YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV 117 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~---~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l 117 (416)
++.+..+......+..-++. ... +.++++.++.|++.+.+-++..+...+..+..-|.-|-|.+-++++.++++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 34444444444444433332 223 68999999999999999999999999999999999888887777777766554
Q ss_pred -hccch-------------------------------------------------h--HH-HHHHHHHHHHhhhhhhhhh
Q 014905 118 -TKHSS-------------------------------------------------E--YK-ILMLGRIFGGIATSLLFSA 144 (416)
Q Consensus 118 -~~~~~-------------------------------------------------~--~~-~l~~~r~l~G~~~~~~~~~ 144 (416)
..+-+ + ++ +++++.++.|+|....++.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 32210 0 23 6777899999999999999
Q ss_pred hhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh-hc------------cCchhHHHHHHHHHHHH
Q 014905 145 FESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT-LA------------LGPVAPFDAAACFLAFG 211 (416)
Q Consensus 145 ~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~-~~------------~~w~~~f~~~~~~~~~~ 211 (416)
..+ |+.|..++....-.+ +.......+|+++|.++|.+....-.+. .. ..|..-|++.+.+.++.
T Consensus 258 Gis-YiDDnvk~~~SplYl-gi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 258 GIS-YIDDNVKKKNSPLYL-GILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred CCc-cccccccccCCcHHH-HHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 999 999883333322234 4445555677866666666655443333 10 13677788888888888
Q ss_pred HHHHHHhcccCCCCcc------------c-------hh---hHHHhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhh
Q 014905 212 MVIILASWTENYGDPE------------K-------KN---LLAQFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLW 269 (416)
Q Consensus 212 ~~~~~~~~~~~~~~~~------------~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (416)
.+..+++.++.+++.+ + ++ ..++.....+.+++||-+....+...+-...+..+.. +
T Consensus 336 a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t-F 414 (735)
T KOG3626|consen 336 AVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT-F 414 (735)
T ss_pred HHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH-h
Confidence 8887756444432210 0 00 0123344667788888888776666666666666555 9
Q ss_pred hcccccCCCCCch---HHHHHHH-HHHHHHhhHHHHHHhhcccccchhHHHHHHHHH
Q 014905 270 TPALSPNDEEIPH---GFIFATF-MLASMLGSSFASRLLAHSSLRVESYMQIVFIIS 322 (416)
Q Consensus 270 ~~~~~~~~~~~~~---g~~~~~~-~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 322 (416)
+|.|++.+.+.+. ..+.... ..+..+|..++|++.+|++.+.|....+.....
T Consensus 415 lPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 415 LPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred hHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 9999999888763 3333333 445567788999999997677776554444333
No 159
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=2.8e-08 Score=93.74 Aligned_cols=143 Identities=16% Similarity=0.204 Sum_probs=91.3
Q ss_pred HHH-HHcCCChhhHHHHHHHH-HHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----hccc-hhHHHHHHHHH--
Q 014905 62 YLY-STYGFGKGEIGQLFIAG-FGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----TKHS-SEYKILMLGRI-- 132 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~-~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~~~~-~~~~~l~~~r~-- 132 (416)
+.+ +++|+++++.|++.+.. .++..++.++.|++.||+|||+.+..+.....+..+ .... ++.+.+.+.-.
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 434 67999999999998664 456889999999999999999988776655544332 1233 45565555544
Q ss_pred --HHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 133 --FGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 133 --l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
..|++.+...+.... ++.+..+ +...+.. +....+|. ..++.+++.+.+.. ||+..|.+.+++.++
T Consensus 314 ~~~~g~~~~~~~~~~~~-~~~~~~~-~~~~~~~----~~~~~l~~----~~~~~~~G~l~~~~--G~~~~f~~~~~~~~~ 381 (402)
T PRK11902 314 NLCGGMGTAAFVALLMA-LCNRSFS-ATQYALL----SALASVGR----VYVGPTSGYLVEAY--GWPGFYLMTVVIALP 381 (402)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCCc-HHHHHHH----HHHHHHHH----HHHHHHHHHHHHHh--ChHHHHHHHHHHHHH
Confidence 344445544554444 4444311 1121222 21122333 44445788888887 999999999888888
Q ss_pred HHHHHH
Q 014905 211 GMVIIL 216 (416)
Q Consensus 211 ~~~~~~ 216 (416)
..++..
T Consensus 382 ~~~~~~ 387 (402)
T PRK11902 382 GLALLW 387 (402)
T ss_pred HHHHHH
Confidence 766665
No 160
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.14 E-value=4.7e-09 Score=104.51 Aligned_cols=136 Identities=18% Similarity=0.142 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 014905 75 GQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH 153 (416)
Q Consensus 75 g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (416)
.....+..++.+++.++.|+++||+|||++++++.++.+++.+ ..+.++...+++.+++.|+..+...+...+ +++|.
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a-~~aEl 676 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDV-LTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 3445566788899999999999999999999999888888877 667777777888888888887777777777 88876
Q ss_pred ---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCC
Q 014905 154 ---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENY 223 (416)
Q Consensus 154 ---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 223 (416)
+.|+...++.+. ...+|. +++|.+++.+.+. +...+|++.++..+++.++.. ..||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~----~~rlGa----iigp~i~g~L~~~---~~~~pf~i~a~~lll~~ll~~-~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNA----LCKAAA----VLGILIFGSFVGI---TKAAPILFASAALACGGLLAL-KLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHH----HHHHHH----HHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-hCCCCc
Confidence 667777444422 223334 6677777666554 556788888777777666665 557654
No 161
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=1.1e-08 Score=98.72 Aligned_cols=113 Identities=19% Similarity=0.236 Sum_probs=81.4
Q ss_pred HHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc---chhHHHHHHHHHHHH
Q 014905 62 YLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH---SSEYKILMLGRIFGG 135 (416)
Q Consensus 62 ~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~---~~~~~~l~~~r~l~G 135 (416)
|.| + .+|.++.+.+++.....++..++.++.|+++||+|||+++..+.....+..+ ... .++.+.+.+..++.|
T Consensus 285 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 285 PVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 666 5 5899999999999988888889999999999999999999988776665544 322 233444455667778
Q ss_pred hhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHh
Q 014905 136 IATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGN 175 (416)
Q Consensus 136 ~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~ 175 (416)
++.+...+.... +..+. ++++...+..+.....|..+|.
T Consensus 365 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 406 (471)
T PRK10504 365 MVNSTRFSSMNT-LTLKDLPDNLASSGNSLLSMIMQLSMSIGV 406 (471)
T ss_pred HHHHHHHHHHHH-HHHHcCCHHhccchHHHHHHHHHHHHHHHH
Confidence 887777776666 55543 6677776655555555555555
No 162
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.14 E-value=1.9e-08 Score=94.43 Aligned_cols=146 Identities=15% Similarity=0.187 Sum_probs=101.0
Q ss_pred HHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHH-HHhhhh-hccchhHHHHHHHHHHH
Q 014905 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCIT-YMLSCV-TKHSSEYKILMLGRIFG 134 (416)
Q Consensus 58 ~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~-~~~~~l-~~~~~~~~~l~~~r~l~ 134 (416)
.+++|.+ +++|+++.+.+.+.....++..++.++.|++.||.+ |+.++.+... .....+ ....++.+.+.+..++.
T Consensus 237 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 315 (394)
T PRK10213 237 TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIW 315 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3444667 788999999999999999999999999999999965 4444444333 333333 34556777888888999
Q ss_pred Hhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~ 212 (416)
|++.+...+...+ ++.+. +++++..+.. .....+|. .+|+.+++.+.+.. |++..+...+....+..
T Consensus 316 G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~lg~----~~G~~l~G~l~~~~--g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 316 GLTFALVPVGWST-WITRSLADQAEKAGSIQ----VAVIQLAN----TCGAAIGGYALDNI--GLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHhhhHHHHH-HHHHHCcccHHHHHHHH----HHHHHHHH----HHHHHHHHHHHhcc--ChhhHHHHHHHHHHHHH
Confidence 9999888887777 66644 3333432222 22223444 77788888888876 88888888776655554
Q ss_pred HHH
Q 014905 213 VII 215 (416)
Q Consensus 213 ~~~ 215 (416)
+..
T Consensus 385 ~~~ 387 (394)
T PRK10213 385 LLV 387 (394)
T ss_pred HHH
Confidence 443
No 163
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.11 E-value=1.1e-08 Score=93.98 Aligned_cols=149 Identities=14% Similarity=0.130 Sum_probs=118.5
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhh
Q 014905 68 GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFE 146 (416)
Q Consensus 68 ~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (416)
+.++...|.+.+...+.-.+.-.+..++.+|+|.|+.++++.....+=.. ++++++.+.+.+.+.+.|+-.+....+..
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456679999999999999999999999999999999999998888777 88999999999999999999999999889
Q ss_pred hhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCC
Q 014905 147 SWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYG 224 (416)
Q Consensus 147 ~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 224 (416)
. |+++. ++|-.+ +.+.++..++..++..+.+.++|.+.|+. |.+..|++.+.+.+...++..+..+++++
T Consensus 335 k-YI~~~fd~rlsA-----t~y~v~~~~~~~~~~~i~s~~~G~lyd~~--G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 335 K-YITAHFDKRLSA-----TLYLVGFQFAKQIGIIILSPLAGYLYDRI--GFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp H-HHHHHS-GGGHH-----HHHHHHHTTTHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred H-HHHHhCCHhHHH-----HHHHHHHHHHHHHHHHHHhhhHHhhHhhc--CcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 9 99877 444332 45555555556666688889999999998 99999999888888777777666555443
No 164
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.10 E-value=2.7e-08 Score=93.53 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=57.7
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~ 139 (416)
+++|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.....++.+ ....++.+.....-.+.+.+.+
T Consensus 232 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 232 EQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999998877777666 5554444443443344444433
No 165
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.10 E-value=1.3e-08 Score=95.40 Aligned_cols=156 Identities=16% Similarity=0.060 Sum_probs=98.3
Q ss_pred HHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchH--HHH------HHHHHHHhhhh
Q 014905 48 LMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKR--ACV------TYCITYMLSCV 117 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~--~l~------~~~~~~~~~~l 117 (416)
...........+. |.+ +++|.|+.+.+++.+...++..++.+..|+++||+|||+ ... .+.+...+...
T Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
T TIGR00893 226 LVNIGLGFFLTWF-PTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMF 304 (399)
T ss_pred HHHhHHHHHHHHH-HHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Confidence 3334444555566 555 578999999999999999999999999999999999996 111 11111122222
Q ss_pred -hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 118 -TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 118 -~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
....++.+.......+.+.+.+ ..+...+ ++.|. ++|+...+.. +....+|. .++|.+.+.+.+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~~~~~----~~~~~~g~----~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 305 ATNYVNIPYAALALVALGFFGLG-AGAIGWA-LISDNAPGNIAGLTGGLI----NSLGNLGG----IVGPIVIGAIAATT 374 (399)
T ss_pred HhccchhHHHHHHHHHHHHhchh-hhhHHHH-HHHhhcChhHHHHHHHHH----HHHHHHhh----hhhhHHhhhhccCC
Confidence 2223344444444444444444 5666666 77766 5566664433 22233444 67778888887765
Q ss_pred ccC-chhHHHHHHHHHHHHHHHHH
Q 014905 194 ALG-PVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 194 ~~~-w~~~f~~~~~~~~~~~~~~~ 216 (416)
+ |+..+.+.++..++..+...
T Consensus 375 --g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 375 --GSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred --CchhHHHHHHHHHHHHHHHHHH
Confidence 6 89898888877776665543
No 166
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.09 E-value=3.6e-08 Score=94.43 Aligned_cols=154 Identities=12% Similarity=0.042 Sum_probs=91.6
Q ss_pred HhHHHHHHHHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh--CchHHHH-HHHHHHHhhhh-h--ccchhHH
Q 014905 54 WLQGPYVYYLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ--GRKRACV-TYCITYMLSCV-T--KHSSEYK 125 (416)
Q Consensus 54 ~~~~~~l~~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~--Grr~~l~-~~~~~~~~~~l-~--~~~~~~~ 125 (416)
.....++ |.| + +.|++..+.+.......++..++.++.|+++||+ +||+... ....+..++.+ . ....+.+
T Consensus 270 ~~~~~~~-P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 348 (452)
T PRK11273 270 YGILDWS-PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPT 348 (452)
T ss_pred HHHHHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChH
Confidence 3344566 666 4 5799999999999999999999999999999999 5554322 22222222222 1 1223444
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
...+..+..|.+.......... +..|. ++|+...++.+.... +|. .+.+|.+.+.+.+.. ||+..|.
T Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~~~~~----~g~---~~~g~~v~g~l~~~~--g~~~~f~ 418 (452)
T PRK11273 349 VDMACMIVIGFLIYGPVMLIGL-HALELAPKKAAGTAAGFTGLFGY----LGG---SVAASAIVGYTVDFF--GWDGGFM 418 (452)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-HHHHHcChhhhhhHHHHHHHHHH----HHH---HHhhhhhHHHHHHHh--cchHHHH
Confidence 4444445555433222222222 33344 567776444422221 221 144678888888887 8999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014905 203 AAACFLAFGMVIILAS 218 (416)
Q Consensus 203 ~~~~~~~~~~~~~~~~ 218 (416)
+.+...+++.+.....
T Consensus 419 ~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 419 VMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888777776665533
No 167
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.09 E-value=8.5e-09 Score=99.26 Aligned_cols=142 Identities=11% Similarity=0.011 Sum_probs=85.6
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchH-------HHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKR-------ACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGI 136 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~-------~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~ 136 (416)
+++|++..+.+.+.+...++..++.++.|+++||+|||+ ...+...+.++..+ ....++.+...+..++.++
T Consensus 281 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~ 360 (476)
T PLN00028 281 DRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSI 360 (476)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999998752 22223333333333 4445555555555556666
Q ss_pred hhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q 014905 137 ATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVI 214 (416)
Q Consensus 137 ~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~ 214 (416)
+.+...+...+ +..+. ++++...++. +.+..+|+ .++|.+.+ ..+. .+|+..|.+.+++.+++.++
T Consensus 361 ~~~~~~~~~~~-~~~~~~~~~~g~~~g~~----~~~g~lg~----~i~~~l~~-~~~~--~~y~~~f~~~~~~~~i~~~~ 428 (476)
T PLN00028 361 FVQAACGATFG-IVPFVSRRSLGVISGLT----GAGGNVGA----VLTQLLFF-TGSS--YSTETGISLMGVMIIACTLP 428 (476)
T ss_pred HHHHhhhhhcc-cCcccChhhchhhhhhh----hccccHHH----HHHHHHHH-hcCC--ccHhhHHHHHHHHHHHHHHH
Confidence 55444443344 44443 4455543332 22222223 44444322 1112 26899999988887777666
Q ss_pred HHHh
Q 014905 215 ILAS 218 (416)
Q Consensus 215 ~~~~ 218 (416)
....
T Consensus 429 ~~~~ 432 (476)
T PLN00028 429 VAFI 432 (476)
T ss_pred HHhe
Confidence 6533
No 168
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.09 E-value=2.6e-09 Score=102.17 Aligned_cols=148 Identities=12% Similarity=0.034 Sum_probs=103.9
Q ss_pred hHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh--CchHHHHHH--HHHHHhhhh-hccchhHHHHH
Q 014905 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ--GRKRACVTY--CITYMLSCV-TKHSSEYKILM 128 (416)
Q Consensus 55 ~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~--Grr~~l~~~--~~~~~~~~l-~~~~~~~~~l~ 128 (416)
....++ +.| +++|.++.+.+.+.+...++..+++++.|+++||. ++|+...+. .+..+++.+ ....++++.++
T Consensus 259 ~~~~~l-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~ 337 (455)
T TIGR00892 259 APIIFL-VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLV 337 (455)
T ss_pred chHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 334455 555 78899999999999999999999999999999984 344433333 333344444 45667888888
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
+.+++.|++.+...+...+ ++.|. ++++...+.. +....+|. .++|.+++.+.+.. .+|+..|++.+
T Consensus 338 i~~~~~G~~~g~~~~~~~~-~~~~~~~~~~~g~~~g~~----~~~~~lg~----~igp~i~G~l~~~~-g~~~~~f~~~~ 407 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFE-VLMDLVGAQRFSSAVGLV----TIVECCAV----LIGPPLAGRLVDAT-KNYKYIFYASG 407 (455)
T ss_pred HHHHHHHHHhchHHHHHHH-HHHHHhhHHHHhhHHhHH----HHHHHHHH----Hccccceeeeehhc-CCcchHHHHhh
Confidence 9999999998888777777 76655 5566664333 33334445 77778877777654 15999998887
Q ss_pred HHHHHHHH
Q 014905 206 CFLAFGMV 213 (416)
Q Consensus 206 ~~~~~~~~ 213 (416)
+..++..+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 77666554
No 169
>PRK10054 putative transporter; Provisional
Probab=99.08 E-value=1.6e-08 Score=95.08 Aligned_cols=147 Identities=11% Similarity=0.100 Sum_probs=106.5
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc-chhHHHHHHHHHHHHhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH-SSEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~-~~~~~~l~~~r~l~G~~~~~~~ 142 (416)
++.+.+....+.+.+...+.....+++.|++.||+++|+.+..++....++.. ... .++.+.+.+..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888888888888889999999999999999888877777766 444 3577777788899999988777
Q ss_pred hhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 014905 143 SAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASW 219 (416)
Q Consensus 143 ~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 219 (416)
|...+ ++.+. +.|+.. . +..+. ..+|. .++|.+++.+.++. |....|++.+....+..++..+..
T Consensus 317 p~~~~-~~~~~~p~~~~~~~---~-~~~~~-~~~G~----~~Gp~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 384 (395)
T PRK10054 317 PGEYM-LIDHIAPPGMKASY---F-SAQSL-GWLGA----AINPLVSGVILTTL--PPWSLFVILALAIVAAWLLMLKGM 384 (395)
T ss_pred hhHHH-HHHHhCCcccceeh---H-hHHHH-HHHHH----HHHHHHHHHHHHHc--ChhhHHHHHHHHHHHHHHHHHhcc
Confidence 76665 66544 445544 2 22221 22344 88999999999987 888888887777766666665334
Q ss_pred ccCC
Q 014905 220 TENY 223 (416)
Q Consensus 220 ~~~~ 223 (416)
+|+|
T Consensus 385 ~~~~ 388 (395)
T PRK10054 385 RARP 388 (395)
T ss_pred ccCc
Confidence 4443
No 170
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.07 E-value=8.9e-09 Score=99.96 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=92.2
Q ss_pred HHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc--chhHHHHHHHHH
Q 014905 58 PYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH--SSEYKILMLGRI 132 (416)
Q Consensus 58 ~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~--~~~~~~l~~~r~ 132 (416)
+++ |.| +++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+..+ ... ..+.+......+
T Consensus 296 ~~l-p~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 296 ALL-PTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHH-HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 455 555 48999999999999999999999999999999999999998887665555443 222 234444444444
Q ss_pred HHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFL 208 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~ 208 (416)
+.+.......+...+ ++.|. ++|+...+..+.. ..+|. .++|.+++.+.+.. ||+..+...+...
T Consensus 375 ~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~----~~~g~----~lgp~l~g~l~~~~--g~~~~~~~~~~~~ 442 (496)
T PRK03893 375 FQQMLGQGISGLLPK-LIGGYFDTEQRAAGLGFTYNV----GALGG----ALAPILGALIAQRL--DLGTALASLSFSL 442 (496)
T ss_pred HHHHHhcccchhhHH-HHHhhCCHHHhhcccchhhhh----hhHHH----HHHHHHHHHHhccC--ChHHHHHHHHHHH
Confidence 444333233344445 55544 6677774444222 23344 67778888888876 8887776554433
No 171
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.06 E-value=2.2e-08 Score=92.89 Aligned_cols=122 Identities=13% Similarity=0.023 Sum_probs=92.7
Q ss_pred HHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch-hHHHHHHHHHHHHhh
Q 014905 62 YLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS-EYKILMLGRIFGGIA 137 (416)
Q Consensus 62 ~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~-~~~~l~~~r~l~G~~ 137 (416)
|.+ + .+|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+....+++.. ....+ +.+.+.+..++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVG 314 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 666 4 4899999999999999999999999999999999999999888766666665 55555 488888889999999
Q ss_pred hhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 014905 138 TSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT 192 (416)
Q Consensus 138 ~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~ 192 (416)
.+...+...+ ++.|. ++|+...+..+.. ..+|. .++|.+++.+.+.
T Consensus 315 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~----~~~~~----~~g~~~~g~l~~~ 363 (365)
T TIGR00900 315 YGPINVPQGT-LLQRRVPAELLGRVFGAQFSL----SHAAW----PLGLILAGPLADH 363 (365)
T ss_pred HHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHH----HHHHH----HHHHHHHHHHHHH
Confidence 9988887777 77765 5566664444333 33334 5566676666654
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.06 E-value=6.1e-08 Score=87.64 Aligned_cols=142 Identities=15% Similarity=0.192 Sum_probs=97.6
Q ss_pred HHhHHHHHHHHH-H---HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHH
Q 014905 53 DWLQGPYVYYLY-S---TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKIL 127 (416)
Q Consensus 53 ~~~~~~~l~~l~-~---~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l 127 (416)
+.....+. +.| + ++|.++++.+...+.+..+..++....+++.||+|+||.+.++.....++.+ ....++...
T Consensus 156 e~~~~~w~-~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~- 233 (310)
T TIGR01272 156 EVSAGSFL-VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA- 233 (310)
T ss_pred HHHHHHHH-HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-
Confidence 33444455 555 3 2689999999999999999999999999999999999988887666666555 333333322
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 128 MLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
...-.+.|++.+..+|...+ ...+. ++.+...+ .... ..+|. .+.|.+.+.+.|.. |.+.+|++..
T Consensus 234 ~~~~~l~g~~~s~i~P~~~s-~a~~~~~~~~~~asa----i~~~-~~~Gg----~i~P~l~G~lad~~--g~~~a~~v~~ 301 (310)
T TIGR01272 234 MWFVLALGLFNSIMFPTIFS-LALNALGRHTSQGSG----ILCL-AIVGG----AIVPLLQGSLADCL--GIQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhhhhhhhhhHH----HHHH-HHhcc----hHHHHHHHHHHHhc--cchHHHHHHH
Confidence 23455788999999998777 55543 33333321 2222 22444 88888888888876 8888887554
Q ss_pred HHH
Q 014905 206 CFL 208 (416)
Q Consensus 206 ~~~ 208 (416)
+..
T Consensus 302 ~~~ 304 (310)
T TIGR01272 302 PCY 304 (310)
T ss_pred HHH
Confidence 443
No 173
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.04 E-value=4.1e-08 Score=90.94 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=86.5
Q ss_pred HHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh-CchHHHHHHHHHHHhhhh-hccchhHHHHH
Q 014905 52 GDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ-GRKRACVTYCITYMLSCV-TKHSSEYKILM 128 (416)
Q Consensus 52 ~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~ 128 (416)
.......++ |.+ ++.|.|+.+.+.+.+...++..++++..|+++||+ +||+.+..+.....++.+ ..+.++.....
T Consensus 212 ~~~~~~~~l-p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T TIGR00896 212 LYYSLIGWL-PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA 290 (355)
T ss_pred HHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 334444566 556 78899999999999999999999999999999999 566677777666666655 44443322222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh----cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH----NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~----~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
..++.|++.+...+...+ .+.+. ++++.. . +.......+|. .++|.+.+.+.++.
T Consensus 291 -~~~l~g~~~g~~~~~~~~-~~~~~~~~~~~~g~~---~-~~~~~~~~~~~----~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 291 -WALVLGLGQGGAFPLALT-LIGLRSRQAAQAAAL---S-AMAQSIGYLLA----ALGPLFVGVLHDIS 349 (355)
T ss_pred -HHHHHHHhhhhHhHHHHH-HHHHhccCHHHHHHH---H-HHHHHHHHHHH----HHHHHHHHHHHHHh
Confidence 346778988888876666 54432 223333 2 22222222333 67888888888765
No 174
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.04 E-value=1.3e-08 Score=97.98 Aligned_cols=151 Identities=13% Similarity=0.051 Sum_probs=98.3
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc---c--ch------hHHHHH
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK---H--SS------EYKILM 128 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~---~--~~------~~~~l~ 128 (416)
|.+ +++|.+..+.++......++..++.++.|+++||+|||+.+.++.....++.+ .. . .+ +...+.
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 555 78999998889999999999999999999999999999999888766666554 32 1 11 222222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
...+..+.......+.... ++.|. ++|+...+.. .....+|. .++|.+.+.+.+.. +|+..|++.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~----~~~~~lg~----~i~~~~~~~~~~~~--~~~~~f~~~~ 456 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWV-IVSEIFPLSLRPKGISIA----VAANWLAN----FIVGFLFPTMLESI--GVGGVFIFFG 456 (481)
T ss_pred HHHHHHHHHHccccCeehh-hhhccCChHHHHHHHHHH----HHHHHHHH----HHHHHHHHHHHHhc--CccceehhHH
Confidence 2222222222222233333 44555 5566664333 33333444 66777777777765 8999999888
Q ss_pred HHHHHHHHHHHHhcccCC
Q 014905 206 CFLAFGMVIILASWTENY 223 (416)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~ 223 (416)
++.++..+......||.+
T Consensus 457 ~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 457 GLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHheecccCC
Confidence 888887777765566544
No 175
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.04 E-value=5.9e-08 Score=85.71 Aligned_cols=165 Identities=12% Similarity=0.054 Sum_probs=119.9
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh-CchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ-GRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+.....+...-.+++++.|.|+|+.+.|++.+...+.++..++..-.+++|. ++|+..+....+..++.. +.+.+...
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 5566666777788666699999999999999999999999999999999965 467777777777777766 44544322
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAA 204 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~ 204 (416)
.+.- -++.|++.|..++.... ++.++ ++...+.+......+.|+.+ . ..||.+.+++.|.. .+|+.+....
T Consensus 299 ~~lw-~~llG~G~G~~F~laL~-li~~rs~~a~~Aa~LSgmaQg~GYll-A----a~GP~l~G~lhDa~-gsw~~~~~~l 370 (395)
T COG2807 299 PILW-ALLLGLGQGGAFPLALT-LILLRSSDAAIAAALSGMAQGVGYLL-A----AFGPWLFGFLHDAT-GSWSAPLVLL 370 (395)
T ss_pred HHHH-HHHHhCccchHHHHHHH-HHHhhcCChHHHHHHHHHhhhhhHHH-H----hhhhhhHhHHHHhc-CChHHHHHHH
Confidence 2222 38899999999998888 88766 33333433444445555555 4 68899999998876 4899988887
Q ss_pred HHHHHHHHHHHHHhcc
Q 014905 205 ACFLAFGMVIILASWT 220 (416)
Q Consensus 205 ~~~~~~~~~~~~~~~~ 220 (416)
....+...+.-+..-|
T Consensus 371 ~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 371 ALATLLMLIFGLRAGR 386 (395)
T ss_pred HHHHHHHHHHHhhcch
Confidence 7777776666654433
No 176
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.02 E-value=2.5e-08 Score=94.04 Aligned_cols=128 Identities=17% Similarity=0.252 Sum_probs=91.2
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh--hccchhHHHHHHHHHHHHhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV--TKHSSEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l--~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (416)
+++|.++.+.+.+.+...++..++.+..|+++||+|||+.+..+.....+... ....++.+.+.+..++.|...+...
T Consensus 267 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
T TIGR00891 267 ADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIW 346 (405)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccch
Confidence 67899999999999999999999999999999999999998888665433222 3344566666666677776666666
Q ss_pred hhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC-chhHHHH
Q 014905 143 SAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG-PVAPFDA 203 (416)
Q Consensus 143 ~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~-w~~~f~~ 203 (416)
+.... ++.|. ++|++..+.. .....+|. .++|.+.+.+.+.. | |+..+..
T Consensus 347 ~~~~~-~~~~~~~~~~~~~~~g~~----~~~~~~g~----~~g~~~~g~l~~~~--g~~~~~~~~ 400 (405)
T TIGR00891 347 GILPK-HLGEYFPTDQRAAGLGFT----YQLGNLGG----ALAPIIGALLAQRL--DEYGTALAS 400 (405)
T ss_pred hhHHH-HHhhhCCcchhHHHhhHH----HHHHHHHH----HHHHHHHHHHHHhc--cccchhHHh
Confidence 65666 66655 5566663333 22223334 77788888888876 6 7766554
No 177
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.00 E-value=1.6e-08 Score=97.65 Aligned_cols=156 Identities=15% Similarity=0.030 Sum_probs=101.3
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc---hhH-HHHHHHHHHHH
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS---SEY-KILMLGRIFGG 135 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~---~~~-~~l~~~r~l~G 135 (416)
|.+ ++.|.+..+.++......+...++.++.|+++||+|||+.++.+....+++.+ .... +.. .....+.++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 444 78898887777777777888899999999999999999999998877777655 3221 111 12223334444
Q ss_pred hhhhhh-hhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHH--HHHHhhhccCchhHHHHHHHHHH
Q 014905 136 IATSLL-FSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFG--NLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 136 ~~~~~~-~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~--~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
.+.+.. .+.... +++|. ++|+...++.+.....+..+|. .+.|.+. ++..+.. +|+..|++.++..+
T Consensus 375 ~~~~~~~~~~~~~-~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~----~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 447 (479)
T PRK10077 375 AAFAMSWGPVCWV-LLSEIFPNAIRGKALAIAVAAQWIANYFVS----WTFPMMDKNSWLVAHF--HNGFSYWIYGCMGV 447 (479)
T ss_pred HHHhccccchhHH-HhHhhCChhHHHHHHHHHHHHHHHHHHHHH----HHhHHHHhccchhhhc--cCccHHHHHHHHHH
Confidence 444332 233445 66666 6678876655555555544444 4555554 4444554 88889988888777
Q ss_pred HHHHHHHHhcccCCC
Q 014905 210 FGMVIILASWTENYG 224 (416)
Q Consensus 210 ~~~~~~~~~~~~~~~ 224 (416)
+..++.+...||+++
T Consensus 448 ~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 448 LAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHhccccCCC
Confidence 777776656676654
No 178
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.98 E-value=1.3e-07 Score=90.17 Aligned_cols=119 Identities=14% Similarity=0.137 Sum_probs=81.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-hhHHHHHHHHHHHHhhhhhhhhhhhh
Q 014905 70 GKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-SEYKILMLGRIFGGIATSLLFSAFES 147 (416)
Q Consensus 70 s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (416)
++.+.+.+.+...++..++.+++|+++||+|||+++..+....+++.+ ..+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566778888888999999999999999999999999998777777665 4333 46677777788888988888777777
Q ss_pred hhhhhh---c---ccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 148 WLVAEH---N---KRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 148 ~~i~e~---~---~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
+++|. + ...+..+...+..+....+|. .+++.+.+.+.+..
T Consensus 335 -~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~----~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 335 -LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ----ALAGFLVGLILGII 381 (437)
T ss_pred -HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHc
Confidence 76643 1 011111222244444445555 55556666665544
No 179
>PRK10133 L-fucose transporter; Provisional
Probab=98.97 E-value=2e-07 Score=88.74 Aligned_cols=138 Identities=11% Similarity=0.099 Sum_probs=96.4
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFS 143 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (416)
+.+|.|+.+.++....+.++..++.+..|++.||+|||+++..+..+.....+ ..+.++.+ .+..-.+.|++.+..+|
T Consensus 288 ~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 288 EIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYP 366 (438)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999998888666655555 33344432 24456778999999999
Q ss_pred hhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC-chhHHHHHHHHHHHHHHHH
Q 014905 144 AFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG-PVAPFDAAACFLAFGMVII 215 (416)
Q Consensus 144 ~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~ 215 (416)
...+ ...|. ++.+.+.+.. . . ...|. .++|.+.+.+.+.. | -+..|++..+..+......
T Consensus 367 ~~~s-~a~~~~~~~~~~as~l~-~---~-~~~g~----~~~~~i~G~l~~~~--g~~~~~~~v~~~~~~~~~~~~ 429 (438)
T PRK10133 367 TIFS-LGIKNLGQDTKYGSSFI-V---M-TIIGG----GIVTPVMGFVSDAA--GNIPTAELIPALCFAVIFIFA 429 (438)
T ss_pred HHHH-HHHcccchhhccchhHH-h---H-Hhccc----hHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHH
Confidence 8887 66654 3334443333 1 1 22334 55666667777665 6 6788876665555544443
No 180
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.97 E-value=2.4e-07 Score=86.50 Aligned_cols=166 Identities=19% Similarity=0.272 Sum_probs=112.5
Q ss_pred HHHHHHHhHHHHHHHHH-HHcC-CChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-hh
Q 014905 48 LMMAGDWLQGPYVYYLY-STYG-FGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-SE 123 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~-~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-~~ 123 (416)
+...+......+. +.| ++.| .+...+|.+.+...+.-+..-...+++..|+|.|+++.++.+..++=.. .+.. ++
T Consensus 218 l~~~~~~~~~~f~-~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 218 LIGISHAAYYTFF-SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHH-HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4455555666666 666 8888 7888889888888888889999999999999999999999999888655 4444 44
Q ss_pred HHHHH----HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc--
Q 014905 124 YKILM----LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA-- 194 (416)
Q Consensus 124 ~~~l~----~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~-- 194 (416)
.+... ....+.|+..+..+.+... ++.+. +.|+...++++ .+..+++..+|..++|++.+.++
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~-yi~~~~p~~~~at~Q~l~~-------~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVR-YIDRIAPPELRATAQGLYS-------ALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHH-HHHHhCCccchHHHHHHHH-------HHHhhHHHHHHHHHHHHHHHHhcch
Confidence 44333 3356799999999998888 88866 44445433331 12233334777788888887761
Q ss_pred --cCchhHHHHHHHHHHHHHHHHHHhcccC
Q 014905 195 --LGPVAPFDAAACFLAFGMVIILASWTEN 222 (416)
Q Consensus 195 --~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 222 (416)
..|...+.+.+++.++..++...+.||+
T Consensus 369 ~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 369 GMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 1234455555555555555554444443
No 181
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.97 E-value=2.3e-07 Score=89.86 Aligned_cols=121 Identities=14% Similarity=0.051 Sum_probs=91.4
Q ss_pred HHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc---cchhHHHHHHHH
Q 014905 58 PYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK---HSSEYKILMLGR 131 (416)
Q Consensus 58 ~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~---~~~~~~~l~~~r 131 (416)
.+. |.| +.+|.|+.+.|.......++..++.++.|++.||+|||+.+..+.....++.. .. ..++.+......
T Consensus 280 ~~~-~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 280 LLM-AQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 344 666 46899999999999999999999999999999999999998888776666554 22 234566667778
Q ss_pred HHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHH
Q 014905 132 IFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAI 180 (416)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~ 180 (416)
++.|++.+...++... ...+. ++++...+..+.....|..+|..+.+.
T Consensus 359 ~l~G~g~g~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 359 ALLGFSAASALLASTS-AIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHHhHHHHHHHHHH-HHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999988776666 44433 778888777766777777776644443
No 182
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.96 E-value=2.2e-07 Score=88.57 Aligned_cols=154 Identities=13% Similarity=0.036 Sum_probs=90.8
Q ss_pred HHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh--Cch-HHHHHH---HHHHHhhhhhccchhHHHH
Q 014905 56 QGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ--GRK-RACVTY---CITYMLSCVTKHSSEYKIL 127 (416)
Q Consensus 56 ~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~--Grr-~~l~~~---~~~~~~~~l~~~~~~~~~l 127 (416)
...++ |.| +++|+|..+.+...+...++..++.+..|+++||+ ++| +..... ..............+....
T Consensus 262 ~~~~~-p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK11663 262 INDWG-NLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQ 340 (434)
T ss_pred HHHHH-HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHH
Confidence 34455 445 57899999999999999999999999999999999 333 322221 1112222221122233333
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHH
Q 014905 128 MLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAA 204 (416)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~ 204 (416)
....+..|++.......... ...|. ++|+...+.. +....+|. .++|.+.+.+.+.. ||+..|...
T Consensus 341 ~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~----~~~~~~g~----~~~p~~~g~l~~~~--g~~~~f~~~ 409 (434)
T PRK11663 341 AACFFTIGFFVFGPQMLIGM-AAAECSHKEAAGAATGFV----GLFAYLGA----ALSGYPLAKVLEIW--HWTGFFVVI 409 (434)
T ss_pred HHHHHHHHHHHhhHHHHHHH-HHHhcccHhhHHhHHHHH----HHHHHHHH----HHhcccHHHHHHhc--ccHHHHHHH
Confidence 33334444432211111122 44453 5566664433 23333444 77778888888876 899999998
Q ss_pred HHHHHHHHHHHHHhccc
Q 014905 205 ACFLAFGMVIILASWTE 221 (416)
Q Consensus 205 ~~~~~~~~~~~~~~~~~ 221 (416)
+++.++..+......++
T Consensus 410 ~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 410 SIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88887776655544433
No 183
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.96 E-value=1.1e-07 Score=90.30 Aligned_cols=129 Identities=18% Similarity=0.181 Sum_probs=80.0
Q ss_pred HHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc-c-hhHHHHHHHHHH
Q 014905 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH-S-SEYKILMLGRIF 133 (416)
Q Consensus 58 ~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~-~-~~~~~l~~~r~l 133 (416)
.++ |.| ++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.+...+..+ ... . ++...+ .-.+
T Consensus 252 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 328 (426)
T PRK12307 252 GLL-PTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLL--GACL 328 (426)
T ss_pred HHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHH--HHHH
Confidence 345 555 77899999999999999999999999999999999999998888766555444 222 2 222222 2223
Q ss_pred HHhh--hhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhH
Q 014905 134 GGIA--TSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAP 200 (416)
Q Consensus 134 ~G~~--~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~ 200 (416)
.|.+ .....+.... ++.|. ++|++..+...... .+|. .++|.+.+.+.+.. ++...
T Consensus 329 ~~~~~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~~~~----~~~~----~~gp~~~g~l~~~~--g~~~~ 389 (426)
T PRK12307 329 FGLMATNVGVGGLVPK-FLYDYFPLEVRGLGTGLIYNLA----ATSG----TFNSMAATWLGITM--GLGAA 389 (426)
T ss_pred HHHHHhcccHhHHHHH-HHHHhCcHHHHhhhhhHHHHHH----hHHH----HHHHHHHHHHHHcc--cHHHH
Confidence 3322 2222233334 55544 56777744332222 2234 67778888887765 65443
No 184
>PRK09848 glucuronide transporter; Provisional
Probab=98.94 E-value=1.2e-07 Score=90.81 Aligned_cols=91 Identities=9% Similarity=0.074 Sum_probs=67.7
Q ss_pred HHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc--hhHHHHHHHHHHHHh
Q 014905 62 YLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS--SEYKILMLGRIFGGI 136 (416)
Q Consensus 62 ~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~--~~~~~l~~~r~l~G~ 136 (416)
+.| +.+|.++...++......++..++.++.++++||+|+|+.+.++..+..++.+ ..+. ++++.+.+..++.|+
T Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~ 331 (448)
T PRK09848 252 LFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASI 331 (448)
T ss_pred eeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 445 35676665555555555677888999999999999999999999877777666 4343 366777777888999
Q ss_pred hhhhhhhhhhhhhhhhh
Q 014905 137 ATSLLFSAFESWLVAEH 153 (416)
Q Consensus 137 ~~~~~~~~~~~~~i~e~ 153 (416)
|.+...+...+ +.+|.
T Consensus 332 G~~~~~~~~~a-l~~~~ 347 (448)
T PRK09848 332 GQGVTMTVMWA-LEADT 347 (448)
T ss_pred HHHHHHHHHHH-HHHHh
Confidence 99888887777 76644
No 185
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.94 E-value=2.5e-07 Score=86.47 Aligned_cols=94 Identities=10% Similarity=0.056 Sum_probs=63.4
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----hc-cchhHHHHHHHHHHHHhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----TK-HSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~~-~~~~~~~l~~~r~l~G~~~~ 139 (416)
+++|.++.+.|.+.+...+...++.++.|++.||+|||+.+..+.....+..+ .. ...+.+...++..+.+.+.+
T Consensus 223 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (377)
T PRK11102 223 ELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVS 302 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999998887654433222 11 12244555545444444444
Q ss_pred hhhhhhhhhhhhhh--cccCcc
Q 014905 140 LLFSAFESWLVAEH--NKRGFD 159 (416)
Q Consensus 140 ~~~~~~~~~~i~e~--~~r~~~ 159 (416)
........ .+.|. ++++..
T Consensus 303 ~~~~~~~~-~~~~~~~~~~g~~ 323 (377)
T PRK11102 303 MISSNAMA-VILDEFPHMAGTA 323 (377)
T ss_pred HhhHHHHH-HHhccccccchHH
Confidence 44444444 44444 445554
No 186
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.94 E-value=4.8e-08 Score=90.50 Aligned_cols=112 Identities=18% Similarity=0.136 Sum_probs=83.0
Q ss_pred HHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHH-HHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-----
Q 014905 50 MAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGF-GSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS----- 121 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~-~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~----- 121 (416)
..+........ |.| +++|+++++.|.+.+... +...++.+++|++.||+|||+.+..+.+...++.. ..+.
T Consensus 222 ~~~~~~~~~~~-~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
T TIGR00901 222 KLGDSAATVLT-TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGH 300 (356)
T ss_pred HHHHHHHHHHH-HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34444444555 555 679999999998887655 67789999999999999999998888776666544 2221
Q ss_pred ------hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhH
Q 014905 122 ------SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWL 163 (416)
Q Consensus 122 ------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~ 163 (416)
++.+.+....++.+++.+...+...+ ++.|. ++|++..+..
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~p~~~~g~~~g~~ 350 (356)
T TIGR00901 301 HDGITFPHLLMLFLTITLEAVTGGLGTVAFVA-FLSKLSNPKFGATQMALL 350 (356)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHH-HHHHhcCCCccHHHHHHH
Confidence 35677888888999999999988888 88866 5666654333
No 187
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.93 E-value=1.9e-07 Score=89.08 Aligned_cols=158 Identities=11% Similarity=-0.023 Sum_probs=92.8
Q ss_pred hHHHHHHHHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHH---Hhhhh-hcc--chhHHH
Q 014905 55 LQGPYVYYLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITY---MLSCV-TKH--SSEYKI 126 (416)
Q Consensus 55 ~~~~~l~~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~---~~~~l-~~~--~~~~~~ 126 (416)
....++ |.| + +.|.|+.+.++..+...+...++.+..|+++||+++|+....+.... .++.+ ... ..+.+.
T Consensus 269 ~~~~~~-p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 269 GVLDWS-PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHHhH-HHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 334466 556 4 57999999999999999999999999999999996543222222111 11222 111 223343
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA 203 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~ 203 (416)
.....+..|.+.......... ...|. ++|+...++.+... ...|. .++|.+.+.+.+.. ||...+.+
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~---~~gg~----~~gp~l~G~l~~~~--g~~~~~~~ 417 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGL-HALELAPKKAAGTAAGFTGLFG---YLGGS----VAASAIVGYTVDFF--GWDGGFMV 417 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHH-HHHHhcChhheeeehhhhchHH---Hhhhh----hhcchhHHHHHHhc--cchHHHHH
Confidence 333344444432221111112 33333 56777754442221 11223 56778888888876 89999988
Q ss_pred HHHHHHHHHHHHHHhcccCC
Q 014905 204 AACFLAFGMVIILASWTENY 223 (416)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~ 223 (416)
.....+++.+......+|++
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 418 MIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 88777777776665666654
No 188
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.91 E-value=4.8e-07 Score=84.98 Aligned_cols=141 Identities=11% Similarity=-0.044 Sum_probs=93.2
Q ss_pred HHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhh
Q 014905 62 YLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIAT 138 (416)
Q Consensus 62 ~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~ 138 (416)
+.+ +.+|.|+.+.|++.+...++..++++..+++.||.++|+.+..+... ++..+ ....++++...+..++.|++.
T Consensus 229 ~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 229 LAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 444 57899999999999999999999999999999999999888777533 33333 445667777777788899998
Q ss_pred hhhhhhhhhhhhhhh--cc--cCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHH
Q 014905 139 SLLFSAFESWLVAEH--NK--RGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVI 214 (416)
Q Consensus 139 ~~~~~~~~~~~i~e~--~~--r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~ 214 (416)
+...++..+ .+.+. ++ +|+..+.. +....+|. .++..+.+.. +.. |-+..+.+.+...++...+
T Consensus 308 g~~~~~~~~-~~q~~~~~~~~~g~~~a~~----~~~~~~~~----~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 308 GFFVVPMNA-LLQHRGHVLVGAGHSIAVQ----NFNENLAM----LLMLGLYSLL-VKL--GVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred hhhhhhHHH-HHHhhCcccccchhHHHHH----hHHHHHHH----HHHHHHHHHH-HHc--CCCHHHHHHHHHHHHHHHH
Confidence 887777777 66544 21 35453333 33334444 3444444433 333 6666666554444444433
Q ss_pred H
Q 014905 215 I 215 (416)
Q Consensus 215 ~ 215 (416)
.
T Consensus 376 ~ 376 (393)
T PRK11195 376 A 376 (393)
T ss_pred H
Confidence 3
No 189
>PRK11043 putative transporter; Provisional
Probab=98.91 E-value=3.5e-07 Score=86.25 Aligned_cols=101 Identities=10% Similarity=0.102 Sum_probs=71.0
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh----h--ccchhHHHHHHHHHHH
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV----T--KHSSEYKILMLGRIFG 134 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l----~--~~~~~~~~l~~~r~l~ 134 (416)
|.+ +++|.++.+.|+......++..++....+++.||+|+|+..........++.+ . ...++.+..++...+.
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVM 306 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 555 78899999999988888888999999999999999999876554333333221 1 1234555566666778
Q ss_pred Hhhhhhhhhhhhhhhhhhh--cccCcchhhH
Q 014905 135 GIATSLLFSAFESWLVAEH--NKRGFDQQWL 163 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~ 163 (416)
|++.+...+...+ ...|. +++++..++.
T Consensus 307 ~~~~~~~~~~~~~-~~~~~~~~~~g~~~g~~ 336 (401)
T PRK11043 307 AAANGAIYPIVVA-QALRPFPQATGKAAALQ 336 (401)
T ss_pred HHHHHHHHHHHHH-HHhhhCcccChHHHHHH
Confidence 8888888877666 55443 5677765555
No 190
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.91 E-value=2.1e-07 Score=87.67 Aligned_cols=145 Identities=15% Similarity=0.077 Sum_probs=96.0
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhh
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIAT 138 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~ 138 (416)
|.| ++.+.++.+.+++.+...+.......+.+++.|| ++.|+.+..+....+++.+ ....++++.+.+...+.+.+.
T Consensus 232 p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~ 311 (400)
T PRK11646 232 PIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGS 311 (400)
T ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 666 6666678889999888887777666666777764 6666667777777777766 666777877777778888888
Q ss_pred hhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-cC-chhHHHHHHHHHHHHHH
Q 014905 139 SLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLA-LG-PVAPFDAAACFLAFGMV 213 (416)
Q Consensus 139 ~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~-~~-w~~~f~~~~~~~~~~~~ 213 (416)
+...+...+ ++.|. ++|++..+.. +....+|. .++|.+++.+.+..+ .+ ...++...+...++...
T Consensus 312 ~~~~p~~~~-~~~~~~p~~~~g~~~g~~----~~~~~~g~----~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 312 IIAEPARET-LSASLADARARGSYMGFS----RLGLALGG----AIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHccHHH-HHHhcCCcccchhhhhHH----HHHHHHHH----HhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 877777777 66654 6677764444 33334444 666677777766531 12 34555555555555544
Q ss_pred HH
Q 014905 214 II 215 (416)
Q Consensus 214 ~~ 215 (416)
..
T Consensus 383 ~~ 384 (400)
T PRK11646 383 AL 384 (400)
T ss_pred HH
Confidence 43
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.91 E-value=2.9e-07 Score=86.13 Aligned_cols=96 Identities=21% Similarity=0.259 Sum_probs=71.8
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-----hhHHHHHHHHHHHHhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-----SEYKILMLGRIFGGIAT 138 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-----~~~~~l~~~r~l~G~~~ 138 (416)
+++|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.....++.+ .... ++.+.+.....+.|++.
T Consensus 235 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (385)
T TIGR00710 235 DIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGN 314 (385)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999998887666655544 2221 23445556677788888
Q ss_pred hhhhhhhhhhhhhhh--cccCcchh
Q 014905 139 SLLFSAFESWLVAEH--NKRGFDQQ 161 (416)
Q Consensus 139 ~~~~~~~~~~~i~e~--~~r~~~~~ 161 (416)
+...+.... ...|. ++|+...+
T Consensus 315 ~~~~~~~~~-~~~~~~~~~~g~~~~ 338 (385)
T TIGR00710 315 SMISSIAMA-YALEDFPHVAGTASA 338 (385)
T ss_pred HHHHHHHHH-HHhccCcccchHHHH
Confidence 887776666 65554 44555533
No 192
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.89 E-value=5.6e-07 Score=83.74 Aligned_cols=316 Identities=14% Similarity=0.065 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcc--
Q 014905 78 FIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCVTKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEHNK-- 155 (416)
Q Consensus 78 ~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~-- 155 (416)
.++-+....+..++.+.+.|+.|.|+.+.++......-.+..+-.|-+.++.+..+.|+|.+..+..-.. +++|+..
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~-ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGG-YLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccce-ehhhcCChh
Confidence 6667777888999999999999999999999988888776445667888999999999999998888777 9998833
Q ss_pred -cCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh--hccCch--------hHH---HHHHHHHHHHHHHHHHh--c
Q 014905 156 -RGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDT--LALGPV--------APF---DAAACFLAFGMVIILAS--W 219 (416)
Q Consensus 156 -r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~--~~~~w~--------~~f---~~~~~~~~~~~~~~~~~--~ 219 (416)
+++..++.-+....+..+|+ ++--.+...-... ...+.+ ..+ .+.+++..+..+...-. .
T Consensus 135 tie~Nisi~Wai~~~~li~Gg----i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGG----IILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhh----HhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 33332233223333333322 1111110000000 000110 011 11111111111111111 1
Q ss_pred ccCCCCccchhhHHHhhh---HHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCC--CCCc----hHHHHHHHH
Q 014905 220 TENYGDPEKKNLLAQFKG---AALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPND--EEIP----HGFIFATFM 290 (416)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~g~~~~~~~ 290 (416)
|.+....+.++.++...+ ..-+..++++.+.+. ..++.......+.....|...... .+.+ .+......+
T Consensus 211 p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~-~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g 289 (461)
T KOG3098|consen 211 PSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLF-PFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIG 289 (461)
T ss_pred CccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHH-HHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHh
Confidence 111111111110011122 223345566666553 233333333333332334433322 1122 344444557
Q ss_pred HHHHHhhHHHHHHhhccc-ccchhHHHHHHHHHHHHHHHHHHhhccCC---CCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014905 291 LASMLGSSFASRLLAHSS-LRVESYMQIVFIISSASLLIPILTNFLET---PPDVRGGGISLSGSLQLIGFSTFEACVGI 366 (416)
Q Consensus 291 ~~~~~~~~~~~~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 366 (416)
++.++++...+.+.||.+ .+.++.+.++..+....+.+.......+. +.+.....+..+.....+...+.|+.-..
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 888888888888888862 33334444444444333332222111111 11111111111344566666777788888
Q ss_pred chhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 367 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 367 ~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
.....+.+++... +++|.++.++++.-..+...
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHH
Confidence 8888899999888 55677777776654444433
No 193
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.89 E-value=2e-07 Score=84.21 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=96.6
Q ss_pred HHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-------hhH-
Q 014905 56 QGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-------SEY- 124 (416)
Q Consensus 56 ~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-------~~~- 124 (416)
...++ |.| ++++.++.+.|.+...+.+...+..+.+|+++||+|.+|++.......+++.. .... .+.
T Consensus 237 fs~~l-~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~ 315 (417)
T COG2223 237 FSAYL-PMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFV 315 (417)
T ss_pred HHHHH-HHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchH
Confidence 33455 656 69999999999999999999999999999999999999988877665555444 2222 233
Q ss_pred ---HHHHHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchh
Q 014905 125 ---KILMLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVA 199 (416)
Q Consensus 125 ---~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~ 199 (416)
..++...+..|+|.+..+- +++.. ++-|...++. +....+|. ..-|..-+...+.. .+++.
T Consensus 316 ~~~~~~l~l~~~~G~GnGsvfk-----~Ip~if~~~~G~v~G~v----ga~G~lGG----f~lp~~~g~~~~~t-g~~~~ 381 (417)
T COG2223 316 VFVAVFLALFVFAGLGNGSVFK-----MIPVIFPKETGAVTGIV----GAIGGLGG----FFLPLAFGVSLDLT-GSYTG 381 (417)
T ss_pred HHHHHHHHHHHHhccCcchhee-----echHHHHhhhhHHHHHH----HHhccccc----cchhHHHHHHHHhc-ccHHH
Confidence 3345556666777766554 44434 2233332222 22222222 44444555555554 14899
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 014905 200 PFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~ 218 (416)
.|++.....+++.++.+..
T Consensus 382 ~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 382 AFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988888888776644
No 194
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.86 E-value=3.2e-07 Score=98.45 Aligned_cols=115 Identities=12% Similarity=0.072 Sum_probs=89.4
Q ss_pred hHHHHHHHHH--HHcCCChh-hHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH
Q 014905 55 LQGPYVYYLY--STYGFGKG-EIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG 130 (416)
Q Consensus 55 ~~~~~l~~l~--~~~~~s~~-~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~ 130 (416)
....++ |.| +++|.+.. +.|++.+...++.++++++.|+++||+++|+.+.++.+..+++.+ .....+.+.+++.
T Consensus 250 ~~~~~~-~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (1146)
T PRK08633 250 LAQANF-PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVL 328 (1146)
T ss_pred HHHHhh-HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 334445 444 67899998 999999999999999999999999999999988888777777766 6666788888888
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAI 171 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~ 171 (416)
.++.|++.+...+...+ ++.+. +.|+...+..+....++.
T Consensus 329 ~~~~g~~~~~~~~~~~~-~~~~~~p~~~rg~~~~~~~~~~~lg~ 371 (1146)
T PRK08633 329 FFLFGFSAGLFIVPLNA-LIQFRAPEKELGKVLAANNFLQNVGM 371 (1146)
T ss_pred HHHHHHHHHHhhHHHHH-HHhhcCCccchhhhhHHHHHHHHHHH
Confidence 89999999888777777 76654 667777555544444333
No 195
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.84 E-value=3.1e-07 Score=88.45 Aligned_cols=156 Identities=12% Similarity=0.039 Sum_probs=87.8
Q ss_pred HHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHH--------HHHH--HHHHhhhh--h
Q 014905 53 DWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRAC--------VTYC--ITYMLSCV--T 118 (416)
Q Consensus 53 ~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l--------~~~~--~~~~~~~l--~ 118 (416)
......++ |.| +++|.+..+.|+..+...++..++.++.|+++||+++|+.. ..+. ....+..+ .
T Consensus 277 ~~~~~~~l-p~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (465)
T TIGR00894 277 YTILPTYL-PTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP 355 (465)
T ss_pred HHHHHHHH-HHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344466 555 67899999999999999999999999999999998754321 1111 11111111 1
Q ss_pred ccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcc-Cc
Q 014905 119 KHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLAL-GP 197 (416)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~-~w 197 (416)
....+.+..++.-.+.+.+.+...+.... ...|...+ ..+...+..+....+|. .++|.+.+.+.+..++ +|
T Consensus 356 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~--~~g~~~g~~~~~~~l~~----~i~p~l~g~~~~~~~~~~~ 428 (465)
T TIGR00894 356 YLSAAFYLTIIILTLANAVSSGPLAGVLI-NSLDLAPR--FLGFIKGITGLPGFIGG----LIASTLAGNILSQDSKNVW 428 (465)
T ss_pred HcCCchHHHHHHHHHHHHHhhhhhhhhhh-chhhcChh--HHHHHHHHHHHHHHHHH----HHHHHhhheeeCCCCchHH
Confidence 12334444444444445444433332222 22233222 22223244444333444 7777777766543211 48
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 014905 198 VAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~ 216 (416)
+..|.+.++..++..++..
T Consensus 429 ~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 429 LIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHee
Confidence 8888888877777766554
No 196
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=4.4e-07 Score=82.00 Aligned_cols=149 Identities=18% Similarity=0.138 Sum_probs=94.7
Q ss_pred HHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhh--CchHHHHHH-HHHHHhhhh-hccch--hHHHHHHHHHH
Q 014905 62 YLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQ--GRKRACVTY-CITYMLSCV-TKHSS--EYKILMLGRIF 133 (416)
Q Consensus 62 ~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~--Grr~~l~~~-~~~~~~~~l-~~~~~--~~~~l~~~r~l 133 (416)
|+| |+.|+|..+.++..+.+-.+.+.+.+++|+++||+ |||..+-+. ++...++.+ ...++ |+++..++-++
T Consensus 276 p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~ 355 (448)
T COG2271 276 PLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFI 355 (448)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Confidence 666 88999999999999999999999999999999996 566655443 444444444 33443 56777788888
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAF 210 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~ 210 (416)
.|+..-+..-.... ...|. +--|.+.+.. + ..+..++...+...-+++.|.+ ||...|.+..+.+++
T Consensus 356 iGf~IyGPqmLiGl-~a~e~~pK~AaGtA~Gf~----G---lf~Yl~Ga~~a~~~~g~i~d~~--gW~g~Fi~~~~~a~l 425 (448)
T COG2271 356 IGFLIYGPQMLIGL-AAAEFVPKKAAGTATGFV----G---LFAYLIGAALAGLPLGYIADTW--GWDGGFIVLSIAALL 425 (448)
T ss_pred HHHHHhhHHHHHHH-HHhccccHhhccchhchh----h---hHHHHhhHHhcCCcceeeEecC--CCcchHHHHHHHHHH
Confidence 88755332211111 12244 2334443333 2 1222222255556666666665 999999888877777
Q ss_pred HHHHHHHhcc
Q 014905 211 GMVIILASWT 220 (416)
Q Consensus 211 ~~~~~~~~~~ 220 (416)
+.++......
T Consensus 426 ~~lll~~~~~ 435 (448)
T COG2271 426 AILLLLPVWN 435 (448)
T ss_pred HHHHHHHHHh
Confidence 7666654443
No 197
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.82 E-value=3.8e-07 Score=88.30 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=82.8
Q ss_pred HHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc--c--chhHHHHHH
Q 014905 57 GPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK--H--SSEYKILML 129 (416)
Q Consensus 57 ~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~--~--~~~~~~l~~ 129 (416)
..++ |.| +.+|.++.+.|+......++..++.++.|++.||+|||+.+.++.....++.. .. . ..+.+.+..
T Consensus 275 ~~~~-p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (485)
T TIGR00711 275 FYLL-PLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIAL 353 (485)
T ss_pred HHHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 3344 656 46899999999999999999999999999999999999999988777777666 33 2 235566777
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHH
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAI 171 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~ 171 (416)
..++.|++.+...++... ...+. ++|+...+..+.....|.
T Consensus 354 ~~~l~g~g~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~g~ 397 (485)
T TIGR00711 354 PQFIRGFGMGCFFMPLTT-IALSGLPPHKIARGSSLSNFTRQLGG 397 (485)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCHHHHhHHHHHHHHHHHHHH
Confidence 788899998887765555 44433 667776555444433333
No 198
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.81 E-value=3.3e-07 Score=87.17 Aligned_cols=130 Identities=18% Similarity=0.194 Sum_probs=94.6
Q ss_pred HHHHHHHhHHHHHHHHH-H-HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch--
Q 014905 48 LMMAGDWLQGPYVYYLY-S-TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS-- 122 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~-~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~-- 122 (416)
+...+........ +.| + .+|.+ ...+.+.....++..++.+++++++||+|+|+.+..+....+++.+ ..+.+
T Consensus 236 ~~~~~~~~~~~~~-~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~ 313 (428)
T PF13347_consen 236 LQWLAFALMNTFL-PYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPG 313 (428)
T ss_pred HHHhhhhhhhhHH-HHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhh
Confidence 4445555555554 545 4 34444 6778888899999999999999999999999999999888888777 55554
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh------cccCcchhhHHHHHHHHHHHHhhHHHH
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH------NKRGFDQQWLSETFSKAIFLGNGLVAI 180 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~------~~r~~~~~~~~~~~~~~~~~G~~~~~~ 180 (416)
|.+.+++..++.|++.+.......+ +++|. +...+..+...+.++...-+|.+++..
T Consensus 314 ~~~~~~i~~~l~gi~~~~~~~~~~a-~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 314 SPWLVLILFILAGIGYGAFFVIPWA-MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred hHHHHHHHHHHhHhhhccccccccc-ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 8999999999999999988877777 77754 111233444556666666666633333
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.80 E-value=4.2e-07 Score=83.88 Aligned_cols=114 Identities=22% Similarity=0.244 Sum_probs=85.4
Q ss_pred HHHHHHHhHHHHHHHHH--HHcCCC-hhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc--
Q 014905 48 LMMAGDWLQGPYVYYLY--STYGFG-KGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-- 121 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~--~~~~~s-~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-- 121 (416)
...........++ |.| +++|.+ ..+.+.+.+...+...++.++.|+++||+|+|+..........+..+ ....
T Consensus 217 ~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 217 LFFFVFSGFSFFL-PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHH-HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred HHHHHHHHhhccc-chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455566666 666 789999 79999999999999999999999999999998887777666555554 3333
Q ss_pred -hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhH
Q 014905 122 -SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWL 163 (416)
Q Consensus 122 -~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~ 163 (416)
++....+...++.|++.+...+...+ ++.|. ++|++..+..
T Consensus 296 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~ 340 (352)
T PF07690_consen 296 SSSPVWLIIALFLIGFGFGIVFPILFS-LIQELVPPEYRGTAFGLF 340 (352)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHCHHHHH-HHHCCCHTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHH
Confidence 34567777888899998888888787 77765 5566664444
No 200
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.79 E-value=1.1e-06 Score=82.77 Aligned_cols=154 Identities=12% Similarity=0.087 Sum_probs=81.5
Q ss_pred HHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh---hcc----chhHHHHHHHH--
Q 014905 62 YLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV---TKH----SSEYKILMLGR-- 131 (416)
Q Consensus 62 ~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l---~~~----~~~~~~l~~~r-- 131 (416)
|.| ++ +++.........+..+...+..|++|+++||+|+||++.++.+...+... ... ..+++.+.+.-
T Consensus 276 p~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~ 354 (462)
T PRK15034 276 AMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMG 354 (462)
T ss_pred HHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 555 32 33333333334456678889999999999999999999988765555432 111 12455444443
Q ss_pred --HHHHhhhhhhhhhhhhhhhhh-hccc-C-----------cchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccC
Q 014905 132 --IFGGIATSLLFSAFESWLVAE-HNKR-G-----------FDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALG 196 (416)
Q Consensus 132 --~l~G~~~~~~~~~~~~~~i~e-~~~r-~-----------~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~ 196 (416)
+..|+|.|..+-..+. +..+ ..++ + .+..-.....++.... .++++.+-|..-+...+.. .+
T Consensus 355 l~~~~G~gngsvfk~ip~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~-G~~Ggf~~p~~~g~~~~~~-g~ 431 (462)
T PRK15034 355 LFLTAGLGSGSTFQMIAV-IFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAI-GAVGGFFIPQAFGMSLNMT-GS 431 (462)
T ss_pred HHHHhcccchHHHHhhHH-HHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHH-HHcccchhhHHHHHHHHHc-CC
Confidence 3345555555433333 2222 0000 0 0000111222222222 1222245554444444443 36
Q ss_pred chhHHHHHHHHHHHHHHHHHHhc
Q 014905 197 PVAPFDAAACFLAFGMVIILASW 219 (416)
Q Consensus 197 w~~~f~~~~~~~~~~~~~~~~~~ 219 (416)
+...|+...+..+++..+.+...
T Consensus 432 ~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 432 PVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889998888888888877553
No 201
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.78 E-value=7.6e-08 Score=66.50 Aligned_cols=67 Identities=25% Similarity=0.280 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHH
Q 014905 44 IVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCIT 111 (416)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~ 111 (416)
..+++...+.+...|++ |+| ++.|+|+.|+|.+.++..+...++++++|.++||++|++..+.....
T Consensus 7 ~~yf~~f~~~g~~~Pfl-~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFL-PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhh-hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34445566777888999 888 89999999999999999999999999999999999999887776544
No 202
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.77 E-value=2.5e-07 Score=83.59 Aligned_cols=148 Identities=11% Similarity=0.106 Sum_probs=108.9
Q ss_pred HHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhh
Q 014905 62 YLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIAT 138 (416)
Q Consensus 62 ~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~ 138 (416)
..| .++|++..++.++.....+..++++++.|++.||+|.|+++..+.+...+.++ ..+......+.+.-.+.|.+.
T Consensus 276 ~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~ 355 (438)
T COG2270 276 GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSL 355 (438)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhc
Confidence 455 59999999999999999999999999999999999999999999888887777 445555556666778899999
Q ss_pred hhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 014905 139 SLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 139 ~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 216 (416)
|.....+.+ +..+.-+.++.+..+ +.+++..-.+. .++|.+-+.+.+.. .+-|..+....++..+.++...
T Consensus 356 G~~qA~SRS-y~~~lvp~~k~~~fF-glyaltgra~S----~~gp~lv~v~t~iT-g~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 356 GGAQASSRS-YLARLVPKGKEGRFF-GLYALTGRAAS----FLGPFLVAVITQIT-GSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred chHHHHHHH-HHHHhCCCcccccee-ehhhhhhhHHH----HHHHHHHHHHHHHh-cchhhHHHHHHHHHHhhHhhEE
Confidence 999999999 888663333332224 44444444445 67777777666654 2567776666666666655554
No 203
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1.4e-06 Score=81.22 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=79.3
Q ss_pred HHHHHHHhHHHHHHHHHH--HcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch--
Q 014905 48 LMMAGDWLQGPYVYYLYS--TYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS-- 122 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~--~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~-- 122 (416)
+...+..+..... ..|- .+|.++.+..+.......+.+++.+++.++++|+|||+++.++.++.+++.+ ..+.+
T Consensus 247 ~~~~~~~i~~s~~-~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~ 325 (467)
T COG2211 247 LLFIAFNIRGSIM-VYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAG 325 (467)
T ss_pred HHHHHHHHHhhhh-heeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 4444555554443 4442 4566666777777777888888899999999999999999999998888877 55554
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH 153 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (416)
+.++.++..++.+++.+...+...+ +++|.
T Consensus 326 ~~~l~~~~~~i~~~g~~~~~~l~wa-m~~d~ 355 (467)
T COG2211 326 SVVLIVVALIIAGVGTGIANPLPWA-MVADT 355 (467)
T ss_pred chHHHHHHHHHHHHHhhccccccHH-Hhcch
Confidence 7888899999999999988877777 77733
No 204
>PRK09669 putative symporter YagG; Provisional
Probab=98.75 E-value=2.9e-06 Score=81.15 Aligned_cols=118 Identities=16% Similarity=0.099 Sum_probs=77.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh---hccchhHHHHHHHHHHHHhhhhhhhhhhhh
Q 014905 71 KGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV---TKHSSEYKILMLGRIFGGIATSLLFSAFES 147 (416)
Q Consensus 71 ~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (416)
++..+.+.....+..+++.+++++++||+|||+.+..+.....+..+ ....++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566667788888999999999999999999888665553222 222457777888888999999988887777
Q ss_pred hhhhhh-----cccCc-chhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 148 WLVAEH-----NKRGF-DQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 148 ~~i~e~-----~~r~~-~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
+++|. .+.|+ ..+...+..+...-+|. .+++.+++.+.+..
T Consensus 343 -m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~----alg~~i~g~ll~~~ 389 (444)
T PRK09669 343 -MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGL----AIGGAVVGWILAWV 389 (444)
T ss_pred -HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHH----HHHHHHHHHHHHHc
Confidence 87744 12232 22233344444455555 55556665555544
No 205
>TIGR00898 2A0119 cation transport protein.
Probab=98.71 E-value=1.9e-06 Score=83.91 Aligned_cols=143 Identities=14% Similarity=0.013 Sum_probs=90.6
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhH--HHHHHHHHHHHhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEY--KILMLGRIFGGIATSLL 141 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~--~~l~~~r~l~G~~~~~~ 141 (416)
++++.+..... ....+....+.+..+++.||+|||+.+.++.+..+++.+ ..+.++. +...+..++.+++.+..
T Consensus 351 ~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (505)
T TIGR00898 351 GNLGGNIYLDL---FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSA 427 (505)
T ss_pred cccCCChHHHH---HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHH
Confidence 45555543333 344556677888899999999999999998877777666 4444332 44455556666666666
Q ss_pred hhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 014905 142 FSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 142 ~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
.+.... +..|. +.|+...++.+.. ..+|. +++|.+.+ ..+. ++..++.+.+...++..+... +
T Consensus 428 ~~~~~~-~~~e~~p~~~r~~~~g~~~~~----~~ig~----~i~p~i~~-~~~~---~~~~~~~~~~~~~~~~~~~~~-~ 493 (505)
T TIGR00898 428 FQMVYL-YTAELYPTVVRNLGVGVCSTM----ARVGS----IISPFLVY-LGEK---WLFLPLVLFGGLALLAGILTL-F 493 (505)
T ss_pred HHHHHH-HhcccccHHHHhhhHhHHHHH----HHHHH----HHHhHHHH-HHHH---HHhhHHHHHHHHHHHHHHHHH-c
Confidence 666666 77766 5677764444222 22334 66777766 3333 667788887777777666655 5
Q ss_pred cccCCC
Q 014905 219 WTENYG 224 (416)
Q Consensus 219 ~~~~~~ 224 (416)
.||+++
T Consensus 494 lpet~~ 499 (505)
T TIGR00898 494 LPETKG 499 (505)
T ss_pred CcCCCC
Confidence 666543
No 206
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.71 E-value=4.9e-06 Score=78.74 Aligned_cols=143 Identities=14% Similarity=0.144 Sum_probs=82.3
Q ss_pred HHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-h-----ccchhHHHHHHHHHH
Q 014905 62 YLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-T-----KHSSEYKILMLGRIF 133 (416)
Q Consensus 62 ~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~-----~~~~~~~~l~~~r~l 133 (416)
|.+ +.+|.++.+.++.......+..+++...+++.+|..+++..........++.. . ...++++..++..++
T Consensus 242 P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l 321 (413)
T PRK15403 242 PVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSL 321 (413)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 544 56799999999998888888888888888877555544443222221112111 1 123344445677888
Q ss_pred HHhhhhhhhhhhhhh-hhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHH
Q 014905 134 GGIATSLLFSAFESW-LVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGM 212 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~-~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~ 212 (416)
.++|.+...+...+. +..+..++|.+.+..+.....+ . ..++..++++.+. +-+.+|...+++..+..
T Consensus 322 ~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~----~----~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 322 YAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMV----M----AVSVEIGRWLWFN---GGRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHH----H----HHHHHHHHHHHHc---CCchHHHHHHHHHHHHH
Confidence 888888887766630 2223345677655443332222 2 3344555555444 55677766666555544
Q ss_pred HHH
Q 014905 213 VII 215 (416)
Q Consensus 213 ~~~ 215 (416)
...
T Consensus 391 ~~~ 393 (413)
T PRK15403 391 VFT 393 (413)
T ss_pred HHH
Confidence 443
No 207
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.68 E-value=3.4e-06 Score=81.35 Aligned_cols=135 Identities=13% Similarity=0.110 Sum_probs=85.0
Q ss_pred HHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc-----cchh
Q 014905 51 AGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK-----HSSE 123 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~-----~~~~ 123 (416)
........+. +.| ++...+++..+.+.+...++.+++.+++++++||+|||+.+.++.....++.+ .. ..++
T Consensus 245 ~~~~~~~~~~-~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (473)
T PRK10429 245 IASNIINGFA-IYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHN 323 (473)
T ss_pred HHHHHHhhhe-eeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchh
Confidence 3334443343 333 44444566777777777788999999999999999999999888766555444 21 2345
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-----cccCc-chhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH-----NKRGF-DQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD 191 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-----~~r~~-~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 191 (416)
.+.+++.-++.|++.+...+...+ +++|. .+.|+ ..+...+..+...-+|. .+++.+.+.+.+
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~a-m~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~----al~~~i~g~~l~ 392 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVI-MVADTVDYGEYKLGIRCESIAYSVQTMVVKGGS----AFAAFFIGVVLG 392 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhhhhhHhcCccchhHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 677777778888888888777677 77754 11222 22223344444444555 455555555444
No 208
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.68 E-value=5.2e-06 Score=78.07 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=75.8
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHH-HHHhhhh-hc--cchhHHHHHHHHHHHHhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCI-TYMLSCV-TK--HSSEYKILMLGRIFGGIATSL 140 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~-~~~~~~l-~~--~~~~~~~l~~~r~l~G~~~~~ 140 (416)
+.+|.++.+.|++.....++..+++++.+++.||++|+........ ...+... .. ...+.+.+.....+.|++.+.
T Consensus 236 ~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 315 (394)
T PRK11652 236 AVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGM 315 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 4589999999999999899999999999999999984443332222 2222212 11 123567777788899999998
Q ss_pred hhhhhhhhhhhhh--cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 014905 141 LFSAFESWLVAEH--NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLV 190 (416)
Q Consensus 141 ~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 190 (416)
..+...+ +..|. ++++...+.. +....+|. .+++.+++...
T Consensus 316 ~~~~~~~-~~~~~~~~~~g~~~~~~----~~~~~lg~----~~~~~~~~~~~ 358 (394)
T PRK11652 316 LFPLATS-GAMEPFPYLAGTAGALL----GGLQNIGS----GLAALLSAMLP 358 (394)
T ss_pred HHHHHHH-HHHhhccccchHHHHHH----HHHHHHHH----HHHHHHHHHcc
Confidence 8887777 66665 4445543333 33333444 55556665544
No 209
>TIGR00895 2A0115 benzoate transport.
Probab=98.67 E-value=7.2e-07 Score=83.76 Aligned_cols=126 Identities=15% Similarity=0.106 Sum_probs=87.3
Q ss_pred HHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH
Q 014905 53 DWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG 130 (416)
Q Consensus 53 ~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~ 130 (416)
......+. |.+ +++|.++.+.+...+...++..++.++.|+++||+|||+.+...........+ ....++.+...+.
T Consensus 266 ~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
T TIGR00895 266 VYFLTNWL-PKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLL 344 (398)
T ss_pred HHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 33344455 544 78999999999999999999999999999999999999655544443333333 2235567777788
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNL 188 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~ 188 (416)
.++.|++.+...+...+ ++.|. ++|+...++.+... .+|. .++|.+.+.
T Consensus 345 ~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~----~~g~----~~g~~~~G~ 396 (398)
T TIGR00895 345 GAIAGFFVNGGQSGLYA-LMALFYPTAIRATGVGWAIGIG----RLGA----IIGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHHHHHHH-HHhhcCCHHHHHHHHHHHHHHH----HHHH----HHHHHhHHh
Confidence 88999999888887777 77765 56666644443322 2333 555555553
No 210
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.66 E-value=2.5e-06 Score=91.51 Aligned_cols=141 Identities=9% Similarity=-0.140 Sum_probs=94.2
Q ss_pred HHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-----------
Q 014905 56 QGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS----------- 121 (416)
Q Consensus 56 ~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~----------- 121 (416)
....+ |.| +.+|.++.+.|++.+...++.+++++..|+++||.++++.+..+.++.++..+ ..+.
T Consensus 244 ~~~~~-p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (1140)
T PRK06814 244 VLSQL-PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQL 322 (1140)
T ss_pred HHHHh-HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccc
Confidence 33455 555 56899999999999999999999999999999988877766555444433332 2221
Q ss_pred ---------hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 014905 122 ---------SEYKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLL 189 (416)
Q Consensus 122 ---------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~ 189 (416)
++.+.+.+..++.|++.+...+...+ ++.+. +.||+..+..+.....+. .+++.+.+.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~~~G~v~g~~~~~~~~~~--------~ig~~~~g~l 393 (1140)
T PRK06814 323 KSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFA-ALQAWANPAHRARVIAANNVLNAAFM--------VAGTIILALL 393 (1140)
T ss_pred cchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHH-HHHhhCCcccceeeeHHHHHHHHHHH--------HHHHHHHHHH
Confidence 56777888889999999988887777 76655 778888665544443333 3333444444
Q ss_pred HhhhccCchhHHHHHHHH
Q 014905 190 VDTLALGPVAPFDAAACF 207 (416)
Q Consensus 190 ~~~~~~~w~~~f~~~~~~ 207 (416)
.+.. .++...+.+.+..
T Consensus 394 ~~~~-~~~~~~~~~~~~~ 410 (1140)
T PRK06814 394 QALG-FSIPWIILFIALA 410 (1140)
T ss_pred HHhc-cCHHHHHHHHHHH
Confidence 3221 2555555544443
No 211
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.66 E-value=5.8e-06 Score=75.80 Aligned_cols=296 Identities=13% Similarity=0.056 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 014905 75 GQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH 153 (416)
Q Consensus 75 g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (416)
+.+.-+-.+..++..+.+-++.+|...+.=......+..++.+ .+++++.+.-+++-.+.+++.|........ +..-.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLS-LTHFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHH-HHHhc
Confidence 4566666677778888888889998855555555667777777 788899998888889999888877665555 54433
Q ss_pred cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCCCC--c---cc
Q 014905 154 NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENYGD--P---EK 228 (416)
Q Consensus 154 ~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~---~~ 228 (416)
+++. + ..++.|...++ ++|+..-..+.+ .+.+.|..+.+...+.++..+..+...|+++.+ . +.
T Consensus 141 ~~~~-----l-~~wssGTG~aG----l~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~ 209 (402)
T PF02487_consen 141 GKSS-----L-SAWSSGTGGAG----LVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES 209 (402)
T ss_pred Cccc-----c-ccccCCcChhh----HHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC
Confidence 4322 2 33333333323 444443333332 323557777776666554444444333321110 0 00
Q ss_pred -hhh-----HH---------HhhhHHHhhhcc-hhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCchHHHH----HH
Q 014905 229 -KNL-----LA---------QFKGAALAIASD-ERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIF----AT 288 (416)
Q Consensus 229 -~~~-----~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~ 288 (416)
++. .+ ..+.++++-++. |+.+...+-.......-|..+....|...-.....+..-.+ ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~ 289 (402)
T PF02487_consen 210 EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLL 289 (402)
T ss_pred CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHH
Confidence 000 00 001122222221 33333333333344455544444455544332222222233 33
Q ss_pred HHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcch
Q 014905 289 FMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFW 368 (416)
Q Consensus 289 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 368 (416)
+.+|..+++--. .- ++.|+..+.. .+..+-+.+...-.... +-.+.|..++..+.-|+..|..+
T Consensus 290 YQ~GVFISRSS~----~~--~rir~lwils-~LQ~~nl~~~~l~s~~~---------fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 290 YQLGVFISRSSL----PF--FRIRRLWILS-LLQVINLVFLLLQSWYR---------FIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHhhhhcce----ee--eehhhHHHHH-HHHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHhhhHHH
Confidence 344444433221 11 3334433332 22221221111111000 00056667777777788888888
Q ss_pred hHHHHHHhccCCccccceeeeeeeccccee
Q 014905 369 PSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 369 ~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
...+..+.|..|+|+|--++|...+.-..+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~G 383 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLG 383 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHH
Confidence 888888899999999988888776655444
No 212
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.65 E-value=1.6e-05 Score=72.30 Aligned_cols=177 Identities=19% Similarity=0.223 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh-hhCchHHHHHHHHHHHhhhh
Q 014905 40 NSYIIVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD-KQGRKRACVTYCITYMLSCV 117 (416)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D-r~Grr~~l~~~~~~~~~~~l 117 (416)
++++...++..++..++.+.++|.= +-+|+|..|...+.+....+.+++-...|++.. |.++|+.-.+++....++..
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 4566666688889999999995544 899999999999999999999999999999888 67778877777766665443
Q ss_pred ----hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 118 ----TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 118 ----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
.+...+.+.+...-++.|++.|.......+ ..-+...+++..-.+ +.++..+..+.+++..+|..+-.......
T Consensus 291 lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals-~mM~lt~~~~aG~~m-G~WGaaQA~A~Glg~~~GG~~~D~~~~~~ 368 (403)
T PF03209_consen 291 LIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALS-LMMDLTSAGRAGLFM-GAWGAAQAIARGLGTFLGGALRDLVRALF 368 (403)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHH-HHHhCCCCcchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345567899999999999999998887777 555553333333224 66666666666555455555433322221
Q ss_pred ----ccCchhHHHHHHHHHHHHHHHHHHh
Q 014905 194 ----ALGPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 194 ----~~~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
..+|..+|.+-++..+++.++....
T Consensus 369 ~~~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 369 GNSPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1256777777777777777666533
No 213
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.65 E-value=1.7e-06 Score=80.69 Aligned_cols=135 Identities=19% Similarity=0.151 Sum_probs=82.7
Q ss_pred hHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhC-chHHHH-HHH-HHHHhhhh-hcc--chhHHH
Q 014905 55 LQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQG-RKRACV-TYC-ITYMLSCV-TKH--SSEYKI 126 (416)
Q Consensus 55 ~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~G-rr~~l~-~~~-~~~~~~~l-~~~--~~~~~~ 126 (416)
....+. |.+ +++|.++.+.+.+.+...++..++.++.|+++||.. ||+... ... .....+.. ... ..+.+.
T Consensus 234 ~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (379)
T TIGR00881 234 GILDWS-PLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLM 312 (379)
T ss_pred HHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHH
Confidence 344455 555 578999999999999999999999999999999864 333222 221 12222222 222 335555
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHH
Q 014905 127 LMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPF 201 (416)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f 201 (416)
..+..++.|.......+.... +..|. ++|+...+.. +....+|. .++|.+.+.+.+.. ||+..|
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~----~~~~~~g~----~~~~~~~g~l~~~~--g~~~~f 379 (379)
T TIGR00881 313 DLICLFALGFLVYGPQMLIGV-IASELAPKKAAGTAAGFV----GFFAYLGG----ILAGLPLGYLADGF--GWAGAF 379 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHH-HHHHhcCcchhHHHHHHH----HHhhhhhh----hhhhhhHHHHHHhh--cccccC
Confidence 566666677655444443344 45544 5566664433 33333444 67778888888876 888654
No 214
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.60 E-value=1.4e-06 Score=79.33 Aligned_cols=125 Identities=20% Similarity=0.237 Sum_probs=83.0
Q ss_pred HHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh----hhCchHHHHHHH-HHHHhhhh-hccchh
Q 014905 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD----KQGRKRACVTYC-ITYMLSCV-TKHSSE 123 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D----r~Grr~~l~~~~-~~~~~~~l-~~~~~~ 123 (416)
.++......+++|..+++|++....+.+-....+...+.+|+.|..+| ||||||..+... ....++.. ..++.+
T Consensus 45 qf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaD 124 (498)
T KOG0637|consen 45 QFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAAD 124 (498)
T ss_pred HHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhh
Confidence 445556666775555999999999999999999999999999999999 689999887763 33333433 444432
Q ss_pred H-----------------HHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCc-chhhHHHHHHHHHHHHh
Q 014905 124 Y-----------------KILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGF-DQQWLSETFSKAIFLGN 175 (416)
Q Consensus 124 ~-----------------~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~-~~~~~~~~~~~~~~~G~ 175 (416)
+ ..++++-.+.=++......++.+ ++.|. +++.+ ++++.....++|..+|.
T Consensus 125 ig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra-~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 125 IGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRA-LLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred hhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHH-HHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 2 33444444555566677777888 88855 22222 65555455555444444
No 215
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.60 E-value=2.5e-06 Score=80.65 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=80.6
Q ss_pred HHhHHHHHHHHHHHc--CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHH-HHHHHHHHHhhhh-hccchhHHHHH
Q 014905 53 DWLQGPYVYYLYSTY--GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRA-CVTYCITYMLSCV-TKHSSEYKILM 128 (416)
Q Consensus 53 ~~~~~~~l~~l~~~~--~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~-l~~~~~~~~~~~l-~~~~~~~~~l~ 128 (416)
......++++.++++ |.++.+.+...+...++..++.+..|+++||++||+. .........++.. ....++.....
T Consensus 258 ~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (412)
T TIGR02332 258 LSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQL 337 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 344456773434654 6788888999999999999999999999999997774 3333333333333 22222222222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 129 LGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
.+-.+.+.+.....+.... ...|. ++|+...++.+.. ..+|. .++|.+.+.+.+.. .+|+..+++.+
T Consensus 338 ~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~a~g~~~~~----~~~g~----~~~p~~~g~i~~~~-g~~~~~~~~~~ 407 (412)
T TIGR02332 338 LGIIMASMGSFSAMAIFWT-TPDQSISLQARAIAIAVINAT----GNIGS----ALSPFLIGILKDAT-GSFNSGLWFVA 407 (412)
T ss_pred HHHHHHHHHhhhhhhHHHh-hcccccchHHHHHHHHHHHHh----hhhhh----hhhhhhcccccccC-CCCchhHHHHH
Confidence 2222222222222221112 22222 4556653333222 22334 66777777777654 24888887766
Q ss_pred HHH
Q 014905 206 CFL 208 (416)
Q Consensus 206 ~~~ 208 (416)
+..
T Consensus 408 ~~~ 410 (412)
T TIGR02332 408 ALL 410 (412)
T ss_pred HHH
Confidence 543
No 216
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.59 E-value=6.1e-07 Score=80.25 Aligned_cols=162 Identities=19% Similarity=0.120 Sum_probs=107.6
Q ss_pred HHHHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhC--chHHHHHHHHHHHhhhh-hccch
Q 014905 48 LMMAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQG--RKRACVTYCITYMLSCV-TKHSS 122 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~~l-~~~~~ 122 (416)
..+.+..+.-|-+ +++ |+...+..++|+.+--..+.+.++..+.|.++||++ |-.....+++.....+. ..+++
T Consensus 281 ~~n~~lafLePtl-slwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~ 359 (464)
T KOG3764|consen 281 FSNSSLAFLEPTL-SLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT 359 (464)
T ss_pred hccchHHHhCccc-HHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh
Confidence 4556667777877 666 677756669999999999999999999999999999 43333444555555555 66788
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhh---hh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCch
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVA---EH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPV 198 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~---e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~ 198 (416)
++..+.+-++..+++.+........ .+. |. +..+.. .+...+.++.. +..++..+||.+++.+.+.. |++
T Consensus 360 ~~~~L~vp~~~l~~~i~~~dasl~P-~l~~lvd~rh~s~~~--vYGsVyaIad~-a~sla~a~GP~~gg~iv~~i--GF~ 433 (464)
T KOG3764|consen 360 SIAQLWVPNFGLGFGIGLADASLIP-TLGYLVDPRHVSGFN--VYGSVYAIADA-AFSLAYAIGPTFGGSLVEAI--GFE 433 (464)
T ss_pred hHHHHhhhhHHHHHHHHHHHHHHhh-hhHHhcchhhccccc--eeeeHHHHHHH-HHHHhhhccccccchheeeh--hHH
Confidence 8888888887777776655443322 222 22 222111 12233333332 24455589999999998886 888
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 014905 199 APFDAAACFLAFGMVIIL 216 (416)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~ 216 (416)
|.-.+.+...++-..+..
T Consensus 434 wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 434 WLMTIIGILNLIYAPVLL 451 (464)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 877777776666555444
No 217
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.54 E-value=1.8e-06 Score=73.69 Aligned_cols=169 Identities=14% Similarity=0.205 Sum_probs=96.1
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHH--HHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHH-H
Q 014905 37 SFMNSYIIVYSLMMAGDWLQGPYV--YYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCI-T 111 (416)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l--~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~-~ 111 (416)
.++..++.+..+...-.-...|++ -|.+ +++|+|+...+-+.+..+..+++.+|+.|.++||+||+...+.+.. .
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACIL 340 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHH
Confidence 344445555444433333444543 1333 7899999999999999999999999999999999999998887744 3
Q ss_pred HHhhhhhccchhHHHHHHHHHHHHhhhhh----hhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 014905 112 YMLSCVTKHSSEYKILMLGRIFGGIATSL----LFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGN 187 (416)
Q Consensus 112 ~~~~~l~~~~~~~~~l~~~r~l~G~~~~~----~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~ 187 (416)
...+-. ...-+++.=..+..+.|++.+. .+|.... +++ .++.|.+.+..+...+.| - .+.|.+++
T Consensus 341 tl~~H~-~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~-~vp-E~qLGTaygf~qsIqNLg----l----a~i~Iiag 409 (459)
T KOG4686|consen 341 TLLGHS-GLFFTFLSPYTSMTFLGLSYSLLACSLWPCVAS-LVP-EEQLGTAYGFIQSIQNLG----L----AFIPIIAG 409 (459)
T ss_pred HHHHhh-hHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhh-hCC-HHHhcchHHHHHHHHhhh----h----hHHhhhhh
Confidence 333333 1122223333455566665554 3443333 333 356677755554554444 3 44455666
Q ss_pred HHHhhhc-cCchhHHHHH-HHHHHHHHHHHH
Q 014905 188 LLVDTLA-LGPVAPFDAA-ACFLAFGMVIIL 216 (416)
Q Consensus 188 ~~~~~~~-~~w~~~f~~~-~~~~~~~~~~~~ 216 (416)
.+.+.-+ ..|--.|.+. +.+.+....+.+
T Consensus 410 ~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 410 FIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred eeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 5555431 1344444443 334444444443
No 218
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.54 E-value=1.8e-05 Score=74.64 Aligned_cols=153 Identities=17% Similarity=0.132 Sum_probs=93.8
Q ss_pred HHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc----hhH--H---HHHHHHH
Q 014905 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS----SEY--K---ILMLGRI 132 (416)
Q Consensus 63 l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~----~~~--~---~l~~~r~ 132 (416)
++++.|++..+.-+..........+..+.+..+.||+|||+.++.++....+..+ .... +.. | ..+++.+
T Consensus 296 i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~ 375 (485)
T KOG0569|consen 296 IFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIF 375 (485)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3488999999999999999999999999999999999999999998666655443 2111 111 1 2234444
Q ss_pred HHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014905 133 FGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
+..++.+....+..--+.+|. +.|..+.++. .....+.+ .+-...-..+.+.. |- ..|+...+.++
T Consensus 376 ~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~----~~~~w~~~----fiv~~~fp~l~~~~--g~-~~filF~i~~~ 444 (485)
T KOG0569|consen 376 LFIISFAIGPGPIPWFIGAELFPQSARSAAQSVA----TAVNWLSN----FIVGFAFPPLQNVI--GP-YVFILFVIPLA 444 (485)
T ss_pred HHHHhhhcCCCchhHHHHHHhCCccchHHHHHHH----HHHHHHHH----HHHHHHHHHHHHHh--cc-hhhHHHHHHHH
Confidence 444444433333333134455 4455442222 11122223 22222222333333 44 67788888888
Q ss_pred HHHHHHHHhcccCCCCc
Q 014905 210 FGMVIILASWTENYGDP 226 (416)
Q Consensus 210 ~~~~~~~~~~~~~~~~~ 226 (416)
+..+..++..||++.+.
T Consensus 445 ~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 445 IFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHHhCcccCCCC
Confidence 88888888899988554
No 219
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.1e-06 Score=84.32 Aligned_cols=158 Identities=18% Similarity=0.148 Sum_probs=115.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhC--chHHHHHHHHHHHhhhh-hccchh
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQG--RKRACVTYCITYMLSCV-TKHSSE 123 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~G--rr~~l~~~~~~~~~~~l-~~~~~~ 123 (416)
+...+......++ |.+ ++.++++.+...+.++..+...++.+..|+++|+.. ++.+..++.+..+++.+ ..+.++
T Consensus 309 ~~~~g~~~p~~~l-~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~ 387 (509)
T KOG2504|consen 309 FAYLGFNVPFVYL-PSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT 387 (509)
T ss_pred HHHHHHHHHHHHH-HHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3334444444455 555 899999999999999999999999999999999988 44455566667777766 888999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhH
Q 014905 124 YKILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAP 200 (416)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~ 200 (416)
++.+...-++.|++.|........ .+.|. ++-..+.++. .. . .+++.+++|.+++.+.+.. .+|...
T Consensus 388 ~~~l~~~~~~fG~~~g~~~~l~~~-i~~~~~g~~~l~~a~Gl~----l~---~-~gi~~l~gpPiag~~~d~t-g~Y~~~ 457 (509)
T KOG2504|consen 388 YVGLIVFSILFGFCVGSFSSLTPV-ILVDLVGLEKLSNAYGLL----LL---F-QGIGALVGPPIAGLLYDIT-GNYDHA 457 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcChhhcchHHHHH----HH---H-hHHHHHcCcccceeeeecc-CCeeee
Confidence 999999999999999877665544 45555 3333342222 22 2 4444588889988887776 249999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014905 201 FDAAACFLAFGMVIIL 216 (416)
Q Consensus 201 f~~~~~~~~~~~~~~~ 216 (416)
|+..++..+++.....
T Consensus 458 f~~~g~~~~~s~~~~~ 473 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVLLL 473 (509)
T ss_pred hhhcChHHHHHHHHHH
Confidence 9999888887775554
No 220
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.52 E-value=2.9e-05 Score=73.31 Aligned_cols=146 Identities=13% Similarity=0.106 Sum_probs=92.0
Q ss_pred hHHHHHHHHH-HHc--CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHH
Q 014905 55 LQGPYVYYLY-STY--GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLG 130 (416)
Q Consensus 55 ~~~~~l~~l~-~~~--~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~ 130 (416)
....++ +.| ++. +.+....+...+.+.....++.+..|++.||+++|+.+.++.....+..+ ....++... ...
T Consensus 250 ~~~s~l-~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~ 327 (410)
T TIGR00885 250 MCWTFI-IQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYC 327 (410)
T ss_pred HHHHHH-HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHH
Confidence 334555 555 443 34444445566666778889999999999999999998888777776666 445555333 455
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh---cc-CchhHHHHHH
Q 014905 131 RIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL---AL-GPVAPFDAAA 205 (416)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~---~~-~w~~~f~~~~ 205 (416)
-.+.|++.+..+|...+ ...+. .++.+..+ .....+ .+|. .+.|.+.+.+.|.. .. +.+..|++..
T Consensus 328 l~~~glf~s~~fp~i~s-l~~~~~g~~~~~~s---~~l~~~-~~Gg----a~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 328 LTLCSAFMSLMFPTIYG-IALKGLGQDTKYGA---AGLVMA-IIGG----GIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhhhhhhhhhhH---HHHHHH-Hhcc----chHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 66778888888887777 55555 33333211 111111 2445 88888888888742 11 4677777655
Q ss_pred HHHHHH
Q 014905 206 CFLAFG 211 (416)
Q Consensus 206 ~~~~~~ 211 (416)
++.+..
T Consensus 399 ~~~~~~ 404 (410)
T TIGR00885 399 LCFAVI 404 (410)
T ss_pred HHHHHH
Confidence 544443
No 221
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.52 E-value=0.00031 Score=66.50 Aligned_cols=248 Identities=10% Similarity=-0.040 Sum_probs=129.5
Q ss_pred HHHHHcCC-----ChhhHHHHHHHHHHHHHHH-HhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-----h-------
Q 014905 62 YLYSTYGF-----GKGEIGQLFIAGFGSSMLF-GTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-----S------- 122 (416)
Q Consensus 62 ~l~~~~~~-----s~~~~g~i~~~~~~~~~i~-~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-----~------- 122 (416)
|+-+++.. +.+.+.++.+...++..+. .++.+++++|++|++.+-+....+....+ .++. +
T Consensus 28 ~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~ 107 (472)
T TIGR00769 28 DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTAL 107 (472)
T ss_pred hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHH
Confidence 44455554 4467899999888877766 88999999999999988776444443222 1111 1
Q ss_pred -------------------hHHHHHHHHHHHHhhhhhhhh-hhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHH
Q 014905 123 -------------------EYKILMLGRIFGGIATSLLFS-AFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIIS 182 (416)
Q Consensus 123 -------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~ 182 (416)
+.|...+..+...+-...... ...+ +..|.-+.+.+.+.. ...+.|..+|. +++
T Consensus 108 ~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~-fandi~t~~qakRfy-~l~~~ganlg~----i~s 181 (472)
T TIGR00769 108 ADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWG-FANQITTIDEAKRFY-ALFGLGANVAL----IFS 181 (472)
T ss_pred HHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHH-HHHHHHHHHHH----HHH
Confidence 122222333333333333332 3334 555663334443344 66666666666 666
Q ss_pred HHHHHHHHhh------hccCch----hHHHHHHHHHHHHHHHHHHhcccC---CC------CccchhhHHHhhhHHHhhh
Q 014905 183 GLFGNLLVDT------LALGPV----APFDAAACFLAFGMVIILASWTEN---YG------DPEKKNLLAQFKGAALAIA 243 (416)
Q Consensus 183 ~~l~~~~~~~------~~~~w~----~~f~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~ 243 (416)
+.+..++.+. ....|. ..+.+.++...+...+.....++. ++ ++++++.+....++++.++
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~ 261 (472)
T TIGR00769 182 GRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLV 261 (472)
T ss_pred HHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHH
Confidence 6655554421 001232 233333333333333333222111 11 0011111223456888899
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC-c----hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHH
Q 014905 244 SDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI-P----HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQI 317 (416)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~ 317 (416)
|+|.+..+.....+...+.......|-....+...+. + .|......++..++..++.+++.+| .|......+
T Consensus 262 ~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~--~Gw~~~a~i 338 (472)
T TIGR00769 262 SSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK--YGWLTAALI 338 (472)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHH
Confidence 9998888877766665555554443443332221111 1 3444455566666666777999999 555544333
No 222
>PRK11462 putative transporter; Provisional
Probab=98.51 E-value=7.2e-05 Score=71.75 Aligned_cols=82 Identities=7% Similarity=-0.043 Sum_probs=51.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh-hhhhcc-c-hhHHHHHHHHHHHHhhhhhhhhhhh
Q 014905 70 GKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML-SCVTKH-S-SEYKILMLGRIFGGIATSLLFSAFE 146 (416)
Q Consensus 70 s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~-~~l~~~-~-~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (416)
++...+.+.+.+.++.+++.+++++++||+|+|+.+..+.....+ +.+..+ . .+.+.+++.-++.|++.+...+...
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677788888999999999999999999987755443333 222222 2 2333444455666777665554444
Q ss_pred hhhhhh
Q 014905 147 SWLVAE 152 (416)
Q Consensus 147 ~~~i~e 152 (416)
+ +++|
T Consensus 341 ~-m~ad 345 (460)
T PRK11462 341 V-MMSD 345 (460)
T ss_pred H-HHHH
Confidence 4 5553
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.48 E-value=1.1e-05 Score=69.43 Aligned_cols=104 Identities=19% Similarity=0.168 Sum_probs=78.3
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccc-------hhHHHHHHHHHHHHh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHS-------SEYKILMLGRIFGGI 136 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~-------~~~~~l~~~r~l~G~ 136 (416)
+++|+|.+|...+..+..++..+ +++.|.+.||+|+|.++.++.+...++.. ...+ .++|.+.+..++.|.
T Consensus 30 ~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~ 108 (250)
T PF06813_consen 30 SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN 108 (250)
T ss_pred HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc
Confidence 68999999999999999999876 58899999999999999999887777655 3221 356888888888888
Q ss_pred hhhhhhhhhhhhhhhhh--cccCcchhhHHHHHHHH
Q 014905 137 ATSLLFSAFESWLVAEH--NKRGFDQQWLSETFSKA 170 (416)
Q Consensus 137 ~~~~~~~~~~~~~i~e~--~~r~~~~~~~~~~~~~~ 170 (416)
+.+...++... ...++ ++||.+.++.-+..+++
T Consensus 109 s~~~~~ta~lv-t~~~NFP~~RG~vvgilk~~~GLS 143 (250)
T PF06813_consen 109 SSCWFNTASLV-TCVRNFPRSRGTVVGILKGFFGLS 143 (250)
T ss_pred cHHHhhhHHHH-HHHHhCccccCceehhhhHHHHhH
Confidence 77666554433 22223 78999977775554443
No 224
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.45 E-value=4.9e-06 Score=77.32 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=64.7
Q ss_pred HHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh---hccch--hHHHHHH
Q 014905 57 GPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV---TKHSS--EYKILML 129 (416)
Q Consensus 57 ~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l---~~~~~--~~~~l~~ 129 (416)
..+. |.| +.+|.++.+.+.+.+...+...++.++.|+++||+|||+.+..+......+.. ....+ +.+....
T Consensus 245 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (366)
T TIGR00886 245 SSIF-AMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIV 323 (366)
T ss_pred HHHH-HHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 3445 445 57899999999999999999999999999999999999887776554444333 22222 4544434
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhh--cccCcchh
Q 014905 130 GRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQ 161 (416)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~ 161 (416)
...+.++..+...+...+ +++|. ++++...+
T Consensus 324 ~~~~~~~~~g~~~~~~~~-~~~~~~~~~~g~~~g 356 (366)
T TIGR00886 324 LFVALFFFSGAGNGSTFA-LVPHIFRRATGAVSG 356 (366)
T ss_pred HHHHHHHHhccccchhhh-cchhhchhhcccHHH
Confidence 333333333333333333 44444 45555533
No 225
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.44 E-value=8.8e-05 Score=68.89 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=79.4
Q ss_pred HHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCch---HHHHH-HHHHHHhhhh-hccchhHH
Q 014905 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRK---RACVT-YCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 51 ~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr---~~l~~-~~~~~~~~~l-~~~~~~~~ 125 (416)
........++++.+++.|+|.. .+...+...+...++ .++++||.+|| +.... .....++... ....++.+
T Consensus 206 ~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~ 281 (368)
T TIGR00903 206 ALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRL 281 (368)
T ss_pred HHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccH
Confidence 3333444466333377788764 566666666555555 47777777643 33332 3333333333 33344444
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFD 202 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~ 202 (416)
...+.-.+.+++.....+...+ +.+|. +.|+...++.+..-..+ . ..+|.+.+.+. . +.+..|.
T Consensus 282 ~~~~~~~l~~~~~~~~~~~~~~-~~~~~~p~~~rgt~~G~~~~~g~~~----~----~~~~~~~~~~~--~--~~~~~f~ 348 (368)
T TIGR00903 282 ALFAFIGIAGLLMLPAYAIIMD-WIGKFCDKELHGKAAGAIGFTSRAI----S----VALALAAMLFI--S--SAEAYFT 348 (368)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-HHHHhcchhhcCcccchhhHHHHHH----H----HHHHHHHHHHh--c--CHHHHHH
Confidence 4444445566655555555555 66666 67888855553333332 3 44444444333 1 4556677
Q ss_pred HHHHHHHHHHHHHH
Q 014905 203 AAACFLAFGMVIIL 216 (416)
Q Consensus 203 ~~~~~~~~~~~~~~ 216 (416)
+.+...++..+...
T Consensus 349 ~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 349 FLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHH
Confidence 77766666665554
No 226
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.42 E-value=6.4e-06 Score=80.12 Aligned_cols=135 Identities=13% Similarity=-0.031 Sum_probs=70.9
Q ss_pred HHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch----hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-
Q 014905 80 AGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS----EYKILMLGRIFGGIATSLLFSAFESWLVAEH- 153 (416)
Q Consensus 80 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~- 153 (416)
...++..++.+..++++||+|||+.++++....+++.. ..... +...+...-+...+......+.... +.+|.
T Consensus 343 ~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~E~~ 421 (502)
T TIGR00887 343 IALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFI-VPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhh-hhhccC
Confidence 34456667888899999999999998888666555443 22211 1111111111111111112222233 44555
Q ss_pred --cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh--------ccCchhHHHHHHHHHHHHHHHHHHhcccCC
Q 014905 154 --NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL--------ALGPVAPFDAAACFLAFGMVIILASWTENY 223 (416)
Q Consensus 154 --~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~--------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 223 (416)
+.|++..++.+.... +|. .++|.+.+.+.+.. +.++...|.+.++..++..+.. ++.||++
T Consensus 422 p~~~R~~~~g~~~~~~~----~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~ 492 (502)
T TIGR00887 422 PTRYRSTAHGISAASGK----AGA----IIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETK 492 (502)
T ss_pred chhHHHHHHHHHHHHhh----hHH----HHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCC
Confidence 567776444432222 233 55556655555421 0145567777777776665544 3668765
Q ss_pred C
Q 014905 224 G 224 (416)
Q Consensus 224 ~ 224 (416)
.
T Consensus 493 ~ 493 (502)
T TIGR00887 493 G 493 (502)
T ss_pred C
Confidence 4
No 227
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.42 E-value=0.00056 Score=67.90 Aligned_cols=147 Identities=16% Similarity=0.219 Sum_probs=101.7
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHHHHhhhh-hccch--------hHHHHHHHHHHH
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCITYMLSCV-TKHSS--------EYKILMLGRIFG 134 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~l-~~~~~--------~~~~l~~~r~l~ 134 (416)
+.+|.++++...++..+....-+...+.|.++|+ +||++++.++.++..++.. ..+.. .....+++-.+.
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLi 95 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALI 95 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHH
Confidence 6789999999989998888888999999999995 7999999999888777766 43321 123356677778
Q ss_pred Hhhhhhhhhhhhhhhhhhh-c--ccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh-----ccCchhHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH-N--KRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL-----ALGPVAPFDAAAC 206 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~-~--~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~-----~~~w~~~f~~~~~ 206 (416)
.+|.|+.-+...+ ...|. + ++.+..+.. ..+..+..+|+ .+++.+..++.+.. ..+|...|.+.++
T Consensus 96 a~G~GgiKp~vsa-f~gdqf~~~~~~~~~s~F-~~fY~~iNiGS----lis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 96 ALGTGGIKPCVSA-FGGDQFEERQLSLRSRFF-SFFYFAINAGS----LISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HhhccccccCchh-hhHhhcCccchhHHHHHH-HHHHHHHHHHH----HHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 8899988888888 88865 2 222233334 33333334445 55555555544221 1269999999988
Q ss_pred HHHHHHHHHHH
Q 014905 207 FLAFGMVIILA 217 (416)
Q Consensus 207 ~~~~~~~~~~~ 217 (416)
..+++.+....
T Consensus 170 ~m~ia~lvf~~ 180 (654)
T TIGR00926 170 LMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHH
Confidence 88887766553
No 228
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.41 E-value=1.2e-06 Score=84.14 Aligned_cols=145 Identities=13% Similarity=0.051 Sum_probs=101.4
Q ss_pred hcchhHH-HHHHHHHHHHHHHHHHHHhhhcccccCC--CCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHH
Q 014905 243 ASDERIA-LLGAIQSLFEGSMYTFVFLWTPALSPND--EEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQ 316 (416)
Q Consensus 243 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~ 316 (416)
+++|+.. .+.....+-..+.+.... +.|.|+++. .+.+ .+.+.+....+..++.++.|++.||. .++||.+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~-~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~-~G~~~~l~ 83 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQG-ILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRV-WGTKKTMV 83 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhh-cchHHHHH
Confidence 3454444 343333333566666444 888888764 4553 78888888999999999999999994 57777777
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccc---cceeeeeeec
Q 014905 317 IVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFFRI 393 (416)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~---rg~~~g~~~~ 393 (416)
.+..+..+......... +.+...+...+.+++.|...|...+++++.+|+++ |++++++.+.
T Consensus 84 ~~~~~~~~g~~~~~~~~---------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~ 148 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSI---------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYM 148 (475)
T ss_pred HHHHHHHHHHHHHHhcc---------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHH
Confidence 77666665544433322 33445556667788888888999999999998764 8889999888
Q ss_pred ccceeeeeeee
Q 014905 394 PLNVFVCIVLY 404 (416)
Q Consensus 394 ~~~~~~~~~~~ 404 (416)
..|++..++..
T Consensus 149 ~~niG~~ig~~ 159 (475)
T TIGR00924 149 SINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHH
Confidence 88887665533
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.37 E-value=2.8e-05 Score=69.83 Aligned_cols=152 Identities=24% Similarity=0.259 Sum_probs=99.0
Q ss_pred HHHHhHHHHHHHHH-HHcCCCh--hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch--hH
Q 014905 51 AGDWLQGPYVYYLY-STYGFGK--GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS--EY 124 (416)
Q Consensus 51 ~~~~~~~~~l~~l~-~~~~~s~--~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~--~~ 124 (416)
.......+.. +.+ ++.+.+. .+.++..+...+...+++++.|.++||+|||+.+..+......+.+ ..+.. +.
T Consensus 16 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 16 LDLGLLSPAL-PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HhcchHHHHH-HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 4444555555 444 6666666 5889999999999999999999999999999888887654444433 44444 48
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhhcc----cCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhH
Q 014905 125 KILMLGRIFGGIATSLLFSAFESWLVAEHNK----RGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAP 200 (416)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~----r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~ 200 (416)
+.+.+.|...|++.+...+...+ ++.|..+ |+...+.... .....|. .+++.+++.+......+||..
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASA-LLSEWFPEATERGLAVGLVTL---GAGALGL----ALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHH-HHHHhcCchhHHHHHHHHHHH---HHHHHHH----HHHHHHHHHHHHHHhcchHHH
Confidence 99999999999999988888888 8887722 3333222211 1233333 444444333332211288986
Q ss_pred HHHHHHHHHHH
Q 014905 201 FDAAACFLAFG 211 (416)
Q Consensus 201 f~~~~~~~~~~ 211 (416)
|..........
T Consensus 167 ~~~~~~~~~~~ 177 (338)
T COG0477 167 FLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHH
Confidence 66666555433
No 230
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.35 E-value=2.6e-06 Score=81.16 Aligned_cols=140 Identities=11% Similarity=0.040 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccc-cchhHHHHHHHH
Q 014905 246 ERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSL-RVESYMQIVFII 321 (416)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~-~~~~~~~~~~~~ 321 (416)
+.++.+......-..+.|.... +.|.|+++..+.+ .+.+.........++.++.|+++|| . ++||.+..+..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~-~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR--ilGrrr~iliG~il 85 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRA-LLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK--VLGNRMAVMLGALL 85 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcHHHHHHHHHH
Confidence 4445544555555667777455 8899988766654 5666777778888899999999999 6 888887777766
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCcc--ccceeeeeeecccceee
Q 014905 322 SSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNFFRIPLNVFV 399 (416)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~--~rg~~~g~~~~~~~~~~ 399 (416)
..+...+...... +.........+..++.|...+...++++|.+|++ +|.+++++.....|++.
T Consensus 86 ~~lg~lll~~~~~--------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~ 151 (493)
T PRK15462 86 MAIGHVVLGASEI--------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGS 151 (493)
T ss_pred HHHHHHHHHHhhc--------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHH
Confidence 6655433321111 1122333444455666777787889999999986 69999999988888765
Q ss_pred eee
Q 014905 400 CIV 402 (416)
Q Consensus 400 ~~~ 402 (416)
.++
T Consensus 152 ~ia 154 (493)
T PRK15462 152 IIA 154 (493)
T ss_pred HHH
Confidence 543
No 231
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.34 E-value=1.6e-05 Score=76.27 Aligned_cols=120 Identities=18% Similarity=0.111 Sum_probs=87.1
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hc-c---------chhHHHHHHHHHH
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TK-H---------SSEYKILMLGRIF 133 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~-~---------~~~~~~l~~~r~l 133 (416)
+.+|.++.++|.+.....++.+++....+++.+|++.|+++.++.+..+++.+ .. . .++.+......++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 57899999999999999999999999999999999999999999888887664 21 1 1334455566788
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTL 193 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 193 (416)
.+++.+....+... ++.+. +.++...++.+...++|. .+++.+++.+.+..
T Consensus 361 ~~~~~g~~~~~~~~-~~~~~~p~~~egt~~al~~s~~~lg~--------~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 361 AEVLAQLKFMPFLV-LLARLCPSGCESSVFALLASILHLGS--------SVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHccHHH-HHHHhCCCCceehHHHHHHHHHHHHH--------HHHHHHHHHHHHHc
Confidence 88888888777777 77765 455555445544444444 44445555555444
No 232
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.30 E-value=0.00019 Score=65.02 Aligned_cols=149 Identities=13% Similarity=0.150 Sum_probs=100.6
Q ss_pred HHHHHHHhHHHHHHHHH-HH-cCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhH
Q 014905 48 LMMAGDWLQGPYVYYLY-ST-YGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEY 124 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~-~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~ 124 (416)
+..........++ +.| ++ .|.++.+.....+.+..+.++|....-++..|+...|.+.+..+...+-++ ..+.++.
T Consensus 247 lYVG~Eva~gsfl-~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~ 325 (422)
T COG0738 247 LYVGAEVAIGSFL-VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGV 325 (422)
T ss_pred HHHhHHHHHHHHH-HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 3344444556666 555 44 889999999999999999999999999999999999999888766666555 6666665
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHH
Q 014905 125 KILMLGRIFGGIATSLLFSAFESWLVAEH-NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDA 203 (416)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~ 203 (416)
+.+ .+-++.|...+..+|...+ .-.+. .+.....+ ... ....+|. .+-|.+-+++.|.. +-...+..
T Consensus 326 v~~-~~l~~ig~F~simfPTIfs-lal~~l~~~ts~~s---~~l-~maivGG----AiiP~l~G~i~d~~--g~~~~~~~ 393 (422)
T COG0738 326 VAL-YALFLIGLFNSIMFPTIFS-LALKNLGEHTSVGS---GLL-VMAIVGG----AIIPPLQGVIADMF--GIQLTFLI 393 (422)
T ss_pred HHH-HHHHHHHHHhHHHHHHHHH-HHHhccCccccccc---eee-eeheecc----hHHHHHHHHHHHhh--hhHHHHHH
Confidence 443 3457778888888887777 55544 22222111 111 1112334 77888889998887 77766663
Q ss_pred HHHHHH
Q 014905 204 AACFLA 209 (416)
Q Consensus 204 ~~~~~~ 209 (416)
...++.
T Consensus 394 ~pllc~ 399 (422)
T COG0738 394 VPLLCY 399 (422)
T ss_pred HHHHHH
Confidence 333333
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.29 E-value=1.5e-05 Score=74.25 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=85.2
Q ss_pred hhcccccCCCCCc--hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCc
Q 014905 269 WTPALSPNDEEIP--HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGI 346 (416)
Q Consensus 269 ~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (416)
++--++++..+.+ .|...+..-.+.++.-+...|+.+| .+..+.+.++......-+.......
T Consensus 393 FLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k--iGHv~v~~lgLa~~~~Rf~~~S~L~------------- 457 (618)
T KOG3762|consen 393 FLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK--IGHVNVMYLGLACNVGRFLYYSYLQ------------- 457 (618)
T ss_pred HHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHH--hcccceeeehhhHHHHHHHHHHHhc-------------
Confidence 4444555544443 6666666677888888899999999 8888888887777776665554444
Q ss_pred ccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeec
Q 014905 347 SLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 393 (416)
Q Consensus 347 ~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~ 393 (416)
|.|..+..-++-++..+..+..+.++++...|++.|+++.++.+.
T Consensus 458 --n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g 502 (618)
T KOG3762|consen 458 --NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQG 502 (618)
T ss_pred --CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHH
Confidence 678889999999999999999999999999999999999887653
No 234
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.26 E-value=7e-06 Score=57.15 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=66.8
Q ss_pred HHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHH
Q 014905 50 MAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKIL 127 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l 127 (416)
.++...+.|.+ |.. +|.++|.++.|++.+..+++++++++...++.++..+++.+..+.+...+..+ +.+.++++..
T Consensus 5 GigRFayTplL-P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 5 GIGRFAYTPLL-PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhHHHHHHhHh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 45566778888 666 89999999999999999999999999999999998888999999888888888 8888777654
No 235
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.22 E-value=0.00049 Score=61.64 Aligned_cols=344 Identities=13% Similarity=0.040 Sum_probs=150.8
Q ss_pred hhhHHHHHHHH---HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhh-----hhCchHHHHH
Q 014905 37 SFMNSYIIVYS---LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLAD-----KQGRKRACVT 107 (416)
Q Consensus 37 ~~~~~~~~~~~---~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~D-----r~Grr~~l~~ 107 (416)
+-++.++.+.+ +-++-.++.. .+ |+. +.-|.|.++.+...-++ -. .-.-+.+.++.| |+||||..++
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~i-P~lL~ak~vSyt~~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AI-PLLLQAKGVSYTSQAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hh-HHHhcCCCcchhhhhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccceee
Confidence 33444444433 3344445555 44 666 77888888777543332 22 223567888999 9999997654
Q ss_pred ------HHHHHHhhhh--hccc-----hhHHHHHHHHHHHHhhhhhhhhhhhhhhhh--hhcccCcchhhHHHHHHHHHH
Q 014905 108 ------YCITYMLSCV--TKHS-----SEYKILMLGRIFGGIATSLLFSAFESWLVA--EHNKRGFDQQWLSETFSKAIF 172 (416)
Q Consensus 108 ------~~~~~~~~~l--~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~--e~~~r~~~~~~~~~~~~~~~~ 172 (416)
+..+..++.. .... ++...+...-++.-+..+....+...|-+. +.++-|.+. +..++|..
T Consensus 104 p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaS----T~q~Vg~~ 179 (510)
T KOG3574|consen 104 PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAS----TCQSVGQT 179 (510)
T ss_pred ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchh----HHHHHHHh
Confidence 3333333322 1111 233333223344444445555555554444 335666663 45555555
Q ss_pred HHhhHHHHHHHHH-HHHHHhhhccCch---------hHHHHHHHHHHHHHHHHHHhcccCCCCccchhhHHHh---hhHH
Q 014905 173 LGNGLVAIISGLF-GNLLVDTLALGPV---------APFDAAACFLAFGMVIILASWTENYGDPEKKNLLAQF---KGAA 239 (416)
Q Consensus 173 ~G~~~~~~~~~~l-~~~~~~~~~~~w~---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 239 (416)
.|..++..+--.+ ..-..+.+-.+|. .-.+..+....+...++.+..+|++.+.+++ .+... .+-+
T Consensus 180 ~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e-~~~~i~~~yk~l 258 (510)
T KOG3574|consen 180 AGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE-LELGIHESYKLL 258 (510)
T ss_pred hhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh-hhcCHHHHHHHH
Confidence 5552222221111 1111111101222 1223344444455555544555544332111 12222 2344
Q ss_pred HhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchh---
Q 014905 240 LAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVES--- 313 (416)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~--- 313 (416)
+++++-|....+.......-.++.. .....+.-+.| .+.+ .+++........++.....|+...+ +++
T Consensus 259 ~~vLklk~v~~la~i~lt~K~gf~a-~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~----~~pl~~ 332 (510)
T KOG3574|consen 259 RDVLKLKSVRWLAGILLTGKLGFQA-ADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG----PRPLNV 332 (510)
T ss_pred HHHHcCccHHHHHHHHHHHHHHhhh-hhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC----CCcchH
Confidence 5566666666665444444333333 22133333332 2333 2222222233333344444443332 111
Q ss_pred ---HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHH-HHHHHHHhhhcchhHHHHHHhccCCccccceeee
Q 014905 314 ---YMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLI-GFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 389 (416)
Q Consensus 314 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g 389 (416)
.+..=......-..+....+...++ ++.+........+ ...+.+...-..+....+..+++.|+...|+.|.
T Consensus 333 ~lka~~~R~~~~~~~t~Lv~~~~~~~~~----~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymT 408 (510)
T KOG3574|consen 333 FLKAVPYRLGGGLVQTALVWWTPTLGHS----DGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMT 408 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcccccC----CCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHH
Confidence 1111111111111112222211111 2222111111111 1233333334455666778889999999999999
Q ss_pred eeecccceee
Q 014905 390 FFRIPLNVFV 399 (416)
Q Consensus 390 ~~~~~~~~~~ 399 (416)
+.|...|+..
T Consensus 409 lLNTLsnLGg 418 (510)
T KOG3574|consen 409 LLNTLSNLGG 418 (510)
T ss_pred HHHHHHHhcC
Confidence 9998888764
No 236
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.19 E-value=1.3e-05 Score=74.72 Aligned_cols=161 Identities=16% Similarity=0.131 Sum_probs=117.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~ 125 (416)
+.+++..+...++ -.+ |+.+..+...|........+-++.-++.+++..|+|+-+++..++....+=.+ ....+|.|
T Consensus 382 ~mG~g~~lv~tFL-fWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W 460 (618)
T KOG3762|consen 382 VMGAGVGLVFTFL-FWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPW 460 (618)
T ss_pred HHHHHHHHHHHHH-HHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCch
Confidence 5556666666666 223 89998888888777777788888888999999999999999999999888877 77889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHH
Q 014905 126 ILMLGRIFGGIATSLLFSAFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAA 205 (416)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~ 205 (416)
+.+-..+++|+..+..+.+..+ |++....++...+........-..+|- .+|.++|+...+.+ +-|..|...+
T Consensus 461 ~vLPieilqgit~aliWaa~~s-Y~s~vaPp~l~at~Q~l~~g~f~GlG~----g~GslIGG~~v~~f--g~~ttf~~~g 533 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIIS-YASHVAPPGLRATAQGLLQGIFHGLGK----GLGSLIGGFVVERF--GARTTFRIFG 533 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHH-HHHhhCCCcchHHHHHHHHHHhcccCc----chhhhhhhhhheee--hhHHHHHHHH
Confidence 9999999999999999999988 888663333222212122222222333 44556777777776 7788888877
Q ss_pred HHHHHHHHHHH
Q 014905 206 CFLAFGMVIIL 216 (416)
Q Consensus 206 ~~~~~~~~~~~ 216 (416)
+.+++.+++..
T Consensus 534 iAcl~~l~~~~ 544 (618)
T KOG3762|consen 534 IACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHH
Confidence 76666555443
No 237
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.15 E-value=6.9e-06 Score=79.18 Aligned_cols=141 Identities=12% Similarity=0.088 Sum_probs=96.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHH
Q 014905 246 ERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIIS 322 (416)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 322 (416)
|.++.+......-..++|.... +.+.|.+++.+.+ .+.+...+.....+..++.|+++||. +|+||.+..+..+.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~-~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~-~G~r~~~~~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQG-ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHL-LGTKRTIVLGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhc-cchHHHHHHHHHHH
Confidence 4444444455555677777555 7788887766654 44555555556666677899999985 67777777777776
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCcc--ccceeeeeeecccceeee
Q 014905 323 SASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~--~rg~~~g~~~~~~~~~~~ 400 (416)
.+.......... .....++...+.+++.|...|...+++.|.+|++ +|++++++.....|+...
T Consensus 92 ~~g~~~~~~~~~--------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~ 157 (489)
T PRK10207 92 AIGYFMTGMSLL--------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL 157 (489)
T ss_pred HHHHHHHHHhcc--------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH
Confidence 655544433221 1222345666778888888899999999999887 457889988888888766
Q ss_pred ee
Q 014905 401 IV 402 (416)
Q Consensus 401 ~~ 402 (416)
++
T Consensus 158 ~g 159 (489)
T PRK10207 158 IS 159 (489)
T ss_pred HH
Confidence 54
No 238
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=0.00013 Score=69.37 Aligned_cols=156 Identities=18% Similarity=0.175 Sum_probs=90.4
Q ss_pred HHHHHhHHHHHHHHH--HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCch--------HH-HHHHHHHHHhhhh-
Q 014905 50 MAGDWLQGPYVYYLY--STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRK--------RA-CVTYCITYMLSCV- 117 (416)
Q Consensus 50 ~~~~~~~~~~l~~l~--~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr--------~~-l~~~~~~~~~~~l- 117 (416)
..+..+...++ |.| +-+|++..+.|++.++..+...+..+.+|.++||.-+| |. -.++....++..+
T Consensus 271 ~~~~~~l~~y~-PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~ 349 (466)
T KOG2532|consen 271 NWGFYLLLTYL-PTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLV 349 (466)
T ss_pred HHHHHHHHHHh-hHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHe
Confidence 34445566677 666 68999999999999999999999999999999988652 22 2233444444455
Q ss_pred hccchh-HH-HHHH----HHHHHHhhhhhhhhhhhhhhhhhhc-ccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 014905 118 TKHSSE-YK-ILML----GRIFGGIATSLLFSAFESWLVAEHN-KRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLV 190 (416)
Q Consensus 118 ~~~~~~-~~-~l~~----~r~l~G~~~~~~~~~~~~~~i~e~~-~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~ 190 (416)
..+.++ .. ..++ +-.+.|+..++... ...+ .+..+. ...++.... ..+...++|.+.+.+.
T Consensus 350 l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~-------~~~~~apq~a~----~l~g~~~~~-~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 350 LAFTSDEHRLLAVILLTIAIGLSGFNISGFYK-------NHQDIAPQHAG----FVMGIINFV-GALAGFIAPLLVGIIV 417 (466)
T ss_pred eeecCCCcchHHHHHHHHHHHHcccchhhhHh-------hhhhccchHHH----HHHHHHHHH-HHHHHHHHHHheeeEe
Confidence 444442 11 1111 12222222222211 1111 222221 222222222 3344477777777666
Q ss_pred h-hhccCchhHHHHHHHHHHHHHHHHHHh
Q 014905 191 D-TLALGPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 191 ~-~~~~~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
+ .....|+..|.+.+++.++..+....+
T Consensus 418 ~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 418 TDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 2 111279999999999888887655544
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.06 E-value=0.00026 Score=56.25 Aligned_cols=97 Identities=16% Similarity=0.228 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh---c
Q 014905 78 FIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCVTKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH---N 154 (416)
Q Consensus 78 ~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~---~ 154 (416)
.++.+....+..++.+.+.+++|.|+.++++.+.+.+-....+.++.+.++.+-.+.|++.+..+++... ++.+. +
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~-ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGT-YLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhH-HHHHcCCHH
Confidence 3455566677778888999999999999999998887666446778899999999999999999998888 88855 4
Q ss_pred ccCcchhhHHHHHHHHHHHHh
Q 014905 155 KRGFDQQWLSETFSKAIFLGN 175 (416)
Q Consensus 155 ~r~~~~~~~~~~~~~~~~~G~ 175 (416)
+|++..++.-.....+...|+
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~ 142 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGN 142 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHH
Confidence 555554444444444444443
No 240
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.06 E-value=1.6e-05 Score=77.11 Aligned_cols=145 Identities=10% Similarity=0.086 Sum_probs=92.4
Q ss_pred hhcchh-HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHH
Q 014905 242 IASDER-IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQI 317 (416)
Q Consensus 242 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~ 317 (416)
.+|+|+ ++.......+...+.|.... +.+.|.+++.+.+ .+..............++.|++.||. .+.|+.+..
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~-~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~-~G~r~~~~~ 93 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQG-IMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKV-LGTKRVIML 93 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchHHHHHH
Confidence 345554 55555555555666666555 8899988776664 33444444433344456889999993 377777777
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccc--cceeeeeeeccc
Q 014905 318 VFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFFRIPL 395 (416)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~--rg~~~g~~~~~~ 395 (416)
+..+..+.......... +.+...+...+.+++.|...+...+++.|.+|+++ |.+++++.+...
T Consensus 94 g~~~~~ig~~l~~~~~~--------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~ 159 (500)
T PRK09584 94 GAIVLAIGYALVAWSGH--------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSI 159 (500)
T ss_pred HHHHHHHHHHHHHHhcc--------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence 76666655443333221 22334455667788888888888899999998654 456777777777
Q ss_pred ceeeeee
Q 014905 396 NVFVCIV 402 (416)
Q Consensus 396 ~~~~~~~ 402 (416)
|++..++
T Consensus 160 ~iG~~~g 166 (500)
T PRK09584 160 NIGSFFS 166 (500)
T ss_pred HHHHHHH
Confidence 7766554
No 241
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.94 E-value=4.2e-06 Score=65.70 Aligned_cols=97 Identities=10% Similarity=0.086 Sum_probs=72.9
Q ss_pred HHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcc
Q 014905 288 TFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIF 367 (416)
Q Consensus 288 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 367 (416)
...++..++.+..+++.|| .++|+.+.................. +.+.......+.+++.+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~--~g~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~~~~ 68 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDR--FGRKPVLLVGLFIFVLSTAMFALSS---------------NITVLIIARFLQGFGAAFA 68 (141)
T ss_pred eehhHHHHHHhhHHHHHhh--cchhHHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHHHHHHHHHHHH
Confidence 3467788899999999999 7777776666555554443332222 4566677778888888888
Q ss_pred hhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 368 WPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 368 ~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
.+....+..|.+|+++|+++.++.+...++...+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 102 (141)
T TIGR00880 69 LVAGAALIADIYPPEERGVALGLMSAGIALGPLL 102 (141)
T ss_pred HHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHH
Confidence 8999999999999999999999988776665544
No 242
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.94 E-value=0.0038 Score=59.63 Aligned_cols=137 Identities=12% Similarity=0.011 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHhhHhhhhhhhCc-hHHHHHHHHHHHhhhh-hccchh---------------------HHHHHHHHHHH
Q 014905 78 FIAGFGSSMLFGTLVGSLADKQGR-KRACVTYCITYMLSCV-TKHSSE---------------------YKILMLGRIFG 134 (416)
Q Consensus 78 ~~~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~l-~~~~~~---------------------~~~l~~~r~l~ 134 (416)
...+.+...+.++..-++.+|+|+ |+...++.++.+++.. ..+.++ .+..++.-.+.
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 334455556777788889999994 6777888777776666 333222 26677777888
Q ss_pred Hhhhhhhhhhhhhhhhhhh-c----ccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHH
Q 014905 135 GIATSLLFSAFESWLVAEH-N----KRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLA 209 (416)
Q Consensus 135 G~~~~~~~~~~~~~~i~e~-~----~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~ 209 (416)
|+..+..+..-.+ ++++. + +.|...+++|....+.+.+.+ + ..+.+.+.++.+-...+.+.++..+
T Consensus 391 Gi~~A~~~siPfa-l~s~~~~~~~~~~G~~mgilN~~I~lpQii~s----l----~~g~~~~~~g~~~~~~~~~~gv~~~ 461 (477)
T TIGR01301 391 GIPLAITYSIPFA-LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVS----L----GSGPWDQLFGGGNLPAFVVGAVAAF 461 (477)
T ss_pred hHHHHHHHHHhHH-HHHHHccccCCCCcchhhHHHHHHHHHHHHHH----H----HHHHHHHHcCCCCeeHHHHHHHHHH
Confidence 9988888777677 88755 2 336666666555555554433 2 2233333333356778888999999
Q ss_pred HHHHHHHHhcccCC
Q 014905 210 FGMVIILASWTENY 223 (416)
Q Consensus 210 ~~~~~~~~~~~~~~ 223 (416)
++.++..+..|+.+
T Consensus 462 ~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 462 VSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHhCCCCC
Confidence 99988887777655
No 243
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=5.8e-05 Score=67.22 Aligned_cols=126 Identities=14% Similarity=0.092 Sum_probs=79.0
Q ss_pred HHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccch--hH--HHHHHHHHHHHhhhhhhhhhhhhhhhhhh--
Q 014905 81 GFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSS--EY--KILMLGRIFGGIATSLLFSAFESWLVAEH-- 153 (416)
Q Consensus 81 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~--~~--~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-- 153 (416)
..+.-.-|.++.+++.||+|||++|..+.+.+++..+ ..... |. .+++.+|++...+. .+... |..|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f----qvaYv-YtPEVyP 464 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF----QVAYV-YTPEVYP 464 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh----eEEEE-ecCcccc
Confidence 3455667888999999999999999999888888776 44433 22 44555666554433 33344 66766
Q ss_pred -cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcccCC
Q 014905 154 -NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWTENY 223 (416)
Q Consensus 154 -~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 223 (416)
.-|+.. ++...+++. +|. ++.|+++ ...+. +-..+..+.+.+.+++.+...++.-|++
T Consensus 465 TavRatg---vGtcSsmaR-Igg----I~~p~iA-~~~e~---s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 465 TAVRATG---VGTCSSMAR-IGG----IFSPVIA-MRAEL---STSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhhhcc---hhhhhhHHh-hhh----hhhhHHH-HHhcc---ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 556665 323333322 334 7777777 33332 4456677777777777777764443433
No 244
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.83 E-value=1.6e-05 Score=72.84 Aligned_cols=107 Identities=13% Similarity=0.169 Sum_probs=89.7
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHH
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTF 360 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (416)
..|++...+.+..++.+++.|.++|| .++++.+.++..+..++.+...+.. +.|...++=.+.
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~~Av~~~~fs~---------------~Fwq~~l~R~~v 131 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWTLAVFASGFSN---------------HFWQVLLCRGFV 131 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHh
Confidence 37899999999999999999999999 6777777777776665555554443 567777777888
Q ss_pred HHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeeeee
Q 014905 361 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVLY 404 (416)
Q Consensus 361 ~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~~~ 404 (416)
|++.+...|..++++++.+|+++|++++++++...++...+|-.
T Consensus 132 GiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~v 175 (493)
T KOG1330|consen 132 GIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYV 175 (493)
T ss_pred ccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEE
Confidence 89999999999999999999999999999999999988777665
No 245
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.82 E-value=0.0013 Score=58.25 Aligned_cols=305 Identities=13% Similarity=0.052 Sum_probs=161.1
Q ss_pred HcCCChhhHH-HHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhh
Q 014905 66 TYGFGKGEIG-QLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFS 143 (416)
Q Consensus 66 ~~~~s~~~~g-~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (416)
+.+++..|+. -+.-...-..++.-.+.=.+.|-.-.|++++.-.+....... ..+.++.+.+=+.-+..|...+....
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIA 114 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIA 114 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHh
Confidence 5566665552 222222223334444555689999999988887666666555 67788888888888888887765433
Q ss_pred hhhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcc
Q 014905 144 AFESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWT 220 (416)
Q Consensus 144 ~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 220 (416)
..+ ++-+. +++.+..+.- ..+...|- ..|..++..+......++...=.+......++..+.. +.|
T Consensus 115 -Yys-YIYs~Vd~~~Yqrvt~y~----RaA~L~g~----~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~-fLP 183 (433)
T KOG3810|consen 115 -YYS-YIYSKVDPEMYKRVTGYC----RAAFLVGK----FVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLAL-FLP 183 (433)
T ss_pred -hhh-eeeeecCHHHHHHHHHHh----HHHHHHHh----HHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHh-hCC
Confidence 233 33322 3334432222 22233334 3333444444333212444433444444444444444 333
Q ss_pred cCCCC------ccc------hh--hHH-----------HhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 014905 221 ENYGD------PEK------KN--LLA-----------QFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSP 275 (416)
Q Consensus 221 ~~~~~------~~~------~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (416)
..+++ +++ ++ .++ .....+.+..+||+++.-.+-..+...+.+.... |....-.
T Consensus 184 ~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~n-Y~Q~LW~ 262 (433)
T KOG3810|consen 184 RVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTN-YTQILWK 262 (433)
T ss_pred CCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHH-HHHHHHH
Confidence 22211 000 00 000 0112344445677666555555544444444222 3333333
Q ss_pred CCC----CCchHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchh
Q 014905 276 NDE----EIPHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGS 351 (416)
Q Consensus 276 ~~~----~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (416)
+.. +.-.|..-+...+.+.++.+..|.+.-+. .+.+..++.........+.+...... +.|
T Consensus 263 ~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~t~--------------~Iw 327 (433)
T KOG3810|consen 263 EVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQTQ--------------HIW 327 (433)
T ss_pred hhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhccc--------------cee
Confidence 221 11245555666666677777778776542 22223333333222223222222222 679
Q ss_pred HHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccce
Q 014905 352 LQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 352 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
...+..+++...+....++....+++...+|.-|-.+|+..+..-+
T Consensus 328 ~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~ 373 (433)
T KOG3810|consen 328 VCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALI 373 (433)
T ss_pred hhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHH
Confidence 9999999999999998888888888999999999999987654433
No 246
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.78 E-value=0.00026 Score=67.57 Aligned_cols=63 Identities=16% Similarity=0.229 Sum_probs=47.2
Q ss_pred HhHHHHHHHHH-HH-cCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh----hCchHHHHHHHHHH-Hhhhh
Q 014905 54 WLQGPYVYYLY-ST-YGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK----QGRKRACVTYCITY-MLSCV 117 (416)
Q Consensus 54 ~~~~~~l~~l~-~~-~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr----~Grr~~l~~~~~~~-~~~~l 117 (416)
....-++ |++ ++ .|+|..+.+.+...+.++.+++.+.+|.++|| ..+|........+. .++..
T Consensus 290 ~~~~~~l-pl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~ 359 (495)
T KOG2533|consen 290 YGFSYWL-PLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAI 359 (495)
T ss_pred ccHHHHH-HHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3344455 777 55 67999999999999999999999999999999 66666666654443 33434
No 247
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.67 E-value=9.6e-05 Score=69.13 Aligned_cols=102 Identities=10% Similarity=-0.012 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.|.++..+..+..+..+..+++.|| .+.|+.+........+...+..+.. +.....+.-+++|
T Consensus 64 ~G~I~s~F~ysYal~qIp~GlLaDr--lG~K~vL~l~~l~Wsl~t~L~~fa~---------------Sl~~L~i~R~llG 126 (511)
T TIGR00806 64 TNEIIPVLPYSHLAVLVPVFLLTDY--LRYKPVLVLQALSFVCVWLLLLLGT---------------SVWHMQLMEVFYS 126 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHH
Confidence 7889999999999999999999999 9999988888877776666665543 4566777888889
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
++.+... ....++.+.+|+++|+++.|+.+...+++..+
T Consensus 127 vaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I 165 (511)
T TIGR00806 127 VTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL 165 (511)
T ss_pred HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888 88999999999999999999998877776544
No 248
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.58 E-value=0.00024 Score=66.24 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=99.3
Q ss_pred hhcc-hhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC----Cc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchh
Q 014905 242 IASD-ERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE----IP---HGFIFATFMLASMLGSSFASRLLAHSSLRVES 313 (416)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~ 313 (416)
.+++ |.++.+...-..=.+++|.... .+..|+.++.+ .+ +.-++..+..-.-....++|+++||. .|.||
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmra-iL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~-LG~~~ 93 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRA-ILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRV-LGTRR 93 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHH-HHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh-cchhH
Confidence 4455 4455554444444577776444 44445544332 43 33334444444455678899999998 89999
Q ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccc--cceeeee
Q 014905 314 YMQIVFIISSASLLIPILTN-FLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNF 390 (416)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~--rg~~~g~ 390 (416)
.+.++..+..+.-.++.... . +....++.+.+..++.|..-|...+++.|.+|+++ |-.++++
T Consensus 94 tI~lGail~~iGh~~L~~~~~~--------------~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~ 159 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSVS--------------GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTL 159 (498)
T ss_pred HHHHHHHHHHHHHHHHhccccc--------------cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccE
Confidence 99988888876666554442 1 23557778888889999999999999999998754 6778888
Q ss_pred eecccceeeeeeee
Q 014905 391 FRIPLNVFVCIVLY 404 (416)
Q Consensus 391 ~~~~~~~~~~~~~~ 404 (416)
+.+..|+.+....+
T Consensus 160 fY~~iNiGsl~~p~ 173 (498)
T COG3104 160 FYMGINIGSLIAPI 173 (498)
T ss_pred EEEEeehHHHHHHH
Confidence 88888887666544
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.42 E-value=0.0022 Score=59.80 Aligned_cols=106 Identities=15% Similarity=0.249 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhhhh-hccch---------hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-cc--cCcchhhHHHHHHH
Q 014905 103 RACVTYCITYMLSCV-TKHSS---------EYKILMLGRIFGGIATSLLFSAFESWLVAEH-NK--RGFDQQWLSETFSK 169 (416)
Q Consensus 103 ~~l~~~~~~~~~~~l-~~~~~---------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~~--r~~~~~~~~~~~~~ 169 (416)
|++.++.++..+|.+ ...+. +.+.++++..+.++|.|..-+...+ +..|. ++ +.+..+.. ..+..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~-~~~dq~~~~~~~~~~~~F-~~fY~ 79 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISP-FGADQYDEDDDSRRDSFF-NWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHH-HHHHCSSTTTTTHHHHHH-HHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHH-HHHHHhcccchhhhhhhH-HHHHH
Confidence 455666666666555 22221 2367888899999999999999888 88866 22 23333333 45555
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 014905 170 AIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 170 ~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 216 (416)
+..+|. .++....+++.+.. +|.+.|.+.++..+++.+...
T Consensus 80 ~in~G~----~~~~~~~~~i~~~~--~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 80 GINIGS----LFSPTLVPYIQQNY--GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHH----HHHHHCCCHHHHCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhh----Hhhcccchhhcccc--chhhhhhHHHHHHHHHHHHHH
Confidence 556666 77777777777776 999999999988888777655
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.36 E-value=0.0012 Score=59.35 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.|++-+.+++...+.++..|.++|| .|+|..+.++.....+ ..+...... .+.++.+.-
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~--yGRkpvll~c~~~va~-s~ll~~~S~------------------~F~afv~aR 128 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDR--YGRKPVLLACLIGVAL-SYLLWALSR------------------NFAAFVLAR 128 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhh--hCchHHHHHHHHHHHH-HHHHHHHHH------------------HHHHHHHHH
Confidence 7888899999999999999999999 5555555554444443 333333332 223333333
Q ss_pred Hhhhc---chhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 362 ACVGI---FWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 362 ~~~g~---~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+..|+ ...+..++++|.+++|+|+.+++..++...+.-++|
T Consensus 129 ~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilG 172 (451)
T KOG2615|consen 129 FLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILG 172 (451)
T ss_pred HhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhc
Confidence 44444 446678999999999999999999988888765553
No 251
>PTZ00207 hypothetical protein; Provisional
Probab=97.27 E-value=0.00082 Score=65.62 Aligned_cols=127 Identities=13% Similarity=-0.022 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhcc
Q 014905 259 EGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFL 335 (416)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (416)
....|.+.. +.|.+ +++.+.+ .+.+.+.. .......+..|++.|| +++|+.+.++.....+...........
T Consensus 40 ~g~~y~fsv-~s~~L-~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr--~G~R~vllig~ll~~iG~ll~ala~~~ 114 (591)
T PTZ00207 40 TSFMYAFNL-ISGAM-QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDY--LGPRPIFVLSMTVFCLGTLLFALTFQE 114 (591)
T ss_pred HHHHHHHHH-HHHHH-HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHH--hCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344445343 55544 3344554 34444332 2222345578999999 899988888887777666655543210
Q ss_pred CCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 336 ETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
....+.+...+...+.|++.+..++.....+.+.+| ++||++.|+.....++...
T Consensus 115 ---------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 115 ---------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred ---------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHH
Confidence 000045666667777788877777777778888887 6789999998877776654
No 252
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.22 E-value=0.22 Score=47.86 Aligned_cols=82 Identities=9% Similarity=0.099 Sum_probs=52.0
Q ss_pred HhhhHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCC---CCc--hHHHHHHHHHHHHHhhHHHHHHhhccc
Q 014905 234 QFKGAALAIASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDE---EIP--HGFIFATFMLASMLGSSFASRLLAHSS 308 (416)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~g~~~~~~~~~~~~~~~~~~~l~~r~~ 308 (416)
...++++.++|+|.+..+.....+++.+.......|-....+... +.+ .|-.....++..++..++.+++.||
T Consensus 268 s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~-- 345 (491)
T PF03219_consen 268 SLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR-- 345 (491)
T ss_pred cHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 345678888899998888777777766666655545433332211 111 4555555677777777888899998
Q ss_pred ccchhHHHH
Q 014905 309 LRVESYMQI 317 (416)
Q Consensus 309 ~~~~~~~~~ 317 (416)
.|.+....+
T Consensus 346 ~GW~~~Ali 354 (491)
T PF03219_consen 346 FGWRTAALI 354 (491)
T ss_pred hhHHHHHHH
Confidence 665554443
No 253
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.11 E-value=0.12 Score=45.94 Aligned_cols=98 Identities=17% Similarity=0.142 Sum_probs=70.9
Q ss_pred HHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-----ccc
Q 014905 82 FGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCVTKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAEH-----NKR 156 (416)
Q Consensus 82 ~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-----~~r 156 (416)
.+.-...+.+.+.+..++|-|+++.++...+......-+-+.+..++-+....|++.+..+..--+ ++++. +.|
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~Skgt-YlT~~g~~ya~~~ 146 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGT-YLTPMGQNYANQR 146 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcc-eecHHHHHHHHhh
Confidence 344445566666899999999999998887777665445678888999999999999988887777 77744 344
Q ss_pred ---------CcchhhHHHHHHHHHHHHhhHHHH
Q 014905 157 ---------GFDQQWLSETFSKAIFLGNGLVAI 180 (416)
Q Consensus 157 ---------~~~~~~~~~~~~~~~~~G~~~~~~ 180 (416)
.+..+.....+..++..|+.+...
T Consensus 147 ~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issl 179 (390)
T KOG3097|consen 147 GEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSL 179 (390)
T ss_pred hhhccCceeeeehhHHHHHHHHHHHHHHHHHHH
Confidence 344455557777777777744433
No 254
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.04 E-value=0.11 Score=50.93 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhhhhhCchH-HHHHHHHHHHh--hhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014905 73 EIGQLFIAGFGSSMLFGTLVGSLADKQGRKR-ACVTYCITYML--SCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESW 148 (416)
Q Consensus 73 ~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~-~l~~~~~~~~~--~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (416)
+.++......++..+++.+.|.+..+++|-| .++++...+.+ +.. ..-.+|....+..-++.|++.|........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~- 428 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIV- 428 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHH-
Confidence 5678888888888899999999999888655 44556544443 333 333345555566677888888776554333
Q ss_pred hhh---hhcccCcchhhHHHHHHHHHHHHhhHH
Q 014905 149 LVA---EHNKRGFDQQWLSETFSKAIFLGNGLV 178 (416)
Q Consensus 149 ~i~---e~~~r~~~~~~~~~~~~~~~~~G~~~~ 178 (416)
... +.++-+.+.++......+|..+|.++.
T Consensus 429 ~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 429 IAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred eeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 222 335566666666666666666666544
No 255
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.03 E-value=0.072 Score=50.57 Aligned_cols=50 Identities=16% Similarity=0.064 Sum_probs=38.7
Q ss_pred chhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 349 SGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 349 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
+.+..++...++++..|........+..+.+++++|-.+-.+..+..+.+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~G 420 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVG 420 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45667778899999999988888888999999988877666655444443
No 256
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.95 E-value=0.00083 Score=65.55 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEA 362 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 362 (416)
+++.+...++..++.++.++++|+ .|+|+.+.++.....+..++..... +.+...++=++.|+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~--~GRk~~l~~~~~~~~iG~ii~~~a~---------------~~~~l~~GR~l~G~ 154 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDR--IGRKKTLLLAVVLFLIGAIIIALAP---------------SWYQLIVGRILTGL 154 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhh---------------hHHHHHHHHHHhcc
Confidence 788888899999999999999999 8888888888777776666655554 56778888899999
Q ss_pred hhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 363 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 363 ~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+.|........+.+|..|++.||...+..+...++...++
T Consensus 155 g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988877666544433
No 257
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.90 E-value=0.023 Score=52.82 Aligned_cols=107 Identities=12% Similarity=0.000 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.+.+.....++.++|++..|+++|| +++|+......++..++.. ....+...+++ .. -.++....=.+.|
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~--~GRK~vYG~~liImIi~t~-~~~~s~~~~~~---~~----~m~~L~~~R~~LG 155 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDK--FGRKKVYGKELIIMIICSA-LSGLSVGTTSP---LG----VMMTLCFFRFLLG 155 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hcchhhhhHHHHHHHHHHH-HhccCCCCCCC---cc----hhhHHHHHHHHhh
Confidence 6777778899999999999999999 7777766655555544443 22222221111 01 1122222335667
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
++.|.-+|...+..+|...++.||+-.+..-...+..
T Consensus 156 iGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~G 192 (538)
T KOG0252|consen 156 IGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFG 192 (538)
T ss_pred ccccCCCcchHHHhhhhhhhccccceeEEEEEecchh
Confidence 8888899999999999999999999887765555443
No 258
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.89 E-value=0.00059 Score=68.03 Aligned_cols=120 Identities=13% Similarity=0.081 Sum_probs=81.3
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccC----CC------------------
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLE----TP------------------ 338 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------------ 338 (416)
+.|.+.+...++..++.++.+++.|| .+++|.+.++..+.++..++........ ..
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r--~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~ 146 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTK--LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCM 146 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcc--cCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccccccc
Confidence 37888899999999999999999999 7777777776666655544433321000 00
Q ss_pred -C------------CCCCCCc-ccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 339 -P------------DVRGGGI-SLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 339 -~------------~~~~~~~-~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
. +++...- +......++.-++.|++.+..++...+++.|.+|+++|++..|+......+...++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG 224 (633)
T TIGR00805 147 ENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFG 224 (633)
T ss_pred CCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHH
Confidence 0 0000000 00233455677888888888999999999999999999999998877665544433
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.76 E-value=0.029 Score=51.94 Aligned_cols=88 Identities=15% Similarity=0.048 Sum_probs=57.2
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCc-hHHHHHHHHHHHhhhh----hcc-chhHHHHHHHHHHHHhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGR-KRACVTYCITYMLSCV----TKH-SSEYKILMLGRIFGGIAT 138 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~l----~~~-~~~~~~l~~~r~l~G~~~ 138 (416)
..-|++....|++.....++.++++...|.++||... |+++.+......++.+ +.. ..+.+.++..-.+.|.+.
T Consensus 294 ~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 294 CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh
Confidence 3557777788999999999999999999999999884 4444444333333311 111 123355555566677776
Q ss_pred hhhhhhhhhhhhhhh
Q 014905 139 SLLFSAFESWLVAEH 153 (416)
Q Consensus 139 ~~~~~~~~~~~i~e~ 153 (416)
....|...- +-.|.
T Consensus 374 ~~~~Pig~E-lgvE~ 387 (480)
T KOG2563|consen 374 TGYLPIGFE-LGVET 387 (480)
T ss_pred cCCCCccee-eeeee
Confidence 667775555 54444
No 260
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.52 E-value=0.041 Score=47.23 Aligned_cols=61 Identities=11% Similarity=-0.020 Sum_probs=36.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccC--CCCccch---hhHHHhhhHHHhhhcchhHHHHHHHHH
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTEN--YGDPEKK---NLLAQFKGAALAIASDERIALLGAIQS 256 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (416)
+|+..+.+.+++.++.+++...+-+|- ..+++++ +...+.+.+..+.+|+|..+...+...
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg 104 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTLSKKPSYKSILKEKETWKWILIYG 104 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccccccchHHHHHccchHHHHHHHHH
Confidence 799999888888777766665443321 1111111 111223467888899988777654444
No 261
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.49 E-value=0.089 Score=47.53 Aligned_cols=75 Identities=21% Similarity=0.225 Sum_probs=51.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhHHHHHHHHH-HHcCCC-hhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHH
Q 014905 35 FNSFMNSYIIVYSLMMAGDWLQGPYVYYLY-STYGFG-KGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCI 110 (416)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~s-~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~ 110 (416)
.++....+...+++...+|-+..--. .++ .+++-+ -.....-..+-....++..++.|...|+..|+|++...+.
T Consensus 25 ls~~~i~Ly~gy~lt~wgdR~W~F~V-sL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 25 LSSTVIFLYLGYFLTTWGDRMWEFSV-SLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred ccceeehhhHHHHHhHhhHhHHHHHH-HHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 34444456666778888888776555 667 555543 3334444445556678889999999999999999887633
No 262
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.45 E-value=0.00024 Score=68.17 Aligned_cols=107 Identities=11% Similarity=0.137 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.+...+...++..+|+++.+.+.|| .|+|+.+.....+..+...+..+.... . +.+...+.-.+.|
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~--~GRk~~~~~~~~~~~i~~~~~~~~~~~---------~---~~~~~~~~R~~~G 113 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADR--YGRKPALIISALLMIIGSILIAFAPSY---------N---NFWMLLIGRFLIG 113 (451)
T ss_pred HHHHHHHHHhhhccccccccccccc--ccccccccccccccccccccccccccc---------c---ccccccccccccc
Confidence 4677788899999999999999999 888877777666655554444433310 0 3455666778889
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
++.|...+....++.|..|++.|++..++.+....+...++
T Consensus 114 ~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~ 154 (451)
T PF00083_consen 114 FGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLA 154 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999887776654443
No 263
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.39 E-value=0.0083 Score=58.75 Aligned_cols=92 Identities=9% Similarity=0.011 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.....+.+.+|.++|.++.|.++|| +|+|+.++.+..+..+......+.. +.+...+.=++.|
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~--~GRk~~~~~~~~~~~i~~~~~a~a~---------------~~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDR--FGRKPVLLVSLLLFIIFGILTAFAP---------------NYWMFLIFRFLSG 182 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhh--cccHHHHHHHHHHHHHHHHHHHHhC---------------cHHHHHHHHHHHH
Confidence 6677788899999999999999999 7777777777766665554433333 6777888888889
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeee
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNF 390 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~ 390 (416)
++.+........+..|.+++++|+.+..+
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH
Confidence 99999999999999999999999998887
No 264
>PRK03612 spermidine synthase; Provisional
Probab=96.36 E-value=0.7 Score=45.05 Aligned_cols=38 Identities=8% Similarity=-0.141 Sum_probs=31.3
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCch
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRK 102 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr 102 (416)
.-+|-+..+.+.+.+++..+..+|+...|++.++--|+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~ 80 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG 80 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 46788889999999999999999999998887543333
No 265
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.25 E-value=0.085 Score=46.38 Aligned_cols=136 Identities=14% Similarity=0.071 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 014905 74 IGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLFSAFESWLVAE 152 (416)
Q Consensus 74 ~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e 152 (416)
.|.+.-+-.+..++..+.+....||+---.=..+..++.+.+.+ .+++++.++-+.+-.+..++.|.-....-+ +.+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~-lss~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLA-LSSR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhh-hhcc
Confidence 46666677788888888888899987533333445566777777 889999999988888888888766554333 3332
Q ss_pred hcccCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHhcc
Q 014905 153 HNKRGFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVDTLALGPVAPFDAAACFLAFGMVIILASWT 220 (416)
Q Consensus 153 ~~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 220 (416)
-+|....+|- .|... ++++|..--..+.+..+.+.|...++...+.++.+...++..+
T Consensus 143 -Y~~~~i~~WS-----SGTGg----AGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 143 -YPSIVIAGWS-----SGTGG----AGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred -CCCceecccc-----CCCCc----chhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 2233332333 22111 1122222111222212236777777777766665555554443
No 266
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.91 E-value=0.52 Score=45.09 Aligned_cols=107 Identities=15% Similarity=0.148 Sum_probs=82.6
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHh-hhhhhhCchHHHHHHHHHHHhhhh-hccchhHHHHHHHHHHHHhhhhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVG-SLADKQGRKRACVTYCITYMLSCV-TKHSSEYKILMLGRIFGGIATSLLF 142 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G-~l~Dr~Grr~~l~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (416)
..+++++.+.+...+.......+.+.+.. .+...+|-|+....++..-.+... .+++++.|+.+....+.++... ..
T Consensus 270 ~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~-~~ 348 (463)
T KOG2816|consen 270 AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGI-VF 348 (463)
T ss_pred eecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcc-hh
Confidence 47899999999888888888888888876 888889999988889888888888 8999999999988888776543 34
Q ss_pred hhhhhhhhh---hhcccCcchhhHHHHHHHHHHH
Q 014905 143 SAFESWLVA---EHNKRGFDQQWLSETFSKAIFL 173 (416)
Q Consensus 143 ~~~~~~~i~---e~~~r~~~~~~~~~~~~~~~~~ 173 (416)
+...+ ..+ +.+++|+..++.+...+....+
T Consensus 349 pa~~s-~~s~~v~~~e~g~v~~~is~i~~l~~~~ 381 (463)
T KOG2816|consen 349 PAIRA-FASILVSPEEQGKVFGIISGIEGLSGVV 381 (463)
T ss_pred HHHHh-HHHhhcccccccchhhHHHHHHHHhhhh
Confidence 44444 555 4488899866665554444433
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.86 E-value=0.88 Score=42.15 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=53.8
Q ss_pred HHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcch
Q 014905 289 FMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFW 368 (416)
Q Consensus 289 ~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 368 (416)
+.+...+|.....+...+ .+|.+.+....-... ++.+. ..+.+| .+..-.+.+.......++++..|-..
T Consensus 292 fN~~d~vG~~~a~~~~~~----~~r~l~i~v~lR~lf--iPlF~-~cn~~~---~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWP----DPRKLTIPVLLRLLF--IPLFL-LCNYPP---LPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHhhhhhhhcccCC----CCceehHHHHHHHHH--HHHHH-HhccCC---CCceecCchHHHHHHHHHHhccchHh
Confidence 577777786666665554 555554444443322 22222 111111 00000034667778888899999888
Q ss_pred hHHHHHHhccCCccccceeeeee
Q 014905 369 PSIMKMRSQYIPEEARSTIMNFF 391 (416)
Q Consensus 369 ~~~~~~~~~~~p~~~rg~~~g~~ 391 (416)
.....+..+.+|++++-.+-.+.
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m 384 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLM 384 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHH
Confidence 88888999988888775554443
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.83 E-value=1.8 Score=41.24 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=32.3
Q ss_pred HHhhhcchhHHHHHHhccCCccccceeeeeeecccceeee
Q 014905 361 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVC 400 (416)
Q Consensus 361 ~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~ 400 (416)
.+.....+....+.-+++.++..-|+.|-+.|...|+++.
T Consensus 416 sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 416 SFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 3444456677788888999999999999999999998754
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.26 E-value=0.2 Score=34.55 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=39.1
Q ss_pred hhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHH
Q 014905 269 WTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFII 321 (416)
Q Consensus 269 ~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~ 321 (416)
+.|.|.++ .+.+ .|.+.+...+..+++.++.+++.|| .+.+|........
T Consensus 22 fl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk--~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 22 FLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADK--FGKRKVILLGSLF 74 (77)
T ss_pred hhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCccHHHHHHHHH
Confidence 77888875 3443 8889899999999999999999999 6776666554443
No 270
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.13 E-value=0.18 Score=43.78 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=74.4
Q ss_pred HHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhc
Q 014905 258 FEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNF 334 (416)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (416)
..+..|.+.. |.|.+.+ ..+.+ ...+.....++..+ ++..|.+.|| .+++..+.++................
T Consensus 14 ~~Gt~Y~Fs~-yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~--~gp~~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 14 CSGTTYTFSA-YSPQLKS-RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDR--FGPWVVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred hcCcccchhh-hhHHHHH-HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455566444 6666554 45554 34444444666665 5888999999 88888788877777766665544442
Q ss_pred cCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeeccccee
Q 014905 335 LETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
.. .+. .+.|.......+.+.+....+........+.+|+ +||++.|+......+.
T Consensus 89 ~~------i~~--~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLS 143 (250)
T PF06813_consen 89 GR------IPS--LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLS 143 (250)
T ss_pred Cc------cCc--cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhH
Confidence 11 000 0334444444444444344444444445578885 7999999876555443
No 271
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.60 E-value=4.3 Score=38.64 Aligned_cols=97 Identities=12% Similarity=0.086 Sum_probs=60.1
Q ss_pred HcCCChhhH-HHHHHHHHHHHHHHHhhHhhhhh---hhCchHHHHHHHHHHHhhhh-hcc------------------ch
Q 014905 66 TYGFGKGEI-GQLFIAGFGSSMLFGTLVGSLAD---KQGRKRACVTYCITYMLSCV-TKH------------------SS 122 (416)
Q Consensus 66 ~~~~s~~~~-g~i~~~~~~~~~i~~~~~G~l~D---r~Grr~~l~~~~~~~~~~~l-~~~------------------~~ 122 (416)
..+.+...+ +.-.-...++..+++...+.+.| |+||++++.++.....++.+ ... .+
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 344444333 33333344555666666666664 68899998888665555443 211 12
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh--cccCcchhhH
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH--NKRGFDQQWL 163 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~--~~r~~~~~~~ 163 (416)
++....+..++.|++.+........ ++.+. ++|..+.++.
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~-ii~~~~~~~~~~~fsi~ 393 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYV-IIALLYPDDRAQAFSLF 393 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHH-HHHHHhcCchHHHHHHH
Confidence 4567788889999999988776666 77655 6666665555
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.56 E-value=0.45 Score=45.33 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=61.4
Q ss_pred HcC---CChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh--hccch---------hHHHHHHHH
Q 014905 66 TYG---FGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV--TKHSS---------EYKILMLGR 131 (416)
Q Consensus 66 ~~~---~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l--~~~~~---------~~~~l~~~r 131 (416)
+.+ +|+...|.+..+..++.+++.......--+..-|+++..+.+..++..+ ..+.+ +.+..+.--
T Consensus 246 ~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~ 325 (433)
T PF03092_consen 246 ALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDT 325 (433)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhH
Confidence 455 8899999999889999999999988888888888888888766665443 22221 223333334
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcccCcchh
Q 014905 132 IFGGIATSLLFSAFESWLVAEHNKRGFDQQ 161 (416)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~e~~~r~~~~~ 161 (416)
++..+.....+-+... +.+|.-++|....
T Consensus 326 ~l~~~~~~i~~mP~lv-l~a~lcP~G~Egt 354 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLV-LAARLCPKGSEGT 354 (433)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCCchHH
Confidence 5555555555555555 6666644444433
No 273
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.50 E-value=0.068 Score=42.57 Aligned_cols=91 Identities=10% Similarity=0.065 Sum_probs=63.1
Q ss_pred HHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHHHhhhcchh
Q 014905 290 MLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFEACVGIFWP 369 (416)
Q Consensus 290 ~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~ 369 (416)
.....+..++.+.+.++ .+.|+.+.++..... ......+.+ +.+..+..-.+.|++.+..+.
T Consensus 47 Y~~~~~s~l~~P~iv~~--lg~K~sm~lg~~~y~-~y~~~~~~~---------------~~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNK--LGPKWSMILGSLGYA-IYIASFFYP---------------NSYTLYPASALLGFGAALLWT 108 (156)
T ss_pred HHHHHHHHHhHHHHHHH--HhhHHHHHHHHHHHH-HHHHHHHhh---------------hHHHHHHHHHHHhhhhHHhhH
Confidence 33444555566667777 666667766665554 222222222 457778888899999999999
Q ss_pred HHHHHHhccCCccccceeeeeeeccccee
Q 014905 370 SIMKMRSQYIPEEARSTIMNFFRIPLNVF 398 (416)
Q Consensus 370 ~~~~~~~~~~p~~~rg~~~g~~~~~~~~~ 398 (416)
....++.+..+++.|++..|+.....+..
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s 137 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSS 137 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999888765554443
No 274
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.42 E-value=4.2 Score=40.18 Aligned_cols=144 Identities=15% Similarity=0.083 Sum_probs=89.7
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhh-hCchHHHHHHHHHHHhhhh-hccc--------------------h
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADK-QGRKRACVTYCITYMLSCV-TKHS--------------------S 122 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~l-~~~~--------------------~ 122 (416)
++++.+...+.-....+........+..+.++|- +||-+++.++.++..++.. ...+ +
T Consensus 66 ~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~ 145 (571)
T KOG1237|consen 66 LELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCE 145 (571)
T ss_pred HHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCccc
Confidence 7888888777777888888888888999999996 5788888888665555432 1110 0
Q ss_pred --h---HHHHHHHHHHHHhhhhhhhhhhhhhhhhhh-c---cc--CcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Q 014905 123 --E---YKILMLGRIFGGIATSLLFSAFESWLVAEH-N---KR--GFDQQWLSETFSKAIFLGNGLVAIISGLFGNLLVD 191 (416)
Q Consensus 123 --~---~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~-~---~r--~~~~~~~~~~~~~~~~~G~~~~~~~~~~l~~~~~~ 191 (416)
+ ...++.+.-+..+|.|+.-+...+ +-+|. + ++ ....+.+ ..+......|. .++..+..+.-+
T Consensus 146 ~~s~~q~~~~~~~l~lia~G~gg~r~~~~~-fGadQfd~~~~~~~~~~~~fF-nW~yf~~~~g~----l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 146 SPSKLQLAVLYGALYLIALGAGGIRPCLLA-FGADQFDELDPVEVKGIPSFF-NWFYFSQNGGA----LLAQTVLVYIQD 219 (571)
T ss_pred CcchHHHHHHHHHHHHheeccCCCCCcchh-hcccccCccCcchhhCcccch-hHHHHHHHHHH----HHHHHHHHhhhh
Confidence 1 135666667777788888777666 65544 2 11 1111112 22233333333 444444445545
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHH
Q 014905 192 TLALGPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 192 ~~~~~w~~~f~~~~~~~~~~~~~~~ 216 (416)
.. +|.+.|.+..+...++.++..
T Consensus 220 ~~--~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 220 NV--GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred cc--cceeeccHHHHHHHHHHHHHH
Confidence 55 899999888877777666554
No 275
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.05 E-value=0.083 Score=50.10 Aligned_cols=100 Identities=15% Similarity=0.117 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.|++.+...++..+..++.++...|. .+.++++..+..+..+...+........ .+ ..+..+.+=++.|
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~~~-------~~---~~y~mL~~R~l~G 141 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAYVP-------NG---VKYLMLVARILTG 141 (488)
T ss_pred hhHHHHHHHHHHHhcchhhccccccc-CCcccCHHHHHHHHHHHHHHHHHHHhcc-------cc---hHHHHHHHHHHcC
Confidence 89999999999999999999999984 3347788887777776665553322210 00 2244444444444
Q ss_pred HhhhcchhHHHHHHhccCCccccceeeeeeec
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 393 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~ 393 (416)
++.+. ....-.++++..-.++|.++++....
T Consensus 142 vg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 142 VGVGN-FAVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred cCccc-HHHHHHHHHhccCccchHHHHHHhhh
Confidence 44333 44567778876666777777776654
No 276
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.82 E-value=12 Score=35.68 Aligned_cols=247 Identities=13% Similarity=0.026 Sum_probs=117.4
Q ss_pred HHHHHHHHcC---CChhhHHHHHHHHHH-HHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh-hcc-------------
Q 014905 59 YVYYLYSTYG---FGKGEIGQLFIAGFG-SSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV-TKH------------- 120 (416)
Q Consensus 59 ~l~~l~~~~~---~s~~~~g~i~~~~~~-~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l-~~~------------- 120 (416)
++.++-+++. .+++.+..+-...-+ +.++..++.+++.+++.|.+++-+.+..+....+ +++
T Consensus 45 ~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~ 124 (509)
T COG3202 45 LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDP 124 (509)
T ss_pred HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCH
Confidence 4423334554 445777888888777 6678888999999999999987665433332211 111
Q ss_pred --ch-----------------hHHHHHHHHHHHHhhhhhhhh-hhhhhhhhhhcccCcchhhHHHHHHHHHHHHhhHHHH
Q 014905 121 --SS-----------------EYKILMLGRIFGGIATSLLFS-AFESWLVAEHNKRGFDQQWLSETFSKAIFLGNGLVAI 180 (416)
Q Consensus 121 --~~-----------------~~~~l~~~r~l~G~~~~~~~~-~~~~~~i~e~~~r~~~~~~~~~~~~~~~~~G~~~~~~ 180 (416)
++ +.|..-+..++.-+-.+.... .... ...|..+...+.+.+ ..++++..++. .
T Consensus 125 ~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~-faNeitt~~eakRFy-~lf~l~~ni~l----l 198 (509)
T COG3202 125 EFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQ-FANEITTIEEAKRFY-PLFGLGANISL----L 198 (509)
T ss_pred HHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHhhhhH-HHHHHHHHHHH----H
Confidence 11 112222222222222221111 1111 222332222222223 55555555545 4
Q ss_pred HHHHHHHHHHhhh--------ccCchhHHHHHHHHHHHHHHHHHHhcc---cCCC---Cccc----hhhHHHhhhHHHhh
Q 014905 181 ISGLFGNLLVDTL--------ALGPVAPFDAAACFLAFGMVIILASWT---ENYG---DPEK----KNLLAQFKGAALAI 242 (416)
Q Consensus 181 ~~~~l~~~~~~~~--------~~~w~~~f~~~~~~~~~~~~~~~~~~~---~~~~---~~~~----~~~~~~~~~~~~~~ 242 (416)
+++.+..++.++. +...+..+.+.+....++..+..+..+ +++. +..+ ++.+-...++++.+
T Consensus 199 lsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i 278 (509)
T COG3202 199 LSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMI 278 (509)
T ss_pred HHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHH
Confidence 4444444443211 001233334444444444444433322 2222 1001 11112234577778
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC---c--hHHHHHHHHHH-HHHhhHHHHHHhhcccccchh
Q 014905 243 ASDERIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---P--HGFIFATFMLA-SMLGSSFASRLLAHSSLRVES 313 (416)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~g~~~~~~~~~-~~~~~~~~~~l~~r~~~~~~~ 313 (416)
.|+|.+..+.+...+++.+.+.+-..|-....+..... . .|-+....++. .++.....+.+.|| .|...
T Consensus 279 ~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~--~GW~~ 353 (509)
T COG3202 279 LRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRR--VGWFT 353 (509)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH--hhHHH
Confidence 88888888877777777666665554543333221111 1 33333344554 55567778888888 44433
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=89.58 E-value=8.9 Score=35.90 Aligned_cols=104 Identities=10% Similarity=0.075 Sum_probs=57.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHH---HHh---hhhhccchhHHHHHHHHHHHHhhhhhhhhh
Q 014905 71 KGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCIT---YML---SCVTKHSSEYKILMLGRIFGGIATSLLFSA 144 (416)
Q Consensus 71 ~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~---~~~---~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (416)
..+-.+....+.+|..++.--. .+. |+ |++.+.+.+- ..+ -....+.++.|..++.-+..|+..|..+..
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~-~~~-ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSL-PFF-RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcce-eee-eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 3455666666666655554321 111 33 4444444221 111 111345678899999999999999988887
Q ss_pred hhhhhhhhh---cccCcchhhHHHHHHHHHHHHhhHHHHHHH
Q 014905 145 FESWLVAEH---NKRGFDQQWLSETFSKAIFLGNGLVAIISG 183 (416)
Q Consensus 145 ~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~~~~~~~~~ 183 (416)
... .+.|. ++|.... +..+++...|..+++.++-
T Consensus 356 tF~-~I~~~~~~~~REFsl----g~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 356 TFY-RISEEVPPEDREFSL----GAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHH-HHHhcCCHHHHHHHH----HHHHHHhhHHHHHHHHHHH
Confidence 776 55544 6677774 4444444455533334443
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.46 E-value=13 Score=35.42 Aligned_cols=108 Identities=18% Similarity=0.072 Sum_probs=68.2
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHH------HHHhhhh-hccch----hHHHHHHHHHH
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCI------TYMLSCV-TKHSS----EYKILMLGRIF 133 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~------~~~~~~l-~~~~~----~~~~l~~~r~l 133 (416)
++.|+|+.++|..-+...+..+.+.....++.+|+|..|.-.++.. ..++..+ ..-.+ +...++.+-.+
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 6679999999999999999999999999999999998887766633 2222233 22211 33344444444
Q ss_pred HHhhhhhhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHH
Q 014905 134 GGIATSLLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFL 173 (416)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~ 173 (416)
.-+|.=...-+..- ++-|. ++||..++..++..+....+
T Consensus 366 SR~GLW~fDL~~~q-i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 366 SRIGLWSFDLAVTQ-IMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHhhhHHHHH-hhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 44443333333333 44444 77888766664444444433
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=87.55 E-value=0.68 Score=43.35 Aligned_cols=156 Identities=10% Similarity=0.034 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCc---hHHHHHHHHHHHHHhhHHHHHHhhcc--cccchhHHHHHHHH
Q 014905 247 RIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSFASRLLAHS--SLRVESYMQIVFII 321 (416)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~l~~r~--~~~~~~~~~~~~~~ 321 (416)
+........+-.+++.-. ...|.|.|.++. +.+ .+.+....-+..++..++.|..+||. ++++||+.+.....
T Consensus 33 ~li~v~~ia~Gvqf~wA~-elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWAL-ELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHH-HhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 333333344444555444 444777777653 232 55555556666777788888899876 57778877665544
Q ss_pred HHH-HHHHHHHhhccC--CCCCCCCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccce-eeeeeecccce
Q 014905 322 SSA-SLLIPILTNFLE--TPPDVRGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARST-IMNFFRIPLNV 397 (416)
Q Consensus 322 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~-~~g~~~~~~~~ 397 (416)
... .+.+..+....- -..+.+.+.-.+.....++.+-+.-+.........-++..+....+.+.+ +.+.+.....+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 432 333322222110 00011110100122334445555666777777888889999887777666 88887776666
Q ss_pred eeeeeee
Q 014905 398 FVCIVLY 404 (416)
Q Consensus 398 ~~~~~~~ 404 (416)
...++-.
T Consensus 191 GnvLGY~ 197 (498)
T KOG0637|consen 191 GNVLGYA 197 (498)
T ss_pred cceeeee
Confidence 6665544
No 280
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=87.19 E-value=16 Score=30.46 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 014905 163 LSETFSKAIFLGNGLVAIISGLFGNLLVDT 192 (416)
Q Consensus 163 ~~~~~~~~~~~G~~~~~~~~~~l~~~~~~~ 192 (416)
....++.|...+..+.+.+...++..+.+.
T Consensus 34 ~~l~y~~GRi~sY~llG~l~g~~G~~l~~~ 63 (199)
T PF13386_consen 34 RHLLYNLGRILSYTLLGALAGLLGSGLSLS 63 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347788888887766666666676666543
No 281
>COG2119 Predicted membrane protein [Function unknown]
Probab=85.14 E-value=19 Score=29.29 Aligned_cols=69 Identities=19% Similarity=0.060 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh
Q 014905 44 IVYSLMMAGDWLQGPYVYYLYSTYGFGK-GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML 114 (416)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~~~~~~s~-~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (416)
+.+++.-++|..+..-+ .+-.+.+... -.+|-..+ ..++..++-..+.+++||+..|++-.++.+++.+
T Consensus 107 i~~FlaE~GDKTQiATI-aLaA~~~~~~~V~~Gt~lg-~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~ 176 (190)
T COG2119 107 ITFFLAELGDKTQIATI-ALAADYHSPWAVFAGTTLG-MILASVLAVLLGKLIAGKLPERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHHhccHHHHHHH-HHhhcCCCceeeehhhHHH-HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 44446667777776544 4334555532 22233322 3456677777888999999999988877555444
No 282
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=85.00 E-value=31 Score=31.64 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=59.1
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHH
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTF 360 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 360 (416)
+.+.++........+.+.+.|.+.|| .|+||.-+..+++-...++.- ... +.+..++.=++.
T Consensus 70 qIa~Lf~~Gf~Ss~i~g~~~G~laD~--~Grk~~cl~~cily~~scl~k-~~~---------------~~~~L~~GRvlg 131 (354)
T PF05631_consen 70 QIAILFVAGFASSAIFGTFVGSLADR--YGRKKACLLFCILYSLSCLTK-HSS---------------NYPVLLLGRVLG 131 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHH-hcc---------------ccHHHHHHHHHH
Confidence 37777777788888899999999999 777776666555555444321 111 456666666777
Q ss_pred HHhhhcchhHHHH-HHhcc----CCccccceeeeee
Q 014905 361 EACVGIFWPSIMK-MRSQY----IPEEARSTIMNFF 391 (416)
Q Consensus 361 ~~~~g~~~~~~~~-~~~~~----~p~~~rg~~~g~~ 391 (416)
|+.....+...-+ ++.|+ +|++..+..++..
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~ 167 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLA 167 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 7777776655544 33443 4555555555433
No 283
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=82.96 E-value=0.86 Score=45.75 Aligned_cols=113 Identities=17% Similarity=0.186 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
...++..+....-+...+++++.|+. .|.++.+.++.++..+...++..... ++.. ... .....+..+.+..
T Consensus 25 A~~i~~~f~~l~yl~pilGg~iAD~~-lG~~~tIl~~~ii~~lG~~llai~a~---~~~~-~~~---~~~~~l~gLaLia 96 (654)
T TIGR00926 25 STVLFHTFTYLCYLTPLIGAIIADGW-LGKFKTILYLSIVYVVGHALLSFGAI---PSSG-HPL---HDLLDLLGLALIA 96 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhccC---cccc-cch---HHHHHHHHHHHHH
Confidence 33444445555556677888888886 78888887777776655544433211 0000 000 2233556677777
Q ss_pred HhhhcchhHHHHHHhccCCccc---cceeeeeeecccceeeeee
Q 014905 362 ACVGIFWPSIMKMRSQYIPEEA---RSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~~~---rg~~~g~~~~~~~~~~~~~ 402 (416)
.+.|..-|...+...+.+++++ |-+.+.++....|++..++
T Consensus 97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis 140 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLIS 140 (654)
T ss_pred hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999998887654 4555666666666665544
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.56 E-value=44 Score=31.50 Aligned_cols=105 Identities=13% Similarity=-0.011 Sum_probs=72.8
Q ss_pred HHHHHHHhHHHHHHHHHHHc---CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHH--HHHhhhh-hccc
Q 014905 48 LMMAGDWLQGPYVYYLYSTY---GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCI--TYMLSCV-TKHS 121 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~---~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~--~~~~~~l-~~~~ 121 (416)
+...+.....-|...++++. +-+..--|.+-++..+.+.+.++..|++..++++..-+.++.. +.+...+ +...
T Consensus 258 ~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t 337 (412)
T PF01770_consen 258 FATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT 337 (412)
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55556666666765566666 2222333999999999999999999999877777655555533 3333334 7788
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 014905 122 SEYKILMLGRIFGGIATSLLFSAFESWLVAEH 153 (416)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (416)
+|.|..+++.++.+.......+.+.. -++..
T Consensus 338 ~~Iwv~Y~~yIif~~~y~fliTiA~~-qIA~~ 368 (412)
T PF01770_consen 338 GNIWVCYAGYIIFRSLYMFLITIASF-QIAKN 368 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh
Confidence 89999999999988877777666655 44433
No 285
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=81.42 E-value=29 Score=31.77 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=68.4
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCChhhH--HHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHH--HHHhhhh-hccch
Q 014905 48 LMMAGDWLQGPYVYYLYSTYGFGKGEI--GQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCI--TYMLSCV-TKHSS 122 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~~~s~~~~--g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~--~~~~~~l-~~~~~ 122 (416)
+...+..-..-+...++++..-++..+ |..-++..+.+++.++..|.+--++.|..-++++.. ..+...+ +..++
T Consensus 245 l~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~ 324 (433)
T KOG3810|consen 245 LASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ 324 (433)
T ss_pred HhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc
Confidence 333343333345434446665333333 888888888999999999999988888755544433 2232333 66778
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 014905 123 EYKILMLGRIFGGIATSLLFSAFESWLVAEH 153 (416)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~e~ 153 (416)
++|..+++.++.........+.+.. -+++.
T Consensus 325 ~Iw~~Ya~yvlfr~~y~l~itiA~~-~iA~n 354 (433)
T KOG3810|consen 325 HIWVCYAGYVLFRVIYQLTITIATF-QIARN 354 (433)
T ss_pred ceehhhhhHHHHHhhHhhhhhHHHH-HHHHh
Confidence 8999999888888777776666666 55544
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=80.44 E-value=6.1 Score=34.68 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccchhHHHHHHHHHH
Q 014905 282 HGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDVRGGGISLSGSLQLIGFSTFE 361 (416)
Q Consensus 282 ~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 361 (416)
.+...+...+...++.+..|++.|| .+.|+..................... . +.+.........+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~--~g~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~~~~g 105 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDR--YGRRKVLIIGLLLFLLGTLLLALAPN----------V---GLALLLILRLLQG 105 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccc--ccchHHHHHHHHHHHHHHHHHHhCcc----------c---hHHHHHHHHHHHH
Confidence 5777777788888888999999999 55554444444321212111111110 0 2344444555567
Q ss_pred HhhhcchhHHHHHHhccCCc-cccceeeeeeec
Q 014905 362 ACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRI 393 (416)
Q Consensus 362 ~~~g~~~~~~~~~~~~~~p~-~~rg~~~g~~~~ 393 (416)
+..+...+....+..|..|+ +.|+...+....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 77788889999999999998 567766665543
No 287
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=78.93 E-value=20 Score=25.20 Aligned_cols=59 Identities=19% Similarity=0.313 Sum_probs=41.2
Q ss_pred hhcccccCCCCC---chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 014905 269 WTPALSPNDEEI---PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPI 330 (416)
Q Consensus 269 ~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 330 (416)
..|...++. +. +.|++.+...++.++|.+...++.++ .+.++.+..+.....+......
T Consensus 14 lLP~M~~~~-~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 14 LLPLMQADG-GLSLSQAGWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred HhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence 566666553 33 38899999999999999999999887 5555666655555554444333
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=78.39 E-value=0.81 Score=41.36 Aligned_cols=114 Identities=17% Similarity=0.120 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCCC-CCCCcccchhHHHHHHHHHHHh
Q 014905 285 IFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPDV-RGGGISLSGSLQLIGFSTFEAC 363 (416)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 363 (416)
.+..+.++..+|+.+.++..-+ ...+|.+......-. .+ ++.+ ...+..+.. ..+..-.+.+..++.+.++++.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~--~~~~~~l~~~s~~R~-~f-iPlf-~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~T 261 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWP--GPSPRWLWILSLLRF-LF-IPLF-LLCNVQPRPRYLPVLFNSDAWFIILMLLFGFT 261 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEec--ccccccHHHHHHHHH-HH-HHHH-HHHHhhcccccCCCcccchHHHHHHHHHHHHc
Confidence 4556788899998887764322 113333333222222 11 1211 111111110 0111112446677788899999
Q ss_pred hhcchhHHHHHHhccCCccccceeeeeeecccceeeeeee
Q 014905 364 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIVL 403 (416)
Q Consensus 364 ~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~~ 403 (416)
.|........+..+.+++++|..+-.+..+..+.+...|.
T Consensus 262 NGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 262 NGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp -----HHHH-------------------------------
T ss_pred cchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888777776666655543
No 289
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.67 E-value=3.8 Score=35.47 Aligned_cols=58 Identities=17% Similarity=0.254 Sum_probs=44.9
Q ss_pred HHHHHHHhHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhh---------hhhCchHHHH
Q 014905 48 LMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLA---------DKQGRKRACV 106 (416)
Q Consensus 48 ~~~~~~~~~~~~l~~l~-~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~---------Dr~Grr~~l~ 106 (416)
...+..+....|+ -+| ++.|.++..-..++-+..+...+..++.|..+ ||+|||+..-
T Consensus 28 lNDitAScWFTYl-llfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh 95 (412)
T KOG4830|consen 28 LNDITASCWFTYL-LLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWH 95 (412)
T ss_pred HhhHHHHHHHHHH-HHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeee
Confidence 4555555666676 556 89999998888999999999999999888554 5999988653
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=71.58 E-value=67 Score=30.73 Aligned_cols=100 Identities=10% Similarity=-0.004 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhCch--HHHHHHHH--HHHhh-hhhc---------cchhHHHHHHHHHHHHhhhh
Q 014905 74 IGQLFIAGFGSSMLFGTLVGSLADKQGRK--RACVTYCI--TYMLS-CVTK---------HSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 74 ~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr--~~l~~~~~--~~~~~-~l~~---------~~~~~~~l~~~r~l~G~~~~ 139 (416)
.-.++..+.++-.+|..+..+.. .-++| ++.+.+.. ++.-. .++. ..++-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 35667778888888887554321 11222 44333311 11111 1121 22455667777899999998
Q ss_pred hhhhhhhhhhhhhh---cccCcchhhHHHHHHHHHHHHh
Q 014905 140 LLFSAFESWLVAEH---NKRGFDQQWLSETFSKAIFLGN 175 (416)
Q Consensus 140 ~~~~~~~~~~i~e~---~~r~~~~~~~~~~~~~~~~~G~ 175 (416)
-..+.... +..+. ++|..++.++......|...|.
T Consensus 388 y~~s~~m~-~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 388 YLGSLSMC-LAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred HHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77775555 55533 5555554444444444444444
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=66.48 E-value=94 Score=27.53 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhCchH--HHHHHHHHHHhh----hh-hccch---hHHHHHHHHHHHHhhhhhhhh
Q 014905 74 IGQLFIAGFGSSMLFGTLVGSLADKQGRKR--ACVTYCITYMLS----CV-TKHSS---EYKILMLGRIFGGIATSLLFS 143 (416)
Q Consensus 74 ~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~--~l~~~~~~~~~~----~l-~~~~~---~~~~l~~~r~l~G~~~~~~~~ 143 (416)
-|.+++.+++..++++-+..++..|-..|. .+.+..+..... .+ ...++ ++..-+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 399999999999999999988888766543 344443332222 22 11222 333335555566667777777
Q ss_pred hhhhhhhhh
Q 014905 144 AFESWLVAE 152 (416)
Q Consensus 144 ~~~~~~i~e 152 (416)
.... +-++
T Consensus 364 Simk-mRsq 371 (454)
T KOG4332|consen 364 SIMK-MRSQ 371 (454)
T ss_pred HHHH-HHHh
Confidence 6655 4443
No 292
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=59.52 E-value=51 Score=31.71 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=66.6
Q ss_pred hHHHHHHHHH-HHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhc--cC-CCCC--------CCCC-Cc--
Q 014905 282 HGFIFATFML-ASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNF--LE-TPPD--------VRGG-GI-- 346 (416)
Q Consensus 282 ~g~~~~~~~~-~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~--------~~~~-~~-- 346 (416)
...+-....+ ++++..++..++.++ ...++............+.+..+... .. -+|+ .+.+ ++
T Consensus 63 I~FlK~~~vlP~avif~~iy~kl~~~--lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 63 ISFLKTWGVLPSAVIFTIIYQKLLNI--LTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hHHHHHHHhchHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 4444444433 677778889999998 66666555544444433333322221 10 0111 0112 11
Q ss_pred ---ccchhHHHHHHHHHHHhhhcchh-HHHHHHhccCCccccceeeeeeecccceeeee
Q 014905 347 ---SLSGSLQLIGFSTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPLNVFVCI 401 (416)
Q Consensus 347 ---~~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~ 401 (416)
-.+.|...........-...... ..+...+|....++-.|-++++++..|+...+
T Consensus 141 ~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lll 199 (509)
T COG3202 141 FILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLL 199 (509)
T ss_pred eeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHH
Confidence 01224444444444444444444 66788899999999999999998888876544
No 293
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=59.36 E-value=1.3e+02 Score=26.60 Aligned_cols=81 Identities=10% Similarity=0.135 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhccccccCCCCccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHH
Q 014905 9 FACLAALVVAMELSKNSKDRIGTSSSFNSFMNSYIIVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLF 88 (416)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~s~~~~g~i~~~~~~~~~i~ 88 (416)
+..++++.+...+...+++++++.++.+..+|.+. ...+..++++.+. .+ | +..+.|+.++=+-. .++..++
T Consensus 107 ~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~-~Ll~stigy~~Y~-~~-~--~~~~~~~~~~~lPq---aiGm~i~ 178 (269)
T PF06800_consen 107 FLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGIL-ALLISTIGYWIYS-VI-P--KAFHVSGWSAFLPQ---AIGMLIG 178 (269)
T ss_pred HHHHHHHHHHHHHhccccccccccccccchhhHHH-HHHHHHHHHHHHH-HH-H--HhcCCChhHhHHHH---HHHHHHH
Confidence 33444444455554433333332222233344443 3344455554432 22 2 44666665554433 3444455
Q ss_pred HhhHhhhhh
Q 014905 89 GTLVGSLAD 97 (416)
Q Consensus 89 ~~~~G~l~D 97 (416)
+.+.....+
T Consensus 179 a~i~~~~~~ 187 (269)
T PF06800_consen 179 AFIFNLFSK 187 (269)
T ss_pred HHHHhhccc
Confidence 555555443
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=54.00 E-value=1.8e+02 Score=27.38 Aligned_cols=76 Identities=8% Similarity=-0.045 Sum_probs=43.9
Q ss_pred HHHHHHH-HHHHHHHHHhhHhhhhhhhCchHHHHHHHH-HHHhhhh--h------ccchhHHHHHHHHHHHHhhhhhhhh
Q 014905 74 IGQLFIA-GFGSSMLFGTLVGSLADKQGRKRACVTYCI-TYMLSCV--T------KHSSEYKILMLGRIFGGIATSLLFS 143 (416)
Q Consensus 74 ~g~i~~~-~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~-~~~~~~l--~------~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (416)
.-.+... +.+...+|.+.+.++-++ +||+..+..++ ...+-.+ + ..-.+-+++.....+.|+..|-...
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3444555 788888887766666554 34444443322 1111111 1 2234567778888899999886666
Q ss_pred hhhhhhhh
Q 014905 144 AFESWLVA 151 (416)
Q Consensus 144 ~~~~~~i~ 151 (416)
.... +..
T Consensus 363 l~m~-~aP 369 (406)
T KOG1479|consen 363 LIMM-YAP 369 (406)
T ss_pred heeh-hcC
Confidence 5554 444
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.30 E-value=80 Score=23.18 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHH
Q 014905 283 GFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASL 326 (416)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~ 326 (416)
++-.+.-.++.++.+...||+.||+ .+.....++...+.+.+.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~-agTsPwglIv~lllGf~A 87 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKF-AGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHH
Confidence 3334444677777778889999996 555555555444444333
No 296
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=52.56 E-value=3.3 Score=40.69 Aligned_cols=119 Identities=9% Similarity=0.054 Sum_probs=2.1
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCC------------------C-
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIPILTNFLETPPD------------------V- 341 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~- 341 (416)
+.|.+.+..-++.++..++..++++| .++.|.+-.+..+.++..++... ++...++. +
T Consensus 39 ~~G~i~s~~di~~~~~~~~vsy~g~~--~hrprwig~g~~~~~~g~~l~~l-Phf~~~~y~~~~~~~~~~~~~~~~~~c~ 115 (539)
T PF03137_consen 39 QSGLISSSYDIGSLVVVLFVSYFGGR--GHRPRWIGIGALLMGLGSLLFAL-PHFLSGPYSYEEASNSNGNSSISSNLCD 115 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh--cCCcceeeecHHHHHHHHHHHhc-cHhhcCCCcccccccccccccccccccc
Confidence 38999999999999999999999988 44444454555544444333222 11111000 0
Q ss_pred -----------------CCCCcccchhHHHHHHHHHHHhhhcchhHHHHHHhccCCccccceeeeeeecccceeeeee
Q 014905 342 -----------------RGGGISLSGSLQLIGFSTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNVFVCIV 402 (416)
Q Consensus 342 -----------------~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~~~~~~ 402 (416)
+.+..+...+..+++.++.|++....++...+|+-|.++++.-+...|+......++-.+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 116 SSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALG 193 (539)
T ss_dssp ------------------------------------SSS---------------------------------------
T ss_pred ccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHH
Confidence 0000000123445556666677677888889999999999998888888776665544333
No 297
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.25 E-value=2.8e+02 Score=28.57 Aligned_cols=57 Identities=14% Similarity=0.015 Sum_probs=39.5
Q ss_pred HHHHHHHH--HHcCCChhhHHHHHHHHHHH-HHHHHhhHhhhhhhhC--chHHHHHHHHHHHh
Q 014905 57 GPYVYYLY--STYGFGKGEIGQLFIAGFGS-SMLFGTLVGSLADKQG--RKRACVTYCITYML 114 (416)
Q Consensus 57 ~~~l~~l~--~~~~~s~~~~g~i~~~~~~~-~~i~~~~~G~l~Dr~G--rr~~l~~~~~~~~~ 114 (416)
..|+ |-| +++|.+++.+..+.+...+. ..+|..++|.+..|+. .|....+.++...+
T Consensus 412 ~tFl-PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 412 ITFL-PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHhh-HHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 3466 666 59999999999988766655 4577778899999875 44444444443333
No 298
>PRK11469 hypothetical protein; Provisional
Probab=44.63 E-value=1.8e+02 Score=24.05 Aligned_cols=31 Identities=10% Similarity=-0.056 Sum_probs=19.8
Q ss_pred HHHhhHhhhhhhhCchHHHHHHHHHHHhhhh
Q 014905 87 LFGTLVGSLADKQGRKRACVTYCITYMLSCV 117 (416)
Q Consensus 87 i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l 117 (416)
.+.....++.+++|||.-++-+.++..++.-
T Consensus 150 ~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 150 LGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445566778888777767777666654
No 299
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=43.98 E-value=2.2e+02 Score=29.20 Aligned_cols=49 Identities=8% Similarity=0.031 Sum_probs=29.8
Q ss_pred hHhhhhhh----hCchHHHHHHHHHHHhhhh-h-ccchhHHHHHHHHHHHHhhhh
Q 014905 91 LVGSLADK----QGRKRACVTYCITYMLSCV-T-KHSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 91 ~~G~l~Dr----~Grr~~l~~~~~~~~~~~l-~-~~~~~~~~l~~~r~l~G~~~~ 139 (416)
+++.++|. -||.+-++++..++.++.+ . ...+..|.+...-.+.+++.+
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 34556663 3567777888777777766 3 344555666666555555444
No 300
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=43.79 E-value=2.5e+02 Score=28.83 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=29.2
Q ss_pred Hhhhhhh----hCchHHHHHHHHHHHhhhh--hccchhHHHHHHHHHHHHhhhh
Q 014905 92 VGSLADK----QGRKRACVTYCITYMLSCV--TKHSSEYKILMLGRIFGGIATS 139 (416)
Q Consensus 92 ~G~l~Dr----~Grr~~l~~~~~~~~~~~l--~~~~~~~~~l~~~r~l~G~~~~ 139 (416)
.+.++|. -||.+-+.++.+++.++.+ ....+..|++..+-.+.+++.+
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3556663 3566777777777777666 3345566666666655555444
No 301
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=43.30 E-value=2.1e+02 Score=24.40 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=23.6
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHH
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYM 315 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~ 315 (416)
+-+.....+++++...-+..+..+++.+...||..
T Consensus 165 ~Gal~mlaFGlGTlP~ll~~G~~s~~~s~~~r~~~ 199 (232)
T COG2836 165 EGALVMLAFGLGTLPNLLAMGIFSSKLSKSSRKRL 199 (232)
T ss_pred HHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777788888887778877777533344443
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.19 E-value=78 Score=23.24 Aligned_cols=25 Identities=32% Similarity=0.339 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhhhh
Q 014905 75 GQLFIAGFGSSMLFGTLVGSLADKQ 99 (416)
Q Consensus 75 g~i~~~~~~~~~i~~~~~G~l~Dr~ 99 (416)
+.-.+.-+++..+.....||+.|||
T Consensus 45 a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555666777777789999986
No 303
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=37.65 E-value=2.7e+02 Score=24.07 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=30.2
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh
Q 014905 68 GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV 117 (416)
Q Consensus 68 ~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l 117 (416)
+.+.++...+.....+-..+.+.+. +-||.+||+.+-......++..+
T Consensus 93 ~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 93 NGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHH
Confidence 3555666666665555555554443 56999999988776665555444
No 304
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=32.37 E-value=1.2e+02 Score=22.31 Aligned_cols=48 Identities=17% Similarity=0.107 Sum_probs=36.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh
Q 014905 70 GKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV 117 (416)
Q Consensus 70 s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l 117 (416)
.++..|=+++++.-...+.++.+++..|+.-+.+-=.++..+..++..
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~ 99 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVA 99 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHH
Confidence 336678899999999999999999999988876665555544444433
No 305
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=30.42 E-value=1.5e+02 Score=24.46 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhhHhhhhhhhCc
Q 014905 80 AGFGSSMLFGTLVGSLADKQGR 101 (416)
Q Consensus 80 ~~~~~~~i~~~~~G~l~Dr~Gr 101 (416)
-+.++..+.+.+.|+++||..+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 3556777888999999999986
No 306
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=30.30 E-value=5.4e+02 Score=25.35 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHhhHHHHHHhhc
Q 014905 285 IFATFMLASMLGSSFASRLLAH 306 (416)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~l~~r 306 (416)
....+.+.+.+++...+++-+.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~ 323 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKS 323 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHH
Confidence 3344466666777777777766
No 307
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=29.62 E-value=82 Score=24.96 Aligned_cols=30 Identities=10% Similarity=0.014 Sum_probs=22.0
Q ss_pred hhHHHHHHhccCCccccceeeeeeecccce
Q 014905 368 WPSIMKMRSQYIPEEARSTIMNFFRIPLNV 397 (416)
Q Consensus 368 ~~~~~~~~~~~~p~~~rg~~~g~~~~~~~~ 397 (416)
..+.|-.++..-+++..|+..|+-.+-.|.
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 445566777788888899998887665554
No 308
>PRK11588 hypothetical protein; Provisional
Probab=29.54 E-value=5.5e+02 Score=25.17 Aligned_cols=34 Identities=15% Similarity=0.028 Sum_probs=18.1
Q ss_pred HhhhhhhhCchHHHHHH--HHHHHhhhh-hccchhHH
Q 014905 92 VGSLADKQGRKRACVTY--CITYMLSCV-TKHSSEYK 125 (416)
Q Consensus 92 ~G~l~Dr~Grr~~l~~~--~~~~~~~~l-~~~~~~~~ 125 (416)
.+++.+|++.|..+++- +.+++++.. .+.+.+..
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i 172 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAI 172 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHH
Confidence 46778888866544443 334444333 45555443
No 309
>PRK11689 aromatic amino acid exporter; Provisional
Probab=28.82 E-value=4.2e+02 Score=23.58 Aligned_cols=45 Identities=13% Similarity=-0.079 Sum_probs=25.7
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHh
Q 014905 68 GFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYML 114 (416)
Q Consensus 68 ~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~ 114 (416)
+.+....+.+.....+...+.+.+. +-||.++|+..-......++
T Consensus 88 ~~~a~~a~~l~~~~Pi~~~ll~~~~--~~e~~~~~~~~g~~l~~~Gv 132 (295)
T PRK11689 88 RRQAIEVGMVNYLWPSLTILFAVLF--NGQKANWLLIPGLLLALAGV 132 (295)
T ss_pred cccchHHHHHHHHhHHHHHHHHHHH--hcCCccHHHHHHHHHHHHhH
Confidence 4555666777666555555544433 34788888865444444333
No 310
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=27.63 E-value=1e+02 Score=19.73 Aligned_cols=23 Identities=9% Similarity=-0.083 Sum_probs=17.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHh
Q 014905 196 GPVAPFDAAACFLAFGMVIILAS 218 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~ 218 (416)
+||...++.+.+.++.+.+.-..
T Consensus 4 g~r~~~~~ggfVg~iG~a~Ypi~ 26 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYPIY 26 (58)
T ss_pred cccchhhHHHHHHHHHHHHhhhh
Confidence 89998888888888777665433
No 311
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=27.52 E-value=3.9e+02 Score=22.84 Aligned_cols=50 Identities=14% Similarity=0.068 Sum_probs=35.7
Q ss_pred HHcCCChhhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhhh
Q 014905 65 STYGFGKGEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSCV 117 (416)
Q Consensus 65 ~~~~~s~~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~l 117 (416)
+..+.|..++|...+..+.... ...-.+.||.+.|+....+.....++..
T Consensus 124 ~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gly 173 (224)
T PF09930_consen 124 PSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGLY 173 (224)
T ss_pred HhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 6788999999988876655444 5667778888877776777665555543
No 312
>PRK02237 hypothetical protein; Provisional
Probab=26.96 E-value=2e+02 Score=21.19 Aligned_cols=45 Identities=13% Similarity=-0.023 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhHhhhhhhhCchHHHHHHHHHHHhhh
Q 014905 72 GEIGQLFIAGFGSSMLFGTLVGSLADKQGRKRACVTYCITYMLSC 116 (416)
Q Consensus 72 ~~~g~i~~~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 116 (416)
+..|=+++++.-...+.++.+++..|+.-+-+-=.++..+..++.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~ 100 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGM 100 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhH
Confidence 458999999999999999999999998876665555544444443
No 313
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.96 E-value=3.6e+02 Score=22.22 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=20.2
Q ss_pred HHHHHHhhHHHHHHhhcccccchhHHHHHHHHH
Q 014905 290 MLASMLGSSFASRLLAHSSLRVESYMQIVFIIS 322 (416)
Q Consensus 290 ~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~ 322 (416)
.+++.++...+.++++| .+.|+.-..+.++.
T Consensus 144 ~l~s~laVl~G~~ia~k--i~~r~l~~~aallF 174 (190)
T COG2119 144 ILASVLAVLLGKLIAGK--LPERLLRFIAALLF 174 (190)
T ss_pred HHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHH
Confidence 56667777788888888 55555555544443
No 314
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=26.67 E-value=4.5e+02 Score=23.19 Aligned_cols=59 Identities=14% Similarity=0.066 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhHhhhhh-hhCchHHHH----HHHHHHHhhhhh--ccc--h--hHHHHHHHHHHHHhhh
Q 014905 80 AGFGSSMLFGTLVGSLAD-KQGRKRACV----TYCITYMLSCVT--KHS--S--EYKILMLGRIFGGIAT 138 (416)
Q Consensus 80 ~~~~~~~i~~~~~G~l~D-r~Grr~~l~----~~~~~~~~~~l~--~~~--~--~~~~l~~~r~l~G~~~ 138 (416)
++..+..++....|.+.. ++.||+-+. .+.+...++.++ ... + +...+++.-++.|...
T Consensus 149 ~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 149 LFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 444455566666788776 345555433 123333333331 111 1 3566777777777654
No 315
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=25.38 E-value=3.5e+02 Score=24.96 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=11.6
Q ss_pred hHHHHHHHHHHHhhhcchhHH
Q 014905 351 SLQLIGFSTFEACVGIFWPSI 371 (416)
Q Consensus 351 ~~~~~~~~l~~~~~g~~~~~~ 371 (416)
...+..-...|++.+..+...
T Consensus 111 ~tlVPa~~~~G~aa~p~W~Sk 131 (390)
T KOG3097|consen 111 ETLVPAGLVLGMAAGPIWASK 131 (390)
T ss_pred HhhccHHHhhccccccccccC
Confidence 334555566666666654433
No 316
>PRK02237 hypothetical protein; Provisional
Probab=24.75 E-value=2.9e+02 Score=20.40 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=36.6
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIP 329 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 329 (416)
+.|-+++..+-..++.+++.++..|+ .++.+.=.++..++.+...+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg--~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDG--VRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcC--cCCChhHHHhHHHHHHhHHHh
Confidence 37889999988889999999999999 777777666666665554443
No 317
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=24.58 E-value=2.3e+02 Score=22.39 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhhHhhhhhhhCchH
Q 014905 80 AGFGSSMLFGTLVGSLADKQGRKR 103 (416)
Q Consensus 80 ~~~~~~~i~~~~~G~l~Dr~Grr~ 103 (416)
-+.++..+.+.+.|++.||..+++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccc
Confidence 355677788888999999988764
No 318
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=24.17 E-value=1e+02 Score=20.34 Aligned_cols=30 Identities=23% Similarity=0.163 Sum_probs=19.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCCCC
Q 014905 196 GPVAPFDAAACFLAFGMVIILASWTENYGD 225 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 225 (416)
+|...+.+...+.++.+..+-...||+.++
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 566666666666666666665567876654
No 319
>PF03817 MadL: Malonate transporter MadL subunit; InterPro: IPR004690 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=23.52 E-value=3.3e+02 Score=20.53 Aligned_cols=27 Identities=19% Similarity=0.123 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHhhHhhhhhhhCchH
Q 014905 77 LFIAGFGSSMLFGTLVGSLADKQGRKR 103 (416)
Q Consensus 77 i~~~~~~~~~i~~~~~G~l~Dr~Grr~ 103 (416)
+.-...+...+.+...=++.+|+||+.
T Consensus 93 ~Allagi~av~~~~~~ip~lsr~g~~~ 119 (125)
T PF03817_consen 93 VALLAGIGAVAVCFLLIPLLSRIGRKT 119 (125)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 333444455555666667888998764
No 320
>COG1288 Predicted membrane protein [Function unknown]
Probab=23.25 E-value=6.7e+02 Score=24.04 Aligned_cols=21 Identities=10% Similarity=-0.075 Sum_probs=14.8
Q ss_pred CchhHHHHHHHHHHHHHHHHH
Q 014905 196 GPVAPFDAAACFLAFGMVIIL 216 (416)
Q Consensus 196 ~w~~~f~~~~~~~~~~~~~~~ 216 (416)
+||...++......+..+..+
T Consensus 217 ~~Riv~~v~~~~~~i~y~~~Y 237 (481)
T COG1288 217 GLRIVVWVVFTLISIIYVYWY 237 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 899988887776665555444
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.04 E-value=3.2e+02 Score=20.18 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=36.4
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAHSSLRVESYMQIVFIISSASLLIP 329 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 329 (416)
+.|-.++..+-..++.+++.++..|+ .++.+.=.++..++.+...+.
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg--~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDG--VRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcC--cCCChHHHHhHHHHHHhHHhe
Confidence 47888899988889999999999999 777777666666655444433
No 322
>PRK03612 spermidine synthase; Provisional
Probab=20.64 E-value=8.2e+02 Score=24.11 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=20.4
Q ss_pred chHHHHHHHHHHHHHhhHHHHHHhhc
Q 014905 281 PHGFIFATFMLASMLGSSFASRLLAH 306 (416)
Q Consensus 281 ~~g~~~~~~~~~~~~~~~~~~~l~~r 306 (416)
..+.+.+.+..+..+|+.+.+++.++
T Consensus 51 ~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 51 QFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 36777888888888888888887654
No 323
>COG4711 Predicted membrane protein [Function unknown]
Probab=20.09 E-value=5.3e+02 Score=21.64 Aligned_cols=9 Identities=11% Similarity=0.755 Sum_probs=3.8
Q ss_pred HHHHcCCCh
Q 014905 63 LYSTYGFGK 71 (416)
Q Consensus 63 l~~~~~~s~ 71 (416)
.|++++.+.
T Consensus 183 ~f~~~~~~~ 191 (217)
T COG4711 183 IFTRFDFTT 191 (217)
T ss_pred hhhhhhhhH
Confidence 344444433
Done!