BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014910
(416 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/413 (89%), Positives = 395/413 (95%)
Query: 4 QGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSS 63
Q ++ +VQEQVLIRK+IELHDKYM YVT CF NHTLFHKALKEAFEIFCNK V GSSS+
Sbjct: 326 QVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSA 385
Query: 64 ELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR 123
ELLATFCDNILKKGG+EKLSDEAIE+TLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR
Sbjct: 386 ELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR 445
Query: 124 SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLS 183
SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ SFE+YL +N A+PGIDL+
Sbjct: 446 SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLT 505
Query: 184 VTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 243
VTVLTTGFWPSYKS D+NLPSEM+KCVEVFKGFYETKTKHRKLTWIYSLG C+INGKF+Q
Sbjct: 506 VTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQ 565
Query: 244 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPN 303
K IELIVSTYQAA LLLFNT+D+LSY+EI+ QLNL+H+DLVRLLHSLSCAKYKILLKEPN
Sbjct: 566 KAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPN 625
Query: 304 TKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRK 363
TKT+SQ+D FEFNSKFTDRMRRIKIPLPPVDERKK+VEDVDKDRRYAIDAA+VRIMKSRK
Sbjct: 626 TKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRK 685
Query: 364 VLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
VLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA
Sbjct: 686 VLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/414 (72%), Positives = 356/414 (85%), Gaps = 2/414 (0%)
Query: 5 GGSSG-AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSS 63
+SG VQ+QVLIR++I+LHDK+M YV CF H+LFHKALKEAFE+FCNK V G SS+
Sbjct: 329 ASTSGLKVQDQVLIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSA 388
Query: 64 ELLATFCDNILKKGGN-EKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFD 122
E+LAT+CDNILK GG EKL +E +E TLEKVVKLL YISDKDLFAEF+RKK ARRLLFD
Sbjct: 389 EILATYCDNILKTGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFD 448
Query: 123 RSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDL 182
R+ ND HERS+LTK K+ G QFTSKMEGM+TD+TLA+E+QT+F E+LS N+ G+D
Sbjct: 449 RNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDF 508
Query: 183 SVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 242
+VTVLTTGFWPSYK++DLNLP EMV CVE FK +Y TKT R+L+WIYSLG C + GKF+
Sbjct: 509 TVTVLTTGFWPSYKTTDLNLPIEMVNCVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFD 568
Query: 243 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP 302
+K IE++V+TYQAA LLLFN ++RLSY+EI+ QLNL H+DL RLLHSLSC KYKIL+KEP
Sbjct: 569 KKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLSCLKYKILIKEP 628
Query: 303 NTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSR 362
++ IS +D FEFNSKFTD+MRRI++PLPP+DERKKIVEDVDKDRRYAIDAALVRIMKSR
Sbjct: 629 MSRNISNTDTFEFNSKFTDKMRRIRVPLPPMDERKKIVEDVDKDRRYAIDAALVRIMKSR 688
Query: 363 KVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
KVLGHQQLVSECVE LS+MFKPDIK IKKR+EDLI+RDYLERD +NPN F+YLA
Sbjct: 689 KVLGHQQLVSECVEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDNPNTFKYLA 742
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/408 (70%), Positives = 331/408 (81%), Gaps = 24/408 (5%)
Query: 10 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATF 69
A QVL+RK IELHDKYM YV CF H+LFHK LKEAFE+FCNK V G+SS+E+LAT+
Sbjct: 337 ASASQVLVRKEIELHDKYMVYVDECFQKHSLFHKLLKEAFEVFCNKTVAGASSAEILATY 396
Query: 70 CDNILK-KGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDD 128
CDNILK +GG+EKLSDEA E TLEKVV LL YISDKDLFAEFYRKK ARRLLFDRS
Sbjct: 397 CDNILKTRGGSEKLSDEATEITLEKVVNLLVYISDKDLFAEFYRKKQARRLLFDRSG--- 453
Query: 129 HERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLT 188
+ VTD+TLARE QT+F +YLS N GID +VTVLT
Sbjct: 454 --------------------IMKEVTDITLARELQTNFVDYLSANMTTKLGIDFTVTVLT 493
Query: 189 TGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIEL 248
TGFWPSYK++DLNLP+EMV CVE FK FY TKT R+L+WIYSLG C+I GKFE+K +EL
Sbjct: 494 TGFWPSYKTTDLNLPTEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMEL 553
Query: 249 IVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTIS 308
+VSTYQAA LLLFN ++RLSY+EI QLNL+H+DLVRLLHSLSC KYKIL+KEP ++TIS
Sbjct: 554 VVSTYQAAVLLLFNNAERLSYTEISEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTIS 613
Query: 309 QSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQ 368
++D FEFNSKFTD+MR+I++PLPP+DERKK+VEDVDKDRRYAIDAALVRIMKSRKVL HQ
Sbjct: 614 KTDTFEFNSKFTDKMRKIRVPLPPMDERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQ 673
Query: 369 QLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
QLVSECVE LS+MFKPDIK IKKR+EDLI RDYLERD EN N F+Y+A
Sbjct: 674 QLVSECVEHLSKMFKPDIKMIKKRIEDLINRDYLERDTENANTFKYVA 721
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 252/409 (61%), Gaps = 10/409 (2%)
Query: 12 QEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCD 71
+++ +++++++ DK + CF+ + F A+KEAFE F NK + +EL+A + D
Sbjct: 568 KDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFINKR--PNKPAELIAKYVD 625
Query: 72 NILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 131
+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K LA+RLL +SA+ D E+
Sbjct: 626 SKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEK 684
Query: 132 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGF 191
S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ NQN I+L+V +LT G+
Sbjct: 685 SMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYM-QNQNVPGNIELTVNILTMGY 743
Query: 192 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVS 251
WP+Y +++LP EMVK E+FK FY K RKL W +LG C + +F++ EL VS
Sbjct: 744 WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS 803
Query: 252 TYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSD 311
+Q LL+FN + S EI + +L R L SL+C K ++L K P K I D
Sbjct: 804 LFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGD 863
Query: 312 HFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGH 367
F N F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK L H
Sbjct: 864 KFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH 923
Query: 368 QQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
LVSE QL KP +KKR+E LI RDY+ERDKENPN + Y+A
Sbjct: 924 NLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 970
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/409 (41%), Positives = 252/409 (61%), Gaps = 10/409 (2%)
Query: 12 QEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCD 71
+++ +++++++ DK + CF+ + F A+KEAFE F NK + +EL+A + D
Sbjct: 511 KDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINKR--PNKPAELIAKYVD 568
Query: 72 NILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 131
+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K LA+RLL +SA+ D E+
Sbjct: 569 SKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEK 627
Query: 132 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGF 191
S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ NQN I+L+V +LT G+
Sbjct: 628 SMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYM-QNQNVPGNIELTVNILTMGY 686
Query: 192 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVS 251
WP+Y +++LP EMVK E+FK FY K RKL W +LG C + +F++ EL VS
Sbjct: 687 WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS 746
Query: 252 TYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSD 311
+Q LL+FN + S EI + +L R L SL+C K ++L K P K I D
Sbjct: 747 LFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGD 806
Query: 312 HFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGH 367
F N F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK L H
Sbjct: 807 KFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH 866
Query: 368 QQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
LVSE QL KP +KKR+E LI RDY+ERDKENPN + Y+A
Sbjct: 867 NLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 913
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 248/405 (61%), Gaps = 10/405 (2%)
Query: 16 LIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK 75
+++ +++ DK + CF + F +KE+FE F NK + +EL+A D+ L+
Sbjct: 361 MVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINKR--PNKPAELIAKHVDSKLR 418
Query: 76 KGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 135
GN++ +DE +E TL+K++ L +I KD+F FY+K LA+RLL +SA+ D E+S+L+
Sbjct: 419 -AGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLS 477
Query: 136 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSY 195
KLK +CG FTSK+EGM D+ L+++ F++++ N ++ P IDL+V +LT G+WP+Y
Sbjct: 478 KLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSDSGP-IDLTVNILTMGYWPTY 536
Query: 196 KSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQA 255
+++L EM+K EVFK FY K RKL W +LG + +F++ E VS +Q
Sbjct: 537 TPMEVHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQT 596
Query: 256 ATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEF 315
LL+FN D S+ EI + +L R L SL+C K ++L+K P K + D F F
Sbjct: 597 LVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIF 656
Query: 316 NSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLV 371
N +F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK LGH LV
Sbjct: 657 NGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLV 716
Query: 372 SECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
SE QL KP +KKR+E LI RDY+ERDK+NPN + Y+A
Sbjct: 717 SELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQYHYVA 759
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 312 bits (799), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 247/405 (60%), Gaps = 10/405 (2%)
Query: 16 LIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK 75
+++ +++ DK V CF + F +KE+FE F NK + +EL+A D+ L+
Sbjct: 361 MVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKR--PNKPAELIAKHVDSKLR 418
Query: 76 KGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 135
GN++ +DE +E L+K++ L +I KD+F FY+K LA+RLL +SA+ D E+S+L+
Sbjct: 419 -AGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLS 477
Query: 136 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSY 195
KLK +CG FTSK+EGM D+ L+++ F++++ NQ+A IDL+V +LT G+WP+Y
Sbjct: 478 KLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHM-QNQSAPGPIDLTVNILTMGYWPTY 536
Query: 196 KSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQA 255
+++LP EMV+ EVFK FY K RKL W +LG + F++ E VS +Q
Sbjct: 537 TPMEVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQT 596
Query: 256 ATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEF 315
LL+FN D S+ EI + +L R L SL+C K ++L+K P K + D F F
Sbjct: 597 LVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIF 656
Query: 316 NSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLV 371
N+ F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK LGH LV
Sbjct: 657 NADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLV 716
Query: 372 SECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
SE QL KP +KKR+E LI RDY+ERDK++PN + Y+A
Sbjct: 717 SELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQYHYVA 759
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 288 bits (738), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 256/438 (58%), Gaps = 45/438 (10%)
Query: 18 RKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKG 77
+ +++L DKY + N N F ++++AFE F N S E ++ F D LKKG
Sbjct: 338 QSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYFIN---LNPKSPEYISLFIDEKLKKG 394
Query: 78 GNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKL 137
+ +S+E ++ L+K++ L I +KD+F ++Y++ LA+RLL RS +DD ER+++ KL
Sbjct: 395 L-KGVSEEEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKL 453
Query: 138 KQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKS 197
K +CG QFTSK+EGM TD+ L+++ + F+ Y+ N + A P IDL+V VLTTGFWP+ +
Sbjct: 454 KTECGYQFTSKLEGMFTDMRLSQDTMSGFKTYIQNLKKALP-IDLNVHVLTTGFWPTQNT 512
Query: 198 SDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAAT 257
++ NLP E++ C E FK +Y + R L W ++G I F K+ EL VS+YQ
Sbjct: 513 ANCNLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVI 572
Query: 258 LLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKE---------------- 301
LLLFN +L++ EI Q + DL R L +L+ K KIL +E
Sbjct: 573 LLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTTTTTTAT 632
Query: 302 ------------------PNTKTISQSDHFEFNSKFTDRMRRIKIPL-----PPVDERKK 338
+K+I +SD F FN+KF ++ R+K+ PV+E K+
Sbjct: 633 SSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEE-KE 691
Query: 339 IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 398
+ VD+DR++ I+A++VRIMK+RK L H LVSE ++QL F P+ +KKR+E LI
Sbjct: 692 TRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIE 751
Query: 399 RDYLERDKENPNMFRYLA 416
R+YLER K++ ++ Y+A
Sbjct: 752 REYLERSKQDRKIYNYMA 769
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 235/386 (60%), Gaps = 9/386 (2%)
Query: 35 FINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKV 94
F + F +K++FE N + + +EL+A F D L+ GN+ S+E +E LEKV
Sbjct: 412 FYKNESFGNTIKDSFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELESVLEKV 468
Query: 95 VKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVT 154
+ L +I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG QFT+K+EGM
Sbjct: 469 LVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFK 528
Query: 155 DLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFK 214
D+ L++E SF++ GI++SV VLTTG+WP+Y D+ LP E+ ++FK
Sbjct: 529 DIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFK 588
Query: 215 GFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMT 274
FY +K R+L W SLG C + F + EL VS +QA L+LFN + +LS+ +I
Sbjct: 589 EFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKD 648
Query: 275 QLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL---- 330
++ +L R L SL+C K ++L K P + + D FEFN +F + RIK+
Sbjct: 649 STSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMK 708
Query: 331 PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 390
V+E E V +DR+Y IDAA+VRIMK+RKVL H L++E +QL KP +K
Sbjct: 709 ETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLK 766
Query: 391 KRMEDLITRDYLERDKENPNMFRYLA 416
KR+E LI R+YLER+K NP ++ YLA
Sbjct: 767 KRIESLIDREYLEREKSNPQIYNYLA 792
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 278 bits (710), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 242/412 (58%), Gaps = 22/412 (5%)
Query: 16 LIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK 75
++++++ DKY + + F N F AL +FE F N + S E ++ F D+ L+
Sbjct: 332 FVQRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFINL---NARSPEFISLFVDDKLR 388
Query: 76 KGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 135
KG + ++D +E L+KV+ L Y+ +KD+F ++Y++ LA+RLL ++ +DD ERS++
Sbjct: 389 KGL-KGITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIV 447
Query: 136 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP----GIDLSVTVLTTGF 191
KLK +CG QFTSK+EGM TD+ + + F +HP G L V VLTTG
Sbjct: 448 KLKTECGYQFTSKLEGMFTDMKTSEDTMRGF-------YGSHPELSEGPTLIVQVLTTGS 500
Query: 192 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ-KNIELIV 250
WP+ + NLP+E+ E F+ +Y R+L+W ++G +I F + + EL V
Sbjct: 501 WPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNV 560
Query: 251 STYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK-ILLKEPNTKTISQ 309
ST+Q L+LFN SDRLSY EI + DL R L SL+C K K ++ KEP +K I +
Sbjct: 561 STFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGE 620
Query: 310 SDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVRIMKSRKV 364
D F N KFT + ++KI E+++ + V++DR+ I+AA+VRIMKSRK+
Sbjct: 621 EDLFVVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKI 680
Query: 365 LGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
L H +++E +QL F + IKKR+E LI RD+LERD + ++RYLA
Sbjct: 681 LDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 732
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 274 bits (701), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 242/412 (58%), Gaps = 22/412 (5%)
Query: 16 LIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK 75
++++++ DKY + F N F AL +FE F N + S E ++ F D+ L+
Sbjct: 332 FVQRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFVNL---NTRSPEFISLFVDDKLR 388
Query: 76 KGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 135
KG + + +E ++ L+KV+ L Y+ +KD+F ++Y++ LA+RLL ++ +DD ER+++
Sbjct: 389 KGL-KGVGEEDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIV 447
Query: 136 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP----GIDLSVTVLTTGF 191
KLK +CG QFTSK+EGM TD+ + + F N+HP G L V VLTTG
Sbjct: 448 KLKTECGYQFTSKLEGMFTDMKTSHDTLLGF-------YNSHPELSEGPTLVVQVLTTGS 500
Query: 192 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ-KNIELIV 250
WP+ + NLP+E+ E F+ +Y R+L+W ++G +I F + + EL V
Sbjct: 501 WPTQPTIQCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNV 560
Query: 251 STYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK-ILLKEPNTKTISQ 309
ST+Q L+LFN SDRLSY EI + DL R L S++C K K +L KEP +K I++
Sbjct: 561 STFQMCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAE 620
Query: 310 SDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVRIMKSRKV 364
D F N +F + ++KI E+++ + V++DR+ I+AA+VRIMKSR+V
Sbjct: 621 EDWFVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRV 680
Query: 365 LGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
L H +++E +QL F + IKKR+E LI RD+LERD + ++RYLA
Sbjct: 681 LDHNNIIAEVTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 732
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 245/432 (56%), Gaps = 37/432 (8%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKK 76
I+ +++L ++ ++ F N LF + + FE F N S S E L+ F D+ LKK
Sbjct: 342 IQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKK 398
Query: 77 GGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 136
G + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++K
Sbjct: 399 GV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISK 457
Query: 137 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK 196
LK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+
Sbjct: 458 LKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQS 517
Query: 197 SSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-------------- 241
++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 518 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 242 ---------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
+K+I L VST+Q L+LFN D+ ++ EI + ++ +LVR L SL+C
Sbjct: 578 GGAQVTGSNTRKHI-LQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLAC 636
Query: 293 AK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPV------DERKKIVEDVD 344
K ++L KEP +K I F N +FT ++ R+KI ERK+ + VD
Sbjct: 637 GKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD 696
Query: 345 KDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 404
DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R
Sbjct: 697 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR 756
Query: 405 DKENPNMFRYLA 416
E+ ++ Y+A
Sbjct: 757 TPEDRKVYTYVA 768
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 245/432 (56%), Gaps = 37/432 (8%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKK 76
I+ +++L ++ ++ F N LF + + FE F N S S E L+ F D+ LKK
Sbjct: 342 IQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKK 398
Query: 77 GGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 136
G + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++K
Sbjct: 399 GV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISK 457
Query: 137 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK 196
LK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+
Sbjct: 458 LKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQS 517
Query: 197 SSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-------------- 241
++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 518 ATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGV 577
Query: 242 ---------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
+K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C
Sbjct: 578 GGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC 636
Query: 293 AK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPV------DERKKIVEDVD 344
K ++L KEP +K I F N +FT ++ R+KI ERK+ + VD
Sbjct: 637 GKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD 696
Query: 345 KDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 404
DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R
Sbjct: 697 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR 756
Query: 405 DKENPNMFRYLA 416
E+ ++ Y+A
Sbjct: 757 TPEDRKVYTYVA 768
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 245/432 (56%), Gaps = 37/432 (8%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKK 76
I+ +++L ++ ++ F N LF + + FE F N S S E L+ F D+ LKK
Sbjct: 342 IQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKK 398
Query: 77 GGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 136
G + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++K
Sbjct: 399 GV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISK 457
Query: 137 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK 196
LK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+
Sbjct: 458 LKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQS 517
Query: 197 SSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-------------- 241
++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 518 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 242 ---------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
+K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C
Sbjct: 578 GGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC 636
Query: 293 AK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPV------DERKKIVEDVD 344
K ++L KEP +K I F N +FT ++ R+KI ERK+ + VD
Sbjct: 637 GKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD 696
Query: 345 KDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 404
DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R
Sbjct: 697 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR 756
Query: 405 DKENPNMFRYLA 416
E+ ++ Y+A
Sbjct: 757 TPEDRKVYTYVA 768
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 245/432 (56%), Gaps = 37/432 (8%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKK 76
I+ +++L ++ ++ F N LF + + FE F N S S E L+ F D+ LKK
Sbjct: 342 IQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKK 398
Query: 77 GGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 136
G + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++K
Sbjct: 399 GV-KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISK 457
Query: 137 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK 196
LK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+
Sbjct: 458 LKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQS 517
Query: 197 SSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-------------- 241
++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 518 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 242 ---------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
+K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C
Sbjct: 578 GGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC 636
Query: 293 AK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPV------DERKKIVEDVD 344
K ++L KEP +K I F N +FT ++ R+KI ERK+ + VD
Sbjct: 637 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD 696
Query: 345 KDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 404
DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R
Sbjct: 697 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR 756
Query: 405 DKENPNMFRYLA 416
E+ ++ Y+A
Sbjct: 757 TPEDRKVYTYVA 768
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 245/432 (56%), Gaps = 37/432 (8%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKK 76
I+ +++L ++ ++ F N LF + + FE F N S S E L+ F D+ LKK
Sbjct: 342 IQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKK 398
Query: 77 GGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 136
G + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++K
Sbjct: 399 GV-KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISK 457
Query: 137 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK 196
LK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+
Sbjct: 458 LKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQS 517
Query: 197 SSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-------------- 241
++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 518 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 242 ---------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
+K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C
Sbjct: 578 GGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC 636
Query: 293 AK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPV------DERKKIVEDVD 344
K ++L KEP +K I F N +FT ++ R+KI ERK+ + VD
Sbjct: 637 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD 696
Query: 345 KDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 404
DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R
Sbjct: 697 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR 756
Query: 405 DKENPNMFRYLA 416
E+ ++ Y+A
Sbjct: 757 TPEDRKVYTYVA 768
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 265 bits (678), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 245/432 (56%), Gaps = 37/432 (8%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKK 76
I+ +++L ++ ++ F N LF + + FE F N S S E L+ F D+ LKK
Sbjct: 342 IQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKK 398
Query: 77 GGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTK 136
G + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++K
Sbjct: 399 GV-KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISK 457
Query: 137 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK 196
LK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+
Sbjct: 458 LKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQS 517
Query: 197 SSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-------------- 241
++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 518 ATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 242 ---------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
+K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C
Sbjct: 578 GGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC 636
Query: 293 AK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPV------DERKKIVEDVD 344
K ++L KEP +K I F N +FT ++ R+KI ERK+ + VD
Sbjct: 637 GKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD 696
Query: 345 KDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 404
DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL R
Sbjct: 697 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR 756
Query: 405 DKENPNMFRYLA 416
E+ ++ Y+A
Sbjct: 757 TPEDRKVYTYVA 768
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 261 bits (667), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 241/424 (56%), Gaps = 21/424 (4%)
Query: 7 SSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELL 66
SS A + ++K++ L D+ ++ +L +AF F + G + + E +
Sbjct: 369 SSNATMATLWVQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTFVD---GYTRAPEYI 425
Query: 67 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 126
+ F D+ LKK + + + +IE TL+ V L +IS+KD+F ++Y+ LA+RLL +RS +
Sbjct: 426 SLFIDDNLKKDARKAI-EGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKRLLNNRSIS 484
Query: 127 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNN--QNAHPGIDLSV 184
D E ++++LKQ+ G FT K+EGM D+ L++E +EY N+ Q+A P +DL+V
Sbjct: 485 SDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQE---LLQEYKHNSALQSAKPALDLNV 541
Query: 185 TVLTTGFWP---SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF 241
++L + FWP S N P ++ ++ F FY +K RKL W S+G ++ F
Sbjct: 542 SILASTFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNF 601
Query: 242 EQKNIELIVSTYQAATLLLFN---TSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKIL 298
+ + +L VST + LLLF + L + EI+ + N+ DL R L SL+CAKYKIL
Sbjct: 602 KDRKYDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYKIL 661
Query: 299 LKEPNTKTISQSDHFEFNSKFTDRMRRIKIP------LPPVDERKKIVEDVDKDRRYAID 352
LK+P + ++ D F FN F + RIKI + ERK+ +E VD+ R++ D
Sbjct: 662 LKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQAD 721
Query: 353 AALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMF 412
A +VR+MK RKV H QL++E QL+ F P IK+R+E LI R+YL+R +N ++
Sbjct: 722 ACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIY 781
Query: 413 RYLA 416
YLA
Sbjct: 782 EYLA 785
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 238 bits (607), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 241/427 (56%), Gaps = 22/427 (5%)
Query: 6 GSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGG 59
G + ++ ++ ++++H KY V + F N F AL +A F N A
Sbjct: 356 GEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS 415
Query: 60 SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARR 118
S S ELLA +CD++LKK K +EA +E+TL +V+ + YI DKD+F +FY K LA+R
Sbjct: 416 SKSPELLARYCDSLLKKSS--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKR 473
Query: 119 LLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP 178
L+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++ F+++L+N++
Sbjct: 474 LVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPL-- 531
Query: 179 GIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN 238
+D S+ VL++G WP +S LPSE+ + + F FY ++ RKLTW+Y L + +
Sbjct: 532 DLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELV 591
Query: 239 GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKIL 298
+ L ST+Q A LL +NT D + ++ + D L ++L L K K+L
Sbjct: 592 TNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLL 649
Query: 299 LKEPNTKTISQSD-----HFEFNSKFTDRMRRIKIPLPPVDERKKIVE----DVDKDRRY 349
+ E + + + + + ++ R+ I +P E+K+ E ++++DR+
Sbjct: 650 VLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKL 709
Query: 350 AIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENP 409
I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI ++YLER
Sbjct: 710 LIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEK 769
Query: 410 NMFRYLA 416
+ + YLA
Sbjct: 770 DTYSYLA 776
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 238 bits (607), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 241/427 (56%), Gaps = 22/427 (5%)
Query: 6 GSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGG 59
G + ++ ++ ++++H KY V + F N F AL +A F N A
Sbjct: 356 GEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS 415
Query: 60 SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARR 118
S S ELLA +CD++LKK K +EA +E+TL +V+ + YI DKD+F +FY K LA+R
Sbjct: 416 SKSPELLARYCDSLLKKSS--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKR 473
Query: 119 LLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP 178
L+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++ F+++L+N++
Sbjct: 474 LVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPL-- 531
Query: 179 GIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN 238
+D S+ VL++G WP +S LPSE+ + + F FY ++ RKLTW+Y L + +
Sbjct: 532 DLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELV 591
Query: 239 GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKIL 298
+ L ST+Q A LL +NT D + ++ + D L ++L L K K+L
Sbjct: 592 TNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLL 649
Query: 299 LKEPNTKTISQSD-----HFEFNSKFTDRMRRIKIPLPPVDERKKIVE----DVDKDRRY 349
+ E + + + + + ++ R+ I +P E+K+ E ++++DR+
Sbjct: 650 VLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKL 709
Query: 350 AIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENP 409
I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI ++YLER
Sbjct: 710 LIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEK 769
Query: 410 NMFRYLA 416
+ + YLA
Sbjct: 770 DTYSYLA 776
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 238 bits (607), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 241/427 (56%), Gaps = 22/427 (5%)
Query: 6 GSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGG 59
G + ++ ++ ++++H KY V + F N F AL +A F N A
Sbjct: 356 GEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSS 415
Query: 60 SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARR 118
S S ELLA +CD++LKK K +EA +E+TL +V+ + YI DKD+F +FY K LA+R
Sbjct: 416 SKSPELLARYCDSLLKKSS--KNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKR 473
Query: 119 LLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP 178
L+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++ F+++L+N++
Sbjct: 474 LVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPL-- 531
Query: 179 GIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN 238
+D S+ VL++G WP +S LPSE+ + + F FY ++ RKLTW+Y L + +
Sbjct: 532 DLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYQLSKGELV 591
Query: 239 GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKIL 298
+ L ST+Q A LL +NT D + ++ + D L ++L L K K+L
Sbjct: 592 TNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQIL--LKSKLL 649
Query: 299 LKEPNTKTISQSD-----HFEFNSKFTDRMRRIKIPLPPVDERKKIVE----DVDKDRRY 349
+ E + + + + + ++ R+ I +P E+K+ E ++++DR+
Sbjct: 650 VLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKL 709
Query: 350 AIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENP 409
I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI ++YLER
Sbjct: 710 LIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEK 769
Query: 410 NMFRYLA 416
+ + YLA
Sbjct: 770 DTYSYLA 776
>sp|Q54CS2|CUL4_DICDI Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1
Length = 802
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 237/444 (53%), Gaps = 46/444 (10%)
Query: 12 QEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCD 71
+E LI+ +++ D+ ++ F + L ALKE+FE F N + +EL+A F D
Sbjct: 366 KEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFIN--TKQNKPAELVARFID 423
Query: 72 NILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 131
+ LK GG +++S+E +E L K + L YI KD+F FY++ L++RLL D+S + D E+
Sbjct: 424 SKLKVGG-KRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEK 482
Query: 132 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGF 191
S+++KLK +CG FT+K+E M D+ L+ + SF + S I++++ VLT+G
Sbjct: 483 SMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFRD--SPMTQNFKSIEMNIYVLTSGN 540
Query: 192 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVS 251
WP + LP E ++ EVF FY +K + L W +L C + F Q EL VS
Sbjct: 541 WPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVS 600
Query: 252 TYQAATLLLFN---TSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP------ 302
+Q L LFN LS+ +I L +L + L SL +K IL+++
Sbjct: 601 LFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSN 660
Query: 303 --------------------------NTKTISQSDHFEFNSKFTDRMRRIKIP----LPP 332
TK I ++D F FNSKF+ ++ +IK+
Sbjct: 661 TSSNTSSNTSSSASGSASGGASGGATKTKVIDETDTFLFNSKFSSKLFKIKVNSIQIQET 720
Query: 333 VDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKR 392
V+E +K E++ DR+Y +DAA+VRIMK+RK L H L+SE V L F+P +KKR
Sbjct: 721 VEENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLK--FQPKPVDLKKR 778
Query: 393 MEDLITRDYLERDKENPNMFRYLA 416
+E LI ++YL RD EN ++ Y+A
Sbjct: 779 IEILIEKEYLCRDPENAMIYNYMA 802
>sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1
Length = 770
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 238/427 (55%), Gaps = 19/427 (4%)
Query: 6 GSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGG 59
++G ++ +V I ++++ KY E VT F + T F +L +A F N+ A
Sbjct: 347 ATNGVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSS 406
Query: 60 SSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRL 119
S S ELLA F D +LKK N E +E+ L V+ + YI DKD+F +FY K LA+RL
Sbjct: 407 SKSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRL 465
Query: 120 LFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPG 179
+ S ++D E +++ KLK CG ++TSK++ M TD++L+RE F ++ + +
Sbjct: 466 IHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHIEQVERSSLN 525
Query: 180 IDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN 238
ID SV VL TG WP S++ ++P E+ C ++F+ FY+ + RKL W++ L + +
Sbjct: 526 IDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGELK 585
Query: 239 GKFEQKN---IELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 295
K+ Q + L STYQ LL FN + L+ EI L L L SL AK
Sbjct: 586 TKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSL--AKS 643
Query: 296 KILLKEP--NTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKK----IVEDVDKDRRY 349
KILL +P + + I+++ F N +F ++ +I I +P + + K+ I + V++DR+
Sbjct: 644 KILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKTVEEDRKL 703
Query: 350 AIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENP 409
I AA+VRIMK RK L H L++E + QL F P + IKK ++ LI ++YL R +
Sbjct: 704 QIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKK 763
Query: 410 NMFRYLA 416
+ + Y+A
Sbjct: 764 DHYSYVA 770
>sp|O14122|CUL4_SCHPO Cullin-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul4 PE=1 SV=1
Length = 734
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 235/415 (56%), Gaps = 17/415 (4%)
Query: 12 QEQVLIRKIIELHDKYMEYVTN-CFINHTLFHKALKEAFEIFCNKAVGGS--SSSELLAT 68
++ L+++++ H K+++ V + F++ A+++AFE F N A G + + L+A
Sbjct: 327 KDDTLVQELLSFH-KFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAK 385
Query: 69 FCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDD 128
+ D +L+ G + + ++E +++ L YI+ KD+F +Y+ +A+RLL ++SA+
Sbjct: 386 YIDYLLR-VGEQASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQ 444
Query: 129 HERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLT 188
+E +L LK+ CG QFT +EGM D+ +++E +SF + N H DL V VL+
Sbjct: 445 NELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFR-HSKAAHNLHR--DLYVNVLS 501
Query: 189 TGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIEL 248
+WPSY S + LP +M + ++ F+ FY +K +K++W SLG C + +F N EL
Sbjct: 502 QAYWPSYPESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKEL 561
Query: 249 IVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTK 305
+S +QA LL FN + +SY ++ L+ DL R L SLSCA+ + L+ P +K
Sbjct: 562 SISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSK 621
Query: 306 TISQSDHFEFNSKFTDRMRRIKIPLPPVDERKK----IVEDVDKDRRYAIDAALVRIMKS 361
S F N KFTD++ R+KI + E ++ + E V +DR++ + A++VR+MK
Sbjct: 622 KPSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQ 681
Query: 362 RKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
++ + H LV + + P + +K +E L+ ++YLER E+ +++ Y+
Sbjct: 682 KEKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLER--EDNDIYTYVT 734
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 232/424 (54%), Gaps = 20/424 (4%)
Query: 7 SSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAV-----GGSS 61
+ A + ++ I+++H KY V F N F AL +A F N V S
Sbjct: 357 TDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKFINSNVVTIANSASK 416
Query: 62 SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLF 121
S ELLA +CD +LKK D+ +E+ L +V+ + YI DKD+F ++Y K LA+RL+
Sbjct: 417 SPELLAKYCDLLLKKSSKNP-EDKELEDNLNQVMVVFKYIEDKDVFQKYYSKMLAKRLVN 475
Query: 122 DRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGID 181
SA+DD E +++KLKQ CG ++T K++ M D+ ++++ + F++YL+ +N ID
Sbjct: 476 HTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLNSYFKQYLA-EKNLTMEID 534
Query: 182 LSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL--GQCNIN- 238
+ VL++G WP S++ LPSE+ + V F FY + RKL W+Y + G+ +N
Sbjct: 535 FGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNV 594
Query: 239 GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLN--LTHDDLVRLLHSLSCAKYK 296
+ L ST+Q + LL FN D+LS++ Q N ++L+++L L K K
Sbjct: 595 NRNNSSTYTLQASTFQMSVLLQFN--DQLSFTVQQLQDNTQTQQENLIQVLQIL--LKAK 650
Query: 297 ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDK----DRRYAID 352
+L N +++ E + ++ RRI I P E K E V K DR+ I
Sbjct: 651 VLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEEDRKLLIQ 710
Query: 353 AALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMF 412
AA+VRIMK RK L H L+SE + QLS FKP + IKK ++ LI ++YLER + + + +
Sbjct: 711 AAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTY 770
Query: 413 RYLA 416
YLA
Sbjct: 771 SYLA 774
>sp|Q17391|CUL3_CAEEL Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2
Length = 777
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 234/442 (52%), Gaps = 52/442 (11%)
Query: 16 LIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK 75
+ ++++L D + +T F + F + FE F N S E +A + D++L+
Sbjct: 347 FVNELLQLKDYFSSLLTTAFADDRDFKNRFQHDFETFLN---SNRQSPEFVALYMDDMLR 403
Query: 76 KGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 135
G + +SD ++ L+ V+ L Y+ +KD+F +++++ LA+RLL D+S +DD E+++L
Sbjct: 404 -SGLKCVSDAEMDNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLA 462
Query: 136 KLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP---GIDLSVTVLTTGFW 192
KLK +CG QFT K+E M D L TSF ++ + A P ID+S+ VLT G W
Sbjct: 463 KLKTECGCQFTQKLENMFRDKELWLTLATSFRDW----REAQPTKMSIDISLRVLTAGVW 518
Query: 193 PSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF----------- 241
P+ + + + LP E+ E+F +Y K RKLT LG ++ F
Sbjct: 519 PTVQCNPVVLPQELSVAYEMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNE 578
Query: 242 -------------EQKNIE---LIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 285
+++ E L V+T+Q LL FN +R+S ++M +L + +L R
Sbjct: 579 ENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKR 638
Query: 286 LLHSLSCAKY--KILLKEPNTK-TISQSDHFEFNSKFTDRMRRIKIPL--------PPVD 334
L SL+ K +IL+++ K I SD F N F ++ R+K+ + P +
Sbjct: 639 NLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIR 698
Query: 335 ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 394
E ++ VED DR+ ++AA+VRIMK+RK L H LV+E +QL F P IK+R+E
Sbjct: 699 ETRQKVED---DRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIE 755
Query: 395 DLITRDYLERDKENPNMFRYLA 416
LI R+YL RD+ + ++Y+A
Sbjct: 756 TLIEREYLARDEHDHRAYQYIA 777
>sp|Q9D4H8|CUL2_MOUSE Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2
Length = 745
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 218/423 (51%), Gaps = 15/423 (3%)
Query: 6 GSSGAVQEQ---VLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS-- 60
+S QE + + ++E+H K+++ + F AL +A N S
Sbjct: 326 ATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVC 385
Query: 61 SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLL 120
+ ELLA +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+
Sbjct: 386 KAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLI 444
Query: 121 FDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA-HPG 179
S + D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N G
Sbjct: 445 HGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLG 504
Query: 180 IDLSVTVLTTGFWP--SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNI 237
I + VL G WP SS +P E+ K V++F+ FY RKLTW++ L +
Sbjct: 505 ISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEV 564
Query: 238 NGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKI 297
+ K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K+
Sbjct: 565 KMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKM 622
Query: 298 LLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDA 353
+ + + I F N F+ + + KI + + +E VD+DR+ + A
Sbjct: 623 INHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQA 682
Query: 354 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 413
A+VRIMK+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + +
Sbjct: 683 AIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYS 742
Query: 414 YLA 416
Y+A
Sbjct: 743 YVA 745
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 219 bits (558), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 233/425 (54%), Gaps = 21/425 (4%)
Query: 9 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK-AVGG-------- 59
A ++ ++ ++E+H++Y V F N F ++L +A F N AV
Sbjct: 360 AATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQL 419
Query: 60 SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARR 118
+ S+ELLA +CD +L+K K+ DEA +EE K++ + YI DKD+F++FY K ++R
Sbjct: 420 TKSAELLARYCDQLLRKSS--KMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKR 477
Query: 119 LLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP 178
L+ + SA+D+ E + +TKLK CG ++T+++ MV D ++++ F+E ++
Sbjct: 478 LISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKAD-MLGQK 536
Query: 179 GIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN 238
++ +V VL++G WP++ ++ + LP ++ K +E+F FY K R+LTW+YS + I
Sbjct: 537 SVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEIT 596
Query: 239 GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDD----LVRLLHSLSCAK 294
K +T Q T+LLFN D + +I + + L+ +L
Sbjct: 597 STAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKA 656
Query: 295 YKILLKE---PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAI 351
L KE P T T+S + + N K + + + V + + + ++V++DR+ I
Sbjct: 657 DTELQKEDEVPMTATVSLNKAY-MNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVI 715
Query: 352 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 411
A +VRIMK+RK + HQQL++E + QLS FKP ++ IK+ + LI ++Y+ R + ++
Sbjct: 716 SACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDL 775
Query: 412 FRYLA 416
+ YLA
Sbjct: 776 YEYLA 780
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 211 bits (538), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 231/428 (53%), Gaps = 20/428 (4%)
Query: 1 MLMQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAV--- 57
++ Q G V + + ++ + E V F T F K+L AF N+ V
Sbjct: 348 IVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELVNRNVVCQ 407
Query: 58 -GGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLA 116
S S ELLA + D+IL+K N+ + + +E+ L ++ + Y+ DKD+F FY K LA
Sbjct: 408 RSSSRSPELLAKYADSILRKS-NKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLA 466
Query: 117 RRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 176
+RL+ S + D E S+L+KLK+ CG ++TSK++ M D++L++E +F + Q+
Sbjct: 467 KRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQL---PQSR 523
Query: 177 HPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 235
ID S VL T FWP S + + +LP E+V E F+ +Y + RKL+W++ L +
Sbjct: 524 AGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKG 583
Query: 236 NINGKFE-QKNIELI--VSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 292
I + Q N+ + VSTYQ LLL+N D +Y E+ L+ D L +L+
Sbjct: 584 EIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIF-- 641
Query: 293 AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKK----IVEDVDKDRR 348
K K+LL N K + ++ N F + R+++ LP E+K+ + +++DR+
Sbjct: 642 LKAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQKQESLETHKTIEEDRK 701
Query: 349 YAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKEN 408
+ +A+VRIMK+R+ L H LV E ++Q+ F P + IK+ ++ LI ++YLER +
Sbjct: 702 LLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLER--QG 759
Query: 409 PNMFRYLA 416
+ + YLA
Sbjct: 760 RDEYIYLA 767
>sp|Q5RCF3|CUL2_PONAB Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1
Length = 745
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 217/423 (51%), Gaps = 15/423 (3%)
Query: 6 GSSGAVQEQ---VLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS-- 60
+S QE + + ++E+H K+++ + F AL +A N S
Sbjct: 326 ATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVC 385
Query: 61 SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLL 120
+ ELLA +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+
Sbjct: 386 KAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLI 444
Query: 121 FDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE-NQTSFEEYLSNNQNAHPG 179
S + D E +++ KLKQ CG +FTSK+ M TD++++ + N + + G
Sbjct: 445 HGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLG 504
Query: 180 IDLSVTVLTTGFWP--SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNI 237
I + VL G WP SS +P E+ K V++F+ FY RKLTW++ L +
Sbjct: 505 ISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEV 564
Query: 238 NGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKI 297
+ K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K+
Sbjct: 565 KMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKM 622
Query: 298 LLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDA 353
+ + + I F N F+ + + KI + + +E VD+DR+ + A
Sbjct: 623 INHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQA 682
Query: 354 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 413
A+VRIMK+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + +
Sbjct: 683 AIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYS 742
Query: 414 YLA 416
Y+A
Sbjct: 743 YVA 745
>sp|Q13617|CUL2_HUMAN Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2
Length = 745
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 217/423 (51%), Gaps = 15/423 (3%)
Query: 6 GSSGAVQEQ---VLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS-- 60
+S QE + + ++E+H K+++ + F AL +A N S
Sbjct: 326 ATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVC 385
Query: 61 SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLL 120
+ ELLA +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+
Sbjct: 386 KAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLI 444
Query: 121 FDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE-NQTSFEEYLSNNQNAHPG 179
S + D E +++ KLKQ CG +FTSK+ M TD++++ + N + + G
Sbjct: 445 HGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLG 504
Query: 180 IDLSVTVLTTGFWP--SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNI 237
I + VL G WP SS +P E+ K V++F+ FY RKLTW++ L +
Sbjct: 505 ISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEV 564
Query: 238 NGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKI 297
+ K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K+
Sbjct: 565 KMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKM 622
Query: 298 LLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDA 353
+ + + I F N F+ + + KI + + +E VD+DR+ + A
Sbjct: 623 INHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQA 682
Query: 354 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 413
A+VRIMK+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + +
Sbjct: 683 AIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYS 742
Query: 414 YLA 416
Y+A
Sbjct: 743 YVA 745
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 233/447 (52%), Gaps = 49/447 (10%)
Query: 14 QVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEA-FEIFCNKAV--GGSSSSELLATFC 70
++ + +++++ ++ + F N F L A +IF + + S ELLA +C
Sbjct: 330 KIYVETLLKIYLQFSSIIKKSFNNDVSFITVLDLACHKIFNQNHITRNTTKSPELLAKYC 389
Query: 71 DNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHE 130
D +LKKG N++ + +EE L +++ L Y+ DKD+F +FY K L+RRL+ S +DD E
Sbjct: 390 DMLLKKG-NKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIE 448
Query: 131 RSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTG 190
+ ++T LKQ CG ++TSK + M D+TL+ E F+ +L N + ID S+ VLT+G
Sbjct: 449 KFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSLSIGKIDFSILVLTSG 508
Query: 191 FWPSY-KSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELI 249
W + ++S +P E+ C+ F+ +Y T+ + RKL W++ L + F +K+ +
Sbjct: 509 SWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQ 568
Query: 250 VSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKI------------ 297
V+ +Q LL+FNT + +S EI NL ++L R L SL AK I
Sbjct: 569 VTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAKILISKKKDQNSINNN 628
Query: 298 ----------------LLKEPNT----KTISQSDHFEFNSKFTDRMRRIKI--------P 329
L+ N + S + + NS ++++ ++K+ P
Sbjct: 629 NNNNNNNNNNGEGNNSLVDSANNMQPSSSSSSTQEYTVNSAYSNKRSKVKVSSSLQKETP 688
Query: 330 LPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 389
L + ++ + +D+DR+ + A++VRIMK+RK + H L+ E +E F+P+I I
Sbjct: 689 L----QNEETYKGIDEDRKLYLQASIVRIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMI 744
Query: 390 KKRMEDLITRDYLERDKENPNMFRYLA 416
KK +E LI ++Y+ R + + + Y A
Sbjct: 745 KKCIEQLIEKEYITRAEGESDRYLYAA 771
>sp|Q17390|CUL2_CAEEL Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=3
Length = 850
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 226/434 (52%), Gaps = 31/434 (7%)
Query: 8 SGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSS---SSE 64
+G Q + ++ +++K+ + T F++ F L +A + N G S +SE
Sbjct: 423 TGENVPQQFVENVLRVYNKFNDMKTAVFMDDGEFSSGLDKALQGVVNSKEPGQSVPKASE 482
Query: 65 LLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 124
LA + D +LKK + LS+ +E L+ + + YI DKD+F +FY K LA RL+ S
Sbjct: 483 RLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTS 541
Query: 125 ANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSV 184
+ D E ++ KLKQ CG +FTSK+ M TD+ L++E +F++++++ + P +
Sbjct: 542 ISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKFVP 601
Query: 185 T---VLTTGFWP--------------SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLT 227
T +L G WP + ++ +LP + ++ F+ FY K RKLT
Sbjct: 602 TQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLT 661
Query: 228 WIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLL 287
W++++ Q ++ + K + YQ A LL F D + +I ++ ++ D L++ +
Sbjct: 662 WLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTI 721
Query: 288 HSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIVED 342
++ + L + + ++ N T + + ++ P V+ E++ +
Sbjct: 722 RTI----LDVTLLTCDDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNKAVEKEQEAVANT 777
Query: 343 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 402
V +DR+Y ++ A+VRIMK+RKVL H LV+E ++Q F PD+ IKK +EDLI + Y+
Sbjct: 778 VSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIKKSIEDLIEKMYI 837
Query: 403 ERDKENPNMFRYLA 416
+R +N + ++YLA
Sbjct: 838 QRTDQN-DEYQYLA 850
>sp|Q17392|CUL4_CAEEL Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3
Length = 840
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 214/391 (54%), Gaps = 25/391 (6%)
Query: 43 KALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYIS 102
+ L +AFE F NK V S+EL++ +L D +++ +++ + L Y+
Sbjct: 458 QCLSDAFESFVNKQV--DRSAELISKHFHTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLR 515
Query: 103 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 162
KD+F +Y++ LA+RL +RSA+ D E+ +L KLK +CG FT K+EGM D+ +
Sbjct: 516 GKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENY 575
Query: 163 QTSFEEYLS--NNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETK 220
F +YL N + A + + V+T +WP+Y + ++N+P EM + ++ FY +
Sbjct: 576 GRLFNQYLEHMNKEKA----NFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDFYRVQ 631
Query: 221 TKHRKLTWIYSLGQCNINGKFEQK-NIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLT 279
+R + W + L I+ F ELI + YQ LLLFN + + +EI+ +
Sbjct: 632 HGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKIL 691
Query: 280 HDDLVRLLHSLSCA--KYKILLK------EPNTKTIS--QSDHFEFNSKFTDRMRRIKIP 329
++V+ + +L K K+L + E T+ +++ F NSKFT++ R++I
Sbjct: 692 EIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRCRVRIA 751
Query: 330 LPPVD----ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPD 385
+ E K++ E+V+ DR+Y IDAA+VRIMK+RK L HQ L++E ++QL F
Sbjct: 752 QVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLR--FPVS 809
Query: 386 IKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
IKKR+E LI R+Y+ RD E + + Y+A
Sbjct: 810 TADIKKRLESLIEREYISRDPEEASSYNYVA 840
>sp|Q54XF7|CUL5_DICDI Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1
Length = 750
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 229/423 (54%), Gaps = 26/423 (6%)
Query: 14 QVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGG-------SSSSELL 66
QVLI +++++ ++ + C+ N T F A+ ++F I N+ S+ +L
Sbjct: 328 QVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKSFSILVNENPASYDPKKKESNIPVVL 387
Query: 67 ATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSA 125
+ FCD IL+KG + +SDEA +E+ L + V L Y+ DKD+F Y+K L++RL+ D SA
Sbjct: 388 SKFCDQILRKGPHH-ISDEAELEKKLTEAVCLFKYLPDKDIFMLNYQKMLSKRLVEDLSA 446
Query: 126 NDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVT 185
++D E ++ KLK G + +K+ M+TD+ L ++ +F+ +L+ P +
Sbjct: 447 SEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQNHLNEKSLTLP-YQFNFY 505
Query: 186 VLTTGFWP---SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 242
VLT G W ++ PSEM+ + F+ FY+ + R LT++Y + +++ +
Sbjct: 506 VLTNGSWTLTNKQTATPFKPPSEMLSSITYFESFYKKSYQGRVLTFLYDFSRADVDSRQA 565
Query: 243 QKNI-ELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKIL-LK 300
+ I +L + YQ A LL+FN +D+++ I + L D+ L L+ K I+
Sbjct: 566 KGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGL--DETSIRLPLLALIKTGIIECS 623
Query: 301 EPNTKTISQSDHFEFNSKFTDRMRR------IKIPLPPVDERKKIV--EDVDKDRRYAID 352
EP+ K + F NSKF+ + + ++I E ++ V ++++K+R + +
Sbjct: 624 EPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQTVSEQEIEKERFFKLQ 683
Query: 353 AALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDK-ENPNM 411
AA+VRIMKS+K + H L E Q+S+ F P I AIKK +E LI ++Y+ R +NP+
Sbjct: 684 AAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYLIDQEYIRRTTDDNPSA 743
Query: 412 FRY 414
+Y
Sbjct: 744 RKY 746
>sp|Q21346|CUL6_CAEEL Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1
Length = 729
Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 210/416 (50%), Gaps = 26/416 (6%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-KAVG--------GSSSSELLA 67
I K++E+H+ Y + F + LF ++L +A + F AV + S++ LA
Sbjct: 324 ITKLLEVHEIYFNLINKAFDRNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLA 383
Query: 68 TFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAND 127
+CD +LKK N K+ DE L+K + +L YIS+KD+F +Y+ + R++ + SA+D
Sbjct: 384 RYCDQLLKK--NSKVQDET---ALDKALTVLKYISEKDVFQLYYQNWFSERIINNSSASD 438
Query: 128 DHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVL 187
D E +T L G ++T + MV D ++++ T F++ ID +V +
Sbjct: 439 DAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEFKDI-----KTEKSIDFNVILQ 493
Query: 188 TTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIE 247
TTG WPS + LP E+ ++ F FY R+L W YS + +N K +K
Sbjct: 494 TTGAWPSLDQIKIILPRELSTILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYV 553
Query: 248 LIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP-NTKT 306
IV+ Q TL LFN D + +I + +T ++ SL+ +L+ + N K
Sbjct: 554 FIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKD 613
Query: 307 ISQSDHF-EFNSKFTDRMRRI----KIPLPPVDERKKIVED-VDKDRRYAIDAALVRIMK 360
D N+K+ ++ R+ I D V++ V+ DR+Y I A +VRIMK
Sbjct: 614 GYPPDAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMK 673
Query: 361 SRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 416
+RK L H L++E + QL F P+++ IK +E LI + Y+ R + N++ YLA
Sbjct: 674 TRKSLTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>sp|Q93034|CUL5_HUMAN Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4
Length = 780
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 216/440 (49%), Gaps = 40/440 (9%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KAVG----- 58
+ +++ L +++ + V F + F A +A++ N K VG
Sbjct: 341 VEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP 400
Query: 59 GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLAR 117
S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L R
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 118 RLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 176
RL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A
Sbjct: 461 RLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLA 520
Query: 177 HPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 235
P +++ +L G W S + ++LP+E+ + + FY+ RKL W + +
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNG 580
Query: 236 NINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC- 292
I K E +L V+T+Q A L +N R +S+ + L +L R L SL
Sbjct: 581 IITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF 640
Query: 293 --AKYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKI------PLPPVDER 336
K ++LL EP K ++ F N +F+ +R KI L R
Sbjct: 641 PKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMR 700
Query: 337 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 396
++ E + + R A+++IMK RK + + QL +E VE L MF P K IK+++E L
Sbjct: 701 EEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWL 760
Query: 397 ITRDYLERDKENPNMFRYLA 416
I Y+ RD+ + N F Y+A
Sbjct: 761 IEHKYIRRDESDINTFIYMA 780
>sp|Q5RB36|CUL5_PONAB Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3
Length = 780
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 216/440 (49%), Gaps = 40/440 (9%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KAVG----- 58
+ +++ L +++ + V F + F A +A++ N K VG
Sbjct: 341 VEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP 400
Query: 59 GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLAR 117
S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L R
Sbjct: 401 ESKCPELLAIYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 118 RLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 176
RL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A
Sbjct: 461 RLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLA 520
Query: 177 HPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 235
P +++ +L G W S + ++LP+E+ + + FY+ RKL W + +
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNG 580
Query: 236 NINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC- 292
I K E +L V+T+Q A L +N R +S+ + L +L R L SL
Sbjct: 581 IITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF 640
Query: 293 --AKYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKI------PLPPVDER 336
K ++LL EP K ++ F N +F+ +R KI L R
Sbjct: 641 PKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMR 700
Query: 337 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 396
++ E + + R A+++IMK RK + + QL +E VE L MF P K IK+++E L
Sbjct: 701 EEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWL 760
Query: 397 ITRDYLERDKENPNMFRYLA 416
I Y+ RD+ + N F Y+A
Sbjct: 761 IEHKYIRRDESDINTFIYMA 780
>sp|Q9D5V5|CUL5_MOUSE Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3
Length = 780
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 215/440 (48%), Gaps = 40/440 (9%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KAVG----- 58
+ +++ L +++ + V F + F A +A++ N K VG
Sbjct: 341 VEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP 400
Query: 59 GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLAR 117
S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L R
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 118 RLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 176
RL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A
Sbjct: 461 RLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLA 520
Query: 177 HPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 235
P +++ +L G W S + ++LP+E+ + + FY+ RKL W + +
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNG 580
Query: 236 NINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC- 292
I K E +L V+T+Q A L +N R +S+ + L +L R L SL
Sbjct: 581 IITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF 640
Query: 293 --AKYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKI------PLPPVDER 336
K ++LL +P K ++ F N F+ +R KI L R
Sbjct: 641 PKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMR 700
Query: 337 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 396
++ E + + R A+++IMK RK + + QL +E VE L MF P K IK++ME L
Sbjct: 701 EEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWL 760
Query: 397 ITRDYLERDKENPNMFRYLA 416
I Y+ RD+ + N F Y+A
Sbjct: 761 IEHRYIRRDEADINTFIYMA 780
>sp|Q9JJ31|CUL5_RAT Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3
Length = 780
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 215/440 (48%), Gaps = 40/440 (9%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KAVG----- 58
+ +++ L +++ + V F + F A +A++ N K VG
Sbjct: 341 VEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP 400
Query: 59 GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLAR 117
S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L R
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 118 RLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 176
RL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A
Sbjct: 461 RLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLA 520
Query: 177 HPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 235
P +++ +L G W S + ++LP+E+ + + FY+ RKL W + +
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNG 580
Query: 236 NINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC- 292
I K E +L V+T+Q A L +N R +S+ + L +L R L SL
Sbjct: 581 IITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF 640
Query: 293 --AKYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKI------PLPPVDER 336
K ++LL +P K ++ F N F+ +R KI L R
Sbjct: 641 PKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMR 700
Query: 337 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 396
++ E + + R A+++IMK RK + + QL +E VE L MF P K IK+++E L
Sbjct: 701 EEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWL 760
Query: 397 ITRDYLERDKENPNMFRYLA 416
I Y+ RD+ + N F Y+A
Sbjct: 761 IEHKYIRRDEADINTFIYMA 780
>sp|P53202|CUL3_YEAST Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CUL3 PE=1 SV=1
Length = 744
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 199/386 (51%), Gaps = 24/386 (6%)
Query: 45 LKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDK 104
L + F ++ +K G+ SE L+T+ D+ +K+ + I++ L KL+ +++K
Sbjct: 369 LGDVFSMYFSKE--GALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTEK 426
Query: 105 DLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQT 164
D+F + Y+K+L+RRLL RS + E+ ++ +K+ G FTSK+E M+ D++L+ E
Sbjct: 427 DIFEKIYKKQLSRRLLQQRSLVEI-EKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQ 485
Query: 165 SFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-----LNLPSEMVKCVEVFKGFYET 219
+F+ + N+ + + VLT WP ++S++ ++LP M + + F+G+Y
Sbjct: 486 AFQH---STINSIEYLSFAPQVLTRTSWP-FQSTNPIDEGISLPPRMSQILAGFEGYYSL 541
Query: 220 KTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLT 279
K K R L W + L I +F E+ S Y LLF + L+ EI ++
Sbjct: 542 KYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIP 601
Query: 280 HDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLP--PVDERK 337
DD+ L+ S+S +LK+ ++ S + F N F+ R++K+P+ P+ +K
Sbjct: 602 IDDVKSLVMSMSTIPRCKILKKSSS---SGNMKFSVNYFFSSPNRKVKVPVIACPLPSQK 658
Query: 338 -------KIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 390
V+ D + + A +VRIMK+ L HQQL+ ++ +K
Sbjct: 659 SDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILK 718
Query: 391 KRMEDLITRDYLERDKENPNMFRYLA 416
+ ++ LI ++Y++R+ ++P+ + YL+
Sbjct: 719 RSIQLLIEKEYIQRNADDPSYYHYLS 744
>sp|Q29425|CUL5_RABIT Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3
Length = 780
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 214/440 (48%), Gaps = 40/440 (9%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KAVG----- 58
+ +++ L +++ + V F + F A +A++ N K VG
Sbjct: 341 VEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP 400
Query: 59 GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLAR 117
S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L R
Sbjct: 401 ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTR 460
Query: 118 RLLFDRSANDDHERSILTKLKQ-QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 176
RL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A
Sbjct: 461 RLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLA 520
Query: 177 HPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 235
P +++ +L G W S + ++LP+E+ + + FY+ RKL W + +
Sbjct: 521 LPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNG 580
Query: 236 NINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC- 292
I K E +L V+T+Q A L +N R +S+ + L +L R L SL
Sbjct: 581 IITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF 640
Query: 293 --AKYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKI------PLPPVDER 336
K ++LL EP K ++ F N +F+ +R KI L R
Sbjct: 641 PKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMR 700
Query: 337 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 396
++ E + + R ++IMK RK + + QL +E VE L MF P K IK+++E L
Sbjct: 701 EEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWL 760
Query: 397 ITRDYLERDKENPNMFRYLA 416
I Y+ RD+ + N F Y+A
Sbjct: 761 IEHKYIRRDESDINTFIYMA 780
>sp|Q23639|CUL5_CAEEL Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2
Length = 765
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 196/387 (50%), Gaps = 33/387 (8%)
Query: 60 SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARR 118
S +ELLA +CD +L+K ++KL+ E I+E L +V+ +L Y+ +KD+F F+R L+RR
Sbjct: 382 SKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFHRAHLSRR 441
Query: 119 LLFDRSANDDHERSILTKLKQQCG--GQFTSKMEGMVTDLTLARENQTSFEEYLSN-NQN 175
L+ + SA+ + E ++TKL+ +CG +K+ M+ D+ L ++ +SF++ L+ N N
Sbjct: 442 LILEMSADQEKEEMMVTKLR-ECGMPSDAVNKLSRMLQDIELNKDMNSSFKKALTGTNNN 500
Query: 176 AHPGIDLSVTVLTTGFWPSYKSSDL--NLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLG 233
+++ VL G W S + +LP E+ V + FY+ + RKL W++
Sbjct: 501 KSIADSINMKVLNGGAWGRGGSERIRFSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWS 560
Query: 234 QCN-INGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDDLVRLLHSL 290
+ G +L +T+Q A L FN D++S + L +L R L SL
Sbjct: 561 SGTMVFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSL 620
Query: 291 SC---AKYKILLKEPNTKTISQSD-----HFEFNSKF-------------TDRMRRIKIP 329
+Y+ILL + + T++ D F N F + + R+++
Sbjct: 621 VAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLS 680
Query: 330 LPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 389
L E++ E + R + +V+I+K+RK QL E VE L +F P+ K I
Sbjct: 681 LEANAEKEH--ESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKII 738
Query: 390 KKRMEDLITRDYLERDKENPNMFRYLA 416
K++++ LI Y+ER ++ N F Y++
Sbjct: 739 KEQIDWLIENKYMERRADDINTFVYIS 765
>sp|Q12018|CDC53_YEAST Cell division control protein 53 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC53 PE=1 SV=1
Length = 815
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 206/442 (46%), Gaps = 48/442 (10%)
Query: 17 IRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN----------KAVGGSSSSELL 66
I+K++E+HD + + F + KAL A F N S +SE+L
Sbjct: 380 IKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEML 439
Query: 67 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 126
A + D +LKK +++ + +E ++ + Y++DKD F YR+ A+RL+ S +
Sbjct: 440 AKYSDILLKKATKPEVASDMSDE---DIITIFKYLTDKDAFETHYRRLFAKRLIHGTSTS 496
Query: 127 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSN----NQNAHPGIDL 182
+ E +I+ +L+ ++T K+ M D+ L++ + F L N ++ +P DL
Sbjct: 497 AEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYP--DL 554
Query: 183 SVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNIN--- 238
VL WP SY+ + LP E+V E K Y K R L W++ L + +
Sbjct: 555 QPFVLAENMWPFSYQEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADI 614
Query: 239 GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIM--TQLNLTH---------------- 280
GK + V+ +Q A LLL+N +D L+ I T L + H
Sbjct: 615 GKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAMVPFIKFKLIQQ 674
Query: 281 -----DDLVRLLHSLSCAK-YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD 334
D LV+ ++ YK L N + ++D + S K+ +
Sbjct: 675 VPPGLDALVKPETQFKLSRPYKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLT 734
Query: 335 ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 394
E ++I ++++ +R+ ++A +VRIMK+++ L H LV+EC+ Q + F + +K+ ++
Sbjct: 735 EDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAID 794
Query: 395 DLITRDYLERDKENPNMFRYLA 416
LI + YL+R + + + YLA
Sbjct: 795 SLIQKGYLQRGDDGES-YAYLA 815
>sp|Q8BZQ7|ANC2_MOUSE Anaphase-promoting complex subunit 2 OS=Mus musculus GN=Anapc2 PE=1
SV=2
Length = 837
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 94 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 152
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 516 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 575
Query: 153 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 211
+ D+ +R N EE P + +L++ FWP +K L +P ++ ++
Sbjct: 576 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 635
Query: 212 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 271
V+ YE R L+W ++LG ++ + + + + V+ QA LL F + E
Sbjct: 636 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQNQASWTLEE 695
Query: 272 I 272
+
Sbjct: 696 L 696
>sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1
SV=1
Length = 822
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 94 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 152
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 501 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 560
Query: 153 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 211
+ D+ +R N EE P + +L++ FWP +K L +P ++ +E
Sbjct: 561 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALE 620
Query: 212 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 270
+ YE R L+W ++LG ++ + + + + V+ QA LL F D+ S++
Sbjct: 621 AYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQ--DQASWT 677
>sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2 OS=Arabidopsis thaliana
GN=APC2 PE=1 SV=1
Length = 865
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 97 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 156
L+ I K+ YR LA +LL + D E + LK G + E M+ DL
Sbjct: 543 LVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDL 602
Query: 157 TLARENQTSFEEYLSNN----QNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 212
++ T+ ++ +N L+ T+L+T FWP + L LP + K +
Sbjct: 603 IDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELPGPVDKLLSD 662
Query: 213 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 272
+ Y RKL W +LG + +FE + ++ VS AA ++ F +Y ++
Sbjct: 663 YANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTYKDL 722
Query: 273 MTQLNLTHDDLVR 285
+ + D L R
Sbjct: 723 AEVIGIPIDALNR 735
>sp|P34514|APC2_CAEEL Anaphase-promoting complex subunit 2 OS=Caenorhabditis elegans
GN=apc-2 PE=1 SV=3
Length = 731
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 97 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 156
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 157 TLARENQTSFEEYLSNNQNAH--PGIDLSVTVLTTGFWPSYKS--SDLNLPSEMVKCVEV 212
+ + FE+ + + P I +S ++++ +WP ++ ++ +P + ++V
Sbjct: 465 IHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMDV 524
Query: 213 FKGFYETKTKHRKLTWIYSLG----QCNING 239
++ Y + RKL W+ S+G NI+G
Sbjct: 525 YQETYLDVKRDRKLEWLRSVGCVEVSINIDG 555
>sp|Q874R3|APC2_SCHPO Anaphase-promoting complex subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=apc2 PE=1 SV=1
Length = 681
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Query: 137 LKQQCGGQFTSKMEGMVTDLTLAR--ENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPS 194
LK + G M+ D+ +R + E Y+S L VT+L+ FWP+
Sbjct: 419 LKYRFGETVLQMCSVMLNDIENSRFIDQSIHMENYVSKG--------LHVTILSRLFWPT 470
Query: 195 YKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQ 254
+LP + K ++ + Y + + R+L ++ +LG + + E + + L V+ Q
Sbjct: 471 LSVRYFHLPGPLKKELDAYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPEQ 530
Query: 255 AATLLLFNTSDRL 267
AA + LF + L
Sbjct: 531 AAFISLFEETSTL 543
>sp|Q9XIE9|CLL2_ARATH Putative cullin-like protein 2 OS=Arabidopsis thaliana GN=At1g59790
PE=3 SV=2
Length = 374
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 20 IIELHDKYMEYVTNCFINHTLFHKA 44
+IELH+K++ YV CF NHTLFHK
Sbjct: 334 LIELHNKFIVYVIECFQNHTLFHKV 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,313,883
Number of Sequences: 539616
Number of extensions: 5829647
Number of successful extensions: 18629
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 18377
Number of HSP's gapped (non-prelim): 100
length of query: 416
length of database: 191,569,459
effective HSP length: 120
effective length of query: 296
effective length of database: 126,815,539
effective search space: 37537399544
effective search space used: 37537399544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)