Your job contains 1 sequence.
>014913
MEEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECE
LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLR
SIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLK
ISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQELF
VEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVSILIDLLLDSSLERRASE
MILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATNSV
LQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKNSPCVPENLRSLFPA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014913
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 1292 9.1e-132 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 803 6.0e-80 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 496 2.0e-47 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 487 1.8e-46 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 443 8.4e-42 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 384 1.5e-35 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 373 2.2e-34 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 362 3.2e-33 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 354 2.3e-32 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 327 1.2e-28 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 230 5.3e-28 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 313 3.1e-27 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 297 2.4e-25 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 251 8.0e-25 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 286 3.9e-23 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 284 9.3e-23 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 283 1.1e-22 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 183 9.3e-22 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 242 3.1e-20 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 249 2.0e-18 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 220 4.2e-18 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 238 1.5e-17 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 184 4.4e-17 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 221 3.5e-15 1
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 215 3.6e-15 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 213 5.4e-15 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 191 3.8e-14 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 209 7.6e-14 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 201 1.5e-13 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 205 2.4e-13 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 202 5.6e-13 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 196 9.4e-13 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 199 1.2e-12 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 168 3.0e-11 3
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 133 1.3e-10 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 178 2.3e-10 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 143 1.9e-09 2
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 165 2.3e-09 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 160 4.2e-09 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 164 4.2e-09 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 164 4.3e-09 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 164 4.4e-09 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 112 5.4e-09 2
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 110 5.7e-09 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 159 1.5e-08 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 159 1.5e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 160 1.6e-08 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 143 2.2e-08 2
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 157 2.6e-08 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 156 3.3e-08 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 159 3.5e-08 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 149 2.0e-07 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 149 4.6e-07 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 148 5.5e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 148 5.6e-07 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 142 2.7e-06 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 115 3.6e-06 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 143 4.1e-06 2
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 139 5.8e-06 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 135 6.1e-06 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 137 8.9e-06 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 134 1.0e-05 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 136 1.2e-05 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 132 1.9e-05 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 122 6.2e-05 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 121 0.00016 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 115 0.00027 1
FB|FBgn0027052 - symbol:CHIP "CHIP" species:7227 "Drosoph... 115 0.00048 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 115 0.00052 1
POMBASE|SPAC20H4.10 - symbol:ufd2 "ubiquitin-protein liga... 122 0.00052 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 115 0.00053 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 115 0.00053 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 115 0.00053 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 115 0.00053 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 115 0.00058 1
WB|WBGene00006734 - symbol:ufd-2 species:6239 "Caenorhabd... 121 0.00065 1
UNIPROTKB|Q95QB5 - symbol:ufd-2 "Protein UFD-2, isoform b... 121 0.00065 1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 112 0.00075 1
UNIPROTKB|Q5X159 - symbol:lubX "E3 ubiquitin-protein liga... 111 0.00086 1
UNIPROTKB|Q5ZRQ0 - symbol:lubX "E3 ubiquitin-protein liga... 111 0.00092 1
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
Identities = 255/417 (61%), Positives = 322/417 (77%)
Query: 2 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECEL 61
EEI++P FFLCPISL IMKDPV V TGITYDR+SIEKWLFAGK N+CP+TKQ ++ + +L
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDIT-DADL 66
Query: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRS 121
TPNHTLRRLIQSWCTLNASYG+ERIPTP+PPI K++I KL+ ++A S + Q+KCLK+LR
Sbjct: 67 TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 126
Query: 122 IAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLKI 181
I +EN TNKRCLE+AG EFLA+ V+N + E+ DEAL++L +L+
Sbjct: 127 IVSENATNKRCLEAAGVPEFLANIVSNDS-------------ENGSLTDEALNLLYHLET 173
Query: 182 SELGLKSLVMGR-NGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQELF 240
SE LK+L+ + + V SLT+IMQRG YESR YA LLLK++LEVA+PMQ ++L+ E+F
Sbjct: 174 SETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVF 233
Query: 241 VEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAG--AVXXXXXXXXXXXXERRA 298
EV+Q+L D ISQ+A+K+A+ +LVNICPWGRNR K VEAG +V ERR
Sbjct: 234 TEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRG 293
Query: 299 SEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATN 358
EM + VLDLLCQCAEGRAE L HGA +A+V KKILRVSQ AS+RAVR+LLS+ +F AT
Sbjct: 294 PEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATP 353
Query: 359 SVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKNSPCVPENLRSLFP 415
++L EMLQ+GVVAKLCLVLQV KTK+KA+E+LKLHAR WK+SPC+P+N+ +P
Sbjct: 354 ALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 181/373 (48%), Positives = 243/373 (65%)
Query: 52 KQVLSSECELTPNHTLRRLIQSWCTLNASYGIERI--PTPKPPINKAQITKLLNEAAKSP 109
++++ S C L ++ + R+ + S IE++ + +N+ + K L +
Sbjct: 68 RRLIQSWCTLNASYGIERIPTPKPPICKSE-IEKLIKESSSSHLNQVKCLKRLRQIVSEN 126
Query: 110 QMQIKCLK--KLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSR 167
+CL+ ++ A +N ++ + +S N N M +S +N +SSR
Sbjct: 127 TTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSS---NLNDMCQS-NMLENRFDSSR 182
Query: 168 PV-DEALSILCNLKISELGLKSLVMGRNGT-FVDSLTQIMQRGTYESRAYAVLLLKSMLE 225
+ DEALS+L +L SE LKSL+ + GT V +LT+IMQRG YESRAYA LLLK +LE
Sbjct: 183 SLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLE 242
Query: 226 VAEPMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXX 285
VA+PMQ+I L +ELF EVIQ+LHD IS +A++SA+++LV CPWGRNR K VE G +
Sbjct: 243 VADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMI 302
Query: 286 XXXXX--XXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASER 343
ERR SEM + VLD+LCQCAEGRAE L HGA +A+VSKKILRVSQ+ SER
Sbjct: 303 IELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSER 362
Query: 344 AVRILLSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKNS 403
AVR+LLS+ +F AT S+LQEMLQ+GVVAKLCLVLQV KTK+KA+E+LKLHAR W+ S
Sbjct: 363 AVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRES 422
Query: 404 PCVPENLRSLFPA 416
PCVP NL +PA
Sbjct: 423 PCVPRNLYDSYPA 435
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 128/211 (60%), Positives = 156/211 (73%)
Query: 2 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECEL 61
+EI++P+FFLCPISL IMKDPV V TGITYDRESIEKWLF+GK N+CP+TKQV++ E +L
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVIT-ETDL 61
Query: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRS 121
TPNHTLRRLIQSWCTLNASYGIERIPTPKPPI K++I KL+ E++ S Q+KCLK+LR
Sbjct: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQ 121
Query: 122 IAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEG---------------FDNLHESS 166
I +EN TNKRCLE+A EFLA+ V+NS SP +N +SS
Sbjct: 122 IVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSS 181
Query: 167 RPV-DEALSILCNLKISELGLKSLVMGRNGT 196
R + DEALS+L +L SE LKSL+ + GT
Sbjct: 182 RSLMDEALSVLYHLDTSETALKSLLNNKKGT 212
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 137/407 (33%), Positives = 212/407 (52%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I +P F CPISL +M+DPVTV TG TYDR SIE W+ G N TCP+T+ LS + L P
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS-DFTLIP 70
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAK------SPQMQIKCLK 117
NHTLRRLIQ WC N S G+ERIPTPK P + + LL++A+ S + + L+
Sbjct: 71 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALR 130
Query: 118 KLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILC 177
+LR A +++ N+ + + A E L + + SS V E+L++L
Sbjct: 131 RLRGFARDSDKNRVLIAAHNATEILIKILFSETT-------------SSELVSESLALLV 177
Query: 178 NLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQL---IS 234
L I+E + G V+ LT+++ + E+R A L++ + + L IS
Sbjct: 178 MLPITEPNQFVSISSDPGR-VEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSIS 236
Query: 235 LRQELFVEVIQVLHDHIS-QQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXX 293
+ +F V+ +L + IS ++A K ++ L +C R + AGA
Sbjct: 237 NSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADF 296
Query: 294 XERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISK 353
+R +E L ++LLC+ EG A +H + ++ K ILRVS A+E A LL++
Sbjct: 297 -DRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC- 354
Query: 354 FSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAW 400
+A +E GVV +L L++Q + + + K KA+++LKL +W
Sbjct: 355 -TAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 135/413 (32%), Positives = 215/413 (52%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I +P F CPISL +M DPVT+ TG TYDR SI+ W+ G N TCP+T+ LS + L P
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG-NTTCPVTRVALS-DFTLIP 69
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAK------SPQMQIKCLK 117
NHTLRRLIQ WC N S G+ERIPTPK P + + LL++A+ S + + ++
Sbjct: 70 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIR 129
Query: 118 KLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILC 177
+LR +A ++E N+ + A E L + + SS V E+L++L
Sbjct: 130 RLRGLARDSEKNRVLIAGHNAREILVRILFAD---------IETTSLSSELVSESLALLV 180
Query: 178 NLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQL---IS 234
L ++E +++ + + V +T+++ + E R A L++ +L A+ M L IS
Sbjct: 181 LLHMTETECEAVAS--DPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIIS 238
Query: 235 LRQELFVEVIQVLHDHIS-QQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXX 293
+F V+ +L + IS ++A K ++ + +C + R + AGA
Sbjct: 239 GSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADF 298
Query: 294 XERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISK 353
+R +E L ++LLC+ EG A +H + ++ K ILRVS A+E A LL++
Sbjct: 299 -DRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC- 356
Query: 354 FSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKNSPCV 406
+A E G+V +L L++Q D + + K KA+ +LKL +W + V
Sbjct: 357 -TAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTV 408
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 121/414 (29%), Positives = 220/414 (53%)
Query: 3 EIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELT 62
EI +P F CPIS+ +MKDPV + TGITYDR SIE W+ +G N TCP+T VL++ ++
Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSG-NKTCPVTNTVLTTFDQI- 85
Query: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQ---ITKLLNEAAKSPQMQIKC---L 116
PNHT+R++IQ WC S I+RIPTP+ P+ + I++ L+ A + + KC +
Sbjct: 86 PNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYE-KCGVII 144
Query: 117 KKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSIL 176
+K++ + E+E N++C+ +V ++ + + F + + ++E LS+L
Sbjct: 145 EKIKKLGDESEKNRKCVNE-NSVGWVLC---------DCFDKFSGDEKLTFMLNEILSLL 194
Query: 177 CNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEP-MQLISL 235
+ +GL+ + + T + +++ R A ++K +L + E + ++
Sbjct: 195 TWM--FPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAV 252
Query: 236 RQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKG--VEAGAVXXXXXXXXXXX 293
+ +++++ D +S ++KS+L + + + I +E G V
Sbjct: 253 ENGVAEALVKLIRDSVSSSSTKSSLIAIYQMV-LQKPEIASEFLEIGLVSITVEMIVDA- 310
Query: 294 XERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISK 353
E E L VLD +C+ GR E+ K+ + ++ KKI +VS++A+ ++ ++L + K
Sbjct: 311 -ENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWK 369
Query: 354 FSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWK-NSPCV 406
T +V ++ +++G K+ LVLQV +TK+KA E+LK+ K S CV
Sbjct: 370 TGNTVAV-EDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCV 422
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 122/417 (29%), Positives = 206/417 (49%)
Query: 3 EIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELT 62
EI +P+ F CPIS +MKDPV + +GITYDRE+IEKW +G TCP+T VL+S E
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQ-TCPVTNTVLTS-LEQI 87
Query: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQM--QIKCLKKLR 120
PNHT+RR+IQ WC + GIERIPTP+ P+ Q++++ + + + C++ +
Sbjct: 88 PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 121 SIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILC-NL 179
+ + ++R + E A V + + F +S ++E +S+L L
Sbjct: 148 KMTRLGKESERNRKCVK--ENGAGLV-----LCVCFDAFSENANASLLLEETVSVLTWML 200
Query: 180 KISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEV----AEPMQLISL 235
I G L +F + L ++++ G A L+K +LE+ + I+
Sbjct: 201 PIGLEGQSKLTT--TSSF-NRLVELLRNGDQN----AAFLIKELLELNVTHVHALTKING 253
Query: 236 RQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXE 295
QE F++ I ++ S + +L N + +E V E
Sbjct: 254 VQEAFMKSINRDSTCVNSLISIHHM-ILTN----QETVSRFLELDLVNITVEMLVDS--E 306
Query: 296 RRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFS 355
E LTVL+++C+ EGR ++ ++ + I+ KKIL++S+ + V ++ + K S
Sbjct: 307 NSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE--KKDLVSVMWKVCK-S 363
Query: 356 ATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKNSPCVPENLRS 412
S ++E L++G KL ++LQV TK+K E+LK+ + K + V + S
Sbjct: 364 GDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNGFVDRSYSS 420
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 110/393 (27%), Positives = 189/393 (48%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
VP FF CPISL +MK PV++ TG+TYDR SI++WL G NNTCP T Q+L ++ E PN
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDG-NNTCPATMQILQNK-EFVPNL 68
Query: 66 TLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIAAE 125
TL RLI W S I R + P + +N A + +++ K+ A E
Sbjct: 69 TLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARE 123
Query: 126 NETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLK---IS 182
++ N+ L AG +F+A V + + +S D+ V EA+ IL ++
Sbjct: 124 SDENREFL--AGKDDFVAMLV---DLISDSRNFSDS---QLLLVGEAVKILSMIRRKIFD 175
Query: 183 ELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQELFVE 242
L +L++ G + S +++RG + + +L+ + AE +I+ + L E
Sbjct: 176 RRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTE 235
Query: 243 VIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXERRASEMI 302
+I+++ ++ L +L+ I R ++ + V +E
Sbjct: 236 IIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKC 295
Query: 303 LTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATNSVLQ 362
L +L+ + C EGR+E+ G + V K+++VS A+E AV +L S+
Sbjct: 296 LKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQD 354
Query: 363 EMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKL 395
+++I V K+ L+LQ + S+ + ++LK+
Sbjct: 355 AVIRINGVTKILLLLQSNCSLTVRHMLTDLLKV 387
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 114/402 (28%), Positives = 193/402 (48%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I VPTFF CPISL +MK PV++ TG+TYDR SI++WL G NNTCP T Q+L ++ + P
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGG-NNTCPATMQILQNK-DFIP 65
Query: 64 NHTLRRLIQSWC-TLNASYGIERIPTPKPPINKAQITKLLNEAA--KSPQMQIKCLKKLR 120
N TL+RLI+ W ++ +E P + +I ++ K + + L K+
Sbjct: 66 NRTLQRLIEIWSDSVRRRTCVESAELAAP--TRDEIADAIDRVKIEKEERDDREVLSKIV 123
Query: 121 SIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHES-SRPVDEALSILCNL 179
E++ N+ L AG +F+ V N ++ F+ + S V EA+ IL +
Sbjct: 124 RFGRESDDNRGFL--AGKDDFVKLLVDLINQVD-----FETTSAAKSLVVQEAVKILSTI 176
Query: 180 --KISELG-LKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLR 236
K+S+ +L++ + + + + G E + LL+ + AE LI+ R
Sbjct: 177 RSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAER 236
Query: 237 QELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXER 296
L E+++ + +S+L L+ I R ++ + +
Sbjct: 237 DGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSL 296
Query: 297 RAS--EMILTVLDLLCQCAEGRAELLK-HGAGLAIVSKKILRVSQVASERAVRILLSISK 353
S E L +L++L EGR+E+ G L V KK+++VS A+E AV +L S+S
Sbjct: 297 SVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSY 356
Query: 354 FSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKL 395
+ L+ + + V K+ L+LQ + S + ++LK+
Sbjct: 357 LFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKV 398
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 118/402 (29%), Positives = 197/402 (49%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I VP+FF CPISL +M+ PV++ TG+TYDR SI++WL G NNTCP T Q+L ++ + P
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGG-NNTCPATMQLLKTK-DFVP 67
Query: 64 NHTLRRLIQSWC-TLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSI 122
N TL+RLI W ++ + + P PP + TK M ++ L K+
Sbjct: 68 NLTLQRLINIWSDSIGRRHNGDS-PVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRF 126
Query: 123 AAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLKIS 182
++++N+ L +EF+ V + E V A+ IL ++K+
Sbjct: 127 VKDSDSNREFLSKK--MEFVPMLVDIIRTKKTKIE----------LVIMAIRILDSIKVD 174
Query: 183 ELGLKSLVMGRNGTFVDSLTQIM---QRGTYESRAYAVLLLKSMLEVAEPMQLISLRQEL 239
L +L++ +G D LT I+ QRG ES+ +V +L + A+ +I+ R +
Sbjct: 175 RERLSNLMLANDGG--DCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGV 232
Query: 240 FVEVIQVLHDHISQQAS--KSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXERR 297
E+++ + S S +++L L+ I R R K + A A+
Sbjct: 233 LTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNV 292
Query: 298 A-SEMILTVLDLLCQCAEGRAELLKHGAGLAI--VSKKILRVSQVASERAVRILLSISKF 354
A +E L +L+ L EGR E+ G + V KK+L+VS A+E AV IL +
Sbjct: 293 AVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYV 352
Query: 355 SATNSVLQEMLQ-IGVVAKLCLVLQVDNSMKTKDKAREVLKL 395
+ ++E ++ V KL +V+Q + S + A++++K+
Sbjct: 353 FREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKV 394
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 327 (120.2 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 94/287 (32%), Positives = 144/287 (50%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I +P F CPISL +MKDPV V TG TY+R IEKW+ +G ++TCP T+Q +S+ LTP
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASG-HHTCPTTQQKMSTSA-LTP 328
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPPI------NKAQITKLLNEAAKSP--QMQIKC 115
N+ LR LI WC N +R P P +A I LL++ SP + Q
Sbjct: 329 NYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLC-SPDTEEQRSA 387
Query: 116 LKKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSI 175
+LR +A N N+ C+ AGA+ L S +++S+ R + A++
Sbjct: 388 AAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDL---------------RTQEHAVTA 432
Query: 176 LCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISL 235
L NL I E S++ +G V S+ +++ G+ E+R A L S+ + E +++
Sbjct: 433 LLNLSIHEDNKASIIS--SGA-VPSIVHVLKNGSMEARENAAATLFSLSVIDE--YKVTI 487
Query: 236 RQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
+ + VL SQ+ K A L N+C + N+ + + AG V
Sbjct: 488 GGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLV 534
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 230 (86.0 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 56/162 (34%), Positives = 94/162 (58%)
Query: 2 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECEL 61
+++ +P FLCP+SL +MKDPV V TG TY+R I++W+ G N TCP T+Q L + L
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCG-NLTCPKTQQKLEN-FTL 294
Query: 62 TPNHTLRRLIQSWCTLNASYGIERIPT------PKPPINKAQITKLLNE-AAKSPQMQIK 114
TPN+ LR LI WC A + IE+ P K + + I L+ +++S + +
Sbjct: 295 TPNYVLRSLISRWC---AEHNIEQ-PAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRN 350
Query: 115 CLKKLRSIAAENETNKRCLESAGAVEFLASFVTNSN-AMEES 155
+ ++RS++ + N+ + AGA+ L + +T+ + A +E+
Sbjct: 351 AVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQEN 392
Score = 153 (58.9 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 61/231 (26%), Positives = 109/231 (47%)
Query: 170 DEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEP 229
+ A++ + NL I E K L+M V S+ Q+++ GT E+R A L S L +A+
Sbjct: 391 ENAITCVLNLSIYENN-KELIMFAGA--VTSIVQVLRAGTMEARENAAATLFS-LSLADE 446
Query: 230 MQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXX 289
++I ++ +L + + + K A L N+C + N+ + V AG V
Sbjct: 447 NKIIIGGSGAIPALVDLLENG-TPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKML 505
Query: 290 XXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVAS-ERAVRIL 348
R E LT+L +L + ++ ++K A++ IL+ Q + E A IL
Sbjct: 506 SDSTRHRMVDEA-LTILSVLANNQDAKSAIVKANTLPALIG--ILQTDQTRNRENAAAIL 562
Query: 349 LSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARA 399
LS+ K T ++ + ++G V L + L + + + K KA +L+L +A
Sbjct: 563 LSLCKRD-TEKLIT-IGRLGAVVPL-MDLSKNGTERGKRKAISLLELLRKA 610
Score = 55 (24.4 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 167 RPVDEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEV 226
R VDEAL+IL L ++ KS ++ N + +L I+Q +R A +L S+ +
Sbjct: 512 RMVDEALTILSVLANNQ-DAKSAIVKANT--LPALIGILQTDQTRNRENAAAILLSLCK- 567
Query: 227 AEPMQLISLRQELFVEVIQVLHDHISQQASKSALEVL 263
+ +LI++ + V + L + +++ + A+ +L
Sbjct: 568 RDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLL 604
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 313 (115.2 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 114/409 (27%), Positives = 191/409 (46%)
Query: 2 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECEL 61
+ + +P FLCPISL +MKDP V TG TY+R I++W+ G N +CP T+Q L + L
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCG-NLSCPKTQQKLEN-FTL 296
Query: 62 TPNHTLRRLIQSWCT----------LNA----SYGIERIPTPKPPINKAQITKLLNEAAK 107
TPN+ LR LI WCT +N S G R + +A + KL +++ +
Sbjct: 297 TPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIE 356
Query: 108 SPQMQIKCLKKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSR 167
+ + ++RS++ + N+ + AGA+ L +T+ E
Sbjct: 357 DRRTAVS---EIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQ------------ 401
Query: 168 PVDEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVA 227
+ A++ + NL I E K L+M V S+ +++ G+ E+R A L S L +A
Sbjct: 402 --ENAVTCILNLSIYEHN-KELIMLAGA--VTSIVLVLRAGSMEARENAAATLFS-LSLA 455
Query: 228 EPMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXX 287
+ ++I + ++ +L + S + K A L N+C + N+ + V AG V
Sbjct: 456 DENKIIIGASGAIMALVDLLQ-YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVK 514
Query: 288 XXXXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVAS-ERAVR 346
ER A E LT+L +L + +L+ A ++ L+ Q + E A
Sbjct: 515 MLTDSSSERMADEA-LTILSVLASNQVAKTAILRANAIPPLID--CLQKDQPRNRENAAA 571
Query: 347 ILLSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKL 395
ILL + K T ++ + ++G V L + L D + + K KA +L+L
Sbjct: 572 ILLCLCKRD-TEKLIS-IGRLGAVVPL-MELSRDGTERAKRKANSLLEL 617
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 297 (109.6 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 109/410 (26%), Positives = 187/410 (45%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I VP F+CPISL +M DPV + TG TYDR SI +W+ G + TCP T Q+L + + P
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEG-HCTCPKTGQMLM-DSRIVP 360
Query: 64 NHTLRRLIQSWCTLNA-SYGIERIPTP----------KPPI--NKAQITKLLNEAAKSPQ 110
N L+ LI WCT + SY E +P K + NKA ++ L+ A Q
Sbjct: 361 NRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQ 420
Query: 111 M-QIKCLKKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPV 169
Q +++R +A + N+ + AGA+ L +T+ NA+ +
Sbjct: 421 AAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQ--------------- 465
Query: 170 DEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRG-TYESRAYAVLLLKSMLEVAE 228
+ +++ + NL I E KS +M G ++S+ ++ G T E++ A L S+ V E
Sbjct: 466 ENSVTAMLNLSIYEKN-KSRIM-EEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHE 523
Query: 229 PMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXX 288
+ I++ + VE + +L + + + K A+ L N+ N + +E G V
Sbjct: 524 YKKRIAIVDQC-VEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGA 582
Query: 289 XXXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRIL 348
A+ L LL + + G + K + +A + + + E AV L
Sbjct: 583 LKNEGVAEEAAG----ALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAAL 638
Query: 349 LSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHAR 398
L + + S +V +++L+ +A L L + + + KA + ++ R
Sbjct: 639 LELCR-SGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQR 687
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 251 (93.4 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 58/145 (40%), Positives = 84/145 (57%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P FLCPI+L IM DPV + TG TY++ESI+KW AG + TCP T+Q L L PN
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAG-HKTCPKTRQELD-HLSLAPNF 347
Query: 66 TLRRLIQSWCTLNASYGI-ERIPTPKPPINKAQITKLLNEAAKSPQM--QIKCLKKLRSI 122
L+ LI WC N ++ I E+ +P + LL EA S Q+ Q + +K++R +
Sbjct: 348 ALKNLIMQWCEKN-NFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL 406
Query: 123 AAENETNKRCLESAGAVEFLASFVT 147
A EN N+ + +AGA+ L ++
Sbjct: 407 ARENPENRVLIANAGAIPLLVQLLS 431
Score = 99 (39.9 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 50/230 (21%), Positives = 103/230 (44%)
Query: 170 DEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEP 229
+ A++ L NL I E+ K ++ G + ++ +I++ G E+R + L S+ + E
Sbjct: 439 ENAVTTLLNLSIDEVNKK--LISNEGA-IPNIIEILENGNREARENSAAALFSLSMLDEN 495
Query: 230 MQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXX 289
I L + ++ +L H + + K AL L N+ N+ + ++AG V
Sbjct: 496 KVTIGLSNGI-PPLVDLLQ-HGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLL 553
Query: 290 XXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILL 349
+ L++L LL EGR + + + + + + I + + E A +LL
Sbjct: 554 KDKNLGM--IDEALSILLLLASHPEGR-QAIGQLSFIETLVEFIRQGTPKNKECATSVLL 610
Query: 350 SISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARA 399
+ S +S + LQ GV L + + + + + KA +++L +++
Sbjct: 611 ELG--SNNSSFILAALQFGVYEYL-VEITTSGTNRAQRKANALIQLISKS 657
Score = 49 (22.3 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 35/161 (21%), Positives = 69/161 (42%)
Query: 126 NETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLKIS--- 182
+E NK+ + + GA+ + + N N E+ E+S +LS+L K++
Sbjct: 451 DEVNKKLISNEGAIPNIIEILENGN--REA-------RENSAAALFSLSMLDENKVTIGL 501
Query: 183 ELGLKSLV-MGRNGTF---VDSLTQIMQ---RGTYESRAYAVLLLKSMLEVAEPMQLISL 235
G+ LV + ++GT D+LT + + RA +++ +L + + L +
Sbjct: 502 SNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMI 561
Query: 236 RQELFVEVIQVLHDHISQQASK-SALEVLVNICPWGRNRIK 275
+ L + ++ H Q + S +E LV G + K
Sbjct: 562 DEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNK 602
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 286 (105.7 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 89/289 (30%), Positives = 141/289 (48%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P F CPISL +M+DPV V +G TY+R I+KWL +G + TCP T+Q LS LTPN
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSG-HKTCPKTQQPLS-HTSLTPNF 285
Query: 66 TLRRLIQSWCTLNASYGIERIPTPKP-----------PINKAQITKLLNEAAKSPQMQIK 114
L+ LI WC N GIE +P K + A + L+N Q + +
Sbjct: 286 VLKSLISQWCEAN---GIE-LPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQR 341
Query: 115 CLK-KLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEAL 173
++R +A N N+ C+ AGA+ L + +++S+ P R + A+
Sbjct: 342 AAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSD-----P----------RTQEHAV 386
Query: 174 SILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLI 233
+ L NL I E S+V + + + ++++ G+ E+R A L S+ V E I
Sbjct: 387 TALLNLSIHENNKASIV---DSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTI 443
Query: 234 SLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
+ +I +L D S + K A + N+C + N+++ V+AG V
Sbjct: 444 GAAGAI-PPLINLLCDG-SPRGKKDAATAIFNLCIYQGNKVRAVKAGIV 490
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 284 (105.0 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 85/286 (29%), Positives = 140/286 (48%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P F CPISL +M+DPV V +G TY+R IEKW+ G ++TCP T+Q L+S LTPN+
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGG-HSTCPKTQQALTSTT-LTPNY 313
Query: 66 TLRRLIQSWCTLN--------ASYGIERIPTPKPPINKAQITKLLNEAAK-SPQMQIKCL 116
LR LI WC N +S ++ + P +I L+ A +P+ Q
Sbjct: 314 VLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAA 373
Query: 117 KKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSIL 176
++R +A N N+ + AGA+ L ++ +P+ SR + +++ L
Sbjct: 374 GEIRLLAKRNADNRVAIAEAGAIPLLVGLLS-------TPD--------SRIQEHSVTAL 418
Query: 177 CNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLR 236
NL I E ++V G + + Q++++G+ E+R A L S+ + E I
Sbjct: 419 LNLSICENNKGAIVSA--GA-IPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAL 475
Query: 237 QELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
+ + VL + +Q+ K A L N+C + N+ K + AG +
Sbjct: 476 GA--IPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVI 519
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 283 (104.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 85/287 (29%), Positives = 141/287 (49%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P +F CPISL +MKDPV V TG TY+R SI+KWL AG + TCP +++ L LTPN+
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAG-HKTCPKSQETLL-HAGLTPNY 305
Query: 66 TLRRLIQSWCTLNA-----SYGIERIP----TPKPPINKAQITKLLNEAAK-SPQMQIKC 115
L+ LI WC N + G R + ++ + LL + A + + Q
Sbjct: 306 VLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAA 365
Query: 116 LKKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSI 175
+LR +A N N+ C+ AGA+ L ++ SP+ R + +++
Sbjct: 366 AGELRLLAKRNVDNRVCIAEAGAIPLLVELLS-------SPD--------PRTQEHSVTA 410
Query: 176 LCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISL 235
L NL I+E G K ++ G D + ++++ G+ E+R A L S+ + E I
Sbjct: 411 LLNLSINE-GNKGAIVDA-GAITD-IVEVLKNGSMEARENAAATLFSLSVIDENKVAIGA 467
Query: 236 RQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
+ +I +L + +++ K A + N+C + N+ + V+ G V
Sbjct: 468 AGAIQA-LISLLEEG-TRRGKKDAATAIFNLCIYQGNKSRAVKGGIV 512
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 183 (69.5 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 1 MEEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECE 60
+E ++P+ F+CPISL M+DPVT+ TG TY+R +I KW G + TCP T Q L +
Sbjct: 55 LELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIG-HCTCPTTMQELWDDL- 112
Query: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLR 120
+TPN TL +LI +W + Y + + + +I L +A + ++ L +L+
Sbjct: 113 VTPNKTLHQLIYTW--FSQKYVLMKKRSEDVQGRAIEILGTLRKA--KGKAKVHALSELK 168
Query: 121 SIAAENETNKRCLESAGAVEFLASFVT 147
+ + K+ + G V ++S ++
Sbjct: 169 QVVMAHAIAKKTVVDEGGVFVISSLLS 195
Score = 141 (54.7 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 61/235 (25%), Positives = 106/235 (45%)
Query: 171 EALSILCNLKISELGLKSLVM-GRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAE- 228
EA++IL NL++ L+ R VD L G+ E++ L+ ++E
Sbjct: 205 EAIAILVNLELDSDSKAGLMQPARVSLMVDMLND----GSIETKINCARLIGRLVEEKGF 260
Query: 229 PMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXX 288
+L+S L V +++++ D + AL +L ++ + R V GAV
Sbjct: 261 RAELVS-SHSLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDV 319
Query: 289 XXXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRIL 348
E E L VLD LC +EGR L + + +++VS+ + A+ IL
Sbjct: 320 LPCLDVE--CLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISIL 377
Query: 349 LSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKNS 403
S+ K A+ +++G+ AKL LV+Q K ++ E+LKL + + +S
Sbjct: 378 WSVCKL-ASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKLCSLHYSDS 431
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 242 (90.2 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 80/283 (28%), Positives = 135/283 (47%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
++VP F+C +S IM +PV + +G TY++ I +WL TCP TKQVLS + P
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL--KHERTCPKTKQVLSHRLWI-P 126
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPK--PPINKAQITKLLNEAAKSPQM--QIKCLKKL 119
NH + LI WC +N Y ++ P+ + + + I LL + S + QI+ K+L
Sbjct: 127 NHLISDLITQWCLVN-KYDHQK-PSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKEL 184
Query: 120 RSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNL 179
R + N R AG + + ++ + ++E+ + L E+ ++ L NL
Sbjct: 185 RH-QTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQEN------IVTALFNL 237
Query: 180 KISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQEL 239
I E V+ N + LT+ +++GT E+R A L S L + ++I E
Sbjct: 238 SILESN--KTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSS-LSAIDSNKIIIGNSEA 294
Query: 240 FVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
+I ++ + A+K A + N+C N+ K V AG +
Sbjct: 295 VKALIDLIEEG-DLLATKEATSTVFNLCIVLENKGKVVSAGLI 336
Score = 58 (25.5 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 300 EMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATNS 359
E TV +L C E + +++ AGL + K ++ E +L ++ S N
Sbjct: 312 EATSTVFNL-CIVLENKGKVVS--AGLIHAATKKIKAGSNVDE----LLSLLALISTHNR 364
Query: 360 VLQEMLQIGVVAKLCLVLQVDNSMKTKDKA 389
++EM ++G + L +L+ +S+ T + A
Sbjct: 365 AVEEMDKLGFIYDLFSILRKPSSLLTGENA 394
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 249 (92.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 83/291 (28%), Positives = 142/291 (48%)
Query: 1 MEEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECE 60
+ + ++P F CPI+L +M+DPV V TG TYDRESI+ W+ +G +NTCP T QVL
Sbjct: 269 LSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSG-HNTCPKTGQVLK-HTS 326
Query: 61 LTPNHTLRRLIQSWCT-------LNASYGIERIPTPKP-PINKAQITKLLNEAAKSPQMQ 112
L PN L+ LI WC L G E P + K ++ L+ + + +
Sbjct: 327 LVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNG 386
Query: 113 IKCLKKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEA 172
+ + +LR++A + + C+ AGA+ L ++ E P S ++
Sbjct: 387 V--VFELRALAKSDTVARACIAEAGAIPKLVRYLAT-----ECP---------SLQINAV 430
Query: 173 LSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRG-TYESRAYAVLLLKSMLEVAEPMQ 231
+IL NL I E K+ +M +G ++ + ++++ G T+E++A A L S+ V+ +
Sbjct: 431 TTIL-NLSILEQN-KTRIMETDGA-LNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRR 487
Query: 232 LISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
+ R+ V + L + + AL ++N+ N + VEAG +
Sbjct: 488 RLG-RKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAGVM 537
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 220 (82.5 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 77/272 (28%), Positives = 130/272 (47%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
++VP F C +S IM DPV + +G TY++ I +WL + TCP KQVL C LTP
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL--NHDLTCPTAKQVLYRVC-LTP 128
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIA 123
NH + LI WC N Y +R P PKP + +T+L + +S +I S+A
Sbjct: 129 NHLINELITRWCLAN-KY--DR-PAPKPS-DIDYVTELFTDGIESLLQRISSPSS--SVA 181
Query: 124 AENETNKR-CLESAGAV---EFLASFVTNSNAMEESPEGF--DNLHESSRPVDEALSILC 177
+ E K L++ V +F + +S +P D + + + ++ L
Sbjct: 182 DQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALF 241
Query: 178 NLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLI--SL 235
N+ E V+ N + L + M++G+ +R A L L S+ ++ +I S+
Sbjct: 242 NMSTFEKN--KTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSV 299
Query: 236 RQELFVEVIQVLHDHISQQASKSALEVLVNIC 267
+ +++I L D +S A+ AL ++++C
Sbjct: 300 ALKALIDLIGELDD-LS--ATHDALCAVIDLC 328
Score = 64 (27.6 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 24/105 (22%), Positives = 50/105 (47%)
Query: 300 EMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATNS 359
+ + V+DL C E + + GLA + K ++ A L +++ S
Sbjct: 319 DALCAVIDLCCDERENWKKAIS--LGLAPAAIKNIK----ARRNLFESLAALALISPHER 372
Query: 360 VLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVL-KLHARAWKNS 403
V+QE+ +GV+ L +L+ + M T + A ++ ++A++ + S
Sbjct: 373 VIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYAKSRERS 417
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 238 (88.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 87/291 (29%), Positives = 134/291 (46%)
Query: 1 MEEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECE 60
+E + P F CP+S +M+DPV + +G TYD+ I+KWL +G N TCP T+QVL
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSG-NRTCPKTQQVLPHTA- 126
Query: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPP-INKAQ-ITKLLNEAAKSPQMQIKC--L 116
LTPN +R +I WC N G+E P +N+ + +T+ E S ++ L
Sbjct: 127 LTPNLLIREMISKWCKKN---GLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNL 183
Query: 117 KKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEAL--- 173
+ +S A E R L G EF A F + +E + L S P DE L
Sbjct: 184 QDQKSAAKE----LRLLTRKGT-EFRALF---GESPDEITRLVNPLLHGSNP-DEKLQED 234
Query: 174 --SILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQ 231
+ L N+ I + K LV N + L ++RGT +R+ A + ++ +
Sbjct: 235 VVTTLLNISIHDDSNKKLVC-ENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKV 293
Query: 232 LISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
LI + + +I +L + + A K + +C NR + V GAV
Sbjct: 294 LIG-KSGILKPLIDLLEEG-NPLAIKDVAAAIFTLCIAHENRSRAVRDGAV 342
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 184 (69.8 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 36/75 (48%), Positives = 50/75 (66%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I +P +F CP+S +M DPV V +G T+DR SI+KWL G CP T+QVL+ + EL P
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLA-VCPRTRQVLTHQ-ELIP 293
Query: 64 NHTLRRLIQSWCTLN 78
N+T++ +I SW N
Sbjct: 294 NYTVKAMIASWLEAN 308
Score = 103 (41.3 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 51/229 (22%), Positives = 100/229 (43%)
Query: 170 DEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEP 229
+ A++ L NL ISEL K++++ G ++ L ++ G ++ + L S+ +
Sbjct: 532 EHAVTALLNLSISELN-KAMIV-EVGA-IEPLVHVLNTGNDRAKENSAASLFSLSVLQVN 588
Query: 230 MQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXX 289
+ I ++ +L + + K A L N+ N+ + V+A AV
Sbjct: 589 RERIGQSNAAIQALVNLLGKG-TFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL 647
Query: 290 XXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILL 349
+ + + +L L EGR +++ G G+ ++ + + SQ E A +LL
Sbjct: 648 DP---DLEMVDKAVALLANLSAVGEGRQAIVREG-GIPLLVETVDLGSQRGKENAASVLL 703
Query: 350 SISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHAR 398
+ S L +LQ G + L + L + + K+KA+++L H R
Sbjct: 704 QLCLNSPKFCTL--VLQEGAIPPL-VALSQSGTQRAKEKAQQLLS-HFR 748
Score = 53 (23.7 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 169 VDEALSILCNLKISELGLKSLVM-GRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVA 227
VD+A+++L NL G +++V G V+++ QRG + A +VLL L +
Sbjct: 654 VDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRG--KENAASVLL---QLCLN 708
Query: 228 EPMQLISLRQELFVEVIQVLHDHISQQASKSALEVL 263
P + QE + + L +Q+A + A ++L
Sbjct: 709 SPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 39 (18.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 126 NETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSIL-CNL-KI-- 181
+E NK + GA+E L + N D E+S +LS+L N +I
Sbjct: 544 SELNKAMIVEVGAIEPLVHVLNTGN---------DRAKENSAASLFSLSVLQVNRERIGQ 594
Query: 182 SELGLKSLV--MGRNGTF---VDSLTQIMQRG-TYESRAYAVLL--LKSMLEVAEP 229
S +++LV +G+ GTF D+ + + T++++A V +K ++E+ +P
Sbjct: 595 SNAAIQALVNLLGK-GTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDP 649
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 221 (82.9 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 107/421 (25%), Positives = 184/421 (43%)
Query: 11 LCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRL 70
LCPISL IM DPV + TG TYDR SI KW +G N TCP+T ++L+S EL N ++R++
Sbjct: 293 LCPISLEIMTDPVVIETGHTYDRSSITKWFGSG-NITCPITGKILTST-ELVDNVSVRQV 350
Query: 71 IQSWCTLNASY--GIER--------IPTPKPPINKAQ-ITKLL-NEAAKSPQMQI-KCLK 117
I+ C N GI R +P + I K L +E + I + ++
Sbjct: 351 IRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVR 410
Query: 118 KLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILC 177
++R + N+ CL AGAV L +++ + R + A++ +
Sbjct: 411 EIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDI---------------RIQENAMAGIL 455
Query: 178 NLKISELGLKSLVMGRNGTFVDSLTQIMQRGTY-ESRAYAVLLLKSMLEVAEPMQLISLR 236
NL G KS + G + L +I+ G E+R Y+ L + V + +LI
Sbjct: 456 NLSKHVTG-KSKIAGEG---LKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGEN 511
Query: 237 QELFVEVIQVLH-DHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXE 295
+ ++ ++ D A +SAL ++ + N + + AGAV
Sbjct: 512 PDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEIS 571
Query: 296 RRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQ---VA-SERAVRILLSI 351
+ L L L + +G +++ G GL + + KIL S+ VA + V ++L++
Sbjct: 572 GGLTADCLATLAKLAEYPDGTIGVIRRG-GLKL-AVKILSSSEDSPVAVKQHCVGLILNL 629
Query: 352 SKFSATNSVLQEMLQIGVV-AKLCLVLQVDNSMKTKDKAREVLKLHARAWKNSPCVPENL 410
+ V+ +++ +V L VL +K + + +H + + V NL
Sbjct: 630 C-LNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHEFQERKTGSVEPNL 688
Query: 411 R 411
+
Sbjct: 689 Q 689
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 215 (80.7 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 86/327 (26%), Positives = 160/327 (48%)
Query: 83 IERIPTPK---PPINKAQITKLL-NEAAKSPQMQ-IKCLKKLRSIAAENETNKRCLESAG 137
IERI +P+ P + +I++ L N AA+ + ++ + K++++ +TNK+CL G
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99
Query: 138 AVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCN---LKISELGLKSLVMGRN 194
+V L+S A + H R ++E L +L + L SE G MG
Sbjct: 100 SVLALSSCFERFAAARDG-------H--MRLLEEILFVLSSWLPLNRSE-GFNK--MGST 147
Query: 195 GTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQELFVE-VIQVLHDHISQ 253
+ ++ L + + ++R A ++ ++ V + E E +++++ D +S
Sbjct: 148 AS-LNCLVRFLNGKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRDSVST 206
Query: 254 QASKSALEVLVNICPWGRNRI--KGVEAGAVXXXXXXXXXXXXERRASEMILTVLDLLCQ 311
++K++L V+ ++I K V+ G V E+ E L VL+ C
Sbjct: 207 SSTKASLMVIYRAIS-SNDKITEKFVKLGLVELITEMMVNNA-EKSVCERSLVVLNATCD 264
Query: 312 CAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFS----ATNSVLQEMLQI 367
+G+ ++L++ + ++ KKILRVS +A++ +V IL + K + +L E LQ+
Sbjct: 265 NEQGKEDVLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQV 324
Query: 368 GVVAKLCLVLQVDNSMKTKDKAREVLK 394
G KL ++LQV KTK+KA E+L+
Sbjct: 325 GAFEKLLVLLQVGCEDKTKEKASELLR 351
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 213 (80.0 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 74/224 (33%), Positives = 113/224 (50%)
Query: 3 EIDVPTFFL-CPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECEL 61
++ VP L CPISL +M DPV + +G TY+R IEKW F+ +NTCP T Q LS C L
Sbjct: 275 QMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKW-FSDGHNTCPKTHQQLSHLC-L 332
Query: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPP---INKAQITKLLNEAA--KSPQMQIKC- 115
TPN+ ++ LI SWC N G++ +P P +N ++ ++E+ +S + C
Sbjct: 333 TPNYCVKALISSWCEQN---GVQ-VPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCK 388
Query: 116 LKKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEE---SPEGFDNLHESSRPVDEA 172
LK ++ + E + E A E+ VT E + D L + R V++
Sbjct: 389 LKDVKVVPLEESGTIK--EEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQ- 445
Query: 173 LSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYA 216
+ +L LK E ++MG NG V++L Q + E+ A A
Sbjct: 446 IRVL--LKDDEEA--RILMGENGC-VEALLQFLGSALNENNASA 484
Score = 51 (23.0 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 30/131 (22%), Positives = 59/131 (45%)
Query: 220 LKSMLEVAE-PMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVE 278
L S+ ++ P + L V +Q L Q+ ++ +L VL+N+ + + V
Sbjct: 571 LHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVS 630
Query: 279 AGAVXXXXXXXXXXXXERRASEMILTVLDLLCQCAEGRAEL-LKHGAGLAIVSKKILRVS 337
A ++ E E +++L +LC +E +E+ L+ G ++VS + +
Sbjct: 631 APSLVSNLCTILDTG-EPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISV-NGT 688
Query: 338 QVASERAVRIL 348
Q ERA ++L
Sbjct: 689 QRGRERAQKLL 699
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 191 (72.3 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 74/285 (25%), Positives = 132/285 (46%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
++VP F+C +S IM +P+ + +G T+++ I +WL TCP TKQVL + P
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWL--KHERTCPRTKQVLYHRF-MIP 119
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPPIN--KAQITKLLNEAAK--SPQMQIKCLKKL 119
NH + +I+ WC + + +R T I+ + LL + S + Q + K+L
Sbjct: 120 NHLINEVIKEWCLI---HNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKEL 176
Query: 120 RSIAAENETNKRCLESAGAV-EFLASFVTNSNAMEES-PEGFDNLHESSRPVDEALSILC 177
++ A+ ++ C+ + + + +T + E+S PE +N + AL I
Sbjct: 177 -ALKAKRFSSV-CVYFVAKIPDSITRLLTPLSISEDSNPEFLEN-------IVTALHIFS 227
Query: 178 NLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQ 237
SE K+LV N + L + M++GT +R ++ + S L + ++I
Sbjct: 228 T---SEKN-KTLV-AENPLVLPLLAKYMKQGTVLTRIHSAATVNS-LSYTDSNKIIIGNS 281
Query: 238 ELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAV 282
E+ +I V+ + S A+ A L N+CP K V G +
Sbjct: 282 EVLKALIHVIEEGDSL-ATSEAFSALSNLCPVKEISEKAVSEGLI 325
Score = 59 (25.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 18/77 (23%), Positives = 42/77 (54%)
Query: 329 VSKKILR--VSQVASERAVRILLSISKFSATNS--VLQEMLQIGVVAKLCLVLQVDNSMK 384
VS+ ++R + ++ + V +LLS+ F +T + +EM +G++ L +L+ NS+
Sbjct: 320 VSEGLIRAAIKKIKAGSNVSMLLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLV 379
Query: 385 TKDKAREVLKLHARAWK 401
+ A ++ +++K
Sbjct: 380 NDENAVVIVYNICKSYK 396
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 209 (78.6 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 88/355 (24%), Positives = 163/355 (45%)
Query: 12 CPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLI 71
CPISL IM DPV + +G TYDR SI KW FA N TCP T + L S L N +++++I
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKW-FASGNITCPKTGKTLVSTV-LVDNFSVKQVI 341
Query: 72 QSWCTLNA----SYGIERIPTPKP-PINKA-QITK--LLNEAAKSPQMQ-IKCLKKLRSI 122
QS+ N G +++ + +A ++T L E K + + +K L ++R +
Sbjct: 342 QSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRIL 401
Query: 123 AAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLKIS 182
+ + CL AG VE L + + + P R + A++ + NL
Sbjct: 402 TKTSTFYRSCLVEAGVVESLMKILRS-----DDP----------RIQENAMAGIMNLS-K 445
Query: 183 ELGLKSLVMGRNGTFVDSLTQIMQRGTY-ESRAYAVLLLKSMLEVAEPMQLISLRQELFV 241
++ K+ ++G +G + + +++ G ESR YA L + + + +LI +
Sbjct: 446 DIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIP 505
Query: 242 EVIQVLHD-HISQQASKSALEVLVNICP-WGRNRIKGVEAGAVXXXXXXXXXXXXERRAS 299
+++++ A ++AL + ++ N + + AG V +
Sbjct: 506 GLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVT 565
Query: 300 EMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVA---SERAVRILLSI 351
+ +L + + +G +L+ G GL + + KIL S+V+ + V +LL++
Sbjct: 566 ADSMAILAKMAEYPDGMISVLRRG-GLKL-AVKILGSSEVSPATKQHCVALLLNL 618
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 201 (75.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 70/233 (30%), Positives = 116/233 (49%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P F CPISL IM DPV + +G T+DR SI++W+ +G N TCP+TK LS L PN
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSG-NRTCPITKLPLSETPYLIPN 62
Query: 65 HTLRRLIQSWC--TLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSI 122
H LR LI ++ +L S ++A I+ L+++++ + +++ L +L +
Sbjct: 63 HALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNAS-KLESLTRLVRL 121
Query: 123 AAENETNKRCLESAGAVEFLASFVTNSNAM--EESPEGFDNLH-ESSRPV----DEALS- 174
+ + +R + +GAV V + N + E+S NL E V D +
Sbjct: 122 TKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIRR 181
Query: 175 ILCNLKISELGLKSLVMGRNGTFVDSLTQI-MQRGTYESRAYAVLLLKSMLEV 226
I+ L++ K++ T + SL + + + T S A+ L S+L V
Sbjct: 182 IVTVLRVGSPDCKAIA----ATLLTSLAVVEVNKATIGSYPDAISALVSLLRV 230
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 205 (77.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 99/416 (23%), Positives = 182/416 (43%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
VP F CPISL +M+DPV TG TYDR SI +W+ G ++TCP + Q L+ L PN
Sbjct: 297 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEG-HSTCPNSGQTLADH-RLVPNR 354
Query: 66 TLRRLIQSWCTLNASYGIERIPTPKPPINKAQI------TKLLNEAAKSP-QMQIKCL-- 116
LR LI WC + YG++ +P+ A+ ++ EA K+ ++ ++ L
Sbjct: 355 ALRSLISQWCGV---YGLQ-YDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLED 410
Query: 117 ----------KKLRSIAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESS 166
K++R +A + N+ + GA+ L + +++ M +
Sbjct: 411 GSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQ------------ 458
Query: 167 RPVDEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRG-TYESRAYAVLLLKSMLE 225
+ A++ L NL I E K +M + G + + ++Q G T E++ A L S L
Sbjct: 459 ---ENAVTALLNLSIFEPN-KGRIMEQEGC-LRLIVGVLQNGWTTEAKENAAATLFS-LS 512
Query: 226 VAEPMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXX 285
V + + + + VE + + + + K A+ L N+ + + +E+ AV
Sbjct: 513 VVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVAL 572
Query: 286 XXXXXXXX-XERRASEMILTVLDLLCQCAEGRAE-LLKHGAGLAIVSKKILRVSQVASER 343
E A + L + G +E ++ GL + R + E
Sbjct: 573 IQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGL------MRRGTPKGKEN 626
Query: 344 AVRILLSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARA 399
AV L I + + +++Q + +I + + + ++ + + K KA ++K+ R+
Sbjct: 627 AVSALYEICRRGGS-ALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRS 681
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 202 (76.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P CPISL +M DPV + +G TY+R IEKW F+ +N+CP T+Q L LTPN+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKW-FSDGHNSCPKTQQQLP-HLSLTPNYC 333
Query: 67 LRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIAAEN 126
++ LI SWC N GI +PT P +L ++SP K + + +
Sbjct: 334 VKGLIASWCEQN---GIT-VPTGPPESLDLNYWRLAMSDSESPNS--KSVDSV-GLCTPK 386
Query: 127 ETNKRCLESAGAVEFLASFVTNSNAMEESP------EGFDNLH---ESSRPVDEALSILC 177
+ LE + +E +NA +E EG+ ++ + + + ++
Sbjct: 387 DIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVE 446
Query: 178 NLKI--SELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYA 216
N++I + ++MG NG FV++ Q ++ +++ A A
Sbjct: 447 NVRILLKDNEEARILMGANG-FVEAFLQFLESAVHDNNAAA 486
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 196 (74.1 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 65/229 (28%), Positives = 106/229 (46%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P+ F+CPISL M+DPVT+ TG TY+R +I KW G + TCP T Q L + +TPN
Sbjct: 63 DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLG-HLTCPTTMQELWDDT-VTPN 120
Query: 65 HTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIAA 124
TL LI +W + Y + + + +I L +A Q ++ L +L+ I
Sbjct: 121 KTLHHLIYTW--FSQKYVLMKKRSEDVQGRAIEILGTLKKA--KGQARVHALSELKQIVI 176
Query: 125 ENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILCNLKISEL 184
+ ++ + G V ++S + + E L D ++ K+S L
Sbjct: 177 AHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVS-L 235
Query: 185 GLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLI 233
+ L G N T ++ I RG E + + L+ S + M+L+
Sbjct: 236 IVDMLNDGSNETKINCARLI--RGLVEEKGFRAELVSSHSLLVGLMRLV 282
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 56/226 (24%), Positives = 99/226 (43%)
Query: 171 EALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAE-P 229
E ++IL +L + L+ V + ++ G+ E++ L++ ++E
Sbjct: 209 EVVAILVSLDLDSDSKSGLMQPAK---VSLIVDMLNDGSNETKINCARLIRGLVEEKGFR 265
Query: 230 MQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXX 289
+L+S L V +++++ D + AL +L I + R V GAV
Sbjct: 266 AELVS-SHSLLVGLMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDIL 324
Query: 290 XXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILL 349
E E+ L VLD LC EGR + + + ++RVS+ + A+ IL
Sbjct: 325 PSLDPE--CLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILW 382
Query: 350 SISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKL 395
S+ K A +++G+ AKL LV+Q K ++ E+LKL
Sbjct: 383 SVCKL-APEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 72/225 (32%), Positives = 106/225 (47%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P CPISL +M DPV + +G TY+R IEKW F+ +NTCP T+Q L LTPN+
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKW-FSDGHNTCPKTQQQLP-HISLTPNNC 330
Query: 67 LRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLL---NEAAKSPQMQIKCLKKLRS-- 121
++ LI SWC N + +IP+ P +L +E+ KS + KL+
Sbjct: 331 VKGLIASWCEQNGT----QIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVK 386
Query: 122 IAAENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPV---DEALSILCN 178
I E +E E SFV++ + E+S ++ V +E L C
Sbjct: 387 IVPLEENGTTVVERQNTEE---SFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCK 443
Query: 179 L--KISELGLKS-----LVMGRNGTFVDSLTQIMQRGTYESRAYA 216
+ KI L LK + MG NG FV++L + + ++ A A
Sbjct: 444 VVEKIRLL-LKDDEEARIFMGANG-FVEALLRFLGSAVDDNNAAA 486
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 168 (64.2 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 10 FLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRR 69
F CP+SL +M DPV V +G TY++ I++W+ G CP T+Q L+ L PN+T++
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLK-VCPKTRQTLT-HTTLIPNYTVKA 294
Query: 70 LIQSWCTLNASYGIERIPTPKPPINKAQITKLLN 103
LI +WC N ++P P + +++ LL+
Sbjct: 295 LIANWCETNDV----KLPDPNKSTSLNELSPLLS 324
Score = 59 (25.8 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 95 KAQITKLLNEAAKSP-QMQIKCLKKLRSIAAENETNKRCLESAGAVEFLASFV--TNSNA 151
+ Q+ KL+ E S Q + +LR +A N N+ + ++GA+ L + T+S
Sbjct: 543 ETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSAT 602
Query: 152 MEESPEGFDNL 162
E + NL
Sbjct: 603 QENAVTALLNL 613
Score = 52 (23.4 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 126 NETNKRCLESAGAVEFLASFVTN--SNAMEES 155
N+ NK+ + AGA+E L + N S A E S
Sbjct: 616 NDNNKKAIADAGAIEPLIHVLENGSSEAKENS 647
Score = 52 (23.4 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 41/208 (19%), Positives = 90/208 (43%)
Query: 189 LVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLRQELFVEVIQVLH 248
+V+G +G V L +++ ++ AV L + L + + + +I VL
Sbjct: 580 IVIGNSGAIV-LLVELLYSTDSATQENAVTALLN-LSINDNNKKAIADAGAIEPLIHVLE 637
Query: 249 DHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXERRASEMILTVLDL 308
+ S +A +++ L ++ N+IK ++GA+ R + T L
Sbjct: 638 NG-SSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTP--RGKKDAATALFN 694
Query: 309 LCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKF-SATNSVLQEMLQI 367
L E +A +++ GA ++ V ++AV +L +++ N++ QE
Sbjct: 695 LSIHQENKAMIVQSGAVRYLIDLMDPAAGMV--DKAVAVLANLATIPEGRNAIGQE---- 748
Query: 368 GVVAKLCLVLQVDNSMKTKDKAREVLKL 395
G + L V+++ ++ ++ A +L+L
Sbjct: 749 GGIPLLVEVVELGSARGKENAAAALLQL 776
Score = 46 (21.3 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 160 DNLHESSRPVDEALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTY---ESRAYA 216
D + ++ VD+A+++L NL G ++ G+ G + L ++++ G+ E+ A A
Sbjct: 716 DLMDPAAGMVDKAVAVLANLATIPEGRNAI--GQEGG-IPLLVEVVELGSARGKENAAAA 772
Query: 217 VLLLKS 222
+L L +
Sbjct: 773 LLQLST 778
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 133 (51.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 2 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIE--KWL-FAGKNNTCPMTKQVLSSE 58
+E P FLCPIS ++M DPV V +G T++R ++ + L F K N ++ L
Sbjct: 29 QEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLND---DEESLPDF 85
Query: 59 CELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKK 118
+ PN ++ I +WC + G+ R P+PP + + + ++L + P ++I+ ++
Sbjct: 86 SNIIPNLNMKSTIDTWCD---TVGVSR---PQPP-DYSTVERILRQQMPPPDVEIRVSEQ 138
Query: 119 --LRSIA--AENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRP 168
LR++A A + E G +F S ++ ++ + F L ++RP
Sbjct: 139 ELLRAVAHRAPMIIHHADSELMGRRDFNNSTTSSDESVIVAHSPFTPLPLTTRP 192
Score = 92 (37.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 56/237 (23%), Positives = 103/237 (43%)
Query: 172 ALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSM-LEVAE-- 228
AL+ L NL + + ++V R G FV L +++ G+ E++ +A + S+ LE
Sbjct: 286 ALASLVNLSLDKKNKLTIV--RLG-FVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKM 342
Query: 229 PMQLISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXX 288
P+ ++ Q L + D ++ + + +N NR K V GAV
Sbjct: 343 PIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLN----QTNRSKLVRLGAVPALFSM 398
Query: 289 XXXXXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSK---------KILRVSQV 339
RA +L + +L C C+EGR+ +L A +V K R S
Sbjct: 399 VRSGESASRA---LLVICNLAC-CSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSS 454
Query: 340 ASERAVRILLSISKFSAT-NSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKL 395
A E V L ++S S + +E + V+ ++ + + + ++KA+++L+L
Sbjct: 455 ARENCVAALFALSHESLRFKGLAKEARAVEVLKEV----EERGTERAREKAKKILQL 507
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 178 (67.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 76/328 (23%), Positives = 138/328 (42%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
+ VP+ F C +SL +M DPV V +G T++R I+KW+ G CP T+Q LS LTP
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLM-VCPKTRQALS-HTTLTP 295
Query: 64 NHTLRRLIQSWCTLNASYG---IERIPTPKP-PINKAQITKLLNEAAKSPQMQIKCLKKL 119
N +R + SWC N Y +E I + +P P+ + +E S + + L+++
Sbjct: 296 NFIVRAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQV 355
Query: 120 --RSIAAENETNKRCLESAGAVEFLAS-FVTNSNAMEESPEGFDNLHESSRPVDEALSIL 176
RS +A ++ ++ A +T SN + PE H P
Sbjct: 356 FSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPAT------ 409
Query: 177 CNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLISLR 236
+ E G S + T V L ++ + +++ A ++ + + +++ R
Sbjct: 410 ----VRETGSSSSIE----TEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIAR 461
Query: 237 QELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXXXXXER 296
E ++ +L+ ++ A+ L+N+ N+ E+GA+ E
Sbjct: 462 CEAIPSLVSLLYS-TDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEE 520
Query: 297 RASEMILTVLDLLCQCAEGRAELLKHGA 324
+ T+ L E + E+ + GA
Sbjct: 521 AKANSAATLFSLSV-IEEYKTEIGEAGA 547
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 143 (55.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P F C +S +M DPV + +G T++R I+KW G N++CP++K+ L + L PN
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEG-NDSCPISKRKLD-DFTLKPNV 276
Query: 66 TLRRLIQSWCTLN 78
L+ I WC N
Sbjct: 277 ELKSQISEWCAKN 289
Score = 73 (30.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 132 CLESAGAVEFLASFVTNSNAMEESPE---GFDNLHESSRPVDE--ALSILCNLKISELGL 186
C S ++ L S + E+P+ L ES+ P ++ A+SIL L + ++
Sbjct: 559 CKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEY 618
Query: 187 KSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEV---AEPMQLISLRQE 238
LV+ SL I GT E + A LL++++EV E + +S R E
Sbjct: 619 CCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEVSSRPE 673
Score = 55 (24.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/80 (21%), Positives = 41/80 (51%)
Query: 299 SEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATN 358
+E L +L++L G +++ G+ L+ + K + ++ E+A ++++ S++
Sbjct: 479 AEEALNILEVLSNHPHGPSKITSSGS-LSSLLKIVESQAEHLQEQA---MITLKNLSSSM 534
Query: 359 SVLQEMLQIGVVAKLCLVLQ 378
+ EM+ + + KL LQ
Sbjct: 535 EICLEMVSLDFIQKLTSFLQ 554
Score = 45 (20.9 bits), Expect = 8.9e-07, Sum P(3) = 8.9e-07
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 303 LTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLS--ISKFSATNSV 360
+ +L LC +GR + + LA +++ + E A+ ILL + K V
Sbjct: 563 IIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLV 622
Query: 361 LQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVLK 394
++E I + L L+ + + + K A E+L+
Sbjct: 623 VREATDI--YSSLILISN-NGTEEVKVSASELLR 653
Score = 41 (19.5 bits), Expect = 8.9e-07, Sum P(3) = 8.9e-07
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 234 SLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRI 274
SL +E+F L + + + + LEVL N P G ++I
Sbjct: 460 SLEEEVFKMFSVFLESEVVAEEALNILEVLSNH-PHGPSKI 499
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 298 ASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSIS 352
A E+I LDLL G ++ + S+V +E A+ IL +S
Sbjct: 436 AGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESEVVAEEALNILEVLS 490
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 2 EEIDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECEL 61
E + P +F+CPISL +MKDP G TY+ E+I WL G + T PMT L +L
Sbjct: 321 EHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGG-HETSPMTNTKLH-HTKL 378
Query: 62 TPNHTLRRLIQSWCTLNASY 81
PN LR IQ W ++S+
Sbjct: 379 VPNLALRSAIQEWLHASSSF 398
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 160 (61.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 32/72 (44%), Positives = 41/72 (56%)
Query: 10 FLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRR 69
F CPIS+ IM+DP G TY+ E KWL +G T P T + L + L PNHTLR
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSG-GRTSPKTNKPLENH-NLVPNHTLRI 294
Query: 70 LIQSWCTLNASY 81
+I+ W N +Y
Sbjct: 295 IIKDWLEKNPNY 306
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 164 (62.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
++P F+CPI+ +MKDP+ G +Y++E++E W+ + K T PMT VLSS LTPN
Sbjct: 402 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWI-SRKKRTSPMTNLVLSSVI-LTPN 459
Query: 65 HTLRRLIQSW 74
TL+ I W
Sbjct: 460 RTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 164 (62.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
++P F+CPI+ +MKDP+ G +Y++E++E W+ + K T PMT VLSS LTPN
Sbjct: 403 EIPDEFICPITRELMKDPIIASDGYSYEKEAMENWI-SRKKRTSPMTNLVLSSVI-LTPN 460
Query: 65 HTLRRLIQSW 74
TL+ I W
Sbjct: 461 RTLKMAIDRW 470
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P FLCPI+ IMKDPV G +Y+RE+IE W+ + KN T PMT L + LTPN T
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWI-STKNRTSPMTNLPLQTTL-LTPNRT 475
Query: 67 LRRLIQSWCT 76
L+ I W T
Sbjct: 476 LKMAIFRWST 485
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 112 (44.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 50/186 (26%), Positives = 88/186 (47%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIE---KWLFAGKNNTCPMTKQVLSSECEL 61
+ PT FLCPI+ +M DPV V +G T++R S++ FA K + T+ LS+ +
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDG--TQPDLST---V 63
Query: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKS--PQMQIKCLK-K 118
PN ++ I SWC N ++ P+PP + A + ++ S P + K +
Sbjct: 64 IPNLAMKSTILSWCDRN------KMEHPRPP-DYAYVEGVVRTRMDSLPPGSGHRIAKSE 116
Query: 119 LRSIAAENETNKRCLESA-GAVEFLASFVTNSNAMEESPEGFDNLHESSRPVDEALSILC 177
+ AEN + +S GA+ + T+ ++ P LH++ RP++ + I
Sbjct: 117 ILPPVAENSNSNSDYDSVMGAIRSRSR--TSLSSTTSLP-----LHQT-RPINHSTRIQS 168
Query: 178 NLKISE 183
+ S+
Sbjct: 169 SFSTSD 174
Score = 98 (39.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 53/227 (23%), Positives = 104/227 (45%)
Query: 172 ALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQ 231
A SI+ NL + + +V R+G FV L +++ G+ E++ + + L S+ E
Sbjct: 246 AASIV-NLSLEKPNKLKIV--RSG-FVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKM 301
Query: 232 LISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXX 291
+I + + ++ L S++A + A L ++ NR + V+AGAV
Sbjct: 302 VIGVLGAV-EPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRS 360
Query: 292 XXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVR--ILL 349
R IL +L L C+EG+ +L G ++I+ K+ S+ A R +
Sbjct: 361 GESASR----ILLLLCNLAACSEGKGAMLD-GNAVSILVGKLRESGGAESDAAARENCVG 415
Query: 350 SISKFSATNSVLQEML-QIGVVAKLCLVLQVDN-SMKTKDKAREVLK 394
++ S N + + + G L +++ ++ S + K+KA ++L+
Sbjct: 416 ALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQ 462
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 110 (43.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 54/226 (23%), Positives = 102/226 (45%)
Query: 172 ALSILCNLKISELGLKSLVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQ 231
A S++ NL + + +V R+G FV L +++ GT E++ + L S+ E
Sbjct: 297 AASVV-NLSLEKQNKVKIV--RSG-FVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKM 352
Query: 232 LISLRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGVEAGAVXXXXXXXXX 291
+I + + ++ L S++A + A L ++ NR + V AGAV
Sbjct: 353 VIGVLGAV-EPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRS 411
Query: 292 XXXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRV----SQVASERAVRI 347
R IL VL L C +G+ +L G +AI+ K+ V S+ A E V +
Sbjct: 412 GDSTSR----ILLVLCNLAACPDGKGAMLD-GNAVAILVGKLREVGGGDSEAARENCVAV 466
Query: 348 LLSISKFSATNSVLQEMLQIGVVAKLCLVLQVDNSMKTKDKAREVL 393
LL++ + N + + ++ + ++ + + + K+KA ++L
Sbjct: 467 LLTLCQ---GNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 101 (40.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGK-NNTCPMTKQVLSSECELTP 63
+ P FLCPI+ +M DPV V +G T++R S++ G + T+ LS+ + P
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLST---VIP 86
Query: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPP 92
N ++ I SWC +++ P+PP
Sbjct: 87 NLAMKSTIFSWCDR------QKVDHPRPP 109
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P FLCPI+ +MKDPV G +Y++E++E W+ + K T PMT +L S LTPN
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWI-SKKKRTSPMTNLILPSMV-LTPNR 461
Query: 66 TLRRLIQSW 74
TL+ I W
Sbjct: 462 TLKMAISRW 470
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P F+CPI+ +MKDPV G +Y++E++E W+ + K T PMT VL S LTPN
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWI-SKKKRTSPMTNLVLPSAV-LTPNR 461
Query: 66 TLRRLIQSW 74
TL+ I W
Sbjct: 462 TLKMAINRW 470
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P++F+CPIS +M++P G TY+ ES+ +WL G + T PMT L+ L PNH
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNG-HETSPMTNLKLAHN-NLVPNHA 555
Query: 67 LRRLIQSWCTLNA 79
LR IQ W N+
Sbjct: 556 LRSAIQEWLQRNS 568
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 143 (55.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 10 FLCPISLAIMKDPVTVPTGITYDRESIEKWLF----AGKNNTCPMTKQVLSSECELTPNH 65
F+CP++ +M DPVT+ G T++RE+IEKW +G+ +CP+T Q L+S +++ +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTST-DVSASI 85
Query: 66 TLRRLIQSWCTLN 78
LR I+ W + N
Sbjct: 86 ALRNTIEEWRSRN 98
Score = 64 (27.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 80 SYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLRSIAAENETNKRCLESAGAV 139
S + R+P P PP+N + + P + K + I + ET CL GAV
Sbjct: 621 SIKLTRMPDP-PPVNYCGS---IFSCVRKPHVVNGLCKIHQGICSLRETF--CLVEGGAV 674
Query: 140 EFLASFVTNSNA--MEESPEGFDNLHESSRPVDEALSIL 176
E L + + + N +E + +L E V++ + IL
Sbjct: 675 EKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKIL 713
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 241 VEVIQVLHDHISQQASKSALEVLVNICPWGRNRIKGV----EAGAVXXXXXXXXXXXXER 296
VE + L DH + + ++AL L ++ G + KGV EA + ER
Sbjct: 674 VEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTER 733
Query: 297 ---RAS---EMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLS 350
RA E IL + D+ + AE E A + R Q+A E A++ +
Sbjct: 734 LTRRAVWMVERILRIEDIAREVAE---EQSLSAALVDAFQNADFRTRQIA-ENALKHIDK 789
Query: 351 ISKFSA 356
I FS+
Sbjct: 790 IPNFSS 795
Score = 42 (19.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 323 GAGLAIVSKKILRVSQVASERAVRILLSISKFSATNSVLQEMLQIGVVAKL 373
G+ +AI+S+K + + E+A L + QEML++G K+
Sbjct: 493 GSLVAIISEK----TPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKI 539
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 1 MEEID--VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSE 58
ME + +P F+CPI+ +MKDPV G +Y+RE++E W+ K T PMT L S
Sbjct: 397 MESLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-KKRTSPMTNLALPS- 454
Query: 59 CELTPNHTLRRLIQSW 74
LTPN TL+ I W
Sbjct: 455 LVLTPNRTLKMAINRW 470
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P F+CPI+ +MKDPV G +Y+RE++E W+ K T PMT L S LTPN
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHK-KKRTSPMTNLALPS-LVLTPNR 459
Query: 66 TLRRLIQSW 74
TL+ I W
Sbjct: 460 TLKMAINRW 468
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P+ +LCPI +MKDP+ G TY+ E+I +WL G ++T PMT + +C L PNH
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANG-HDTSPMTNLKME-DCNLIPNHA 793
Query: 67 LRRLIQSW 74
L IQ W
Sbjct: 794 LHLAIQDW 801
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
+ VP FLCPI+ +MKDPV G +Y++E++E W+ + + PMT L S LTP
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWI-SNNRRSSPMTNLPLPS-LVLTP 459
Query: 64 NHTLRRLIQSW 74
N TL+ I W
Sbjct: 460 NRTLKMAISRW 470
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 149 (57.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
PT F+CP+ +M +P G TYDR +IE+WL ++NT PMT L S+ L PN+T
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWL--KEHNTSPMTDSPLHSK-NLLPNYT 823
Query: 67 LRRLIQSW 74
L I W
Sbjct: 824 LYTAIMEW 831
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
PT + CPI IM+DP G TY+R++I++W+ + P+TK L +LTPNHT
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWI-QKHQDVSPVTKHRLKHS-DLTPNHT 766
Query: 67 LRRLIQSW 74
LR I+ W
Sbjct: 767 LRSAIREW 774
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P+ + CPI IM++P G TY+R++I WL K+N P+T+Q L +LTPNHT
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWL--EKHNISPVTRQKLD-HFKLTPNHT 782
Query: 67 LRRLIQSW 74
LR I+ W
Sbjct: 783 LRSAIRDW 790
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P +F+CPI +M+DP G TY+ E+I WL + +++T PMT LS L NH
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDS-EHDTSPMTNVKLS-HTSLIANHA 821
Query: 67 LRRLIQSW 74
LR IQ W
Sbjct: 822 LRSAIQEW 829
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 80 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 137
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 138 LAMKEVIDAFISEN 151
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 143 (55.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 10 FLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNN----TCPMTKQVLSSECELTPNH 65
F+CP++ +M +PVT+ G T++RE+IEKW + N +CP+T + LS +L+P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSIT-DLSPSI 87
Query: 66 TLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSPQMQIKCLKKLR 120
LR I+ W N + ++ I + A+ LL A K+ + + ++K+R
Sbjct: 88 ALRNTIEEWRARNDALKLD-IARQSLYLGNAETNILL--ALKNVREICRNIRKIR 139
Score = 42 (19.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 19/100 (19%), Positives = 41/100 (41%)
Query: 303 LTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQVASERAVRILLSISKFSATNSVLQ 362
L L ++ + E ++ G + + K + + E AV +L +SK A +
Sbjct: 167 LQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIG 226
Query: 363 EMLQIGVVAKLCLVLQVDNSMKTKDKAREVLKLHARAWKN 402
+ ++ + L ++ T +KA + L R+ +N
Sbjct: 227 S-IHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEEN 265
Score = 38 (18.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 239 LFVEVIQV-LHDHISQQASKSALEVL 263
LF++++Q D+I Q+AS +ALE L
Sbjct: 603 LFLDLLQSNSQDNI-QRASATALENL 627
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 139 (54.0 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
+P +FLCPIS IM+ P P G T++R SI +W F + +TK+ S+ L PN
Sbjct: 772 IPIYFLCPISQKIMEHPYVAPDGYTFERSSILEW-FDKRGAISFVTKRPFSTSAILIPNR 830
Query: 66 TLRRLIQSW 74
L+ IQ W
Sbjct: 831 NLKAQIQEW 839
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 135 (52.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 29/71 (40%), Positives = 38/71 (53%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P +F+CPI+ IM+DP G TY+ E+I +W G + T PM + L L PN
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERG-HETSPMINKRLP-HTSLVPNLA 411
Query: 67 LRRLIQSWCTL 77
LR IQ W L
Sbjct: 412 LRSAIQEWLQL 422
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 137 (53.3 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
+ PT F CPI+ +M++P G TY++ +I++WL KN+ PMT S+ L PN
Sbjct: 724 NAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWL--QKNHKSPMTDLPFPSD-SLLPN 780
Query: 65 HTLRRLIQSW 74
H+L I+ W
Sbjct: 781 HSLLSAIKEW 790
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/69 (42%), Positives = 37/69 (53%)
Query: 6 VPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNH 65
VP F+CPIS+ IMKDP G TY+ E+I W G + + PMT L + L PN
Sbjct: 435 VPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRS-PMTNLALPN-LNLVPNR 492
Query: 66 TLRRLIQSW 74
LR I +
Sbjct: 493 VLRSFIHGY 501
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
P+ F CP+ +MK+P G TYDR +IE+W+ + T P+T L + L PNHT
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM--ENHRTSPVTNSPLQN-VNLLPNHT 806
Query: 67 LRRLIQSWCTLN 78
L I W N
Sbjct: 807 LYAAIVEWRNRN 818
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 87/361 (24%), Positives = 149/361 (41%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
++P FLCPIS ++M DP+ V +G +Y+R + G T P S+ + PN
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPD---FST---VIPN 110
Query: 65 HTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKL-LNEAAKSPQMQIKCLKKLRSIA 123
L+ I SWC P PKP +N A KL L K PQ + + + I
Sbjct: 111 LALKSAIHSWCERRC------FPPPKP-LNSAAAEKLILALMEKKPQRRKVSVSEKELIQ 163
Query: 124 A-ENETNKRCLESAGAVEFLASFVTNSNAMEESPEGFDNLHESSRPV-------DEALSI 175
A ++ + R +A ++ ++ NS++ E L +++P E S+
Sbjct: 164 AIRDKPSVRLNHAATELDRRPNYF-NSSSDESIASSSRTLQLTTKPSCFSSPSSGEIESL 222
Query: 176 LCNLKISELGLKS-LVMGRNGTFVDSLTQIMQRGTYESRAYAVLLLKSMLEVAEPMQLIS 234
NL E L + L R ++L I +R T + + L + + A ++S
Sbjct: 223 EPNLTPEEEALLTKLKSNRISEIEEALISI-RRITRIDESSRISLCTTRVISALKSLIVS 281
Query: 235 LRQELFVEVIQVLHDHISQQASKSALEVLVNICPWGRNRIK--GVEAGAVXXXXXXXXXX 292
+ V V VL + +S + S V I P + +K VEA
Sbjct: 282 RYATVQVNVTAVLVN-LSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLAL 340
Query: 293 XXERRASEMILTVLDLLCQCAEGRAELLKHGAGLAIVSKKILRVSQ--VASERAVRILLS 350
E + + +L L+ L EL +H + LA+ +++ ++ + AV++LL
Sbjct: 341 EDENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLG 400
Query: 351 I 351
+
Sbjct: 401 M 401
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 122 (48.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
+VP I+L +MK+PV VP+GITYDRE I + L + P+T++ L+ E E+ PN
Sbjct: 184 EVPEMLCGKITLELMKEPVIVPSGITYDREEIVQHL-RRIGHFDPVTRKPLT-ENEIIPN 241
Query: 65 HTLRRLIQSW 74
+ L+ +I+ +
Sbjct: 242 YALKEVIEKF 251
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 4 IDVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
I+ P F+CPIS IM++P G TY+ + +WL G + PMT L + L P
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKS-PMTNLRLENR-NLIP 349
Query: 64 NHTLRRLIQSW 74
N LR I+ W
Sbjct: 350 NLVLRSAIKDW 360
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 154 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 211
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 212 LAMKEVIDAFISEN 225
>FB|FBgn0027052 [details] [associations]
symbol:CHIP "CHIP" species:7227 "Drosophila melanogaster"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0030018 "Z
disc" evidence=IDA] InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0043161 EMBL:AE014134 Gene3D:1.25.40.10 GO:GO:0046332
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0051879
GO:GO:0004842 InterPro:IPR013105 Pfam:PF07719 GO:GO:0032436
GO:GO:0000209 GO:GO:0000151 GO:GO:0030544 KO:K09561 OMA:QENELHS
GO:GO:0030911 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 FlyBase:FBgn0027052 EMBL:AF129084
EMBL:AY069760 RefSeq:NP_477441.1 UniGene:Dm.392 SMR:Q9XYW6
IntAct:Q9XYW6 MINT:MINT-316282 STRING:Q9XYW6
EnsemblMetazoa:FBtr0080027 GeneID:34433 KEGG:dme:Dmel_CG5203
UCSC:CG5203-RA CTD:34433 InParanoid:Q9XYW6 GenomeRNAi:34433
NextBio:788473 Uniprot:Q9XYW6
Length = 289
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
+VP F IS I+ DPV P+GITY+R+ IE+ L + P+T+ L+ + +L PN
Sbjct: 212 EVPDFLCGKISFEILTDPVITPSGITYERKDIEEHL-QRVGHFDPVTRVKLTQD-QLIPN 269
Query: 65 HTLRRLIQSWCTLN 78
+++ ++ S+ N
Sbjct: 270 FSMKEVVDSFIAEN 283
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 283
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 284 LAMKEVIDAFISEN 297
>POMBASE|SPAC20H4.10 [details] [associations]
symbol:ufd2 "ubiquitin-protein ligase E4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 UniPathway:UPA00143 PomBase:SPAC20H4.10 GO:GO:0005634
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0000151
GO:GO:0034450 KO:K10597 EMBL:AF059906 EMBL:AB027791 EMBL:AB032715
PIR:T43725 RefSeq:NP_593630.1 ProteinModelPortal:Q9HE05
MINT:MINT-4785000 STRING:Q9HE05 EnsemblFungi:SPAC20H4.10.1
GeneID:2542023 KEGG:spo:SPAC20H4.10 HOGENOM:HOG000188621
OMA:NERICKS OrthoDB:EOG4MPMZ8 NextBio:20803102 Uniprot:Q9HE05
Length = 1010
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 5 DVPTFFLCPISLAIMKDPVTVP-TGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTP 63
D+P +FL P+ IMKDPV +P +GI+ DR +I+ L + + T P + L+ + ++TP
Sbjct: 930 DIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKAHLLS--DATDPFNRTPLTLD-DVTP 986
Query: 64 NHTLRRLIQSW 74
N TLR I ++
Sbjct: 987 NDTLREEINTF 997
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 283
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 284 LAMKEVIDAFISEN 297
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 283
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 284 LAMKEVIDAFISEN 297
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 227 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 284
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 285 LAMKEVIDAFISEN 298
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 115 (45.5 bits), Expect = 0.00053, P = 0.00053
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 227 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 284
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 285 LAMKEVIDAFISEN 298
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 115 (45.5 bits), Expect = 0.00058, P = 0.00058
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ E +L PN
Sbjct: 226 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQE-QLIPN 283
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 284 LAMKEVIDAFISEN 297
>WB|WBGene00006734 [details] [associations]
symbol:ufd-2 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408 SMART:SM00504
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0040011
GO:GO:0007283 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 EMBL:Z47812 GO:GO:0000151
GO:GO:0051865 GO:GO:0034450 GO:GO:0042006
GeneTree:ENSGT00390000009300 KO:K10597 UniGene:Cel.7502
GeneID:174295 KEGG:cel:CELE_T05H10.5 UCSC:T05H10.5a CTD:174295
HOGENOM:HOG000020029 NextBio:883404 RefSeq:NP_495691.1
ProteinModelPortal:Q95QB5 SMR:Q95QB5 IntAct:Q95QB5
MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 121 (47.7 bits), Expect = 0.00065, P = 0.00065
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
DVP F PI AIM DPV +P+G DR IE+ L + NN P + LS EL+P+
Sbjct: 909 DVPEEFKDPIMDAIMVDPVKLPSGHVMDRAVIERHLLSTPNN--PFNRAPLSHN-ELSPD 965
Query: 65 HTLRRLIQSW 74
L+ IQ W
Sbjct: 966 SELKAKIQEW 975
>UNIPROTKB|Q95QB5 [details] [associations]
symbol:ufd-2 "Protein UFD-2, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040011 GO:GO:0007283 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 EMBL:Z47812 GO:GO:0000151 GO:GO:0051865 GO:GO:0034450
GO:GO:0042006 GeneTree:ENSGT00390000009300 KO:K10597
UniGene:Cel.7502 GeneID:174295 KEGG:cel:CELE_T05H10.5
UCSC:T05H10.5a CTD:174295 HOGENOM:HOG000020029 NextBio:883404
RefSeq:NP_495691.1 ProteinModelPortal:Q95QB5 SMR:Q95QB5
IntAct:Q95QB5 MINT:MINT-1073242 STRING:Q95QB5 PRIDE:Q95QB5
EnsemblMetazoa:T05H10.5b WormBase:T05H10.5b InParanoid:Q95QB5
OMA:YIAYDER ArrayExpress:Q95QB5 Uniprot:Q95QB5
Length = 984
Score = 121 (47.7 bits), Expect = 0.00065, P = 0.00065
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
DVP F PI AIM DPV +P+G DR IE+ L + NN P + LS EL+P+
Sbjct: 909 DVPEEFKDPIMDAIMVDPVKLPSGHVMDRAVIERHLLSTPNN--PFNRAPLSHN-ELSPD 965
Query: 65 HTLRRLIQSW 74
L+ IQ W
Sbjct: 966 SELKAKIQEW 975
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 112 (44.5 bits), Expect = 0.00075, P = 0.00075
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 5 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPN 64
D+P + IS +M++P P+GITYDR+ IE+ L + P+T+ L+ + +L PN
Sbjct: 174 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL-QRVGHFDPVTRSPLTQD-QLIPN 231
Query: 65 HTLRRLIQSWCTLN 78
++ +I ++ + N
Sbjct: 232 LAMKEVIDAFISEN 245
>UNIPROTKB|Q5X159 [details] [associations]
symbol:lubX "E3 ubiquitin-protein ligase LubX"
species:297246 "Legionella pneumophila str. Paris" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0043657 "host cell" evidence=ISS] InterPro:IPR003613
Pfam:PF04564 SMART:SM00504 GO:GO:0009405 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0043657
EMBL:CR628336 GenomeReviews:CR628336_GR RefSeq:YP_125189.1
ProteinModelPortal:Q5X159 STRING:Q5X159 GeneID:3116843
KEGG:lpp:lpp2887 PATRIC:22326475 LegioList:lpp2887
HOGENOM:HOG000140213 KO:K15488 OMA:TEIPDIF ProtClustDB:CLSK738037
Uniprot:Q5X159
Length = 240
Score = 111 (44.1 bits), Expect = 0.00086, P = 0.00086
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
PT CPI +KDPV P G Y++ SI KWL K + P +++ L+++ +L P
Sbjct: 32 PTMLTCPIDSGFLKDPVITPEGFVYNKSSILKWLETKKED--PQSRKPLTAK-DLQPFPE 88
Query: 67 LRRLIQSWCTLNASY 81
L ++ + +Y
Sbjct: 89 LLIIVNRFVETQTNY 103
>UNIPROTKB|Q5ZRQ0 [details] [associations]
symbol:lubX "E3 ubiquitin-protein ligase LubX"
species:272624 "Legionella pneumophila subsp. pneumophila str.
Philadelphia 1" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IDA] [GO:0009405
"pathogenesis" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0043657 "host cell" evidence=IDA]
InterPro:IPR003613 Pfam:PF04564 SMART:SM00504 GO:GO:0009405
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AE017354
GenomeReviews:AE017354_GR GO:GO:0000151 GO:GO:0043657
HOGENOM:HOG000140213 KO:K15488 OMA:TEIPDIF ProtClustDB:CLSK738037
RefSeq:YP_096825.1 ProteinModelPortal:Q5ZRQ0 DIP:DIP-59158N
STRING:Q5ZRQ0 GeneID:3079841 KEGG:lpn:lpg2830 PATRIC:22333041
eggNOG:NOG133361 BioCyc:LPNE272624:GHDI-2831-MONOMER Uniprot:Q5ZRQ0
Length = 246
Score = 111 (44.1 bits), Expect = 0.00092, P = 0.00092
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 7 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHT 66
PT CPI +KDPV P G Y++ SI KWL K + P +++ L+++ +L P
Sbjct: 38 PTMLTCPIDSGFLKDPVITPEGFVYNKSSILKWLETKKED--PQSRKPLTAK-DLQPFPE 94
Query: 67 LRRLIQSWCTLNASY 81
L ++ + +Y
Sbjct: 95 LLIIVNRFVETQTNY 109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 404 0.00099 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 613 (65 KB)
Total size of DFA: 233 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.08u 0.09s 32.17t Elapsed: 00:00:01
Total cpu time: 32.09u 0.09s 32.18t Elapsed: 00:00:01
Start: Thu May 9 15:04:27 2013 End: Thu May 9 15:04:28 2013