Your job contains 1 sequence.
>014915
MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI
PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI
PMPACRVFSMFAALAVLLDFFLQVTAFVALIEVHAPILGLWGVKMVVVSVFLAFTVASIA
LSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKDYNYSSESRHTNQLCSI
SQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYCPPDD
QPPCCSPDEEPCGVNGVCKDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGG
HGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLKV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014915
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035878 - symbol:AT1G42470 species:3702 "Arabi... 1024 1.2e-160 2
UNIPROTKB|F1SSH5 - symbol:NPC1L1 "Uncharacterized protein... 457 1.4e-70 2
RGD|1303135 - symbol:Npc1l1 "NPC1-like 1" species:10116 "... 427 3.3e-68 2
UNIPROTKB|E1BPS5 - symbol:NPC1L1 "Uncharacterized protein... 427 3.0e-67 2
MGI|MGI:2685089 - symbol:Npc1l1 "NPC1-like 1" species:100... 426 1.0e-66 2
FB|FBgn0024320 - symbol:Npc1a "Niemann-Pick type C-1a" sp... 325 3.7e-66 3
UNIPROTKB|Q9UHC9 - symbol:NPC1L1 "Niemann-Pick C1-like pr... 401 7.2e-65 2
UNIPROTKB|G4NE97 - symbol:MGG_00819 "Niemann-Pick C1 prot... 302 8.9e-63 3
UNIPROTKB|G3V7K5 - symbol:Cdig2 "RCG41239" species:10116 ... 380 1.5e-61 2
UNIPROTKB|F1SBB5 - symbol:NPC1 "Niemann-Pick C1 protein" ... 371 3.2e-61 2
UNIPROTKB|P56941 - symbol:NPC1 "Niemann-Pick C1 protein" ... 371 3.2e-61 2
MGI|MGI:1097712 - symbol:Npc1 "Niemann Pick type C1" spec... 368 1.7e-60 2
DICTYBASE|DDB_G0269158 - symbol:npcA "Niemann-Pick C type... 286 8.0e-60 3
UNIPROTKB|Q9JLG3 - symbol:NPC1 "Niemann-Pick type C1 prot... 361 1.2e-59 2
ASPGD|ASPL0000051085 - symbol:AN2119 species:162425 "Emer... 298 4.1e-59 3
UNIPROTKB|B4DET3 - symbol:NPC1 "Niemann-Pick C1 protein" ... 347 5.4e-59 2
UNIPROTKB|K7EQ23 - symbol:NPC1 "Niemann-Pick C1 protein" ... 347 5.7e-59 2
UNIPROTKB|Q9TT75 - symbol:NPC1 "Niemann-Pick type C1 dise... 345 9.3e-59 2
UNIPROTKB|O15118 - symbol:NPC1 "Niemann-Pick C1 protein" ... 347 1.5e-58 2
ZFIN|ZDB-GENE-030131-3161 - symbol:npc1 "Niemann-Pick dis... 339 6.4e-58 2
UNIPROTKB|B7ZLE6 - symbol:NPC1L1 "Niemann-Pick C1-like pr... 604 1.0e-57 1
UNIPROTKB|F1NQT4 - symbol:NPC1 "Uncharacterized protein" ... 309 1.5e-55 2
UNIPROTKB|F1PB50 - symbol:NPC1 "Uncharacterized protein" ... 312 3.8e-55 2
UNIPROTKB|B0JYK2 - symbol:NPC1 "Uncharacterized protein" ... 308 2.7e-54 2
CGD|CAL0003873 - symbol:NCR1 species:5476 "Candida albica... 313 2.8e-53 2
FB|FBgn0261675 - symbol:Npc1b "Niemann-Pick type C-1b" sp... 280 2.6e-52 3
UNIPROTKB|Q8MKD8 - symbol:Q8MKD8 "Niemann-Pick C1" specie... 302 3.5e-50 2
UNIPROTKB|Q9N0Q0 - symbol:NPC1 "Niemann-Pick type C1 dise... 296 1.5e-49 2
UNIPROTKB|Q8MI49 - symbol:Q8MI49 "Mutant Niemann-Pick C1"... 302 3.9e-49 2
DICTYBASE|DDB_G0276657 - symbol:npcB "Niemann-Pick C type... 279 1.2e-47 3
SGD|S000005927 - symbol:NCR1 "Vacuolar membrane protein" ... 236 3.4e-34 2
WB|WBGene00003561 - symbol:ncr-1 species:6239 "Caenorhabd... 260 1.9e-26 2
UNIPROTKB|J9PBB6 - symbol:J9PBB6 "Uncharacterized protein... 283 7.6e-25 1
WB|WBGene00003562 - symbol:ncr-2 species:6239 "Caenorhabd... 161 2.4e-18 3
ZFIN|ZDB-GENE-041210-239 - symbol:si:ch211-250m6.7 "si:ch... 170 4.5e-15 2
UNIPROTKB|H9L1J3 - symbol:H9L1J3 "Uncharacterized protein... 195 5.9e-15 1
WB|WBGene00004217 - symbol:ptr-2 species:6239 "Caenorhabd... 208 6.4e-15 2
ZFIN|ZDB-GENE-980526-196 - symbol:ptch1 "patched 1" speci... 190 1.6e-14 2
ZFIN|ZDB-GENE-980526-44 - symbol:ptch2 "patched 2" specie... 188 2.6e-14 2
UNIPROTKB|F1NYG9 - symbol:PTCH1 "Protein patched homolog ... 192 9.7e-14 2
UNIPROTKB|Q90693 - symbol:PTCH1 "Protein patched homolog ... 192 1.2e-13 2
UNIPROTKB|F1PNE0 - symbol:PTCH1 "Uncharacterized protein"... 192 1.6e-13 2
MGI|MGI:105373 - symbol:Ptch1 "patched homolog 1" species... 192 2.5e-13 2
UNIPROTKB|Q6UY90 - symbol:Ptch1 "Protein Ptch1" species:1... 192 2.5e-13 2
UNIPROTKB|Q13635 - symbol:PTCH1 "Protein patched homolog ... 192 2.6e-13 2
UNIPROTKB|I3LVF2 - symbol:PTCH1 "Uncharacterized protein"... 192 2.6e-13 2
WB|WBGene00000902 - symbol:daf-6 species:6239 "Caenorhabd... 178 1.9e-12 2
WB|WBGene00004232 - symbol:ptr-18 species:6239 "Caenorhab... 194 2.6e-12 2
RGD|621425 - symbol:Ptch1 "patched 1" species:10116 "Ratt... 194 2.6e-12 1
UNIPROTKB|H3BLX7 - symbol:PTCH1 "Protein patched homolog ... 191 3.7e-12 1
UNIPROTKB|G3N1D5 - symbol:G3N1D5 "Uncharacterized protein... 191 5.0e-12 1
UNIPROTKB|E1B778 - symbol:PTCH2 "Uncharacterized protein"... 192 5.9e-12 2
MGI|MGI:1921925 - symbol:Ptchd3 "patched domain containin... 154 8.1e-12 2
MGI|MGI:1095405 - symbol:Ptch2 "patched homolog 2" specie... 193 1.1e-11 2
UNIPROTKB|E2RHI9 - symbol:PTCH2 "Uncharacterized protein"... 192 1.2e-11 2
WB|WBGene00004220 - symbol:ptr-5 species:6239 "Caenorhabd... 187 3.2e-11 1
WB|WBGene00004224 - symbol:ptr-10 species:6239 "Caenorhab... 177 4.3e-11 2
WB|WBGene00004230 - symbol:ptr-16 species:6239 "Caenorhab... 183 7.1e-11 1
UNIPROTKB|G3N231 - symbol:PTCHD3 "Uncharacterized protein... 146 8.9e-11 2
WB|WBGene00004231 - symbol:ptr-17 species:6239 "Caenorhab... 181 1.4e-10 1
UNIPROTKB|F1LW60 - symbol:F1LW60 "Uncharacterized protein... 188 1.6e-10 2
UNIPROTKB|Q9Y6C5 - symbol:PTCH2 "Protein patched homolog ... 180 1.7e-10 2
UNIPROTKB|F1MMY0 - symbol:PTCHD3 "Uncharacterized protein... 146 1.7e-10 2
WB|WBGene00004233 - symbol:ptr-19 species:6239 "Caenorhab... 165 6.1e-10 2
FB|FBgn0262867 - symbol:Ptr "Patched-related" species:722... 147 7.6e-10 2
FB|FBgn0003892 - symbol:ptc "patched" species:7227 "Droso... 147 1.5e-09 2
WB|WBGene00004210 - symbol:ptc-3 species:6239 "Caenorhabd... 171 2.9e-09 1
UNIPROTKB|Q3KNS1 - symbol:PTCHD3 "Patched domain-containi... 142 5.1e-09 2
WB|WBGene00004229 - symbol:ptr-15 species:6239 "Caenorhab... 165 7.3e-09 1
UNIPROTKB|I3LN22 - symbol:PTCHD3 "Uncharacterized protein... 127 1.5e-08 2
WB|WBGene00004228 - symbol:ptr-14 species:6239 "Caenorhab... 162 8.5e-08 2
UNIPROTKB|H0Y3B8 - symbol:PTCH1 "Protein patched homolog ... 147 1.7e-07 1
MGI|MGI:2135958 - symbol:Scap "SREBF chaperone" species:1... 154 2.0e-07 1
WB|WBGene00004218 - symbol:ptr-3 species:6239 "Caenorhabd... 145 2.1e-07 2
UNIPROTKB|F8W921 - symbol:SCAP "Sterol regulatory element... 152 2.5e-07 1
WB|WBGene00004236 - symbol:ptr-22 species:6239 "Caenorhab... 151 2.8e-07 2
WB|WBGene00004208 - symbol:ptc-1 species:6239 "Caenorhabd... 153 2.9e-07 1
WB|WBGene00004209 - symbol:ptc-2 species:6239 "Caenorhabd... 149 3.1e-07 1
ZFIN|ZDB-GENE-040107-41 - symbol:scap "SREBF chaperone" s... 152 3.3e-07 1
UNIPROTKB|F1PI33 - symbol:SCAP "Uncharacterized protein" ... 152 3.3e-07 1
UNIPROTKB|Q12770 - symbol:SCAP "Sterol regulatory element... 152 3.3e-07 1
UNIPROTKB|Q5MNU5 - symbol:SCAP "Sterol regulatory element... 152 3.3e-07 1
UNIPROTKB|F1SNT3 - symbol:SCAP "Sterol regulatory element... 152 3.3e-07 1
RGD|1309378 - symbol:Scap "SREBF chaperone" species:10116... 151 4.3e-07 1
UNIPROTKB|A6QM06 - symbol:SCAP "Sterol regulatory element... 151 4.3e-07 1
UNIPROTKB|F1MQ33 - symbol:SCAP "Sterol regulatory element... 151 4.3e-07 1
UNIPROTKB|P97260 - symbol:SCAP "Sterol regulatory element... 150 5.5e-07 1
UNIPROTKB|F1NK67 - symbol:SCAP "Uncharacterized protein" ... 145 1.1e-06 2
WB|WBGene00004223 - symbol:ptr-9 species:6239 "Caenorhabd... 130 1.1e-06 2
UNIPROTKB|G3N2V7 - symbol:G3N2V7 "Uncharacterized protein... 141 1.4e-06 1
WB|WBGene00004225 - symbol:ptr-11 species:6239 "Caenorhab... 144 1.5e-06 1
UNIPROTKB|F1PR19 - symbol:F1PR19 "Uncharacterized protein... 137 3.2e-06 1
UNIPROTKB|F1Q2F3 - symbol:F1Q2F3 "Uncharacterized protein... 136 4.1e-06 1
WB|WBGene00004221 - symbol:ptr-6 species:6239 "Caenorhabd... 145 4.2e-06 2
WB|WBGene00004216 - symbol:ptr-1 species:6239 "Caenorhabd... 136 4.6e-06 2
WB|WBGene00004234 - symbol:ptr-20 species:6239 "Caenorhab... 140 5.3e-06 2
WB|WBGene00004222 - symbol:ptr-8 species:6239 "Caenorhabd... 137 4.0e-05 2
WB|WBGene00004237 - symbol:ptr-23 species:6239 "Caenorhab... 130 6.3e-05 1
WB|WBGene00004219 - symbol:ptr-4 species:6239 "Caenorhabd... 129 7.9e-05 1
WB|WBGene00004227 - symbol:ptr-13 species:6239 "Caenorhab... 124 0.00023 2
WARNING: Descriptions of 2 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035878 [details] [associations]
symbol:AT1G42470 species:3702 "Arabidopsis thaliana"
[GO:0008158 "hedgehog receptor activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 EMBL:CP002684 GO:GO:0005886 GO:GO:0009506
GO:GO:0030301 GO:GO:0008158 KO:K12385 TIGRFAMs:TIGR00917
IPI:IPI00535281 RefSeq:NP_174975.2 UniGene:At.39097
ProteinModelPortal:F4I9G5 SMR:F4I9G5 PRIDE:F4I9G5
EnsemblPlants:AT1G42470.1 GeneID:840851 KEGG:ath:AT1G42470
OMA:WVARHPT Uniprot:F4I9G5
Length = 1272
Score = 1024 (365.5 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 190/265 (71%), Positives = 223/265 (84%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
EVHAP+L W VK+VV++ F +A IALSTRIE GLEQQIVLP+DSYLQGYF+N + Y
Sbjct: 802 EVHAPVLSHWIVKIVVIAFFFGLAMAGIALSTRIEPGLEQQIVLPQDSYLQGYFNNISTY 861
Query: 212 LRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASW 271
LR+GPPLYFV+K+YNYSSESRHTNQLCSI++C+ NSLLNEI+RAS PELSYIAKPAASW
Sbjct: 862 LRIGPPLYFVLKNYNYSSESRHTNQLCSINKCNPNSLLNEIARASLTPELSYIAKPAASW 921
Query: 272 LDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLV 331
LDDFLVW SPEAFGCCRKF NGT+ G++ VCKDCTTCFRH+DL
Sbjct: 922 LDDFLVWLSPEAFGCCRKFTNGTFCPPDDQPPCCPPGQTSCGLSEVCKDCTTCFRHADLS 981
Query: 332 NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLN 391
++RPST QF+EKLPWFLNALPSADCAKGGHGAYS+SVDL GY +GIIQAS FRT+HTPLN
Sbjct: 982 SDRPSTTQFKEKLPWFLNALPSADCAKGGHGAYSSSVDLQGYANGIIQASSFRTYHTPLN 1041
Query: 392 KQGDYVNSLRAAREFSSRMSDTLKV 416
KQ D+VNS+RAA+EFS+++S +LK+
Sbjct: 1042 KQVDFVNSMRAAQEFSAKVSRSLKM 1066
Score = 562 (202.9 bits), Expect = 1.2e-160, Sum P(2) = 1.2e-160
Identities = 117/151 (77%), Positives = 129/151 (85%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MFAYIS+ LGD+PR SFY++SKVLLGLSGV+LVMLSVLGSVGFFSA+G+KSTLIIMEVI
Sbjct: 607 MFAYISLTLGDSPRLKSFYITSKVLLGLSGVLLVMLSVLGSVGFFSAVGMKSTLIIMEVI 666
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
PFLVLAVGVDNMCILV+AVKRQ EL LE RISNAL+EVGPSITLASL+E LAFAVG+FI
Sbjct: 667 PFLVLAVGVDNMCILVHAVKRQEQELPLERRISNALMEVGPSITLASLAEILAFAVGAFI 726
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA RVFSM Q+TAFVALI
Sbjct: 727 KMPAVRVFSMFAALAVLLDFLLQITAFVALI 757
Score = 37 (18.1 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 157 ILGLWGVKMVVVSV 170
+LGL GV +V++SV
Sbjct: 631 LLGLSGVLLVMLSV 644
>UNIPROTKB|F1SSH5 [details] [associations]
symbol:NPC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0030301 "cholesterol transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0006695 GO:GO:0042632 GO:GO:0042157 GO:GO:0030299
GO:GO:0008158 GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00917
OMA:FMAERSL EMBL:CU856650 Ensembl:ENSSSCT00000018228 Uniprot:F1SSH5
Length = 1332
Score = 457 (165.9 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 105/265 (39%), Positives = 147/265 (55%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP L W ++VV+ +FLA AS+ L I GL+Q++ LP+DSYL YF Y
Sbjct: 837 YAPFLLHWFTRVVVMLLFLALFGASLYLMCFITVGLDQELALPKDSYLLDYFLFLNRYFE 896
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
VGPP+YFV YN++SE N +CS + C++ SL +I A+ P+ SY+A PA+SW+
Sbjct: 897 VGPPVYFVTTGGYNFTSEEG-INAICSSAGCNNFSLTQKIQYATEFPDQSYLAIPASSWV 955
Query: 273 DDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVN 332
DDF+ W S + CCR +++G K C + F +
Sbjct: 956 DDFIDWLSSSS--CCRLYISGPNKDEFCPSTVSSLA--------CLKTCIS-FTTGTV-- 1002
Query: 333 NRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNK 392
RP+ EQF LPWFLN +P+ C KGG GAYSTSV+L G + AS F +H PL
Sbjct: 1003 -RPTVEQFHRYLPWFLNDMPNIKCPKGGLGAYSTSVNLG--PDGQVLASRFMAYHKPLKN 1059
Query: 393 QGDYVNSLRAAREFSSRMS-DTLKV 416
DY +LRA+R ++ ++ D LKV
Sbjct: 1060 SQDYTEALRASRALAANITADLLKV 1084
Score = 301 (111.0 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 67/155 (43%), Positives = 95/155 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F YIS+ALG + V SK LGL GV++V+ +V+ S+GFF+ +GV S+L+I++V+
Sbjct: 644 IFLYISLALGTYSSWRRVLVDSKATLGLGGVVVVLGAVMASMGFFAYLGVPSSLVILQVV 703
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMEL--VLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVG DN+ I V +R P E I AL V PS+ L SLSE + F +G+
Sbjct: 704 PFLVLAVGADNIFIFVLEYQRLPRNPGEQREAHIGRALGRVAPSMLLCSLSEAICFFLGA 763
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
PMPA R F++ Q++AFVAL+ +
Sbjct: 764 LTPMPAVRTFALISGLAVLLDFLLQMSAFVALLSL 798
>RGD|1303135 [details] [associations]
symbol:Npc1l1 "NPC1-like 1" species:10116 "Rattus norvegicus"
[GO:0006695 "cholesterol biosynthetic process" evidence=ISO]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=ISO]
[GO:0030299 "intestinal cholesterol absorption" evidence=ISO]
[GO:0030301 "cholesterol transport" evidence=IEA;ISO] [GO:0031489
"myosin V binding" evidence=ISO] [GO:0031526 "brush border
membrane" evidence=IDA] [GO:0042157 "lipoprotein metabolic process"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042632 "cholesterol homeostasis" evidence=IEA;ISO]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 RGD:1303135 GO:GO:0016021
GO:GO:0042493 GO:GO:0016324 GO:GO:0008144 GO:GO:0008203
GO:GO:0031526 GO:GO:0030301 GO:GO:0008158 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 CTD:29881 KO:K14461 EMBL:AY437867
IPI:IPI00454430 RefSeq:NP_001002025.1 UniGene:Rn.123563
ProteinModelPortal:Q6T3U3 PRIDE:Q6T3U3 GeneID:432367
KEGG:rno:432367 BindingDB:Q6T3U3 ChEMBL:CHEMBL5161 NextBio:696855
Genevestigator:Q6T3U3 Uniprot:Q6T3U3
Length = 1331
Score = 427 (155.4 bits), Expect = 3.3e-68, Sum P(2) = 3.3e-68
Identities = 98/265 (36%), Positives = 145/265 (54%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
+++AP L ++ VV+ +FL A++ L I GL+Q++ LP+DSYL YF Y
Sbjct: 834 KIYAPFLLHRFIRPVVMLLFLTLFGANLYLMCNINVGLDQELALPKDSYLIDYFLFLNRY 893
Query: 212 LRVGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAAS 270
L VGPP+YFV +N+SSE+ N CS + C S SL +I AS P+ SY+A A+S
Sbjct: 894 LEVGPPVYFVTTSGFNFSSEAG-MNATCSSAGCKSFSLTQKIQYASEFPDQSYVAIAASS 952
Query: 271 WLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDL 330
W+DDF+ W +P + CCR ++ G + K+C + L
Sbjct: 953 WVDDFIDWLTPSS-SCCRLYIRGPHKDEFCPSTDTSF--------NCLKNCM----NRTL 999
Query: 331 VNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPL 390
RP+ EQF + LPWFLN P+ C KGG AY TSV+L+ G + AS+F +H PL
Sbjct: 1000 GPVRPTAEQFHKYLPWFLNDPPNIRCPKGGLAAYRTSVNLSS--DGQVIASQFMAYHKPL 1057
Query: 391 NKQGDYVNSLRAAREFSSRMSDTLK 415
D+ +LRA+R ++ ++ L+
Sbjct: 1058 RNSQDFTEALRASRLLAANITADLR 1082
Score = 309 (113.8 bits), Expect = 3.3e-68, Sum P(2) = 3.3e-68
Identities = 71/156 (45%), Positives = 96/156 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F YIS+ALG R S V SK LGL GVI+V+ +VL ++GF+S +GV S+L+I++V+
Sbjct: 643 VFLYISLALGSYSRCSRVAVESKATLGLGGVIVVLGAVLAAMGFYSYLGVPSSLVIIQVV 702
Query: 61 PFLVLAVGVDNMCILV---NAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
PFLVLAVG DN+ I V + R P E E I L V PS+ L SLSE + F +G
Sbjct: 703 PFLVLAVGADNIFIFVLEYQRLPRMPGEQ-REAHIGRTLGSVAPSMLLCSLSEAICFFLG 761
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+ PMPA R F++ Q+TAFVAL+ +
Sbjct: 762 ALTPMPAVRTFALTSGLAIILDFLLQMTAFVALLSL 797
>UNIPROTKB|E1BPS5 [details] [associations]
symbol:NPC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0030301 "cholesterol transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0006695 GO:GO:0042632 GO:GO:0042157 GO:GO:0030299
GO:GO:0008158 GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00917
CTD:29881 KO:K14461 OMA:FMAERSL EMBL:DAAA02011180 IPI:IPI00699799
RefSeq:XP_002686936.1 RefSeq:XP_588051.4 Ensembl:ENSBTAT00000061036
GeneID:539550 KEGG:bta:539550 NextBio:20878066 Uniprot:E1BPS5
Length = 1333
Score = 427 (155.4 bits), Expect = 3.0e-67, Sum P(2) = 3.0e-67
Identities = 100/264 (37%), Positives = 145/264 (54%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+ P L W ++VVV +FLA AS+ I GL+QQ+ LP+DSYL YF Y
Sbjct: 838 YVPFLLHWLTRVVVVLLFLALFAASLYFMCYINVGLDQQLALPKDSYLIDYFLFMNRYFE 897
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
VG P+YFV YN+SSE N +CS + C++ SL +I A+ P++SY+A PA+SW+
Sbjct: 898 VGAPVYFVTTGGYNFSSEEG-MNAICSSAGCNNFSLTQKIQYATDFPDMSYLAIPASSWV 956
Query: 273 DDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCT-TCFRHSDLV 331
DDF+ W + + CCR +++G VN + C TC +
Sbjct: 957 DDFIDWLTSSS--CCRLYISGPNKDEFCPST----------VNSLA--CLKTCVSPT-AG 1001
Query: 332 NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLN 391
+ RPS EQF + LPWFL+ P+ C KGG AYSTSV+++ G I AS F ++ PL
Sbjct: 1002 SARPSVEQFHKYLPWFLSDEPNIKCPKGGLAAYSTSVNMSS--DGQILASRFMAYNKPLK 1059
Query: 392 KQGDYVNSLRAAREFSSRMSDTLK 415
D+ +LRA R ++ ++ L+
Sbjct: 1060 NSRDFTEALRATRALAANITADLR 1083
Score = 300 (110.7 bits), Expect = 3.0e-67, Sum P(2) = 3.0e-67
Identities = 69/156 (44%), Positives = 96/156 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F YIS+ALG + V SK LGL GV +V+ +V+ S+GFFS +GV S+L+I++V+
Sbjct: 645 IFLYISLALGSYSSWRRVPVDSKATLGLGGVAVVLGAVVASMGFFSYLGVPSSLVILQVV 704
Query: 61 PFLVLAVGVDNMCILV---NAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
PFLVLAVG DN+ I V + R+P E E I AL V PS+ L SLSE + F +G
Sbjct: 705 PFLVLAVGADNIFIFVLEYQRLPRRPGE-EREAHIGRALGRVAPSMLLCSLSEAICFFLG 763
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+ PMPA R F++ Q++AFVAL+ +
Sbjct: 764 ALTPMPAVRTFALTSGFAVLLDFLLQMSAFVALLSL 799
>MGI|MGI:2685089 [details] [associations]
symbol:Npc1l1 "NPC1-like 1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006695 "cholesterol
biosynthetic process" evidence=ISO] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0008202 "steroid metabolic process"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0017137 "Rab GTPase
binding" evidence=ISO] [GO:0030299 "intestinal cholesterol
absorption" evidence=ISO] [GO:0030301 "cholesterol transport"
evidence=ISO] [GO:0031489 "myosin V binding" evidence=ISO]
[GO:0042157 "lipoprotein metabolic process" evidence=ISO]
[GO:0042632 "cholesterol homeostasis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 MGI:MGI:2685089 GO:GO:0016021
GO:GO:0016324 GO:GO:0006695 GO:GO:0042632 GO:GO:0042157
GO:GO:0030299 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 HOVERGEN:HBG003913 TIGRFAMs:TIGR00917
HOGENOM:HOG000036674 CTD:29881 KO:K14461 OrthoDB:EOG490787
EMBL:AY437866 EMBL:AL607152 IPI:IPI00114063 RefSeq:NP_997125.2
UniGene:Mm.212492 ProteinModelPortal:Q6T3U4 SMR:Q6T3U4
STRING:Q6T3U4 PhosphoSite:Q6T3U4 PRIDE:Q6T3U4
Ensembl:ENSMUST00000004505 GeneID:237636 KEGG:mmu:237636
UCSC:uc007hyb.2 InParanoid:Q6T3U4 ChEMBL:CHEMBL1075296
NextBio:383428 Bgee:Q6T3U4 CleanEx:MM_NPC1L1 Genevestigator:Q6T3U4
GermOnline:ENSMUSG00000020447 Uniprot:Q6T3U4
Length = 1333
Score = 426 (155.0 bits), Expect = 1.0e-66, Sum P(2) = 1.0e-66
Identities = 98/265 (36%), Positives = 143/265 (53%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
+++ P L ++ VV+ +FL A++ L I GL+Q + LP+DSYL YF Y
Sbjct: 834 KIYTPFLLHRFIRPVVLLLFLVLFGANLYLMCNISVGLDQDLALPKDSYLIDYFLFLNRY 893
Query: 212 LRVGPPLYF-VVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAAS 270
L VGPP+YF YN+S+E+ N +CS + C+S SL +I AS P SY+A A+S
Sbjct: 894 LEVGPPVYFDTTSGYNFSTEAG-MNAICSSAGCESFSLTQKIQYASEFPNQSYVAIAASS 952
Query: 271 WLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDL 330
W+DDF+ W +P + CCR + G + K+C + L
Sbjct: 953 WVDDFIDWLTPSS-SCCRIYTRGPHKDEFCPSTDTSF--------NCLKNCM----NRTL 999
Query: 331 VNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPL 390
RP+TEQF + LPWFLN P+ C KGG AY TSV+L+ G I AS+F +H PL
Sbjct: 1000 GPVRPTTEQFHKYLPWFLNDTPNIRCPKGGLAAYRTSVNLSS--DGQIIASQFMAYHKPL 1057
Query: 391 NKQGDYVNSLRAAREFSSRMSDTLK 415
D+ +LRA+R ++ ++ L+
Sbjct: 1058 RNSQDFTEALRASRLLAANITAELR 1082
Score = 296 (109.3 bits), Expect = 1.0e-66, Sum P(2) = 1.0e-66
Identities = 68/156 (43%), Positives = 95/156 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F YIS+ALG R+S V SK LGL GV +V+ +V+ ++GF+S +GV S+L+I++V+
Sbjct: 643 VFLYISLALGSYSRWSRVAVDSKATLGLGGVAVVLGAVVAAMGFYSYLGVPSSLVIIQVV 702
Query: 61 PFLVLAVGVDNMCILV---NAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
PFLVLAVG DN+ I V + R P E E I L V PS+ L SLSE + F +G
Sbjct: 703 PFLVLAVGADNIFIFVLEYQRLPRMPGEQ-REAHIGRTLGSVAPSMLLCSLSEAICFFLG 761
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+ MPA R F++ Q+TAFVAL+ +
Sbjct: 762 ALTSMPAVRTFALTSGLAIIFDFLLQMTAFVALLSL 797
>FB|FBgn0024320 [details] [associations]
symbol:Npc1a "Niemann-Pick type C-1a" species:7227
"Drosophila melanogaster" [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0030301 "cholesterol transport" evidence=ISS]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007591 "molting cycle,
chitin-based cuticle" evidence=IMP] [GO:0016125 "sterol metabolic
process" evidence=IMP] [GO:0045456 "ecdysteroid biosynthetic
process" evidence=IMP] [GO:0032374 "regulation of cholesterol
transport" evidence=IDA] [GO:0007291 "sperm individualization"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007291 GO:GO:0007591 GO:GO:0032374 GO:GO:0016125
GO:GO:0030301 GO:GO:0008158 GO:GO:0045456 eggNOG:NOG149152
TIGRFAMs:TIGR00917 ChiTaRS:NPC1 EMBL:BT009977
ProteinModelPortal:Q7YU59 SMR:Q7YU59 STRING:Q7YU59 PaxDb:Q7YU59
PRIDE:Q7YU59 FlyBase:FBgn0024320 InParanoid:Q7YU59
OrthoDB:EOG4JSXMB ArrayExpress:Q7YU59 Bgee:Q7YU59 Uniprot:Q7YU59
Length = 1287
Score = 325 (119.5 bits), Expect = 3.7e-66, Sum P(3) = 3.7e-66
Identities = 72/153 (47%), Positives = 96/153 (62%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YI+++LG F ++ SK+ LG+ GVI+V+ SV+ SVG F IG+ +TLII+EVI
Sbjct: 633 MFMYIAISLGHVKEFKRVFIDSKITLGIGGVIIVLASVVSSVGVFGYIGLPATLIIVEVI 692
Query: 61 PFLVLAVGVDNMCILVNAVKR---QPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
PFLVLAVGVDN+ ILV +R +P E LE ++ L +VGPSI L SLSE F +G
Sbjct: 693 PFLVLAVGVDNIFILVQTHQRDQRKPNE-TLEQQVGRILGKVGPSILLTSLSESFCFFLG 751
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVAL 150
MPA R F++ Q+T FV+L
Sbjct: 752 GLSDMPAVRAFALYAGVALIIDFLLQITCFVSL 784
Score = 264 (98.0 bits), Expect = 3.7e-66, Sum P(3) = 3.7e-66
Identities = 53/137 (38%), Positives = 87/137 (63%)
Query: 153 VHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYL 212
V+ P L V+ V+ +F A+ SIA++ RI+ GL+Q++ +P+DS++ YF + E L
Sbjct: 825 VYVPFLMKKIVRASVMVIFFAWLCFSIAIAPRIDIGLDQELAMPQDSFVLHYFQSLDENL 884
Query: 213 RVGPPLYFVVK-DYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASW 271
+GPP+YFV+K D Y++ S N +C+ C+ +S+L +I AS +YIA+PA+SW
Sbjct: 885 NIGPPVYFVLKGDLAYTNSSDQ-NLVCAGQYCNDDSVLTQIYLASRHSNQTYIARPASSW 943
Query: 272 LDDFLVWTSPEAFGCCR 288
+DD+ W + A CC+
Sbjct: 944 IDDYFDWAAA-ASSCCK 959
Score = 154 (59.3 bits), Expect = 3.7e-66, Sum P(3) = 3.7e-66
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 322 TTCFRHSDLVNN--RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDL-NGYESGII 378
T+C R + N+ RP ++F + LP+FL P CAK GH AY +V N +E I
Sbjct: 973 TSCLRCNITKNSLLRPEEKEFVKYLPFFLKDNPDDTCAKAGHAAYGGAVRYSNSHERLNI 1032
Query: 379 QASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLK 415
+AS F +HT L DY +L +AR+ S+ ++ L+
Sbjct: 1033 EASYFMAYHTILKSSADYFLALESARKISANITQMLQ 1069
>UNIPROTKB|Q9UHC9 [details] [associations]
symbol:NPC1L1 "Niemann-Pick C1-like protein 1" species:9606
"Homo sapiens" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016324 "apical plasma membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0017137 "Rab
GTPase binding" evidence=IPI] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006695 "cholesterol biosynthetic process" evidence=IMP]
[GO:0030299 "intestinal cholesterol absorption" evidence=IMP]
[GO:0042157 "lipoprotein metabolic process" evidence=IMP]
[GO:0030301 "cholesterol transport" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0006629 "lipid metabolic
process" evidence=TAS] [GO:0015918 "sterol transport" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0005886
GO:GO:0016324 GO:GO:0006695 GO:GO:0042632 GO:GO:0042157
GO:GO:0030299 GO:GO:0030659 EMBL:CH236960 EMBL:CH471128
DrugBank:DB00973 GO:GO:0008158 EMBL:AC004938 eggNOG:NOG149152
HOVERGEN:HBG003913 HOGENOM:HOG000036674 EMBL:AF192522 EMBL:AF192523
EMBL:AY515256 EMBL:AY437865 EMBL:FJ481111 EMBL:BC117178
IPI:IPI00002984 IPI:IPI00640209 IPI:IPI00641846
RefSeq:NP_001095118.1 RefSeq:NP_037521.2 UniGene:Hs.567486 PDB:3QNT
PDBsum:3QNT ProteinModelPortal:Q9UHC9 SMR:Q9UHC9 IntAct:Q9UHC9
STRING:Q9UHC9 TCDB:2.A.6.6.6 PhosphoSite:Q9UHC9 DMDM:73921245
PRIDE:Q9UHC9 Ensembl:ENST00000289547 Ensembl:ENST00000381160
Ensembl:ENST00000423141 GeneID:29881 KEGG:hsa:29881 UCSC:uc003tld.3
CTD:29881 GeneCards:GC07M044552 H-InvDB:HIX0201184 HGNC:HGNC:7898
HPA:HPA018105 MIM:608010 neXtProt:NX_Q9UHC9 PharmGKB:PA31699
InParanoid:Q9UHC9 KO:K14461 OMA:FMAERSL OrthoDB:EOG490787
PhylomeDB:Q9UHC9 BindingDB:Q9UHC9 ChEMBL:CHEMBL2027
GenomeRNAi:29881 NextBio:52405 ArrayExpress:Q9UHC9 Bgee:Q9UHC9
CleanEx:HS_NPC1L1 Genevestigator:Q9UHC9 GermOnline:ENSG00000015520
Uniprot:Q9UHC9
Length = 1359
Score = 401 (146.2 bits), Expect = 7.2e-65, Sum P(2) = 7.2e-65
Identities = 108/292 (36%), Positives = 149/292 (51%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
+ +AP L W + VV+ +FLA S+ I GL+Q++ LP+DSYL YF Y
Sbjct: 834 KAYAPFLLHWITRGVVLLLFLALFGVSLYSMCHISVGLDQELALPKDSYLLDYFLFLNRY 893
Query: 212 LRVGPPLYFVVK-DYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAAS 270
VG P+YFV YN+SSE+ N +CS + C++ S +I A+ PE SY+A PA+S
Sbjct: 894 FEVGAPVYFVTTLGYNFSSEAG-MNAICSSAGCNNFSFTQKIQYATEFPEQSYLAIPASS 952
Query: 271 WLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGV-C-KDCTTCFRHS 328
W+DDF+ W +P + CCR +++G VN + C K+C + S
Sbjct: 953 WVDDFIDWLTPSS--CCRLYISGPNKDKFCPST----------VNSLNCLKNCMSITMGS 1000
Query: 329 DLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNG--------------YE 374
RPS EQF + LPWFLN P+ C KGG AYSTSV+L E
Sbjct: 1001 V----RPSVEQFHKYLPWFLNDRPNIKCPKGGLAAYSTSVNLTSDGQVLDTVAILSPRLE 1056
Query: 375 -SGIIQA----------SEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLK 415
SG I A S F +H PL DY +LRAARE ++ ++ L+
Sbjct: 1057 YSGTISAHCNLYLLDSTSRFMAYHKPLKNSQDYTEALRAARELAANITADLR 1108
Score = 304 (112.1 bits), Expect = 7.2e-65, Sum P(2) = 7.2e-65
Identities = 67/156 (42%), Positives = 98/156 (62%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F YIS+ALG +S V SK LGL GV +V+ +V+ ++GFFS +G++S+L+I++V+
Sbjct: 643 IFLYISLALGSYSSWSRVMVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVV 702
Query: 61 PFLVLAVGVDNMCILV---NAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
PFLVL+VG DN+ I V + R+P E E I AL V PS+ L SLSE + F +G
Sbjct: 703 PFLVLSVGADNIFIFVLEYQRLPRRPGE-PREVHIGRALGRVAPSMLLCSLSEAICFFLG 761
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+ PMPA R F++ Q++AFVAL+ +
Sbjct: 762 ALTPMPAVRTFALTSGLAVILDFLLQMSAFVALLSL 797
Score = 44 (20.5 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 53 TLIIMEVIPFLVLAVGV 69
T++++ VIP + LA G+
Sbjct: 354 TILVLSVIPVVALAAGL 370
>UNIPROTKB|G4NE97 [details] [associations]
symbol:MGG_00819 "Niemann-Pick C1 protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000731 InterPro:IPR004765 PROSITE:PS50156
GO:GO:0016021 EMBL:CM001235 GO:GO:0030301 KO:K12385
TIGRFAMs:TIGR00917 RefSeq:XP_003718164.1 ProteinModelPortal:G4NE97
EnsemblFungi:MGG_00819T0 GeneID:2674383 KEGG:mgr:MGG_00819
Uniprot:G4NE97
Length = 1275
Score = 302 (111.4 bits), Expect = 8.9e-63, Sum P(3) = 8.9e-63
Identities = 69/165 (41%), Positives = 106/165 (64%)
Query: 1 MFAYISVALGDTP-RF-------SSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKS 52
MF Y S+ALG T F S F+V SK LG+ G+ +V+LS++ S+G FS G+K
Sbjct: 602 MFLYASIALGSTTLNFREFFRNKSLFFVQSKFGLGIVGIAIVLLSIMASIGLFSWFGLKV 661
Query: 53 TLIIMEVIPFLVLAVGVDNMCILVNAVKRQPM---ELVLETRISNALVEVGPSITLASLS 109
TLII++VIPF+VLAVGVDN+ ++V+ +R + +L +E RI+ AL +GPSI ++++
Sbjct: 662 TLIIVDVIPFIVLAVGVDNIFLIVHEFERVNISHPDLDVELRIAKALGRMGPSILFSAVT 721
Query: 110 EFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEVH 154
E +FA+G+F+ MPA R F++ QVT FV+ + ++
Sbjct: 722 ETASFALGAFVGMPAVRNFAIYAAGAVFINALLQVTMFVSFLTLN 766
Score = 282 (104.3 bits), Expect = 8.9e-63, Sum P(3) = 8.9e-63
Identities = 55/136 (40%), Positives = 82/136 (60%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP L VK VVV VFL A ++L +E GL+Q++ +P DSYL YF++ Y
Sbjct: 817 YAPALLGKKVKAVVVLVFLGVFTAGVSLIPEVELGLDQRVAIPDDSYLIPYFNDLYAYFE 876
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCS-ISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
GPP+YFV K+ N++ + H ++C+ + C+ S+ N + + PE+SYIA P ASW+
Sbjct: 877 SGPPVYFVTKESNFT-QREHQQEVCARFTTCNELSMTNILEQERKRPEISYIASPTASWI 935
Query: 273 DDFLVWTSPE-AFGCC 287
DDF +W P+ CC
Sbjct: 936 DDFFLWLDPDLGESCC 951
Score = 127 (49.8 bits), Expect = 8.9e-63, Sum P(3) = 8.9e-63
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 331 VNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPL 390
++ P ++F L F+ + + +C GG AY +V ++ +E I AS FRT HTPL
Sbjct: 970 MSGMPKGQEFVHYLDKFIQSPTTEECPLGGQAAYGDAVVID-HEKTTIGASHFRTMHTPL 1028
Query: 391 NKQGDYVNSLRAAREFSSRMS 411
Q D++ + +AR ++ +S
Sbjct: 1029 RSQSDFIKAYASARRIANDIS 1049
Score = 44 (20.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 164 KMVVVSVFLAFTVASIALST 183
K++V+S + F ASIAL +
Sbjct: 593 KIIVISYIVMFLYASIALGS 612
>UNIPROTKB|G3V7K5 [details] [associations]
symbol:Cdig2 "RCG41239" species:10116 "Rattus norvegicus"
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0015485
"cholesterol binding" evidence=IEA] [GO:0016242 "negative
regulation of macroautophagy" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0033344 "cholesterol efflux" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0045121 "membrane
raft" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=IEA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0030301
GO:GO:0008158 GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
CTD:4864 TIGRFAMs:TIGR00917 EMBL:CH474073 RefSeq:NP_705888.2
UniGene:Rn.115253 PRIDE:G3V7K5 Ensembl:ENSRNOT00000016167
GeneID:266732 KEGG:rno:266732 NextBio:624576 Uniprot:G3V7K5
Length = 1278
Score = 380 (138.8 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 84/261 (32%), Positives = 143/261 (54%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP L ++ VV++VF+ SIA+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 827 APFLLTDWLRPVVMAVFVGILSFSIAVVNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHS 886
Query: 215 GPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDD 274
GPP+YFV+++ S R N +C CD++SL+ +I A+ + + + +SW+DD
Sbjct: 887 GPPVYFVLEEGYNYSSRRGQNMVCGGMGCDNDSLVQQIFNAAELDTYTRVGFAPSSWIDD 946
Query: 275 FLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNR 334
+ W SP++ CCR + N T+ ++ C C R
Sbjct: 947 YFDWVSPQS-SCCRLY-NVTHQFCNASV-----------IDPTCVRCRPLTPEG---KQR 990
Query: 335 PSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQG 394
P ++F + LP FL+ P+ C KGGH AYS++V++ G ++ I A+ F T+HT L
Sbjct: 991 PQGKEFMKFLPMFLSDNPNPKCGKGGHAAYSSAVNIMGDDT-YIGATYFMTYHTILKTSA 1049
Query: 395 DYVNSLRAAREFSSRMSDTLK 415
DY+++L+ AR +S +++T++
Sbjct: 1050 DYIDALKKARLIASNITETMR 1070
Score = 293 (108.2 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 66/153 (43%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG ++ V SK+ LG++G+++V+ SV S+G FS IG+ TLI++EVI
Sbjct: 632 MFLYISLALGHIQSWNRVLVDSKISLGIAGILIVLSSVTCSLGIFSYIGMPLTLIVIEVI 691
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R E L+ ++ L EV P++ L+S SE AF G+
Sbjct: 692 PFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGA 751
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+ +
Sbjct: 752 LSSMPAVHTFSLFAGMAVLIDFLLQITCFVSFL 784
Score = 38 (18.4 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 148 VALIEVHA-PILGLWGVKMVVVSV 170
+A+I V+ ++ LWG+ + VS+
Sbjct: 1131 IAMILVNMFGVMWLWGISLNAVSL 1154
>UNIPROTKB|F1SBB5 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9823 "Sus
scrofa" [GO:0071404 "cellular response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0033344 "cholesterol efflux" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0016242 "negative regulation of
macroautophagy" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0071404 GeneTree:ENSGT00680000099777 OMA:DGYDLVQ
TIGRFAMs:TIGR00917 EMBL:CU657945 Ensembl:ENSSSCT00000004106
Uniprot:F1SBB5
Length = 1277
Score = 371 (135.7 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 82/261 (31%), Positives = 141/261 (54%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP+L ++ +V++VF+ SIA+ ++E GL+Q + +P DSY+ YF + + YL
Sbjct: 825 YAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSRYLH 884
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFVV++ + + + N +C C+++SL+ +I A+ + + I +SW+D
Sbjct: 885 AGPPVYFVVEEGHNYTSLKGQNMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWID 944
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNN 333
D+ W P++ CCR + N T + V C C +
Sbjct: 945 DYFDWIKPQS-SCCRVY-NST--------------DQFCNASVVDPTCIRCRPLTSEGKQ 988
Query: 334 RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQ 393
RP E F LP FL+ P+ C KGGH AYS++V++ G SG+ A+ F T+HT L
Sbjct: 989 RPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSGV-GATYFMTYHTVLQAS 1047
Query: 394 GDYVNSLRAAREFSSRMSDTL 414
D++++++ AR +S ++ T+
Sbjct: 1048 ADFIDAMQKARLIASNITRTM 1068
Score = 299 (110.3 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 68/153 (44%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ SV S+G FS IGV TLI++EVI
Sbjct: 631 MFLYISIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PS+ L+S SE +AF +G
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGG 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
+PA FS+ Q+T FV+L+
Sbjct: 751 LSVVPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 39 (18.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 144 VTAFVALIEVHAPILGLWGVKMVVVSV 170
VT + L+ + ++ LWG+ + VS+
Sbjct: 1128 VTIAMILVNMFG-VMWLWGISLNAVSL 1153
>UNIPROTKB|P56941 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9823 "Sus
scrofa" [GO:0030301 "cholesterol transport" evidence=ISS]
[GO:0005764 "lysosome" evidence=ISS] [GO:0005576 "extracellular
region" evidence=ISS] [GO:0006486 "protein glycosylation"
evidence=ISS] [GO:0015485 "cholesterol binding" evidence=ISS]
[GO:0007041 "lysosomal transport" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005635 "nuclear
envelope" evidence=ISS] [GO:0042632 "cholesterol homeostasis"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0005783 GO:GO:0005635 GO:GO:0048471 GO:GO:0005576
GO:GO:0005887 GO:GO:0031902 GO:GO:0005765 GO:GO:0008206
GO:GO:0006486 GO:GO:0008203 GO:GO:0005764 GO:GO:0015485
GO:GO:0042632 GO:GO:0007041 GO:GO:0030301 GO:GO:0008158
eggNOG:NOG149152 KO:K12385 CTD:4864 HOVERGEN:HBG003913
OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917 HOGENOM:HOG000036674
EMBL:AF169635 RefSeq:NP_999487.1 UniGene:Ssc.1533
ProteinModelPortal:P56941 STRING:P56941 GeneID:397591
KEGG:ssc:397591 Uniprot:P56941
Length = 1277
Score = 371 (135.7 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 82/261 (31%), Positives = 141/261 (54%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP+L ++ +V++VF+ SIA+ ++E GL+Q + +P DSY+ YF + + YL
Sbjct: 825 YAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSRYLH 884
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFVV++ + + + N +C C+++SL+ +I A+ + + I +SW+D
Sbjct: 885 AGPPVYFVVEEGHNYTSLKGQNMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWID 944
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNN 333
D+ W P++ CCR + N T + V C C +
Sbjct: 945 DYFDWIKPQS-SCCRVY-NST--------------DQFCNASVVDPTCIRCRPLTSEGKQ 988
Query: 334 RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQ 393
RP E F LP FL+ P+ C KGGH AYS++V++ G SG+ A+ F T+HT L
Sbjct: 989 RPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSGV-GATYFMTYHTVLQAS 1047
Query: 394 GDYVNSLRAAREFSSRMSDTL 414
D++++++ AR +S ++ T+
Sbjct: 1048 ADFIDAMQKARLIASNITRTM 1068
Score = 299 (110.3 bits), Expect = 3.2e-61, Sum P(2) = 3.2e-61
Identities = 68/153 (44%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ SV S+G FS IGV TLI++EVI
Sbjct: 631 MFLYISIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGVPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PS+ L+S SE +AF +G
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGG 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
+PA FS+ Q+T FV+L+
Sbjct: 751 LSVVPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 39 (18.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 144 VTAFVALIEVHAPILGLWGVKMVVVSV 170
VT + L+ + ++ LWG+ + VS+
Sbjct: 1128 VTIAMILVNMFG-VMWLWGISLNAVSL 1153
>MGI|MGI:1097712 [details] [associations]
symbol:Npc1 "Niemann Pick type C1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0005768
"endosome" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006486 "protein
glycosylation" evidence=ISO;IDA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006914 "autophagy" evidence=ISO] [GO:0007628 "adult walking
behavior" evidence=IGI] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0008202 "steroid metabolic process" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IGI;IMP] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0031982 "vesicle" evidence=IDA] [GO:0033344 "cholesterol
efflux" evidence=ISO;IMP] [GO:0042493 "response to drug"
evidence=IDA] [GO:0042632 "cholesterol homeostasis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0071383 "cellular response to steroid
hormone stimulus" evidence=IDA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IDA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 EMBL:AF003348 MGI:MGI:1097712
GO:GO:0005783 GO:GO:0005886 GO:GO:0005794 GO:GO:0005635
GO:GO:0048471 GO:GO:0005576 GO:GO:0005887 GO:GO:0031902
GO:GO:0005765 GO:GO:0042493 GO:GO:0008206 GO:GO:0005768
GO:GO:0006914 GO:GO:0006486 GO:GO:0008203 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0015485 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0007041 GO:GO:0007628
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
eggNOG:NOG149152 GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
CTD:4864 HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917
EMBL:AF003349 EMBL:AC102096 EMBL:AC102248 EMBL:CH466622
IPI:IPI00132600 PIR:T30188 RefSeq:NP_032746.2 UniGene:Mm.3484
ProteinModelPortal:O35604 SMR:O35604 STRING:O35604
PhosphoSite:O35604 PaxDb:O35604 PRIDE:O35604
Ensembl:ENSMUST00000025279 GeneID:18145 KEGG:mmu:18145
HOGENOM:HOG000036674 InParanoid:O35604 ChiTaRS:NPC1 CleanEx:MM_NPC1
Genevestigator:O35604 GermOnline:ENSMUSG00000024413 Uniprot:O35604
Length = 1277
Score = 368 (134.6 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 85/265 (32%), Positives = 146/265 (55%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP+L ++ +VV+VF+ S+A+ +++ GL+Q + +P DSY+ YF + +YL
Sbjct: 826 APLLLKDWLRPIVVAVFVGVLSFSVAVVNKVDIGLDQSLSMPNDSYVIDYFKSLAQYLHS 885
Query: 215 GPPLYFVVKDYNYSSESRH-TNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFV+++ Y+ SR N +C CD++SL+ +I A+ + + + +SW+D
Sbjct: 886 GPPVYFVLEE-GYNYSSRKGQNMVCGGMGCDNDSLVQQIFNAAELDTYTRVGFAPSSWID 944
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLV-- 331
D+ W SP++ CCR + N T+ N D TC R L
Sbjct: 945 DYFDWVSPQS-SCCRLY-NVTHQF----------------CNASVMD-PTCVRCRPLTPE 985
Query: 332 -NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPL 390
RP ++F + LP FL+ P+ C KGGH AY ++V++ G ++ I A+ F T+HT L
Sbjct: 986 GKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYGSAVNIVGDDT-YIGATYFMTYHTIL 1044
Query: 391 NKQGDYVNSLRAAREFSSRMSDTLK 415
DY ++++ AR +S +++T++
Sbjct: 1045 KTSADYTDAMKKARLIASNITETMR 1069
Score = 295 (108.9 bits), Expect = 1.7e-60, Sum P(2) = 1.7e-60
Identities = 67/153 (43%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ SV S+G FS +G+ TLI++EVI
Sbjct: 631 MFLYISLALGHIQSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYMGMPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R E L+ ++ L EV P++ L+S SE AF G+
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGA 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSSMPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 38 (18.4 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 148 VALIEVHA-PILGLWGVKMVVVSV 170
+A+I V+ ++ LWG+ + VS+
Sbjct: 1130 IAMILVNMFGVMWLWGISLNAVSL 1153
>DICTYBASE|DDB_G0269158 [details] [associations]
symbol:npcA "Niemann-Pick C type protein"
species:44689 "Dictyostelium discoideum" [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 dictyBase:DDB_G0269158
GO:GO:0016021 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0030301 GO:GO:0008158 eggNOG:NOG149152 KO:K12385
TIGRFAMs:TIGR00917 ProtClustDB:CLSZ2430881 EMBL:AF202725
EMBL:AF202726 RefSeq:XP_646800.1 ProteinModelPortal:Q9TVK6
EnsemblProtists:DDB0191127 GeneID:8617773 KEGG:ddi:DDB_G0269158
InParanoid:Q9TVK6 OMA:SHVVKYF Uniprot:Q9TVK6
Length = 1342
Score = 286 (105.7 bits), Expect = 8.0e-60, Sum P(3) = 8.0e-60
Identities = 75/166 (45%), Positives = 98/166 (59%)
Query: 1 MFAYISVALGDT---P-RFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLII 56
MF Y+S++LG P RF S +V S+ LG G+I+V S++ SVG S +K+TLII
Sbjct: 674 MFFYVSLSLGSYYPFPTRFLSLFVRSRFALGFCGIIIVAASIVISVGVCSMANLKATLII 733
Query: 57 MEVIPFLVLAVGVDNMCILVNA------VKRQP--MELVLETR---ISNALVEVGPSITL 105
EVIPFLVLA+GVDN+ I+VN V+ P +L T ++ L +VGPSI L
Sbjct: 734 SEVIPFLVLAIGVDNIFIIVNTFESLHVVRYDPHTRAAILPTSEDSLARTLAKVGPSIAL 793
Query: 106 ASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
ASLSE LAF +GS MPA + FS QV+AF AL+
Sbjct: 794 ASLSESLAFLLGSLTKMPAVQAFSYYAALAIFVDFLLQVSAFSALL 839
Score = 263 (97.6 bits), Expect = 8.0e-60, Sum P(3) = 8.0e-60
Identities = 57/149 (38%), Positives = 89/149 (59%)
Query: 148 VALIEVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDN 207
V + +AP L KM+V+ F+ + I + ++ GL+Q++ LP +SYLQGYF+N
Sbjct: 910 VVFKKFYAPFLLHPITKMLVIIFFVGLLLTGINFAFQVSIGLDQRVALPSNSYLQGYFNN 969
Query: 208 TTEYLRVGPPLYFVVK-DYNYSS-ESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIA 265
L VGPP Y V+K DYNY+ ES+ N+LC++ CD +S++N + A P +I
Sbjct: 970 MANLLEVGPPFYIVIKGDYNYTDFESQ--NKLCTMGGCDKDSIVNVFNNA---P---FIN 1021
Query: 266 KPAASWLDDFLVWTSPEAFGCCRKFVNGT 294
K +SWLDD++ + + CC K+ NG+
Sbjct: 1022 KGISSWLDDYISFAQAQG-SCCLKYPNGS 1049
Score = 135 (52.6 bits), Expect = 8.0e-60, Sum P(3) = 8.0e-60
Identities = 32/89 (35%), Positives = 46/89 (51%)
Query: 315 NGVCKDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYE 374
NG C CF S+ RP + F + LP+FLN +A C G AY++ +
Sbjct: 1053 NGADPSCAPCF--SNNAQGRPDPQSFIQYLPFFLNVSNTASCPLAGL-AYTSDAHI---V 1106
Query: 375 SGIIQASEFRTFHTPLNKQGDYVNSLRAA 403
+G I AS F +HT L Q DY+N+++ A
Sbjct: 1107 NGTIVASRFDGYHTTLRTQDDYINAVQTA 1135
Score = 45 (20.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 220 FVVKDYNYSSESRHTNQLCSISQC-DSNS---LLNEISRAS-SIPELSYIAKPAASWLDD 274
+V + Y S + + CS QC D+ + EI + S+P+ +Y+ +L
Sbjct: 193 WVFNETGYISPTAPCAESCSCDQCGDACGPPPTVGEIGLFNNSLPQ-TYLFNHEIPFLSV 251
Query: 275 FLVWT 279
+++WT
Sbjct: 252 WMIWT 256
>UNIPROTKB|Q9JLG3 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 protein" species:10029
"Cricetulus griseus" [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0007041 "lysosomal
transport" evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 CTD:4864
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF182744
RefSeq:NP_001233616.1 ProteinModelPortal:Q9JLG3 GeneID:100689424
Uniprot:Q9JLG3
Length = 1277
Score = 361 (132.1 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 77/260 (29%), Positives = 142/260 (54%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP L ++ +V++VF+ SIA+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 826 APFLLKDWLRPIVIAVFVGVLSFSIAVMNKVEIGLDQSLSMPNDSYVIDYFKSLGQYLHS 885
Query: 215 GPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDD 274
GPP+YFV+++ + + + N +C CD++SL+ +I A+ + + I +SW+DD
Sbjct: 886 GPPVYFVLEEGHDYTTHKGQNMVCGGMGCDNDSLVQQIFNAAELDNYTRIGFAPSSWIDD 945
Query: 275 FLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNR 334
+ W +P++ CCR + N T+ ++ C C R
Sbjct: 946 YFDWVAPQS-SCCRLY-NATHQFCNASV-----------IDPTCIRCRPLTPEG---KQR 989
Query: 335 PSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQG 394
P ++F + LP FL+ P+ C KGGH AYS++V++ G ++ + A+ F T+HT L
Sbjct: 990 PQGKEFMKFLPMFLSDNPNPKCGKGGHAAYSSAVNIIGDDT-YVGATYFMTYHTVLKTSA 1048
Query: 395 DYVNSLRAAREFSSRMSDTL 414
DY+++++ A+ + +++T+
Sbjct: 1049 DYIDAMKKAQLVARNITETM 1068
Score = 294 (108.6 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 67/153 (43%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ SV S+G FS +G+ TLI++EVI
Sbjct: 631 MFLYISLALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGVFSYMGMPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R E L+ ++ L EV P++ L+S SE AF G+
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGA 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSSMPAVHTFSLFAGLAVLIDFLLQITCFVSLL 783
>ASPGD|ASPL0000051085 [details] [associations]
symbol:AN2119 species:162425 "Emericella nidulans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IDA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0046624 "sphingolipid transporter activity"
evidence=IEA] [GO:0006665 "sphingolipid metabolic process"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
EMBL:BN001307 EMBL:AACD01000032 GO:GO:0030301 GO:GO:0008158
eggNOG:NOG149152 KO:K12385 TIGRFAMs:TIGR00917 HOGENOM:HOG000036674
OrthoDB:EOG48D43G RefSeq:XP_659723.1 ProteinModelPortal:Q5BBG1
EnsemblFungi:CADANIAT00008794 GeneID:2875771 KEGG:ani:AN2119.2
OMA:ERDERAW Uniprot:Q5BBG1
Length = 1271
Score = 298 (110.0 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 74/166 (44%), Positives = 104/166 (62%)
Query: 1 MFAYISVALGD-TPRFSSFY-------VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKS 52
MF Y S+ALG T + S V SK LG+ G+++V++SV SVG FSA GVK
Sbjct: 604 MFIYASLALGSVTMTWRSLINNPANALVQSKFTLGVVGIVIVLMSVSASVGLFSAAGVKV 663
Query: 53 TLIIMEVIPFLVLAVGVDNMCILVNAVKR----QPMELVLETRISNALVEVGPSITLASL 108
TLII EVIPFLVLAVGVDN+ ++V +R P E + E RIS A+ +GPSI L+++
Sbjct: 664 TLIIAEVIPFLVLAVGVDNIFLIVYEFERLNVSHPDEEIDE-RISRAIGRIGPSIFLSAI 722
Query: 109 SEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEVH 154
+E +AFA+G F+ MPA R F++ Q+T FV+++ ++
Sbjct: 723 TETVAFALGVFVGMPAVRNFAIYAAGAVFINAVLQITMFVSVLALN 768
Score = 281 (104.0 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 58/137 (42%), Positives = 81/137 (59%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
+V+AP+L VK+VVV FL A +AL+ + GL+Q+I LP DSYL YFD+ +EY
Sbjct: 813 KVYAPLLLNRRVKVVVVITFLGILAAGLALTPEVAMGLDQRIALPSDSYLIDYFDDLSEY 872
Query: 212 LRVGPPLYFVVKDYNYSSESRHTNQLCS-ISQCDSNSLLNEISRASSIPELSYIAKPAAS 270
GPP+YFV ++ N + H QLC + C+ SL + + S +SYIA AS
Sbjct: 873 FNSGPPVYFVTRNVNITKRE-HQRQLCGRFTTCEEYSLPFVLEQESKRSNVSYIAGATAS 931
Query: 271 WLDDFLVWTSPEAFGCC 287
W+DDF W +P+ CC
Sbjct: 932 WIDDFFYWLNPQQ-DCC 947
Score = 97 (39.2 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 335 PSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQG 394
P +F L ++ + A C GG YS ++ + AS FRT HTPL Q
Sbjct: 970 PEGAEFIHYLEKWIKSPTDASCPLGGKAPYSNALVFDPKRI-TTNASHFRTSHTPLRTQD 1028
Query: 395 DYVNSLRAAREFSSRMS 411
D++ S +AR + +S
Sbjct: 1029 DFIKSYISARRIADGLS 1045
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 77 NAVKRQPMELVLETRIS--NALVEVGPSIT----LASLSEFLAFAVGSFIPMPACR 126
N R+P V E ++ A + GP + +LS+ L A G PAC+
Sbjct: 54 NDAAREPEAAVREKLVNLCGAKWQEGPVCCEEEQIDALSKNLKLAEGIISSCPACK 109
>UNIPROTKB|B4DET3 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0030301 GO:GO:0008158 UniGene:Hs.464779
UniGene:Hs.715623 HGNC:HGNC:7897 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 HOGENOM:HOG000036674 EMBL:AC026634 EMBL:AC010853
EMBL:AK293779 IPI:IPI00646796 STRING:B4DET3 Ensembl:ENST00000412552
UCSC:uc010xaz.2 Uniprot:B4DET3
Length = 960
Score = 347 (127.2 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 77/264 (29%), Positives = 142/264 (53%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V+++F+ SIA+ +++ GL+Q + +P DSY+ YF + ++YL
Sbjct: 507 YSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLH 566
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFV+++ + + S+ N +C C+++SL+ +I A+ + + I +SW+D
Sbjct: 567 AGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWID 626
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNN 333
D+ W P++ CCR V+ V+ C C
Sbjct: 627 DYFDWVKPQS-SCCR--VDNITDQFCNASV----------VDPACVRCRPLTPEG---KQ 670
Query: 334 RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVD-LNGYESGIIQASEFRTFHTPLNK 392
RP F LP FL+ P+ C KGGH AYS++V+ L G+ + + A+ F T+HT L
Sbjct: 671 RPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRV-GATYFMTYHTVLQT 729
Query: 393 QGDYVNSLRAAREFSSRMSDTLKV 416
D++++L+ AR +S +++T+ +
Sbjct: 730 SADFIDALKKARLIASNVTETMGI 753
Score = 298 (110.0 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 69/153 (45%), Positives = 94/153 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG V SKV LG++G+++V+ SV S+G FS IG+ TLI++EVI
Sbjct: 313 MFLYISLALGHMKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVI 372
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV A +R L+ ++ L EV PS+ L+S SE +AF +G+
Sbjct: 373 PFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGA 432
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 433 LSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLL 465
Score = 39 (18.8 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 146 AFVALIEVHA-PILGLWGVKMVVVSV 170
A +A++ V+ ++ LWG+ + VS+
Sbjct: 811 ATIAMVLVNMFGVMWLWGISLNAVSL 836
>UNIPROTKB|K7EQ23 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
HGNC:HGNC:7897 TIGRFAMs:TIGR00917 EMBL:AC026634 EMBL:AC010853
Ensembl:ENST00000591051 Uniprot:K7EQ23
Length = 971
Score = 347 (127.2 bits), Expect = 5.7e-59, Sum P(2) = 5.7e-59
Identities = 77/264 (29%), Positives = 142/264 (53%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V+++F+ SIA+ +++ GL+Q + +P DSY+ YF + ++YL
Sbjct: 518 YSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLH 577
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFV+++ + + S+ N +C C+++SL+ +I A+ + + I +SW+D
Sbjct: 578 AGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWID 637
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNN 333
D+ W P++ CCR V+ V+ C C
Sbjct: 638 DYFDWVKPQS-SCCR--VDNITDQFCNASV----------VDPACVRCRPLTPEG---KQ 681
Query: 334 RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVD-LNGYESGIIQASEFRTFHTPLNK 392
RP F LP FL+ P+ C KGGH AYS++V+ L G+ + + A+ F T+HT L
Sbjct: 682 RPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRV-GATYFMTYHTVLQT 740
Query: 393 QGDYVNSLRAAREFSSRMSDTLKV 416
D++++L+ AR +S +++T+ +
Sbjct: 741 SADFIDALKKARLIASNVTETMGI 764
Score = 298 (110.0 bits), Expect = 5.7e-59, Sum P(2) = 5.7e-59
Identities = 69/153 (45%), Positives = 94/153 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG V SKV LG++G+++V+ SV S+G FS IG+ TLI++EVI
Sbjct: 324 MFLYISLALGHMKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVI 383
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV A +R L+ ++ L EV PS+ L+S SE +AF +G+
Sbjct: 384 PFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGA 443
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 444 LSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLL 476
Score = 39 (18.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 146 AFVALIEVHA-PILGLWGVKMVVVSV 170
A +A++ V+ ++ LWG+ + VS+
Sbjct: 822 ATIAMVLVNMFGVMWLWGISLNAVSL 847
>UNIPROTKB|Q9TT75 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 disease protein"
species:9986 "Oryctolagus cuniculus" [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007041
"lysosomal transport" evidence=ISS] [GO:0008206 "bile acid
metabolic process" evidence=ISS] [GO:0042632 "cholesterol
homeostasis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0008206 GO:GO:0005768 GO:GO:0006914
GO:GO:0006897 GO:GO:0005764 GO:GO:0045121 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0007041 GO:GO:0007628
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
eggNOG:NOG149152 CTD:4864 HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z
TIGRFAMs:TIGR00917 HOGENOM:HOG000036674 EMBL:AF202730
RefSeq:NP_001075540.1 UniGene:Ocu.2405 ProteinModelPortal:Q9TT75
STRING:Q9TT75 GeneID:100008746 Uniprot:Q9TT75
Length = 1286
Score = 345 (126.5 bits), Expect = 9.3e-59, Sum P(2) = 9.3e-59
Identities = 80/263 (30%), Positives = 136/263 (51%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V++VF+ SIA+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 834 YSPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVVDYFKSLGQYLH 893
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFV+++ + + + N +C CD++SL+ +I A+ + + I +SW+D
Sbjct: 894 AGPPVYFVLEEGHNYTSLQGQNMVCGGLGCDNDSLVQQIFNAAQLDNYTRIGFAPSSWID 953
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNN 333
D+ W P++ CCR N T V+ C C
Sbjct: 954 DYFDWVKPQS-SCCR-VSNVTEQFCNASV-----------VDPACVRCRPLTPEG---KQ 997
Query: 334 RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDL--NGYESGIIQASEFRTFHTPLN 391
RP E F LP FL+ P+ C KGGH AY T+V++ NG E G A+ F T+HT L
Sbjct: 998 RPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYGTAVNILGNGTEVG---ATYFMTYHTVLQ 1054
Query: 392 KQGDYVNSLRAAREFSSRMSDTL 414
D++++++ A+ + + T+
Sbjct: 1055 TSADFIDAMKKAQLIAGNATATM 1077
Score = 302 (111.4 bits), Expect = 9.3e-59, Sum P(2) = 9.3e-59
Identities = 69/153 (45%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG F V SKV LG++G+++V+ SV S+G FS IG+ TLI++EVI
Sbjct: 640 MFLYISLALGHIKSCRRFLVDSKVSLGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVI 699
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PSI L+S +E +AF +G
Sbjct: 700 PFLVLAVGVDNIFILVQTYQRDERLQGETLDQQLGRVLGEVAPSIFLSSFAETVAFFLGG 759
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 760 LSVMPAVHTFSLFAGMAVFIDFLLQITCFVSLL 792
Score = 39 (18.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 144 VTAFVALIEVHAPILGLWGVKMVVVSV 170
VT + L+ + ++ LWG+ + VS+
Sbjct: 1137 VTITMILVNMFG-VMWLWGISLNAVSL 1162
>UNIPROTKB|O15118 [details] [associations]
symbol:NPC1 "Niemann-Pick C1 protein" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=IEA] [GO:0071404 "cellular response to
low-density lipoprotein particle stimulus" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis"
evidence=ISS;IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0030301 "cholesterol transport" evidence=IDA]
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0015485 "cholesterol binding"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=IDA]
[GO:0006914 "autophagy" evidence=IGI] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0004888 "transmembrane signaling
receptor activity" evidence=TAS] [GO:0015248 "sterol transporter
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0033344 "cholesterol efflux" evidence=IDA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005794
GO:GO:0005635 GO:GO:0048471 GO:GO:0005576 GO:GO:0005887
GO:GO:0031902 GO:GO:0005765 GO:GO:0042493 GO:GO:0008206
GO:GO:0006914 GO:GO:0006486 GO:GO:0008203 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0015485 GO:GO:0033344
GO:GO:0042632 GO:GO:0031982 GO:GO:0004888 GO:GO:0007041
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0015248 GO:GO:0071404 eggNOG:NOG149152 KO:K12385 OMA:DGYDLVQ
EMBL:AF002020 EMBL:AF157379 EMBL:AF157365 EMBL:AF157366
EMBL:AF157367 EMBL:AF157368 EMBL:AF157369 EMBL:AF157370
EMBL:AF157371 EMBL:AF157372 EMBL:AF157373 EMBL:AF157374
EMBL:AF157375 EMBL:AF157376 EMBL:AF157377 EMBL:AF157378
EMBL:AF338230 EMBL:AH009108 EMBL:BC063302 IPI:IPI00005107
RefSeq:NP_000262.2 UniGene:Hs.464779 UniGene:Hs.715623 PDB:3GKH
PDB:3GKI PDB:3GKJ PDBsum:3GKH PDBsum:3GKI PDBsum:3GKJ
ProteinModelPortal:O15118 SMR:O15118 IntAct:O15118 STRING:O15118
TCDB:2.A.6.6.1 PhosphoSite:O15118 PaxDb:O15118 PeptideAtlas:O15118
PRIDE:O15118 Ensembl:ENST00000269228 GeneID:4864 KEGG:hsa:4864
UCSC:uc002kum.4 CTD:4864 GeneCards:GC18M021111 H-InvDB:HIX0039703
HGNC:HGNC:7897 HPA:HPA026618 MIM:257220 MIM:607623
neXtProt:NX_O15118 Orphanet:216986 Orphanet:216981 Orphanet:216978
Orphanet:216975 Orphanet:216972 PharmGKB:PA31698 HOVERGEN:HBG003913
InParanoid:O15118 OrthoDB:EOG46DM1Z PhylomeDB:O15118
ChEMBL:CHEMBL1293277 EvolutionaryTrace:O15118 GenomeRNAi:4864
NextBio:18738 ArrayExpress:O15118 Bgee:O15118 CleanEx:HS_NPC1
Genevestigator:O15118 GermOnline:ENSG00000141458 TIGRFAMs:TIGR00917
Uniprot:O15118
Length = 1278
Score = 347 (127.2 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 77/264 (29%), Positives = 142/264 (53%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V+++F+ SIA+ +++ GL+Q + +P DSY+ YF + ++YL
Sbjct: 825 YSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLH 884
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLD 273
GPP+YFV+++ + + S+ N +C C+++SL+ +I A+ + + I +SW+D
Sbjct: 885 AGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWID 944
Query: 274 DFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNN 333
D+ W P++ CCR V+ V+ C C
Sbjct: 945 DYFDWVKPQS-SCCR--VDNITDQFCNASV----------VDPACVRCRPLTPEG---KQ 988
Query: 334 RPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVD-LNGYESGIIQASEFRTFHTPLNK 392
RP F LP FL+ P+ C KGGH AYS++V+ L G+ + + A+ F T+HT L
Sbjct: 989 RPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRV-GATYFMTYHTVLQT 1047
Query: 393 QGDYVNSLRAAREFSSRMSDTLKV 416
D++++L+ AR +S +++T+ +
Sbjct: 1048 SADFIDALKKARLIASNVTETMGI 1071
Score = 298 (110.0 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 69/153 (45%), Positives = 94/153 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG V SKV LG++G+++V+ SV S+G FS IG+ TLI++EVI
Sbjct: 631 MFLYISLALGHMKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV A +R L+ ++ L EV PS+ L+S SE +AF +G+
Sbjct: 691 PFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGA 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLL 783
Score = 39 (18.8 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 146 AFVALIEVHA-PILGLWGVKMVVVSV 170
A +A++ V+ ++ LWG+ + VS+
Sbjct: 1129 ATIAMVLVNMFGVMWLWGISLNAVSL 1154
>ZFIN|ZDB-GENE-030131-3161 [details] [associations]
symbol:npc1 "Niemann-Pick disease, type C1"
species:7955 "Danio rerio" [GO:0030301 "cholesterol transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0006869 "lipid transport" evidence=ISS]
[GO:0055113 "epiboly involved in gastrulation with mouth forming
second" evidence=IMP] [GO:0035855 "megakaryocyte development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 ZFIN:ZDB-GENE-030131-3161
GO:GO:0016021 GO:GO:0006869 GO:GO:0001666 GO:GO:0055113
GO:GO:0030301 GO:GO:0008158 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00917 EMBL:FP236166 EMBL:FP245481 IPI:IPI00861743
Ensembl:ENSDART00000103596 ArrayExpress:F1QNG7 Bgee:F1QNG7
Uniprot:F1QNG7
Length = 1276
Score = 339 (124.4 bits), Expect = 6.4e-58, Sum P(2) = 6.4e-58
Identities = 83/238 (34%), Positives = 126/238 (52%)
Query: 152 EVHAP-ILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTE 210
+++AP IL W V+ +VV+VF+ SIA+ ++E GLEQ + +P DSY+ YF N ++
Sbjct: 823 KIYAPFILKDW-VRPLVVAVFVGMLSFSIAVVNKVEIGLEQTLSMPDDSYVLNYFGNLSK 881
Query: 211 YLRVGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAA 269
YL GPP+YFVV+D ++Y + N +C C+++SL+ +I AS + + I+ +
Sbjct: 882 YLHTGPPVYFVVEDGHDYKTFEGQ-NAVCGGVGCNNDSLVQQIYTASLMSNYTRISNVPS 940
Query: 270 SWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSD 329
SWLDD+ W P++ CCR + N T + V K C C +
Sbjct: 941 SWLDDYFDWVKPQST-CCR-YYNST--------------GAFCNASVVDKSCVHCRPMTS 984
Query: 330 LVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDL--NGYESGIIQASEFRT 385
RP+ +F LP FL+ P+ C KGGH AY T+VDL N + G + T
Sbjct: 985 SGKQRPNGTEFMHFLPMFLSDNPNIKCGKGGHAAYGTAVDLKDNNTDVGATYFMSYHT 1042
Score = 300 (110.7 bits), Expect = 6.4e-58, Sum P(2) = 6.4e-58
Identities = 68/153 (44%), Positives = 95/153 (62%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YISVALG + V SK+ LG++G+++V+ SV S+G FS IG+ TLI++EVI
Sbjct: 633 MFVYISVALGRINSCRTLLVDSKISLGIAGILIVLSSVACSLGIFSYIGIPLTLIVIEVI 692
Query: 61 PFLVLAVGVDNMCILVNAVKRQPM--ELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ I+V +R E L +I L +V PS+ L+S SE +AF +G+
Sbjct: 693 PFLVLAVGVDNIFIIVQTYQRDERMPEEELHQQIGRILGDVAPSMFLSSFSETVAFFLGA 752
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA R FS+ Q++ FV+L+
Sbjct: 753 LSTMPAVRTFSLFAGLAIFIDFLLQISCFVSLL 785
Score = 175 (66.7 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 317 VCKDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESG 376
V K C C + RP+ +F LP FL+ P+ C KGGH AY T+VDL +
Sbjct: 972 VDKSCVHCRPMTSSGKQRPNGTEFMHFLPMFLSDNPNIKCGKGGHAAYGTAVDLKDNNTD 1031
Query: 377 IIQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTL 414
+ A+ F ++HT L D++N+++ ARE + ++ TL
Sbjct: 1032 V-GATYFMSYHTILKNSSDFINAMKMARELTDNITQTL 1068
Score = 42 (19.8 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
Identities = 17/72 (23%), Positives = 40/72 (55%)
Query: 52 STLIIMEVIPFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEF 111
ST++I +I F+ ++V + +N+ + L+++++IS + G I L+S++
Sbjct: 624 STIVISYIIMFVYISVALGR----INSCRT----LLVDSKISLGIA--GILIVLSSVA-- 671
Query: 112 LAFAVGSFIPMP 123
+ + S+I +P
Sbjct: 672 CSLGIFSYIGIP 683
Score = 42 (19.8 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 10/39 (25%), Positives = 24/39 (61%)
Query: 144 VTAFVALIEVHAPILGLWGVKMVVVSVFLAFTVASIALS 182
VTA + E+ + +L + + M+++++F + SI+L+
Sbjct: 1111 VTAVLLGFELWSAVLVCFTIAMILINMFGVMWLWSISLN 1149
Score = 37 (18.1 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 163 VKMVVVSVFLAFTVASIALSTRIEA 187
V +V+S + F S+AL RI +
Sbjct: 623 VSTIVISYIIMFVYISVALG-RINS 646
>UNIPROTKB|B7ZLE6 [details] [associations]
symbol:NPC1L1 "Niemann-Pick C1-like protein 1" species:9606
"Homo sapiens" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 EMBL:AC004938 HOVERGEN:HBG003913
UniGene:Hs.567486 HGNC:HGNC:7898 EMBL:BC143756 IPI:IPI01013791
SMR:B7ZLE6 STRING:B7ZLE6 Ensembl:ENST00000546276 UCSC:uc011kbw.2
Uniprot:B7ZLE6
Length = 1286
Score = 604 (217.7 bits), Expect = 1.0e-57, P = 1.0e-57
Identities = 155/421 (36%), Positives = 227/421 (53%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F YIS+ALG +S V SK LGL GV +V+ +V+ ++GFFS +G++S+L+I++V+
Sbjct: 643 IFLYISLALGSYSSWSRVMVDSKATLGLGGVAVVLGAVMAAMGFFSYLGIRSSLVILQVV 702
Query: 61 PFLVLAVGVDNMCILV---NAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
PFLVL+VG DN+ I V + R+P E E I AL V PS+ L SLSE + F +G
Sbjct: 703 PFLVLSVGADNIFIFVLEYQRLPRRPGE-PREVHIGRALGRVAPSMLLCSLSEAICFFLG 761
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEVHAPILGLWGVKMVVVSVFLAFTVA 177
+ PMPA R F++ Q++AFVAL+ + + ++ V +
Sbjct: 762 ALTPMPAVRTFALTSGLAVILDFLLQMSAFVALLSLDSKRQE--ASRLDVCCCVKPQELP 819
Query: 178 SIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVK-DYNYSSESRHTNQ 236
+ G Q+ P +L + T + VG P+YFV YN+SSE+ N
Sbjct: 820 PPGQGEGLLLGFFQKAYAP---FLLHWI---TRGVVVGAPVYFVTTLGYNFSSEAG-MNA 872
Query: 237 LCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYX 296
+CS + C++ S +I A+ PE SY+A PA+SW+DDF+ W +P + CCR +++G
Sbjct: 873 ICSSAGCNNFSFTQKIQYATEFPEQSYLAIPASSWVDDFIDWLTPSS--CCRLYISGPNK 930
Query: 297 XXXXXXXXXXXXXXXXGVNGV-C-KDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSA 354
VN + C K+C + S RPS EQF + LPWFLN P+
Sbjct: 931 DKFCPST----------VNSLNCLKNCMSITMGSV----RPSVEQFHKYLPWFLNDRPNI 976
Query: 355 DCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTL 414
C KGG AYSTSV+L G + AS F +H PL DY +LRAARE ++ ++ L
Sbjct: 977 KCPKGGLAAYSTSVNLTS--DGQVLASRFMAYHKPLKNSQDYTEALRAARELAANITADL 1034
Query: 415 K 415
+
Sbjct: 1035 R 1035
>UNIPROTKB|F1NQT4 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0016242
"negative regulation of macroautophagy" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0033344 "cholesterol efflux"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0071383 "cellular response
to steroid hormone stimulus" evidence=IEA] [GO:0071404 "cellular
response to low-density lipoprotein particle stimulus"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0008158 GO:GO:0071383 GO:GO:0016242 GO:GO:0071404
GeneTree:ENSGT00680000099777 OMA:DGYDLVQ TIGRFAMs:TIGR00917
EMBL:AADN02021353 IPI:IPI00572808 Ensembl:ENSGALT00000024240
Uniprot:F1NQT4
Length = 1278
Score = 309 (113.8 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 68/153 (44%), Positives = 97/153 (63%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG + V SK+ LG++G+++V+ SV S+G FS GV TLI+ EVI
Sbjct: 632 MFVYISIALGHIQSWGRLLVDSKISLGIAGILIVLSSVACSIGIFSYFGVPVTLIVAEVI 691
Query: 61 PFLVLAVGVDNMCILVNAVKR-QPME-LVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLA+GVDN+ I+V ++R + +E L+ +I L +V PS+ L+S SE +AF +G+
Sbjct: 692 PFLVLAIGVDNLFIIVQTLQRDERLEGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGT 751
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA R FS+ QVT FV+L+
Sbjct: 752 LSTMPAVRTFSLFAGMAVLIDFILQVTCFVSLL 784
Score = 308 (113.5 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 71/226 (31%), Positives = 117/226 (51%)
Query: 147 FVALIEVHAP-ILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYF 205
F+ +++P +L W ++ +V+++F+ S A+ +E GL+Q + +P DSY+ YF
Sbjct: 819 FLFFKNLYSPYLLKDW-MRPIVIALFVGLLSFSTAVIHNVEIGLDQSLSMPDDSYVMNYF 877
Query: 206 DNTTEYLRVGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYI 264
+Y+ GPP+YFV+++ +NY+S N +C + C+++SL+ ++ A+ I + I
Sbjct: 878 KQLGKYMHAGPPVYFVLEEGHNYTSLEGQ-NMVCGGTGCNNDSLVQQVFNAAEISSYTRI 936
Query: 265 AKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTC 324
+SW+DD+ W P++ CCR + N T CT C
Sbjct: 937 GYAPSSWIDDYFDWVKPQS-SCCRVY-NTTGQFCNASVTD--------------PSCTRC 980
Query: 325 FRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDL 370
S RP E F LP FL+ P+ C KGGH AYS++VDL
Sbjct: 981 RPLSQEGKQRPQGEDFMTFLPMFLSDNPNPKCGKGGHAAYSSAVDL 1026
Score = 182 (69.1 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 321 CTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQA 380
CT C S RP E F LP FL+ P+ C KGGH AYS++VDL ++ + A
Sbjct: 977 CTRCRPLSQEGKQRPQGEDFMTFLPMFLSDNPNPKCGKGGHAAYSSAVDLIKNKTDV-GA 1035
Query: 381 SEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLKV 416
+ F T+HT L K DY+++++ AR+ + +++T+ +
Sbjct: 1036 TYFMTYHTVLKKSSDYIDAMKKARDIADNITETMGI 1071
Score = 45 (20.9 bits), Expect = 6.1e-28, Sum P(2) = 6.1e-28
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSV 170
VT +A+I V+ ++ LWG+ + VS+
Sbjct: 1127 VTVTIAMIIVNMFGVMWLWGISLNAVSL 1154
Score = 40 (19.1 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 144 VTAFVALIEVHAPILGLWGVKMVVVSVFLAFTVASIALS 182
VTA + EV A ++ + M++V++F + I+L+
Sbjct: 1112 VTAVLLGFEVWAAVVVTVTIAMIIVNMFGVMWLWGISLN 1150
>UNIPROTKB|F1PB50 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071404 "cellular response to low-density
lipoprotein particle stimulus" evidence=IEA] [GO:0071383 "cellular
response to steroid hormone stimulus" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0033344 "cholesterol efflux" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0016242 "negative
regulation of macroautophagy" evidence=IEA] [GO:0015485
"cholesterol binding" evidence=IEA] [GO:0007628 "adult walking
behavior" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0008158 "hedgehog
receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
GO:GO:0005783 GO:GO:0005794 GO:GO:0005635 GO:GO:0048471
GO:GO:0005887 GO:GO:0042493 GO:GO:0005768 GO:GO:0006914
GO:GO:0006897 GO:GO:0005764 GO:GO:0045121 GO:GO:0033344
GO:GO:0031982 GO:GO:0007628 GO:GO:0008158 GO:GO:0071383
GO:GO:0016242 GO:GO:0071404 GeneTree:ENSGT00680000099777
OMA:DGYDLVQ TIGRFAMs:TIGR00917 EMBL:AAEX03005455
Ensembl:ENSCAFT00000028892 Uniprot:F1PB50
Length = 1277
Score = 312 (114.9 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 69/153 (45%), Positives = 95/153 (62%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S F V SK+ LG++G+++V+ SV+ S+G FS G+ TLI++EVI
Sbjct: 632 MFLYISIALGHIKSCSRFLVDSKISLGIAGILIVLSSVMCSLGIFSYFGIPLTLIVIEVI 691
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R LE ++ L EV PS+ L+S SE +AF +G+
Sbjct: 692 PFLVLAVGVDNIFILVQTYQRDERLQGETLEQQLGRVLGEVAPSMFLSSFSEAVAFFLGA 751
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 752 LSQMPAVHTFSLFAGMAVLIDFLLQITCFVSLL 784
Score = 301 (111.0 bits), Expect = 3.8e-55, Sum P(2) = 3.8e-55
Identities = 70/226 (30%), Positives = 120/226 (53%)
Query: 154 HAP-ILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYL 212
++P +L W ++ +V++VF+ SIA+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 826 YSPFLLKDW-MRPIVIAVFVGILSFSIAVLNKVEIGLDQSLSMPDDSYMMDYF-KSLKYL 883
Query: 213 RVGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASW 271
GPP+YFV+++ ++Y+S N +C C+++SL+ +I A+ + + I +SW
Sbjct: 884 HAGPPVYFVLEEGHDYTSLEGQ-NMVCGGMGCNNDSLVQQIFSAAQLDNYTRIGFAPSSW 942
Query: 272 LDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLV 331
+DD+ W P++ CCR + N T V+ C C +
Sbjct: 943 IDDYFDWVKPQS-SCCRVY-NSTDQFCNASV-----------VDPACVRCRPLTQEG--- 986
Query: 332 NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGI 377
RP E F LP FL+ P+ C KGGH AY ++V+L G ++ +
Sbjct: 987 KRRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYGSAVNLVGNDTSV 1032
Score = 154 (59.3 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 321 CTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQA 380
C C + RP E F LP FL+ P+ C KGGH AY ++V+L G ++ + A
Sbjct: 976 CVRCRPLTQEGKRRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYGSAVNLVGNDTSV-GA 1034
Query: 381 SEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLKV 416
+ F T+HT L D+ +++R A +S ++ T+ +
Sbjct: 1035 TYFMTYHTVLQTSADFTDAMRKAILIASNITKTMSL 1070
Score = 39 (18.8 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 144 VTAFVALIEVHAPILGLWGVKMVVVSV 170
VT + L+ + ++ LWG+ + VS+
Sbjct: 1128 VTIAMILVNMFG-VMWLWGISLNAVSL 1153
>UNIPROTKB|B0JYK2 [details] [associations]
symbol:NPC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071404 "cellular response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0033344 "cholesterol efflux" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] [GO:0016242 "negative regulation of
macroautophagy" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005794 GO:GO:0005635 GO:GO:0048471 GO:GO:0005887
GO:GO:0042493 GO:GO:0005768 GO:GO:0006914 GO:GO:0006897
GO:GO:0005764 GO:GO:0045121 GO:GO:0033344 GO:GO:0031982
GO:GO:0007628 GO:GO:0008158 GO:GO:0071383 GO:GO:0016242
GO:GO:0071404 eggNOG:NOG149152 GeneTree:ENSGT00680000099777
OMA:DGYDLVQ HOVERGEN:HBG003913 OrthoDB:EOG46DM1Z TIGRFAMs:TIGR00917
HOGENOM:HOG000036674 EMBL:DAAA02056610 EMBL:DAAA02056611
EMBL:BC151276 IPI:IPI00698823 UniGene:Bt.7157 STRING:B0JYK2
Ensembl:ENSBTAT00000020219 InParanoid:B0JYK2 Uniprot:B0JYK2
Length = 1277
Score = 308 (113.5 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 73/235 (31%), Positives = 120/235 (51%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP+L ++ +VV+VF+ SIA+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 825 YAPLLLKDWMRPLVVAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNQYLH 884
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
GPP+YFV+++ ++Y+S ++ N +C C+++SL+ ++ A+ + + I +SW+
Sbjct: 885 AGPPVYFVLEEGHDYTS-TKGQNMVCGGLGCNNDSLVQQVFTAAQLDSYTRIGFAPSSWI 943
Query: 273 DDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVN 332
DD+ W P++ CCR + N T VN C C
Sbjct: 944 DDYFDWVKPQS-SCCRIY-NSTEQFCNASV-----------VNPTCVRCRPLTPEG---K 987
Query: 333 NRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDL--NGYESGIIQASEFRT 385
RP F LP FL+ P+ C KGGH AYS +V++ NG G + T
Sbjct: 988 QRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYSAAVNILDNGTRVGATYFMTYHT 1042
Score = 297 (109.6 bits), Expect = 2.7e-54, Sum P(2) = 2.7e-54
Identities = 68/153 (44%), Positives = 92/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG V SK+ LG++GV++V+ SV S+G FS IGV TLI++EVI
Sbjct: 631 MFLYISIALGHIKSCRRLLVDSKISLGIAGVLIVLSSVACSLGIFSYIGVPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQP--MELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PS+ L+S +E +AF +G
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGG 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSVMPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 147 (56.8 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 323 TCFRHSDLV---NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDL--NGYESGI 377
TC R L RP F LP FL+ P+ C KGGH AYS +V++ NG G
Sbjct: 975 TCVRCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYSAAVNILDNGTRVG- 1033
Query: 378 IQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTL 414
A+ F T+HT L D+++++ AR +S ++ T+
Sbjct: 1034 --ATYFMTYHTVLQTSADFIDAMEKARLIASNITRTM 1068
Score = 40 (19.1 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 146 AFVALIEVHA-PILGLWGVKMVVVSV 170
A +A+I V+ ++ LWG+ + VS+
Sbjct: 1128 ATIAMILVNMFGVMWLWGISLNAVSL 1153
>CGD|CAL0003873 [details] [associations]
symbol:NCR1 species:5476 "Candida albicans" [GO:0000329
"fungal-type vacuole membrane" evidence=IEA] [GO:0046624
"sphingolipid transporter activity" evidence=IEA] [GO:0006665
"sphingolipid metabolic process" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 CGD:CAL0003873
GO:GO:0016021 GO:GO:0008158 EMBL:AACQ01000092 eggNOG:NOG149152
KO:K12385 RefSeq:XP_715042.1 ProteinModelPortal:Q59ZV0
GeneID:3643314 KEGG:cal:CaO19.7242 Uniprot:Q59ZV0
Length = 1256
Score = 313 (115.2 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 76/253 (30%), Positives = 130/253 (51%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP L K V+++F+ + S++L +I+ GL+Q+I +P SYL YF++ +YL
Sbjct: 797 YAPFLLKKTTKPKVITLFVLWVGISLSLFPKIQLGLDQRIAIPSKSYLVNYFNSVYDYLN 856
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCS-ISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
VGPP++FVVKD +YS S ++C S CD SL N + + ++S +++PA++WL
Sbjct: 857 VGPPVFFVVKDLDYSERSNQ-QKICGGFSACDEFSLANILEQEFKRSDISMLSEPASNWL 915
Query: 273 DDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCF-RHSDLV 331
DDF W +P+ CCR F T N + C +C+ H+
Sbjct: 916 DDFFSWLNPDLDQCCR-FKKSTVFEKTPEFCSP---------NAPQRQCQSCYLNHNPPY 965
Query: 332 NNRPSTEQFREKLPWFLNAL--PSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTP 389
++ R+ + +F + + PS C GG A+ ++ + I +S FRT P
Sbjct: 966 DSSMKAFPERDFMFYFNDWIQEPSDPCPLGGKAAHGQAISRTTEK---IDSSYFRTSFAP 1022
Query: 390 LNKQGDYVNSLRA 402
L Q +++N+ ++
Sbjct: 1023 LRGQDEFINAYKS 1035
Score = 282 (104.3 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 62/156 (39%), Positives = 94/156 (60%)
Query: 1 MFAYISVALGDTPRFSSFY--VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIME 58
MF Y S+ALG ++ Y V ++ LG S +I+++LSV SVGFFS IG++STLII E
Sbjct: 593 MFIYASLALGGKLPSANLYSLVKTRFTLGFSSIIIILLSVTASVGFFSIIGLRSTLIIAE 652
Query: 59 VIPFLVLAVGVDNMCILVN---AVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFA 115
VIPFLVLA+G+DN+ ++V+ + L LE RIS AL +GPS ++++ + F
Sbjct: 653 VIPFLVLAIGIDNIFLIVHELHVISEGNPNLALEVRISQALKHIGPSCFISAVLQVCMFL 712
Query: 116 VGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
+ + + MPA + F+ Q+T F+ L+
Sbjct: 713 LATSVGMPAVKNFAYYGAGAVLINFSLQMTCFIGLL 748
Score = 40 (19.1 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 252 ISRASSIPELSYIAKPAASWLDDFLVWTSPE 282
++RA +P++ PA L + LV PE
Sbjct: 1144 LTRAYCVPKVKMFDNPAEEELYNNLVNAEPE 1174
>FB|FBgn0261675 [details] [associations]
symbol:Npc1b "Niemann-Pick type C-1b" species:7227
"Drosophila melanogaster" [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007391 "dorsal closure"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] [GO:0030299 "intestinal
cholesterol absorption" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007391 EMBL:AE014298 GO:GO:0007422 GO:GO:0007417
GO:GO:0030299 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 KO:K12385 OrthoDB:EOG4JSXMB
OMA:SHVVKYF RefSeq:NP_608417.2 UniGene:Dm.26685
ProteinModelPortal:Q9VRC9 SMR:Q9VRC9 IntAct:Q9VRC9 MINT:MINT-759716
STRING:Q9VRC9 EnsemblMetazoa:FBtr0077239 GeneID:33072
KEGG:dme:Dmel_CG12092 UCSC:CG12092-RA CTD:33072 FlyBase:FBgn0261675
InParanoid:Q9VRC9 PhylomeDB:Q9VRC9 GenomeRNAi:33072 NextBio:781802
ArrayExpress:Q9VRC9 Bgee:Q9VRC9 Uniprot:Q9VRC9
Length = 1254
Score = 280 (103.6 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
Identities = 60/155 (38%), Positives = 92/155 (59%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF Y+++ALG F S+++L + G+++V+ SV+ S+GF+ + V +T++ +EVI
Sbjct: 603 MFVYVAIALGHIRSCRGFLRESRIMLAIGGIVIVLASVVCSLGFWGYLDVTTTMLAIEVI 662
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETR--ISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ I+V+ +R T I A+ +VGPSI + SE FA+G
Sbjct: 663 PFLVLAVGVDNIFIMVHTYQRLDHSKFKTTHEAIGEAIGQVGPSILQTAGSEMACFAIGC 722
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
MPA + F+M Q+TAFVAL+ +
Sbjct: 723 ISDMPAVKTFAMYAAIAILLDFLLQITAFVALMAI 757
Score = 226 (84.6 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
Identities = 46/136 (33%), Positives = 83/136 (61%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P L VK+ V+ +F T S+ ++ IE GL+Q++ +P++S++ YF + L
Sbjct: 805 YSPFLLSKPVKVSVLLIFTVITCLSLMVTPSIEKGLDQEMSMPKNSHVVKYFRYMVDLLA 864
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
+G P+Y+V+K NYS E N +C +C++NSL ++ + PE++ +A+PA+SWL
Sbjct: 865 MGAPVYWVLKPGLNYS-EPLQQNLICGGVECNNNSLSVQLYTQAQYPEITSLARPASSWL 923
Query: 273 DDFLVWTSPEAFGCCR 288
DD++ W + CC+
Sbjct: 924 DDYIDWLAIS--DCCK 937
Score = 129 (50.5 bits), Expect = 2.6e-52, Sum P(3) = 2.6e-52
Identities = 31/103 (30%), Positives = 48/103 (46%)
Query: 315 NGVCKDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYE 374
N +DC C R RP E F + +P+FL LP A+CAK G +Y+ +V +
Sbjct: 949 NSKSEDCLPCERGFTENGLRPDAETFNKYIPYFLFDLPDAECAKAGRASYADAVIYTIDD 1008
Query: 375 SGI--IQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLK 415
G+ +Q S F + T ++ + LR R S ++ K
Sbjct: 1009 VGMSTVQDSYFMQYSTTSTTSEEFYSQLREVRRISGEINAMFK 1051
>UNIPROTKB|Q8MKD8 [details] [associations]
symbol:Q8MKD8 "Niemann-Pick C1" species:9685 "Felis catus"
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 HOVERGEN:HBG003913
TIGRFAMs:TIGR00917 EMBL:AF503634 ProteinModelPortal:Q8MKD8
STRING:Q8MKD8 Uniprot:Q8MKD8
Length = 1276
Score = 302 (111.4 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 67/153 (43%), Positives = 94/153 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ SV S+G FS +G+ TLI++EVI
Sbjct: 631 MFLYISIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYVGIPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQPM--ELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PS+ L+S SE +AF +G+
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGA 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSKMPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 264 (98.0 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 210 EYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAA 269
+YL GPP+YFV+++ + + + N +C C+++SL+ +I A+ + + I +
Sbjct: 880 KYLHAGPPVYFVLEEGHDYTSLKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPS 939
Query: 270 SWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSD 329
SW+DD+ W P++ CCR + N T V+ C C +
Sbjct: 940 SWIDDYFDWVKPQS-SCCRVY-NSTDRFCNASV-----------VDPACIRCRPLTQEG- 985
Query: 330 LVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTP 389
RP F LP FL+ P+ C KGGH AYS++V++ G ++G+ A+ F T+HT
Sbjct: 986 --KQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTGV-GATYFMTYHTV 1042
Query: 390 LNKQGDYVNSLRAAREFSSRMSDTL 414
L D+ +++R A +S ++ T+
Sbjct: 1043 LQTSADFTDAMRKANLIASNITKTM 1067
Score = 237 (88.5 bits), Expect = 2.4e-47, Sum P(2) = 2.4e-47
Identities = 45/142 (31%), Positives = 88/142 (61%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V+++F+ S+A+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 825 YSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMDYF-KSLKYLH 883
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
GPP+YFV+++ ++Y+S + N +C C+++SL+ +I A+ + + I +SW+
Sbjct: 884 AGPPVYFVLEEGHDYTS-LKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWI 942
Query: 273 DDFLVWTSPEAFGCCRKFVNGT 294
DD+ W P++ CCR + N T
Sbjct: 943 DDYFDWVKPQS-SCCRVY-NST 962
Score = 38 (18.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 148 VALIEVHA-PILGLWGVKMVVVSV 170
+A+I V+ ++ LWG+ + VS+
Sbjct: 1129 IAMILVNMFGVMWLWGISLNAVSL 1152
>UNIPROTKB|Q9N0Q0 [details] [associations]
symbol:NPC1 "Niemann-Pick type C1 disease protein"
species:9685 "Felis catus" [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0007041
"lysosomal transport" evidence=ISS] [GO:0008206 "bile acid
metabolic process" evidence=ISS] [GO:0042632 "cholesterol
homeostasis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783
GO:GO:0005635 GO:GO:0048471 GO:GO:0005887 GO:GO:0008206
GO:GO:0042632 GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 CTD:4864
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF258783
RefSeq:NP_001009829.2 ProteinModelPortal:Q9N0Q0 STRING:Q9N0Q0
GeneID:493693 KEGG:fca:493693 Uniprot:Q9N0Q0
Length = 1276
Score = 296 (109.3 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 66/153 (43%), Positives = 93/153 (60%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ S S+G FS +G+ TLI++EVI
Sbjct: 631 MFLYISIALGHIKSCSRLLVDSKISLGIAGILIVLSSKACSLGIFSYVGIPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQPM--ELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PS+ L+S SE +AF +G+
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGA 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSKMPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 264 (98.0 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 60/205 (29%), Positives = 104/205 (50%)
Query: 210 EYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAA 269
+YL GPP+YFV+++ + + + N +C C+++SL+ +I A+ + + I +
Sbjct: 880 KYLHAGPPVYFVLEEGHDYTSLKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPS 939
Query: 270 SWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSD 329
SW+DD+ W P++ CCR + N T V+ C C +
Sbjct: 940 SWIDDYFDWVKPQS-SCCRVY-NSTDRFCNASV-----------VDPACIRCRPLTQEG- 985
Query: 330 LVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTP 389
RP F LP FL+ P+ C KGGH AYS++V++ G ++G+ A+ F T+HT
Sbjct: 986 --KQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTGV-GATYFMTYHTV 1042
Query: 390 LNKQGDYVNSLRAAREFSSRMSDTL 414
L D+ +++R A +S ++ T+
Sbjct: 1043 LQTSADFTDAMRKANLIASNITKTM 1067
Score = 237 (88.5 bits), Expect = 1.0e-46, Sum P(2) = 1.0e-46
Identities = 45/142 (31%), Positives = 88/142 (61%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V+++F+ S+A+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 825 YSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMDYF-KSLKYLH 883
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
GPP+YFV+++ ++Y+S + N +C C+++SL+ +I A+ + + I +SW+
Sbjct: 884 AGPPVYFVLEEGHDYTS-LKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWI 942
Query: 273 DDFLVWTSPEAFGCCRKFVNGT 294
DD+ W P++ CCR + N T
Sbjct: 943 DDYFDWVKPQS-SCCRVY-NST 962
Score = 38 (18.4 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 148 VALIEVHA-PILGLWGVKMVVVSV 170
+A+I V+ ++ LWG+ + VS+
Sbjct: 1129 IAMILVNMFGVMWLWGISLNAVSL 1152
>UNIPROTKB|Q8MI49 [details] [associations]
symbol:Q8MI49 "Mutant Niemann-Pick C1" species:9685 "Felis
catus" [GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0007041 "lysosomal transport"
evidence=ISS] [GO:0008206 "bile acid metabolic process"
evidence=ISS] [GO:0042632 "cholesterol homeostasis" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004765
Pfam:PF02460 PROSITE:PS50156 GO:GO:0005783 GO:GO:0005635
GO:GO:0048471 GO:GO:0005887 GO:GO:0008206 GO:GO:0042632
GO:GO:0007041 GO:GO:0030301 GO:GO:0008158 eggNOG:NOG149152
HOVERGEN:HBG003913 TIGRFAMs:TIGR00917 EMBL:AF503633
ProteinModelPortal:Q8MI49 STRING:Q8MI49 Uniprot:Q8MI49
Length = 1276
Score = 302 (111.4 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 67/153 (43%), Positives = 94/153 (61%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
MF YIS+ALG S V SK+ LG++G+++V+ SV S+G FS +G+ TLI++EVI
Sbjct: 631 MFLYISIALGHIKSCSRLLVDSKISLGIAGILIVLSSVACSLGIFSYVGIPLTLIVIEVI 690
Query: 61 PFLVLAVGVDNMCILVNAVKRQPM--ELVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
PFLVLAVGVDN+ ILV +R L+ ++ L EV PS+ L+S SE +AF +G+
Sbjct: 691 PFLVLAVGVDNIFILVQTYQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGA 750
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
MPA FS+ Q+T FV+L+
Sbjct: 751 LSKMPAVHTFSLFAGMAVLIDFLLQITCFVSLL 783
Score = 254 (94.5 bits), Expect = 3.9e-49, Sum P(2) = 3.9e-49
Identities = 58/205 (28%), Positives = 102/205 (49%)
Query: 210 EYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAA 269
+YL GPP+YFV+++ + + + N +C C+++SL+ +I A+ + + I +
Sbjct: 880 KYLHAGPPVYFVLEEGHDYTSLKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPS 939
Query: 270 SWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSD 329
SW+DD+ W P++ C + N T V+ C C +
Sbjct: 940 SWIDDYFDWVKPQSSSC--RVYNSTDRFCNASV-----------VDPACIRCRPLTQEG- 985
Query: 330 LVNNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTP 389
RP F LP FL+ P+ C KGGH AYS++V++ G ++G+ A+ F T+HT
Sbjct: 986 --KQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNDTGV-GATYFMTYHTV 1042
Query: 390 LNKQGDYVNSLRAAREFSSRMSDTL 414
L D+ +++R A +S ++ T+
Sbjct: 1043 LQTSADFTDAMRKANLIASNITKTM 1067
Score = 227 (85.0 bits), Expect = 2.7e-46, Sum P(2) = 2.7e-46
Identities = 41/134 (30%), Positives = 83/134 (61%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
++P+L ++ +V+++F+ S+A+ ++E GL+Q + +P DSY+ YF + +YL
Sbjct: 825 YSPLLLKDWMRPIVIAIFVGVLSFSVAVLNKVEIGLDQSLSMPDDSYVMDYF-KSLKYLH 883
Query: 214 VGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
GPP+YFV+++ ++Y+S + N +C C+++SL+ +I A+ + + I +SW+
Sbjct: 884 AGPPVYFVLEEGHDYTS-LKGQNMVCGGMGCNNDSLVQQIFNAAQLDSYTRIGFAPSSWI 942
Query: 273 DDFLVWTSPEAFGC 286
DD+ W P++ C
Sbjct: 943 DDYFDWVKPQSSSC 956
Score = 38 (18.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 148 VALIEVHA-PILGLWGVKMVVVSV 170
+A+I V+ ++ LWG+ + VS+
Sbjct: 1129 IAMILVNMFGVMWLWGISLNAVSL 1152
>DICTYBASE|DDB_G0276657 [details] [associations]
symbol:npcB "Niemann-Pick C type protein"
species:44689 "Dictyostelium discoideum" [GO:0030301 "cholesterol
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004765 Pfam:PF02460 PROSITE:PS50156
dictyBase:DDB_G0276657 GO:GO:0016021 GO:GO:0030301 GO:GO:0008158
EMBL:AAFI02000018 eggNOG:NOG149152 TIGRFAMs:TIGR00917
RefSeq:XP_643013.1 ProteinModelPortal:Q551C5
EnsemblProtists:DDB0202935 GeneID:8620617 KEGG:ddi:DDB_G0276657
InParanoid:Q551C5 OMA:LTIWRET ProtClustDB:CLSZ2430881
Uniprot:Q551C5
Length = 1397
Score = 279 (103.3 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 59/143 (41%), Positives = 89/143 (62%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP L K++++ F+A + SI + +I GL+Q++ LPR+SYLQ YF N ++L
Sbjct: 977 YAPFLVHPISKLLIIIFFIAMLLFSINYAYQIPIGLDQKVALPRNSYLQAYFTNMNQFLE 1036
Query: 214 VGPPLYFVVK-DYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWL 272
VGPP+Y VVK +Y++S S NQ C++ C++NS++N A P +I+ +SWL
Sbjct: 1037 VGPPMYIVVKGNYDFSIPSIQ-NQFCTVGGCNNNSVINTFDNA---P---FISPGISSWL 1089
Query: 273 DDFLVWTSPEAFGCCRKFVNGTY 295
DD L W++ GCC F NGTY
Sbjct: 1090 DDMLQWSN--TVGCCTAFDNGTY 1110
Score = 210 (79.0 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 46/81 (56%), Positives = 61/81 (75%)
Query: 1 MFAYISVALGDT---P-RFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLII 56
MF YIS++LG P RF+SF++ S+ LGLSG+ +V S++ SVG S + +K+TLII
Sbjct: 672 MFLYISLSLGSYYPFPRRFNSFFIRSRFALGLSGICIVACSIIISVGICSILRIKATLII 731
Query: 57 MEVIPFLVLAVGVDNMCILVN 77
EVIPFLVLA+GVDN+ ILVN
Sbjct: 732 SEVIPFLVLAIGVDNIFILVN 752
Score = 125 (49.1 bits), Expect = 8.3e-39, Sum P(3) = 8.3e-39
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 24 VLLGLSGVILVMLSVLGS--VGFFS-AIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVK 80
+ +G+ ++ + +++ S + F AIGV + I++ L +A + I
Sbjct: 715 ISVGICSILRIKATLIISEVIPFLVLAIGVDNIFILVNTFESLHVASSSSSSSISGFNQN 774
Query: 81 RQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXX 140
M E+ + L +VGPSI LASLSE AF +GS MPA + FS
Sbjct: 775 HHQMPTPEES-FARTLAKVGPSIALASLSESFAFLLGSLTKMPAVKAFSFYASIAVFFDF 833
Query: 141 XXQVTAFVALI 151
Q++AF L+
Sbjct: 834 LLQISAFACLL 844
Score = 105 (42.0 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 332 NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLN 391
+ RP F++ LP FLN + C G AY+ V N G I A+ F +HT L
Sbjct: 1128 SGRPDPSLFKKYLPAFLNFTNTDQCPLAGL-AYTGDVKFNS--DGSIAATRFDAYHTTLR 1184
Query: 392 KQGDYVNSL 400
Q D++N+L
Sbjct: 1185 TQNDFINAL 1193
>SGD|S000005927 [details] [associations]
symbol:NCR1 "Vacuolar membrane protein" species:4932
"Saccharomyces cerevisiae" [GO:0006665 "sphingolipid metabolic
process" evidence=IEA;IMP] [GO:0016021 "integral to membrane"
evidence=ISM;IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0006869 "lipid transport" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0046624 "sphingolipid transporter activity"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 SGD:S000005927 GO:GO:0016021 GO:GO:0000329
EMBL:Z71255 EMBL:BK006949 EMBL:Z48483 EMBL:U33335 GO:GO:0006665
GO:GO:0008158 GO:GO:0046624 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 KO:K12385 OMA:DGYDLVQ
HOGENOM:HOG000036674 PIR:S52525 RefSeq:NP_015319.1
ProteinModelPortal:Q12200 SMR:Q12200 IntAct:Q12200
MINT:MINT-1552235 STRING:Q12200 TCDB:2.A.6.6.3 PaxDb:Q12200
PeptideAtlas:Q12200 EnsemblFungi:YPL006W GeneID:856101
KEGG:sce:YPL006W CYGD:YPL006w OrthoDB:EOG48D43G NextBio:981149
Genevestigator:Q12200 GermOnline:YPL006W Uniprot:Q12200
Length = 1170
Score = 236 (88.1 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 46/136 (33%), Positives = 87/136 (63%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
+++LLG+SG+++V+ S++ + GF + G+KSTLII EVIPFL+LA+G+DN+ ++ + R
Sbjct: 583 TRLLLGISGLLIVLASIVCAAGFLTLFGLKSTLIIAEVIPFLILAIGIDNIFLITHEYDR 642
Query: 82 ---QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXX 138
Q E ++ +I +A+ + PSI ++ L + F + +F+ MPA F++
Sbjct: 643 NCEQKPEYSIDQKIISAIGRMSPSILMSLLCQTGCFLIAAFVTMPAVHNFAIYSTVSVIF 702
Query: 139 XXXXQVTAFVALIEVH 154
Q+TA+V+++ ++
Sbjct: 703 NGVLQLTAYVSILSLY 718
Score = 212 (79.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 41/126 (32%), Positives = 74/126 (58%)
Query: 164 KMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVK 223
K +++ +F A+ S+ I+ GL+Q + +P+DSYL YF + +L VGPP+Y VVK
Sbjct: 749 KRLIIIIFSAWFFTSLVFLPEIQFGLDQTLAVPQDSYLVDYFKDVYSFLNVGPPVYMVVK 808
Query: 224 DYNYSSESRHTNQLCS-ISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPE 282
+ + + ++ ++C + C+ +SL N + + S I +P A+WLDD+ ++ +P+
Sbjct: 809 NLDLTKR-QNQQKICGKFTTCERDSLANVLEQER---HRSTITEPLANWLDDYFMFLNPQ 864
Query: 283 AFGCCR 288
CCR
Sbjct: 865 NDQCCR 870
Score = 146 (56.5 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 47/150 (31%), Positives = 66/150 (44%)
Query: 262 SYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDC 321
S I +P A+WLDD+ ++ +P+ CCR GT + C
Sbjct: 844 STITEPLANWLDDYFMFLNPQNDQCCR-LKKGTDEVCPPSFPS--------------RRC 888
Query: 322 TTCFRHSDLVNNR---PSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGII 378
TCF+ N P + F E L ++NA PS C GG YST++ N E+ +
Sbjct: 889 ETCFQQGSWNYNMSGFPEGKDFMEYLSIWINA-PSDPCPLGGRAPYSTALVYN--ETSV- 944
Query: 379 QASEFRTFHTPLNKQGDYVNSLRAAREFSS 408
AS FRT H PL Q D++ + SS
Sbjct: 945 SASVFRTAHHPLRSQKDFIQAYSDGVRISS 974
>WB|WBGene00003561 [details] [associations]
symbol:ncr-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0046662 "regulation of oviposition" evidence=IMP]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0005770
"late endosome" evidence=ISS] [GO:0005764 "lysosome" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030301
"cholesterol transport" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040010 EMBL:FO081068 GO:GO:0005764
GO:GO:0042632 GO:GO:0005770 GO:GO:0046662 GO:GO:0040024
GO:GO:0030301 GO:GO:0008158 PIR:T15961 RefSeq:NP_508771.1
ProteinModelPortal:Q19127 SMR:Q19127 STRING:Q19127 PaxDb:Q19127
EnsemblMetazoa:F02E8.6 GeneID:180719 KEGG:cel:CELE_F02E8.6
UCSC:F02E8.6 CTD:180719 WormBase:F02E8.6 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 HOGENOM:HOG000020287 InParanoid:Q19127
KO:K12385 OMA:DGYDLVQ NextBio:910614 Uniprot:Q19127
Length = 1383
Score = 260 (96.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 65/265 (24%), Positives = 119/265 (44%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP L +++ +F+A + ++ LS++I G +Q + SY+ +F ++ V
Sbjct: 846 APFLMHRMTRIITGIIFIASFITTVILSSKISVGFDQSMAFTEKSYISTHFRYLDKFFDV 905
Query: 215 GPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDD 274
GPP++F V N+ C+ C S N ++ A E +Y++ +W+D+
Sbjct: 906 GPPVFFTVDGELDWHRPDVQNKFCTFPGCSDTSFGNIMNYAVGHTEQTYLSGEMYNWIDN 965
Query: 275 FLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKD---CTTCFRHSDLV 331
+L W S ++ CC+ +V+ C D + S ++
Sbjct: 966 YLEWISRKS-PCCKVYVHDPNTFCSTNRNKSALDDKACRT---CMDFDYVANSYPKSSIM 1021
Query: 332 NNRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLN 391
+RPS E F L FL P+++C GG ++ ++ G IQAS+F TFH L+
Sbjct: 1022 YHRPSIEVFYRHLRHFLEDTPNSECVFGGRASFKDAISFTS--RGRIQASQFMTFHKKLS 1079
Query: 392 --KQGDYVNSLRAAREFSSRMSDTL 414
D++ ++ AR S R+ ++
Sbjct: 1080 ISNSSDFIKAMDTARMVSRRLERSI 1104
Score = 110 (43.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 1 MFAYISVALGD----TPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLII 56
+ Y++ +LG + S V S++ LG+ VI+ +LS S G FS G+
Sbjct: 638 LIGYVTFSLGRYFVCENQLWSILVHSRICLGMLSVIINLLSSFCSWGIFSMFGIHPVKNA 697
Query: 57 MEVIPFLVLAVGVDNMCILVN--AVKRQPMELVLETRISN--ALVEVG--PSITLASLSE 110
+ V F+V +GV ++V A +R M + + +V G P++ +SL
Sbjct: 698 LVVQFFVVTLLGVCRTFMVVKYYAQQRVSMPYMSPDQCPEIVGMVMAGTMPAMFSSSLGC 757
Query: 111 FLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVAL 150
+F +G F +PA R F + T F+AL
Sbjct: 758 AFSFFIGGFTDLPAIRTFCLYAGLAVLIDVVLHCTIFLAL 797
>UNIPROTKB|J9PBB6 [details] [associations]
symbol:J9PBB6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0008158
"hedgehog receptor activity" evidence=IEA] InterPro:IPR003392
Pfam:PF02460 GO:GO:0016020 GO:GO:0008158
GeneTree:ENSGT00680000099777 Ensembl:ENSCAFT00000048348 OMA:WMYLQEI
Uniprot:J9PBB6
Length = 339
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 68/183 (37%), Positives = 96/183 (52%)
Query: 235 NQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGT 294
N +CS + CDS SL +I A+ PE SY+A PA+SW+DDF+ W +P + CCR + G
Sbjct: 2 NAVCSSAGCDSYSLTQKIQYATEFPEESYLAIPASSWVDDFIDWLTPSS--CCRLYAFGA 59
Query: 295 YXXXXXXXXXXXXXXXXXGVNGV-C-KDCTTCFRHSDLVNNRPSTEQFREKLPWFLNALP 352
VN + C K+C F + RPS +QF + LPWFL+ P
Sbjct: 60 NKDKFCPST----------VNSLACLKNCVN-FTLGPV---RPSVDQFHKYLPWFLSDPP 105
Query: 353 SADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSD 412
+ C KGG AY+TSV L G + AS F +H PL DY +LR +R ++ ++
Sbjct: 106 NIKCPKGGLAAYNTSVHLGS--DGQVLASRFMAYHKPLRNSEDYTEALRVSRALAANITA 163
Query: 413 TLK 415
L+
Sbjct: 164 QLR 166
>WB|WBGene00003562 [details] [associations]
symbol:ncr-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040025 "vulval development" evidence=IGI]
[GO:0040024 "dauer larval development" evidence=IGI] [GO:0042632
"cholesterol homeostasis" evidence=IGI] [GO:0030301 "cholesterol
transport" evidence=IGI] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0042632
GO:GO:0040024 GO:GO:0040025 GO:GO:0030301 GO:GO:0008158
EMBL:FO080289 GeneTree:ENSGT00680000099777 PIR:S44797
RefSeq:NP_498813.1 ProteinModelPortal:P34389 SMR:P34389
EnsemblMetazoa:F09G8.4 GeneID:176165 KEGG:cel:CELE_F09G8.4
UCSC:F09G8.4 CTD:176165 WormBase:F09G8.4 eggNOG:NOG254241
HOGENOM:HOG000113842 InParanoid:P34389 OMA:DQCCRFK NextBio:891402
Uniprot:P34389
Length = 1274
Score = 161 (61.7 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 40/138 (28%), Positives = 70/138 (50%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP+L ++ + + F + + + +E G Q + SYL +F N E L +
Sbjct: 814 APLLLKKICRIWIATFFFVSLIIACYCTLCLEFGFNQVMAFSETSYLTKHFQNMNENLNI 873
Query: 215 GPPLYFVVK-DYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPEL---SYIAKPAAS 270
GPPL+FVV+ D + + + N+ C+++ CD NS+ N+I R+ + E +Y+
Sbjct: 874 GPPLWFVVEGDVKWH-DPKMQNKFCTLAGCDDNSMGNKI-RSLAYAENYKGNYLHGDVNI 931
Query: 271 WLDDFLVWTSPEAFGCCR 288
WLD +L + P CC+
Sbjct: 932 WLDSYLQFMHPRG-SCCK 948
Score = 97 (39.2 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 17 SFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 76
S V K+L+ +S V++ ++SV S+G FS GV +T + V+ F++ +G++ + +++
Sbjct: 617 SALVHHKLLISISAVMISVISVWCSIGMFSLFGVHATDNAIVVLFFVITCLGINRIFVII 676
Query: 77 NAVKRQ------PMELVLET--RISNALVEVGPSITLASL-SEFLAFAVGSFIP-----M 122
+ P E RISN + P + SL F G +P M
Sbjct: 677 RTFQANGHCYGLPNISYREMNHRISNVMRRSIPIVLTNSLICSTCLFLAGGVLPYVSVSM 736
Query: 123 PACRVFS 129
PA VF+
Sbjct: 737 PAVEVFA 743
Score = 91 (37.1 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 321 CTTCFRHSDLVNNRPSTE-QFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQ 379
C++C S V + +TE +F L FL PS CA GG +++L +G IQ
Sbjct: 963 CSSC--SSSSVASLTTTEYEFYRNLHHFLETPPSIQCAHGGMALAKPAINLT--RNGKIQ 1018
Query: 380 ASEFRTFHTPLNKQGDYVNSLRAAREFSSRMSDTLK 415
++ F TF LN D + A R F+ ++D ++
Sbjct: 1019 SAYFSTFFKKLNLS-DSIQLYDAWR-FAKYLADDIE 1052
Score = 40 (19.1 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 29 SGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIP 61
+G+ L ++S+ G V F + G T + + IP
Sbjct: 171 NGLALRLMSLGGKVSFENFYGFMGTKNLAQSIP 203
>ZFIN|ZDB-GENE-041210-239 [details] [associations]
symbol:si:ch211-250m6.7 "si:ch211-250m6.7"
species:7955 "Danio rerio" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-041210-239 GO:GO:0016021 GO:GO:0008158
HOGENOM:HOG000115764 HOVERGEN:HBG082604 EMBL:BX005238
IPI:IPI00489183 ProteinModelPortal:Q5RJ13 InParanoid:Q5RJ13
Uniprot:Q5RJ13
Length = 827
Score = 170 (64.9 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 40/135 (29%), Positives = 72/135 (53%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V +KV + L GV+ ++VL S G G+ + + PFL+L VGVD+M I++++
Sbjct: 278 VRTKVWVALLGVVSAGMAVLASFGLLLFCGMPFAMTVGSA-PFLILGVGVDDMFIMISSW 336
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
++ ++ +E R++ A E G SIT+ +L++ LAF +G P + + F M
Sbjct: 337 QKTAVDKGVEFRLAEAYKEAGVSITITTLTDVLAFYIGLLTPFRSVQSFCMYTSTALLFC 396
Query: 140 XXXQVTAFVALIEVH 154
+T F A + ++
Sbjct: 397 YLFNITFFGACLALN 411
Score = 99 (39.9 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 32/125 (25%), Positives = 59/125 (47%)
Query: 154 HAPILG-LWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYL 212
+ P L +W VK++V ++ + SI ++E GL+ + + SY+ Y+D E+
Sbjct: 463 YGPFLAKVW-VKVLVCLIYAGYLAVSIYGCFQMEEGLDLKHLATDGSYVADYYDREDEFF 521
Query: 213 RV-GPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASW 271
GP + V+KD ++ S + S+ C N +++ S E+ P SW
Sbjct: 522 SAFGPNVMLVIKDEHFQYWSPDARK--SLDLCLKN--FRDLTMVDS--EI-----PLTSW 570
Query: 272 LDDFL 276
LD ++
Sbjct: 571 LDAYM 575
>UNIPROTKB|H9L1J3 [details] [associations]
symbol:H9L1J3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00680000099777 EMBL:AADN02079001
Ensembl:ENSGALT00000035551 OMA:NISMETR Uniprot:H9L1J3
Length = 199
Score = 195 (73.7 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 39/109 (35%), Positives = 62/109 (56%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S +G+ +V+PFL L +GVD+M +L +A
Sbjct: 19 SQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTE 78
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSM 130
+ + R L G S+ L S+S +AF + + +P+PA R FS+
Sbjct: 79 TSQHIPFKERTGECLRRTGTSVALTSVSNMIAFFMAALVPIPALRAFSL 127
>WB|WBGene00004217 [details] [associations]
symbol:ptr-2 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR001036 InterPro:IPR003392
Pfam:PF02460 PRINTS:PR00702 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0048477
GO:GO:0005215 GO:GO:0000910 GO:GO:0045138 GO:GO:0008158
GO:GO:0001703 eggNOG:NOG149152 EMBL:FO080749
GeneTree:ENSGT00680000099845 OMA:HERMGEC PIR:T25600
RefSeq:NP_491221.1 ProteinModelPortal:P91129 SMR:P91129
DIP:DIP-27136N MINT:MINT-1099898 STRING:P91129 PaxDb:P91129
EnsemblMetazoa:C32E8.8 GeneID:171950 KEGG:cel:CELE_C32E8.8
UCSC:C32E8.8 CTD:171950 WormBase:C32E8.8 HOGENOM:HOG000020462
InParanoid:P91129 NextBio:873377 Uniprot:P91129
Length = 933
Score = 208 (78.3 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 48/137 (35%), Positives = 76/137 (55%)
Query: 15 FSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCI 74
FS +V SK +L + GV+ +++L VGF S +G+ I+ V+PFLVLAVGVDNM +
Sbjct: 291 FSIDWVLSKPILSILGVVSAGIAILTGVGFLSLMGMPYNDIV-GVMPFLVLAVGVDNMFL 349
Query: 75 LVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXX 134
+V AV+R + R+ L + SI + S ++ L+F VG+ +PA ++F +
Sbjct: 350 MVAAVRRTSRTHTVHERMGECLADAAVSILITSSTDVLSFGVGAITTIPAVQIFCVYTGV 409
Query: 135 XXXXXXXXQVTAFVALI 151
Q+T F A +
Sbjct: 410 AIFFAFIYQITFFAACL 426
Score = 57 (25.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
E +AP+L V+ + + F+ + + + +RI+ GLE +L DSY ++ +Y
Sbjct: 486 EWYAPVLMHPVVRGIAMVWFVIYLLGASYGCSRIKEGLEPVNLLVEDSYAIPHYRLLEKY 545
Query: 212 L-RVGPPLYFVVKDYNYSSESRHTNQ 236
+ G + V+ N HT++
Sbjct: 546 FWKYGQQVQIVIN--NAPDLRNHTSR 569
>ZFIN|ZDB-GENE-980526-196 [details] [associations]
symbol:ptch1 "patched 1" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IMP] [GO:0001957 "intramembranous
ossification" evidence=IMP] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-196 GO:GO:0016021 GO:GO:0010002 GO:GO:0001649
GO:GO:0001957 GO:GO:0008158 GO:GO:0045879 GO:GO:0048635
GO:GO:0060042 GeneTree:ENSGT00680000099777 KO:K06225 CTD:5727
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:CR847548 EMBL:CR376747
EMBL:CR382329 EMBL:CT027671 IPI:IPI00994727 RefSeq:XP_001922161.3
UniGene:Dr.116176 UniGene:Dr.81263 Ensembl:ENSDART00000121923
GeneID:30189 KEGG:dre:30189 NextBio:20806655 ArrayExpress:F1QRE4
Bgee:F1QRE4 Uniprot:F1QRE4
Length = 1475
Score = 190 (71.9 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S +G+ +V+PFL L VGVD++ +L +A
Sbjct: 454 SQGAVGLAGVLLVTLSVAAGLGLCSLLGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 513
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 514 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 573
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 574 FAMVLLIFPAILSM 587
Score = 78 (32.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 147 FVALIEVH-APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
F + E H AP L K+VV+ +FLA S+ +TR+ GLE ++PR++
Sbjct: 751 FASFAEKHYAPFLLQSTTKVVVIFLFLALLGVSLYGTTRVRDGLELTDIVPRET 804
Score = 38 (18.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 157 ILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
++GL G+K+ V V + I + + L
Sbjct: 1084 MMGLIGIKLSAVPVVILIASVGIGVEFTVHVAL 1116
>ZFIN|ZDB-GENE-980526-44 [details] [associations]
symbol:ptch2 "patched 2" species:7955 "Danio rerio"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0048635 "negative regulation of muscle organ
development" evidence=IGI] [GO:0010002 "cardioblast
differentiation" evidence=IGI] [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IMP] [GO:0009954 "proximal/distal pattern
formation" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
ZFIN:ZDB-GENE-980526-44 GO:GO:0016021 GO:GO:0010002 GO:GO:0043010
GO:GO:0001649 GO:GO:0009954 GO:GO:0007224 GO:GO:0008158
GO:GO:0031290 GO:GO:0048635 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 EMBL:BX649493 IPI:IPI00500992
Ensembl:ENSDART00000077304 ArrayExpress:F1Q8S0 Bgee:F1Q8S0
Uniprot:F1Q8S0
Length = 1442
Score = 188 (71.2 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 39/132 (29%), Positives = 69/132 (52%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S +G+ +V+PFL L +GVD+M +L ++
Sbjct: 448 SQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAATTQVLPFLALGIGVDDMFLLAHSFTE 507
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
+ + R + L G S+ L S++ +AF + + +P+PA R FS+
Sbjct: 508 TRSNIPFKERTGDCLRRTGTSVALTSINNMIAFFMAALVPIPALRAFSLQAAVVVVFNFA 567
Query: 142 XQVTAFVALIEV 153
+ F A++ +
Sbjct: 568 MVLLIFPAILSL 579
Score = 78 (32.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
E +AP+L K VVV VF+A S+ +T + GL ++PRD+ + +Y
Sbjct: 727 EKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTQEYEFITAQFKY 786
Query: 212 LRVGPPLYFVVKD-YNYSSESRHTNQL 237
+Y V D ++Y+ R QL
Sbjct: 787 FSFYN-MYLVTMDGFDYARSQRQLLQL 812
Score = 40 (19.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 144 VTAFV-ALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
V F+ A++ V I+GL G+K+ + V + I + + L
Sbjct: 1044 VIVFILAMMTVELFGIMGLIGIKLSAIPVVILIASVGIGVEFTVHIAL 1091
>UNIPROTKB|F1NYG9 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] [GO:0008544 "epidermis
development" evidence=IEA] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA] [GO:0010157 "response to chlorate"
evidence=IEA] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA] [GO:0015485 "cholesterol binding"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0021997 "neural plate axis specification" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0035137 "hindlimb morphogenesis" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043616
"keratinocyte proliferation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0061053 "somite
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IEA] [GO:0072661 "protein
targeting to plasma membrane" evidence=IEA] [GO:0097108 "hedgehog
family protein binding" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0007346 GO:GO:0005794 GO:GO:0048471
GO:GO:0043616 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0030496 GO:GO:0016485
GO:GO:0050680 GO:GO:0072661 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0045879 GO:GO:0010157
GeneTree:ENSGT00680000099777 IPI:IPI00593923 TIGRFAMs:TIGR00918
OMA:APDRDYL EMBL:AADN02067838 EMBL:AADN02067839 EMBL:AADN02067840
EMBL:AADN02067841 EMBL:AADN02067842 EMBL:AADN02067843
Ensembl:ENSGALT00000020601 Uniprot:F1NYG9
Length = 1303
Score = 192 (72.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 334 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 393
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 394 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 453
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 454 FAMVLLIFPAILSM 467
Score = 67 (28.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
+AP L K+VV+ +FL S+ +TR+ GL+ ++PRD+
Sbjct: 608 YAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRDT 653
Score = 40 (19.1 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 916 IVVVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHIAL 962
>UNIPROTKB|Q90693 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9031
"Gallus gallus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0005887
GO:GO:0007224 GO:GO:0008158 eggNOG:NOG313603 KO:K06225 EMBL:U40074
IPI:IPI00593923 PIR:T18538 RefSeq:NP_990291.1 UniGene:Gga.474
ProteinModelPortal:Q90693 STRING:Q90693 GeneID:395806
KEGG:gga:395806 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
InParanoid:Q90693 OrthoDB:EOG40S0DT NextBio:20815874
TIGRFAMs:TIGR00918 Uniprot:Q90693
Length = 1442
Score = 192 (72.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 465 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 524
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 525 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 584
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 585 FAMVLLIFPAILSM 598
Score = 67 (28.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
+AP L K+VV+ +FL S+ +TR+ GL+ ++PRD+
Sbjct: 739 YAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRDT 784
Score = 40 (19.1 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 1055 IVVVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHIAL 1101
>UNIPROTKB|F1PNE0 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:AAEX03000490 Ensembl:ENSCAFT00000001978 Uniprot:F1PNE0
Length = 1449
Score = 192 (72.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 463 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 522
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 523 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 582
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 583 FAMVLLIFPAILSM 596
Score = 66 (28.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 33/144 (22%), Positives = 61/144 (42%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR 213
+AP L K+VV+ +FL S+ +TR+ GL+ ++PR++ + +Y
Sbjct: 738 YAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFS 797
Query: 214 VGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPE--LSYIAKPAASW 271
+Y V + +Y + +H L + + SN + +P+ L Y
Sbjct: 798 FYN-MYIVTQKADYPN-IQHL--LYDLHKSFSNVKYVMLEENKQLPKMWLHYFRDWLQGL 853
Query: 272 LDDF-LVWTSPEAFGCCRKFVNGT 294
D F W + ++ C KF G+
Sbjct: 854 QDAFDSDWETGKS---CNKFKKGS 874
Score = 41 (19.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 1053 IVTVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVAL 1099
>MGI|MGI:105373 [details] [associations]
symbol:Ptch1 "patched homolog 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:0001841
"neural tube formation" evidence=IDA] [GO:0001843 "neural tube
closure" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0005113 "patched binding" evidence=IDA]
[GO:0005119 "smoothened binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=ISO;IDA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0005901
"caveola" evidence=ISO] [GO:0007165 "signal transduction"
evidence=IDA;TAS] [GO:0007224 "smoothened signaling pathway"
evidence=IGI;IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008158 "hedgehog receptor activity" evidence=TAS] [GO:0008201
"heparin binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0008544 "epidermis development"
evidence=IMP] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IGI;IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI] [GO:0010157 "response to chlorate" evidence=IDA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0015485 "cholesterol binding" evidence=ISO;TAS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016485 "protein processing" evidence=IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0021532 "neural tube patterning" evidence=ISO]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IMP]
[GO:0021997 "neural plate axis specification" evidence=IMP]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI;IMP]
[GO:0030332 "cyclin binding" evidence=ISO;IPI] [GO:0030496
"midbody" evidence=IDA] [GO:0030879 "mammary gland development"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IDA;IMP]
[GO:0035108 "limb morphogenesis" evidence=ISO] [GO:0035137
"hindlimb morphogenesis" evidence=IMP] [GO:0040008 "regulation of
growth" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=IMP] [GO:0044294 "dendritic growth cone" evidence=ISO]
[GO:0044295 "axonal growth cone" evidence=ISO] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;NAS;IMP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051782 "negative regulation of
cell division" evidence=IMP] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IMP] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IMP] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=IMP] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IGI] [GO:0061053 "somite
development" evidence=ISO;IMP] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072203 "cell proliferation involved
in metanephros development" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0072661 "protein targeting to plasma
membrane" evidence=ISO] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:105373
GO:GO:0007346 GO:GO:0005794 GO:GO:0048471 GO:GO:0005576
GO:GO:0043616 GO:GO:0007420 GO:GO:0005887 GO:GO:0032403
GO:GO:0003007 GO:GO:0008270 GO:GO:0008201 GO:GO:0071397
GO:GO:0032880 GO:GO:0042593 Reactome:REACT_115202 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0030326 GO:GO:0060037
GO:GO:0072372 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0045668 GO:GO:0008158 GO:GO:0051782
GO:GO:0021997 GO:GO:0045879 GO:GO:0060603 GO:GO:0060831
GO:GO:0061005 GO:GO:0072203 GO:GO:0005113 GO:GO:0061053
GO:GO:0010157 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
KO:K06225 CTD:5727 HOGENOM:HOG000231331 HOVERGEN:HBG003801
OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:U46155
IPI:IPI00117758 PIR:T30172 RefSeq:NP_032983.1 UniGene:Mm.228798
UniGene:Mm.488634 ProteinModelPortal:Q61115 STRING:Q61115
PhosphoSite:Q61115 PRIDE:Q61115 Ensembl:ENSMUST00000021921
GeneID:19206 KEGG:mmu:19206 UCSC:uc007qxv.1 InParanoid:Q61115
NextBio:295938 Bgee:Q61115 CleanEx:MM_PTCH1 Genevestigator:Q61115
GermOnline:ENSMUSG00000021466 Uniprot:Q61115
Length = 1434
Score = 192 (72.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 451 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 510
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 511 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 570
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 571 FAMVLLIFPAILSM 584
Score = 64 (27.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
+AP L K+VV+ +FL S+ +TR+ GL+ ++PR++
Sbjct: 726 YAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 771
Score = 40 (19.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 1042 IVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVAL 1088
>UNIPROTKB|Q6UY90 [details] [associations]
symbol:Ptch1 "Protein Ptch1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0005113 "patched binding"
evidence=IEA] [GO:0005119 "smoothened binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=ISS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0015485 "cholesterol binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016485
"protein processing" evidence=ISS] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA] [GO:0021997 "neural plate
axis specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032880 "regulation of
protein localization" evidence=IEA] [GO:0035137 "hindlimb
morphogenesis" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=ISS] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051782 "negative
regulation of cell division" evidence=IEA] [GO:0060037 "pharyngeal
system development" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0061005 "cell
differentiation involved in kidney development" evidence=IEA]
[GO:0061053 "somite development" evidence=IEA] [GO:0071397
"cellular response to cholesterol" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0097108 "hedgehog family protein binding" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 RGD:621425 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0009887
GO:GO:0030326 GO:GO:0060037 GO:GO:0001843 GO:GO:0040015
GO:GO:0005901 GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
GO:GO:0060644 GO:GO:0008544 GO:GO:0016485 GO:GO:0050680
GO:GO:0001658 GO:GO:0072661 GO:GO:0035137 GO:GO:0007224
GO:GO:0045668 GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
GO:GO:0021997 GO:GO:0008589 GO:GO:0045879 GO:GO:0060603
GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 eggNOG:NOG313603 KO:K06225 CTD:5727
HOGENOM:HOG000231331 HOVERGEN:HBG003801 OrthoDB:EOG40S0DT
TIGRFAMs:TIGR00918 OMA:APDRDYL EMBL:AY357891 IPI:IPI00396901
RefSeq:NP_446018.1 UniGene:Rn.102312 STRING:Q6UY90
Ensembl:ENSRNOT00000026287 GeneID:89830 KEGG:rno:89830
InParanoid:Q6UY90 NextBio:617756 Genevestigator:Q6UY90
Uniprot:Q6UY90
Length = 1434
Score = 192 (72.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 451 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 510
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 511 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 570
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 571 FAMVLLIFPAILSM 584
Score = 64 (27.6 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
+AP L K+VV+ +FL S+ +TR+ GL+ ++PR++
Sbjct: 726 YAPFLLRPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 771
Score = 40 (19.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 1042 IVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVAL 1088
>UNIPROTKB|Q13635 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0008158 "hedgehog receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0008544 "epidermis development"
evidence=IEA] [GO:0010157 "response to chlorate" evidence=IEA]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051782 "negative regulation of cell division"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0060644 "mammary gland epithelial cell
differentiation" evidence=IEA] [GO:0061005 "cell differentiation
involved in kidney development" evidence=IEA] [GO:0072203 "cell
proliferation involved in metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEP;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0016485 "protein processing"
evidence=ISS] [GO:0030326 "embryonic limb morphogenesis"
evidence=ISS] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=ISS] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISS] [GO:0072001 "renal
system development" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005113 "patched binding" evidence=IPI]
[GO:0097108 "hedgehog family protein binding" evidence=IPI]
[GO:0005119 "smoothened binding" evidence=IPI] [GO:0030332 "cyclin
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IMP] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=ISS;TAS] [GO:0071397
"cellular response to cholesterol" evidence=ISS;IMP] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IDA]
[GO:0015485 "cholesterol binding" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IDA]
[GO:0005901 "caveola" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0021997 "neural plate axis specification"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0060037 "pharyngeal system development" evidence=IMP]
[GO:0021532 "neural tube patterning" evidence=IMP] [GO:0061053
"somite development" evidence=IMP] [GO:0035108 "limb morphogenesis"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 GO:GO:0043231
GO:GO:0016021 GO:GO:0007346 GO:GO:0048471 Reactome:REACT_111102
GO:GO:0043616 GO:GO:0007420 GO:GO:0003007 GO:GO:0008201
GO:GO:0071397 GO:GO:0032880 GO:GO:0042593 GO:GO:0015485
GO:GO:0010875 GO:GO:0000122 GO:GO:0009887 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0009953 GO:GO:0030496
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:hedgehog_2pathway GO:GO:0060644
GO:GO:0008544 GO:GO:0016485 GO:GO:0050680 GO:GO:0001658
GO:GO:0072661 GO:GO:0035137 GO:GO:0007224 GO:GO:0045668
GO:GO:0008158 GO:GO:0051782 GO:GO:0021904
Pathway_Interaction_DB:glypican_3pathway GO:GO:0021997
GO:GO:0045879 Orphanet:93925 Orphanet:93924 Orphanet:280200
Orphanet:93926 Orphanet:220386 Orphanet:280195 GO:GO:0060603
GO:GO:0072001 GO:GO:0021532 GO:GO:0061005 GO:GO:0072203
GO:GO:0061053 GO:GO:0010157 eggNOG:NOG313603 KO:K06225 CTD:5727
HOVERGEN:HBG003801 OrthoDB:EOG40S0DT TIGRFAMs:TIGR00918 EMBL:U59464
EMBL:U43148 EMBL:AL161729 EMBL:AB189436 EMBL:AB189437 EMBL:AB189438
EMBL:AB189439 EMBL:AB189440 EMBL:BC043542 EMBL:AB239329
IPI:IPI00014374 IPI:IPI00643862 IPI:IPI00654901 IPI:IPI00844057
RefSeq:NP_000255.2 RefSeq:NP_001077071.1 RefSeq:NP_001077072.1
RefSeq:NP_001077073.1 RefSeq:NP_001077074.1 RefSeq:NP_001077075.1
RefSeq:NP_001077076.1 UniGene:Hs.494538 ProteinModelPortal:Q13635
SMR:Q13635 DIP:DIP-44940N STRING:Q13635 PhosphoSite:Q13635
DMDM:160415977 PRIDE:Q13635 DNASU:5727 Ensembl:ENST00000331920
Ensembl:ENST00000375274 Ensembl:ENST00000418258
Ensembl:ENST00000421141 Ensembl:ENST00000429896
Ensembl:ENST00000430669 Ensembl:ENST00000437951
Ensembl:ENST00000468211 Ensembl:ENST00000546820
Ensembl:ENST00000547672 Ensembl:ENST00000551845
Ensembl:ENST00000553011 GeneID:5727 KEGG:hsa:5727 UCSC:uc004avk.4
UCSC:uc004avm.4 UCSC:uc010mrr.3 GeneCards:GC09M098205
HGNC:HGNC:9585 HPA:CAB013717 MIM:109400 MIM:601309 MIM:605462
MIM:610828 neXtProt:NX_Q13635 Orphanet:377 PharmGKB:PA33937
InParanoid:Q13635 OMA:APDRDYL PhylomeDB:Q13635 ChiTaRS:PTCH1
GenomeRNAi:5727 NextBio:22266 ArrayExpress:Q13635 Bgee:Q13635
CleanEx:HS_PTCH1 Genevestigator:Q13635 GermOnline:ENSG00000185920
Uniprot:Q13635
Length = 1447
Score = 192 (72.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 465 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 524
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 525 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 584
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 585 FAMVLLIFPAILSM 598
Score = 64 (27.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
+AP L K+VV+ +FL S+ +TR+ GL+ ++PR++
Sbjct: 740 YAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 785
Score = 40 (19.1 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 1056 IVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVAL 1102
>UNIPROTKB|I3LVF2 [details] [associations]
symbol:PTCH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097108 "hedgehog family protein binding" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0072203 "cell proliferation involved in metanephros
development" evidence=IEA] [GO:0071397 "cellular response to
cholesterol" evidence=IEA] [GO:0061053 "somite development"
evidence=IEA] [GO:0061005 "cell differentiation involved in kidney
development" evidence=IEA] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=IEA] [GO:0060603 "mammary gland duct
morphogenesis" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0051782 "negative regulation of cell
division" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IEA] [GO:0035137 "hindlimb morphogenesis"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0021997 "neural plate axis specification"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0015485 "cholesterol binding" evidence=IEA] [GO:0010875
"positive regulation of cholesterol efflux" evidence=IEA]
[GO:0010157 "response to chlorate" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005901 "caveola" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0005113 "patched binding" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0007346
GO:GO:0005794 GO:GO:0048471 GO:GO:0043616 GO:GO:0007420
GO:GO:0003007 GO:GO:0008201 GO:GO:0032880 GO:GO:0042593
GO:GO:0015485 GO:GO:0010875 GO:GO:0000122 GO:GO:0030326
GO:GO:0060037 GO:GO:0001843 GO:GO:0040015 GO:GO:0005901
GO:GO:0043433 GO:GO:0030496 GO:GO:0060644 GO:GO:0008544
GO:GO:0016485 GO:GO:0050680 GO:GO:0001658 GO:GO:0072661
GO:GO:0035137 GO:GO:0007224 GO:GO:0045668 GO:GO:0008158
GO:GO:0051782 GO:GO:0021904 GO:GO:0021997 GO:GO:0045879
GO:GO:0060603 GO:GO:0061005 GO:GO:0072203 GO:GO:0010157
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:FP312856 EMBL:FP326685 Ensembl:ENSSSCT00000029331
Uniprot:I3LVF2
Length = 1453
Score = 192 (72.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 468 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 527
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 528 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 587
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 588 FAMVLLIFPAILSM 601
Score = 64 (27.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDS 199
+AP L K+VV+ +FL S+ +TR+ GL+ ++PR++
Sbjct: 743 YAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRET 788
Score = 41 (19.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 144 VTAFVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGL 189
+ +AL+ V ++GL G+K+ V V + I + + L
Sbjct: 1059 IVTVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVAL 1105
>WB|WBGene00000902 [details] [associations]
symbol:daf-6 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046626 "regulation of insulin receptor signaling
pathway" evidence=IGI] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0005886 GO:GO:0018996 GO:GO:0031410
GO:GO:0000122 GO:GO:0009653 GO:GO:0008158 GO:GO:0046626 EMBL:Z69884
eggNOG:NOG149152 GeneTree:ENSGT00680000099845 HOGENOM:HOG000018323
PIR:T21612 RefSeq:NP_510472.2 ProteinModelPortal:Q19945
STRING:Q19945 EnsemblMetazoa:F31F6.5 GeneID:181584
KEGG:cel:CELE_F31F6.5 UCSC:F31F6.5 CTD:181584 WormBase:F31F6.5
InParanoid:Q19945 OMA:ILNQWIM NextBio:914544 Uniprot:Q19945
Length = 913
Score = 178 (67.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 42/149 (28%), Positives = 80/149 (53%)
Query: 1 MFAYIS-VALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEV 59
M+A +S L + ++SSK L +G+ +LS++ + GF +GV+ +I +
Sbjct: 278 MYALVSSFTLKSSSATKIDWISSKPWLAAAGMFSTVLSIISAFGFLFILGVRYN-VINTI 336
Query: 60 IPFLVLAVGVDNMCILVNAVKRQPME-LVLETRISNALVEVGPSITLASLSEFLAFAVGS 118
IPFL++A+G+D+M L+NA Q + L + R+S L G ++T+ ++++ ++FA+G
Sbjct: 337 IPFLIIAIGIDDM-FLMNACWDQTSKSLSVPERMSKTLSHAGVAVTITNVTDVMSFAIGC 395
Query: 119 FIPMPACRVFSMXXXXXXXXXXXXQVTAF 147
+P + F + Q+T F
Sbjct: 396 ITDLPGIQFFCIYACVSVAFSYFYQLTFF 424
Score = 66 (28.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 23/131 (17%), Positives = 55/131 (41%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEY 211
+++ P + V++ +F+ + ++ GL ++ D Y+ YF + +
Sbjct: 535 KIYGPFILSNSVRIFSGLIFVVYLAIAMYGCYNFREGLNPGNLVTNDHYIAKYFSDIKHF 594
Query: 212 LRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSI----PELSYIAKP 267
R+G L+ V + + S + N+L + N+ + R ++ L+Y+++
Sbjct: 595 WRIGAQLHVAVLNPPNLTISENRNELLKVVSAFENTQYT-LGREGTVFFLLEYLNYLSEL 653
Query: 268 AASWLDDFLVW 278
A D +W
Sbjct: 654 NAEVEDTERLW 664
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 147 FVALIEVHAPILG---LWGVKMVVVSVF-LAFTVA-SIALSTRI 185
FV+++ ++ + G LWGV + VS+ + ++ ++ LS I
Sbjct: 779 FVSIVSINIGVFGYMTLWGVNLDAVSMISIIMSIGFAVDLSAHI 822
>WB|WBGene00004232 [details] [associations]
symbol:ptr-18 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0018996 GO:GO:0006897 GO:GO:0045138
GO:GO:0040025 GO:GO:0008158 EMBL:AL032639
GeneTree:ENSGT00680000099845 RefSeq:NP_496761.3
ProteinModelPortal:Q9XWL9 STRING:Q9XWL9 PaxDb:Q9XWL9
EnsemblMetazoa:Y38F1A.3 GeneID:174940 KEGG:cel:CELE_Y38F1A.3
UCSC:Y38F1A.3 CTD:174940 WormBase:Y38F1A.3 eggNOG:NOG139119
HOGENOM:HOG000016895 OMA:AVIYDYI Uniprot:Q9XWL9
Length = 895
Score = 194 (73.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 45/132 (34%), Positives = 72/132 (54%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V SK GVI +LS+ S G +G + L I+ V+PFL+L++GVD++ I ++A
Sbjct: 288 VKSKPFEAFLGVICPILSLCASFGHLFWMGFEY-LPIVTVVPFLILSIGVDDVFIFIHAW 346
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
R P + + R++ L + GPSI++ SL+ L+FA+G F P PA F +
Sbjct: 347 HRTPYKHSVRDRMAETLADAGPSISITSLTNLLSFAIGIFTPTPAIYTFCVFISTAVIYD 406
Query: 140 XXXQVTAFVALI 151
Q+ F A++
Sbjct: 407 YIYQIFFFSAVL 418
Score = 47 (21.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVI 32
MF ++ + + D P+++ F + LL GV+
Sbjct: 22 MFYWVGLKIADYPKWTLFITTIWALLMAGGVV 53
>RGD|621425 [details] [associations]
symbol:Ptch1 "patched 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001841
"neural tube formation" evidence=ISO] [GO:0001843 "neural tube
closure" evidence=ISO] [GO:0003007 "heart morphogenesis"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005113 "patched binding" evidence=ISO] [GO:0005119 "smoothened
binding" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005901 "caveola" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007224 "smoothened signaling
pathway" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=ISO] [GO:0007389 "pattern specification process"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0008201 "heparin binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0008544
"epidermis development" evidence=ISO] [GO:0008589 "regulation of
smoothened signaling pathway" evidence=ISO] [GO:0009612 "response
to mechanical stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0010157 "response to chlorate"
evidence=ISO] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0015485 "cholesterol binding" evidence=ISO]
[GO:0016485 "protein processing" evidence=ISO] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=ISO] [GO:0021532
"neural tube patterning" evidence=ISO] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=ISO] [GO:0021997 "neural plate
axis specification" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0030332 "cyclin binding"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0030879
"mammary gland development" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=IEP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032526 "response to retinoic acid"
evidence=IEP] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035137 "hindlimb morphogenesis" evidence=ISO] [GO:0040008
"regulation of growth" evidence=ISO] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0043616 "keratinocyte proliferation"
evidence=ISO] [GO:0044294 "dendritic growth cone" evidence=IDA]
[GO:0044295 "axonal growth cone" evidence=IDA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=ISO]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISO] [GO:0051782 "negative regulation of
cell division" evidence=ISO] [GO:0060037 "pharyngeal system
development" evidence=ISO] [GO:0060603 "mammary gland duct
morphogenesis" evidence=ISO] [GO:0060644 "mammary gland epithelial
cell differentiation" evidence=ISO] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=ISO] [GO:0061005 "cell differentiation
involved in kidney development" evidence=ISO] [GO:0061053 "somite
development" evidence=ISO] [GO:0071397 "cellular response to
cholesterol" evidence=ISO] [GO:0072001 "renal system development"
evidence=ISO] [GO:0072203 "cell proliferation involved in
metanephros development" evidence=ISO] [GO:0072372 "primary cilium"
evidence=ISO] [GO:0072661 "protein targeting to plasma membrane"
evidence=ISO] [GO:0097108 "hedgehog family protein binding"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
InterPro:IPR000731 InterPro:IPR004766 PROSITE:PS50156 RGD:621425
GO:GO:0016021 GO:GO:0014069 GO:GO:0009612 GO:GO:0042493
GO:GO:0032355 GO:GO:0032526 GO:GO:0044295 GO:GO:0008158
GO:GO:0044294 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 IPI:IPI00396901
UniGene:Rn.102312 EMBL:AF079162 ProteinModelPortal:Q9Z2A1
STRING:Q9Z2A1 UCSC:RGD:621425 InParanoid:Q9Z2A1
Genevestigator:Q9Z2A1 Uniprot:Q9Z2A1
Length = 608
Score = 194 (73.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 45/134 (33%), Positives = 69/134 (51%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 451 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 510
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
Q + +E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 511 TGQNKRIPIEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFN 570
Query: 140 XXXQVTAFVALIEV 153
+ F A++ +
Sbjct: 571 FAMVLLIFPAILSM 584
>UNIPROTKB|H3BLX7 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021 EMBL:AL161729
HGNC:HGNC:9585 ChiTaRS:PTCH1 Ensembl:ENST00000375290 Bgee:H3BLX7
Uniprot:H3BLX7
Length = 486
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 43/111 (38%), Positives = 62/111 (55%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 344 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 403
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSM 130
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 404 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSL 454
>UNIPROTKB|G3N1D5 [details] [associations]
symbol:G3N1D5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021
GeneTree:ENSGT00680000099777 EMBL:DAAA02024005
Ensembl:ENSBTAT00000064817 OMA:KTTAMIP Uniprot:G3N1D5
Length = 563
Score = 191 (72.3 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 43/111 (38%), Positives = 62/111 (55%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV LSV +G S IG+ +V+PFL L VGVD++ +L +A
Sbjct: 452 SQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSE 511
Query: 82 --QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSM 130
Q + E R L G S+ L S+S AF + + IP+PA R FS+
Sbjct: 512 TGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSL 562
>UNIPROTKB|E1B778 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043588 "skin development" evidence=IEA] [GO:0042633
"hair cycle" evidence=IEA] [GO:0005119 "smoothened binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0043588
GO:GO:0008158 GO:GO:0042633 GeneTree:ENSGT00680000099777
TIGRFAMs:TIGR00918 CTD:8643 KO:K11101 OMA:CPPSAPN EMBL:DAAA02009018
IPI:IPI00690516 RefSeq:XP_002686477.1 RefSeq:XP_584648.3
UniGene:Bt.30284 PRIDE:E1B778 Ensembl:ENSBTAT00000033308
GeneID:507948 KEGG:bta:507948 NextBio:20868285 Uniprot:E1B778
Length = 1207
Score = 192 (72.6 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 40/132 (30%), Positives = 70/132 (53%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV L+V +G + +G+ +V+PFL L +GVD++ +L +A
Sbjct: 421 SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE 480
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
P L+ R L G S+TL S++ +AF + + +P+PA R FS+
Sbjct: 481 APPGSPLQERTGECLRRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFA 540
Query: 142 XQVTAFVALIEV 153
+ F A++ +
Sbjct: 541 AVMLVFPAVLSL 552
Score = 49 (22.3 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP+L K VV+ +F A S+ +T ++ GL V+PR + + Y +
Sbjct: 677 APLLLQSHTKAVVLVLFGALLGLSLYGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSL 736
Query: 215 GPPLYFVVKDYNYSSESR 232
++Y+ R
Sbjct: 737 YEVALVTQGGFDYAHSQR 754
Score = 37 (18.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 157 ILGLWGVKMVVVSVFLAFTVASIAL 181
I+G G+K+ + V + VASI +
Sbjct: 1006 IMGFLGIKLSAIPVVIL--VASIGI 1028
Score = 37 (18.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 196 PRDSYLQGYFDNTTEYLRV--GPPLYF 220
P +L +D T E LR+ PL F
Sbjct: 881 PPPEWLHDKYDTTGENLRIPAAQPLEF 907
>MGI|MGI:1921925 [details] [associations]
symbol:Ptchd3 "patched domain containing 3" species:10090
"Mus musculus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1921925
GO:GO:0016021 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099845 CTD:374308 HOGENOM:HOG000115764
HOVERGEN:HBG082604 OrthoDB:EOG4TQM8H EMBL:AB235902 EMBL:AK015440
EMBL:AK017136 EMBL:AL663041 IPI:IPI00137418 IPI:IPI00874330
RefSeq:NP_083325.1 UniGene:Mm.61213 ProteinModelPortal:Q0EEE2
SMR:Q0EEE2 PhosphoSite:Q0EEE2 PRIDE:Q0EEE2
Ensembl:ENSMUST00000036690 GeneID:74675 KEGG:mmu:74675
UCSC:uc007mwf.2 InParanoid:Q0EEE2 OMA:HERMGEC NextBio:341360
Bgee:Q0EEE2 CleanEx:MM_PTCHD3 Genevestigator:Q0EEE2 Uniprot:Q0EEE2
Length = 906
Score = 154 (59.3 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 3 AYISVALGDTPRFSSF-YVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIP 61
AYI + L S + +K+ + + GV V +SV+ G +GV +I+ P
Sbjct: 346 AYILIILFAVVSCSRLDCIRNKMCVAVFGVFSVAMSVVSGFGLMLHLGVPFVIIVANS-P 404
Query: 62 FLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIP 121
FL+L VGVD+M I+++A ++ + + R+SN+ +V SIT+ +++ LAF G
Sbjct: 405 FLILGVGVDDMFIMISAWQKTSLSESIRERLSNSYSKVAVSITITTITNVLAFYTGITSS 464
Query: 122 MPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
+ + F + +T F A++
Sbjct: 465 FRSVQYFCIYTGTTLLFCYFYSITCFGAVM 494
Score = 86 (35.3 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 24/99 (24%), Positives = 51/99 (51%)
Query: 156 PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR-V 214
P L K +VV +++ + ++SI +++ GL+ + + DSY+ YF+ +Y
Sbjct: 550 PFLTTSKAKFIVVLLYIFYIISSIYGCFQVQEGLDLRNLASDDSYITPYFNVEEDYFSDY 609
Query: 215 GPPLYFVVKD-YNY-SSESRHTNQLCSISQCDSNSLLNE 251
GP + +V + NY ++ R C ++Q + N +++
Sbjct: 610 GPRVMVIVTESVNYWDNDVRQKLDKC-MTQFEENEYVDK 647
>MGI|MGI:1095405 [details] [associations]
symbol:Ptch2 "patched homolog 2" species:10090 "Mus
musculus" [GO:0005119 "smoothened binding" evidence=ISO]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0008544
"epidermis development" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0097108 "hedgehog family protein
binding" evidence=ISO] InterPro:IPR000731 InterPro:IPR003392
InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156 MGI:MGI:1095405
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
EMBL:AL671866 GeneTree:ENSGT00680000099777 eggNOG:NOG313603
HOGENOM:HOG000231331 HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 CTD:8643
KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V EMBL:AJ133482 EMBL:AJ133483
EMBL:AJ133484 EMBL:AJ133485 EMBL:AB010833 IPI:IPI00131879
PIR:T13952 RefSeq:NP_032984.1 UniGene:Mm.287037
ProteinModelPortal:O35595 STRING:O35595 PhosphoSite:O35595
PRIDE:O35595 DNASU:19207 Ensembl:ENSMUST00000030443 GeneID:19207
KEGG:mmu:19207 UCSC:uc008uhx.1 InParanoid:A2AE82 NextBio:295942
Bgee:O35595 CleanEx:MM_PTCH2 Genevestigator:O35595
GermOnline:ENSMUSG00000028681 Uniprot:O35595
Length = 1182
Score = 193 (73.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 39/132 (29%), Positives = 71/132 (53%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV L+V +G + +G+ +V+PFL L +GVD++ +L +A +
Sbjct: 421 SQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDIFLLAHAFTK 480
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
P + L R+ L G S+ L S++ +AF + + +P+PA R FS+
Sbjct: 481 APPDTPLPERMGECLRSTGTSVALTSVNNMVAFFMAALVPIPALRAFSLQAAIVVGCNFA 540
Query: 142 XQVTAFVALIEV 153
+ F A++ +
Sbjct: 541 AVMLVFPAILSL 552
Score = 45 (20.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/78 (21%), Positives = 31/78 (39%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP+L K +V+ F A S+ +T ++ GL V+PR + + Y +
Sbjct: 677 APLLLQTRAKALVLLFFGALLGLSLYGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSL 736
Query: 215 GPPLYFVVKDYNYSSESR 232
++Y+ R
Sbjct: 737 YEVALVTQGGFDYAHSQR 754
Score = 37 (18.1 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 157 ILGLWGVKMVVVSVFLAFTVASIAL 181
I+G G+K+ + V + VASI +
Sbjct: 1006 IMGFLGIKLSAIPVVIL--VASIGI 1028
Score = 37 (18.1 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 196 PRDSYLQGYFDNTTEYLRV--GPPLYF 220
P +L +D T E LR+ PL F
Sbjct: 881 PPPEWLHDKYDTTGENLRIPAAQPLEF 907
>UNIPROTKB|E2RHI9 [details] [associations]
symbol:PTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0008158
GeneTree:ENSGT00680000099777 TIGRFAMs:TIGR00918 CTD:8643 KO:K11101
OMA:CPPSAPN EMBL:AAEX03009785 RefSeq:XP_539636.3
Ensembl:ENSCAFT00000007564 GeneID:482519 KEGG:cfa:482519
Uniprot:E2RHI9
Length = 1207
Score = 192 (72.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 40/132 (30%), Positives = 69/132 (52%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV L+V +G + +G+ +V+PFL L +GVD++ +L +A
Sbjct: 421 SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE 480
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
P L+ R L G S+ L S+S +AF + + +P+PA R FS+
Sbjct: 481 APPGTPLQERTGECLQRTGTSVALTSISHMVAFFMAALVPIPALRAFSLQAAIVVGCNFA 540
Query: 142 XQVTAFVALIEV 153
+ F A++ +
Sbjct: 541 AVMLVFPAVLSL 552
Score = 46 (21.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP+L K +V+ +F A S+ +T ++ GL V+PR + + Y +
Sbjct: 677 APLLLQSHSKAIVLVLFGALLGLSLYGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSL 736
Query: 215 GPPLYFVVKDYNYSSESR 232
++Y+ R
Sbjct: 737 YEVALVTQGGFDYAHSQR 754
Score = 37 (18.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 196 PRDSYLQGYFDNTTEYLRV--GPPLYF 220
P +L +D T E LR+ PL F
Sbjct: 881 PPPEWLHDKYDTTGENLRIPAAQPLEF 907
>WB|WBGene00004220 [details] [associations]
symbol:ptr-5 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080936 PIR:T25657
RefSeq:NP_510810.3 ProteinModelPortal:P91184 PaxDb:P91184
EnsemblMetazoa:C53C11.3 GeneID:181764 KEGG:cel:CELE_C53C11.3
UCSC:C53C11.3 CTD:181764 WormBase:C53C11.3 eggNOG:NOG257397
HOGENOM:HOG000020765 InParanoid:P91184 OMA:RIRDGYT NextBio:915242
Uniprot:P91184
Length = 961
Score = 187 (70.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 40/152 (26%), Positives = 83/152 (54%)
Query: 4 YISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFL 63
++S+ + T + + K+L+ L V+ +L++ + G S +G+++ ++ V+PFL
Sbjct: 337 FVSLCVILTAVYHNCLDQGKLLISLGAVLCPILAITSTYGIVSILGMRTNSFML-VMPFL 395
Query: 64 VLAVGVDNMCILVNAVKRQPMELVLET--RISNALVEVGPSITLASLSEFLAFAVGSFIP 121
V+ +GVD+ +++++ +++ T R+ VGPSIT+ SL++FL+FA+G+ P
Sbjct: 396 VMGIGVDSCFLMIHSWQKERRAQASGTGNRLGMVYESVGPSITITSLTDFLSFAIGALAP 455
Query: 122 MPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
P R+F + Q+ F ++ V
Sbjct: 456 TPETRLFCIASSIALALTYILQLVLFGPILAV 487
>WB|WBGene00004224 [details] [associations]
symbol:ptr-10 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 eggNOG:NOG149152
GeneTree:ENSGT00680000099777 EMBL:FO081477 HOGENOM:HOG000020462
PIR:T29590 RefSeq:NP_491658.2 ProteinModelPortal:P91346
EnsemblMetazoa:F55F8.1.1 EnsemblMetazoa:F55F8.1.2 GeneID:172229
KEGG:cel:CELE_F55F8.1 UCSC:F55F8.1.1 CTD:172229 WormBase:F55F8.1
InParanoid:P91346 OMA:HGINITY NextBio:874595 Uniprot:P91346
Length = 900
Score = 177 (67.4 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 40/139 (28%), Positives = 76/139 (54%)
Query: 19 YVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNA 78
+V +K +L + GV + + ++G + + ++ II V+PFLV+AVG DNM ++V +
Sbjct: 298 WVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQYNDIIA-VMPFLVVAVGTDNMFLMVAS 356
Query: 79 VKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXX 138
+KR L + RI+ + + SI + +L++ L+F VG+ +PA ++F +
Sbjct: 357 LKRTDRNLKYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLL 416
Query: 139 XXXXQVTAFVALIEVHAPI 157
Q+T F A++ + I
Sbjct: 417 TFAYQLTFFCAILVYYTRI 435
Score = 54 (24.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTE-YL 212
+AP+L ++ + +L + SI T ++ GLE +L DSY ++ + Y
Sbjct: 512 YAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHYW 571
Query: 213 RVGPPLYFVVKD 224
G L VV +
Sbjct: 572 HYGASLQIVVSN 583
>WB|WBGene00004230 [details] [associations]
symbol:ptr-16 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
EMBL:FO081216 GeneTree:ENSGT00680000099845 PIR:T31739
RefSeq:NP_503388.2 ProteinModelPortal:O16307 EnsemblMetazoa:T21H3.2
GeneID:191750 KEGG:cel:CELE_T21H3.2 UCSC:T21H3.2 CTD:191750
WormBase:T21H3.2 eggNOG:NOG318074 HOGENOM:HOG000016269
InParanoid:O16307 NextBio:950208 Uniprot:O16307
Length = 820
Score = 183 (69.5 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 41/134 (30%), Positives = 72/134 (53%)
Query: 18 FYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVN 77
F S V++ + G+ +++ + GF G I + V+PFL++ VG D++ I+++
Sbjct: 207 FVFSHNVVMAILGIAGPLMATGTAFGFLFLFGFPFNSITL-VMPFLIIGVGCDDVFIIIH 265
Query: 78 AVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXX 137
A+++ LE RI+ + E GPSIT+ S + L+FA+G P PA +F +
Sbjct: 266 AMRKTDKSESLEDRIAETMEEAGPSITVTSATNCLSFAIGIATPTPAISLFCLYTCVAVA 325
Query: 138 XXXXXQVTAFVALI 151
Q+T FVA++
Sbjct: 326 VDFVYQLTFFVAVL 339
>UNIPROTKB|G3N231 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:DAAA02058443 Ensembl:ENSBTAT00000064106 Uniprot:G3N231
Length = 717
Score = 146 (56.5 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V +K+ + + GVI L+V+ G +GV LI+ PFL+L VGVD+M I+++A
Sbjct: 360 VRNKMWVAVFGVISTALAVVSGFGLMLYVGVPFVLIVANS-PFLILGVGVDDMFIMISAW 418
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
++ + + R+S+ +V SIT+ +++ LAF G + + F +
Sbjct: 419 QKTSLTDSISERMSDVYSKVAVSITITTVTNVLAFYTGIMTSFRSVQYFCIYTGTTLLFC 478
Query: 140 XXXQVTAFVA 149
+T F A
Sbjct: 479 YFYSITCFGA 488
Score = 82 (33.9 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 23/100 (23%), Positives = 51/100 (51%)
Query: 156 PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV- 214
P L K+ VV ++ ++ + S+ R+E GL+ + + DSY+ YF+ E+
Sbjct: 544 PFLTSTKAKICVVLLYASYIITSLYGCFRVEEGLDLRNLASDDSYITPYFNVEEEHFSTY 603
Query: 215 GPPLYFVVK---DYNYSSESRHTNQLCSISQCDSNSLLNE 251
GP + ++ DY + ++R + C ++ +++ ++E
Sbjct: 604 GPRVMVIITEALDY-WDKDARQKLEKC-LADFENSEYVDE 641
>WB|WBGene00004231 [details] [associations]
symbol:ptr-17 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 EMBL:AL034393
GeneTree:ENSGT00680000099845 RefSeq:NP_001021732.1
UniGene:Cel.18390 ProteinModelPortal:Q5DTE5
EnsemblMetazoa:Y18D10A.7c GeneID:173150 KEGG:cel:CELE_Y18D10A.7
UCSC:Y18D10A.7c CTD:173150 WormBase:Y18D10A.7c eggNOG:NOG296440
HOGENOM:HOG000137660 InParanoid:Q5DTE5 OMA:CAIISST NextBio:878477
Uniprot:Q5DTE5
Length = 936
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 44/134 (32%), Positives = 69/134 (51%)
Query: 19 YVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIM-EVIPFLVLAVGVDNMCILVN 77
+V SK LLG+ GV++ M +++ S G V T + M V+PFL L +G+D+ +++
Sbjct: 327 WVLSKPLLGICGVLVTMCAIISSTGLLMLFNV--TFVDMCTVMPFLSLTIGIDDTFLMLA 384
Query: 78 AVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXX 137
A L E RI A+ SI++ SL++ LAF +GS P+PA F
Sbjct: 385 AWHETDRNLPYEKRIEKAMRHAAVSISITSLTDALAFLIGSIAPLPAVIYFCYYSSAAIL 444
Query: 138 XXXXXQVTAFVALI 151
+T FVA++
Sbjct: 445 FIFLYVLTMFVAVL 458
>UNIPROTKB|F1LW60 [details] [associations]
symbol:F1LW60 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008158 "hedgehog receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0043588 GO:GO:0008158 GO:GO:0042633
IPI:IPI00870096 Ensembl:ENSRNOT00000033843 Uniprot:F1LW60
Length = 948
Score = 188 (71.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 39/132 (29%), Positives = 69/132 (52%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ +GL+GV+LV L+V +G + +G+ +V+PFL L +GVD++ +L +A +
Sbjct: 334 SQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDIFLLAHAFTK 393
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
P L R+ L G S+ L S++ +AF + +P+PA R FS+
Sbjct: 394 APPNTPLPERMGECLRRTGTSVALTSINNMVAFFMAVLVPIPALRAFSLQAAIVVGCNFA 453
Query: 142 XQVTAFVALIEV 153
+ F A++ +
Sbjct: 454 AVMLVFPAVLSL 465
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 196 PRDSYLQGYFDNTTEYLRV--GPPLYF 220
P +L +D T E LR+ PL F
Sbjct: 651 PPPEWLHDKYDTTGENLRIPAAQPLEF 677
>UNIPROTKB|Q9Y6C5 [details] [associations]
symbol:PTCH2 "Protein patched homolog 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042633 "hair cycle" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0097108 "hedgehog family protein
binding" evidence=TAS;IPI] [GO:0005119 "smoothened binding"
evidence=IPI] [GO:0008158 "hedgehog receptor activity"
evidence=TAS] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=TAS] InterPro:IPR000731
InterPro:IPR003392 InterPro:IPR004766 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 Reactome:REACT_111102 GO:GO:0043588
Pathway_Interaction_DB:hedgehog_2pathway MIM:155255 GO:GO:0008158
EMBL:AL592166 GO:GO:0045879 Orphanet:141276 EMBL:AL136380
GO:GO:0042633 eggNOG:NOG313603 HOGENOM:HOG000231331
HOVERGEN:HBG003801 TIGRFAMs:TIGR00918 MIM:605462 EMBL:AF091501
EMBL:AF087651 EMBL:AF119569 EMBL:AY358555 EMBL:AY359016
EMBL:AY438664 IPI:IPI00419647 IPI:IPI00471943 RefSeq:NP_001159764.1
RefSeq:NP_003729.3 UniGene:Hs.591497 ProteinModelPortal:Q9Y6C5
IntAct:Q9Y6C5 STRING:Q9Y6C5 PhosphoSite:Q9Y6C5 DMDM:12643356
PRIDE:Q9Y6C5 DNASU:8643 Ensembl:ENST00000372192
Ensembl:ENST00000447098 GeneID:8643 KEGG:hsa:8643 UCSC:uc010olf.2
UCSC:uc021omv.1 CTD:8643 GeneCards:GC01M045286 HGNC:HGNC:9586
HPA:HPA046839 MIM:603673 neXtProt:NX_Q9Y6C5 PharmGKB:PA33938
InParanoid:Q9Y6C5 KO:K11101 OMA:CPPSAPN OrthoDB:EOG49CQ6V
PhylomeDB:Q9Y6C5 GenomeRNAi:8643 NextBio:32403 ArrayExpress:Q9Y6C5
Bgee:Q9Y6C5 CleanEx:HS_PTCH2 Genevestigator:Q9Y6C5
GermOnline:ENSG00000117425 GO:GO:0097108 Uniprot:Q9Y6C5
Length = 1203
Score = 180 (68.4 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 26 LGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQPME 85
+GL+GV+LV L+V +G + +G+ +V+PFL L +GVD++ +L +A
Sbjct: 425 VGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDVFLLAHAFTEALPG 484
Query: 86 LVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVT 145
L+ R+ L G S+ L S++ AF + + +P+PA R FS+ +
Sbjct: 485 TPLQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVML 544
Query: 146 AFVALIEV 153
F A++ +
Sbjct: 545 VFPAILSL 552
Score = 48 (22.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
AP+L K +V+ +F A S+ +T ++ GL V+PR + + Y +
Sbjct: 677 APLLLQSHAKAIVLVLFGALLGLSLYGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSL 736
Query: 215 GPPLYFVVKDYNYSSESR 232
++Y+ R
Sbjct: 737 YEVALVTQGGFDYAHSQR 754
Score = 43 (20.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 196 PRDSYLQGYFDNTTEYLRVGP--PLYF 220
P +L +D T E LR+ P PL F
Sbjct: 881 PPPEWLHDKYDTTGENLRIPPAQPLEF 907
>UNIPROTKB|F1MMY0 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:DAAA02058443 IPI:IPI00685505 Ensembl:ENSBTAT00000008189
OMA:DECEADI Uniprot:F1MMY0
Length = 931
Score = 146 (56.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V +K+ + + GVI L+V+ G +GV LI+ PFL+L VGVD+M I+++A
Sbjct: 386 VRNKMWVAVFGVISTALAVVSGFGLMLYVGVPFVLIVANS-PFLILGVGVDDMFIMISAW 444
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
++ + + R+S+ +V SIT+ +++ LAF G + + F +
Sbjct: 445 QKTSLTDSISERMSDVYSKVAVSITITTVTNVLAFYTGIMTSFRSVQYFCIYTGTTLLFC 504
Query: 140 XXXQVTAFVA 149
+T F A
Sbjct: 505 YFYSITCFGA 514
Score = 82 (33.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 23/100 (23%), Positives = 51/100 (51%)
Query: 156 PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV- 214
P L K+ VV ++ ++ + S+ R+E GL+ + + DSY+ YF+ E+
Sbjct: 575 PFLTSTKAKICVVLLYASYIITSLYGCFRVEEGLDLRNLASDDSYITPYFNVEEEHFSTY 634
Query: 215 GPPLYFVVK---DYNYSSESRHTNQLCSISQCDSNSLLNE 251
GP + ++ DY + ++R + C ++ +++ ++E
Sbjct: 635 GPRVMVIITEALDY-WDKDARQKLEKC-LADFENSEYVDE 672
>WB|WBGene00004233 [details] [associations]
symbol:ptr-19 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 eggNOG:NOG149152
GeneTree:ENSGT00680000099845 EMBL:AL021482 GeneID:191751
KEGG:cel:CELE_Y39A1B.2 CTD:191751 PIR:T26746 RefSeq:NP_001255085.1
ProteinModelPortal:Q9XXR9 EnsemblMetazoa:Y39A1B.2a UCSC:Y39A1B.2
WormBase:Y39A1B.2a HOGENOM:HOG000021284 InParanoid:Q9XXR9
OMA:ANQSRAM NextBio:950212 ArrayExpress:Q9XXR9 Uniprot:Q9XXR9
Length = 1003
Score = 165 (63.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
S+ L + GVI +++ +VG G T + + PF+V +VGVDN+ IL++A +
Sbjct: 320 SRPWLAIGGVISAAMAIASAVGILLLAGYGMTSVAYSM-PFIVFSVGVDNVFILLSAWRS 378
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
LE R+ + SIT+ SL++ ++F VG P P+ ++F
Sbjct: 379 TSSTETLEHRMKETFADAAVSITVTSLTDLISFGVGCATPFPSVQMFCAYAVAAVIFTYI 438
Query: 142 XQVTAFVALI 151
Q+T F A++
Sbjct: 439 YQLTFFAAVM 448
Score = 57 (25.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 163 VKMVVVSVFLAFT-VASIALSTRIEAGLEQQIVLPRDSY 200
V++V++ F + VAS T+++ GLE +LP +SY
Sbjct: 507 VRIVILVTFCVYLGVASYGC-TKVKLGLEPNDLLPENSY 544
Score = 41 (19.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 148 VALIEVHAPILGLWGVKMVVVSV 170
V+LI + P+ LW V +VS+
Sbjct: 722 VSLILIPEPVASLW-VSFSIVSI 743
>FB|FBgn0262867 [details] [associations]
symbol:Ptr "Patched-related" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0004872 "receptor activity" evidence=NAS] [GO:0010004
"gastrulation involving germ band extension" evidence=IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0016328
"lateral plasma membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008158 "hedgehog receptor activity"
evidence=IEA] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 EMBL:AE013599 GO:GO:0016021 GO:GO:0004872
GO:GO:0008158 eggNOG:NOG149152 GeneTree:ENSGT00680000099845
EMBL:BT003500 RefSeq:NP_001246145.1 RefSeq:NP_001246146.1
RefSeq:NP_610209.2 UniGene:Dm.17870 IntAct:Q86P36 STRING:Q86P36
EnsemblMetazoa:FBtr0086003 EnsemblMetazoa:FBtr0307500
EnsemblMetazoa:FBtr0307501 GeneID:35546 KEGG:dme:Dmel_CG11212
UCSC:CG11212-RA CTD:19284 FlyBase:FBgn0262867 InParanoid:Q86P36
OMA:PGYFIII OrthoDB:EOG4KD51X ChiTaRS:PTCHD3 GenomeRNAi:35546
NextBio:793966 Uniprot:Q86P36
Length = 1169
Score = 147 (56.8 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 36/153 (23%), Positives = 74/153 (48%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+F+ I+ +GD R SK LGL G + +++ L + G G++ I +
Sbjct: 283 LFSIITCMMGDAVR-------SKPFLGLMGNVSAIMATLAAFGLAMYCGIEFIGINLAA- 334
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
PFL++ +G+D+ +++ +R ++ + R+ + E SIT+ S+++F++F +G
Sbjct: 335 PFLMIGIGIDDTFVMLAGWRRTKAKMPVAERMGLMMSEAAVSITITSVTDFISFLIGIIS 394
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
P + R+F +T F A + +
Sbjct: 395 PFRSVRIFCTYSVFAVCFTFLWHITFFAACMAI 427
Score = 77 (32.2 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 155 APILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV 214
A I W K +++ F ++ V + T+I+ GLE++ + DSY +FD +Y R
Sbjct: 493 AVINNKW-CKAIIILAFASYLVGACYGITQIKEGLERRKLSREDSYSVEFFDREDDYYRE 551
Query: 215 GP 216
P
Sbjct: 552 FP 553
>FB|FBgn0003892 [details] [associations]
symbol:ptc "patched" species:7227 "Drosophila melanogaster"
[GO:0008158 "hedgehog receptor activity" evidence=IMP;TAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS;TAS]
[GO:0007224 "smoothened signaling pathway"
evidence=IGI;NAS;IMP;TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IGI;TAS] [GO:0048099 "anterior/posterior lineage
restriction, imaginal disc" evidence=TAS] [GO:0007350 "blastoderm
segmentation" evidence=NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=IMP] [GO:0030707 "ovarian follicle cell
development" evidence=TAS] [GO:0007422 "peripheral nervous system
development" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0009880 "embryonic pattern specification"
evidence=TAS] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0048100 "wing disc anterior/posterior
pattern formation" evidence=TAS] [GO:0007455 "eye-antennal disc
morphogenesis" evidence=IMP] [GO:0016311 "dephosphorylation"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0009952
"anterior/posterior pattern specification" evidence=NAS]
[GO:0048103 "somatic stem cell division" evidence=TAS] [GO:0042078
"germ-line stem cell division" evidence=TAS] [GO:0042306
"regulation of protein import into nucleus" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035225
"determination of genital disc primordium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0055088 "lipid homeostasis"
evidence=IMP] [GO:0030228 "lipoprotein particle receptor activity"
evidence=IDA] [GO:0008406 "gonad development" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 InterPro:IPR004766
Pfam:PF02460 PROSITE:PS50156 EMBL:AE013599 GO:GO:0007346
GO:GO:0048471 GO:GO:0007411 GO:GO:0005887 GO:GO:0008406
GO:GO:0030707 GO:GO:0006508 GO:GO:0007422 GO:GO:0035225
GO:GO:0055088 GO:GO:0016311 GO:GO:0030139 GO:GO:0007367
GO:GO:0042306 GO:GO:0007476 GO:GO:0009880 GO:GO:0007224
GO:GO:0030228 GO:GO:0001746 GO:GO:0007455 GO:GO:0008158
GO:GO:0048103 GO:GO:0042078 GO:GO:0045879 GO:GO:0048100
HOGENOM:HOG000228313 GO:GO:0048099 GeneTree:ENSGT00680000099777
eggNOG:NOG313603 KO:K06225 TIGRFAMs:TIGR00918 OMA:APDRDYL
EMBL:M28999 EMBL:M28418 EMBL:X17558 PIR:S06119 RefSeq:NP_523661.2
UniGene:Dm.2630 ProteinModelPortal:P18502 DIP:DIP-634N
STRING:P18502 TCDB:2.A.6.6.2 EnsemblMetazoa:FBtr0089427
GeneID:35851 KEGG:dme:Dmel_CG2411 UCSC:CG2411-RA CTD:35851
FlyBase:FBgn0003892 InParanoid:P18502 OrthoDB:EOG4BRV1N
PhylomeDB:P18502 GenomeRNAi:35851 NextBio:795513 Bgee:P18502
GermOnline:CG2411 Uniprot:P18502
Length = 1286
Score = 147 (56.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 26 LGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQPME 85
+G++GV+L+ S +G + +G+ +V+PFL L +GVD++ +L A
Sbjct: 460 VGVAGVLLMCFSTAAGLGLSALLGIVFNAASTQVVPFLALGLGVDHIFMLTAAYAESNRR 519
Query: 86 LVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVT 145
+T++ L +VGPSI ++ S +F +FIP+PA +VF + +
Sbjct: 520 E--QTKL--ILKKVGPSILFSACSTAGSFFAAAFIPVPALKVFCLQAAIVMCSNLAAALL 575
Query: 146 AFVALIEV 153
F A+I +
Sbjct: 576 VFPAMISL 583
Score = 75 (31.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 154 HAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTT 209
+ P L VK + V FLA ++S+ STR++ GL+ ++P+DS + D T
Sbjct: 670 YTPFLMRSWVKFLTVMGFLAALISSLYASTRLQDGLDIIDLVPKDSNEHKFLDAQT 725
Score = 42 (19.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 149 ALIEVHAPILGLWGVKMVVVSV-------FLAFTVASIALS 182
AL+ V +L +W +V++SV F A T+ I LS
Sbjct: 967 ALVLVSLLLLSVWAAVLVILSVLASLAQIFGAMTLLGIKLS 1007
>WB|WBGene00004210 [details] [associations]
symbol:ptc-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0031410 "cytoplasmic vesicle" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0016324
GO:GO:0018996 GO:GO:0031410 GO:GO:0040011 GO:GO:0040018
GO:GO:0008158 GeneTree:ENSGT00680000099777 EMBL:FO081635
UniGene:Cel.5929 GeneID:173631 KEGG:cel:CELE_Y110A2AL.8 CTD:173631
RefSeq:NP_001122650.1 ProteinModelPortal:H2L0G5
EnsemblMetazoa:Y110A2AL.8c WormBase:Y110A2AL.8c OMA:MNPISAV
Uniprot:H2L0G5
Length = 1367
Score = 171 (65.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 40/117 (34%), Positives = 66/117 (56%)
Query: 14 RFSSFY--VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDN 71
RF ++ V S V L + GVILV +S + +GF + +G+ +V+PFL L +G+D+
Sbjct: 648 RFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFLSLGLGIDD 707
Query: 72 MCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVF 128
M +L++ + + + + I L E G S+ L S++ LAF G +P+PA R F
Sbjct: 708 MFLLLHNYD-EIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALRSF 763
>UNIPROTKB|Q3KNS1 [details] [associations]
symbol:PTCHD3 "Patched domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0008158 "hedgehog receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007286 "spermatid development" evidence=NAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0007286 GO:GO:0008158 eggNOG:NOG149152 EMBL:AK126025
EMBL:AL355493 EMBL:BC107139 IPI:IPI00418990 RefSeq:NP_001030014.2
UniGene:Hs.631832 ProteinModelPortal:Q3KNS1 IntAct:Q3KNS1
STRING:Q3KNS1 PhosphoSite:Q3KNS1 DMDM:160419230 PRIDE:Q3KNS1
Ensembl:ENST00000438700 Ensembl:ENST00000570930 GeneID:374308
KEGG:hsa:374308 CTD:374308 GeneCards:GC10M027728 H-InvDB:HIX0008737
H-InvDB:HIX0026004 HGNC:HGNC:24776 HPA:HPA044613 MIM:611791
neXtProt:NX_Q3KNS1 PharmGKB:PA142671117 HOGENOM:HOG000115764
HOVERGEN:HBG082604 InParanoid:Q3KNS1 OMA:FMNNIPD OrthoDB:EOG4TQM8H
GenomeRNAi:374308 NextBio:100150 Bgee:Q3KNS1 CleanEx:HS_PTCHD3
Genevestigator:Q3KNS1 Uniprot:Q3KNS1
Length = 767
Score = 142 (55.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 41/150 (27%), Positives = 69/150 (46%)
Query: 3 AYISVAL-GDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIP 61
AYI + L T F + +K+ + GVI L+V+ G IGV +I+ P
Sbjct: 390 AYILIILFAVTSCFRFDCIRNKMCVAAFGVISAFLAVVSGFGLLLHIGVPFVIIVANS-P 448
Query: 62 FLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIP 121
FL+L VGVD+M I+++A + + + R+SN + SIT+ +++ LA G
Sbjct: 449 FLILGVGVDDMFIMISAWHKTNLADDIRERMSNVYSKAAVSITITTITNILALYTGIMSS 508
Query: 122 MPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
+ + F + +T F A +
Sbjct: 509 FRSVQCFCIYTGMTLLFCYFYNITCFGAFM 538
Score = 70 (29.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 164 KMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLR-VGPPLYFVV 222
K VV +++ + ++SI ++ GL+ + + DSY+ YF+ Y GP + +V
Sbjct: 602 KYFVVFIYVLYIISSIYGCFHVQEGLDLRNLASDDSYITPYFNVEENYFSDYGPRVMVIV 661
Query: 223 -KDYNY-SSESRHTNQLCS 239
K +Y + R + C+
Sbjct: 662 TKKVDYWDKDVRQKLENCT 680
>WB|WBGene00004229 [details] [associations]
symbol:ptr-15 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:FO080767 PIR:T33217 RefSeq:NP_504760.1
ProteinModelPortal:O61894 SMR:O61894 STRING:O61894
EnsemblMetazoa:T07H8.6 GeneID:191749 KEGG:cel:CELE_T07H8.6
UCSC:T07H8.6 CTD:191749 WormBase:T07H8.6 eggNOG:NOG301271
HOGENOM:HOG000021530 InParanoid:O61894 OMA:VCTLISM NextBio:950204
Uniprot:O61894
Length = 840
Score = 165 (63.1 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 38/137 (27%), Positives = 76/137 (55%)
Query: 19 YVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNA 78
+V+SK + + G+++ ++++ + G A+GV + + V+PF+ LA+GVD++ +++ A
Sbjct: 286 WVTSKPIEAMIGILVSSMAIVSAGGLLFALGVPF-INQVTVMPFIALAIGVDDVYVMLGA 344
Query: 79 VKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXX 138
+ L + R+ AL E G +IT+ SL+ L+F +G++ PA +F
Sbjct: 345 WQDTRRTLDAKKRMGLALEEAGSAITVTSLTSVLSFGIGTYSTTPAIAIFCKFIALAIMF 404
Query: 139 XXXXQVTAFVALIEVHA 155
Q+T F A++ + A
Sbjct: 405 DWFYQLTFFAAVMAMGA 421
>UNIPROTKB|I3LN22 [details] [associations]
symbol:PTCHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:FP326681 Ensembl:ENSSSCT00000031258 OMA:FWLRTYV Uniprot:I3LN22
Length = 441
Score = 127 (49.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 30 GVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQPMELVLE 89
GVI L+V+ G IGV I+ PFL+L VGVD+M I++ A ++ + L+
Sbjct: 7 GVISAALAVVSVFGLMLYIGVPFVTIVANS-PFLILGVGVDDMFIMLAAWQKTNIVDNLK 65
Query: 90 TRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVA 149
R+S +V SIT+ +++ LAF G + + F + +T F A
Sbjct: 66 ERMSTVYSKVAVSITITTITNVLAFYTGIMTSFRSLQYFCIYTGTTLLFCYLYNITCFGA 125
Query: 150 LI 151
+
Sbjct: 126 FM 127
Score = 75 (31.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 156 PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRV- 214
P L K VV ++ + + SI +++ GL+ + + DSY+ YF+ EY +
Sbjct: 186 PFLTRPEAKFFVVLLYTLYLILSIYGCFQVQEGLDLRNLASDDSYITPYFNVEEEYFSIY 245
Query: 215 GPPLYFVVKD-YNYSSES-RHTNQLC 238
GP + ++ + +Y E+ R + C
Sbjct: 246 GPRVMVIITEALDYWDEATRQKLEKC 271
>WB|WBGene00004228 [details] [associations]
symbol:ptr-14 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR000731 InterPro:IPR001036 InterPro:IPR003392
Pfam:PF02460 PRINTS:PR00702 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0005215
GO:GO:0008158 EMBL:Z77134 GeneTree:ENSGT00680000099845
HOGENOM:HOG000017328 PIR:T24097 RefSeq:NP_501963.1
ProteinModelPortal:Q21883 SMR:Q21883 MINT:MINT-3384080 PaxDb:Q21883
EnsemblMetazoa:R09H10.4 GeneID:177951 KEGG:cel:CELE_R09H10.4
UCSC:R09H10.4 CTD:177951 WormBase:R09H10.4 eggNOG:NOG320277
InParanoid:Q21883 OMA:ITIYYSS NextBio:899094 Uniprot:Q21883
Length = 877
Score = 162 (62.1 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 17 SFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILV 76
S + S+ +L +L S LG++ +F G + I+ V PFL+LA+GVD+ + V
Sbjct: 288 SVHKVSEAILACVCPLLATSSALGTLFWF---GFRFGTILC-VTPFLILAIGVDDAYLQV 343
Query: 77 NAVKRQPME---LVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXX 133
+A R E + +I+ LVEVGPSI + S++ AF VG + P P +F
Sbjct: 344 HACMRLTAEDSSMTKREKIARMLVEVGPSIAITSMTNLFAFLVGIYTPTPEISLFCAGNA 403
Query: 134 XXXXXXXXXQVTAFVALIEV 153
Q+T + A++ +
Sbjct: 404 VAILFDFIYQITMYTAILSI 423
Score = 38 (18.4 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 145 TAFVALIEVHAPILG------LWGVKMVVVSVFLAFTVASIALSTRIEA 187
T FVA + + + +G +WG+ + +S +A + SI S A
Sbjct: 706 TVFVATLAITSICIGVFGFLSMWGIDLDPIS--MACLIMSIGFSVDFPA 752
>UNIPROTKB|H0Y3B8 [details] [associations]
symbol:PTCH1 "Protein patched homolog 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000731 PROSITE:PS50156 GO:GO:0016021 EMBL:AL161729
HGNC:HGNC:9585 ChiTaRS:PTCH1 Ensembl:ENST00000375271 Bgee:H0Y3B8
Uniprot:H0Y3B8
Length = 352
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 40/128 (31%), Positives = 60/128 (46%)
Query: 28 LSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR--QPME 85
LS + +L S S I V S ++M V+PFL L VGVD++ +L +A Q
Sbjct: 137 LSFTTTTLDDILKSFSDVSVIRVASGYLLM-VLPFLALGVGVDDVFLLAHAFSETGQNKR 195
Query: 86 LVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVT 145
+ E R L G S+ L S+S AF + + IP+PA R FS+ +
Sbjct: 196 IPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLL 255
Query: 146 AFVALIEV 153
F A++ +
Sbjct: 256 IFPAILSM 263
>MGI|MGI:2135958 [details] [associations]
symbol:Scap "SREBF chaperone" species:10090 "Mus musculus"
[GO:0001666 "response to hypoxia" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0008202
"steroid metabolic process" evidence=IEA] [GO:0008203 "cholesterol
metabolic process" evidence=IDA] [GO:0015485 "cholesterol binding"
evidence=TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019217 "regulation of
fatty acid metabolic process" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0032868 "response to insulin stimulus"
evidence=IMP] [GO:0032933 "SREBP signaling pathway" evidence=ISO]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IMP] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045540 "regulation of cholesterol biosynthetic
process" evidence=IMP] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2135958
GO:GO:0016021 GO:GO:0043234 GO:GO:0012507 GO:GO:0000139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0007568 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0015485 GO:GO:0032868
GO:GO:0045540 CTD:22937 eggNOG:NOG264568 HOGENOM:HOG000230538
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
OMA:CLPPAKP OrthoDB:EOG42Z4PB ChiTaRS:SCAP EMBL:AK172912
EMBL:AK146658 EMBL:AK150275 EMBL:AK152478 EMBL:AK153330
EMBL:BC051066 EMBL:BC055472 EMBL:BC069955 EMBL:BC070437
EMBL:BC072633 IPI:IPI00856221 RefSeq:NP_001001144.2
RefSeq:NP_001096632.1 UniGene:Mm.288741 ProteinModelPortal:Q6GQT6
SMR:Q6GQT6 STRING:Q6GQT6 PhosphoSite:Q6GQT6 PaxDb:Q6GQT6
PRIDE:Q6GQT6 Ensembl:ENSMUST00000098350 GeneID:235623
KEGG:mmu:235623 UCSC:uc009rtw.2 GeneTree:ENSGT00390000000003
InParanoid:Q6GQT6 NextBio:382797 Bgee:Q6GQT6 CleanEx:MM_SCAP
Genevestigator:Q6GQT6 Uniprot:Q6GQT6
Length = 1276
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 43/153 (28%), Positives = 76/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI + +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNAATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>WB|WBGene00004218 [details] [associations]
symbol:ptr-3 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 GO:GO:0040018
GO:GO:0019915 GO:GO:0040002 GO:GO:0040025 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080319 PIR:T28706
RefSeq:NP_493718.1 ProteinModelPortal:O16530 PaxDb:O16530
EnsemblMetazoa:C41D7.2 GeneID:173426 KEGG:cel:CELE_C41D7.2
UCSC:C41D7.2 CTD:173426 WormBase:C41D7.2 eggNOG:NOG267556
HOGENOM:HOG000017328 InParanoid:O16530 OMA:EIQLFSI NextBio:879611
Uniprot:O16530
Length = 914
Score = 145 (56.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 42/150 (28%), Positives = 75/150 (50%)
Query: 15 FSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCI 74
FSS ++ +L + + ++ S+G IG + I+ V PFLVLA+GVD+ +
Sbjct: 301 FSS--ITFVPILAVMACVCPFMACGASLGAMFFIGFRFGSILC-VTPFLVLAIGVDDSYL 357
Query: 75 LVNAVKR-----------QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMP 123
+ NA +R + + + L+ RI+ +E GPSIT+ +++ LAF +G+ P
Sbjct: 358 MANAWQRITCHRRKHARFESVNVELKNRITEMFIETGPSITITTITNALAFGIGATTPAA 417
Query: 124 ACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
++FS+ +T + AL+ V
Sbjct: 418 EIQLFSIGNALAVITDFVFTITFYGALMAV 447
Score = 53 (23.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 333 NRPSTEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNK 392
N P+ E+L ALPSA+ G YST L YE + Q+ E P+ +
Sbjct: 571 NNPNQRAKLEELIESFEALPSAN------GRYSTKFWLRDYEDFLKQSEEI---DLPMEE 621
Query: 393 QGD 395
+ D
Sbjct: 622 EED 624
Score = 39 (18.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 145 TAFVALIEVHAPILGLWGVKMV----VVSVFLAFTVASIALSTRI 185
T FVA + + LG++G+ + + ++ TV SI S I
Sbjct: 761 TLFVATFSILSTSLGVFGIMSWWGADLDPIMMSATVMSIGFSVDI 805
>UNIPROTKB|F8W921 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AC099778 InterPro:IPR026964
PANTHER:PTHR22844:SF6 HGNC:HGNC:30634 ChiTaRS:SCAP IPI:IPI01015900
ProteinModelPortal:F8W921 SMR:F8W921 Ensembl:ENST00000441517
UCSC:uc011baz.1 ArrayExpress:F8W921 Bgee:F8W921 Uniprot:F8W921
Length = 1023
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 40 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 94
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 95 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 154
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 155 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 187
>WB|WBGene00004236 [details] [associations]
symbol:ptr-22 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:AL132853 GeneID:191753
KEGG:cel:CELE_Y80D3A.7 CTD:191753 RefSeq:NP_001256834.1
ProteinModelPortal:H1UBK7 EnsemblMetazoa:Y80D3A.7a
WormBase:Y80D3A.7a OMA:SAHISYH Uniprot:H1UBK7
Length = 888
Score = 151 (58.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 37/135 (27%), Positives = 70/135 (51%)
Query: 22 SKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKR 81
SK L G ++ +LS + ++G SA G+ II+ + FLV+A+G+D++ I++ A R
Sbjct: 277 SKPLEACLGALIPVLSGITTIGMVSATGLAFQSIIVSTL-FLVIAIGIDDIFIILAAWHR 335
Query: 82 QPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXX 141
L + R++ + E G S+T+ +++ ++F G P + F++
Sbjct: 336 TDKHLEIPERMALTVQEAGCSMTVTTVTNLVSFGNGVLSTTPVLQTFAIYSSVASVVCYI 395
Query: 142 XQVTAFVALIEVHAP 156
Q+ F A+I + AP
Sbjct: 396 YQLVIFPAIIAITAP 410
Score = 45 (20.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 145 TAFVALIEVHAPILG---LWGVKMVVVSVFLAFTVASIALSTRIEA 187
+A AL V+ + G +WGV M VS A + SI S I A
Sbjct: 711 SAVFALFSVNFGVFGFLSIWGVGMDPVST--ASLLMSIGFSVDISA 754
>WB|WBGene00004208 [details] [associations]
symbol:ptc-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=IDA] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0005887
GO:GO:0051301 GO:GO:0007067 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158
GeneTree:ENSGT00680000099777 EMBL:Z46812 PIR:T27969
RefSeq:NP_495662.2 ProteinModelPortal:Q09614 STRING:Q09614
PaxDb:Q09614 EnsemblMetazoa:ZK675.1.1 EnsemblMetazoa:ZK675.1.2
GeneID:174274 KEGG:cel:CELE_ZK675.1 UCSC:ZK675.1.1 CTD:174274
WormBase:ZK675.1 eggNOG:NOG313603 HOGENOM:HOG000016673
InParanoid:Q09614 KO:K06225 OMA:CQFNYTI NextBio:883327
GermOnline:ZK675.1 Uniprot:Q09614
Length = 1408
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLS--GVILVMLSVLGSVGFFSAIGVKSTLIIME 58
M AY A+ RF + +++ +GL+ GV++V + + +G + G++ +
Sbjct: 665 MLAY---AIVTQARFDNCLPATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATTQ 721
Query: 59 VIPFLVLAVGVDNMCILVNAVKRQPMELVL-ETRISNALVEVGPSITLASLSEFLAFAVG 117
++PFL L +GVDNM +L++ R ++L ++ + E G SI S++ L+F G
Sbjct: 722 IVPFLTLGIGVDNMFMLLHNY-RDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTG 780
Query: 118 SFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+ +P+PA R F +T + A+I +
Sbjct: 781 TLLPIPALRSFCAQSSILLTFNFIAILTIYPAIISI 816
>WB|WBGene00004209 [details] [associations]
symbol:ptc-2 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0040011 GO:GO:0019915 GO:GO:0008158 EMBL:FO080717
GeneTree:ENSGT00680000099777 KO:K06225 PIR:T16126
RefSeq:NP_495218.2 UniGene:Cel.32852 ProteinModelPortal:Q09540
SMR:Q09540 PaxDb:Q09540 EnsemblMetazoa:F21H12.4 GeneID:191745
KEGG:cel:CELE_F21H12.4 UCSC:F21H12.4 CTD:191745 WormBase:F21H12.4
eggNOG:NOG244490 InParanoid:Q09540 OMA:ANDNHAC NextBio:950188
Uniprot:Q09540
Length = 667
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 34/127 (26%), Positives = 65/127 (51%)
Query: 28 LSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQPMELV 87
L+GV++V + + +G + G++ +++PFL L +GVDNM +L++ R ++L
Sbjct: 144 LAGVLVVTFASVAGIGLATWFGIEFNAATTQIVPFLTLGIGVDNMFMLLHNY-RDVVKLA 202
Query: 88 L-ETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTA 146
++ + E G SI S++ L+F G+ +P+PA R F +T
Sbjct: 203 GGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTI 262
Query: 147 FVALIEV 153
+ A+I +
Sbjct: 263 YPAIISI 269
>ZFIN|ZDB-GENE-040107-41 [details] [associations]
symbol:scap "SREBF chaperone" species:7955 "Danio
rerio" [GO:0016021 "integral to membrane" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IMP] [GO:0019915 "lipid storage"
evidence=IMP] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040107-41 GO:GO:0016021 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006629
GO:GO:0019915 InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
GeneTree:ENSGT00390000000003 EMBL:BX511123 IPI:IPI00483786
Ensembl:ENSDART00000015566 Uniprot:E7EY27
Length = 1252
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 292 LFAYIYFS---TRKIDM--VRSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 346
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 347 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFT 406
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 407 FVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSI 439
>UNIPROTKB|F1PI33 [details] [associations]
symbol:SCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000731 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156
PROSITE:PS50294 SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR026964 PANTHER:PTHR22844:SF6
GeneTree:ENSGT00390000000003 EMBL:AAEX03012239 EMBL:AAEX03012240
Ensembl:ENSCAFT00000020960 Uniprot:F1PI33
Length = 1278
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>UNIPROTKB|Q12770 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9606 "Homo sapiens"
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0045541 "negative
regulation of cholesterol biosynthetic process" evidence=NAS]
[GO:0005794 "Golgi apparatus" evidence=NAS] [GO:0051082 "unfolded
protein binding" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=NAS] [GO:0032933 "SREBP signaling pathway" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0045716
"positive regulation of low-density lipoprotein particle receptor
biosynthetic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_111217 InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0005783 GO:GO:0016021 GO:GO:0005794
GO:GO:0043234 GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0007568 GO:GO:0051082 GO:GO:0001666 GO:GO:0008203
GO:GO:0042304 GO:GO:0032868 GO:GO:0045541 GO:GO:0045716
GO:GO:0032933 CTD:22937 eggNOG:NOG264568 HOGENOM:HOG000230538
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
EMBL:D83782 EMBL:AK027402 EMBL:BC020987 EMBL:AK075528
IPI:IPI00006280 IPI:IPI00290700 IPI:IPI00290701 IPI:IPI00396357
RefSeq:NP_036367.2 UniGene:Hs.531789 ProteinModelPortal:Q12770
SMR:Q12770 IntAct:Q12770 STRING:Q12770 PhosphoSite:Q12770
DMDM:116242783 PaxDb:Q12770 PRIDE:Q12770 Ensembl:ENST00000265565
Ensembl:ENST00000545718 GeneID:22937 KEGG:hsa:22937 UCSC:uc003crg.2
UCSC:uc003crh.1 GeneCards:GC03M047430 H-InvDB:HIX0031165
HGNC:HGNC:30634 HPA:HPA004713 MIM:601510 neXtProt:NX_Q12770
PharmGKB:PA162402461 InParanoid:Q12770 OMA:CLPPAKP
OrthoDB:EOG42Z4PB ChiTaRS:SCAP GenomeRNAi:22937 NextBio:43683
ArrayExpress:Q12770 Bgee:Q12770 CleanEx:HS_SCAP
Genevestigator:Q12770 GermOnline:ENSG00000114650 Uniprot:Q12770
Length = 1279
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>UNIPROTKB|Q5MNU5 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9823 "Sus scrofa" [GO:0012507
"ER to Golgi transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0016021
GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203
CTD:22937 eggNOG:NOG264568 HOVERGEN:HBG019538 InterPro:IPR026964
PANTHER:PTHR22844:SF6 OrthoDB:EOG42Z4PB EMBL:AY705447 EMBL:AY705448
EMBL:AY858690 EMBL:DQ076089 EMBL:DQ076090 EMBL:DQ076091
EMBL:DQ076092 EMBL:AY340938 RefSeq:NP_001185623.2 UniGene:Ssc.4111
UniGene:Ssc.96408 UniGene:Ssc.96851 ProteinModelPortal:Q5MNU5
STRING:Q5MNU5 GeneID:494015 KEGG:ssc:494015 Uniprot:Q5MNU5
Length = 1279
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMPFFTTVLSI 442
>UNIPROTKB|F1SNT3 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9823 "Sus scrofa" [GO:0045540
"regulation of cholesterol biosynthetic process" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0032933 "SREBP signaling pathway" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
GeneTree:ENSGT00390000000003 EMBL:CU466436
Ensembl:ENSSSCT00000028855 ArrayExpress:F1SNT3 Uniprot:F1SNT3
Length = 1280
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>RGD|1309378 [details] [associations]
symbol:Scap "SREBF chaperone" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0001666 "response to
hypoxia" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA;ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0008203 "cholesterol metabolic process" evidence=IEA;ISO]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019217
"regulation of fatty acid metabolic process" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0032868
"response to insulin stimulus" evidence=IEA;ISO] [GO:0032933 "SREBP
signaling pathway" evidence=IEA;ISO] [GO:0042304 "regulation of
fatty acid biosynthetic process" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045540 "regulation
of cholesterol biosynthetic process" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR000731 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156
PROSITE:PS50294 SMART:SM00320 RGD:1309378 GO:GO:0043231
GO:GO:0016021 GO:GO:0043234 GO:GO:0012507 GO:GO:0000139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0007568 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540 CTD:22937
eggNOG:NOG264568 HOGENOM:HOG000230538 HOVERGEN:HBG019538
InterPro:IPR026964 PANTHER:PTHR22844:SF6 OMA:CLPPAKP
OrthoDB:EOG42Z4PB GeneTree:ENSGT00390000000003 EMBL:BC131852
IPI:IPI00373570 RefSeq:NP_001094436.1 UniGene:Rn.99548
ProteinModelPortal:A2RRU4 STRING:A2RRU4 PRIDE:A2RRU4
Ensembl:ENSRNOT00000028295 GeneID:301024 KEGG:rno:301024
InParanoid:A2RRU4 NextBio:647952 Genevestigator:A2RRU4
Uniprot:A2RRU4
Length = 1276
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>UNIPROTKB|A6QM06 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9913 "Bos taurus" [GO:0012507
"ER to Golgi transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0016021
GO:GO:0012507 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203
EMBL:BC148152 IPI:IPI00867348 RefSeq:NP_001095359.1
UniGene:Bt.18085 ProteinModelPortal:A6QM06 STRING:A6QM06
PRIDE:A6QM06 GeneID:507878 KEGG:bta:507878 CTD:22937
eggNOG:NOG264568 HOGENOM:HOG000230538 HOVERGEN:HBG019538
NextBio:20868256 InterPro:IPR026964 PANTHER:PTHR22844:SF6
Uniprot:A6QM06
Length = 1278
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>UNIPROTKB|F1MQ33 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:9913 "Bos taurus" [GO:0045540
"regulation of cholesterol biosynthetic process" evidence=IEA]
[GO:0042304 "regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0032933 "SREBP signaling pathway" evidence=IEA]
[GO:0032868 "response to insulin stimulus" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR000731 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50156 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
IPI:IPI00867348 UniGene:Bt.18085 InterPro:IPR026964
PANTHER:PTHR22844:SF6 OMA:CLPPAKP GeneTree:ENSGT00390000000003
EMBL:DAAA02054449 Ensembl:ENSBTAT00000020961 ArrayExpress:F1MQ33
Uniprot:F1MQ33
Length = 1278
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNMATELGIVLIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
>UNIPROTKB|P97260 [details] [associations]
symbol:SCAP "Sterol regulatory element-binding protein
cleavage-activating protein" species:10029 "Cricetulus griseus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0032933 "SREBP signaling pathway" evidence=ISS]
[GO:0035105 "sterol regulatory element binding protein import into
nucleus" evidence=IMP] [GO:0072600 "establishment of protein
localization to Golgi" evidence=IMP] [GO:0090110 "cargo loading
into COPII-coated vesicle" evidence=IDA] [GO:0030127 "COPII vesicle
coat" evidence=IDA] InterPro:IPR017986 InterPro:IPR000731
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50156 PROSITE:PS50294 SMART:SM00320 GO:GO:0005783
GO:GO:0016021 GO:GO:0012507 GO:GO:0000139 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0008203 GO:GO:0072600
GO:GO:0090110 Reactome:REACT_147840 Reactome:REACT_147768
GO:GO:0035105 Reactome:REACT_147890 Reactome:REACT_147893 CTD:22937
HOVERGEN:HBG019538 InterPro:IPR026964 PANTHER:PTHR22844:SF6
EMBL:U67060 EMBL:AF541996 PIR:T18526 RefSeq:NP_001230965.1
ProteinModelPortal:P97260 TCDB:2.A.6.6.4 GeneID:100689048
Uniprot:P97260
Length = 1276
Score = 150 (57.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ +G++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSSESWSIMKNVATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSI 442
>UNIPROTKB|F1NK67 [details] [associations]
symbol:SCAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0008203
"cholesterol metabolic process" evidence=IEA] [GO:0032868 "response
to insulin stimulus" evidence=IEA] [GO:0032933 "SREBP signaling
pathway" evidence=IEA] [GO:0042304 "regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0045540 "regulation of
cholesterol biosynthetic process" evidence=IEA] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0005789 GO:GO:0001666
GO:GO:0008203 GO:GO:0042304 GO:GO:0032868 GO:GO:0045540
GeneTree:ENSGT00390000000003 EMBL:AADN02000065 EMBL:AADN02000066
EMBL:AADN02000067 EMBL:AADN02000068 EMBL:AADN02000069
IPI:IPI00593979 Ensembl:ENSGALT00000039290 ArrayExpress:F1NK67
Uniprot:F1NK67
Length = 756
Score = 145 (56.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 1 MFAYISVALGDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVI 60
+FAYI + T + V SK L L+ V+ V+ S+L SVG + G+ TL E+
Sbjct: 295 LFAYIYFS---TRKIDM--VKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIF 349
Query: 61 PFLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI 120
P+LV+ + ++N+ +L +V P++L ++ RI+ L SI +E +G F
Sbjct: 350 PYLVVVIDLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELGIILIGYFT 409
Query: 121 PMPACRVFSMXXXXXXXXXXXXQVTAFVALIEV 153
+PA + F + Q+ F ++ +
Sbjct: 410 LVPAIQEFCLFAVVGLVSDFFLQMLFFTTVLSI 442
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 337 TEQFREKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRT 385
T Q E+ P LP G A +DL+ + S IQ SE +T
Sbjct: 544 TSQVTEQSPLGEAGLPPMPVPGGVLPAGDPKIDLSVFPSDPIQLSENQT 592
>WB|WBGene00004223 [details] [associations]
symbol:ptr-9 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR000731
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 EMBL:Z19155
GeneTree:ENSGT00680000099845 PIR:S28276 RefSeq:NP_499030.2
ProteinModelPortal:Q03602 EnsemblMetazoa:F54G8.5 GeneID:191747
KEGG:cel:CELE_F54G8.5 UCSC:F54G8.5 CTD:191747 WormBase:F54G8.5
eggNOG:NOG243310 HOGENOM:HOG000018097 InParanoid:Q03602 OMA:ESTERWI
NextBio:950196 Uniprot:Q03602
Length = 844
Score = 130 (50.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V S+ +G + ++ + S + ++ ++PFLV+++G DNM +++ +
Sbjct: 289 VKSQPFIGFFAMFNATMATIASTSLLLYLQYPFLPLVF-IMPFLVVSIGTDNMFLMLKSW 347
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXX 139
+ E R +AL E S+ L SL++ L+FA+GS A RVF
Sbjct: 348 RMTKKSSNEEQRYIHALTESAASLFLTSLTDGLSFAIGSISDFHAVRVFCTYCAMAILFM 407
Query: 140 XXXQVTAFVALIEV 153
QVT F A++ +
Sbjct: 408 FLFQVTFFNAVMSL 421
Score = 61 (26.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 147 FVALIEVHA-PILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYL 201
F +++ H IL ++ V +FLA+ SI + + GL+ +++ P DSY+
Sbjct: 456 FSSIVAKHLFKILNPLPSRIGVFFIFLAYLFISIHFAIGLPLGLDLKLLAPDDSYV 511
>UNIPROTKB|G3N2V7 [details] [associations]
symbol:G3N2V7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
OMA:KMWAAAF EMBL:DAAA02043117 Ensembl:ENSBTAT00000064822
Uniprot:G3N2V7
Length = 478
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/95 (33%), Positives = 57/95 (60%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V +K+ + + GVI L+V+ G +GV LI+ PFL+L VGVD+M I+++A+
Sbjct: 385 VQNKMWVAVFGVISTALAVVSGFGLMLYVGVPFVLIVANS-PFLILGVGVDDMFIMISAL 443
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAF 114
++ + + R+S+ +V SIT+ +++ LAF
Sbjct: 444 QKTSLTGSISKRMSDVYSKVAVSITVTTVTNVLAF 478
>WB|WBGene00004225 [details] [associations]
symbol:ptr-11 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040025 "vulval development" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460
PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996 GO:GO:0040011
GO:GO:0040018 GO:GO:0040025 GO:GO:0008158 EMBL:FO081456
GeneTree:ENSGT00680000099845 PIR:T32908 RefSeq:NP_490687.1
ProteinModelPortal:O44978 SMR:O44978 PaxDb:O44978
EnsemblMetazoa:F56C11.2 GeneID:171609 KEGG:cel:CELE_F56C11.2
UCSC:F56C11.2 CTD:171609 WormBase:F56C11.2 eggNOG:NOG278286
HOGENOM:HOG000017687 InParanoid:O44978 OMA:RAMQHIR NextBio:871995
Uniprot:O44978
Length = 820
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 14 RFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMC 73
R SS V L + ++ M + + S G +G S I V PFLVL +GVD+
Sbjct: 261 RLSS--VKMAFYLVATSLLTPMAATVASFGAICWMGFPS-FSIQCVTPFLVLGIGVDDAF 317
Query: 74 ILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSM 130
IL++ K R+ +V+VGPSIT+ SL+ +AF +G P P +F +
Sbjct: 318 ILLHRWKHHIAITDTPRRLEQVIVDVGPSITITSLTNIIAFGIGFLTPTPQMSLFCL 374
>UNIPROTKB|F1PR19 [details] [associations]
symbol:F1PR19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:AAEX03001165 Ensembl:ENSCAFT00000021893 Uniprot:F1PR19
Length = 420
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/113 (32%), Positives = 60/113 (53%)
Query: 3 AYISVAL-GDTPRFSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIP 61
AY+ + L T + V +K+ GVI V L+V+ G IGV I+ P
Sbjct: 278 AYLLIILFAITSCYRYDCVQNKIWAAAFGVISVALAVVSGFGLMLYIGVPFVTIVANS-P 336
Query: 62 FLVLAVGVDNMCILVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAF 114
FL+L+VGVD+M I+++A ++ + + R+S +V SIT ++S LA+
Sbjct: 337 FLILSVGVDDMLIMISAWQKTSAKDSMSQRLSTVYSKVAVSITFTTISNVLAY 389
>UNIPROTKB|F1Q2F3 [details] [associations]
symbol:F1Q2F3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008158 "hedgehog receptor activity" evidence=IEA]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008158 GeneTree:ENSGT00680000099845
EMBL:AAEX03017606 Ensembl:ENSCAFT00000039442 OMA:KMWAAAF
Uniprot:F1Q2F3
Length = 420
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 20 VSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAV 79
V +K+ GVI L+V+ G IGV I+ PFL+L VGVD+M I+++A
Sbjct: 295 VQNKMWAAAFGVISAALAVVSGFGLMLYIGVSFVTIVANS-PFLILGVGVDDMFIMISAW 353
Query: 80 KRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVG 117
++ + + R+S +V SIT+ ++S LAF G
Sbjct: 354 QKTNAKDSVSQRLSTVYSKVAVSITITTISNVLAFYTG 391
>WB|WBGene00004221 [details] [associations]
symbol:ptr-6 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0018996 GO:GO:0040011 GO:GO:0040018
GO:GO:0008158 GeneTree:ENSGT00680000099845 EMBL:FO080943 PIR:T15830
RefSeq:NP_494986.2 ProteinModelPortal:Q09938 PaxDb:Q09938
EnsemblMetazoa:C54A12.1 GeneID:173898 KEGG:cel:CELE_C54A12.1
UCSC:C54A12.1 CTD:173898 WormBase:C54A12.1 eggNOG:NOG280798
HOGENOM:HOG000017068 InParanoid:Q09938 OMA:ILTAICS NextBio:881585
Uniprot:Q09938
Length = 982
Score = 145 (56.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 19 YVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNA 78
++ SK +L L GV+ +L++L +G G+ I + + PFLVL++GVD+M I V A
Sbjct: 334 WLRSKPMLALGGVLSSVLAILSGIGLLLWFGMFFAEITL-IAPFLVLSIGVDDMFIAVAA 392
Query: 79 VKRQPMEL------VLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXX 132
M+ V++ R+ A+ E +I + S ++ L+F G+ + A + F
Sbjct: 393 WHNTEMKYPGRSPKVMKKRMIEAMSESAVAIFITSFTDVLSFGAGTITDIIAVQGFCAMT 452
Query: 133 XXXXXXXXXXQVTAFVALIEVHA 155
Q+T F AL+ + A
Sbjct: 453 AACMFFTFLYQITFFAALMVISA 475
Score = 41 (19.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 28/145 (19%), Positives = 59/145 (40%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLE-QQIVLPRDSYLQGYFDNTTE 210
+ + P L W K+ + F+ + S+ +E GL+ +++L D ++ E
Sbjct: 572 DYYVPWLLNWKTKLFMFVTFIIYLGISVYGICVMEQGLDYDKLLLHSDPLVEA-LKREIE 630
Query: 211 YLRVGPPLYFVVKDY-NYS-SESRHTNQLC---------SISQCDSNSLLNEISRASSIP 259
G + +++ N + +ESR +L S+ ++ + E + S++
Sbjct: 631 LFHGGDQIEIAIQNCPNITIAESRDRIELVAQEFENISYSLGGKGTSFWMREYKKYSNLT 690
Query: 260 ELSYIAKPAASWLDDFLVWTSPEAF 284
SY+ SW+ W+ AF
Sbjct: 691 G-SYLNDNRESWIVGVYEWSQLFAF 714
>WB|WBGene00004216 [details] [associations]
symbol:ptr-1 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996
GO:GO:0040011 GO:GO:0040018 GO:GO:0045138 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080128 PIR:A89153
RefSeq:NP_505380.1 ProteinModelPortal:Q18129 STRING:Q18129
PaxDb:Q18129 EnsemblMetazoa:C24B5.3 GeneID:191746
KEGG:cel:CELE_C24B5.3 UCSC:C24B5.3 CTD:191746 WormBase:C24B5.3
eggNOG:NOG246851 HOGENOM:HOG000018323 InParanoid:Q18129 OMA:LNDHITM
NextBio:950192 Uniprot:Q18129
Length = 956
Score = 136 (52.9 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 32/112 (28%), Positives = 59/112 (52%)
Query: 19 YVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNA 78
+V SK L+ +G++ +++ + S G G I+ V PFL+L +G+D++ I+
Sbjct: 320 WVRSKPLVAAAGLMTPIMATVTSFGLILWCGFLYNAIV-NVSPFLILCIGIDDLFIMCAE 378
Query: 79 VKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSM 130
R + E RI L E +I++ SL++ FA+G + +P ++F M
Sbjct: 379 WHRTNPQHSPEKRIGKTLSEAAVAISITSLTDIATFAMGCYTTLPGVQMFCM 430
Score = 50 (22.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 14/74 (18%), Positives = 35/74 (47%)
Query: 152 EVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTE- 210
E+ P + ++ + ++L + +I I+ GL+ ++++ YL +++ E
Sbjct: 550 EIIGPFILQKSTQVCALLLYLVYISLAIGGCLNIKEGLDPKLLVRESFYLSKFYEIIDET 609
Query: 211 YLRVGPPLYFVVKD 224
+ R G + VV +
Sbjct: 610 FWREGLQMQVVVNN 623
>WB|WBGene00004234 [details] [associations]
symbol:ptr-20 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR000731 InterPro:IPR003392
Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021 GO:GO:0018996
GO:GO:0040011 GO:GO:0040018 GO:GO:0045138 GO:GO:0008158
EMBL:AL132949 GeneTree:ENSGT00680000099845 RefSeq:NP_497114.1
ProteinModelPortal:Q9NAB5 EnsemblMetazoa:Y53F4B.28 GeneID:175165
KEGG:cel:CELE_Y53F4B.28 UCSC:Y53F4B.28 CTD:175165
WormBase:Y53F4B.28 eggNOG:NOG294458 HOGENOM:HOG000016731
InParanoid:Q9NAB5 OMA:DMENLYL NextBio:887026 Uniprot:Q9NAB5
Length = 860
Score = 140 (54.3 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 32/124 (25%), Positives = 63/124 (50%)
Query: 30 GVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQPMELVLE 89
GV+ +++ + G IG + I+ V+PFLV+ +G+D+ +++ ++ LE
Sbjct: 282 GVLSPGMALWTTTGLLWGIGYPFSNILT-VVPFLVVTIGIDDAFLILAGWRQSTKGESLE 340
Query: 90 TRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVA 149
R+ ++ G S+T+ S+++ FA G F MP ++F + Q+T F A
Sbjct: 341 VRLGQSVAISGASVTVTSVTDVACFATGLFSNMPVVQLFCLYTTVALAIDFIYQMTFFTA 400
Query: 150 LIEV 153
L+ +
Sbjct: 401 LVGI 404
Score = 44 (20.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 149 ALIEVHAPILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYL 201
+++EV L K+ VV F+ + +AL + + + + + DS L
Sbjct: 455 SILEVFIDFLHTPVAKLAVVLAFIGHILICLALVSHVNTNFDMENLYLEDSPL 507
>WB|WBGene00004222 [details] [associations]
symbol:ptr-8 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:Z37092 HOGENOM:HOG000017328
PIR:T22186 RefSeq:NP_496343.1 ProteinModelPortal:Q20404
EnsemblMetazoa:F44F4.4 GeneID:174678 KEGG:cel:CELE_F44F4.4
UCSC:F44F4.4 CTD:174678 WormBase:F44F4.4 eggNOG:NOG288640
InParanoid:Q20404 OMA:IMSIAIM NextBio:885030 Uniprot:Q20404
Length = 890
Score = 137 (53.3 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 2 FAYISVALGDTPRFSSFYVSS------KVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLI 55
F +S+ T FS+ Y+ S KV L + I ++ ++G GV + I
Sbjct: 270 FVIMSIFCTVTTMFSAVYLYSQKATFNKVALSIIACINPFMACGTAMGILFFCGVTFSPI 329
Query: 56 IMEVIPFLVLAVGVDNMCILVNAVKR------QPMELVL-ETRISNALVEVGPSITLASL 108
M + PFLVLA+ VD+ ++++A R P++ + E + LVE GP+I++++
Sbjct: 330 -MCITPFLVLAISVDDSFLMLHAWNRLESWRTAPLDKPMREHMMGEVLVETGPAISISAF 388
Query: 109 SEFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVA 149
+ LAF +G+ P R+F Q T + A
Sbjct: 389 TNMLAFTIGAITSPPEIRIFCFGNAAAIFMDMFYQATFYTA 429
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 216 PPLYFVVKDY-NYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSY 263
P F + D+ Y S ++ I++ DS S ++I + PE S+
Sbjct: 566 PSTKFFLDDFVQYRSSFAEEIEM-DIAEDDSESEKSDIEQFLEWPEFSF 613
>WB|WBGene00004237 [details] [associations]
symbol:ptr-23 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
InterPro:IPR000731 InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156
GO:GO:0016021 GO:GO:0008340 GO:GO:0018996 GO:GO:0006897
GO:GO:0040011 GO:GO:0000003 GO:GO:0045138 GO:GO:0040025
GO:GO:0008158 EMBL:Z81511 GeneTree:ENSGT00680000099845 EMBL:Z82089
PIR:T21213 RefSeq:NP_493603.1 ProteinModelPortal:G5EE13
EnsemblMetazoa:ZK270.1 GeneID:173362 KEGG:cel:CELE_ZK270.1
CTD:173362 WormBase:ZK270.1 OMA:RMEINIA NextBio:879335
Uniprot:G5EE13
Length = 983
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 23 KVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVNAVKRQ 82
K++L + + +L+ ++ GV+ I+ VIPFLVL++GVD+ ++++ +R
Sbjct: 345 KIILAIMACLTPLLACATALALMFLCGVRFASILC-VIPFLVLSIGVDSSYLMIHEWQRV 403
Query: 83 PMELVLET---------RISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSMXXX 133
+ ET R+S + EVGP+I ++ L+ A AVGSF P +
Sbjct: 404 TKHM-RETPRKKDSVGHRMSEVMAEVGPAILISCLTNMFADAVGSFTSSPEITLLCTGNM 462
Query: 134 XXXXXXXXXQVTAFVALIEV 153
Q+T + L+ +
Sbjct: 463 LSMWFAFIYQMTFYAGLMSI 482
>WB|WBGene00004219 [details] [associations]
symbol:ptr-4 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
GO:GO:0010171 GO:GO:0040011 GO:GO:0040018 GO:GO:0000003
GO:GO:0045138 GO:GO:0043652 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080451 RefSeq:NP_509013.2
ProteinModelPortal:Q95YD0 STRING:Q95YD0 PaxDb:Q95YD0
EnsemblMetazoa:C45B2.7 GeneID:180876 KEGG:cel:CELE_C45B2.7
UCSC:C45B2.7 CTD:180876 WormBase:C45B2.7 eggNOG:NOG268725
HOGENOM:HOG000020423 InParanoid:Q95YD0 OMA:TIAPSSM NextBio:911372
Uniprot:Q95YD0
Length = 960
Score = 129 (50.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 38/139 (27%), Positives = 66/139 (47%)
Query: 15 FSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCI 74
+SS SK + GV V+ +++ + G F G K + +PFLVLAVGVD+ +
Sbjct: 362 YSSDRTKSKPIEMCVGVWCVIFALIITFGVFFFFGAKFNPVT-STMPFLVLAVGVDDDFL 420
Query: 75 LVNAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFI-PMPACRVFSMXXX 133
++ A + + R+ + + G SIT+ S + F F +G F+ PA F +
Sbjct: 421 MMAAWRECDRKHSPAIRLGFVMADAGASITVTSFTNFFCFFLGWFMCSTPAVADFCIITA 480
Query: 134 XXXXXXXXXQVTAFVALIE 152
Q+T + A+++
Sbjct: 481 AGVFFDYLMQITFYAAILK 499
>WB|WBGene00004227 [details] [associations]
symbol:ptr-13 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:Z47074 PIR:T23399
RefSeq:NP_496392.2 UniGene:Cel.14668 ProteinModelPortal:Q09934
PaxDb:Q09934 EnsemblMetazoa:K07C10.1 GeneID:191748
KEGG:cel:CELE_K07C10.1 UCSC:K07C10.1 CTD:191748 WormBase:K07C10.1
eggNOG:NOG321637 HOGENOM:HOG000016813 InParanoid:Q09934 OMA:NSIMCIT
NextBio:950200 Uniprot:Q09934
Length = 851
Score = 124 (48.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 15 FSSFYVSSKVLLGLSGVILVMLSVLGSVGFFSAIG-VKSTL-IIMEVIPFLVLAVGVDNM 72
F+ + SK +L ++G I L+ G+ F+ +G V IM + PFL+L +GVD+
Sbjct: 282 FTELTIFSKCML-IAGAIGSPLAATGAC--FAILGWVGHPFNSIMCITPFLILGIGVDDA 338
Query: 73 CILVNAVKRQPME----LVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVF 128
+L+N +R+ + E +++ + E+ PS+ + SL+ +AF VG P P F
Sbjct: 339 FLLLNCWRREEGKDKSAKQAENQLARVIREISPSMAITSLTNTMAFGVGFLAPTPQMSSF 398
Query: 129 SM 130
+
Sbjct: 399 CL 400
Score = 45 (20.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 157 ILGLWGVKMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGP 216
+L + G +V++ F FT + ++ ++E + P DS L + T
Sbjct: 467 LLSVPGRVLVIILYFSIFTASYFGVA-KMEKTFDPSKTFPSDSKLVDSLASFTSIQVEYS 525
Query: 217 PLYFV--VKDYNYSSESRHTNQL 237
PL F+ V D ++ + N++
Sbjct: 526 PLNFLSSVPDLKNDTDVANFNEM 548
>WB|WBGene00004235 [details] [associations]
symbol:ptr-21 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
EMBL:FO081483 GeneTree:ENSGT00680000099845 RefSeq:NP_490751.1
ProteinModelPortal:Q9N2Z6 PaxDb:Q9N2Z6 EnsemblMetazoa:Y65B4BR.3
GeneID:191752 KEGG:cel:CELE_Y65B4BR.3 UCSC:Y65B4BR.3 CTD:191752
WormBase:Y65B4BR.3 eggNOG:NOG295827 HOGENOM:HOG000017683
InParanoid:Q9N2Z6 OMA:FESMEKC NextBio:950216 Uniprot:Q9N2Z6
Length = 909
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 32/114 (28%), Positives = 62/114 (54%)
Query: 19 YVSSKV-LLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGV-DNMCILV 76
Y S ++ L+ L+ +++ +L++L + G + +G ++ +M ++PFL+ +GV D L
Sbjct: 318 YFSWRIGLIALACLLVPILAILTAFGINNMLGNRTNSPMM-IMPFLINGIGVNDAFLTLQ 376
Query: 77 NAVKRQPMELVLETRISNALVEVGPSITLASLSEFLAFAVGSFIPMPACRVFSM 130
N ++ P +L R+ L E GPSIT +L+ + F +G P +F +
Sbjct: 377 NWLQHSP-DLPSGKRLGYMLAEAGPSITTTTLTNVIVFLIGWMNPTEEMSIFCL 429
>WB|WBGene00004226 [details] [associations]
symbol:ptr-12 species:6239 "Caenorhabditis elegans"
[GO:0008158 "hedgehog receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] InterPro:IPR000731
InterPro:IPR003392 Pfam:PF02460 PROSITE:PS50156 GO:GO:0016021
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0008158
GeneTree:ENSGT00680000099845 EMBL:FO080962 RefSeq:NP_001021559.2
UniGene:Cel.34174 ProteinModelPortal:H2KZH1 EnsemblMetazoa:K07A3.2a
GeneID:171816 KEGG:cel:CELE_K07A3.2 CTD:171816 WormBase:K07A3.2a
OMA:GITIMNI Uniprot:H2KZH1
Length = 901
Score = 117 (46.2 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 2 FAYISVALGDTPRFSSFYVSS----KVLLGLSGVILVMLSVLGSVGFFSAIGVKSTLIIM 57
F +++ T FS+ Y+ K L ++ I ++ ++G GV+ I+
Sbjct: 288 FVIMAIVSSVTTFFSAVYMQQVSIHKFSLAIAACICPFMACGTALGALFFCGVRFGSILC 347
Query: 58 EVIPFLVLAVGVDNMCILVNAVKRQPMEL----VLE----TRISNALVEVGPSITLASLS 109
V PFLVLA+GVD+ +++++ +R E V +R+S LV+ GP+I +++L+
Sbjct: 348 -VTPFLVLAIGVDDAYLMIHSWQRVTAERRKHPVANDSPGSRLSEVLVDTGPAILISALT 406
Query: 110 EFLAFAVGSFIPMPACRVFSMXXXXXXXXXXXXQVTAFVALI 151
A G F P + Q+T + A++
Sbjct: 407 NIFADVAGCFTSSPEISLLGYGNMACIFCDFLYQITFYSAIM 448
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 164 KMVVVSVFLAFTVASIALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYL 212
++ VV V++AF V SI T + L + + DS L+ D +Y+
Sbjct: 512 QIFVVLVWIAFLVVSIYGITIMNINLSPRKLFMEDSSLREMDDLRVKYV 560
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 387 0.00093 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 102
No. of states in DFA: 619 (66 KB)
Total size of DFA: 238 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.39u 0.09s 29.48t Elapsed: 00:00:01
Total cpu time: 29.41u 0.10s 29.51t Elapsed: 00:00:01
Start: Thu May 9 15:11:19 2013 End: Thu May 9 15:11:20 2013
WARNINGS ISSUED: 1