Your job contains 1 sequence.
>014916
MGDAESALPPSKKRAAGRELSRDNPGLDDEEDSSELESGTFKKATDEVLATRRIVKVRRN
QTASTPSSNPFAGIRLVPSTEPSATVTPATTEPTKTVSPAATELLESSENKVSVDANNDA
GKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPASADAAGKKSS
DDKENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDSSQLSSFGQLSSTQNAFTGLAGT
GFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQEV
VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLI
LNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAVAF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014916
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018204 - symbol:AT1G52380 species:3702 "Arabi... 838 1.2e-83 1
TAIR|locus:2093372 - symbol:AT3G15970 species:3702 "Arabi... 657 1.8e-64 1
DICTYBASE|DDB_G0278271 - symbol:DDB_G0278271 "Ran-binding... 222 2.8e-16 1
FB|FBgn0039110 - symbol:RanBP3 "Ran binding protein 3" sp... 197 4.9e-13 1
POMBASE|SPCC18B5.07c - symbol:nup61 "nucleoporin Nup61" s... 180 1.8e-12 2
ASPGD|ASPL0000004916 - symbol:AN10754 species:162425 "Eme... 190 3.9e-12 1
UNIPROTKB|F5H4C2 - symbol:RANBP3 "Ran-binding protein 3" ... 180 4.2e-11 1
UNIPROTKB|Q9H6Z4 - symbol:RANBP3 "Ran-binding protein 3" ... 180 7.2e-11 2
UNIPROTKB|F1PS48 - symbol:RANBP3 "Uncharacterized protein... 179 8.7e-11 1
ZFIN|ZDB-GENE-040426-1627 - symbol:zgc:66385 "zgc:66385" ... 177 1.3e-10 1
SGD|S000002409 - symbol:YRB1 "Ran GTPase binding protein"... 143 3.4e-10 2
FB|FBgn0039302 - symbol:Nup358 "Nucleoporin 358kD" specie... 181 5.4e-10 2
UNIPROTKB|B7Z7F3 - symbol:RANBP3 "Ran-binding protein 3" ... 165 5.9e-10 2
UNIPROTKB|F1PS47 - symbol:RANBP3 "Uncharacterized protein... 169 9.2e-10 1
POMBASE|SPBC365.13c - symbol:hba1 "Ran GTPase binding pro... 154 1.5e-09 2
UNIPROTKB|F1SBU0 - symbol:RANBP3 "Uncharacterized protein... 161 1.9e-09 1
ZFIN|ZDB-GENE-040426-1132 - symbol:ranbp3 "RAN binding pr... 166 2.2e-09 1
UNIPROTKB|Q24K04 - symbol:RANBP3 "Uncharacterized protein... 164 3.7e-09 1
SGD|S000001325 - symbol:YRB2 "Protein of unknown function... 160 3.9e-09 1
MGI|MGI:1919060 - symbol:Ranbp3 "RAN binding protein 3" s... 163 5.2e-09 2
UNIPROTKB|F1NJ42 - symbol:RANBP3 "Uncharacterized protein... 162 6.2e-09 1
UNIPROTKB|F1NA05 - symbol:LOC770700 "Uncharacterized prot... 160 7.6e-09 1
UNIPROTKB|G4N530 - symbol:MGG_05203 "Ran-specific GTPase-... 140 2.7e-08 2
POMBASE|SPBC1773.07c - symbol:sbp1 "Ran GTPase binding pr... 140 2.8e-08 2
GENEDB_PFALCIPARUM|PFD0950w - symbol:PFD0950w "ran bindin... 149 4.4e-08 1
UNIPROTKB|Q76NN6 - symbol:PFD0950w "Ran binding protein 1... 149 4.4e-08 1
CGD|CAL0005670 - symbol:YRB1 species:5476 "Candida albica... 128 6.0e-08 2
UNIPROTKB|Q5AAL2 - symbol:YRB1 "Putative uncharacterized ... 128 6.0e-08 2
RGD|1560047 - symbol:Ranbp2 "RAN binding protein 2" speci... 161 7.7e-08 1
UNIPROTKB|P48820 - symbol:RANBP2 "E3 SUMO-protein ligase ... 156 8.4e-08 1
MGI|MGI:894323 - symbol:Ranbp2 "RAN binding protein 2" sp... 157 2.1e-07 1
ASPGD|ASPL0000058693 - symbol:AN0084 species:162425 "Emer... 140 2.9e-07 1
UNIPROTKB|E7ES93 - symbol:RGPD1 "RANBP2-like and GRIP dom... 148 3.2e-07 1
ZFIN|ZDB-GENE-081104-93 - symbol:si:ch1073-55a19.2 "si:ch... 147 3.8e-07 1
UNIPROTKB|Q86VV4 - symbol:RANBP3L "Ran-binding protein 3-... 145 4.2e-07 1
ZFIN|ZDB-GENE-030131-1689 - symbol:nup50 "nucleoporin 50"... 125 4.7e-07 2
UNIPROTKB|K7EIJ4 - symbol:RANBP3 "Ran-binding protein 3" ... 122 5.1e-07 1
UNIPROTKB|Q7Z3J3 - symbol:RGPD4 "RanBP2-like and GRIP dom... 155 5.8e-07 2
UNIPROTKB|J3KNY6 - symbol:RGPD4 "RanBP2-like and GRIP dom... 155 5.8e-07 2
UNIPROTKB|F1MXS1 - symbol:RANBP2 "Putative peptidyl-proly... 156 7.1e-07 2
UNIPROTKB|F1SNB4 - symbol:RANBP3L "Uncharacterized protei... 142 7.9e-07 1
UNIPROTKB|F1SNB5 - symbol:RANBP3L "Uncharacterized protei... 142 8.7e-07 1
UNIPROTKB|F1SNB3 - symbol:RANBP3L "Uncharacterized protei... 142 8.8e-07 1
ASPGD|ASPL0000030982 - symbol:nup2 species:162425 "Emeric... 138 1.0e-06 3
UNIPROTKB|J9P0I5 - symbol:RANBP3L "Uncharacterized protei... 138 1.1e-06 2
UNIPROTKB|F1NGF7 - symbol:RANBP3L "Uncharacterized protei... 141 1.1e-06 1
UNIPROTKB|E1BCV6 - symbol:RANBP3L "Uncharacterized protei... 141 1.2e-06 1
UNIPROTKB|G3MX58 - symbol:RANBP3L "Uncharacterized protei... 141 1.2e-06 1
WB|WBGene00003795 - symbol:npp-9 species:6239 "Caenorhabd... 144 1.4e-06 1
UNIPROTKB|Q86G90 - symbol:npp-9 "Protein NPP-9, isoform b... 144 1.4e-06 1
UNIPROTKB|Q5F473 - symbol:NUP50 "Uncharacterized protein"... 107 1.5e-06 3
UNIPROTKB|F1SU29 - symbol:RANBP2 "Uncharacterized protein... 146 2.0e-06 2
UNIPROTKB|E9PGT0 - symbol:RANBP2 "Putative peptidyl-proly... 150 2.2e-06 2
UNIPROTKB|F1PS89 - symbol:RANBP3L "Uncharacterized protei... 138 2.2e-06 1
UNIPROTKB|F1PS90 - symbol:RANBP3L "Uncharacterized protei... 138 2.7e-06 1
MGI|MGI:2444654 - symbol:Ranbp3l "RAN binding protein 3-l... 138 2.7e-06 1
UNIPROTKB|P49792 - symbol:RANBP2 "E3 SUMO-protein ligase ... 150 4.7e-06 2
UNIPROTKB|Q6AYL1 - symbol:Npap60 "Uncharacterized protein... 129 5.0e-06 2
UNIPROTKB|J3KQ37 - symbol:RGPD8 "RANBP2-like and GRIP dom... 145 6.2e-06 2
UNIPROTKB|P0DJD0 - symbol:RGPD1 "RANBP2-like and GRIP dom... 148 6.9e-06 2
UNIPROTKB|F8VYC4 - symbol:RGPD1 "RANBP2-like and GRIP dom... 148 7.0e-06 2
UNIPROTKB|Q99666 - symbol:RGPD5 "RANBP2-like and GRIP dom... 145 7.4e-06 2
UNIPROTKB|O14715 - symbol:RGPD8 "RANBP2-like and GRIP dom... 145 7.4e-06 2
UNIPROTKB|A6NKT7 - symbol:RGPD3 "RanBP2-like and GRIP dom... 144 7.5e-06 2
UNIPROTKB|J3KNE0 - symbol:RGPD3 "RanBP2-like and GRIP dom... 144 7.5e-06 2
UNIPROTKB|E2QT37 - symbol:NUP50 "Uncharacterized protein"... 114 8.3e-06 2
DICTYBASE|DDB_G0291444 - symbol:DDB_G0291444 species:4468... 133 8.5e-06 1
UNIPROTKB|J3QTV4 - symbol:RGPD2 "RANBP2-like and GRIP dom... 147 8.9e-06 2
UNIPROTKB|P0DJD1 - symbol:RGPD2 "RANBP2-like and GRIP dom... 147 9.0e-06 2
TAIR|locus:2178798 - symbol:RANBP1 "RAN binding protein 1... 125 1.2e-05 1
UNIPROTKB|F1MZD9 - symbol:NUP50 "Uncharacterized protein"... 109 1.7e-05 3
RGD|3191 - symbol:Npap60 "nuclear pore associated protein... 115 1.7e-05 2
UNIPROTKB|G3V7R1 - symbol:Npap60 "Protein Npap60" species... 115 1.7e-05 2
GENEDB_PFALCIPARUM|PFD0207c - symbol:PFD0207c "hypothetic... 131 2.4e-05 1
UNIPROTKB|Q8I1Y6 - symbol:PFD0207c "Putative uncharacteri... 131 2.4e-05 1
UNIPROTKB|F1PA81 - symbol:F1PA81 "Uncharacterized protein... 149 2.4e-05 2
RGD|1307559 - symbol:Ranbp3l "RAN binding protein 3-like"... 130 5.0e-05 2
TAIR|locus:2060837 - symbol:AT2G30060 "AT2G30060" species... 119 5.9e-05 1
SGD|S000001800 - symbol:SRP40 "Nucleolar serine-rich prot... 123 9.4e-05 1
DICTYBASE|DDB_G0287391 - symbol:ranbp1 "Ran binding prote... 108 0.00014 2
UNIPROTKB|Q9UKX7 - symbol:NUP50 "Nuclear pore complex pro... 105 0.00014 2
POMBASE|SPBC1711.05 - symbol:SPBC1711.05 "nucleocytoplasm... 120 0.00024 1
TAIR|locus:2007467 - symbol:SIRANBP "AT1G07140" species:3... 114 0.00028 1
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 119 0.00039 1
DICTYBASE|DDB_G0287399 - symbol:DDB_G0287399 species:4468... 118 0.00045 1
DICTYBASE|DDB_G0271670 - symbol:DDB_G0271670 species:4468... 115 0.00064 1
WB|WBGene00004306 - symbol:ran-5 species:6239 "Caenorhabd... 114 0.00070 1
UNIPROTKB|Q5JSK9 - symbol:HMGN5 "High mobility group nucl... 109 0.00070 1
CGD|CAL0000295 - symbol:IFF8 species:5476 "Candida albica... 118 0.00077 1
UNIPROTKB|Q59XB0 - symbol:IFF8 "Putative uncharacterized ... 118 0.00077 1
SGD|S000004327 - symbol:NUP2 "Nucleoporin involved in nuc... 118 0.00078 1
ZFIN|ZDB-GENE-091204-441 - symbol:si:zfos-979f1.2 "si:zfo... 116 0.00091 2
>TAIR|locus:2018204 [details] [associations]
symbol:AT1G52380 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638
Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 EMBL:CP002684
GO:GO:0005829 GO:GO:0005634 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005643 EMBL:AC037424 GO:GO:0046907 KO:K15304 EMBL:AY037180
EMBL:AY059149 IPI:IPI00547666 PIR:A96564 RefSeq:NP_564606.1
UniGene:At.20601 ProteinModelPortal:Q9C829 SMR:Q9C829 IntAct:Q9C829
STRING:Q9C829 PRIDE:Q9C829 EnsemblPlants:AT1G52380.1 GeneID:841668
KEGG:ath:AT1G52380 TAIR:At1g52380 HOGENOM:HOG000241369
InParanoid:Q9C829 OMA:YPDMKLT PhylomeDB:Q9C829
ProtClustDB:CLSN2688429 Genevestigator:Q9C829 Uniprot:Q9C829
Length = 440
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 192/424 (45%), Positives = 255/424 (60%)
Query: 1 MGDAESALPPSKKRAAGRELSRDNPGXXXXXXXXXXXXGTFKKATDEVLATRRIVKVRRN 60
MGD+E+ PSKKR A ++LSRDNPG GTFKKA+DEVLA+RRIV+V+R
Sbjct: 1 MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60
Query: 61 QTASTP--SSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVSPAATELLESSENKVSVDANN 118
+ ++ P +SNPFAGI+L T +P A L +E +V +N
Sbjct: 61 EPSAAPVAASNPFAGIQLVPTTAPASTPVG-------TNAPLAESKLAPAE---AVVEDN 110
Query: 119 DAGKEAEKGDGEDNKQSESKIDEPVAV-EAASSEPEKGEDESSKQTE---SKNEPXXXXX 174
+ E+GD D+K K+D AV E +K ++ K + + E
Sbjct: 111 QKASDIEEGDEVDSK----KVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVS 166
Query: 175 XXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEK----ETSHETTDXXXXXXXXXXXXT 230
G ++++ K +G D+ E ++++ E + + D
Sbjct: 167 CDTNVCNNAVEGTDQTDFPLEKDSGGDQAEKKEKEGNGIEEADKNGDNGAFSSFQQHSSN 226
Query: 231 QNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE 290
+NAFTGLA T S S+F+FG + +DGS S FG ++ +SS+F +SI KSE
Sbjct: 227 KNAFTGLASTEASGSSFSFGLVSQDGSTGTG-SLFGFGLPSSNSSSIFGATGSSIIKKSE 285
Query: 291 GTTFPSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLL 350
G+ FP QEV ETGEENEKV FSADS++FE+LDG WKERGKGELKVNVS+N G+ARL+
Sbjct: 286 GSGFPPKQEVSTETGEENEKVAFSADSIMFEYLDGGWKERGKGELKVNVSSN-DGKARLV 344
Query: 351 MRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
MRA+GNYRLILNASLYP+MKL NMDKKGITFAC+NS +EGK GLSTFALKF+D +IVEEF
Sbjct: 345 MRAKGNYRLILNASLYPEMKLANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEF 404
Query: 411 QTAV 414
+ A+
Sbjct: 405 RVAI 408
>TAIR|locus:2093372 [details] [associations]
symbol:AT3G15970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638
Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 GO:GO:0005829
EMBL:CP002686 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643
EMBL:AB012247 GO:GO:0046907 KO:K15304 ProtClustDB:CLSN2688429
IPI:IPI00538170 RefSeq:NP_566532.1 UniGene:At.38962
ProteinModelPortal:Q9LW88 SMR:Q9LW88 STRING:Q9LW88 PRIDE:Q9LW88
EnsemblPlants:AT3G15970.1 GeneID:820841 KEGG:ath:AT3G15970
TAIR:At3g15970 InParanoid:Q9LW88 OMA:MFEYLEG PhylomeDB:Q9LW88
Genevestigator:Q9LW88 Uniprot:Q9LW88
Length = 465
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 150/319 (47%), Positives = 197/319 (61%)
Query: 109 ENKVSVDANNDAGKEAEKGDGEDNKQSESKID--EPVAVEAASSEPEKGEDESSKQTESK 166
++K DA + GK+ +GD E + +++ ID E EA +S E G + + E K
Sbjct: 120 DSKEKSDAIDAVGKQETQGD-EISAKTKDIIDGGEKEMSEAVNSV-EGGGAVNKNEDEIK 177
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNG--KTAGVDKPENEDEKETSHETT----DXXX 220
N + E + K G ++ E E ++ +E T D
Sbjct: 178 TTMVTEVAAGEETVKDDNNNSNTVEGSDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGA 237
Query: 221 XXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSA-SNSTSASV-FGQVNNGNSSLF 278
++NAFTGLA TGFS S+F+FG +P++GS S S +S FGQ NNGNSSLF
Sbjct: 238 LSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTGSGSEQSSFSFGQANNGNSSLF 297
Query: 279 NTP-ATSIASKSEGTT--FPSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGEL 335
ATSI +KS TT FPS Q+V VETGEENEK F+ADSV+FE+L+G WKERGKGEL
Sbjct: 298 GASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFTADSVMFEYLEGGWKERGKGEL 357
Query: 336 KVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLS 395
KVN+ST +ARL+MR++GNYRL LNASLYP+MKL MDKKGITFAC+NS ++ K GLS
Sbjct: 358 KVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGLS 417
Query: 396 TFALKFRDASIVEEFQTAV 414
T ALKF+D ++VEEF+ +
Sbjct: 418 TLALKFKDPTVVEEFRAVI 436
Score = 214 (80.4 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 74/266 (27%), Positives = 121/266 (45%)
Query: 1 MGDAESALPPSKKRAAGRELSRDNPGXXXXXXXXXXX-XGTFKKATDEVLATRRIVKVRR 59
MGD+++A+P S+KR A +ELSRDNPG GTF A+ EVLA+RRI++VRR
Sbjct: 1 MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60
Query: 60 NQTAST--PSSNPFAGIRL------XXXXXXXXXXXXXXXXXXKTVSPAATELLESSE-- 109
++T P+SNPF GIRL +T++ ++ + ++
Sbjct: 61 TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDGD 120
Query: 110 NKVSVDANNDAGKEAEKGDGEDNKQSESKID--EPVAVEAASSEPEKGEDESSKQTESKN 167
+K DA + GK+ +GD E + +++ ID E EA +S E G + + E K
Sbjct: 121 SKEKSDAIDAVGKQETQGD-EISAKTKDIIDGGEKEMSEAVNSV-EGGGAVNKNEDEIKT 178
Query: 168 EPXXXXXXXXXXXXXXENGAEKSEVDNG--KTAGVDKPENEDEKETSHETTDXXXXXXXX 225
N + E + K G ++ E E ++ +E T+
Sbjct: 179 TMVTEVAAGEETVKDDNNNSNTVEGSDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGAL 238
Query: 226 XXXXTQNAFTGLAGTGFSTSTFAFGS 251
Q++ + A TG +++ F+ S
Sbjct: 239 SSFH-QHSSSKNAFTGLASTGFSASS 263
>DICTYBASE|DDB_G0278271 [details] [associations]
symbol:DDB_G0278271 "Ran-binding protein 3"
species:44689 "Dictyostelium discoideum" [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 dictyBase:DDB_G0278271
Gene3D:2.30.29.30 InterPro:IPR011993 EMBL:AAFI02000023
GO:GO:0005622 GO:GO:0046907 KO:K15304 eggNOG:COG5171 OMA:GEESEEC
RefSeq:XP_642253.1 ProteinModelPortal:Q54YE9
EnsemblProtists:DDB0205337 GeneID:8621462 KEGG:ddi:DDB_G0278271
InParanoid:Q54YE9 ProtClustDB:CLSZ2846840 Uniprot:Q54YE9
Length = 372
Score = 222 (83.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 87/329 (26%), Positives = 144/329 (43%)
Query: 103 ELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQ 162
EL E+S ++ K+ K D + + + E +E K ++
Sbjct: 52 ELEETSTTTEETSTEDNHTKKKLKVDPTPSVEDNNN----KTTENKETEENKEPTTTTTT 107
Query: 163 TESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKE-TSHETTDXXXX 221
TE K E + EK + K GV++ + E+EK+ TS +
Sbjct: 108 TEEKKEEKKEEENKETTTTTTD---EKKD---DKKEGVEEEKKEEEKKPTSIFGSGSSIF 161
Query: 222 XXXXXXXXTQNAFTGLAGTGFSTSTFAFG-SIPKDGSASNSTSASVFGQVNNGNSSLFNT 280
+A + STS+F+FG + S+SN+T S+FG NN N++ N
Sbjct: 162 GSGFPSTGFGSASNTFSFNLNSTSSFSFGFNKSSTDSSSNTTGTSLFGNNNNNNNNNNNN 221
Query: 281 PATSIASKSEG------------TTFPSM---QEVVVETGEENEKVVFSADSVLFEFLDG 325
+ KSE TTF + QEV ++TGEE+E + S L+ D
Sbjct: 222 TKNDDSEKSESSVSNNGCDESDNTTFEPIIQAQEVELKTGEEDETTLCSTKGKLYILQDK 281
Query: 326 SWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACIN 385
+KERG G ++VN ++R++M A G+ + ILN +++P MK+T+ ++K +TF
Sbjct: 282 QYKERGVGTIRVNKDLEE--KSRIIMNADGSKKNILNVNIFPKMKVTSPNEKTLTFIAFE 339
Query: 386 SATEGKSGLSTFALKFRDASIVEEFQTAV 414
+ K + TF L + I + F T +
Sbjct: 340 ---DDK--ICTFVLIAKPEEI-KNFSTVI 362
>FB|FBgn0039110 [details] [associations]
symbol:RanBP3 "Ran binding protein 3" species:7227
"Drosophila melanogaster" [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IDA] [GO:0051168 "nuclear
export" evidence=IMP] [GO:0006611 "protein export from nucleus"
evidence=IMP] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:AE014297 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0030178 GO:GO:0006611 KO:K15304 CTD:8498
eggNOG:NOG304969 GeneTree:ENSGT00530000063644 EMBL:AY069314
RefSeq:NP_651178.1 UniGene:Dm.1298 SMR:Q9VCI7 IntAct:Q9VCI7
MINT:MINT-861214 STRING:Q9VCI7 EnsemblMetazoa:FBtr0084468
GeneID:42804 KEGG:dme:Dmel_CG10225 UCSC:CG10225-RA
FlyBase:FBgn0039110 InParanoid:Q9VCI7 OMA:NWEERGR OrthoDB:EOG4N5TCP
GenomeRNAi:42804 NextBio:830655 Uniprot:Q9VCI7
Length = 449
Score = 197 (74.4 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 61/294 (20%), Positives = 123/294 (41%)
Query: 104 LLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQT 163
+L +S + + AG+++ + ++S+ D+ V S+ E D+
Sbjct: 34 VLANSSGSNNSSTSPSAGEDSALLNNPFLRESKDDDDDEEVVATGSAAAESTGDKEDDDV 93
Query: 164 ESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEK---ETSHETTDXXX 220
+ + +P A K+ + N +++G +N E+ + + T
Sbjct: 94 DERPDPLTKLRSNGIERSSMF-AAAKNNMPNVQSSGFVFGQNVHERVVAPNAEQVTAEPD 152
Query: 221 XXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTS-----ASVFGQVNNGNS 275
Q A + S++ F S+ ++ + + TS +S+ +N
Sbjct: 153 ADTAASSVSAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAASSSICSSSSNNKE 212
Query: 276 SLFNTPATSIASKSEGTTFPSM--QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKG 333
S T +A + E + +EV TGEE+E + LF FL+ +W+ERG+G
Sbjct: 213 SAEAKSLTDVAREYEESRAQKRKYEEVETFTGEEDEINIIDVSCKLFAFLNSNWEERGRG 272
Query: 334 ELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSA 387
L++N + + G +R++ R GN RL+LN ++ M +K + I+++
Sbjct: 273 SLRLNDAKDLRGDSRVVFRTSGNLRLLLNTKVWAAMVAERASQKSLRLTAIDNS 326
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 57/268 (21%), Positives = 104/268 (38%)
Query: 128 DGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGA 187
+ +D+ E + A AA S +K +D+ ++ + + +N
Sbjct: 64 ESKDDDDDEEVVATGSA--AAESTGDKEDDDVDERPDPLTKLRSNGIERSSMFAAAKNNM 121
Query: 188 EKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTF 247
+ +G G + E T + + A + A T S
Sbjct: 122 PNVQ-SSGFVFGQNVHERVVAPNAEQVTAEPDADTAASSVSAQEAASSSTAATSSSAPLL 180
Query: 248 AFGSIPKDGSASNST----SASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSM--QEVV 301
I + ++ S+S+ +N S T +A + E + +EV
Sbjct: 181 FSSVIQNAAQTTETSEAAASSSICSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVE 240
Query: 302 VETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLIL 361
TGEE+E + LF FL+ +W+ERG+G L++N + + G +R++ R GN RL+L
Sbjct: 241 TFTGEEDEINIIDVSCKLFAFLNSNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLL 300
Query: 362 NASLYPDM----------KLTNMDKKGI 379
N ++ M +LT +D G+
Sbjct: 301 NTKVWAAMVAERASQKSLRLTAIDNSGV 328
>POMBASE|SPCC18B5.07c [details] [associations]
symbol:nup61 "nucleoporin Nup61" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0006913 "nucleocytoplasmic
transport" evidence=TAS] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 PomBase:SPCC18B5.07c GO:GO:0007094 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0006913
GO:GO:0051028 OrthoDB:EOG4ZSDCT EMBL:AB027958 PIR:T41200
RefSeq:NP_587937.2 STRING:Q9USL4 PRIDE:Q9USL4
EnsemblFungi:SPCC18B5.07c.1 GeneID:2539348 eggNOG:NOG303174
NextBio:20800513 Uniprot:Q9USL4
Length = 549
Score = 180 (68.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 73/288 (25%), Positives = 122/288 (42%)
Query: 133 KQSESKIDEPV---AVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEK 189
+ ESK PV + AS++ K ++ + +SK+E EN E
Sbjct: 260 ENEESKPLTPVFSFSTTMASADASKETKQTHETKDSKSEESKPSNNEKS-----ENAVEP 314
Query: 190 SEVDNGKTAGV-DKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTST-- 246
++ + + DKP D E T+ + G F T+T
Sbjct: 315 AKGNTMSFSWTPDKPIKFDTPEKKFTFTNPLSSKKLPASSDVKPPSAAAVGFSFGTTTNP 374
Query: 247 FAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQEVVVE--- 303
F+F + PK ++ST ASV + + S N + K G + +V
Sbjct: 375 FSFAA-PKSSFPTSSTPASVGAEKSEETS---NGNKSEQEEKENGNDETRSNDSLVSGKG 430
Query: 304 TGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLIL 361
GEENE VF + ++ F S+ + G G LK+NV + TG AR+L R G+ +L+L
Sbjct: 431 KGEENEDSVFETRAKIYRFDATSKSYSDIGIGPLKINVDRD-TGSARILARVEGSGKLLL 489
Query: 362 NASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEE 409
N L D + + KK + ++T+GKS + + ++ ++ S E+
Sbjct: 490 NVRLCQDFEYSLAGKKDVKVPA--ASTDGKS-IEMYLIRVKEPSTAEK 534
Score = 56 (24.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 32/139 (23%), Positives = 52/139 (37%)
Query: 42 KKATDEVLATRRIVKV--RRNQTASTPSSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVS- 98
K+A+ +V+ATR+I K R+ T+ S FA + T +
Sbjct: 29 KEASADVMATRKIAKPKSRKRPTSGVSSPGIFANLAAKPVSLPASTTQFTFGKPAVTANN 88
Query: 99 PAATELLESSENKVSVDA------NNDAGKEAEKGD-------GEDNKQSESKIDEPVAV 145
+ L + NK +DA NN G + D + K +E + V
Sbjct: 89 DSDIHLKKRGLNKSFIDAVIKSVDNNPFGNLSPLFDEYRQHFSSIEKKPAEEQPTSNAVV 148
Query: 146 EAASSEPEKGEDESSKQTE 164
+ + +K +D SS TE
Sbjct: 149 SEVNPQQQKSQDSSSFVTE 167
>ASPGD|ASPL0000004916 [details] [associations]
symbol:AN10754 species:162425 "Emericella nidulans"
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
EMBL:BN001301 GO:GO:0046907 ProteinModelPortal:C8V3J6
EnsemblFungi:CADANIAT00007105 HOGENOM:HOG000163580 OMA:AFAGSEQ
Uniprot:C8V3J6
Length = 493
Score = 190 (71.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 82/296 (27%), Positives = 114/296 (38%)
Query: 100 AATELLESSENKVSVD---ANNDAGKEAEKGDGED--NKQSESKIDEPVAVEAASSEPEK 154
A E+ +SSEN+ S + A A E EK D ++ + + P A ++ S
Sbjct: 152 AKAEVKDSSENRESAEKTAATATAEGEPEKKRHRDVLGEREPAPLPSPFANTSSVSPFGS 211
Query: 155 GEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHE 214
SSKQ E +P G+E+S + G P S
Sbjct: 212 IAASSSKQAEDA-KPATSPAAFASSSLAAFAGSEQSPFGS---LGASTPSVFKSSTESVP 267
Query: 215 TTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGN 274
+ F GL G GFS + FG+ ++ A+ G G
Sbjct: 268 AGSDKPAATGFASAAKSSGFAGLGG-GFSGFSGGFGAAAASTGGGLTSFAAPGGSALLGT 326
Query: 275 SSL--FNTPATSIASKS---EGTTFPS----------MQEVVVETGEENEKVVFSADSVL 319
SS F A S EG T P+ E +ETGEE EK F+ + L
Sbjct: 327 SSAKPFGAEADSDEGDDKDDEGETGPAEFEQDKTDERFYERQIETGEEQEKTYFTCKAKL 386
Query: 320 FEFLDGSWKERGKGELKVNVSTNATGR----ARLLMRARGNYRLILNASLYPDMKL 371
F F + W+ERG G KVNV AR++MRA G R++LN L+ MK+
Sbjct: 387 FHFSNKEWRERGLGTFKVNVKVTDDVEDKKGARMIMRADGVGRVMLNTPLFKGMKV 442
>UNIPROTKB|F5H4C2 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046907 EMBL:AC004602 EMBL:AC093050 EMBL:AC005784
HGNC:HGNC:9850 ChiTaRS:RANBP3 IPI:IPI01010773
ProteinModelPortal:F5H4C2 SMR:F5H4C2 Ensembl:ENST00000541471
UCSC:uc010xix.2 ArrayExpress:F5H4C2 Bgee:F5H4C2 Uniprot:F5H4C2
Length = 439
Score = 180 (68.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 75/299 (25%), Positives = 121/299 (40%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTES- 165
S N VS+ A+ A D + DE A+E EP+K E ++ + E+
Sbjct: 64 SGTNGVSLPADCTGAVPAASPDTAAWRSPSEAADEVCALE--EKEPQKNESSNASEEEAC 121
Query: 166 -KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSH--ETTDXXXXX 222
K +P VD P + T++ +
Sbjct: 122 EKKDPATQQAFVFGQNLRDRVKLINESVDEADMENAGHPSADTPTATNYFLQYISSSLEN 181
Query: 223 XXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTP- 281
+ N F + G S + + + S +N +A+ + + +SS TP
Sbjct: 182 STNSADASSNKF--VFGQNMSERVLSPPKLNEVSSDANRENAAA--ESGSESSSQEATPE 237
Query: 282 ----ATSIASKSEGTTFPSMQEVV-VETGEENEKVVFSADSVLFEF--LDGSWKERGKGE 334
A S A+ ++ T + E V V TGEE E V LF F SW ERG+G
Sbjct: 238 KESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGL 297
Query: 335 LKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 390
L++N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 298 LRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 356
>UNIPROTKB|Q9H6Z4 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0070412 "R-SMAD binding"
evidence=IPI] [GO:0008536 "Ran GTPase binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:wnt_canonical_pathway Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015031 GO:GO:0046907 GO:GO:0008536
EMBL:AC004602 KO:K15304 EMBL:Y08697 EMBL:Y08698 EMBL:AK025300
EMBL:AK314343 EMBL:AL050149 EMBL:AC104532 EMBL:AC093050
EMBL:AC005784 EMBL:BC004349 IPI:IPI00026337 IPI:IPI00179121
IPI:IPI00456728 IPI:IPI00456729 PIR:T08778 RefSeq:NP_003615.2
RefSeq:NP_015559.2 RefSeq:NP_015561.1 UniGene:Hs.531752 PDB:2CRF
PDB:2Y8F PDB:2Y8G PDBsum:2CRF PDBsum:2Y8F PDBsum:2Y8G
ProteinModelPortal:Q9H6Z4 SMR:Q9H6Z4 IntAct:Q9H6Z4 STRING:Q9H6Z4
PhosphoSite:Q9H6Z4 DMDM:51316528 PaxDb:Q9H6Z4 PeptideAtlas:Q9H6Z4
PRIDE:Q9H6Z4 Ensembl:ENST00000034275 Ensembl:ENST00000340578
Ensembl:ENST00000439268 GeneID:8498 KEGG:hsa:8498 UCSC:uc002mdv.3
UCSC:uc002mdx.3 UCSC:uc002mdy.3 CTD:8498 GeneCards:GC19M005916
HGNC:HGNC:9850 HPA:HPA043375 HPA:HPA043389 MIM:603327
neXtProt:NX_Q9H6Z4 PharmGKB:PA34211 eggNOG:NOG304969
HOVERGEN:HBG061383 InParanoid:Q9H6Z4 OMA:EQEAKMP PhylomeDB:Q9H6Z4
ChiTaRS:RANBP3 EvolutionaryTrace:Q9H6Z4 GenomeRNAi:8498
NextBio:31793 ArrayExpress:Q9H6Z4 Bgee:Q9H6Z4 CleanEx:HS_RANBP3
Genevestigator:Q9H6Z4 GermOnline:ENSG00000031823 Uniprot:Q9H6Z4
Length = 567
Score = 180 (68.4 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 75/299 (25%), Positives = 121/299 (40%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTES- 165
S N VS+ A+ A D + DE A+E EP+K E ++ + E+
Sbjct: 192 SGTNGVSLPADCTGAVPAASPDTAAWRSPSEAADEVCALE--EKEPQKNESSNASEEEAC 249
Query: 166 -KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSH--ETTDXXXXX 222
K +P VD P + T++ +
Sbjct: 250 EKKDPATQQAFVFGQNLRDRVKLINESVDEADMENAGHPSADTPTATNYFLQYISSSLEN 309
Query: 223 XXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTP- 281
+ N F + G S + + + S +N +A+ + + +SS TP
Sbjct: 310 STNSADASSNKF--VFGQNMSERVLSPPKLNEVSSDANRENAAA--ESGSESSSQEATPE 365
Query: 282 ----ATSIASKSEGTTFPSMQEVV-VETGEENEKVVFSADSVLFEF--LDGSWKERGKGE 334
A S A+ ++ T + E V V TGEE E V LF F SW ERG+G
Sbjct: 366 KESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGL 425
Query: 335 LKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 390
L++N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 426 LRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 484
Score = 41 (19.5 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 5 ESALPPSKKRAAGRELSRDNP 25
E+ LPP + AGR +P
Sbjct: 82 EAQLPPFPRELAGRSAGGSSP 102
>UNIPROTKB|F1PS48 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 OMA:EQEAKMP GeneTree:ENSGT00530000063644
EMBL:AAEX03012504 EMBL:AAEX03012503 Ensembl:ENSCAFT00000029752
Uniprot:F1PS48
Length = 557
Score = 179 (68.1 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 85/299 (28%), Positives = 128/299 (42%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESK 166
S N VS+ A+ A DN S DE A+E EP+K +ESS E +
Sbjct: 187 SGTNGVSIPADCTGAMTATS---PDNPARRSPSDEVRALE--EKEPQK--NESSDTCEEE 239
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPEN--EDEKETSHETTDXXXXXXX 224
N +N ++ ++ N T D EN ET T
Sbjct: 240 N-CEKREQVAQQAFVFGQNLRDRVKLTNENTEVADM-ENAGHPSSETPTATNYFLQYISS 297
Query: 225 XXXXXTQNAFTGLAGTGFSTS-TFAFGSIPK-DGSASNSTSASVFGQVNNGNSSLFNTP- 281
T +A T F + + S PK + +S++T + + + +SS TP
Sbjct: 298 SLDNSTNSADTASNKFVFGQNMSERVLSPPKLNEVSSDATRENAAAESGSESSSQEATPE 357
Query: 282 ----ATSIASKSEGTTFPSMQEVV-VETGEENEKVVFSADSVLFEF--LDGSWKERGKGE 334
A S A+ ++ T + E V V TGEE E V LF F SW ERG+G
Sbjct: 358 KESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQIQCKLFVFDKASQSWVERGRGL 417
Query: 335 LKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 390
L++N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 418 LRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 476
>ZFIN|ZDB-GENE-040426-1627 [details] [associations]
symbol:zgc:66385 "zgc:66385" species:7955 "Danio
rerio" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
ZFIN:ZDB-GENE-040426-1627 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 KO:K15304 eggNOG:NOG304969
HOVERGEN:HBG061383 GeneTree:ENSGT00530000063644
HOGENOM:HOG000290662 OrthoDB:EOG4XSKQ3 EMBL:CU693369 EMBL:CU693493
EMBL:BC059200 IPI:IPI00510763 RefSeq:NP_956984.1 UniGene:Dr.77684
SMR:Q6PCR4 Ensembl:ENSDART00000100173 GeneID:393663 KEGG:dre:393663
InParanoid:Q6PCR4 NextBio:20814669 Uniprot:Q6PCR4
Length = 525
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 72/308 (23%), Positives = 126/308 (40%)
Query: 98 SPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGED 157
+PAA L E + S N GK GD +S ++ + + + ++GE+
Sbjct: 139 APAAKTLTEPVKTNSSCGTNG-VGKF---GDSSSENRSIF-LNNTESSDKSPKREKEGEE 193
Query: 158 ESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTD 217
Q + ++ +N E+++++ T K +D T++
Sbjct: 194 NGGAQKDDSSQKKDGAVDSSFVFG--QNIKERAKLEENSTNSDSKDSTQDPGSTNYFLQY 251
Query: 218 XXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNS-- 275
+ + G S S PK G S S V V+ +S
Sbjct: 252 MGSSSSNNATNSSDKGSKFVFGQNMSERVL---SPPKGGEVSAEASKEVSAPVSEPSSQE 308
Query: 276 -------SLFNTPATSIASKSEGTTFPS-MQEVVVETGEENEKVVFSADSVLFEFLDG-- 325
S+ + S A+ ++ T +++V V TGEE E V LF F
Sbjct: 309 ATPEKNHSVTESLEESAAAYTKATAKKCILEKVEVRTGEEAESNVLQMQCKLFVFDKPVQ 368
Query: 326 SWKERGKGELKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFA 382
SW ERG+G L++N ST+ + ++RL+MR +G+ RLILN L+P M++ +K +
Sbjct: 369 SWVERGRGLLRLNDMASTDDGSLQSRLVMRTQGSLRLILNTKLWPQMQVDKASEKSVRIT 428
Query: 383 CINSATEG 390
+++ +G
Sbjct: 429 AMDTEDQG 436
>SGD|S000002409 [details] [associations]
symbol:YRB1 "Ran GTPase binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0006405 "RNA export
from nucleus" evidence=IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] [GO:0043547 "positive
regulation of GTPase activity" evidence=IEA] [GO:0008536 "Ran
GTPase binding" evidence=IDA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 SGD:S000002409 GO:GO:0005634
GO:GO:0005737 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0000082 EMBL:BK006938 GO:GO:0006606
GO:GO:0006511 EMBL:Z48008 GO:GO:0008536 PDB:3M1I PDBsum:3M1I
GO:GO:0006405 eggNOG:COG5171 HOGENOM:HOG000176323 KO:K15306
OMA:HEDRDTT GeneTree:ENSGT00690000102083 OrthoDB:EOG496327 PDB:4GMX
PDB:4GPT PDB:4HAT PDB:4HAU PDB:4HAV PDB:4HAW PDB:4HAX PDB:4HAY
PDB:4HAZ PDB:4HB0 PDB:4HB2 PDB:4HB3 PDB:4HB4 PDBsum:4GMX
PDBsum:4GPT PDBsum:4HAT PDBsum:4HAU PDBsum:4HAV PDBsum:4HAW
PDBsum:4HAX PDBsum:4HAY PDBsum:4HAZ PDBsum:4HB0 PDBsum:4HB2
PDBsum:4HB3 PDBsum:4HB4 EMBL:X65925 EMBL:Z33503 EMBL:L38489
PIR:S50219 RefSeq:NP_010285.1 ProteinModelPortal:P41920 SMR:P41920
DIP:DIP-838N IntAct:P41920 MINT:MINT-398068 STRING:P41920
PaxDb:P41920 PeptideAtlas:P41920 PRIDE:P41920 EnsemblFungi:YDR002W
GeneID:851565 KEGG:sce:YDR002W CYGD:YDR002w
EvolutionaryTrace:P41920 NextBio:969007 Genevestigator:P41920
GermOnline:YDR002W Uniprot:P41920
Length = 201
Score = 143 (55.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRAR 354
+++V V+T EE+E+V++ + LF F D WKERG G+ K + T + R+LMR
Sbjct: 71 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKF-LKNKKTNKVRILMRRD 129
Query: 355 GNYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
++ N + P+ L N+ + +AC EG++ TFA++F ++F+
Sbjct: 130 KTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFK 188
Score = 43 (20.2 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 195 GKTAGVDKPENE-DEKETSHET 215
GK A +KPE + DE++T ET
Sbjct: 31 GKKA--EKPETKKDEEDTKEET 50
Score = 38 (18.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 149 SSEPEKGEDESSKQTESKNE 168
+ +PE +DE + E+K E
Sbjct: 34 AEKPETKKDEEDTKEETKKE 53
>FB|FBgn0039302 [details] [associations]
symbol:Nup358 "Nucleoporin 358kD" species:7227 "Drosophila
melanogaster" [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0006607 "NLS-bearing substrate import into nucleus"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=IMP] InterPro:IPR000156 InterPro:IPR001876
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF00638 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50196 PROSITE:PS50199 PROSITE:PS50293
SMART:SM00160 SMART:SM00547 EMBL:AE014297 GO:GO:0005875
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005811 GO:GO:0008270
Gene3D:1.25.40.10 GO:GO:0007184 GO:GO:0006607 HSSP:P49792
GeneTree:ENSGT00690000102083 KO:K12172 ChiTaRS:RANBP2
FlyBase:FBgn0039302 RefSeq:NP_651361.2 ProteinModelPortal:Q9VBU7
SMR:Q9VBU7 IntAct:Q9VBU7 MINT:MINT-800479 STRING:Q9VBU7
EnsemblMetazoa:FBtr0084813 GeneID:43041 KEGG:dme:Dmel_CG11856
UCSC:CG11856-RA CTD:43041 InParanoid:Q9VBU7 PhylomeDB:Q9VBU7
GenomeRNAi:43041 NextBio:831931 ArrayExpress:Q9VBU7 Bgee:Q9VBU7
Uniprot:Q9VBU7
Length = 2695
Score = 181 (68.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 42/123 (34%), Positives = 70/123 (56%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRAR 354
P EV V TGEE E + F++ + LF ++D WKERG G +K+ + ATG +R+LMR
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1373
Query: 355 GNYRLILNASLYPDMKLT----NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+++ N ++ D+ + + DKK + +A + A E + L F ++F+ + EEF
Sbjct: 1374 QTHKVCANHTITADITINVANQDKDKKSLLWAANDFADEQVT-LERFLVRFKTGELAEEF 1432
Query: 411 QTA 413
+ A
Sbjct: 1433 RVA 1435
Score = 161 (61.7 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 46/177 (25%), Positives = 87/177 (49%)
Query: 240 TGFSTSTFAFGSI-PK-DGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSM 297
T +S+F F PK D NST+A +N + + + S P
Sbjct: 1974 TSIGSSSFTFSMTKPKPDQQQPNSTAAKE--DEDNDSQEVEEEENNTYFSP----VIPLP 2027
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 357
++ V+TGEE+E++++ + L+ + WKERG G++K+ + T + R++MR +
Sbjct: 2028 DKIDVKTGEEDEELLYVHKAKLYRLNESDWKERGLGDVKI-LRHRQTKKLRVVMRREQVF 2086
Query: 358 RLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 414
++ LN L ++ + FA ++ +EG+S L F L+F++ + + F A+
Sbjct: 2087 KICLNHVLNENVVYREKTETSWMFA-VHDFSEGESVLERFTLRFKNKEVAQGFMEAI 2142
Score = 160 (61.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 54/180 (30%), Positives = 80/180 (44%)
Query: 239 GTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQ 298
G+G +T+ F I KD + T Q+N NSS A P +
Sbjct: 1559 GSGNNTTLFTTALI-KDNTVQGKTLQQE-SQLNKSNSSDAEEEYVPTAQFVPVIALPDIV 1616
Query: 299 EVVVETGEENEKVVFSADSVLFEFLD--GSWKERGKGELKVNVSTNATGRARLLMRARGN 356
EVV TGEENE V+F + L + WKERG G +K+ + RLLMR
Sbjct: 1617 EVV--TGEENEDVLFEHRAKLLRWDKEANEWKERGLGNMKLLRDRTDPNKVRLLMRREQV 1674
Query: 357 YRLILNASLYPDMKLTNMD--KKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 414
++L N L P+ K T K +T+ + + E + + A++F+ I ++F AV
Sbjct: 1675 HKLCCNQRLLPETKFTYATNCKAAVTWGAQDYSDEELT-TALLAVRFKSQDICQQFLEAV 1733
Score = 137 (53.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/126 (34%), Positives = 62/126 (49%)
Query: 299 EVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARGN 356
E+VV TGEENE +F + L+ + S WKERG GE+KV + RL+MR
Sbjct: 2543 EIVVTTGEENETKLFGERAKLYRYDAESKQWKERGVGEIKV-LEHPELQTFRLIMRQEQI 2601
Query: 357 YRLILNASLYPDMKLT--NMDKKGITFACINSAT--EGK---SG-LSTFALKFRDASIVE 408
++L+LN ++ +++ N K +A N A EGK G L A +F I
Sbjct: 2602 HKLVLNMNISASLQMDYMNAQMKSFLWAGYNYAVDAEGKVDTEGVLERLACRFAKEEIAS 2661
Query: 409 EFQTAV 414
EF V
Sbjct: 2662 EFLNTV 2667
Score = 61 (26.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/189 (23%), Positives = 69/189 (36%)
Query: 105 LESSENKVSVDANNDAGKEAEKGDGE-DNKQSESKIDEPVAVEAASSEPEKGEDESS--- 160
+E S SV + +A K ++K DG ++ ES++ + + ++P + ++
Sbjct: 2153 IEDSPVVGSVSQSTEANKPSQKNDGAAKSRGGESEVLDVGKTSSPLAKPNDYQTPATILF 2212
Query: 161 KQTE-SKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXX 219
K + S+N +KSE GK AG P +K S E
Sbjct: 2213 KGSSLSRNNSSASEASKTPSSAFIFGSTDKSEP--GKDAG---PLANLQKLASGEGQGNV 2267
Query: 220 XXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFN 279
+N+ G F A KD +S SVFG GN +
Sbjct: 2268 LGSIFRSGSSNENSSDGSVKFFFGGGNKAAEQQKKD------SSESVFG----GNKADSQ 2317
Query: 280 TPATSIASK 288
+PAT A K
Sbjct: 2318 SPATQEAPK 2326
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/121 (17%), Positives = 45/121 (37%)
Query: 158 ESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAG--VDKPENEDEKETSHET 215
++S+ +SK A KS V + A ++KP+ + + + + +
Sbjct: 1438 KASEAAKSKETVKPTVNTAEKGSTATAPAAFKSFVTSTPAANSLINKPQEQTKTQPNPDP 1497
Query: 216 TDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNS 275
+ T + ++F+F P S +++AS FG ++ G +
Sbjct: 1498 PATAAKSLFGTLSVSAAPATSAPASATPFASFSF--TPNGSSGFGTSTASPFGNLSFGTA 1555
Query: 276 S 276
S
Sbjct: 1556 S 1556
Score = 48 (22.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 132 NKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEP 169
+K SES V A++E +K ++E+ + +P
Sbjct: 1254 SKSSESPFSFKTQVAKAAAEKQKEQEEAEQNQSGATDP 1291
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 235 TGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLF 278
T G G S+ T FG K S S SA VNN SL+
Sbjct: 1869 TAALGFGKSSMTSGFGDAFKPAVGSWSCSACY---VNNPGESLY 1909
Score = 44 (20.5 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 246 TFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGT 292
T + + P + +++T + F NG+S + A+ + S GT
Sbjct: 1508 TLSVSAAPATSAPASATPFASFSFTPNGSSGFGTSTASPFGNLSFGT 1554
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEK 126
T +PAA L+ + + N D A K
Sbjct: 1473 TSTPAANSLINKPQEQTKTQPNPDPPATAAK 1503
>UNIPROTKB|B7Z7F3 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046907 EMBL:AC004602 EMBL:AC093050 EMBL:AC005784
IPI:IPI00456729 UniGene:Hs.531752 HGNC:HGNC:9850 HOVERGEN:HBG061383
HOGENOM:HOG000290662 EMBL:AK301942 ProteinModelPortal:B7Z7F3
STRING:B7Z7F3 PRIDE:B7Z7F3 Ensembl:ENST00000591092 UCSC:uc002mdz.3
ArrayExpress:B7Z7F3 Bgee:B7Z7F3 Uniprot:B7Z7F3
Length = 494
Score = 165 (63.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 68/262 (25%), Positives = 108/262 (41%)
Query: 146 EAASSEPEKGEDESSKQTES----KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVD 201
EAA E E ++ESS +E K +P VD
Sbjct: 154 EAADEEKEPQKNESSNASEEEACEKKDPATQQAFVFGQNLRDRVKLINESVDEADMENAG 213
Query: 202 KPENEDEKETSH--ETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSAS 259
P + T++ + + N F + G S + + + S +
Sbjct: 214 HPSADTPTATNYFLQYISSSLENSTNSADASSNKF--VFGQNMSERVLSPPKLNEVSSDA 271
Query: 260 NSTSASVFGQVNNGNSSLFNTP-----ATSIASKSEGTTFPSMQEVV-VETGEENEKVVF 313
N +A+ + + +SS TP A S A+ ++ T + E V V TGEE E V
Sbjct: 272 NRENAAA--ESGSESSSQEATPEKESLAESAAAYTKATARKCLLEKVEVITGEEAESNVL 329
Query: 314 SADSVLFEF--LDGSWKERGKGELKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPD 368
LF F SW ERG+G L++N ST+ T ++RL+MR +G+ RLILN L+
Sbjct: 330 QMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQ 389
Query: 369 MKLTNMDKKGITFACINSATEG 390
M++ +K I +++ +G
Sbjct: 390 MQIDKASEKSIRITAMDTEDQG 411
Score = 47 (21.6 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 120 AGKEAEKGDGEDNKQSESKIDEPVAVEAASS----EPEKGEDESS 160
AG + +G GED+ + + PV E SS P + E+ SS
Sbjct: 29 AGGSSPEG-GEDSDREDGNYCPPVKRERTSSLTQFPPSQSEERSS 72
>UNIPROTKB|F1PS47 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03012504
EMBL:AAEX03012503 Ensembl:ENSCAFT00000029754 Uniprot:F1PS47
Length = 490
Score = 169 (64.5 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 77/298 (25%), Positives = 126/298 (42%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESK 166
S N VS+ A+ A D + + EP E++ + E+E+ ++ E
Sbjct: 125 SGTNGVSIPADCTGAMTATSPDNPARRSPSDEEKEPQKNESSDT----CEEENCEKREQV 180
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSH--ETTDXXXXXXX 224
+ N E +EV + + AG P +E T++ +
Sbjct: 181 AQQAFVFGQNLRDRVKLTN--ENTEVADMENAG--HPSSETPTATNYFLQYISSSLDNST 236
Query: 225 XXXXXTQNAFTGLAGTGFSTSTFAFGSIPK-DGSASNSTSASVFGQVNNGNSSLFNTP-- 281
N F + G S S PK + +S++T + + + +SS TP
Sbjct: 237 NSADTASNKF--VFGQNMSERVL---SPPKLNEVSSDATRENAAAESGSESSSQEATPEK 291
Query: 282 ---ATSIASKSEGTTFPSMQEVV-VETGEENEKVVFSADSVLFEF--LDGSWKERGKGEL 335
A S A+ ++ T + E V V TGEE E V LF F SW ERG+G L
Sbjct: 292 ESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQIQCKLFVFDKASQSWVERGRGLL 351
Query: 336 KVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEG 390
++N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++ +G
Sbjct: 352 RLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQG 409
>POMBASE|SPBC365.13c [details] [associations]
symbol:hba1 "Ran GTPase binding protein Hba1"
species:4896 "Schizosaccharomyces pombe" [GO:0000056 "ribosomal
small subunit export from nucleus" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0034599
"cellular response to oxidative stress" evidence=IGI] [GO:0046827
"positive regulation of protein export from nucleus" evidence=IMP]
[GO:0071238 "cellular response to brefeldin A" evidence=IMP]
[GO:0071313 "cellular response to caffeine" evidence=IMP]
[GO:1901181 "negative regulation of cellular response to caffeine"
evidence=IMP] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 PomBase:SPBC365.13c GO:GO:0046827 GO:GO:0005654
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0034599 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0071313 GO:GO:0000056 EMBL:U38783
EMBL:AB027850 PIR:T40320 RefSeq:NP_596042.1
ProteinModelPortal:Q09146 EnsemblFungi:SPBC365.13c.1 GeneID:2540948
KEGG:spo:SPBC365.13c eggNOG:KOG0864 KO:K15304 OMA:ESAREYE
OrthoDB:EOG40VZZ8 NextBio:20802063 GO:GO:0071238 GO:GO:1901181
Uniprot:Q09146
Length = 399
Score = 154 (59.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 49/165 (29%), Positives = 78/165 (47%)
Query: 261 STSASVFGQVNNGNSSLFNTPATSIASKSEGT--TFPSMQEVVVETGEENEKVVFSADSV 318
+TSA F + P + + T T + + + TGEE E+ +FS +
Sbjct: 225 NTSAKAFENQKGSAGETKSEPKEADKGSGDSTKSTMHQLSDSEIITGEEEEESIFSVRAR 284
Query: 319 LFEFLDG--SWKERGKGELKVNV-STNATGRARLLMRARGNYRLILNASLYPDM-----K 370
L+ D +WKERG+G LKVNV +G RLLMR +R+I+N L+ M +
Sbjct: 285 LYVVADEKKTWKERGQGILKVNVPKQRGSGSGRLLMRNDAVHRVIMNVPLFQGMSKKSLQ 344
Query: 371 LTNMDKKG-ITFACINSATEGKSGLSTFALKFRDASIVEEFQTAV 414
+ + G + I GKS L +A++ +D S+ E+ + V
Sbjct: 345 IASASSGGSANYLKIFVIENGKSVL--YAVRVKDNSLAEQLRNHV 387
Score = 52 (23.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/115 (22%), Positives = 42/115 (36%)
Query: 105 LESSENKVSVDANN--DAGKEAEKGDGEDNKQSESKIDEPVA-VEAASSEPEKGEDESSK 161
++ +E V+V+ A K A S S P + V ASSEP++ +
Sbjct: 113 VDENEGHVAVETGKKESAAKPAASVSPFSQFASFSNASSPFSNVSTASSEPKEEKSAFGA 172
Query: 162 QTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETT 216
SK+ A ++E +GK DK +E+ E T+
Sbjct: 173 FASSKSAFTMKSVKDSPFKKFAAGTAVETESGSGKEKENDKKSSENFDELLANTS 227
>UNIPROTKB|F1SBU0 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046907 GeneTree:ENSGT00530000063644
EMBL:FP089464 Ensembl:ENSSSCT00000014780 OMA:ANRETIA Uniprot:F1SBU0
Length = 290
Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 51/143 (35%), Positives = 76/143 (53%)
Query: 254 KDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQEVV-VETGEENEKVV 312
+ GS S+S A+ + NN SL A S A+ ++ T + E V V TGEE E V
Sbjct: 71 ESGSESSSQEATP-EKANNVAESL----AESAAAYTKATARKCLLEKVEVITGEEAESNV 125
Query: 313 FSADSVLFEF--LDGSWKERGKGELKVN--VSTN-ATGRARLLMRARGNYRLILNASLYP 367
LF F SW ERG+G L++N ST+ T ++RL+MR +G+ RLILN L+
Sbjct: 126 LQIQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWA 185
Query: 368 DMKLTNMDKKGITFACINSATEG 390
M++ +K I +++ +G
Sbjct: 186 QMQIDKASEKSIRITAMDTEDQG 208
>ZFIN|ZDB-GENE-040426-1132 [details] [associations]
symbol:ranbp3 "RAN binding protein 3" species:7955
"Danio rerio" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
ZFIN:ZDB-GENE-040426-1132 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 GeneTree:ENSGT00530000063644
EMBL:AL840638 IPI:IPI00611519 Ensembl:ENSDART00000139882
OMA:TINDAEQ Bgee:F1Q591 Uniprot:F1Q591
Length = 511
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 257 SASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQEVVVETGEENEKVVFSAD 316
S +ST + +N SL + A A K + ++ V V TGEE+E V
Sbjct: 296 SQLSSTQEQTVEKSDNMKESLEESAARHEAHKPQKCL---LERVEVRTGEESESNVLQMQ 352
Query: 317 SVLF--EFLDGSWKERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKL 371
LF E L SW ERG G L++N T+ T ++RL+MR +G+ R+ILN L+P M++
Sbjct: 353 CKLFVFEMLSQSWVERGCGVLRLNDKTSTDDGTLQSRLVMRTQGSLRVILNTKLWPQMQV 412
Query: 372 TNMDKKGITFACINSATEG 390
+K + I++ +G
Sbjct: 413 DKASEKSLRITAIDTEEQG 431
>UNIPROTKB|Q24K04 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046907 KO:K15304 CTD:8498
eggNOG:NOG304969 HOVERGEN:HBG061383 OMA:EQEAKMP
GeneTree:ENSGT00530000063644 HOGENOM:HOG000290662 OrthoDB:EOG4XSKQ3
EMBL:DAAA02019573 EMBL:DAAA02019574 EMBL:BC114095 IPI:IPI00710525
RefSeq:NP_001068837.1 UniGene:Bt.7458 SMR:Q24K04 STRING:Q24K04
Ensembl:ENSBTAT00000044550 GeneID:508641 KEGG:bta:508641
InParanoid:Q24K04 NextBio:20868616 Uniprot:Q24K04
Length = 518
Score = 164 (62.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 73/275 (26%), Positives = 116/275 (42%)
Query: 131 DNKQSESKIDEPVAVEAASSEPEKG---EDESSKQTESKNEPXXXXXXXXXXXXXXENGA 187
DN S DE A+E S E E+E+ ++ E + N
Sbjct: 169 DNPAQRSPSDETPALEEKSQRNESSNASEEENCEKKEQGAQQAFVFGQNLRDRVKLIN-- 226
Query: 188 EKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTF 247
E +EV + + AG P +E T++ + + G S
Sbjct: 227 ENTEVADMENAG--HPSSETPAATNYFLQYISSSLENATNSADAASSKFVFGQNMSERVL 284
Query: 248 AFGSIPK-DGSASNSTSASVFGQVNNGNSSLFNTP-----ATSIASKSEGTTFPSMQEVV 301
S PK + +S++ + + + +SS TP A S A+ ++ T + E V
Sbjct: 285 ---SPPKLNELSSDANRENTAAESGSESSSQEATPEKESLAESAAAYTKATARKCLLEKV 341
Query: 302 -VETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVN--VSTN-ATGRARLLMRARG 355
V TGEE E V LF F SW ERG+G L++N ST+ T ++RL+MR +G
Sbjct: 342 EVITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQG 401
Query: 356 NYRLILNASLYPDMKLTNMDKKGITFACINSATEG 390
+ RLILN L+ M++ +K I +++ +G
Sbjct: 402 SLRLILNTKLWAQMQMDKASEKSIRITAMDTEDQG 436
>SGD|S000001325 [details] [associations]
symbol:YRB2 "Protein of unknown function involved in
Ran-GTPase nuclear processes" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006611 "protein export
from nucleus" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0031938 "regulation of chromatin silencing at telomere"
evidence=IMP] [GO:0005643 "nuclear pore" evidence=IDA] [GO:0046907
"intracellular transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISM] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0000056 "ribosomal small subunit export
from nucleus" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
SGD:S000001325 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 EMBL:BK006942 GO:GO:0005643 GO:GO:0006611
GO:GO:0000056 EMBL:Z38060 GO:GO:0031938 KO:K15304 OrthoDB:EOG40VZZ8
eggNOG:NOG304969 GeneTree:ENSGT00530000063644 EMBL:AY557879
PIR:S48416 RefSeq:NP_012201.1 ProteinModelPortal:P40517 SMR:P40517
DIP:DIP-2243N IntAct:P40517 MINT:MINT-486244 STRING:P40517
PaxDb:P40517 PeptideAtlas:P40517 EnsemblFungi:YIL063C GeneID:854747
KEGG:sce:YIL063C CYGD:YIL063c HOGENOM:HOG000141982 OMA:GEESEEC
NextBio:977473 Genevestigator:P40517 GermOnline:YIL063C
Uniprot:P40517
Length = 327
Score = 160 (61.4 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 55/249 (22%), Positives = 104/249 (41%)
Query: 125 EKGDGEDNKQSESKIDEPVAVEAASSE-PEKGEDESSKQTESKNEPXXXXXXXXXXXXXX 183
+K DG + E DE + SE P K ++E ++ + EP
Sbjct: 26 DKLDGTPKRPREKDQDEQAEETSDKSEAPNKNDEEKKEEGKKDQEPSHKKIKVDDGKTVE 85
Query: 184 ENGAEKSEVDN----GKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAG 239
E + ++ G + +K+T T+ F +G
Sbjct: 86 SGIVEDDKKEDKFVFGAASKFGTGFGVAKKDTKDGDATTSTESLPASDSKTKKPFAFGSG 145
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVF-GQVNNGNSSLFNTPATSIASKSEGTTFPSMQ 298
F + + ++ S S + V +V++G+ L N S +K + +Q
Sbjct: 146 LSFGSGFNILKNKTENNSESEKKATDVDKDKVHSGSEQLANA---SEDTKDKPKPL-KLQ 201
Query: 299 EVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNATGRARLLMRARGN 356
+ V++GEE+E+ ++ ++ L++ + WKERG G +K+N S + + R++MR+RG
Sbjct: 202 KQEVKSGEESEECIYQVNAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMRSRGI 261
Query: 357 YRLILNASL 365
++ILN L
Sbjct: 262 LKVILNIQL 270
>MGI|MGI:1919060 [details] [associations]
symbol:Ranbp3 "RAN binding protein 3" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=ISO]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
MGI:MGI:1919060 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015031 GO:GO:0046907 KO:K15304 CTD:8498
eggNOG:NOG304969 HOVERGEN:HBG061383 OMA:EQEAKMP ChiTaRS:RANBP3
EMBL:AK011541 EMBL:AK133949 EMBL:AK134696 EMBL:AK155301
EMBL:AK167731 EMBL:BC145892 EMBL:BC145894 IPI:IPI00135190
RefSeq:NP_082209.1 UniGene:Mm.29608 UniGene:Mm.469805
ProteinModelPortal:Q9CT10 SMR:Q9CT10 STRING:Q9CT10
PhosphoSite:Q9CT10 PaxDb:Q9CT10 PRIDE:Q9CT10
Ensembl:ENSMUST00000002445 GeneID:71810 KEGG:mmu:71810
UCSC:uc008dcv.1 GeneTree:ENSGT00530000063644 HOGENOM:HOG000290662
InParanoid:A6H6I9 OrthoDB:EOG4XSKQ3 NextBio:334576 Bgee:Q9CT10
CleanEx:MM_RANBP3 Genevestigator:Q9CT10
GermOnline:ENSMUSG00000002372 Uniprot:Q9CT10
Length = 491
Score = 163 (62.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 62/213 (29%), Positives = 94/213 (44%)
Query: 193 DNGKTAGVDK---PENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAF 249
+N A VD P +E T++ N+ + G S
Sbjct: 200 ENASVADVDSAAHPSSETPSATNY-FLQYISSSADNATHSADNSTKFVFGQNMSERVL-- 256
Query: 250 GSIPKDGSASNSTSA-SVFGQVNNGNSSLFNTP-----ATSIASKSEGTTFPSMQEVV-V 302
S PK A++ TS + Q + +SS P A S A+ ++ T + + E V V
Sbjct: 257 -SPPKLNEANSDTSRETTHAQSGSESSSQEAAPKKESLAESAAAYTKATAWTCLLEKVEV 315
Query: 303 ETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVN--VSTN-ATGRARLLMRARGNY 357
TGEE E V LF F SW ERG+G L++N ST+ T ++RL+MR +G+
Sbjct: 316 ITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSL 375
Query: 358 RLILNASLYPDMKLTNMDKKGITFACINSATEG 390
RLILN L+ M++ +K I ++ +G
Sbjct: 376 RLILNTKLWAQMQMDKASEKSIRITATDAEDQG 408
Score = 40 (19.1 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 147 AASSEPEKGED 157
A SS PE GED
Sbjct: 29 AGSSSPEAGED 39
>UNIPROTKB|F1NJ42 [details] [associations]
symbol:RANBP3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0070412 "R-SMAD binding"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005634 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046907 OMA:EQEAKMP
GeneTree:ENSGT00530000063644 EMBL:AADN02063513 EMBL:AADN02063514
IPI:IPI00587308 Ensembl:ENSGALT00000000806 Uniprot:F1NJ42
Length = 513
Score = 162 (62.1 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 78/303 (25%), Positives = 131/303 (43%)
Query: 104 LLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQT 163
+L S N V++ ++ A E+ + SE K E E+ S+ +D+S ++
Sbjct: 145 VLSSGTNGVNIPPDSAATSESLSNTTLKSSDSEDKAGECQKKESNSTS----DDDSGEKA 200
Query: 164 ESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSH--ETTDXXXX 221
E + G E + + + AG+ P ++ T++ +
Sbjct: 201 ELNAQQAFVFGQNLRDRVKL--GDESDDTADVQNAGL--PTSDAPSATNYFLQYISSSIE 256
Query: 222 XXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPK--DGSA-SNSTSASVFGQVNNGNSSLF 278
+ N F + G S S PK +GS SN +A+ + + +SS
Sbjct: 257 NSTNSADASSNKF--VFGQNMSERVL---SPPKSNEGSTESNKENAAT--ESGSESSSQE 309
Query: 279 NTP-----ATSIASKSEGTTFPSM-QEVVVETGEENEKVVFSADSVLFEFLDGS--WKER 330
TP A S A+ ++ T + +V V TGEE E V LF F S W ER
Sbjct: 310 ATPEKESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVER 369
Query: 331 GKGELKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSA 387
G+G L++N ST+ T ++RL+MR +G+ RLILN L+ M++ +K I +++
Sbjct: 370 GRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTE 429
Query: 388 TEG 390
+G
Sbjct: 430 DQG 432
>UNIPROTKB|F1NA05 [details] [associations]
symbol:LOC770700 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR000156 InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 Pfam:PF00638 PRINTS:PR00153 PROSITE:PS00170
PROSITE:PS50072 PROSITE:PS50196 SMART:SM00160 GO:GO:0006457
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00690000102083 EMBL:AADN02017888 EMBL:AADN02017889
EMBL:AADN02017890 EMBL:AADN02017891 EMBL:AADN02017892
EMBL:AADN02017893 EMBL:AADN02017894 EMBL:AADN02017895
EMBL:AADN02017896 EMBL:AADN02017897 EMBL:AADN02017898
EMBL:AADN02017899 IPI:IPI00814530 Ensembl:ENSGALT00000036568
OMA:FSCANAG Uniprot:F1NA05
Length = 434
Score = 160 (61.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 62/237 (26%), Positives = 103/237 (43%)
Query: 185 NGAEKSEVDNGKTAGVDKPENEDEKETSH----ETTDXXXXXXXXXXXXTQNAFTGLAGT 240
+ E + V G DKP + K+ S E+T + +F LA
Sbjct: 12 DSTETAHVSQNLPGGDDKPVDLSTKKESDLECSESTQEHKPISFGFGNASGLSFADLASK 71
Query: 241 GFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P--SM 297
++ FAFGS K+ +N T A+VFG + + S+ F P S+
Sbjct: 72 --NSGDFAFGSKDKNFKWAN-TGAAVFGVQTASKADEDEGGSDDEVVHSDDIHFEPIVSL 128
Query: 298 QEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARG 355
EV V++GEE+E+++F + L+ + D + WKERG GELK+ T R+LMR
Sbjct: 129 PEVEVKSGEEDEEILFKERAKLYRWDRDATQWKERGVGELKILFHTQKK-YYRILMRRDQ 187
Query: 356 NYRLILNASLYPDMKLTNMD-KKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
++ N + +M L D + +G+ + FA++F+ + F+
Sbjct: 188 VLKVCANHVITKEMNLVPSDTSNNVLIWTATDYADGEVKVEQFAVRFKVQELANSFK 244
>UNIPROTKB|G4N530 [details] [associations]
symbol:MGG_05203 "Ran-specific GTPase-activating protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 GO:GO:0005737 Gene3D:2.30.29.30 InterPro:IPR011993
EMBL:CM001233 GO:GO:0000082 GO:GO:0006606 GO:GO:0006511
GO:GO:0006405 KO:K15306 RefSeq:XP_003712748.1
ProteinModelPortal:G4N530 SMR:G4N530 EnsemblFungi:MGG_05203T0
GeneID:2675675 KEGG:mgr:MGG_05203 Uniprot:G4N530
Length = 247
Score = 140 (54.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 38/121 (31%), Positives = 70/121 (57%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFL-DGS-WKERGKGELKVNVSTNATGRARLLMRARG 355
++V V+T EE+E+ +F + LF+F+ D S WKERG G++++ + G+ RL+MR
Sbjct: 88 EKVEVKTNEESEEQLFKMRAKLFKFVKDTSEWKERGTGDVRL-LKHRENGKTRLVMRRDK 146
Query: 356 NYRLILNASLYPDMKLT-NM--DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQT 412
++ N + P+MKL+ N+ D+ + A + +EG+ T A++F ++ F+
Sbjct: 147 TLKVCANHYIIPEMKLSPNVGSDRSWVWNAAAD-VSEGEPEGVTLAIRFANSENANSFKD 205
Query: 413 A 413
A
Sbjct: 206 A 206
Score = 45 (20.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 116 ANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDE 158
++ DA K E G ++ K S D ++ ++ EK EDE
Sbjct: 2 SSTDATKPVEAGKPDETKPVTS--DAVFSMFGGGAKKEKKEDE 42
>POMBASE|SPBC1773.07c [details] [associations]
symbol:sbp1 "Ran GTPase binding protein Sbp1"
species:4896 "Schizosaccharomyces pombe" [GO:0005096 "GTPase
activator activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006405 "RNA
export from nucleus" evidence=ISO] [GO:0006606 "protein import into
nucleus" evidence=ISO] [GO:0031291 "Ran protein signal
transduction" evidence=IGI] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 PomBase:SPBC1773.07c GO:GO:0005525
GO:GO:0005829 GO:GO:0005096 GO:GO:0043547 Gene3D:2.30.29.30
InterPro:IPR011993 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0006606 GO:GO:0006405 eggNOG:COG5171 HOGENOM:HOG000176323
KO:K15306 GO:GO:0031291 EMBL:D86381 EMBL:D76431 PIR:T43209
PIR:T51307 RefSeq:NP_595122.1 ProteinModelPortal:Q09717 SMR:Q09717
STRING:Q09717 EnsemblFungi:SPBC1773.07c.1 GeneID:2540142
KEGG:spo:SPBC1773.07c OMA:HTSTENA OrthoDB:EOG496327
NextBio:20801278 Uniprot:Q09717
Length = 215
Score = 140 (54.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVSTNATGRARLLMRAR 354
+ V +T EE E V F + LF F WKERG G+ ++ + TG+ RL+MR
Sbjct: 81 LSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARL-LKHKETGKTRLVMRRD 139
Query: 355 GNYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
++ N L P+MKLT N+ + + +EG+ TFA++F ++ F+
Sbjct: 140 KTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENANLFK 198
Score = 38 (18.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 17/71 (23%), Positives = 21/71 (29%)
Query: 134 QSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVD 193
+ E K E SS ED +SKQTE EK +
Sbjct: 4 EQEKKTQGTTKEEQKSSFAS--EDVASKQTEEAKAVFGDGVAKQENKSGASTNDEKKPAE 61
Query: 194 NGKTAGVDKPE 204
+ A PE
Sbjct: 62 GDEDAEPASPE 72
>GENEDB_PFALCIPARUM|PFD0950w [details] [associations]
symbol:PFD0950w "ran binding protein 1"
species:5833 "Plasmodium falciparum" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] InterPro:IPR000156
Pfam:PF00638 PROSITE:PS50196 SMART:SM00160 GO:GO:0005525
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006260 GO:GO:0003924
GO:GO:0005622 GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351504.1
HSSP:P43487 ProteinModelPortal:Q76NN6 IntAct:Q76NN6
MINT:MINT-1591311 EnsemblProtists:PFD0950w:mRNA GeneID:812489
KEGG:pfa:PFD0950w EuPathDB:PlasmoDB:PF3D7_0419600 KO:K03864
OMA:YANEESP ProtClustDB:CLSZ2432092 Uniprot:Q76NN6
Length = 280
Score = 149 (57.5 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 281 PATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVS 340
P + + + T ++EV ++TGEE+E + +S S L+ +++G WKERG GE K+ +
Sbjct: 10 PEEEVVTGNWNTPKVELKEVEIKTGEEDESLFWSGRSKLYRWVEGEWKERGLGESKLLLH 69
Query: 341 TNATGRARLLMRARGNYRLILNASLYPD---MKLT-NMDKKGITFACINSATEGKSGLST 396
G R L+R +++ N +YP+ KL N + I + E + +
Sbjct: 70 KKK-GIIRFLLRQEKTLKVVANHYIYPNESYCKLVPNAGSEKIYAWTVKDFAE-EPKIEQ 127
Query: 397 FALKFRDASIVEEFQ 411
FALKF A + F+
Sbjct: 128 FALKFNTADAAKLFK 142
>UNIPROTKB|Q76NN6 [details] [associations]
symbol:PFD0950w "Ran binding protein 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 GO:GO:0005525 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0006260 GO:GO:0003924 GO:GO:0005622
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351504.1 HSSP:P43487
ProteinModelPortal:Q76NN6 IntAct:Q76NN6 MINT:MINT-1591311
EnsemblProtists:PFD0950w:mRNA GeneID:812489 KEGG:pfa:PFD0950w
EuPathDB:PlasmoDB:PF3D7_0419600 KO:K03864 OMA:YANEESP
ProtClustDB:CLSZ2432092 Uniprot:Q76NN6
Length = 280
Score = 149 (57.5 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/135 (29%), Positives = 68/135 (50%)
Query: 281 PATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVS 340
P + + + T ++EV ++TGEE+E + +S S L+ +++G WKERG GE K+ +
Sbjct: 10 PEEEVVTGNWNTPKVELKEVEIKTGEEDESLFWSGRSKLYRWVEGEWKERGLGESKLLLH 69
Query: 341 TNATGRARLLMRARGNYRLILNASLYPD---MKLT-NMDKKGITFACINSATEGKSGLST 396
G R L+R +++ N +YP+ KL N + I + E + +
Sbjct: 70 KKK-GIIRFLLRQEKTLKVVANHYIYPNESYCKLVPNAGSEKIYAWTVKDFAE-EPKIEQ 127
Query: 397 FALKFRDASIVEEFQ 411
FALKF A + F+
Sbjct: 128 FALKFNTADAAKLFK 142
>CGD|CAL0005670 [details] [associations]
symbol:YRB1 species:5476 "Candida albicans" [GO:0007264
"small GTPase mediated signal transduction" evidence=IGI]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005096 "GTPase activator
activity" evidence=ISS] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISS] [GO:0006913 "nucleocytoplasmic
transport" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0031291 "Ran protein signal transduction"
evidence=IEA] [GO:0006405 "RNA export from nucleus" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
CGD:CAL0005670 GO:GO:0005634 GO:GO:0005737 GO:GO:0007264
GO:GO:0000226 GO:GO:0005096 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0006913 GO:GO:0008536 EMBL:AACQ01000039 eggNOG:COG5171
KO:K15306 RefSeq:XP_718634.1 ProteinModelPortal:Q5AAL2 SMR:Q5AAL2
STRING:Q5AAL2 GeneID:3639663 KEGG:cal:CaO19.7477 Uniprot:Q5AAL2
Length = 212
Score = 128 (50.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARG 355
++V V+T EE+E+V++ + LF F S WKERG G++K + TG+ R+LMR
Sbjct: 83 KKVDVKTNEEDEEVLYKVRAKLFRFHGDSKEWKERGTGDVKF-LKHKTTGKVRILMRRDK 141
Query: 356 NYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
++ N + D +L N+ + + +EG+ T A++F + + F+
Sbjct: 142 TLKICANHLISADYELKPNIGSDRSWVYTVTADVSEGEPEAQTLAIRFGNKENADLFK 199
Score = 51 (23.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESK 138
E S+NK D + K+ K G+DN+ +E +
Sbjct: 39 EDSDNKKESDKKEE--KDTSKSTGDDNEVAEEE 69
Score = 46 (21.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 122 KEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESS 160
K+ E+ D ++ K+S+ K +E ++ + E E+E +
Sbjct: 34 KKPEQEDSDNKKESDKK-EEKDTSKSTGDDNEVAEEEEA 71
Score = 40 (19.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 188 EKSEVDNGKTAGVDKPENEDEKETSHETT 216
+K E D K+ G D E +E+E E T
Sbjct: 49 KKEEKDTSKSTGDDN-EVAEEEEADVEFT 76
Score = 40 (19.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSE 151
+ + K ++D KE++K + +D +S +E E A E
Sbjct: 30 AKKEKKPEQEDSDNKKESDKKEEKDTSKSTGDDNEVAEEEEADVE 74
>UNIPROTKB|Q5AAL2 [details] [associations]
symbol:YRB1 "Putative uncharacterized protein YRB1"
species:237561 "Candida albicans SC5314" [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0005096 "GTPase
activator activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IGI] [GO:0008536 "Ran
GTPase binding" evidence=ISS] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISS] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 CGD:CAL0005670 GO:GO:0005634
GO:GO:0005737 GO:GO:0007264 GO:GO:0000226 GO:GO:0005096
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0006913 GO:GO:0008536
EMBL:AACQ01000039 eggNOG:COG5171 KO:K15306 RefSeq:XP_718634.1
ProteinModelPortal:Q5AAL2 SMR:Q5AAL2 STRING:Q5AAL2 GeneID:3639663
KEGG:cal:CaO19.7477 Uniprot:Q5AAL2
Length = 212
Score = 128 (50.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARG 355
++V V+T EE+E+V++ + LF F S WKERG G++K + TG+ R+LMR
Sbjct: 83 KKVDVKTNEEDEEVLYKVRAKLFRFHGDSKEWKERGTGDVKF-LKHKTTGKVRILMRRDK 141
Query: 356 NYRLILNASLYPDMKLT-NMDK-KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
++ N + D +L N+ + + +EG+ T A++F + + F+
Sbjct: 142 TLKICANHLISADYELKPNIGSDRSWVYTVTADVSEGEPEAQTLAIRFGNKENADLFK 199
Score = 51 (23.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESK 138
E S+NK D + K+ K G+DN+ +E +
Sbjct: 39 EDSDNKKESDKKEE--KDTSKSTGDDNEVAEEE 69
Score = 46 (21.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 122 KEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESS 160
K+ E+ D ++ K+S+ K +E ++ + E E+E +
Sbjct: 34 KKPEQEDSDNKKESDKK-EEKDTSKSTGDDNEVAEEEEA 71
Score = 40 (19.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 188 EKSEVDNGKTAGVDKPENEDEKETSHETT 216
+K E D K+ G D E +E+E E T
Sbjct: 49 KKEEKDTSKSTGDDN-EVAEEEEADVEFT 76
Score = 40 (19.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSE 151
+ + K ++D KE++K + +D +S +E E A E
Sbjct: 30 AKKEKKPEQEDSDNKKESDKKEEKDTSKSTGDDNEVAEEEEADVE 74
>RGD|1560047 [details] [associations]
symbol:Ranbp2 "RAN binding protein 2" species:10116 "Rattus
norvegicus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=ISO] [GO:0006457 "protein folding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016925 "protein
sumoylation" evidence=ISO] [GO:0031965 "nuclear membrane"
evidence=ISO] [GO:0042405 "nuclear inclusion body" evidence=ISO]
[GO:0044615 "nuclear pore nuclear basket" evidence=ISO] [GO:0046907
"intracellular transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR001440 InterPro:IPR001876 InterPro:IPR002130
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 RGD:1560047
GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00690000102083
OrthoDB:EOG4J3WG2 InterPro:IPR022011 Pfam:PF12185 IPI:IPI00371944
ProteinModelPortal:D4A054 IntAct:D4A054 Ensembl:ENSRNOT00000001044
UCSC:RGD:1560047 Uniprot:D4A054
Length = 3055
Score = 161 (61.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 74/304 (24%), Positives = 135/304 (44%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ E ++ G +++ +TE+ N P
Sbjct: 2581 DEDNGNGEDFQSELRKVQEAQKSQSEKVTNTVGIEQTG-ETEATN-PDGSKSE------- 2631
Query: 183 XENGAEKSEVDNGKTAG-VDKPEN-EDEKETSHE--TTDXXXXXXXXXXXXTQNAFTGLA 238
E ++ + G +DKP + +KET E + T +F LA
Sbjct: 2632 -EPDSDTKHSSSSPVPGTMDKPVDLSTKKETDMEFPSQGESKTVLFGFGSGTGLSFADLA 2690
Query: 239 GTGFSTSTFAFGSIPKDGSAS-NSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P- 295
+ ++ FAFG PKD + +T A+VFG + + +E F P
Sbjct: 2691 SS--NSGDFAFG--PKDKNFQWANTGAAVFGTQSTSKDGDDEDGSDEDVVHNEDIHFEPI 2746
Query: 296 -SMQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMR 352
S+ EV V++GEE+E+V+F + L+ + D S WKERG G++K+ + + R+LMR
Sbjct: 2747 VSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKI-LWHSVKNYYRILMR 2805
Query: 353 ARGNYRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+++ N + M+L N + + + A +G++ + A++F+ I E F
Sbjct: 2806 RDQVFKVCANHVITKAMELKPLNFSNNALVWTASDYA-DGEAKIEQLAVRFKTKEITECF 2864
Query: 411 QTAV 414
+ +
Sbjct: 2865 KKKI 2868
Score = 142 (55.0 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 2102 FGESTTGFNFSFKSALSPSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 2157
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
+ V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2158 LPDLIEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 2216
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L M ++ + AC +G+ + A++F+ + + F
Sbjct: 2217 DQVLKLCANHRITPDMTLQTMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSF 2274
Query: 411 Q 411
+
Sbjct: 2275 K 2275
Score = 138 (53.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1863 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1920
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1921 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1978
Score = 134 (52.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLM 351
P ++ V+TGEE+E+ F + LF F DG WKERG G +K+ + +G+ RLLM
Sbjct: 1171 PLPDKIEVKTGEEDEEEFFCNRAKLFRF-DGESKEWKERGIGNVKI-LRHKTSGKIRLLM 1228
Query: 352 RARGNYRLILNASLYPDMKLT 372
R ++ N + PDMKLT
Sbjct: 1229 RREQVLKICANHYISPDMKLT 1249
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 261 STSASVFGQVNNGNSSLFNTPATSIAS 287
S+S+ +F Q G F +PAT I S
Sbjct: 928 SSSSCMFSQEMYGPPLRFESPATGILS 954
>UNIPROTKB|P48820 [details] [associations]
symbol:RANBP2 "E3 SUMO-protein ligase RanBP2" species:9913
"Bos taurus" [GO:0044615 "nuclear pore nuclear basket"
evidence=ISS] [GO:0042405 "nuclear inclusion body" evidence=ISS]
[GO:0031965 "nuclear membrane" evidence=ISS] [GO:0016925 "protein
sumoylation" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 InterPro:IPR002130
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00638 PRINTS:PR00153
PROSITE:PS00170 PROSITE:PS50072 PROSITE:PS50196 SMART:SM00160
UniPathway:UPA00886 GO:GO:0006457 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0016874 GO:GO:0015031 GO:GO:0005643
GO:GO:0046907 GO:GO:0051028 GO:GO:0016925 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 eggNOG:COG5171 EMBL:L41691
EMBL:L41692 IPI:IPI00711969 IPI:IPI00837553 UniGene:Bt.4771
ProteinModelPortal:P48820 SMR:P48820 STRING:P48820 PRIDE:P48820
HOGENOM:HOG000089994 InParanoid:P48820 OrthoDB:EOG4J3WG2
InterPro:IPR022011 Pfam:PF12185 Uniprot:P48820
Length = 1085
Score = 156 (60.0 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 63/239 (26%), Positives = 108/239 (45%)
Query: 185 NGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFT-GLAGTGFS 243
+GA +E G T D + ++ ++ +N F G + TGF+
Sbjct: 75 SGAPNTET-TGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFN 133
Query: 244 TSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----PSM 297
F+F S + S S S G++N +S+ + + + E G F P
Sbjct: 134 ---FSFKS-----ALSPSKSP---GKLNQSGASVGTDEDSDVTQEEERDGQHFEPVVPLP 182
Query: 298 QEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARG 355
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 183 DLVEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKI-LQNYENKQVRIVMRRDQ 241
Query: 356 NYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F+
Sbjct: 242 VLKLCANHRITPDMTLQNMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSFK 298
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/222 (25%), Positives = 105/222 (47%)
Query: 200 VDKPEN-EDEKETSHETTDXXXXXXXXXXXXTQN--AFTGLAGTGFSTSTFAFGSIPKDG 256
VDKP + KE ++T + +F LA + ++ FAFGS K+
Sbjct: 679 VDKPVDLSTRKENDADSTSQVESKTVTFGFGSGPGLSFADLASS--NSGDFAFGSKDKNF 736
Query: 257 SASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P--SMQEVVVETGEENEKVVF 313
+N T A+VFG + + +E F P S+ EV V++GEE+E+++F
Sbjct: 737 QWAN-TGAAVFGAQSTSKVGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILF 795
Query: 314 SADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKL 371
+ L+ + + S WK+RG G++K+ T R+LMR +++ N + M+L
Sbjct: 796 KERAKLYRWDREASQWKDRGVGDIKILWHT-VKNYFRILMRRDQVFKVCANHVITKTMEL 854
Query: 372 T--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
N+ + + + A +G++ + A++F+ + + F+
Sbjct: 855 KPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEMADCFK 895
>MGI|MGI:894323 [details] [associations]
symbol:Ranbp2 "RAN binding protein 2" species:10090 "Mus
musculus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016925 "protein sumoylation" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042405 "nuclear
inclusion body" evidence=ISO] [GO:0044615 "nuclear pore nuclear
basket" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR001440 InterPro:IPR001876 InterPro:IPR002130
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 UniPathway:UPA00886
MGI:MGI:894323 GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 GO:GO:0016874 GO:GO:0015031 GO:GO:0008270
GO:GO:0005643 Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0051028
GO:GO:0016925 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
eggNOG:COG5171 GeneTree:ENSGT00690000102083 HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 InterPro:IPR022011 Pfam:PF12185 CTD:5903
HOVERGEN:HBG092361 KO:K12172 ChiTaRS:RANBP2 EMBL:AF279458
EMBL:AC158593 EMBL:AK041932 EMBL:X87337 IPI:IPI00337844 PIR:S57968
RefSeq:NP_035370.2 UniGene:Mm.431695 UniGene:Mm.485644
ProteinModelPortal:Q9ERU9 SMR:Q9ERU9 IntAct:Q9ERU9 STRING:Q9ERU9
PhosphoSite:Q9ERU9 PaxDb:Q9ERU9 PRIDE:Q9ERU9
Ensembl:ENSMUST00000003310 GeneID:19386 KEGG:mmu:19386
UCSC:uc007fdd.1 InParanoid:Q9ERU9 OMA:GQWDCNV NextBio:296497
Bgee:Q9ERU9 CleanEx:MM_RANBP2 Genevestigator:Q9ERU9
GermOnline:ENSMUSG00000003226 Uniprot:Q9ERU9
Length = 3053
Score = 157 (60.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 75/299 (25%), Positives = 128/299 (42%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ EA S+ EK D + + E
Sbjct: 2579 DEDNGNGEDFQSELRKV-----CEAQKSQNEKVTDRVGIEHIGETEVTNPVGCKSEEPDS 2633
Query: 183 XENGAEKSEVDNGKTAGVDKPEN-EDEKETSHE--TTDXXXXXXXXXXXXTQNAFTGLAG 239
+ S V + +DKP + KET E + T +F LA
Sbjct: 2634 DTKHSSSSPV----SGTMDKPVDLSTRKETDMEFPSKGENKPVLFGFGSGTGLSFADLAS 2689
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P--S 296
+ ++ FAFGS K+ +N T A+VFG + +E F P S
Sbjct: 2690 S--NSGDFAFGSKDKNFQWAN-TGAAVFGTQTTSKGGEDEDGSDEDVVHNEDIHFEPIVS 2746
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRAR 354
+ EV V++GEE+E+V+F + L+ + D S WKERG G++K+ T R+LMR
Sbjct: 2747 LPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTMKK-YYRILMRRD 2805
Query: 355 GNYRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+++ N + M+L N+ + + + A +G++ + A++F+ + E F+
Sbjct: 2806 QVFKVCANHVITKAMELKPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEMTESFK 2863
Score = 143 (55.4 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 49/181 (27%), Positives = 85/181 (46%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 2097 FGESTTGFNFSFKSALSPSKSPA----KLNQSGASVGTDEESDVTQEEERDGQYFEPVVP 2152
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2153 LPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 2211
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L M ++ + AC +G+ + A++F+ + + F
Sbjct: 2212 DQVLKLCANHRITPDMTLQTMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSF 2269
Query: 411 Q 411
+
Sbjct: 2270 K 2270
Score = 138 (53.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1858 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1915
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1916 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1973
Score = 134 (52.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLM 351
P ++ V+TGEE+E+ F + LF F DG WKERG G +K+ + +G+ RLLM
Sbjct: 1171 PLPDKIEVKTGEEDEEEFFCNRAKLFRF-DGESKEWKERGIGNVKI-LRHKTSGKIRLLM 1228
Query: 352 RARGNYRLILNASLYPDMKLT 372
R ++ N + PDMKLT
Sbjct: 1229 RREQVLKICANHYISPDMKLT 1249
Score = 47 (21.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 261 STSASVFGQVNNGNSSLFNTPATSIAS 287
S+SA +F Q G F +PAT I S
Sbjct: 928 SSSACMFSQEMYGPPLRFESPATGILS 954
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 237 LAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVN 271
L G G+S G P G AS S + FG N
Sbjct: 1075 LQGDGYS------GLKPISGQASGSRNTFSFGSKN 1103
>ASPGD|ASPL0000058693 [details] [associations]
symbol:AN0084 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008536 "Ran GTPase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0031291 "Ran protein signal transduction"
evidence=IEA] [GO:0006405 "RNA export from nucleus" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 EMBL:BN001308 GO:GO:0005622
GO:GO:0046907 EMBL:AACD01000003 eggNOG:COG5171 HOGENOM:HOG000176323
KO:K15306 OrthoDB:EOG496327 OMA:ETGANED RefSeq:XP_657688.1
ProteinModelPortal:Q5BH96 SMR:Q5BH96 STRING:Q5BH96
EnsemblFungi:CADANIAT00002666 GeneID:2875862 KEGG:ani:AN0084.2
Uniprot:Q5BH96
Length = 242
Score = 140 (54.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 61/234 (26%), Positives = 98/234 (41%)
Query: 190 SEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFA- 248
S+V K K + E + E + TT+ + A T S S F+
Sbjct: 2 SDVAETKPDPATKAQEETKPEETTTTTEPSKTEEVKEAAESAAETVKDAATKTSDSVFSM 61
Query: 249 FGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSM----QEVVVET 304
FG PK V +G+S A +S F + + V V+T
Sbjct: 62 FGGGPKK---EKKEEEDV--DEPSGSSKAQKAEDEEEAPESPDVHFEPVIRLTETVEVKT 116
Query: 305 GEENEKVVFSADSVLFEFLDGS--WKERGKGELKVNVSTNATGRARLLMRARGNYRLILN 362
EE E+ F + LF F S WKERG G++++ + G+ RL+MR ++ N
Sbjct: 117 NEELEEQTFKMRAKLFRFDRDSKEWKERGTGDVRL-LKHKENGKTRLVMRRDKTLKVCAN 175
Query: 363 ASLYPDMKLT-NM--DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQTA 413
+ PDMKL+ N+ D+ + A + +EG+ T A++F ++ F+ A
Sbjct: 176 HYIVPDMKLSPNVGSDRSWVWNAAAD-VSEGEPEAQTLAIRFANSENANLFKEA 228
>UNIPROTKB|E7ES93 [details] [associations]
symbol:RGPD1 "RANBP2-like and GRIP domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 EMBL:AC111200 HGNC:HGNC:32414
ChiTaRS:RGPD1 IPI:IPI00941935 ProteinModelPortal:E7ES93 SMR:E7ES93
Ensembl:ENST00000456925 ArrayExpress:E7ES93 Bgee:E7ES93
Uniprot:E7ES93
Length = 644
Score = 148 (57.2 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 188 FDESTTGFNFSFKSALSLSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 243
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 244 LPDLVEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 302
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 303 DQVLKLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSF 360
Query: 411 Q 411
+
Sbjct: 361 K 361
>ZFIN|ZDB-GENE-081104-93 [details] [associations]
symbol:si:ch1073-55a19.2 "si:ch1073-55a19.2"
species:7955 "Danio rerio" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
InterPro:IPR000156 InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 Pfam:PF00638 PRINTS:PR00153 PROSITE:PS00170
PROSITE:PS50072 PROSITE:PS50196 SMART:SM00160
ZFIN:ZDB-GENE-081104-93 GO:GO:0006457 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00690000102083
InterPro:IPR022011 Pfam:PF12185 EMBL:CU638712 IPI:IPI00933182
Ensembl:ENSDART00000135682 Uniprot:F1QCK7
Length = 604
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 233 AFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPA--TSIASKSE 290
+F LA T + FAFG ++ S SN+ A+VFG + + A S+
Sbjct: 233 SFADLAKT---SGEFAFGKKDENFSWSNA-GAAVFGAAARAETHRDDDDEGDDDEAPHSD 288
Query: 291 GTTF-P--SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATG 345
F P S+ EV V +GEE+E+++F L+ + D WKERG GELK+
Sbjct: 289 EIHFEPIVSLPEVEVRSGEEDEEILFKERCRLYRWDRDLQQWKERGVGELKILFHPQKKS 348
Query: 346 RARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSAT---EGKSGLSTFALKFR 402
RLLMR ++ N ++ + LT+M+ A + +AT EG + A+KF+
Sbjct: 349 Y-RLLMRREQVLKVCANHTISSGITLTHMNSSAN--ALVWTATDYAEGDGKVEQLAVKFK 405
Query: 403 DASIVEEFQ 411
A + + F+
Sbjct: 406 SADLAQSFR 414
>UNIPROTKB|Q86VV4 [details] [associations]
symbol:RANBP3L "Ran-binding protein 3-like" species:9606
"Homo sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
EMBL:CH471119 EMBL:AC008807 HOVERGEN:HBG061383 HOGENOM:HOG000290662
EMBL:AK058151 EMBL:AK302947 EMBL:AC114277 EMBL:BC047660
IPI:IPI00328996 IPI:IPI00643706 IPI:IPI00922543
RefSeq:NP_001154901.1 RefSeq:NP_659437.3 UniGene:Hs.729817
HSSP:Q9H6Z4 ProteinModelPortal:Q86VV4 SMR:Q86VV4 PhosphoSite:Q86VV4
DMDM:74759446 PRIDE:Q86VV4 Ensembl:ENST00000296604
Ensembl:ENST00000502994 Ensembl:ENST00000515759 GeneID:202151
KEGG:hsa:202151 UCSC:uc003jkh.3 CTD:202151 GeneCards:GC05M036286
HGNC:HGNC:26353 HPA:HPA037471 neXtProt:NX_Q86VV4
PharmGKB:PA162400660 eggNOG:NOG294696 InParanoid:Q86VV4 OMA:DCGTLQS
OrthoDB:EOG4868CP PhylomeDB:Q86VV4 GenomeRNAi:202151 NextBio:90256
ArrayExpress:Q86VV4 Bgee:Q86VV4 CleanEx:HS_RANBP3L
Genevestigator:Q86VV4 Uniprot:Q86VV4
Length = 465
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 41/111 (36%), Positives = 64/111 (57%)
Query: 274 NSSLFNTPATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERG 331
N+SL + A A S+ + ++++ V TGEE E V + LF F SW ERG
Sbjct: 264 NTSLIESAA---AFSSQPSRKCLLEKIDVITGEETEHNVLKINCKLFIFNKTTQSWIERG 320
Query: 332 KGELKVN--VSTNA-TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
+G L++N ST+ T ++RL+MR +G+ RLILN+ L+ MK+ + K +
Sbjct: 321 RGTLRLNDTASTDCGTLQSRLIMRNQGSLRLILNSKLWAQMKIQRANHKNV 371
>ZFIN|ZDB-GENE-030131-1689 [details] [associations]
symbol:nup50 "nucleoporin 50" species:7955 "Danio
rerio" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 ZFIN:ZDB-GENE-030131-1689 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005643 GO:GO:0046907
GeneTree:ENSGT00440000035348 EMBL:CU694375 EMBL:FP067450
IPI:IPI00497833 Ensembl:ENSDART00000004739 ArrayExpress:F1R0E4
Bgee:F1R0E4 Uniprot:F1R0E4
Length = 422
Score = 125 (49.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 250 GSIPKDGSASNSTSASVFGQ-VNNGNSSLFNTPATSIASKSEGTTFPSMQEVVVETGEEN 308
G P +S+S+S++VFG V++ +S + N+ + S + G VV+ +E
Sbjct: 251 GGAPSFSFSSSSSSSAVFGSAVSSVSSPVVNSDSNSQTADENGEDSEEPPVPVVKEIKEK 310
Query: 309 EKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RLILNASLYP 367
+ +S LF DG +KE+G G L + ++T + + +LL+RA N ++LN +
Sbjct: 311 D-AFYSKKCKLFYKKDGEFKEKGVGTLHLKMTTES--KLQLLVRADTNLGNILLNIMVPS 367
Query: 368 DMKLTNMDKKGITFACI-NSATEGKS 392
M + K + C+ N + K+
Sbjct: 368 SMPCSRTGKNNVMVVCVPNPPVDDKN 393
Score = 61 (26.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 39 GTFKKATDEVLATRRIVKVRRNQTASTPSSNPFAGIR 75
GTF A+D+V+ R I K +R A S F +
Sbjct: 25 GTFSIASDDVMKNRAIKKAKRRNVAEGESGGAFKAFK 61
>UNIPROTKB|K7EIJ4 [details] [associations]
symbol:RANBP3 "Ran-binding protein 3" species:9606 "Homo
sapiens" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 EMBL:AC004602 EMBL:AC093050
EMBL:AC005784 HGNC:HGNC:9850 Ensembl:ENST00000587479 Uniprot:K7EIJ4
Length = 155
Score = 122 (48.0 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 319 LFEFLDGSWKERGKGELKVN--VSTN-ATGRARLLMRARGNYRLILNASLYPDMKLTNMD 375
+F+ SW ERG+G L++N ST+ T ++RL+MR +G+ RLILN L+ M++
Sbjct: 7 VFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKAS 66
Query: 376 KKGITFACINSATEG 390
+K I +++ +G
Sbjct: 67 EKSIRITAMDTEDQG 81
>UNIPROTKB|Q7Z3J3 [details] [associations]
symbol:RGPD4 "RanBP2-like and GRIP domain-containing
protein 4" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 eggNOG:COG5171 HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 HOVERGEN:HBG108404 EMBL:BX537861 EMBL:AC009963
EMBL:AC096655 IPI:IPI00375793 IPI:IPI00879540 RefSeq:NP_872394.2
UniGene:Hs.449164 ProteinModelPortal:Q7Z3J3 SMR:Q7Z3J3
IntAct:Q7Z3J3 STRING:Q7Z3J3 PhosphoSite:Q7Z3J3 DMDM:166225161
PaxDb:Q7Z3J3 PRIDE:Q7Z3J3 Ensembl:ENST00000408999 GeneID:285190
KEGG:hsa:285190 UCSC:uc002tdu.3 CTD:285190 GeneCards:GC02P108443
H-InvDB:HIX0024221 HGNC:HGNC:32417 MIM:612707 neXtProt:NX_Q7Z3J3
PharmGKB:PA142671073 InParanoid:Q7Z3J3 PhylomeDB:Q7Z3J3
GenomeRNAi:285190 NextBio:95333 ArrayExpress:Q7Z3J3 Bgee:Q7Z3J3
CleanEx:HS_RGPD4 Genevestigator:Q7Z3J3 Uniprot:Q7Z3J3
Length = 1758
Score = 155 (59.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 52/189 (27%), Positives = 90/189 (47%)
Query: 237 LAGTGFSTSTFAFGSIPKDGSASNSTSASVF---GQVNNGNSSLFNTPATSIASKSE--G 291
LA + + F FG + S ++ S ++N +S+ + + + E G
Sbjct: 1273 LASSPVRKNLFHFGESTTGSNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDG 1332
Query: 292 TTF----PSMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATG 345
F P V V +GEENEKVVFS + L+ + D G WKERG G++K+ +
Sbjct: 1333 QYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNK 1391
Query: 346 RARLLMRARGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFR 402
+ R++MR +L N ++ PDM L NM ++ + AC +G+ + A++F+
Sbjct: 1392 QVRIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFK 1449
Query: 403 DASIVEEFQ 411
+ + F+
Sbjct: 1450 LQDVADSFK 1458
Score = 133 (51.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLM 351
P E+V+ GEE EKV++S LF F D WKERG G LK+ + G+ R+LM
Sbjct: 1045 PEKVELVI--GEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKPRMLM 1100
Query: 352 RARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVE 408
R ++ N + M L + G A + SA++ G + L A KF+ + E
Sbjct: 1101 RREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAE 1158
Query: 409 EFQ 411
EF+
Sbjct: 1159 EFK 1161
Score = 46 (21.3 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 22/99 (22%), Positives = 39/99 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+ EKE S + + +N G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQ-EKE-SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 976
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 977 KSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKA 1015
Score = 43 (20.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK- 154
T + TE +S++ S+ + D K G K+SE ++ +A +K
Sbjct: 899 TKGSSNTEF-KSTKEGFSIPVSADGFKFGISEPGNQEKESEKPLENDTGFQAQDISGQKN 957
Query: 155 GEDESSKQTES 165
G QT S
Sbjct: 958 GRGVIFGQTSS 968
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAA-S 149
K S A +L S K++ AN D K+ A K + D+ E + P VE
Sbjct: 994 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVIG 1053
Query: 150 SEPEK 154
E EK
Sbjct: 1054 EEGEK 1058
>UNIPROTKB|J3KNY6 [details] [associations]
symbol:RGPD4 "RanBP2-like and GRIP domain-containing
protein 4" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC009963 EMBL:AC096655 HGNC:HGNC:32417
ProteinModelPortal:J3KNY6 Ensembl:ENST00000354986 OMA:MANKANS
Uniprot:J3KNY6
Length = 1766
Score = 155 (59.6 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 52/189 (27%), Positives = 90/189 (47%)
Query: 237 LAGTGFSTSTFAFGSIPKDGSASNSTSASVF---GQVNNGNSSLFNTPATSIASKSE--G 291
LA + + F FG + S ++ S ++N +S+ + + + E G
Sbjct: 1273 LASSPVRKNLFHFGESTTGSNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDG 1332
Query: 292 TTF----PSMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATG 345
F P V V +GEENEKVVFS + L+ + D G WKERG G++K+ +
Sbjct: 1333 QYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNK 1391
Query: 346 RARLLMRARGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFR 402
+ R++MR +L N ++ PDM L NM ++ + AC +G+ + A++F+
Sbjct: 1392 QVRIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFK 1449
Query: 403 DASIVEEFQ 411
+ + F+
Sbjct: 1450 LQDVADSFK 1458
Score = 133 (51.9 bits), Expect = 7.6e-05, Sum P(2) = 7.5e-05
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLM 351
P E+V+ GEE EKV++S LF F D WKERG G LK+ + G+ R+LM
Sbjct: 1045 PEKVELVI--GEEGEKVLYSQGVKLFRF-DAEVRQWKERGLGNLKI-LKNEVNGKPRMLM 1100
Query: 352 RARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE---GKSGLSTFALKFRDASIVE 408
R ++ N + M L + G A + SA++ G + L A KF+ + E
Sbjct: 1101 RREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFSDGDAKLERLAAKFKTPELAE 1158
Query: 409 EFQ 411
EF+
Sbjct: 1159 EFK 1161
Score = 46 (21.3 bits), Expect = 7.6e-05, Sum P(2) = 7.5e-05
Identities = 22/99 (22%), Positives = 39/99 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+ EKE S + + +N G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQ-EKE-SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 976
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 977 KSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKA 1015
Score = 43 (20.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 17/71 (23%), Positives = 28/71 (39%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK- 154
T + TE +S++ S+ + D K G K+SE ++ +A +K
Sbjct: 899 TKGSSNTEF-KSTKEGFSIPVSADGFKFGISEPGNQEKESEKPLENDTGFQAQDISGQKN 957
Query: 155 GEDESSKQTES 165
G QT S
Sbjct: 958 GRGVIFGQTSS 968
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAA-S 149
K S A +L S K++ AN D K+ A K + D+ E + P VE
Sbjct: 994 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVIG 1053
Query: 150 SEPEK 154
E EK
Sbjct: 1054 EEGEK 1058
>UNIPROTKB|F1MXS1 [details] [associations]
symbol:RANBP2 "Putative peptidyl-prolyl cis-trans
isomerase" species:9913 "Bos taurus" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000156
InterPro:IPR001440 InterPro:IPR001876 InterPro:IPR002130
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 GO:GO:0006457
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270 GO:GO:0005622
Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00690000102083 IPI:IPI00837553
UniGene:Bt.4771 InterPro:IPR022011 Pfam:PF12185 CTD:5903 KO:K12172
OMA:GQWDCNV EMBL:DAAA02031034 RefSeq:NP_777017.1
Ensembl:ENSBTAT00000045527 GeneID:785768 KEGG:bta:785768
NextBio:20927487 Uniprot:F1MXS1
Length = 3035
Score = 156 (60.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 63/239 (26%), Positives = 108/239 (45%)
Query: 185 NGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFT-GLAGTGFS 243
+GA +E G T D + ++ ++ +N F G + TGF+
Sbjct: 2025 SGAPNTET-TGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNLFRFGESTTGFN 2083
Query: 244 TSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----PSM 297
F+F S + S S S G++N +S+ + + + E G F P
Sbjct: 2084 ---FSFKS-----ALSPSKSP---GKLNQSGASVGTDEDSDVTQEEERDGQHFEPVVPLP 2132
Query: 298 QEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARG 355
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2133 DLVEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKI-LQNYENKQVRIVMRRDQ 2191
Query: 356 NYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F+
Sbjct: 2192 VLKLCANHRITPDMTLQNMKGTERVWVWTAC--DFADGERKIEHLAVRFKLQDVADSFK 2248
Score = 148 (57.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 57/222 (25%), Positives = 105/222 (47%)
Query: 200 VDKPEN-EDEKETSHETTDXXXXXXXXXXXXTQN--AFTGLAGTGFSTSTFAFGSIPKDG 256
VDKP + KE ++T + +F LA + ++ FAFGS K+
Sbjct: 2629 VDKPVDLSTRKENDADSTSQVESKTVTFGFGSGPGLSFADLASS--NSGDFAFGSKDKNF 2686
Query: 257 SASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P--SMQEVVVETGEENEKVVF 313
+N T A+VFG + + +E F P S+ EV V++GEE+E+++F
Sbjct: 2687 QWAN-TGAAVFGAQSTSKVGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILF 2745
Query: 314 SADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKL 371
+ L+ + + S WKERG G++K+ T R+LMR +++ N + M+L
Sbjct: 2746 KERAKLYRWDREASQWKERGVGDIKILWHT-VKNYFRILMRRDQVFKVCANHVITKTMEL 2804
Query: 372 T--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
N+ + + + A +G++ + A++F+ + + F+
Sbjct: 2805 KPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEMADCFK 2845
Score = 137 (53.3 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1836 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1893
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1894 QVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1951
Score = 46 (21.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKID-EPVAVEAASSEPE 153
K S A +L S +K+ VD DA + EK D + I EPV E
Sbjct: 1784 KGFSGAGEKLFSSQSSKL-VD-KADACADLEKDDDAYKTEDSDDIHFEPVVQMPEKVELV 1841
Query: 154 KGEDE 158
GE++
Sbjct: 1842 TGEED 1846
Score = 46 (21.3 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 261 STSASVFGQVNNGNSSLFNTPATSIAS 287
S+SA +F Q G F +PAT I S
Sbjct: 928 SSSACMFSQDMYGPPLRFESPATGILS 954
Score = 41 (19.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 121 GKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSK 161
G +A+ G + +++ + EPV E GE++ +
Sbjct: 1149 GHDADGGSAQGDEEDDGPHFEPVVPLPDKIEVRTGEEDEEE 1189
>UNIPROTKB|F1SNB4 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 EMBL:CU856110
Ensembl:ENSSSCT00000018334 Uniprot:F1SNB4
Length = 432
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 42/120 (35%), Positives = 68/120 (56%)
Query: 270 VNNGNSSLFNTPATS-IASKSEGTTFPS----MQEVVVETGEENEKVVFSADSVLFEFLD 324
+N+ NS + +T S I S + ++ PS ++++ V TGEE E V + LF F
Sbjct: 218 INSPNSRIDSTKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNK 277
Query: 325 G--SWKERGKGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + AT ++RL+MR +G+ RLILN+ L+ M++ K +
Sbjct: 278 PAQSWIERGRGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNL 337
>UNIPROTKB|F1SNB5 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 EMBL:CU856110
Ensembl:ENSSSCT00000018333 Uniprot:F1SNB5
Length = 457
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 42/120 (35%), Positives = 68/120 (56%)
Query: 270 VNNGNSSLFNTPATS-IASKSEGTTFPS----MQEVVVETGEENEKVVFSADSVLFEFLD 324
+N+ NS + +T S I S + ++ PS ++++ V TGEE E V + LF F
Sbjct: 243 INSPNSRIDSTKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNK 302
Query: 325 G--SWKERGKGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + AT ++RL+MR +G+ RLILN+ L+ M++ K +
Sbjct: 303 PAQSWIERGRGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNL 362
>UNIPROTKB|F1SNB3 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 OMA:DCGTLQS EMBL:CU856110
Ensembl:ENSSSCT00000018335 Uniprot:F1SNB3
Length = 458
Score = 142 (55.0 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 42/120 (35%), Positives = 68/120 (56%)
Query: 270 VNNGNSSLFNTPATS-IASKSEGTTFPS----MQEVVVETGEENEKVVFSADSVLFEFLD 324
+N+ NS + +T S I S + ++ PS ++++ V TGEE E V + LF F
Sbjct: 244 INSPNSRIDSTKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNK 303
Query: 325 G--SWKERGKGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + AT ++RL+MR +G+ RLILN+ L+ M++ K +
Sbjct: 304 PAQSWIERGRGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNL 363
>ASPGD|ASPL0000030982 [details] [associations]
symbol:nup2 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 EMBL:BN001305
eggNOG:NOG12793 GO:GO:0046907 EMBL:AACD01000094 OrthoDB:EOG4ZSDCT
RefSeq:XP_663089.1 ProteinModelPortal:Q5B1U5 STRING:Q5B1U5
EnsemblFungi:CADANIAT00003603 GeneID:2871776 KEGG:ani:AN5485.2
HOGENOM:HOG000216662 OMA:TWKPNTP Uniprot:Q5B1U5
Length = 1383
Score = 138 (53.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 65/290 (22%), Positives = 112/290 (38%)
Query: 124 AEKGDGEDNKQSESKIDEPVAVEAASSEPEKGE--DESSKQTESKNEPXXXXXXXXXXXX 181
A +D K E +P++ S G S+ T + P
Sbjct: 1090 AASAQSQDKKPEEGSTPKPLSTNIFGSPTPAGSIFGNSTSATSGASTPSIFATGSSATKP 1149
Query: 182 XXENGAEKS---EVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLA 238
+N + + + + G+ + E T+ ++ + A G +
Sbjct: 1150 GSDNTWKPNTPIKFSSDSAPGLTLSA-KSETATAAPASESSNHHPTLFGAPSAGAQPGPS 1208
Query: 239 GTGFSTSTFAFGSIPKDGSA----SNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF 294
G T+ F+FG + GS+ S TS S G +S +T A A
Sbjct: 1209 GNE-GTAGFSFGGPSQPGSSFLTPSVLTSESQSRATTPGVTS--DTGAEDSADGDAQKPE 1265
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRAR 354
P + GEE+E +V + + +DGSW +G G L++ + T R+R+L+RA
Sbjct: 1266 PQVDLARSGAGEEDEDIVIETRARALKMVDGSWASQGVGFLRI-LKNRTTSRSRVLVRAD 1324
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFRDA 404
+ ++LNA L ++K T ++ I F + A EG + LK +A
Sbjct: 1325 PSGNVVLNARLMKEIKYT-VNGNNIQFL-VPKA-EGAPEMWALRLKAGEA 1371
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 42 KKATDEVLATRRIVKVRRNQTASTPSSN 69
++AT LA R+I VRR A TPS +
Sbjct: 10 QRATAAQLAARKIKDVRRRPRAGTPSGS 37
Score = 51 (23.0 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Query: 62 TASTPSSNPFAGI 74
TASTP SNPFA +
Sbjct: 114 TASTPVSNPFASM 126
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGE 130
S++ K + D ++DA A++ DG+
Sbjct: 693 SNKRKATGDDDSDASSPAKRVDGD 716
>UNIPROTKB|J9P0I5 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03003172
Ensembl:ENSCAFT00000046391 Uniprot:J9P0I5
Length = 483
Score = 138 (53.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 270 VNNGNSSLFNTPATS-IASKSEGTTFPS----MQEVVVETGEENEKVVFSADSVLFEF-- 322
V + NSS + S I S + ++ PS ++++ V TGEE E V + LF F
Sbjct: 277 VTSPNSSTHSIQRISLIESAAAFSSKPSPKCLLEKIDVVTGEEAEHNVLKINCKLFIFNK 336
Query: 323 LDGSWKERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + ++ T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 337 TTQSWIERGRGALRLNDTASSDCGTFQSRLIMRNQGSLRLILNSKLWTQMEIQRANHKNL 396
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 130 EDNKQSE-SKIDEPVAVEAASSEPEKGEDESSKQTESKNE 168
ED +Q E S I +P+ V A + K E S S++E
Sbjct: 25 EDQRQQEKSVIAQPIFVFAKREQTFKRPAEDSTYEASEHE 64
>UNIPROTKB|F1NGF7 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 OMA:DCGTLQS EMBL:AADN02052163
EMBL:AADN02052164 EMBL:AADN02052165 EMBL:AADN02052166
IPI:IPI00682157 Ensembl:ENSGALT00000034345 Uniprot:F1NGF7
Length = 448
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVN-VSTNATG--RARLLM 351
+ +V V TGEE E V + LF F L +W E+G+G L++N S+N G ++RL+M
Sbjct: 266 LDKVEVITGEEEEHNVLQINCKLFVFNKLSLTWIEKGRGSLRLNDTSSNKCGMLQSRLIM 325
Query: 352 RARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALKFR 402
R +G+ RLILN L+ M + + K + C + + + F ++ R
Sbjct: 326 RNQGSLRLILNTRLWGQMVIKRANSKSL---CFTATDQEDHSVQVFLIQAR 373
>UNIPROTKB|E1BCV6 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 CTD:202151 EMBL:DAAA02050642
EMBL:DAAA02050643 EMBL:DAAA02050644 IPI:IPI00693079
RefSeq:XP_002696422.1 RefSeq:XP_002702562.1 UniGene:Bt.60654
Ensembl:ENSBTAT00000011090 GeneID:100296398 KEGG:bta:100296398
Uniprot:E1BCV6
Length = 463
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 270 VNNGNSSLFNTPATSIASKSEGTTF-PS----MQEVVVETGEENEKVVFSADSVLFEF-- 322
VN+ NS S+ + +F PS ++++ + TGEE E V + LF F
Sbjct: 249 VNSPNSRTDTIENISLIESAAAFSFKPSPKCLLEKIDIITGEEAEHNVLEINCKLFRFNK 308
Query: 323 LDGSWKERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + + T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 309 TTQSWTERGRGALRLNDTARSDCGTFQSRLIMRNQGSLRLILNSKLWAQMEIQRANHKNL 368
>UNIPROTKB|G3MX58 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046907 "intracellular transport" evidence=IEA]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907
GeneTree:ENSGT00530000063644 OMA:DCGTLQS EMBL:DAAA02050642
EMBL:DAAA02050643 EMBL:DAAA02050644 Ensembl:ENSBTAT00000065667
Uniprot:G3MX58
Length = 484
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 270 VNNGNSSLFNTPATSIASKSEGTTF-PS----MQEVVVETGEENEKVVFSADSVLFEF-- 322
VN+ NS S+ + +F PS ++++ + TGEE E V + LF F
Sbjct: 270 VNSPNSRTDTIENISLIESAAAFSFKPSPKCLLEKIDIITGEEAEHNVLEINCKLFRFNK 329
Query: 323 LDGSWKERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + + T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 330 TTQSWTERGRGALRLNDTARSDCGTFQSRLIMRNQGSLRLILNSKLWAQMEIQRANHKNL 389
>WB|WBGene00003795 [details] [associations]
symbol:npp-9 species:6239 "Caenorhabditis elegans"
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0040039 "inductive cell migration"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0005643
"nuclear pore" evidence=IDA] InterPro:IPR000156 InterPro:IPR001876
Pfam:PF00638 PROSITE:PS50196 PROSITE:PS50199 SMART:SM00160
SMART:SM00547 GO:GO:0009792 GO:GO:0007052 GO:GO:0016246
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270 GO:GO:0005643
GO:GO:0040035 GO:GO:0040039 GO:GO:0046907 GO:GO:0040002
GO:GO:0006997 EMBL:Z34801 HSSP:P49792 GeneTree:ENSGT00690000102083
KO:K12172 GeneID:175443 KEGG:cel:CELE_F59A2.1 UCSC:F59A2.1b.1
CTD:175443 HOGENOM:HOG000125413 NextBio:888184 RefSeq:NP_871701.1
ProteinModelPortal:Q86G90 SMR:Q86G90 IntAct:Q86G90
MINT:MINT-1066564 STRING:Q86G90 PRIDE:Q86G90
EnsemblMetazoa:F59A2.1b.1 EnsemblMetazoa:F59A2.1b.2
EnsemblMetazoa:F59A2.1b.3 WormBase:F59A2.1b InParanoid:Q86G90
OMA:CEDFSED ArrayExpress:Q86G90 Uniprot:Q86G90
Length = 884
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 68/254 (26%), Positives = 114/254 (44%)
Query: 184 ENGAEKSEVDNGK--TAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTG 241
E+ K GK T P ++E + S ET T A + A +
Sbjct: 633 ESAFPKPTFSFGKQQTPSTTAPAKQEENKQS-ETPKSVFGSGFTSGGATFAALS--ANSA 689
Query: 242 FSTSTFAFGSIPK-DGSASNSTSASVFGQVNNGNSSLFNTPATS-----IASKSEGTTFP 295
S S F ++ K + AS+FG + N++L T ATS +G P
Sbjct: 690 KSGSIFDAANVKKAQEELAAQKKASIFG---SKNTTLNTTSATSHDGDETNEDGDGEYEP 746
Query: 296 SMQ--------EVV-VETGEENEKVVFSADSVLFEFLDG--SWKERGKGELKVNVSTNAT 344
++ ++V V+TGEE+E+V+FSA L+++ KERG G++K+ S +
Sbjct: 747 EVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIKLLKSND-- 804
Query: 345 GRARLLMRARGNYRLILNASLYPDMKLT---NMDKKGITFACINSATEGKSG-LSTFALK 400
+ R++MR ++L N + MKL+ N+ +TF C + + + + + F K
Sbjct: 805 NKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNV-LTFMCQDFSEDASNADPAIFTAK 863
Query: 401 FRDASIVEEFQTAV 414
F+D + F+TAV
Sbjct: 864 FKDEATAGAFKTAV 877
>UNIPROTKB|Q86G90 [details] [associations]
symbol:npp-9 "Protein NPP-9, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 InterPro:IPR001876 Pfam:PF00638
PROSITE:PS50196 PROSITE:PS50199 SMART:SM00160 SMART:SM00547
GO:GO:0009792 GO:GO:0007052 GO:GO:0016246 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008270 GO:GO:0005643 GO:GO:0040035
GO:GO:0040039 GO:GO:0046907 GO:GO:0040002 GO:GO:0006997 EMBL:Z34801
HSSP:P49792 GeneTree:ENSGT00690000102083 KO:K12172 GeneID:175443
KEGG:cel:CELE_F59A2.1 UCSC:F59A2.1b.1 CTD:175443
HOGENOM:HOG000125413 NextBio:888184 RefSeq:NP_871701.1
ProteinModelPortal:Q86G90 SMR:Q86G90 IntAct:Q86G90
MINT:MINT-1066564 STRING:Q86G90 PRIDE:Q86G90
EnsemblMetazoa:F59A2.1b.1 EnsemblMetazoa:F59A2.1b.2
EnsemblMetazoa:F59A2.1b.3 WormBase:F59A2.1b InParanoid:Q86G90
OMA:CEDFSED ArrayExpress:Q86G90 Uniprot:Q86G90
Length = 884
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 68/254 (26%), Positives = 114/254 (44%)
Query: 184 ENGAEKSEVDNGK--TAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTG 241
E+ K GK T P ++E + S ET T A + A +
Sbjct: 633 ESAFPKPTFSFGKQQTPSTTAPAKQEENKQS-ETPKSVFGSGFTSGGATFAALS--ANSA 689
Query: 242 FSTSTFAFGSIPK-DGSASNSTSASVFGQVNNGNSSLFNTPATS-----IASKSEGTTFP 295
S S F ++ K + AS+FG + N++L T ATS +G P
Sbjct: 690 KSGSIFDAANVKKAQEELAAQKKASIFG---SKNTTLNTTSATSHDGDETNEDGDGEYEP 746
Query: 296 SMQ--------EVV-VETGEENEKVVFSADSVLFEFLDG--SWKERGKGELKVNVSTNAT 344
++ ++V V+TGEE+E+V+FSA L+++ KERG G++K+ S +
Sbjct: 747 EVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIKLLKSND-- 804
Query: 345 GRARLLMRARGNYRLILNASLYPDMKLT---NMDKKGITFACINSATEGKSG-LSTFALK 400
+ R++MR ++L N + MKL+ N+ +TF C + + + + + F K
Sbjct: 805 NKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNV-LTFMCQDFSEDASNADPAIFTAK 863
Query: 401 FRDASIVEEFQTAV 414
F+D + F+TAV
Sbjct: 864 FKDEATAGAFKTAV 877
>UNIPROTKB|Q5F473 [details] [associations]
symbol:NUP50 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0046907
"intracellular transport" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643
GO:GO:0046907 CTD:10762 eggNOG:NOG255247 HOVERGEN:HBG052697
KO:K14295 OMA:ECKGGDE OrthoDB:EOG4VX25D HOGENOM:HOG000007919
GeneTree:ENSGT00440000035348 EMBL:AADN02006731 EMBL:AJ851427
IPI:IPI00601091 RefSeq:NP_001012559.1 UniGene:Gga.16654 SMR:Q5F473
STRING:Q5F473 Ensembl:ENSGALT00000022998 GeneID:418240
KEGG:gga:418240 InParanoid:Q5F473 NextBio:20821439 Uniprot:Q5F473
Length = 468
Score = 107 (42.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 42/190 (22%), Positives = 78/190 (41%)
Query: 205 NEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSA 264
N ++ S + T+ T + +G S+ +FGS + + + +
Sbjct: 243 NNKTEDASDKKTEAASEKRDPSIGATSTVSFNIGKSGHSSGLSSFGSGTRSSFSFSPGNP 302
Query: 265 SVFGQ-VNNGNSSL-FNTPATSIASKSEGTTFPSMQE-------VVVETGEENEKVVFSA 315
+FG+ N S+ +T A ++S +E V+V +E++ +S
Sbjct: 303 GLFGKDANQAKSATAVSTNALEAQTESGNNDDKGGEEEEEEPPKVIVNEIKEDD-AFYSK 361
Query: 316 DSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY-RLILNASLYPDMKLTNM 374
LF D +KE+G G L + + N + +LL+RA N ++LN + P M T
Sbjct: 362 KCKLFYKKDNEFKEKGVGTLHLKPAGNE--KTQLLVRADTNLGNILLNVLIPPKMPCTRT 419
Query: 375 DKKGITFACI 384
K + C+
Sbjct: 420 GKNNVLIVCV 429
Score = 73 (30.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 39 GTFKKATDEVLATRRIVKVRRNQTASTPSSN-PFAGIR 75
GTF A++EVL R I K +R AS P S F G +
Sbjct: 25 GTFSVASEEVLKNRAIKKAKRQNVASEPESRGAFKGFK 62
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 117 NNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNE 168
++D+G E E + + + + + + K ED S K+TE+ +E
Sbjct: 208 SSDSGSENESNKTPGTQSASTFGNSKLQQGSTFLFNNKTEDASDKKTEAASE 259
>UNIPROTKB|F1SU29 [details] [associations]
symbol:RANBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0003755 "peptidyl-prolyl
cis-trans isomerase activity" evidence=IEA] [GO:0046907
"intracellular transport" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000156 InterPro:IPR001876
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00638
Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS01358
PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199 SMART:SM00160
SMART:SM00547 GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0008270 GO:GO:0005622 GO:GO:0046907 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00690000102083
InterPro:IPR022011 Pfam:PF12185 OMA:GQWDCNV EMBL:CU861624
Ensembl:ENSSSCT00000008913 Uniprot:F1SU29
Length = 2808
Score = 146 (56.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 63/237 (26%), Positives = 107/237 (45%)
Query: 186 GA-EKSEVDNGKTAGVDKP-ENEDEKETSHETTDXXXXXXXXXXXXT---QNAFT-GLAG 239
GA E S N + G +N D +E + +T+ + +N F G +
Sbjct: 1792 GALEASSTPNPEAPGPALEWDNYDLREDALDTSVSSSSVHASPLASSPVKKNLFRFGEST 1851
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQE 299
TGF+ S + S K + N + ASV G + +S + P + E
Sbjct: 1852 TGFNFSFKSALSPSKSPAKLNQSGASV-G--TDEDSDVTQEEERDGQHFEPVVPLPDLVE 1908
Query: 300 VVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNY 357
V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1909 V--SSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVL 1965
Query: 358 RLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+L N + PDM L +M ++ + AC +G+ + A++F+ + + F+
Sbjct: 1966 KLCANHRITPDMTLQSMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSFK 2020
Score = 142 (55.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 56/222 (25%), Positives = 101/222 (45%)
Query: 201 DKP---ENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGS 257
DKP + E + E T +F LA + ++ FAFGS K+
Sbjct: 2402 DKPVDLSTKKESDADSENQVDSTTVSFGFGSSTGLSFADLASS--NSGDFAFGSKDKNFQ 2459
Query: 258 ASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P--SMQEVVVETGEENEKVVFS 314
+N T A+VF + + +E F P S+ EV V++GEE+E+V+F
Sbjct: 2460 WAN-TGAAVFRAQSTSRGGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEVLFK 2518
Query: 315 ADSVLFEFLD---GSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKL 371
+ L+ + D WKERG G++K+ T + R+LMR +++ N + M+L
Sbjct: 2519 ERAKLYRW-DREVSQWKERGVGDIKILWHTMKS-YYRILMRRDQVFKVCANHVITKTMEL 2576
Query: 372 T--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
N+ + + + A +G++ + A++F+ + + F+
Sbjct: 2577 KPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEMADCFK 2617
Score = 137 (53.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1608 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1665
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1666 QVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1723
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 105 LESSENKVSVDANNDAGKEAEKGDGED--NKQSESKIDEPVAVEAASSEPEKGEDESSKQ 162
L+++ ++ S A + +G+ E G ++ N +D V + +S + + K+
Sbjct: 2141 LKNNSSEASPAAQSGSGRRVEPGGCQESQNPSLRPSLDGGVGAPSPASTKAESSGQKDKK 2200
Query: 163 TESKNE 168
T+ K E
Sbjct: 2201 TKKKTE 2206
Score = 40 (19.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 185 NGAEKSEVDNGKTAGVDKPENEDEKE 210
+GA + N T V +P + D K+
Sbjct: 951 SGANTATTTNQATRSVKEPTSHDSKD 976
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 261 STSASVFGQVNNGNSSLFNTPATSIAS 287
S+SA +F Q F +PAT I S
Sbjct: 575 SSSACMFSQEVYAPPLRFESPATGILS 601
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/74 (20%), Positives = 24/74 (32%)
Query: 132 NKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSE 191
N SE+ P A + E G + S+ + E+ +K +
Sbjct: 2143 NNSSEAS---PAAQSGSGRRVEPGGCQESQNPSLRPSLDGGVGAPSPASTKAESSGQKDK 2199
Query: 192 VDNGKTAGVDKPEN 205
KT KPE+
Sbjct: 2200 KTKKKTEEKKKPED 2213
>UNIPROTKB|E9PGT0 [details] [associations]
symbol:RANBP2 "Putative peptidyl-prolyl cis-trans
isomerase" species:9606 "Homo sapiens" [GO:0046907 "intracellular
transport" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] InterPro:IPR000156 InterPro:IPR001440
InterPro:IPR002130 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515
Pfam:PF00638 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50005
PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50293 SMART:SM00160
GO:GO:0006457 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 EMBL:AC010095 InterPro:IPR022011 Pfam:PF12185
HGNC:HGNC:9848 ChiTaRS:RANBP2 IPI:IPI00915960
ProteinModelPortal:E9PGT0 SMR:E9PGT0 Ensembl:ENST00000409491
ArrayExpress:E9PGT0 Bgee:E9PGT0 Uniprot:E9PGT0
Length = 2248
Score = 150 (57.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 75/305 (24%), Positives = 132/305 (43%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ E A S+ E E + T+S
Sbjct: 1768 DEDNGNGEDFQSELQKVQE-----AQKSQTE----EITSTTDSVYTGGTEVMVPSFCKSE 1818
Query: 183 XENGAEKS-EVDNGKTAGVDKPEN-EDEKETSHETTDXXXXXXXXXX--XXTQNAFTGLA 238
+ KS + + +DKP + KE ++T T +F LA
Sbjct: 1819 EPDSITKSISSPSVSSETMDKPVDLSTRKEIDTDSTSQGESKIVSFGFGSSTGLSFADLA 1878
Query: 239 GTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASK-----SEGTT 293
+ ++ FAFGS K+ +N T A+VFG + G S S +E
Sbjct: 1879 SS--NSGDFAFGSKDKNFQWAN-TGAAVFGTQSVGTQSAGKVGEDEDGSDEEVVHNEDIH 1935
Query: 294 F-P--SMQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRAR 348
F P S+ EV V++GEE+E+++F + L+ + D S WKERG G++K+ T R
Sbjct: 1936 FEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHT-MKNYYR 1994
Query: 349 LLMRARGNYRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASI 406
+LMR +++ N + M+L N+ + + + A +G++ + A++F+ +
Sbjct: 1995 ILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEV 2053
Query: 407 VEEFQ 411
+ F+
Sbjct: 2054 ADCFK 2058
Score = 147 (56.8 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 1284 FGESTTGFNFSFKSALSPSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 1339
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1340 LPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 1398
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1399 DQVLKLCANHRITPDMTLQNMKGTERVWLWTAC--DFADGERKVEHLAVRFKLQDVADSF 1456
Query: 411 Q 411
+
Sbjct: 1457 K 1457
Score = 141 (54.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 59/199 (29%), Positives = 92/199 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD----GSASNSTSASVFGQV-NNGNSSL-FNTP 281
T + FT A STS F FG + A +S +G++ N N+S F
Sbjct: 965 TSSTFT-FADLAKSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKD 1023
Query: 282 ATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKG 333
+ ++ S+ F P +Q +V + TGEE+EKV++S LF F D WKERG G
Sbjct: 1024 DDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRF-DAEVSQWKERGLG 1082
Query: 334 ELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKS 392
LK+ + G+ R+LMR ++ N + M L + + + S ++G +
Sbjct: 1083 NLKI-LKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDA 1141
Query: 393 GLSTFALKFRDASIVEEFQ 411
L A KF+ + EEF+
Sbjct: 1142 KLEQLAAKFKTPELAEEFK 1160
Score = 45 (20.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 993 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1052
Query: 151 EPEK 154
E ++
Sbjct: 1053 EEDE 1056
>UNIPROTKB|F1PS89 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03003172
Ensembl:ENSCAFT00000029705 Uniprot:F1PS89
Length = 436
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 270 VNNGNSSLFNTPATS-IASKSEGTTFPS----MQEVVVETGEENEKVVFSADSVLFEF-- 322
V + NSS + S I S + ++ PS ++++ V TGEE E V + LF F
Sbjct: 222 VTSPNSSTHSIQRISLIESAAAFSSKPSPKCLLEKIDVVTGEEAEHNVLKINCKLFIFNK 281
Query: 323 LDGSWKERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + ++ T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 282 TTQSWIERGRGALRLNDTASSDCGTFQSRLIMRNQGSLRLILNSKLWTQMEIQRANHKNL 341
>UNIPROTKB|F1PS90 [details] [associations]
symbol:RANBP3L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622
GO:GO:0046907 GeneTree:ENSGT00530000063644 EMBL:AAEX03003172
Ensembl:ENSCAFT00000029704 Uniprot:F1PS90
Length = 491
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 270 VNNGNSSLFNTPATS-IASKSEGTTFPS----MQEVVVETGEENEKVVFSADSVLFEF-- 322
V + NSS + S I S + ++ PS ++++ V TGEE E V + LF F
Sbjct: 277 VTSPNSSTHSIQRISLIESAAAFSSKPSPKCLLEKIDVVTGEEAEHNVLKINCKLFIFNK 336
Query: 323 LDGSWKERGKGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
SW ERG+G L++N + ++ T ++RL+MR +G+ RLILN+ L+ M++ + K +
Sbjct: 337 TTQSWIERGRGALRLNDTASSDCGTFQSRLIMRNQGSLRLILNSKLWTQMEIQRANHKNL 396
>MGI|MGI:2444654 [details] [associations]
symbol:Ranbp3l "RAN binding protein 3-like" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 MGI:MGI:2444654 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 GO:GO:0046907 HOVERGEN:HBG061383
GeneTree:ENSGT00530000063644 HOGENOM:HOG000290662 HSSP:Q9H6Z4
CTD:202151 eggNOG:NOG294696 OrthoDB:EOG4868CP EMBL:AK132406
EMBL:BC058706 IPI:IPI00381372 IPI:IPI00877309 RefSeq:NP_932141.1
UniGene:Mm.321371 UniGene:Mm.418007 ProteinModelPortal:Q6PDH4
SMR:Q6PDH4 PhosphoSite:Q6PDH4 PRIDE:Q6PDH4
Ensembl:ENSMUST00000166524 GeneID:223332 KEGG:mmu:223332
UCSC:uc007vfb.1 NextBio:376693 Bgee:Q6PDH4 CleanEx:MM_RANBP3L
Genevestigator:Q6PDH4 Uniprot:Q6PDH4
Length = 491
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 274 NSSLFNTPATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERG 331
N SL + A + +SK ++++ V TGEE E V + +F F SW ERG
Sbjct: 289 NISLVES-AAAFSSKPSQKCL--LEKIDVITGEETEHNVLKINCKIFVFNKATESWSERG 345
Query: 332 KGELKVNVSTN---ATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSAT 388
+G L++N + T ++RL+MR +G+ RL+LN+ L+ MK+ +K + +
Sbjct: 346 QGILRLNDTAGRECGTLQSRLIMRNQGSLRLVLNSRLWAQMKIQRASQKNLRITATDLED 405
Query: 389 EG 390
+G
Sbjct: 406 DG 407
>UNIPROTKB|P49792 [details] [associations]
symbol:RANBP2 "E3 SUMO-protein ligase RanBP2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0016925 "protein sumoylation" evidence=IEA;IDA]
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0044615 "nuclear pore nuclear basket"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0042405 "nuclear inclusion body" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=TAS] [GO:0008536 "Ran GTPase
binding" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR000156 InterPro:IPR001440 InterPro:IPR001876
InterPro:IPR002130 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00515
Pfam:PF00638 Pfam:PF00641 PRINTS:PR00153 PROSITE:PS00170
PROSITE:PS01358 PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196
PROSITE:PS50199 PROSITE:PS50293 SMART:SM00160 SMART:SM00547
UniPathway:UPA00886 GO:GO:0005829
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0006457
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0044281 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 GO:GO:0016874 GO:GO:0005975
GO:GO:0008270 GO:GO:0005643 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0006606 Gene3D:1.25.40.10
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0051028
GO:GO:0000236 GO:GO:0016925 GO:GO:0008536 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 Orphanet:263524
Pathway_Interaction_DB:ranbp2pathway EMBL:AC010095 eggNOG:COG5171
PDB:1Z5S PDB:3UIN PDB:3UIO PDB:3UIP PDBsum:1Z5S PDBsum:3UIN
PDBsum:3UIO PDBsum:3UIP PDB:1RRP PDBsum:1RRP HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 InterPro:IPR022011 Pfam:PF12185 EMBL:L41840
EMBL:D42063 EMBL:AB209483 EMBL:U19248 IPI:IPI00221325 PIR:S58884
RefSeq:NP_006258.3 UniGene:Hs.199561 UniGene:Hs.715056 PDB:1XKE
PDB:4GA0 PDBsum:1XKE PDBsum:4GA0 ProteinModelPortal:P49792
SMR:P49792 DIP:DIP-37654N IntAct:P49792 MINT:MINT-191403
STRING:P49792 PhosphoSite:P49792 DMDM:83305554 OGP:P49792
PaxDb:P49792 PeptideAtlas:P49792 PRIDE:P49792
Ensembl:ENST00000283195 GeneID:5903 KEGG:hsa:5903 UCSC:uc002tem.4
CTD:5903 GeneCards:GC02P109335 H-InvDB:HIX0002358 HGNC:HGNC:9848
MIM:601181 MIM:608033 neXtProt:NX_P49792 Orphanet:88619
PharmGKB:PA34209 HOVERGEN:HBG092361 InParanoid:P49792 KO:K12172
OMA:SATKCIA PhylomeDB:P49792 ChiTaRS:RANBP2
EvolutionaryTrace:P49792 GenomeRNAi:5903 NextBio:22964
ArrayExpress:P49792 Bgee:P49792 CleanEx:HS_RANBP2
Genevestigator:P49792 GermOnline:ENSG00000153201 Uniprot:P49792
Length = 3224
Score = 150 (57.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 75/305 (24%), Positives = 132/305 (43%)
Query: 123 EAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXX 182
+ + G+GED + K+ E A S+ E E + T+S
Sbjct: 2744 DEDNGNGEDFQSELQKVQE-----AQKSQTE----EITSTTDSVYTGGTEVMVPSFCKSE 2794
Query: 183 XENGAEKS-EVDNGKTAGVDKPEN-EDEKETSHETTDXXXXXXXXXX--XXTQNAFTGLA 238
+ KS + + +DKP + KE ++T T +F LA
Sbjct: 2795 EPDSITKSISSPSVSSETMDKPVDLSTRKEIDTDSTSQGESKIVSFGFGSSTGLSFADLA 2854
Query: 239 GTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASK-----SEGTT 293
+ ++ FAFGS K+ +N T A+VFG + G S S +E
Sbjct: 2855 SS--NSGDFAFGSKDKNFQWAN-TGAAVFGTQSVGTQSAGKVGEDEDGSDEEVVHNEDIH 2911
Query: 294 F-P--SMQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRAR 348
F P S+ EV V++GEE+E+++F + L+ + D S WKERG G++K+ T R
Sbjct: 2912 FEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHT-MKNYYR 2970
Query: 349 LLMRARGNYRLILNASLYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASI 406
+LMR +++ N + M+L N+ + + + A +G++ + A++F+ +
Sbjct: 2971 ILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYA-DGEAKVEQLAVRFKTKEV 3029
Query: 407 VEEFQ 411
+ F+
Sbjct: 3030 ADCFK 3034
Score = 147 (56.8 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 2260 FGESTTGFNFSFKSALSPSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 2315
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2316 LPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 2374
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 2375 DQVLKLCANHRITPDMTLQNMKGTERVWLWTAC--DFADGERKVEHLAVRFKLQDVADSF 2432
Query: 411 Q 411
+
Sbjct: 2433 K 2433
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 59/199 (29%), Positives = 92/199 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD----GSASNSTSASVFGQV-NNGNSSL-FNTP 281
T + FT A STS F FG + A +S +G++ N N+S F
Sbjct: 1941 TSSTFT-FADLAKSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQYGKMANKANTSGDFEKD 1999
Query: 282 ATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKG 333
+ ++ S+ F P +Q +V + TGEE+EKV++S LF F D WKERG G
Sbjct: 2000 DDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRF-DAEVSQWKERGLG 2058
Query: 334 ELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKS 392
LK+ + G+ R+LMR ++ N + M L + + + S ++G +
Sbjct: 2059 NLKI-LKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDA 2117
Query: 393 GLSTFALKFRDASIVEEFQ 411
L A KF+ + EEF+
Sbjct: 2118 KLEQLAAKFKTPELAEEFK 2136
Score = 129 (50.5 bits), Expect = 0.00027, P = 0.00027
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMR 352
P ++ V+TGEE+E+ F + LF F ++ WKERG G +K+ + +G+ RLLMR
Sbjct: 1177 PLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKI-LRHKTSGKIRLLMR 1235
Query: 353 ARGNYRLILNASLYPDMKLT 372
++ N + PDMKLT
Sbjct: 1236 REQVLKICANHYISPDMKLT 1255
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 1969 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 2028
Query: 151 EPEK 154
E ++
Sbjct: 2029 EEDE 2032
>UNIPROTKB|Q6AYL1 [details] [associations]
symbol:Npap60 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638
Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 RGD:3191
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643 GO:GO:0046907
EMBL:CH473957 eggNOG:NOG255247 HOVERGEN:HBG052697 UniGene:Rn.123156
UniGene:Rn.3242 HOGENOM:HOG000007919 GeneTree:ENSGT00440000035348
EMBL:BC079001 IPI:IPI00390251 SMR:Q6AYL1 Ensembl:ENSRNOT00000039549
InParanoid:Q6AYL1 OMA:EESAFYC OrthoDB:EOG4RV2T8
Genevestigator:Q6AYL1 Uniprot:Q6AYL1
Length = 436
Score = 129 (50.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 41/163 (25%), Positives = 77/163 (47%)
Query: 230 TQNAFTGLAGT-GFSTSTFAFGSI---PKDGSASNSTSASVFGQVNN----GNSSLFNTP 281
T T ++G G + T +GS+ P +G +S++ S+S+ G+ + ++ +P
Sbjct: 239 TAQGATSISGHFGKNIETPVWGSLNSGPTNGVSSSTKSSSLGGKGTSPRKPASAKALESP 298
Query: 282 ATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVST 341
+ + +G +E++VE E+ E + LF D +KE+G G L + +
Sbjct: 299 TQDSSEEGKGKRDEPPKELLVE--EKEESAFYCKKCKLFYKKDNEFKEKGVGTLYLKSTA 356
Query: 342 NATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACI 384
N + RLL++ ++LN + PDM T M K + C+
Sbjct: 357 NQ--KTRLLVQDTKLDNILLNILIPPDMPCTRMGKNNVLIVCV 397
Score = 47 (21.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 24/107 (22%), Positives = 40/107 (37%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR-LXXXXXXXXXXXXXXXXXXKT 96
GTF A+++VL R I + RR+ + GI+ L +
Sbjct: 23 GTFSLASEDVLKNRTIKRAKRRHARPQSEGKGTSKGIKNLAVPSGNGEFGGGPEEKPLEV 82
Query: 97 VSPAATELLESSENKV---SVDANNDAGKEAEKG-DGEDNKQSESKI 139
++ ++E K SV N + E+G D + N S+ I
Sbjct: 83 LTTRRNPARAAAEPKATLGSVSVNEPPSMDHEQGSDAQTNVHSQHPI 129
>UNIPROTKB|J3KQ37 [details] [associations]
symbol:RGPD8 "RANBP2-like and GRIP domain-containing
protein 8" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 HGNC:HGNC:9849 EMBL:AC115115 EMBL:AC112246
ProteinModelPortal:J3KQ37 Ensembl:ENST00000409750 Uniprot:J3KQ37
Length = 1625
Score = 145 (56.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 269 QVNNGNSSLFNTPATSIASKSE---GTTF----PSMQEVVVETGEENEKVVFSADSVLFE 321
++N +S+ T S+ ++ E G F P V V +GEENE+VVFS + ++
Sbjct: 1167 KLNQSGTSV-GTDEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYR 1225
Query: 322 F-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNM---DK 376
+ D G WKERG G++K+ + + R++MR +L N + PDM L NM ++
Sbjct: 1226 YDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTER 1284
Query: 377 KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+ AC +G+ + A++F+ + + F+
Sbjct: 1285 VWVWTAC--DFADGERKVEHLAVRFKLQDVADSFK 1317
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 64/203 (31%), Positives = 94/203 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD------GSASNSTSASVFGQV-NNGNSSL-FN 279
T + FT A STS F FG KD A +S +G++ N N+S F
Sbjct: 825 TSSTFT-FADVAKSTSGEGFQFGK--KDLNFKGFSGAGEKLFSSRYGKMANKANTSGDFE 881
Query: 280 TPATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERG 331
+ ++ S+ F P +Q +V + TGEE EKV++S LF F D WKERG
Sbjct: 882 KDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEVRQWKERG 940
Query: 332 KGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE-- 389
G LK+ + G+ R+LMR ++ N + M L + G A + SA++
Sbjct: 941 LGNLKI-LKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFS 997
Query: 390 -GKSGLSTFALKFRDASIVEEFQ 411
G + L A KF+ + EEF+
Sbjct: 998 DGDAKLERLAAKFKTPELAEEFK 1020
Score = 43 (20.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 853 KGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 912
Query: 151 EPEKGE 156
E +GE
Sbjct: 913 E--EGE 916
>UNIPROTKB|P0DJD0 [details] [associations]
symbol:RGPD1 "RANBP2-like and GRIP domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 EMBL:AC111200
GO:GO:0000042 Gene3D:1.10.220.60 EMBL:CR749330
RefSeq:NP_001019628.3 UniGene:Hs.728970 ProteinModelPortal:P0DJD0
SMR:P0DJD0 PRIDE:P0DJD0 Ensembl:ENST00000409776
Ensembl:ENST00000559485 GeneID:400966 KEGG:hsa:400966 CTD:400966
GeneCards:GC02P087135 HGNC:HGNC:32414 MIM:612704 neXtProt:NX_P0DJD0
ChiTaRS:RGPD1 GenomeRNAi:400966 Bgee:P0DJD0 Uniprot:P0DJD0
Length = 1748
Score = 148 (57.2 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 1269 FDESTTGFNFSFKSALSLSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 1324
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1325 LPDLVEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 1383
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1384 DQVLKLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSF 1441
Query: 411 Q 411
+
Sbjct: 1442 K 1442
Score = 132 (51.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1030 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1087
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1088 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1145
Score = 46 (21.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 20/99 (20%), Positives = 39/99 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 905 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 960
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 961 KSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKA 999
Score = 40 (19.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 978 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1037
Query: 151 EPEKGE 156
E +GE
Sbjct: 1038 E--EGE 1041
>UNIPROTKB|F8VYC4 [details] [associations]
symbol:RGPD1 "RANBP2-like and GRIP domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 EMBL:AC111200
GO:GO:0000042 Gene3D:1.10.220.60 HGNC:HGNC:32414 ChiTaRS:RGPD1
IPI:IPI00956752 ProteinModelPortal:F8VYC4 SMR:F8VYC4 PRIDE:F8VYC4
Ensembl:ENST00000398193 OMA:NIESICQ ArrayExpress:F8VYC4 Bgee:F8VYC4
Uniprot:F8VYC4
Length = 1756
Score = 148 (57.2 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 1277 FDESTTGFNFSFKSALSLSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 1332
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1333 LPDLVEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 1391
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1392 DQVLKLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSF 1449
Query: 411 Q 411
+
Sbjct: 1450 K 1450
Score = 132 (51.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1038 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1095
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1096 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1153
Score = 46 (21.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 20/99 (20%), Positives = 39/99 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 913 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 968
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 969 KSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKA 1007
Score = 40 (19.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 986 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1045
Query: 151 EPEKGE 156
E +GE
Sbjct: 1046 E--EGE 1049
>UNIPROTKB|Q99666 [details] [associations]
symbol:RGPD5 "RANBP2-like and GRIP domain-containing
protein 5/6" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000156 InterPro:IPR000237
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638 Pfam:PF01465
PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293 PROSITE:PS50913
SMART:SM00160 SMART:SM00755 GO:GO:0005737 Gene3D:2.30.29.30
InterPro:IPR011993 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 UniGene:Hs.469630 EMBL:AC108938 EMBL:AC013271
eggNOG:COG5171 HOGENOM:HOG000089994 OrthoDB:EOG4J3WG2
HOVERGEN:HBG108404 EMBL:U64675 EMBL:AL136868 EMBL:AC123886
EMBL:AC109815 EMBL:AB209082 IPI:IPI00100787 IPI:IPI00293568
RefSeq:NP_001032955.1 RefSeq:NP_001116835.1 RefSeq:NP_005045.2
RefSeq:NP_115636.1 UniGene:Hs.645445 ProteinModelPortal:Q99666
SMR:Q99666 IntAct:Q99666 STRING:Q99666 PhosphoSite:Q99666
PaxDb:Q99666 PRIDE:Q99666 DNASU:729540 DNASU:84220
Ensembl:ENST00000016946 Ensembl:ENST00000272454
Ensembl:ENST00000329516 Ensembl:ENST00000330331
Ensembl:ENST00000393283 GeneID:729540 GeneID:84220 KEGG:hsa:729540
KEGG:hsa:84220 UCSC:uc002tfc.3 UCSC:uc002tfe.1 CTD:729540 CTD:84220
GeneCards:GC02M111271 GeneCards:GC02P110550 HGNC:HGNC:32418
HGNC:HGNC:32419 MIM:612708 MIM:612709 MIM:612710 neXtProt:NX_Q99666
PharmGKB:PA142671074 InParanoid:Q53T03 PhylomeDB:Q99666
ChiTaRS:RGPD5 NextBio:130592 ArrayExpress:Q99666 Bgee:Q99666
CleanEx:HS_RGPD5 CleanEx:HS_RGPD8 Genevestigator:Q99666
GermOnline:ENSG00000015568 GermOnline:ENSG00000183054
Uniprot:Q99666
Length = 1765
Score = 145 (56.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 269 QVNNGNSSLFNTPATSIASKSE---GTTF----PSMQEVVVETGEENEKVVFSADSVLFE 321
++N +S+ T S+ ++ E G F P V V +GEENE+VVFS + ++
Sbjct: 1307 KLNQSGTSV-GTDEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYR 1365
Query: 322 F-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNM---DK 376
+ D G WKERG G++K+ + + R++MR +L N + PDM L NM ++
Sbjct: 1366 YDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTER 1424
Query: 377 KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+ AC +G+ + A++F+ + + F+
Sbjct: 1425 VWVWTAC--DFADGERKVEHLAVRFKLQDVADSFK 1457
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/203 (31%), Positives = 94/203 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD------GSASNSTSASVFGQV-NNGNSSL-FN 279
T + FT A STS F FG KD A +S +G++ N N+S F
Sbjct: 965 TSSTFT-FADVAKSTSGEGFQFGK--KDLNFKGFSGAGEKLFSSRYGKMANKANTSGDFE 1021
Query: 280 TPATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERG 331
+ ++ S+ F P +Q +V + TGEE EKV++S LF F D WKERG
Sbjct: 1022 KDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEVRQWKERG 1080
Query: 332 KGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE-- 389
G LK+ + G+ R+LMR ++ N + M L + G A + SA++
Sbjct: 1081 LGNLKI-LKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFS 1137
Query: 390 -GKSGLSTFALKFRDASIVEEFQ 411
G + L A KF+ + EEF+
Sbjct: 1138 DGDAKLERLAAKFKTPELAEEFK 1160
Score = 43 (20.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 993 KGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1052
Query: 151 EPEKGE 156
E +GE
Sbjct: 1053 E--EGE 1056
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K D + G+ G ++STF F +
Sbjct: 920 DGFKFGISEPGNQEKKREKPLENDTGFQAQDISG---RKKGRGVI-FGQTSSTFTFADVA 975
Query: 254 KDGS 257
K S
Sbjct: 976 KSTS 979
>UNIPROTKB|O14715 [details] [associations]
symbol:RGPD8 "RANBP2-like and GRIP domain-containing
protein 8" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] [GO:0008536 "Ran GTPase binding"
evidence=NAS] [GO:0005643 "nuclear pore" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005643 Gene3D:1.25.40.10 GO:GO:0008536
GO:GO:0000042 Gene3D:1.10.220.60 UniGene:Hs.469630
HOGENOM:HOG000089994 OrthoDB:EOG4J3WG2 HOVERGEN:HBG108404
CleanEx:HS_RGPD8 EMBL:AF012086 EMBL:CR936614 IPI:IPI00956184
RefSeq:NP_001157935.1 UniGene:Hs.535589 ProteinModelPortal:O14715
SMR:O14715 IntAct:O14715 STRING:O14715 PhosphoSite:O14715
PRIDE:O14715 Ensembl:ENST00000302558 GeneID:727851 KEGG:hsa:727851
UCSC:uc002tht.1 CTD:727851 GeneCards:GC02M113125 H-InvDB:HIX0029791
HGNC:HGNC:9849 MIM:602752 neXtProt:NX_O14715 PharmGKB:PA34210
InParanoid:O14715 PhylomeDB:O14715 GenomeRNAi:727851 NextBio:125308
ArrayExpress:O14715 Bgee:O14715 Genevestigator:O14715
GermOnline:ENSG00000169629 Uniprot:O14715
Length = 1765
Score = 145 (56.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 269 QVNNGNSSLFNTPATSIASKSE---GTTF----PSMQEVVVETGEENEKVVFSADSVLFE 321
++N +S+ T S+ ++ E G F P V V +GEENE+VVFS + ++
Sbjct: 1307 KLNQSGTSV-GTDEESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYR 1365
Query: 322 F-LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNM---DK 376
+ D G WKERG G++K+ + + R++MR +L N + PDM L NM ++
Sbjct: 1366 YDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTER 1424
Query: 377 KGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+ AC +G+ + A++F+ + + F+
Sbjct: 1425 VWVWTAC--DFADGERKVEHLAVRFKLQDVADSFK 1457
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/203 (31%), Positives = 94/203 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD------GSASNSTSASVFGQV-NNGNSSL-FN 279
T + FT A STS F FG KD A +S +G++ N N+S F
Sbjct: 965 TSSTFT-FADVAKSTSGEGFQFGK--KDLNFKGFSGAGEKLFSSRYGKMANKANTSGDFE 1021
Query: 280 TPATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERG 331
+ ++ S+ F P +Q +V + TGEE EKV++S LF F D WKERG
Sbjct: 1022 KDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEVRQWKERG 1080
Query: 332 KGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE-- 389
G LK+ + G+ R+LMR ++ N + M L + G A + SA++
Sbjct: 1081 LGNLKI-LKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFS 1137
Query: 390 -GKSGLSTFALKFRDASIVEEFQ 411
G + L A KF+ + EEF+
Sbjct: 1138 DGDAKLERLAAKFKTPELAEEFK 1160
Score = 43 (20.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 993 KGFSGAGEKLFSSRYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1052
Query: 151 EPEKGE 156
E +GE
Sbjct: 1053 E--EGE 1056
>UNIPROTKB|A6NKT7 [details] [associations]
symbol:RGPD3 "RanBP2-like and GRIP domain-containing
protein 3" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 eggNOG:COG5171 HOGENOM:HOG000089994
OrthoDB:EOG4J3WG2 EMBL:AC097527 EMBL:AC114755 IPI:IPI00921207
RefSeq:NP_001137485.1 UniGene:Hs.726367 ProteinModelPortal:A6NKT7
SMR:A6NKT7 STRING:A6NKT7 PhosphoSite:A6NKT7 PaxDb:A6NKT7
PRIDE:A6NKT7 Ensembl:ENST00000409886 GeneID:653489 KEGG:hsa:653489
UCSC:uc010ywi.1 CTD:653489 GeneCards:GC02M107007 H-InvDB:HIX0030036
HGNC:HGNC:32416 MIM:612706 neXtProt:NX_A6NKT7 PharmGKB:PA142671072
HOVERGEN:HBG108404 InParanoid:A6NKT7 GenomeRNAi:653489
NextBio:123313 ArrayExpress:A6NKT7 Bgee:A6NKT7 CleanEx:HS_RGPD3
Genevestigator:A6NKT7 Uniprot:A6NKT7
Length = 1758
Score = 144 (55.7 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 269 QVNNGNSSLFNTPATSIASKSE--GTTF----PSMQEVVVETGEENEKVVFSADSVLFEF 322
++N +S+ + + + E G F P V V +GEENE+VVFS + + +
Sbjct: 1308 KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEFYRY 1367
Query: 323 -LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNM---DKK 377
D G WKERG G++K+ + R+LMR +L N + PDM L NM ++
Sbjct: 1368 DKDVGQWKERGIGDIKI-LQNYDNKHVRILMRRDQVLKLCANHRITPDMSLQNMKGTERV 1426
Query: 378 GITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+ AC +G+ + A++F+ + + F+
Sbjct: 1427 WVWTAC--DFADGERKVEHLAVRFKLQDVADSFK 1458
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 63/203 (31%), Positives = 94/203 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD------GSASNSTSASVFGQV-NNGNSSL-FN 279
T + FT A STS F FG KD A +S +G++ N N+S F
Sbjct: 966 TSSTFT-FADVAKSTSGEGFQFGK--KDLNFKGFSGAGEKLFSSQYGKMANKANTSGDFE 1022
Query: 280 TPATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERG 331
+ ++ S+ F P +Q +V + TGEE EKV++S LF F D WKERG
Sbjct: 1023 KDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEVSQWKERG 1081
Query: 332 KGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE-- 389
G LK+ + G+ R+LM+ ++ N + M L + G A + SA++
Sbjct: 1082 LGNLKI-LKNEVNGKVRMLMQREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFS 1138
Query: 390 -GKSGLSTFALKFRDASIVEEFQ 411
G + L A KF+ + EEF+
Sbjct: 1139 DGDAKLERLAAKFKTPELAEEFK 1161
Score = 44 (20.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 994 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1053
Query: 151 EPEKGE 156
E +GE
Sbjct: 1054 E--EGE 1057
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/99 (19%), Positives = 36/99 (36%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K D + G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQEKKSEKPLENDTGLQAQDISG---RKKGRGVI-FGQTSSTFTFADVA 976
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 977 KSTSGEGFQFGKKDLNFKGFSGAGEKLFSSQYGKMANKA 1015
>UNIPROTKB|J3KNE0 [details] [associations]
symbol:RGPD3 "RanBP2-like and GRIP domain-containing
protein 3" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC097527 EMBL:AC114755 HGNC:HGNC:32416
ProteinModelPortal:J3KNE0 Ensembl:ENST00000304514 Uniprot:J3KNE0
Length = 1766
Score = 144 (55.7 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 269 QVNNGNSSLFNTPATSIASKSE--GTTF----PSMQEVVVETGEENEKVVFSADSVLFEF 322
++N +S+ + + + E G F P V V +GEENE+VVFS + + +
Sbjct: 1308 KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEFYRY 1367
Query: 323 -LD-GSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNM---DKK 377
D G WKERG G++K+ + R+LMR +L N + PDM L NM ++
Sbjct: 1368 DKDVGQWKERGIGDIKI-LQNYDNKHVRILMRRDQVLKLCANHRITPDMSLQNMKGTERV 1426
Query: 378 GITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+ AC +G+ + A++F+ + + F+
Sbjct: 1427 WVWTAC--DFADGERKVEHLAVRFKLQDVADSFK 1458
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 63/203 (31%), Positives = 94/203 (46%)
Query: 230 TQNAFTGLAGTGFSTST--FAFGSIPKD------GSASNSTSASVFGQV-NNGNSSL-FN 279
T + FT A STS F FG KD A +S +G++ N N+S F
Sbjct: 966 TSSTFT-FADVAKSTSGEGFQFGK--KDLNFKGFSGAGEKLFSSQYGKMANKANTSGDFE 1022
Query: 280 TPATSIASK-SEGTTF-PSMQ---EVVVETGEENEKVVFSADSVLFEFLDGS---WKERG 331
+ ++ S+ F P +Q +V + TGEE EKV++S LF F D WKERG
Sbjct: 1023 KDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEVSQWKERG 1081
Query: 332 KGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATE-- 389
G LK+ + G+ R+LM+ ++ N + M L + G A + SA++
Sbjct: 1082 LGNLKI-LKNEVNGKVRMLMQREQVLKVCANHWITTTMNLKPLS--GSDRAWMWSASDFS 1138
Query: 390 -GKSGLSTFALKFRDASIVEEFQ 411
G + L A KF+ + EEF+
Sbjct: 1139 DGDAKLERLAAKFKTPELAEEFK 1161
Score = 44 (20.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 20/66 (30%), Positives = 29/66 (43%)
Query: 95 KTVSPAATELLESSENKVSVDANN--DAGKE--AEKGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN D K+ A K + D+ E + P VE +
Sbjct: 994 KGFSGAGEKLFSSQYGKMANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTG 1053
Query: 151 EPEKGE 156
E +GE
Sbjct: 1054 E--EGE 1057
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 19/99 (19%), Positives = 36/99 (36%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K D + G+ G ++STF F +
Sbjct: 921 DGFKFGISEPGNQEKKSEKPLENDTGLQAQDISG---RKKGRGVI-FGQTSSTFTFADVA 976
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 977 KSTSGEGFQFGKKDLNFKGFSGAGEKLFSSQYGKMANKA 1015
>UNIPROTKB|E2QT37 [details] [associations]
symbol:NUP50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005643 GO:GO:0046907 OMA:ECKGGDE
GeneTree:ENSGT00440000035348 EMBL:AAEX03007232
Ensembl:ENSCAFT00000001337 Uniprot:E2QT37
Length = 460
Score = 114 (45.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 248 AFGSIPKDGSASNSTSASVFGQ---VNNGNSSLFNTPATSI-----ASKSEGTTFPSMQE 299
+ S P G + +S ++S+FG+ N SS F T + +S+ +G E
Sbjct: 277 SLNSGPLTGFSFSSGNSSLFGRDLTQNKSMSSPFYTKTLEVQPEGGSSECKGGDEEENDE 336
Query: 300 V--VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 357
VV T + E +S LF D +KE+G G L + + N + +LL+RA N
Sbjct: 337 PPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPTANQ--KTQLLVRADTNL 394
Query: 358 -RLILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLSTFALKFR 402
++LN + P+M T K + C+ N + K+ + + R
Sbjct: 395 GNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNAAAPVTMLIR 441
Score = 62 (26.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EVL R I K RRN + S F G +
Sbjct: 25 GTFSVASEEVLKNRAIKKAKRRNVGFESDSGGAFKGFK 62
>DICTYBASE|DDB_G0291444 [details] [associations]
symbol:DDB_G0291444 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0291444 Pfam:PF05022 EMBL:AAFI02000177
InterPro:IPR007718 RefSeq:XP_635213.1 STRING:Q54EM7
EnsemblProtists:DDB0183896 GeneID:8628159 KEGG:ddi:DDB_G0291444
eggNOG:NOG140707 InParanoid:Q54EM7 OMA:TICEESS Uniprot:Q54EM7
Length = 447
Score = 133 (51.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 39/199 (19%), Positives = 93/199 (46%)
Query: 111 KVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPX 170
K S D+++ + E++ D ED K+ E K+D+ ++SSE + E SS ++E + +
Sbjct: 80 KDSSDSSDSSDSESDSSDSEDEKEKEMKVDKKTEDSSSSSESDT-ESSSSSESEDEKKKE 138
Query: 171 XXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKET-SHETTDXXXXXXXXXXXX 229
++ + +SE ++ +++ + E+EDEK+ S +++D
Sbjct: 139 KESDDSSSSESESDSSSSESESESSESSSSSESESEDEKKKESSDSSDSESEDEKKKKVE 198
Query: 230 TQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKS 289
+ ++ + + + S+ + + K +S+S+S+ ++ + S ++ + S K
Sbjct: 199 SSDSSSSESESSDSSDSESEDEKKKKVESSDSSSSESESSSSSSSDSSDSSDSESEDEKK 258
Query: 290 EGTTFPSMQEVVVETGEEN 308
+ S +E E+ E+
Sbjct: 259 KKVEKSSDKETSSESESED 277
>UNIPROTKB|J3QTV4 [details] [associations]
symbol:RGPD2 "RANBP2-like and GRIP domain-containing
protein 2" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC093616 HGNC:HGNC:32415 ChiTaRS:RGPD2
EMBL:AC108479 EMBL:AC109354 ProteinModelPortal:J3QTV4
Ensembl:ENST00000420840 Uniprot:J3QTV4
Length = 1748
Score = 147 (56.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 1269 FDESTTGFNFSFKSALSLSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 1324
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1325 LPDLVEVSSGEENEQVVFSHMAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 1383
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1384 DQVLKLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSF 1441
Query: 411 Q 411
+
Sbjct: 1442 K 1442
Score = 132 (51.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1030 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1087
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1088 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1145
Score = 46 (21.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 20/99 (20%), Positives = 39/99 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 905 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 960
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 961 KSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKA 999
Score = 40 (19.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 978 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1037
Query: 151 EPEKGE 156
E +GE
Sbjct: 1038 E--EGE 1041
>UNIPROTKB|P0DJD1 [details] [associations]
symbol:RGPD2 "RANBP2-like and GRIP domain-containing
protein 2" species:9606 "Homo sapiens" [GO:0000042 "protein
targeting to Golgi" evidence=IEA] InterPro:IPR000156
InterPro:IPR000237 InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF00638
Pfam:PF01465 PROSITE:PS50005 PROSITE:PS50196 PROSITE:PS50293
PROSITE:PS50913 SMART:SM00160 SMART:SM00755 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0000042
Gene3D:1.10.220.60 EMBL:AC093616 UniGene:Hs.728970 EMBL:AY354203
RefSeq:NP_001071638.2 UniGene:Hs.652430 ProteinModelPortal:P0DJD1
SMR:P0DJD1 PRIDE:P0DJD1 Ensembl:ENST00000327544
Ensembl:ENST00000398146 GeneID:729857 KEGG:hsa:729857 CTD:729857
GeneCards:GC02M088055 HGNC:HGNC:32415 MIM:612705 neXtProt:NX_P0DJD1
ChiTaRS:RGPD2 GenomeRNAi:729857 Bgee:P0DJD1 Uniprot:P0DJD1
Length = 1756
Score = 147 (56.8 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 242 FSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
F ST F K + + + A ++N +S+ + + + E G F P
Sbjct: 1277 FDESTTGFNFSFKSALSLSKSPA----KLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 1332
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 1333 LPDLVEVSSGEENEQVVFSHMAELYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 1391
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 1392 DQVLKLCANHRITPDMSLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSF 1449
Query: 411 Q 411
+
Sbjct: 1450 K 1450
Score = 132 (51.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 37/118 (31%), Positives = 59/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1038 EKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKPRMLMRRD 1095
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A +F+ + EEF+
Sbjct: 1096 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1153
Score = 46 (21.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 20/99 (20%), Positives = 39/99 (39%)
Query: 194 NGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIP 253
+G G+ +P N+++K S + + +N G+ G ++STF F +
Sbjct: 913 DGFKFGISEPGNQEKK--SEKPLENDTGFQAQDISGQKNG-RGVI-FGQTSSTFTFADVA 968
Query: 254 KDGSASNSTSASV---FGQVNNGNSSLFNTPATSIASKS 289
K S F + LF++ +A+K+
Sbjct: 969 KSTSGEGFQFGKKDPNFKGFSGAGEKLFSSQCGKMANKA 1007
Score = 40 (19.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 95 KTVSPAATELLESSENKVSVDANNDAGKEAE----KGDGEDNKQSESKIDEPVAVEAASS 150
K S A +L S K++ AN E + K + D+ E + P VE +
Sbjct: 986 KGFSGAGEKLFSSQCGKMANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTG 1045
Query: 151 EPEKGE 156
E +GE
Sbjct: 1046 E--EGE 1049
>TAIR|locus:2178798 [details] [associations]
symbol:RANBP1 "RAN binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0000060 "protein import into nucleus,
translocation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643 GO:GO:0000060
GO:GO:0051028 EMBL:AB020755 eggNOG:COG5171 HOGENOM:HOG000176323
KO:K15306 EMBL:U62742 IPI:IPI00526983 RefSeq:NP_200667.2
UniGene:At.7865 ProteinModelPortal:P92985 SMR:P92985 STRING:P92985
PaxDb:P92985 PRIDE:P92985 EnsemblPlants:AT5G58590.1 GeneID:835973
KEGG:ath:AT5G58590 GeneFarm:5097 TAIR:At5g58590 InParanoid:P92985
OMA:SCLWHAT PhylomeDB:P92985 ProtClustDB:CLSN2918414
Genevestigator:P92985 GermOnline:AT5G58590 Uniprot:P92985
Length = 219
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRAR 354
++EV V TGEE+E V S ++ F +G+ WKERG G +K+ + TG+ RL+MR
Sbjct: 33 LEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKL-LKHKETGKVRLVMRQS 91
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSG-LSTFALKFRDASI 406
++ N + M + + G +C+ AT+ G L R ASI
Sbjct: 92 KTLKICANHLISSGMSV--QEHSGNEKSCLWHATDFSDGELKDELFCIRFASI 142
>UNIPROTKB|F1MZD9 [details] [associations]
symbol:NUP50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR000156
InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196
SMART:SM00160 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643
GO:GO:0046907 OMA:ECKGGDE GeneTree:ENSGT00440000035348
EMBL:DAAA02014927 IPI:IPI00716408 UniGene:Bt.37218
Ensembl:ENSBTAT00000023480 Uniprot:F1MZD9
Length = 465
Score = 109 (43.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 43/167 (25%), Positives = 76/167 (45%)
Query: 248 AFGSIPKDGSASNSTSASVFGQVNNGN---SSLFNTP-----ATSIASKSEGTTFPSMQE 299
+ S P G + +S ++S+FG+ + SS F+T A S +++ +G E
Sbjct: 281 SLNSGPLTGFSFSSGNSSLFGKDTTQSKPVSSPFSTKTLESQAESGSNECKGGDEEENDE 340
Query: 300 V--VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 357
VV T + + +S LF + +KE+G G L + + N + +LL+RA N
Sbjct: 341 PPKVVVTEVKEDDAFYSKKCKLFYKKENEFKEKGVGTLHLKPTANQ--KTQLLVRADTNL 398
Query: 358 -RLILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLSTFALKFR 402
++LN + P M T M K + C+ N + K+ + + R
Sbjct: 399 GNILLNILIVPSMPCTRMGKNNVLIVCVPNPPVDEKNAATPVTMLIR 445
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EVL R I K RRN + F G +
Sbjct: 25 GTFSVASEEVLKNRAIKKAKRRNVGFESDGGGAFKGFK 62
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGED------NKQSESKIDEPVAVEAASSEPEKGEDES 159
ES NK+SV+A + + K E NK ++ + AV S +P G +
Sbjct: 207 ESEANKISVEAQPPSLFGSTKLQPESPFLFHVNKMEDTSEKKVEAVSEKSKDPSLGATSA 266
Query: 160 S 160
S
Sbjct: 267 S 267
>RGD|3191 [details] [associations]
symbol:Npap60 "nuclear pore associated protein" species:10116
"Rattus norvegicus" [GO:0005643 "nuclear pore" evidence=IEA;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 EMBL:U41845 RGD:3191 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0046907 GO:GO:0051028 GO:GO:0001841 eggNOG:NOG255247
HOVERGEN:HBG052697 KO:K14295 OrthoDB:EOG4VX25D EMBL:BC097337
IPI:IPI00193827 RefSeq:NP_037123.1 UniGene:Rn.123156 UniGene:Rn.3242
ProteinModelPortal:O08587 SMR:O08587 STRING:O08587 PRIDE:O08587
GeneID:25497 KEGG:rno:25497 CTD:25497 HOGENOM:HOG000007919
InParanoid:Q4QR93 NextBio:606893 Genevestigator:O08587
GermOnline:ENSRNOG00000013423 Uniprot:O08587
Length = 467
Score = 115 (45.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 186 GAEKSEVDNGKTAGVDKPENEDEK-E-TSHETTDXXXXXXXXXXXXTQNAFTGLAG---- 239
G+ K + D+ + +K E+ EK E T+ + +D + + + G
Sbjct: 227 GSTKLQQDSPFSFHGNKAEDTSEKLEFTAEKKSDAAQGATSASFNFGKKIESSVLGSLSS 286
Query: 240 ---TGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPS 296
TGFS S KD + S + S+ + + + ++ + E P
Sbjct: 287 GSLTGFSFSPGNSSLFGKDAAQSKAASSPFSAKASESQAGGSSSECRD-GEEEESDEPPK 345
Query: 297 MQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGN 356
+ VV E EE+ +S LF D +KE+G G L ++ AT + +LL+RA N
Sbjct: 346 V--VVTEVKEED--AFYSKKCKLFYKKDNEFKEKGVGTL--HLKPTATQKTQLLVRADTN 399
Query: 357 Y-RLILNASLYPDMKLTNMDKKGITFACI 384
++LN + P+M T K + C+
Sbjct: 400 LGNILLNVLIPPNMPCTRTGKNNVLIVCV 428
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EV+ R + K RRN + S F G +
Sbjct: 25 GTFSVASEEVMKNRAVKKAKRRNIGFESDSGGAFKGFK 62
>UNIPROTKB|G3V7R1 [details] [associations]
symbol:Npap60 "Protein Npap60" species:10116 "Rattus
norvegicus" [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0046907 "intracellular
transport" evidence=IEA] InterPro:IPR000156 InterPro:IPR015007
Pfam:PF00638 Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 RGD:3191
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005643 GO:GO:0046907
EMBL:CH473950 OMA:ECKGGDE GeneTree:ENSGT00440000035348
Ensembl:ENSRNOT00000018155 Ensembl:ENSRNOT00000055922
Uniprot:G3V7R1
Length = 467
Score = 115 (45.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 186 GAEKSEVDNGKTAGVDKPENEDEK-E-TSHETTDXXXXXXXXXXXXTQNAFTGLAG---- 239
G+ K + D+ + +K E+ EK E T+ + +D + + + G
Sbjct: 227 GSTKLQQDSPFSFHGNKAEDTSEKLEFTAEKKSDAAQGATSASFNFGKKIESSVLGSLSS 286
Query: 240 ---TGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPS 296
TGFS S KD + S + S+ + + + ++ + E P
Sbjct: 287 GSLTGFSFSPGNSSLFGKDAAQSKAASSPFSAKASESQAGGSSSECRD-GEEEESDEPPK 345
Query: 297 MQEVVVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGN 356
+ VV E EE+ +S LF D +KE+G G L ++ AT + +LL+RA N
Sbjct: 346 V--VVTEVKEED--AFYSKKCKLFYKKDNEFKEKGVGTL--HLKPTATQKTQLLVRADTN 399
Query: 357 Y-RLILNASLYPDMKLTNMDKKGITFACI 384
++LN + P+M T K + C+
Sbjct: 400 LGNILLNVLIPPNMPCTRTGKNNVLIVCV 428
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EV+ R + K RRN + S F G +
Sbjct: 25 GTFSVASEEVMKNRAVKKAKRRNIGFESDSGGAFKGFK 62
>GENEDB_PFALCIPARUM|PFD0207c [details] [associations]
symbol:PFD0207c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000156 SMART:SM00160
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351355.1
ProteinModelPortal:Q8I1Y6 PRIDE:Q8I1Y6
EnsemblProtists:PFD0207c:mRNA GeneID:812454 KEGG:pfa:PFD0207c
EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP ProtClustDB:CLSZ2433358
Uniprot:Q8I1Y6
Length = 639
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 59/313 (18%), Positives = 124/313 (39%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTES 165
E +++ V D + + + E D E+N E D+ + ++ + D++ + ++
Sbjct: 317 EENDDDVENDDDEENDDDEENDDDEENDDDEENDDDEENDDNEENDDNEENDDNEENDDN 376
Query: 166 KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXX 225
+N+ +KS + K ENE+E+E E +
Sbjct: 377 ENDDDEENDDNDDVNEINSEKNKKSARKSLHLKETPKDENEEEEENLDEGENVDKEKSVE 436
Query: 226 XXXX-TQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNN-GNSSLFNTPAT 283
+ N + + F S+ D ++ N + ++N GN ++
Sbjct: 437 NKSEKSDNESIASDASDIKKNDRLFASM-NDYNSPNKLFSEQMSKLNIFGNINIDIEKLR 495
Query: 284 SIASKSEGTTFPSMQEVVVETGE--ENEKVVFSADSV-LFEFLDGSWKERGKGEL--KVN 338
+K++G + + ET ENE++++S S+ + +F+ + K G L K+
Sbjct: 496 KSLNKNKGNIDEKKEVKMTETENAFENEEILYSESSIKISKFIKKNEKYDWSGYLPVKIQ 555
Query: 339 VSTNATGRA-RLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTF 397
+ N + R+L +G+ RL LN ++ K+ F+ + E K L+ +
Sbjct: 556 IMKNTENKKFRILCFQKGSGRLFLNTDIFDGFKIIPSKNLSALFSGRDICDEKK--LNQY 613
Query: 398 ALKFRDASIVEEF 410
+ F +S +EF
Sbjct: 614 IVTFISSSSRDEF 626
>UNIPROTKB|Q8I1Y6 [details] [associations]
symbol:PFD0207c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000156 SMART:SM00160 GO:GO:0046907
EMBL:AL844503 RefSeq:XP_001351355.1 ProteinModelPortal:Q8I1Y6
PRIDE:Q8I1Y6 EnsemblProtists:PFD0207c:mRNA GeneID:812454
KEGG:pfa:PFD0207c EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP
ProtClustDB:CLSZ2433358 Uniprot:Q8I1Y6
Length = 639
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 59/313 (18%), Positives = 124/313 (39%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTES 165
E +++ V D + + + E D E+N E D+ + ++ + D++ + ++
Sbjct: 317 EENDDDVENDDDEENDDDEENDDDEENDDDEENDDDEENDDNEENDDNEENDDNEENDDN 376
Query: 166 KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXX 225
+N+ +KS + K ENE+E+E E +
Sbjct: 377 ENDDDEENDDNDDVNEINSEKNKKSARKSLHLKETPKDENEEEEENLDEGENVDKEKSVE 436
Query: 226 XXXX-TQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNN-GNSSLFNTPAT 283
+ N + + F S+ D ++ N + ++N GN ++
Sbjct: 437 NKSEKSDNESIASDASDIKKNDRLFASM-NDYNSPNKLFSEQMSKLNIFGNINIDIEKLR 495
Query: 284 SIASKSEGTTFPSMQEVVVETGE--ENEKVVFSADSV-LFEFLDGSWKERGKGEL--KVN 338
+K++G + + ET ENE++++S S+ + +F+ + K G L K+
Sbjct: 496 KSLNKNKGNIDEKKEVKMTETENAFENEEILYSESSIKISKFIKKNEKYDWSGYLPVKIQ 555
Query: 339 VSTNATGRA-RLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTF 397
+ N + R+L +G+ RL LN ++ K+ F+ + E K L+ +
Sbjct: 556 IMKNTENKKFRILCFQKGSGRLFLNTDIFDGFKIIPSKNLSALFSGRDICDEKK--LNQY 613
Query: 398 ALKFRDASIVEEF 410
+ F +S +EF
Sbjct: 614 IVTFISSSSRDEF 626
>UNIPROTKB|F1PA81 [details] [associations]
symbol:F1PA81 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000156 InterPro:IPR001440
InterPro:IPR001876 InterPro:IPR002130 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00160 Pfam:PF00515
Pfam:PF00638 Pfam:PF00641 PRINTS:PR00153 PROSITE:PS01358
PROSITE:PS50005 PROSITE:PS50072 PROSITE:PS50196 PROSITE:PS50199
PROSITE:PS50293 SMART:SM00160 SMART:SM00547 GO:GO:0006457
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008270 GO:GO:0005622
Gene3D:1.25.40.10 GO:GO:0046907 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00690000102083 InterPro:IPR022011
Pfam:PF12185 OMA:SATKCIA EMBL:AAEX03007399 EMBL:AAEX03007398
Ensembl:ENSCAFT00000003160 Uniprot:F1PA81
Length = 3047
Score = 149 (57.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 58/241 (24%), Positives = 105/241 (43%)
Query: 187 AEKSEVDNGKTAG-VDKPENEDEKETSH-ETTDXXXXXXXXXXXXTQNAFTGLAGTGFST 244
+E S+ + + + KP E+ T + D + + LA +
Sbjct: 2087 SESSDAGSANASDTISKPNPENTGPTLEWDNYDLREDALDDSVSSSSVHASPLASSPVRK 2146
Query: 245 STFAFGSIPKDGSASNSTSASVF---GQVNNGNSSLFNTPATSIASKSE--GTTF----P 295
+ F FG + S ++ S ++N +S+ + + + E G F P
Sbjct: 2147 NLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVP 2206
Query: 296 SMQEVVVETGEENEKVVFSADSVLFEF-LD-GSWKERGKGELKVNVSTNATGRARLLMRA 353
V V +GEENE+VVFS + L+ + D G WKERG G++K+ + + R++MR
Sbjct: 2207 LPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKI-LQNYDNKQVRIVMRR 2265
Query: 354 RGNYRLILNASLYPDMKLTNM---DKKGITFACINSATEGKSGLSTFALKFRDASIVEEF 410
+L N + PDM L NM ++ + AC +G+ + A++F+ + + F
Sbjct: 2266 DQVLKLCANHRITPDMTLQNMKGTERVWVWTAC--DFADGERKVEHLAVRFKLQDVADSF 2323
Query: 411 Q 411
+
Sbjct: 2324 K 2324
Score = 143 (55.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 200 VDKPEN-EDEKETSHETTDXXXXXXXXXX--XXTQNAFTGLAGTGFSTSTFAFGSIPKDG 256
VDKP + KE ++T T +F LA + ++ FAFGS K+
Sbjct: 2702 VDKPVDLSTRKENDGDSTSQVESKTVSFGFGSSTGLSFADLASS--NSGDFAFGSKDKNF 2759
Query: 257 SASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTF-P--SMQEVVVETGEENEKVVF 313
+N T A+VFG ++ + +E F P S+ EV V++GEE+E+++F
Sbjct: 2760 QWAN-TGAAVFGTQSSSKVGEDEDDSDEEVVHNEDIHFEPIVSLPEVEVKSGEEDEEILF 2818
Query: 314 SADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRARGNYRLILNASLYPDMKL 371
+ L+ + D S WKERG G++K+ T R+LMR +++ N + M+L
Sbjct: 2819 KERAKLYRWDRDVSQWKERGVGDIKILWHT-LKNYYRILMRRDQVFKVCANHVITKTMEL 2877
Query: 372 T--NMDKKGITFACINSATEGKSGLSTFAL 399
N+ + + + A + G T L
Sbjct: 2878 KPLNVSNNALVWTASDYADDEPLGRITMEL 2907
Score = 138 (53.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 298 QEVVVETGEENEKVVFSADSVLFEFLDGS---WKERGKGELKVNVSTNATGRARLLMRAR 354
++V + TGEE+EKV++S LF F D WKERG G LK+ + G+ R+LMR
Sbjct: 1912 EKVELVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKI-LKNEVNGKLRMLMRRE 1969
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA-TEGKSGLSTFALKFRDASIVEEFQ 411
++ N + M L + + + S ++G + L A KF+ + EEF+
Sbjct: 1970 QVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 2027
Score = 129 (50.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 295 PSMQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMR 352
P ++ V+TGEE+E+ F + LF F ++ WKERG G +K+ + +G+ RLLMR
Sbjct: 1120 PLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKI-LRHKTSGKIRLLMR 1178
Query: 353 ARGNYRLILNASLYPDMKLT 372
++ N + PDMKLT
Sbjct: 1179 REQVLKICANHYISPDMKLT 1198
Score = 47 (21.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 261 STSASVFGQVNNGNSSLFNTPATSIAS 287
S+SA +F Q G F +PAT I S
Sbjct: 928 SSSACMFSQEMYGPPLRFESPATGILS 954
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 105 LESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQT 163
L+++ ++VS + + + E +GE++K S+SK V + P+ E+ S+ T
Sbjct: 2445 LKNNSSEVSSVVKSGSERRVEP-NGEESKNSDSKQSSDGKVRNLFAFPK--EESSTNYT 2500
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDN 132
+ E K ND G +A+ G+ N
Sbjct: 1798 NQEKKSEKPLENDTGVQAQDISGQKN 1823
>RGD|1307559 [details] [associations]
symbol:Ranbp3l "RAN binding protein 3-like" species:10116
"Rattus norvegicus" [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 RGD:1307559 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0046907 IPI:IPI00372039
ProteinModelPortal:D4A9K7 Ensembl:ENSRNOT00000032327 Uniprot:D4A9K7
Length = 465
Score = 130 (50.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 36/111 (32%), Positives = 60/111 (54%)
Query: 274 NSSLFNTPATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEFLDG--SWKERG 331
N SL + A + +SK ++++ V TGEE E V + +F F SW ERG
Sbjct: 263 NISLIES-AAAFSSKPSQKCL--LEKIDVITGEETEHNVLKINCKIFVFNKATQSWSERG 319
Query: 332 KGELKVNVSTNA---TGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGI 379
+G L++N + + T ++RL+MR +G+ RL+LN+ L+ M+ K +
Sbjct: 320 QGVLRLNDTAGSECGTLQSRLIMRNQGSLRLVLNSRLWAQMRTQRASHKSL 370
Score = 37 (18.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 125 EKGDGEDNKQSESKIDEPVAVE 146
EKG+ + +E +DE +E
Sbjct: 43 EKGEHNFKRPAEDSLDEAAELE 64
>TAIR|locus:2060837 [details] [associations]
symbol:AT2G30060 "AT2G30060" species:3702 "Arabidopsis
thaliana" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008536 "Ran
GTPase binding" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015031 GO:GO:0005643
EMBL:AC004680 GO:GO:0046907 GO:GO:0051028 EMBL:AC004165
eggNOG:COG5171 HOGENOM:HOG000176323 KO:K15306
ProtClustDB:CLSN2682543 EMBL:X97378 EMBL:AY093099 EMBL:BT020304
EMBL:BT020473 EMBL:BT024607 IPI:IPI00538593 PIR:T00592
RefSeq:NP_180567.1 UniGene:At.20964 UniGene:At.67860
ProteinModelPortal:Q8RWG8 SMR:Q8RWG8 IntAct:Q8RWG8 STRING:Q8RWG8
PaxDb:Q8RWG8 PRIDE:Q8RWG8 EnsemblPlants:AT2G30060.1 GeneID:817557
KEGG:ath:AT2G30060 GeneFarm:5096 TAIR:At2g30060 InParanoid:Q8RWG8
OMA:ETGANED PhylomeDB:Q8RWG8 Genevestigator:Q8RWG8
GermOnline:AT2G30060 Uniprot:Q8RWG8
Length = 217
Score = 119 (46.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRAR 354
++EV V TGEE+E + S L+ F DGS WKERG G +K + +G+ RL+MR
Sbjct: 36 LEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKF-LKHRVSGKIRLVMRQS 94
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSA---TEGKSGLSTFALKFRDASIVEEF 410
++ N + M + + G +C+ A ++G+ F ++F + F
Sbjct: 95 KTLKICANHLVGSGMSV--QEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENCKAF 151
>SGD|S000001800 [details] [associations]
symbol:SRP40 "Nucleolar serine-rich protein" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] SGD:S000001800
Pfam:PF05022 GO:GO:0005730 GO:GO:0006913 EMBL:BK006944 EMBL:X73541
GeneTree:ENSGT00700000104548 eggNOG:NOG318801 InterPro:IPR007718
RefSeq:NP_013018.3 GeneID:853967 KEGG:sce:YKR092C KO:K02927
RefSeq:NP_013020.3 GeneID:853969 KEGG:sce:YKR094C EMBL:L11275
EMBL:Z28317 PIR:S38170 ProteinModelPortal:P32583 DIP:DIP-2115N
IntAct:P32583 MINT:MINT-472548 STRING:P32583 PaxDb:P32583
EnsemblFungi:YKR092C CYGD:YKR092c OMA:DAXESAR OrthoDB:EOG4M68TB
NextBio:975404 Genevestigator:P32583 GermOnline:YKR092C
Uniprot:P32583
Length = 406
Score = 123 (48.4 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 41/190 (21%), Positives = 79/190 (41%)
Query: 107 SSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESK 166
S E+ ++ ++ K A + D ED K+++ EP + ++SSE SS ++ES
Sbjct: 113 SDESSSESESEDETKKRARESDNEDAKETKKAKTEPES--SSSSESSSSGSSSSSESESG 170
Query: 167 NEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXX 226
+E E+ +E + ++ D + D +S ++D
Sbjct: 171 SESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSS-SSDSSSDSDSSSSSSS 229
Query: 227 XXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVF---GQVNNGNSSLFNTP-A 282
++ + + S+ + + S D S+ STS+ ++G+SS T A
Sbjct: 230 SSSDSDSDSDSSSDSDSSGS-SDSSSSSDSSSDESTSSDSSDSDSDSDSGSSSELETKEA 288
Query: 283 TSIASKSEGT 292
T+ SK+E T
Sbjct: 289 TADESKAEET 298
>DICTYBASE|DDB_G0287391 [details] [associations]
symbol:ranbp1 "Ran binding protein 1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0046907
"intracellular transport" evidence=IEA] [GO:0031291 "Ran protein
signal transduction" evidence=ISS] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000156 InterPro:IPR000697 Pfam:PF00638 PROSITE:PS50196
PROSITE:PS50229 SMART:SM00160 dictyBase:DDB_G0287391 GO:GO:0045335
Gene3D:2.30.29.30 InterPro:IPR011993 GenomeReviews:CM000154_GR
EMBL:AAFI02000100 GO:GO:0046907 GO:GO:0008536 eggNOG:COG5171
HSSP:P49792 RefSeq:XP_637284.1 ProteinModelPortal:Q54KD9
STRING:Q54KD9 PRIDE:Q54KD9 EnsemblProtists:DDB0237919
GeneID:8626115 KEGG:ddi:DDB_G0287391 OMA:ASECEDD
ProtClustDB:CLSZ2728873 GO:GO:0031291 Uniprot:Q54KD9
Length = 194
Score = 108 (43.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 300 VVVETGEENEKVVFSADSVLFEF-LDGS--WKERGKGELKVNVSTNATGRARLLMRARGN 356
V V+T EENE +F + L+ F D S WKERG G ++ + + R R++MR
Sbjct: 58 VEVKTNEENEDTLFEIRAKLYRFDTDPSPQWKERGTGNVRF-LEDKDSKRIRVVMRRDKT 116
Query: 357 YRLILNASLYPDMKL---TNMDKKGITFACIN--SATEGKSGLST-FALKF---RDASIV 407
++ LN + P + L T DK + + C S E G+ FA++F +A +
Sbjct: 117 LKVCLNHHISPALSLGEMTGSDKSWV-WKCPKDFSDEEKPEGVEELFAIRFATPENAGLF 175
Query: 408 E-EFQTAVA 415
+ EFQ A
Sbjct: 176 KTEFQKCQA 184
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 188 EKSEVDNGKTAGVDKPENEDEKETS 212
EK E + T V+K E E ++ETS
Sbjct: 5 EKKEEETTTTTTVEKTE-EKKEETS 28
>UNIPROTKB|Q9UKX7 [details] [associations]
symbol:NUP50 "Nuclear pore complex protein Nup50"
species:9606 "Homo sapiens" [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638 Pfam:PF08911
PROSITE:PS50196 SMART:SM00160 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0005654 GO:GO:0016032 GO:GO:0044281
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015031 GO:GO:0005975
GO:GO:0031965 EMBL:CH471138 GO:GO:0005643 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 GO:GO:0046907
GO:GO:0051028 EMBL:AL008718 PDB:3TJ3 PDBsum:3TJ3 EMBL:AF107840
EMBL:AF116624 EMBL:CR456533 EMBL:AK314454 EMBL:Z82243 EMBL:BC016055
EMBL:BC028125 EMBL:BC070133 EMBL:AL389949 EMBL:AL389950
IPI:IPI00026940 IPI:IPI00170581 RefSeq:NP_009103.2
RefSeq:NP_705931.1 UniGene:Hs.731619 PDB:2EC1 PDBsum:2EC1
ProteinModelPortal:Q9UKX7 SMR:Q9UKX7 IntAct:Q9UKX7 STRING:Q9UKX7
PhosphoSite:Q9UKX7 DMDM:20455193 PaxDb:Q9UKX7 PRIDE:Q9UKX7
DNASU:10762 Ensembl:ENST00000347635 Ensembl:ENST00000396096
Ensembl:ENST00000407019 Ensembl:ENST00000424634 GeneID:10762
KEGG:hsa:10762 UCSC:uc003bfr.3 CTD:10762 GeneCards:GC22P045559
HGNC:HGNC:8065 HPA:HPA047162 MIM:604646 neXtProt:NX_Q9UKX7
PharmGKB:PA31852 eggNOG:NOG255247 HOVERGEN:HBG052697
InParanoid:Q9UKX7 KO:K14295 OMA:ECKGGDE OrthoDB:EOG4VX25D
PhylomeDB:Q9UKX7 ChiTaRS:NUP50 EvolutionaryTrace:Q9UKX7
GenomeRNAi:10762 NextBio:40867 PMAP-CutDB:Q9UKX7
ArrayExpress:Q9UKX7 Bgee:Q9UKX7 CleanEx:HS_NUP50
Genevestigator:Q9UKX7 GermOnline:ENSG00000093000 Uniprot:Q9UKX7
Length = 468
Score = 105 (42.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 43/167 (25%), Positives = 71/167 (42%)
Query: 248 AFGSIPKDGSASNSTSASVFGQVNNGN---SSLFNT-PATSIASKSEGTTFPSMQEV--- 300
+ S+P G + + ++S+FG+ + SS F T P A G +E
Sbjct: 284 SLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQAEGDSGECKGGDEEENDE 343
Query: 301 ---VVETGEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNY 357
VV T + E +S LF D +KE+G G L + + N + +LL+RA N
Sbjct: 344 PPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQ--KTQLLVRADTNL 401
Query: 358 -RLILNASLYPDMKLTNMDKKGITFACI-NSATEGKSGLSTFALKFR 402
++LN + P+M T K + C+ N + K+ + R
Sbjct: 402 GNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDEKNATMPVTMLIR 448
Score = 60 (26.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 39 GTFKKATDEVLATRRIVKV-RRNQTASTPSSNPFAGIR 75
GTF A++EVL R I K RRN + + F G +
Sbjct: 25 GTFSMASEEVLKNRAIKKAKRRNVGFESDTGGAFKGFK 62
>POMBASE|SPBC1711.05 [details] [associations]
symbol:SPBC1711.05 "nucleocytoplasmic transport
chaperone Srp40 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0006605 "protein targeting"
evidence=NAS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISM] InterPro:IPR006594 PROSITE:PS50896 SMART:SM00667
PomBase:SPBC1711.05 Pfam:PF05022 GO:GO:0006605 GO:GO:0005730
EMBL:CU329671 GO:GO:0006913 InterPro:IPR013720 Pfam:PF08513
eggNOG:NOG318801 InterPro:IPR007718 OrthoDB:EOG4M68TB
RefSeq:NP_595878.1 ProteinModelPortal:Q9P785 STRING:Q9P785
PRIDE:Q9P785 EnsemblFungi:SPBC1711.05.1 GeneID:2539687
KEGG:spo:SPBC1711.05 OMA:RKHFSRI NextBio:20800841 Uniprot:Q9P785
Length = 451
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 39/207 (18%), Positives = 81/207 (39%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTES 165
ES + D+++ + + EDN S S D E+ SS + SS +ES
Sbjct: 154 ESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS----ESESSSEDSDSSSSSSDSES 209
Query: 166 KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXX 225
++ E+ +E ++ + + + +ED ++S ++D
Sbjct: 210 ESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS-DSSSSSSDSESESSSK 268
Query: 226 XXXXTQNAFTGLAGTGFSTSTFAFGSIPKDG-SASNSTSASVFGQVNNGNSSLFNTPATS 284
+ N+ + +S S +D S S+S+ + +GNS+ T +
Sbjct: 269 DSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGE 328
Query: 285 IASKSEGTTFPSMQEVVVETGEENEKV 311
++++S T S +E E++ K+
Sbjct: 329 VSAQSS-TNSTSSEESTSVKDEDSSKI 354
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 56/247 (22%), Positives = 98/247 (39%)
Query: 106 ESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTES 165
E+S + S D ++ + E+E EDN S S D E+ SS + D SS ++S
Sbjct: 101 EASGSGSSSDESDSSSSESESSS-EDNDSSSSSSDS----ESESSSEDS--DSSSSSSDS 153
Query: 166 KNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXX 225
++E E+ E S DN ++ E+E E S ++
Sbjct: 154 ESESSSEGSDSSSSSSSSES--ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 211
Query: 226 XXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTS----ASVFGQVNNGNSSLFNTP 281
+ ++ + + S+S S S S S+S +S + SS ++
Sbjct: 212 SSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSD 271
Query: 282 ATSIASKSEGTTFPSMQEVVVETG-EENEKVVFSADSVLFEFL-DGSWKE--RGKGELKV 337
++S +S SE + + E+ E+++ S+DS DG+ GE+
Sbjct: 272 SSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSA 331
Query: 338 NVSTNAT 344
STN+T
Sbjct: 332 QSSTNST 338
>TAIR|locus:2007467 [details] [associations]
symbol:SIRANBP "AT1G07140" species:3702 "Arabidopsis
thaliana" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008536 "Ran
GTPase binding" evidence=ISS] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196
SMART:SM00160 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0015031 GO:GO:0005643
GO:GO:0046907 GO:GO:0051028 EMBL:AC067971 UniGene:At.23647
eggNOG:COG5171 HOGENOM:HOG000176323 KO:K15306 EMBL:X97377
EMBL:AF057024 EMBL:AF370491 EMBL:AF410294 EMBL:AY097364
EMBL:BT002193 IPI:IPI00528119 PIR:D86206 RefSeq:NP_172194.1
UniGene:At.22610 UniGene:At.74721 ProteinModelPortal:Q9LMK7
SMR:Q9LMK7 IntAct:Q9LMK7 STRING:Q9LMK7 PaxDb:Q9LMK7 PRIDE:Q9LMK7
EnsemblPlants:AT1G07140.1 GeneID:837225 KEGG:ath:AT1G07140
GeneFarm:5095 TAIR:At1g07140 InParanoid:Q9LMK7 OMA:MADPAEH
PhylomeDB:Q9LMK7 ProtClustDB:CLSN2682543 Genevestigator:Q9LMK7
GermOnline:AT1G07140 Uniprot:Q9LMK7
Length = 228
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 38/113 (33%), Positives = 54/113 (47%)
Query: 297 MQEVVVETGEENEKVVFSADSVLFEF-LDGS-WKERGKGELKVNVSTNATGRARLLMRAR 354
++EV V TGEE+E V S L+ F D + WKERG G +K N TG+ RL+MR
Sbjct: 34 LEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKN-TGKIRLVMRQS 92
Query: 355 GNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSG-LSTFALKFRDASI 406
++ N + M + + G +C+ A + G L R ASI
Sbjct: 93 KTLKICANHFVKSGMSV--QEHVGNEKSCVWHARDFADGELKDELFCIRFASI 143
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 119 (46.9 bits), Expect = 0.00039, P = 0.00039
Identities = 49/256 (19%), Positives = 102/256 (39%)
Query: 11 SKKRAAGRELSRDNPGXXXXXXXXXXXXGTFKKATDEVLATRRIVKVRRNQTASTPSSNP 70
+KK A +E S D+ + + +++ + KV + S+ S +
Sbjct: 282 NKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSESS 341
Query: 71 FAGIRLXXXXXXXXXXXXXXXXXXKTVSPAATELLESSENKVSVDANNDAGKEAEKGDGE 130
+ ++ SPA++E E E K+ ++ +E+ E
Sbjct: 342 SESVEDEKMDIEKVEIKKEESSDSESSSPASSESKE--EEKMDIEKEETKKEESSSSSSE 399
Query: 131 -DNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEK 189
+ +Q +SK ++ + E SSE EK ++ESS +ES++E E+ +K
Sbjct: 400 SEEEQKKSKKEDSDSDE--SSEDEKKKEESSSSSESEDEKKKEDSDSESS----EDEKKK 453
Query: 190 SEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAF 249
+ D+ ++ + E+ED+K+ +++ + + + + S+S+ +
Sbjct: 454 EDSDSSSSS---ESEDEDKKKKDSSSSESESEKESDSSSSSSESDSSSSSDSDSSSSSSS 510
Query: 250 GSIPKDGSASNSTSAS 265
S S S S S S
Sbjct: 511 SSSSSSSSESESESDS 526
>DICTYBASE|DDB_G0287399 [details] [associations]
symbol:DDB_G0287399 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0287399
GO:GO:0005576 EMBL:AAFI02000100 eggNOG:NOG12793 RefSeq:XP_637288.1
EnsemblProtists:DDB0187468 GeneID:8626120 KEGG:ddi:DDB_G0287399
OMA:ETINIFH Uniprot:Q54KD5
Length = 486
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 55/229 (24%), Positives = 89/229 (38%)
Query: 98 SPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGED 157
S T SS+++ S N +G + + QSES E +ASS P G
Sbjct: 155 SSGTTSSSGSSQSESSQSGNASSGPSSGTTSSSGSSQSESSQSESSQSGSASSGPSSGTT 214
Query: 158 ESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTD 217
SS ++S + +G+ +S+ + T G ++D S +
Sbjct: 215 SSSGSSQSDSS---SFTTTGSQGSSGSSGSSQSDSSSFTTTGSGSGSSQDSMSGSDSMSG 271
Query: 218 XXXXXXXXXXXXTQNAFTGLAGTGFSTSTFA--FGSIPK-DGSASNSTSASVFGQVNNGN 274
+ +FTG +G STST + + P GS+ S+S+S G ++G
Sbjct: 272 SDSMSGSDSMSGS--SFTG-GNSGGSTSTGSGSYSGNPSLTGSSEYSSSSSGGGSGSHGG 328
Query: 275 SSLFNTPATSIASKSEGTTFPSMQEVVVETGEENEKVVF-SADSVLFEF 322
SS T + G + E +V T N K+ F S S + +F
Sbjct: 329 SSSHPNGWTDV-----GQFLLGLAEGLVSTVASNTKLCFQSVGSSITDF 372
>DICTYBASE|DDB_G0271670 [details] [associations]
symbol:DDB_G0271670 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
dictyBase:DDB_G0271670 GO:GO:0005576 EMBL:AAFI02000006
ProtClustDB:CLSZ2431310 RefSeq:XP_645495.1
ProteinModelPortal:Q75JC9 EnsemblProtists:DDB0168484 GeneID:8618123
KEGG:ddi:DDB_G0271670 OMA:EITNEEP Uniprot:Q75JC9
Length = 374
Score = 115 (45.5 bits), Expect = 0.00064, P = 0.00064
Identities = 32/247 (12%), Positives = 87/247 (35%)
Query: 60 NQTASTPSSNPFAGIRLXXXXXXXXXXXXXXXXXXKTVSPAATELLESSENKVSVDANND 119
+ ++S+ SS+ + + S +++ SS + S +++
Sbjct: 127 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 186
Query: 120 AGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTESKNEPXXXXXXXXXX 179
+ + + S S + ++SS SS + S +
Sbjct: 187 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 246
Query: 180 XXXXENGAEKSEVDNGKTAGVDKPENEDEKETSHETTDXXXXXXXXXXXXTQNAFTGLAG 239
+ + S + ++ + +S ++ + ++ + +
Sbjct: 247 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 306
Query: 240 TGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQE 299
+ S+S+ + S S+S+S+S+S ++ +SS ++ ++S +S S ++ S
Sbjct: 307 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 366
Query: 300 VVVETGE 306
+GE
Sbjct: 367 SSSSSGE 373
>WB|WBGene00004306 [details] [associations]
symbol:ran-5 species:6239 "Caenorhabditis elegans"
[GO:0046907 "intracellular transport" evidence=IEA] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR000156 Pfam:PF00638
PROSITE:PS50196 SMART:SM00160 GO:GO:0009792 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0046907 KO:K15304 eggNOG:NOG304969
GeneTree:ENSGT00530000063644 EMBL:FO081545 PIR:T16733
RefSeq:NP_495208.1 ProteinModelPortal:Q21961 SMR:Q21961
STRING:Q21961 PaxDb:Q21961 EnsemblMetazoa:R12C12.2.1
EnsemblMetazoa:R12C12.2.2 GeneID:174011 KEGG:cel:CELE_R12C12.2
UCSC:R12C12.2.1 CTD:174011 WormBase:R12C12.2 HOGENOM:HOG000016971
InParanoid:Q21961 OMA:SAMGPEI NextBio:882115 Uniprot:Q21961
Length = 340
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 300 VVVETGEENEKVVFSADSVLFEF--LDGSWKERGKGELKVNVST-NATGRARLLMR-ARG 355
V + TGEEN+ +F A ++ F L ++ E+G L++N N R++ R + G
Sbjct: 143 VEITTGEENDTNIFQAPCKIWAFDKLKNAYSEKGVCNLRINKRVENGLTHHRIVARTSSG 202
Query: 356 NYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSGLSTFALK 400
R+I+N+ ++ DM L +DK+ I + + SG+ F LK
Sbjct: 203 TLRVIINSKIFSDMLLERVDKR-IRISAMGPEI---SGVQIFLLK 243
>UNIPROTKB|Q5JSK9 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 SMART:SM00527 GO:GO:0005730 GO:GO:0000785
GO:GO:0031492 EMBL:AL391294 UniGene:Hs.282204 HGNC:HGNC:8013
HOGENOM:HOG000113856 ChiTaRS:HMGN5 EMBL:AL357115 EMBL:AL590810
IPI:IPI00642320 STRING:Q5JSK9 Ensembl:ENST00000447319
Uniprot:Q5JSK9
Length = 201
Score = 109 (43.4 bits), Expect = 0.00070, P = 0.00070
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 96 TVSPAAT-ELLESSENKVSVDANNDAGKEAE------KGDGEDNKQSESKIDEPVAVEAA 148
T +PA+ E++E E + DA G++ E K + ED K+ E +E
Sbjct: 68 TEAPASEKEIVEVKEENIE-DATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGK 126
Query: 149 SSEPEKGEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDE 208
+ EKGE E K+ ++ NE E+G K ++GK G D+ E ED
Sbjct: 127 EDKDEKGE-EDGKEDKNGNEKGEDAKEKEDGKKG-EDG--KGNGEDGKEKGEDEKEEEDR 182
Query: 209 KET 211
KET
Sbjct: 183 KET 185
>CGD|CAL0000295 [details] [associations]
symbol:IFF8 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0009986 "cell surface"
evidence=ISS] [GO:0009277 "fungal-type cell wall" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] CGD:CAL0000295
GO:GO:0009986 eggNOG:NOG12793 GO:GO:0009277 EMBL:AACQ01000109
EMBL:AACQ01000108 InterPro:IPR021031 Pfam:PF11765
RefSeq:XP_714158.1 RefSeq:XP_714201.1 GeneID:3644117 GeneID:3644195
KEGG:cal:CaO19.570 KEGG:cal:CaO19.8201 Uniprot:Q59XB0
Length = 714
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 51/224 (22%), Positives = 81/224 (36%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEK-GDGEDNKQSESKIDEPVAVEAASSEPEK 154
+ S TE E+S + N + E+E G ++ SE+ + + +SE +
Sbjct: 377 SASTTTTESSETSNTSSNASETNGSSTESETTGSATTSEASETINSSESSETSGASETSQ 436
Query: 155 --GEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETS 212
G ESS+ S E +G + S V + A D +E +S
Sbjct: 437 STGTSESSETESSVTESSETDSITATTSDTTSSGNDNSSVTSSSDASTDSITSETASSSS 496
Query: 213 HETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGS-IPKDGSA-----SNST--SA 264
T T + +A +++F FGS P G+ +NST +
Sbjct: 497 ---TPLSGDSSQVSSLTTGTSPDTIASFQTDSTSFGFGSGSPSSGAVQSSGVTNSTPNTG 553
Query: 265 SVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQEVVVETGEEN 308
V Q N N + + ATS AS G + TG +N
Sbjct: 554 DVNTQSNTANIATSDNTATSTASNDTGVNTATATTTGTGTGPDN 597
>UNIPROTKB|Q59XB0 [details] [associations]
symbol:IFF8 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0009277 "fungal-type cell wall" evidence=IDA]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0000295
GO:GO:0009986 eggNOG:NOG12793 GO:GO:0009277 EMBL:AACQ01000109
EMBL:AACQ01000108 InterPro:IPR021031 Pfam:PF11765
RefSeq:XP_714158.1 RefSeq:XP_714201.1 GeneID:3644117 GeneID:3644195
KEGG:cal:CaO19.570 KEGG:cal:CaO19.8201 Uniprot:Q59XB0
Length = 714
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 51/224 (22%), Positives = 81/224 (36%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEK-GDGEDNKQSESKIDEPVAVEAASSEPEK 154
+ S TE E+S + N + E+E G ++ SE+ + + +SE +
Sbjct: 377 SASTTTTESSETSNTSSNASETNGSSTESETTGSATTSEASETINSSESSETSGASETSQ 436
Query: 155 --GEDESSKQTESKNEPXXXXXXXXXXXXXXENGAEKSEVDNGKTAGVDKPENEDEKETS 212
G ESS+ S E +G + S V + A D +E +S
Sbjct: 437 STGTSESSETESSVTESSETDSITATTSDTTSSGNDNSSVTSSSDASTDSITSETASSSS 496
Query: 213 HETTDXXXXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGS-IPKDGSA-----SNST--SA 264
T T + +A +++F FGS P G+ +NST +
Sbjct: 497 ---TPLSGDSSQVSSLTTGTSPDTIASFQTDSTSFGFGSGSPSSGAVQSSGVTNSTPNTG 553
Query: 265 SVFGQVNNGNSSLFNTPATSIASKSEGTTFPSMQEVVVETGEEN 308
V Q N N + + ATS AS G + TG +N
Sbjct: 554 DVNTQSNTANIATSDNTATSTASNDTGVNTATATTTGTGTGPDN 597
>SGD|S000004327 [details] [associations]
symbol:NUP2 "Nucleoporin involved in nucleocytoplasmic
transport" species:4932 "Saccharomyces cerevisiae" [GO:0035392
"maintenance of chromatin silencing at telomere" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006611 "protein
export from nucleus" evidence=IGI;IMP;IPI] [GO:0000061 "protein
import into nucleus, substrate release" evidence=IDA] [GO:0036228
"protein targeting to nuclear inner membrane" evidence=IMP]
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0044615 "nuclear pore nuclear basket" evidence=IDA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IGI;IPI]
[GO:0008536 "Ran GTPase binding" evidence=IPI] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031990 "mRNA export from nucleus in response to heat stress"
evidence=IMP] [GO:0000972 "transcription-dependent tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0000973 "posttranscriptional tethering of RNA polymerase II
gene DNA at nuclear periphery" evidence=IMP] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IGI;IMP]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0016973 "poly(A)+ mRNA export from
nucleus" evidence=IMP] [GO:0046907 "intracellular transport"
evidence=IEA] InterPro:IPR000156 InterPro:IPR015007 Pfam:PF00638
Pfam:PF08911 PROSITE:PS50196 SMART:SM00160 SGD:S000004327
GO:GO:0005739 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0031965
EMBL:BK006945 GO:GO:0030466 GO:GO:0006611 GO:GO:0031990
GO:GO:0006607 TCDB:9.A.14.1.1 GO:GO:0044614 EMBL:U19028
GO:GO:0016973 GO:GO:0000973 GO:GO:0036228 PDB:1UN0 PDB:2C1T
PDBsum:1UN0 PDBsum:2C1T GO:GO:0044615 GeneTree:ENSGT00700000105429
GO:GO:0005487 GO:GO:0035392 EMBL:X69964 PIR:S51340
RefSeq:NP_013439.1 DisProt:DP00222 ProteinModelPortal:P32499
SMR:P32499 DIP:DIP-859N IntAct:P32499 MINT:MINT-395606
STRING:P32499 PaxDb:P32499 PeptideAtlas:P32499 DNASU:851048
EnsemblFungi:YLR335W GeneID:851048 KEGG:sce:YLR335W CYGD:YLR335w
eggNOG:COG5171 HOGENOM:HOG000248337 OMA:DEPKPAF OrthoDB:EOG4ZSDCT
EvolutionaryTrace:P32499 NextBio:967658 Genevestigator:P32499
GermOnline:YLR335W GO:GO:0000061 Uniprot:P32499
Length = 720
Score = 118 (46.6 bits), Expect = 0.00078, P = 0.00078
Identities = 71/318 (22%), Positives = 125/318 (39%)
Query: 105 LESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEKGEDESSKQTE 164
+E +K + + ++AG E EK E K S+ ++ + S + +K S+ E
Sbjct: 407 VEKPSSKPAFNLISNAGTEKEK---ESKKDSKPAFSFGISNGSESKDSDKPSLPSAVDGE 463
Query: 165 S-KNEPXXXXXXXXXXXXXXENGAEKSEVDN-GKTAGVDKPENEDEK---ETSHETTDXX 219
+ K E + K+ G +A D E+ + TS
Sbjct: 464 NDKKEATKPAFSFGINTNTTKTADTKAPTFTFGSSALADNKEDVKKPFSFGTSQPNNTPS 523
Query: 220 XXXXXXXXXXTQNAFTGLAGTGFSTSTFAFGSIPKDGSASNSTSASVFGQVNNGNSSLFN 279
N+ T A + ST F F S+P + S +T+ + + + N
Sbjct: 524 FSFGKTTANLPANSSTSPAPSIPSTG-FKF-SLPFEQKGSQTTTND--SKEESTTEATGN 579
Query: 280 TPATSIASKSEGTTFPSMQEVVVETGEENEKVVFSADSVLFEFL--DGSWKERGKGELKV 337
+ A+K + T S + + ++ GEE+E +FS + L F S+ RG GE+K+
Sbjct: 580 E--SQDATKVDATPEES-KPINLQNGEEDEVALFSQKAKLMTFNAETKSYDSRGVGEMKL 636
Query: 338 NVSTNATGRARLLMRARGNYRLILNASLYPDMKLTNMDKKGITFACINSATEGKSG-LST 396
+ + RLL R+ G ++LNA++ K + I + T G L T
Sbjct: 637 LKKKDDPSKVRLLCRSDGMGNVLLNATVVDSFKYEPLAPGNDNL--IKAPTVAADGKLVT 694
Query: 397 FALKFRDASIVEEFQTAV 414
+ +KF+ F A+
Sbjct: 695 YIVKFKQKEEGRSFTKAI 712
>ZFIN|ZDB-GENE-091204-441 [details] [associations]
symbol:si:zfos-979f1.2 "si:zfos-979f1.2"
species:7955 "Danio rerio" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046907 "intracellular transport" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR000156 InterPro:IPR000315
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 Pfam:PF00638
Pfam:PF00643 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
PROSITE:PS50119 PROSITE:PS50196 SMART:SM00160 SMART:SM00336
ZFIN:ZDB-GENE-091204-441 Gene3D:2.30.29.30 InterPro:IPR011993
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50891
GeneTree:ENSGT00690000102083 EMBL:FP236594 EMBL:FP245477
Ensembl:ENSDART00000135619 Uniprot:K7DY47
Length = 664
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 305 GEENEKVVFSADSVLFEFLDGSWKERGKGELKVNVSTNATGRARLLMRARGNYRLILNAS 364
GEE+E+++F + L+ + D WK+RG G +K+ R +LMR + ++ N S
Sbjct: 377 GEEDEEILFKERTRLYHW-DDQWKDRGFGNIKIFFHP-LKKRYHVLMRHEQSLKVCANHS 434
Query: 365 LYPDMKLT--NMDKKGITFACINSATEGKSGLSTFALKFRDASIVEEFQ 411
+ +LT N +T+ I+ + EG A+KFR A ++ F+
Sbjct: 435 ISRGSQLTPMNTSANSLTWTAIDYS-EGDGKTKQLAVKFRTADQMKSFK 482
Score = 44 (20.5 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 96 TVSPAATELLESSENKVSVDANNDAGKEAEKGDGEDNKQSESKIDEPVAVEAASSEPEK 154
T+S T + + ++ A+ND K+ + DN + E +P+ E E+
Sbjct: 325 TLSNMGTSVFAGAPSQTE-KAHNDGEKKKSDDEAPDNNEVEFDPIDPLTEMHPGEEDEE 382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.304 0.122 0.323 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 360 0.00082 117 3 11 23 0.42 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 92
No. of states in DFA: 583 (62 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.66u 0.13s 36.79t Elapsed: 00:00:02
Total cpu time: 36.69u 0.13s 36.82t Elapsed: 00:00:02
Start: Thu May 9 15:19:26 2013 End: Thu May 9 15:19:28 2013