BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014917
         (416 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q75B79|ATG11_ASHGO Autophagy-related protein 11 OS=Ashbya gossypii (strain ATCC 10895
           / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG11 PE=3
           SV=1
          Length = 1072

 Score = 34.3 bits (77), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 13/135 (9%)

Query: 255 STEALKETLEQIQ-LCSKLEDLFLKKKSLRNGDSPEQHGVKVHKLKIFSESLVNSTSKAE 313
           ST+++ E +E  +   +KLE L L      N  S     +  + L +F     N  S  E
Sbjct: 547 STDSMNEVIEGYKNRINKLE-LLLHSTQFSNTSSWPTGVLNSNSLNVFHN---NIASINE 602

Query: 314 KRILENRSQKEEALHFRLAKCNEVCQLEKDLTVEIQELEKQKDELEIALKKVNTSLVTTR 373
           K +L +   ++  +     K NE     K+L  ++ EL+KQ +E +   K+V   L TT+
Sbjct: 603 KLLLSDYKSRDSIMS---GKSNE-----KELQSQLVELQKQLEEAKNEAKRVQQQLKTTK 654

Query: 374 ARLRNAKEEREQFDE 388
            +L N ++ER  + E
Sbjct: 655 TQLLNGEDERTAYKE 669


>sp|Q9BXL6|CAR14_HUMAN Caspase recruitment domain-containing protein 14 OS=Homo sapiens
           GN=CARD14 PE=1 SV=2
          Length = 1004

 Score = 33.1 bits (74), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 41/227 (18%)

Query: 189 QDEVLVKR----EELLQYAQGAIAGL-KINADLPRIDAEARGLIGKLDKIKPVQWPSDEV 243
           Q EVL++R    +E L  A+    GL ++ AD  R+  E      ++ ++K      DE+
Sbjct: 145 QKEVLLRRCQQLQEHLGLAETRAEGLHQLEADHSRMKREVSAHFHEVLRLK------DEM 198

Query: 244 VDKLSEETTTVSTEALKETLEQIQLCSKL-EDLFLKKKSLRNGDSPEQHGVKVHKLKIFS 302
           +       +   + AL+E       C  L E+L+L K+ L+  +      V   +L++  
Sbjct: 199 LS-----LSLHYSNALQEKELAASRCRSLQEELYLLKQELQRANM-----VSSCELELQE 248

Query: 303 ESLVNSTSKA----EKRILENRSQKEEALHFRLAKCNEVCQLEKDLTVEIQELEKQKDEL 358
           +SL  ++ +     E   L+  ++K  +L F LA        EKD+      LE+  DE 
Sbjct: 249 QSLRTASDQESGDEELNRLKEENEKLRSLTFSLA--------EKDI------LEQSLDEA 294

Query: 359 EIALKKVNTSLVTTRARLRNAKEEREQFDEANNKILVYF-KSKMSCQ 404
             + +++   + + R R   A+ +REQ+ E   + L+ F KSKM+CQ
Sbjct: 295 RGSRQELVERIHSLRERAVAAERQREQYWEEKEQTLLQFQKSKMACQ 341


>sp|P80877|METE_BACSU 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase OS=Bacillus subtilis (strain 168)
           GN=metE PE=1 SV=4
          Length = 762

 Score = 32.0 bits (71), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 28/186 (15%)

Query: 166 GGKEVHSAVMSSIQDLATVFSTYQDEVLVKREELLQYAQGAIAGLKINADLPRIDAEARG 225
           G KE+  ++ S +  L  +  TY D V    EEL+ Y    I GL    D  R       
Sbjct: 218 GAKELFESITSELSSLNVLLQTYFDSVDA-YEELISYPVQGI-GLDFVHDKGR------- 268

Query: 226 LIGKLDKIKPVQWPSDEVVDKLSEETTTVSTEALKETLE---QIQLCSKLEDLFLKKKS- 281
               L+++K   +P+D+V+     +   +    L+E L+    I   +K+++L+++  S 
Sbjct: 269 ---NLEQLKTHGFPTDKVLAAGVIDGRNIWKADLEERLDAVLDILSIAKVDELWIQPSSS 325

Query: 282 ---LRNGDSPEQHGVKVHKLKIFSESLVNSTSKAEKRILENRSQKEEALHFRLAKCNEVC 338
              +     P++H           + L+N  S A++++ E  + KE  +  + A   E+ 
Sbjct: 326 LLHVPVAKHPDEH---------LEKDLLNGLSYAKEKLAELTALKEGLVSGKAAISEEIQ 376

Query: 339 QLEKDL 344
           Q + D+
Sbjct: 377 QAKADI 382


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.131    0.359 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,291,081
Number of Sequences: 539616
Number of extensions: 5917048
Number of successful extensions: 21501
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 548
Number of HSP's that attempted gapping in prelim test: 19958
Number of HSP's gapped (non-prelim): 2026
length of query: 416
length of database: 191,569,459
effective HSP length: 120
effective length of query: 296
effective length of database: 126,815,539
effective search space: 37537399544
effective search space used: 37537399544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)