BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014918
(416 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255576147|ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis]
Length = 456
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 295/448 (65%), Positives = 341/448 (76%), Gaps = 42/448 (9%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
RQVKSNAV+NQS DNIEEAIWRLKIHDNQE GG+A +SPYP RPGEPDC++Y RTGLCGY
Sbjct: 12 RQVKSNAVSNQSPDNIEEAIWRLKIHDNQEQGGMAPSSPYPDRPGEPDCVYYLRTGLCGY 71
Query: 65 GSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
G+NCRFNHP YAAQG Q++EELPER GQPDCGYYLKTGTCKYGSTCKYHHP+DRNGAGPV
Sbjct: 72 GNNCRFNHPPYAAQGNQFKEELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRNGAGPV 131
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSF----------------------------------- 149
SFNI+GLPMRQDEKSCPYYMRTGS
Sbjct: 132 SFNIVGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSN 191
Query: 150 LPSSGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP 208
LPSSGL Y G LPTWSL RAPY+S RLQG Q+YMP ++SPSQG+V A GWNTY+GN+ P
Sbjct: 192 LPSSGLPYVGGLPTWSLPRAPYVSGPRLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLSP 251
Query: 209 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 268
+S S+ GS+++Y+SRNQ + G+ Q+H+LS +S NLPERPDQP+CRY+MNTGTCKYG+D
Sbjct: 252 MSSGSVLGSSIVYNSRNQSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSD 311
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
CK+HHPKERIAQ A ++IGP+GLPSRPGQ ICSNYSMYG+CKFGPTCRFDHP+ GYP Y
Sbjct: 312 CKYHHPKERIAQLATNSIGPVGLPSRPGQPICSNYSMYGLCKFGPTCRFDHPFTGYPYGY 371
Query: 329 GLSLPPLSILDSSLMNHQAIS-ATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNST 387
LSL PLSI+DSSL+++ +S S E+ SSK P+WVQN D S +HQN D
Sbjct: 372 SLSLQPLSIIDSSLLSYPRMSPPALSSESPISLSSKFPDWVQNPDGASSKHQNSDRN--- 428
Query: 388 TKNSDDSSKV--DHPPHSVPNCSEPPHD 413
TK SDD + PPHS SEP HD
Sbjct: 429 TKISDDQPEQAGSPPPHSSQASSEPSHD 456
>gi|224129058|ref|XP_002320490.1| predicted protein [Populus trichocarpa]
gi|222861263|gb|EEE98805.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 290/454 (63%), Positives = 337/454 (74%), Gaps = 49/454 (10%)
Query: 1 MPD--NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRR 58
MPD NRQVKSNAV+NQSA+NIEEAIWRLKIHD+QE GG+AQ+SPYP RPG PDC +Y R
Sbjct: 1 MPDHNNRQVKSNAVSNQSAENIEEAIWRLKIHDHQEQGGMAQSSPYPDRPGAPDCGYYLR 60
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
TGLCGYGSNCRFNHP YAA GAQ REELPER GQPDCGYYLKTGTCKYGSTCKYHHP+DR
Sbjct: 61 TGLCGYGSNCRFNHPVYAALGAQLREELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDR 120
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGS------------------------------ 148
NGAGPVSFN LGLPMRQDEKSCPYYMRT S
Sbjct: 121 NGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSFSLTGAAAFG 180
Query: 149 -----FLPSSGLQYAGSLPTWSLQRAPYLS-SRLQGTQSYMPLIVSPSQGIVPAPGWNTY 202
+PSSGL Y G LPTWSL RAP +S + LQG Q+YMP++VSPS GI+P PGWNTY
Sbjct: 181 STGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQGPQAYMPVVVSPSPGIIPVPGWNTY 240
Query: 203 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 262
+GN+ P+S +SI GSN Y SRNQGD G+G Q+H+LS S LPERP QP+CR++M+TGT
Sbjct: 241 VGNLNPMSSSSILGSNRAYDSRNQGDSGSGGQVHLLSTVSPILPERPGQPECRHFMSTGT 300
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CKYG+DCK+HHPKERIAQ A + +G LGLPSRPGQA+C +YSMYGICKFGPTCR+DHP
Sbjct: 301 CKYGSDCKYHHPKERIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFGPTCRYDHPIH 360
Query: 323 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV-QHQNP 381
YP NY LSLP LSI+DSSL+ + ++ + +P SK+P+ + N D S +HQNP
Sbjct: 361 TYPYNYSLSLPSLSIMDSSLITYPRMA-----QAAPVTLSKLPDLIHNPDGASYNKHQNP 415
Query: 382 DMKNSTTKNSDDSSKV--DHPPHSVPNCSEPPHD 413
D ++TK SDD ++ PPHS SEP HD
Sbjct: 416 D---TSTKISDDPTEQAGSPPPHSSQASSEPSHD 446
>gi|225447159|ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera]
gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera]
Length = 450
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 284/454 (62%), Positives = 339/454 (74%), Gaps = 42/454 (9%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M DNRQV+SN V+N S++N+EEAI RLKIHDNQE G V +SPYP RPGEPDC++Y RTG
Sbjct: 1 MLDNRQVQSNGVSNPSSENVEEAILRLKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
LCGYGSNCRFNHPAY+ QGAQYR ELPER GQPDCGY+LKTGTCKYGSTCKYHHP+DR+G
Sbjct: 61 LCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG 120
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTG--------------------------------- 147
AGPVS NI+GLPMRQ+EK C YYMRTG
Sbjct: 121 AGPVSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGST 180
Query: 148 --SFLPSSGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMG 204
S LPSSGL Y G LP WSL RAPY+ R+QG Q+YMP+++SPSQGIVPA GWNTYMG
Sbjct: 181 GSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMG 240
Query: 205 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 264
N+ P+S T I GSNL+Y+SRNQ + G+ Q+H+LS+ +LPERPDQP+CRY+M+TG+CK
Sbjct: 241 NMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCK 300
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 324
YG+DCK+HHPKERIAQ A + +GPLGLP RPGQA+CS+Y++YG+CK+GPTC+FDHP GY
Sbjct: 301 YGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGY 360
Query: 325 -PINYGLSLPPLSILDSSLMNHQAISAT-HSIETSPDASSKIPNWVQNSDAVSVQHQNPD 382
NY LSLPPLSILD SL+ +Q S+T HS ETSP SSK P+WVQ +++ S + QNPD
Sbjct: 361 SSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPD 420
Query: 383 MKNSTTKNSDDSSKVDHPPHSVPNCSEPPHDQSN 416
K S + HS PN SEPP DQS+
Sbjct: 421 TKAPEGPPEQAGSLL----HSSPNSSEPPQDQSD 450
>gi|224068913|ref|XP_002302855.1| predicted protein [Populus trichocarpa]
gi|222844581|gb|EEE82128.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/455 (62%), Positives = 330/455 (72%), Gaps = 47/455 (10%)
Query: 1 MPD--NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRR 58
MPD NRQVKSNAV+N SADNIEEA WRLKIHD QE GG+AQ+SPYP RPG PDC +Y R
Sbjct: 1 MPDQNNRQVKSNAVSNHSADNIEEAFWRLKIHDPQEQGGMAQSSPYPDRPGVPDCGYYLR 60
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
TGLCGYGSNCR+NHP YAAQG Q REELPER GQPDCGYY+KTGTCKYGSTCKYHHP+DR
Sbjct: 61 TGLCGYGSNCRYNHPIYAAQGTQLREELPERIGQPDCGYYIKTGTCKYGSTCKYHHPRDR 120
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGS------------------------------ 148
NGAGPVSFN LGLPMRQDEKSCPYYMRT S
Sbjct: 121 NGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGAAAFG 180
Query: 149 -----FLPSSGLQYAGSLPTWSLQRA-PYLS-SRLQGTQSYMPLIVSPSQGIVPAPGWNT 201
+PSSGL Y G LPTWSL RA PY+S + LQG Q+YMP++VSPSQGIVP PGWNT
Sbjct: 181 STGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQGPQAYMPVVVSPSQGIVPVPGWNT 240
Query: 202 YMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG 261
Y+GN P+S +SI GSN Y SRN GD +G+ H+LS + LPERPDQP+CR++M++G
Sbjct: 241 YVGNSNPMSSSSILGSNRAYDSRNHGD--SGSSGHLLSTAIPALPERPDQPECRHFMSSG 298
Query: 262 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
TCKYG+DCK+HHPKERIAQ A + +GP GLP RPGQA+C +YSMYGICKFGPTCR+DHP
Sbjct: 299 TCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGPTCRYDHPL 358
Query: 322 AGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV-QHQN 380
YP NY LSLP LS++DSSL+ + ++ +P + SK+P+ ++N D S +HQN
Sbjct: 359 PTYPYNYSLSLPSLSMMDSSLVTYPRMAQAALSSATPVSLSKLPDLIRNPDGASYNKHQN 418
Query: 381 PDMKNSTTKNSDDSSK--VDHPPHSVPNCSEPPHD 413
D S TK DD ++ PPHS SEP HD
Sbjct: 419 SD---SNTKTLDDPTEHAGSPPPHSSQASSEPSHD 450
>gi|147819907|emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/453 (57%), Positives = 310/453 (68%), Gaps = 73/453 (16%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ 92
+E G V +SPYP RPGEPDC++Y RTGLCGYGSNCRFNHPAY+ QGAQYR ELPER GQ
Sbjct: 12 KEEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQ 71
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG----- 147
PDCGY+LKTGTCKYGSTCKYHHP+DR+GAGPV NI+GLPMRQ+EK C YYMRTG
Sbjct: 72 PDCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVXLNIVGLPMRQEEKPCSYYMRTGLCKFG 131
Query: 148 ------------------------------SFLPSSGLQYAGSLPTWSLQRAPYLSS-RL 176
S LPSSGL Y G LP WSL RAPY+ R+
Sbjct: 132 AACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRM 191
Query: 177 QGTQSYMPLIVSPSQGIVPAPGWNTYM-------------------------------GN 205
QG Q+YMP+++SPSQGIVPA GWNTYM GN
Sbjct: 192 QGPQTYMPIVLSPSQGIVPAQGWNTYMPHFLVLMKSFHVVNLVYSIDPNEFVICEIPRGN 251
Query: 206 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 265
+ P+S T I GSNL+Y+SRNQ + G+ Q+H+LS+ +LPERPDQP+CRY+M+TG+CKY
Sbjct: 252 MSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKY 311
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY- 324
G+DCK+HHPKERIAQ A + +GPLGLP RPGQA+CS+Y++YG+CK+GPTC+FDHP GY
Sbjct: 312 GSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGYS 371
Query: 325 PINYGLSLPPLSILDSSLMNHQAISAT-HSIETSPDASSKIPNWVQNSDAVSVQHQNPDM 383
NY LSLPPLSILD SL+ +Q S+T HS ETSP SSK P+WVQ +++ S + QNPD
Sbjct: 372 SYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPDT 431
Query: 384 KNSTTKNSDDSSKVDHPPHSVPNCSEPPHDQSN 416
K S + HS PN SEPP DQS+
Sbjct: 432 KAPEGPPEQAGSLL----HSSPNSSEPPQDQSD 460
>gi|449450892|ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus]
gi|449515163|ref|XP_004164619.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus]
Length = 430
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/451 (53%), Positives = 297/451 (65%), Gaps = 58/451 (12%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MPDN QV+ N V NQS D I EA+WRL+I DNQ+GG A++SPYP RPGEPDCL+Y RTG
Sbjct: 1 MPDNLQVQRNDVPNQSPD-ISEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTG 59
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
C YGSNCRFNHP Y QGA Y ELPER GQPDC Y+LKTGTCKYG +CKYHHP+DR G
Sbjct: 60 SCSYGSNCRFNHPVYVGQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDRRG 119
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGS-------------------------------- 148
AGPV+FNILGLPMRQ+EKSCPYY+RTGS
Sbjct: 120 AGPVTFNILGLPMRQEEKSCPYYLRTGSCKFGVSCKFNHPQPSPVGNMLPQARPGALGSG 179
Query: 149 ---FLPSSGLQYAGSLPTWSLQRAPYLSSR-LQGTQSYMPLIVSPSQGIVPAPGWNTYMG 204
F+PSSG+ Y P WS+ R Y+ +QG QSY+P++VSPSQG + A WNTY+
Sbjct: 180 GTPFMPSSGVPY----PAWSMPRVQYMPGPCVQGQQSYVPVLVSPSQGAIAAQDWNTYVS 235
Query: 205 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 264
N+ P+ P NL Y++ N D + Q+ LS S+ LP+RPDQP+CRY+MN GTCK
Sbjct: 236 NVNPILP------NLGYNNINLEDSYSNGQL-ALSTSTPTLPDRPDQPECRYFMNNGTCK 288
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 324
YG+DCKFHHPK+RIAQSA + LGLPSRPGQAICS Y+MYG+CK+GP+C+FDHP Y
Sbjct: 289 YGSDCKFHHPKQRIAQSATNA---LGLPSRPGQAICSYYNMYGLCKYGPSCKFDHPSPTY 345
Query: 325 PINYGLSLPPLSILDSSLMNHQAISATHSI-ETSPDASSKIPNWVQNSDAVSVQHQNPDM 383
P NYG +LP +LDSS++ + + + T S ET P SK WVQ +D + + + D
Sbjct: 346 PYNYGFTLP---LLDSSIIKYPSNNFTMSSHETLPGTVSKSSEWVQKADPSNNKRRTTDS 402
Query: 384 KNSTTKNSDDSSKVDHPPHSVPNCSEPPHDQ 414
K ++++ V S+P SE DQ
Sbjct: 403 KVIIDSTGEEATSVS---CSLPGGSESLQDQ 430
>gi|357493165|ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355518206|gb|AES99829.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 422
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/406 (55%), Positives = 270/406 (66%), Gaps = 44/406 (10%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MP+NRQV NA +N S DNIEEAI RLKI+ ++ V Q+ PYP RPGEPDC++Y RTG
Sbjct: 1 MPENRQVFKNAGSNPSGDNIEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+CGYGSNCR+NHPA + QY EELPER GQPDC Y+LKTGTCKYGSTCKYHHPKDR G
Sbjct: 61 MCGYGSNCRYNHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRG 120
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGS-------------------------------F 149
A PV FN LGLPMRQ+EKSCPYYMRTGS
Sbjct: 121 AAPVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTT 180
Query: 150 LPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 209
+ SSG YAG P WS+ R YLS Q QSY+P + SQGI+PA W+ YMG+I P
Sbjct: 181 VTSSGFPYAGGFPAWSMPRMSYLSG--QAIQSYVPPFLPSSQGIMPALSWSNYMGSINPA 238
Query: 210 SPTSIAGSNLIYSSRN-QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 268
PT GSNL+Y N G+ +G Q A + +LP+RP+QPDC+Y+M+TGTCKYG+D
Sbjct: 239 MPTGFIGSNLVYDYMNPAGETLSGGQ-----AMNSSLPDRPEQPDCKYFMSTGTCKYGSD 293
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
CKFHHPKERIAQ+ + I PLGLP RPG AICS Y +YG+CKFGPTC+FDHP NY
Sbjct: 294 CKFHHPKERIAQTLS--INPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNY 351
Query: 329 GLSLPPLSILDSSLM-NHQAISATHSIETSPDASSKIPNWVQNSDA 373
GL P LS+ D+SL+ N + +S ETSP S + +Q SD
Sbjct: 352 GLPSPTLSVFDASLLTNPRRLSTVQPAETSPSKQST--DKLQQSDT 395
>gi|356554539|ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 417
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/446 (52%), Positives = 282/446 (63%), Gaps = 62/446 (13%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MP+NRQV NA S+DNIEEAI RLKI+DN + AQ++ YP RPGEP+CL+Y RTG
Sbjct: 1 MPENRQVLRNA---DSSDNIEEAIRRLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTG 57
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
CGYGSNCR++HPA+ + G Y EELP+R GQPDC Y+LKTG CKYGSTCKYHHPKDR G
Sbjct: 58 ACGYGSNCRYHHPAHISIGTHYGEELPQRAGQPDCEYFLKTGMCKYGSTCKYHHPKDRRG 117
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGS-------------------------------- 148
A PVSFN LG PMRQ+EKSCPYYMRTGS
Sbjct: 118 AAPVSFNTLGFPMRQEEKSCPYYMRTGSCKFGVACKFHHPQYASLGAYPLAGGPPTPTST 177
Query: 149 FLPSSGLQYAGSLPTWS-LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG 207
+P+SGL YAG P WS + R YLS QG QSY+P + SQG++P WN YMGN+
Sbjct: 178 IIPTSGLSYAGGFPAWSAVPRMSYLSG--QGLQSYVPPFLPSSQGVIPVQSWNNYMGNMN 235
Query: 208 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 267
P P GSNL+Y N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG+
Sbjct: 236 PAMPNGFLGSNLVYDYMNLGEPLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYGS 290
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 327
DCKFHHPKERI+QS I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P N
Sbjct: 291 DCKFHHPKERISQSL---INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQN 347
Query: 328 YGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNST 387
YGL+ P +++LD+ L + +S ETSP S N +Q+SDA +
Sbjct: 348 YGLTSPAMNVLDTPLT--RGLSNVQPPETSPSKLSS-DNKLQHSDAKAA----------- 393
Query: 388 TKNSDDSSKVDHPPHSVPNCSEPPHD 413
D S + D +S P +EP HD
Sbjct: 394 --TEDSSKQDDTTSNSFPASAEPLHD 417
>gi|356501261|ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 1 [Glycine max]
gi|356501263|ref|XP_003519445.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 2 [Glycine max]
Length = 415
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/446 (52%), Positives = 286/446 (64%), Gaps = 64/446 (14%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MP+NRQV NA S DNIEEAI LKI+DN + AQ++ YP RPGEP+CL+Y RTG
Sbjct: 1 MPENRQVLRNA---DSGDNIEEAIRHLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTG 57
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+CGYG+NCR++HPA+ + G Y EELP+R GQPDC Y+LKTGTCKYGSTCKYHHPKDR G
Sbjct: 58 MCGYGTNCRYHHPAHISIGTHYGEELPQRAGQPDCEYFLKTGTCKYGSTCKYHHPKDRRG 117
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGS-------------------------------F 149
A PVSFN LGLPMRQ+EKSCPYYMRTGS
Sbjct: 118 AAPVSFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQHASLGAYPLAGSPTPTSTI 177
Query: 150 LPSSGLQYAGSLPTWS-LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP 208
+P+SGL YAG P WS + R YLS QG QSY+P +S SQG++P WN YMGN+ P
Sbjct: 178 IPTSGLPYAGGFPAWSAVPRMSYLSG--QGLQSYVPPFLSSSQGVIPVQSWNNYMGNMNP 235
Query: 209 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 268
P GSNL+Y N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG+D
Sbjct: 236 AMPNGFLGSNLVYDYMNLGESLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYGSD 290
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
CKFHHPKER++QS I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P NY
Sbjct: 291 CKFHHPKERMSQSL---INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNY 347
Query: 329 GLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTT 388
GL+ P +++LD+ L + +S ETSP S +Q+SDA +
Sbjct: 348 GLTSPAMNVLDTPLT--RGLSNVQPPETSPSKLSD--KKLQHSDAKAA------------ 391
Query: 389 KNSDDSSKVDHPP-HSVPNCSEPPHD 413
++DSSK D +S P +EP H+
Sbjct: 392 --TEDSSKQDDTTLNSFPASAEPLHN 415
>gi|18390466|ref|NP_563725.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|42571337|ref|NP_973759.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|62901489|sp|Q94AD9.1|C3H3_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 3;
Short=AtC3H3; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 4
gi|15081721|gb|AAK82515.1| At1g04990/F13M7_1 [Arabidopsis thaliana]
gi|21360515|gb|AAM47373.1| At1g04990/F13M7_1 [Arabidopsis thaliana]
gi|225897880|dbj|BAH30272.1| hypothetical protein [Arabidopsis thaliana]
gi|332189654|gb|AEE27775.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|332189655|gb|AEE27776.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
Length = 404
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/427 (45%), Positives = 250/427 (58%), Gaps = 68/427 (15%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K+++ GV + +PYP RPGE DC FY RTG
Sbjct: 5 MSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
LCGYGS+CR+NHP + Q A Y+EELPER GQPDC Y+LKTG CKYG TCKYHHPKDRN
Sbjct: 61 LCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRN 120
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTG-------------------------SFLPSSG 154
GA PV FN++GLPMR EK CPYY+RTG S P++
Sbjct: 121 GAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAAD 180
Query: 155 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 214
L+YA L S R Q QSY+P++VSPSQG +P GW YM
Sbjct: 181 LRYASGLTMMSTYGT---LPRPQVPQSYVPILVSPSQGFLPPQGWAPYM----------- 226
Query: 215 AGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
A SN +Y+ +NQ G+ A M + A ++ L E DQP+CR++MNTGTCKYG DCK+ H
Sbjct: 227 AASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSH 286
Query: 274 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSL 332
P RI+Q S I P LP+RPGQ C N+ YG CKFGP C+FDHP YP + SL
Sbjct: 287 PGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSL 346
Query: 333 PPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSD 392
P + S + HQ IS T PN SD+ S+ + PD+K K S
Sbjct: 347 P--TPFASPVTTHQRISPT-------------PN---RSDSKSLSNGKPDVK----KESS 384
Query: 393 DSSKVDH 399
++ K D+
Sbjct: 385 ETEKPDN 391
>gi|297848754|ref|XP_002892258.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338100|gb|EFH68517.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/426 (46%), Positives = 252/426 (59%), Gaps = 68/426 (15%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K++DN G +++PYP RPGE DC FY RTG
Sbjct: 5 MSDTQHVQSSMVSIRSSDKIEDAFRKMKVNDN----GGEESNPYPDRPGERDCQFYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQGAQY-REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
LCGYGS+CR+NHPA+ Q Y +EELPER GQPDC Y+LKTG CKYGSTCKYHHPKDRN
Sbjct: 61 LCGYGSSCRYNHPAHLPQDVAYHKEELPERIGQPDCEYFLKTGACKYGSTCKYHHPKDRN 120
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTG-------------------------SFLPSSG 154
GA PV FN++GLPMRQ EK CPYY+RTG S PS+G
Sbjct: 121 GAQPVMFNVIGLPMRQGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPSAG 180
Query: 155 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 214
LQYA L S R Q QSY+P++VSPSQG++P GW YM
Sbjct: 181 LQYASGLTMMSTYGT---LPRPQVPQSYVPIMVSPSQGLLPPQGWAPYM----------- 226
Query: 215 AGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
SN +Y+ +NQ G+ A M + A ++ L E +QP+CR++MNTGTCKYG DCK++H
Sbjct: 227 PASNSMYNVKNQPYYSGSSAPMAMAVALNRGLSESSEQPECRFFMNTGTCKYGDDCKYNH 286
Query: 274 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSL 332
P RI+Q + I P LP+RPGQ C N+ YG CKFG C+FDHP Y + SL
Sbjct: 287 PGVRISQPPPNLINPFVLPARPGQPACGNFRSYGFCKFGRNCKFDHPMLPYQGLTMASSL 346
Query: 333 PPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSD 392
P + S + HQ IS + PN SD+ S+ + PD+K K S
Sbjct: 347 P--TPYASPVSTHQRISPS-------------PN---RSDSKSLSNGKPDVK----KESS 384
Query: 393 DSSKVD 398
++ K D
Sbjct: 385 ETEKAD 390
>gi|359488091|ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3-like [Vitis vinifera]
Length = 324
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 206/293 (70%), Gaps = 37/293 (12%)
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
+R GQPDCGYYLKT TCKYGS CKYHH +DR AGPVS NI+GL MRQ+EK C YYMRTG
Sbjct: 26 KRIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVSLNIVGLSMRQEEKPCSYYMRTG 85
Query: 148 -----------------------------------SFLPSSGLQYAGSLPTWSLQRAPYL 172
S PSSGL Y G +P W L RAPY+
Sbjct: 86 LCKFGVACKFHHLQPASIGTVLPVTGSVAFGSTGISITPSSGLSYVGGIPAWLLPRAPYM 145
Query: 173 SS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 231
R+QG Q+YMP+++SPSQGI+PA GWNTYMGN+ P+S TSI GSNL+Y+++N + +
Sbjct: 146 PGPRMQGPQTYMPIVLSPSQGIIPAQGWNTYMGNMSPISSTSILGSNLVYNTKNPSESSS 205
Query: 232 GAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL 291
Q+H+LS S +LPER DQP+C Y+M+TG+CKY +DCK+HHPKERIA A + +GPL L
Sbjct: 206 NGQVHLLSLSIPHLPERRDQPECXYFMSTGSCKYDSDCKYHHPKERIAXLATNTLGPLDL 265
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY-PINYGLSLPPLSILDSSLM 343
PSRPGQA+C +Y++YG+ ++GPTC+FDHP GY NY LSLPPLSIL+ SL+
Sbjct: 266 PSRPGQAVCFHYNLYGLYRYGPTCKFDHPLTGYSSYNYCLSLPPLSILEPSLL 318
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYLK 100
P R +P+C ++ TG C Y S+C+++HP A A +LP R GQ C +Y
Sbjct: 220 PERRDQPECXYFMSTGSCKYDSDCKYHHPKERIAXLATNTLGPLDLPSRPGQAVCFHYNL 279
Query: 101 TGTCKYGSTCKYHHP 115
G +YG TCK+ HP
Sbjct: 280 YGLYRYGPTCKFDHP 294
>gi|7211990|gb|AAF40461.1|AC004809_19 Contains similarity to zinc finger protein from Arabidopsis
thaliana gb|AC018363. EST gb|AA713271 comes from this
gene [Arabidopsis thaliana]
Length = 396
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/427 (45%), Positives = 247/427 (57%), Gaps = 72/427 (16%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K+++ GV + +PYP RPGE DC FY RTG
Sbjct: 1 MSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFYLRTG 56
Query: 61 LCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
LCGYGS+CR+NHP + Q A Y+EELPER GQPDC +TG CKYG TCKYHHPKDRN
Sbjct: 57 LCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDC----ETGACKYGPTCKYHHPKDRN 112
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTG-------------------------SFLPSSG 154
GA PV FN++GLPMR EK CPYY+RTG S P++
Sbjct: 113 GAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAAD 172
Query: 155 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 214
L+YA L S R Q QSY+P++VSPSQG +P GW YM
Sbjct: 173 LRYASGLTMMSTYGT---LPRPQVPQSYVPILVSPSQGFLPPQGWAPYM----------- 218
Query: 215 AGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
A SN +Y+ +NQ G+ A M + A ++ L E DQP+CR++MNTGTCKYG DCK+ H
Sbjct: 219 AASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSH 278
Query: 274 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSL 332
P RI+Q S I P LP+RPGQ C N+ YG CKFGP C+FDHP YP + SL
Sbjct: 279 PGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSL 338
Query: 333 PPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSD 392
P + S + HQ IS T PN SD+ S+ + PD+K K S
Sbjct: 339 P--TPFASPVTTHQRISPT-------------PN---RSDSKSLSNGKPDVK----KESS 376
Query: 393 DSSKVDH 399
++ K D+
Sbjct: 377 ETEKPDN 383
>gi|148907689|gb|ABR16973.1| unknown [Picea sitchensis]
Length = 504
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 175/384 (45%), Positives = 214/384 (55%), Gaps = 63/384 (16%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKI--HDNQEGGGVAQASPYPARPGEPDCLFYRR 58
M +N ++ + D +EEA+ ++ I HD E G + + PYP RPGE DC +Y R
Sbjct: 45 MHENWHLRPRPSPSLPGDALEEAMLQMTIQSHDPLEEIGTS-SGPYPERPGEQDCAYYMR 103
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
TGLCGYG NC FNHP + AQY ELPER GQP+C +++KTG CKYG+TCKYHHP+DR
Sbjct: 104 TGLCGYGMNCHFNHPPNVKRAAQYMNELPERFGQPECKHFMKTGVCKYGATCKYHHPRDR 163
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTG------------------------------- 147
+G+ V N LGLPMRQ EK CPYYMRTG
Sbjct: 164 DGSK-VQLNYLGLPMRQGEKECPYYMRTGSCKYGVTCKFHHSDPTALLPDSGSPVYAAAE 222
Query: 148 -SFLPSSGLQYAGSLPTWSLQRAPYLSSR-LQGTQSYMPLIVSPSQGIVPA-PGWNTYMG 204
S P+SG Y L +WSLQRAPY+S LQG+ +YMP+I+SP Q PGW+TY G
Sbjct: 223 LSLSPASGSTYPAGLASWSLQRAPYVSGPCLQGSPTYMPVILSPQQSTPSVQPGWSTYHG 282
Query: 205 NIGPLSP---TSIAGSNLIYSSRN------------------QGDLGA----GAQMHILS 239
I PLS G+ +YSS QG A G Q + +
Sbjct: 283 PISPLSSPEGKRQLGTGTVYSSSYMTGSSSSRHMRGALSPPVQGSSTAMEHPGVQSQVAA 342
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 299
+ PERPDQP C++YM TG CKYG C++HHPKER+A S GLP RPGQ
Sbjct: 343 PQREAFPERPDQPQCQHYMKTGCCKYGTTCRYHHPKERVALSPWCMFSSQGLPLRPGQPT 402
Query: 300 CSNYSMYGICKFGPTCRFDHPYAG 323
C YS YGICKFGP C+FDH G
Sbjct: 403 CPFYSRYGICKFGPICKFDHSLTG 426
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----------YAAQGAQYREELPER 89
Q +P RP +P C Y +TG C YG+ CR++HP +++QG LP R
Sbjct: 344 QREAFPERPDQPQCQHYMKTGCCKYGTTCRYHHPKERVALSPWCMFSSQG------LPLR 397
Query: 90 NGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN 127
GQP C +Y + G CK+G CK+ H P +F+
Sbjct: 398 PGQPTCPFYSRYGICKFGPICKFDHSLTGPNCNPAAFS 435
>gi|297826741|ref|XP_002881253.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
gi|297327092|gb|EFH57512.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/465 (41%), Positives = 264/465 (56%), Gaps = 90/465 (19%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
+QV+++ + +S + I++ R+K++++ + Q+SPYP RPGE DC F+ RTG CGY
Sbjct: 6 QQVQNSTGSIRSPEKIQDTFRRMKVNED----NMEQSSPYPDRPGERDCQFFLRTGQCGY 61
Query: 65 GSNCRFNHP-AYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
G+ CR+NHP + QG Y+++LPER GQPDC Y+LKTG CKYG TCKYHHPKDRNGAG
Sbjct: 62 GNTCRYNHPLTHLPQGVIYYKDQLPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAG 121
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTG--------------------------SFLPSSGLQ 156
PV FN+LG PMRQ EKSCPYYM+TG S PS G
Sbjct: 122 PVLFNVLGFPMRQGEKSCPYYMQTGLCRFGVACKFHHPHPQPSNGHSAYALSSFPSVGFP 181
Query: 157 YAGSLPTWSLQRAPY---LSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 213
YA + SL A Y ++ +Q+YMP +V+PSQG++P GW TYM
Sbjct: 182 YASGMTMVSLPPATYGAMARPQVPQSQAYMPFMVAPSQGLLPPQGWATYM---------- 231
Query: 214 IAGSNLIYSSRNQGDLGAGAQMHI-LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
A SN IYS + Q D + A + + +++ + ER +CR++MNTGTCKYG DCK+
Sbjct: 232 -AASNPIYSVKAQPDSSSSASVPVAMTSHYHSFSER---AECRFFMNTGTCKYGDDCKYS 287
Query: 273 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN-YGLS 331
HPKER+ QS + + P+ LP+RPGQ C N+ YG CKFG +C+FDH P N GL+
Sbjct: 288 HPKERLLQSPPNLLNPIVLPARPGQPACGNFKAYGFCKFGASCKFDHSMPLNPYNTTGLA 347
Query: 332 L----------PPLSI-----------LDSSLMNHQAISA-THSIETSP-DASSKIP--N 366
+ PP+S S+L N + +A T S+ET D S P +
Sbjct: 348 MSSLPTPNPYAPPVSTNLRISSPPSPPDSSTLSNGKPGAAETQSLETEKQDDSPAQPEKS 407
Query: 367 WVQN------SDAVSVQHQNPDMKNSTTKNS--------DDSSKV 397
VQ+ SD+ S+ + PD +N +++N DSSKV
Sbjct: 408 EVQDSLPPSCSDSTSLPNVKPDSENPSSENEKQDDNTIQQDSSKV 452
>gi|18403134|ref|NP_565758.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
gi|62901127|sp|O48772.1|C3H26_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 26;
Short=AtC3H26; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN2
gi|4928919|gb|AAD33770.1|AF138744_1 zinc finger protein 2 [Arabidopsis thaliana]
gi|2702272|gb|AAB91975.1| expressed protein [Arabidopsis thaliana]
gi|330253669|gb|AEC08763.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
Length = 453
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 251/459 (54%), Gaps = 88/459 (19%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
+QV+++ + +S D IE+ R+K++++ + Q+SPYP RPGE DC F+ RTG CGY
Sbjct: 6 QQVQNSTGSIRSPDKIEDTFRRMKVNED----NMEQSSPYPDRPGERDCQFFLRTGQCGY 61
Query: 65 GSNCRFNHP-AYAAQG-AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
G++CR+NHP QG YR++LPER GQPDC +TG CKYG TCKYHHPKDRNGAG
Sbjct: 62 GNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDC----ETGACKYGPTCKYHHPKDRNGAG 117
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTG----------------------------SFLPSSG 154
PV FN+LGLPMRQ EK CPYYM+TG S PS G
Sbjct: 118 PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVG 177
Query: 155 LQYAGSLPTWSLQRAPYLS---SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 211
YA + SL A Y + ++ +Q+YMP +V+PSQG++P GW TYM
Sbjct: 178 FPYASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYM-------- 229
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
SN IY+ + Q D + A + + S + ++ +CR++MNTGTCKYG DCK+
Sbjct: 230 ---TASNPIYNMKTQLDSSSSASVAVTVTSHHH--SFSERAECRFFMNTGTCKYGDDCKY 284
Query: 272 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH------------ 319
HPKER+ QS + + P+ LP+RPGQ C N+ YG CKFG C+FDH
Sbjct: 285 SHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGL 344
Query: 320 -------PYAGYP---INYGLSLPPLSILDSSLMNHQ-AISATHSIETSP-DASSKIPNW 367
PY P N +S PP ++L N + A + S+ET D S P
Sbjct: 345 AMSSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDDSPTEPEK 404
Query: 368 VQ--------NSDAVSVQHQNPDMKNSTTKNSDDSSKVD 398
+ SD+ S+ + PD + T K DDS+++D
Sbjct: 405 SEVEDSLPPNGSDSTSLPNDKPDAE--TEKQDDDSAELD 441
>gi|334184645|ref|NP_001189661.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
gi|330253670|gb|AEC08764.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
Length = 467
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 251/459 (54%), Gaps = 88/459 (19%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
+QV+++ + +S D IE+ R+K++++ + Q+SPYP RPGE DC F+ RTG CGY
Sbjct: 6 QQVQNSTGSIRSPDKIEDTFRRMKVNED----NMEQSSPYPDRPGERDCQFFLRTGQCGY 61
Query: 65 GSNCRFNHP-AYAAQG-AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
G++CR+NHP QG YR++LPER GQPDC +TG CKYG TCKYHHPKDRNGAG
Sbjct: 62 GNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDC----ETGACKYGPTCKYHHPKDRNGAG 117
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTG----------------------------SFLPSSG 154
PV FN+LGLPMRQ EK CPYYM+TG S PS G
Sbjct: 118 PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVG 177
Query: 155 LQYAGSLPTWSLQRAPYLS---SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 211
YA + SL A Y + ++ +Q+YMP +V+PSQG++P GW TYM
Sbjct: 178 FPYASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYM-------- 229
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
SN IY+ + Q D + A + + S + ++ +CR++MNTGTCKYG DCK+
Sbjct: 230 ---TASNPIYNMKTQLDSSSSASVAVTVTSHHH--SFSERAECRFFMNTGTCKYGDDCKY 284
Query: 272 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH------------ 319
HPKER+ QS + + P+ LP+RPGQ C N+ YG CKFG C+FDH
Sbjct: 285 SHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGL 344
Query: 320 -------PYAGYP---INYGLSLPPLSILDSSLMNHQ-AISATHSIETSP-DASSKIPNW 367
PY P N +S PP ++L N + A + S+ET D S P
Sbjct: 345 AMSSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDDSPTEPEK 404
Query: 368 VQ--------NSDAVSVQHQNPDMKNSTTKNSDDSSKVD 398
+ SD+ S+ + PD + T K DDS+++D
Sbjct: 405 SEVEDSLPPNGSDSTSLPNDKPDAE--TEKQDDDSAELD 441
>gi|224285149|gb|ACN40302.1| unknown [Picea sitchensis]
Length = 468
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 226/398 (56%), Gaps = 76/398 (19%)
Query: 20 IEEAIWRLKI---HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP--- 73
+EEA+W++ + H+N E A+ P+P RPGEPDC +Y RTGLCG+G +CRFNHP
Sbjct: 37 VEEAMWQMSLQQQHENME----AEVGPFPERPGEPDCTYYMRTGLCGFGMSCRFNHPPNR 92
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLP 132
AA A+ + E PER GQP+C YYLKTG+CK+G+TCK+HHP+D+ G+ G N+ G P
Sbjct: 93 KQAAAAARNKGEYPERLGQPECQYYLKTGSCKFGATCKFHHPRDKAGSTGRAVINVYGYP 152
Query: 133 MRQDEKSCPYYMRTG-----------------SFLPSSGLQ---------------YAGS 160
+R +EK C YYMRTG + +P G Y GS
Sbjct: 153 LRPNEKECAYYMRTGQCKYGATCKFHHPQPVSTLVPVRGSSLFTPVHSPTTPGPQPYPGS 212
Query: 161 LPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPT----SI 214
LPTW +QRAP++ S R QG SY PLI+ QGI+P P W+TY G +G +S +
Sbjct: 213 LPTWPMQRAPFIQSPRWQGPSSYAPLIL--PQGIMPVPSWSTYPPGQVGSISSSDGQQQA 270
Query: 215 AGSNLIYSSRNQGD-LGAGAQ-----------------MHILSASSQN---LPERPDQPD 253
G+ L+Y +Q D + +G Q + + S+S+Q PERP Q +
Sbjct: 271 MGAGLVYGPSSQTDPMASGIQGTLSHFPPGSPGMGPPTLQLPSSSAQRESMFPERPGQQE 330
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C++YM TG CK+G C++HHPKERI + LGLP RPG C+ ++ YGICKFG
Sbjct: 331 CQFYMKTGDCKFGMTCRYHHPKERIIPVPNCVLNSLGLPLRPGAPACTFFTRYGICKFGA 390
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISAT 351
TC+FDHP + +S P +D S+ HQ SA+
Sbjct: 391 TCKFDHPMGHSSYSQSISSP----IDISVGRHQIGSAS 424
>gi|357507737|ref|XP_003624157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355499172|gb|AES80375.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 418
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/367 (42%), Positives = 211/367 (57%), Gaps = 61/367 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMSLRPSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+ NILG P+R +
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 137 EKSCPYYMRTGS-----------------FLPSSG---------------LQYAGSLPTW 164
E C YY+RTG LP G YA + W
Sbjct: 124 ESECAYYLRTGQCKFGNTCKFHHPQPSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNW 183
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
S + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP ++ Y +
Sbjct: 184 ST--SSYIPSPRWQGPSSYAPLIL--PQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGT 239
Query: 224 RNQGD-LGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADC 269
+QGD AG Q + + +N+ PERPDQP+C++YM TG CK+GA C
Sbjct: 240 SHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVC 299
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 329
+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP + Y
Sbjct: 300 RFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIF--TYN 357
Query: 330 LSLPPLS 336
+S PL+
Sbjct: 358 VSASPLA 364
>gi|359476779|ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 208/364 (57%), Gaps = 59/364 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ ++ PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 26 QDAMWQMNLRSSE----TMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAI 81
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG VS NILG P+R D
Sbjct: 82 ATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPD 141
Query: 137 EKSCPYYMRTGSFL-----------PSSGL---------------------QYAGSLPTW 164
E C YY+RTG PSS + YAG + W
Sbjct: 142 EIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVYPSVPSPTTPGQQSYAGGITNW 201
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPT--SIAGSNLIY 221
L RA ++ S R Q SY PL++ QG+V PGWN Y G +G S + G+N IY
Sbjct: 202 PLSRASFIPSPRWQAPSSYAPLML--PQGVVSVPGWNAYSGQLGSPSESQQQTGGNNQIY 259
Query: 222 -SSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGA 267
+SR G+Q + + +N+ PERP QP+C++YM TG CK+GA
Sbjct: 260 GTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDCKFGA 319
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 327
C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 320 VCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYN 379
Query: 328 YGLS 331
S
Sbjct: 380 LSAS 383
>gi|186477892|gb|ACC85690.1| zinc finger protein [Medicago sativa]
gi|400530100|gb|AFP86282.1| zinc finger protein [Medicago sativa]
Length = 418
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 208/367 (56%), Gaps = 61/367 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMSLRPSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+ NILG P+R +
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 137 EKSCPYYMRTGS-----------------FLPSSG---------------LQYAGSLPTW 164
E C YY+RTG LP G YA + W
Sbjct: 124 ESECAYYLRTGQCKFGNTCKFHHPQPSNMVLPMRGSPVYPTVQSPTTAGQQSYAAGITNW 183
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
S + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP ++ Y +
Sbjct: 184 ST--SSYIPSPRWQGPSSYAPLIL--PQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGT 239
Query: 224 RNQGD-------------LGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADC 269
+QGD + + +N+ PERPDQP+C++YM TG CK+GA C
Sbjct: 240 SHQGDPENAGLPGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVC 299
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 329
+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP + Y
Sbjct: 300 RFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIF--TYN 357
Query: 330 LSLPPLS 336
+S PL+
Sbjct: 358 VSASPLA 364
>gi|148907602|gb|ABR16930.1| unknown [Picea sitchensis]
Length = 554
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 202/371 (54%), Gaps = 63/371 (16%)
Query: 16 SADNIEEAIWRLKIHDNQEGGGV-AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+A++++E++ R+ + + + YP R G+ DC Y RTG CGYG NCRFNHP
Sbjct: 45 AAESMKESMRRMTLQPQDSRSRMNGYSESYPERFGQADCSHYMRTGYCGYGMNCRFNHPT 104
Query: 75 -YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
Q A+ + ELPER G C +Y+KTGTCK+G+TCKYHHP+DR GAG V N++GLPM
Sbjct: 105 NMKLQAARNKGELPERVGHNACQFYMKTGTCKFGATCKYHHPRDRLGAGQVQLNMIGLPM 164
Query: 134 RQDEKSCPYYMRTG-----------------------------------SFLPSSGLQYA 158
R EK C YY+RTG P+S QY+
Sbjct: 165 RMGEKECTYYIRTGYCKYGASCKYDHPQPAALGTLVPVSGSPLYATIRPPIAPASATQYS 224
Query: 159 GSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS--- 213
LPTW R PY S + G YMP++ SP QG++ A GW TY PL SP S
Sbjct: 225 PGLPTWPSPRTPYRQSPHMPGALPYMPVMYSPHQGMLAASGWGTYQSPASPLTSPESQQQ 284
Query: 214 IAGSNLIYSSRNQGDLGAGAQMHILS---------------------ASSQNLPERPDQP 252
+ N++Y+S L G +++ ++ PERP QP
Sbjct: 285 LRRMNIMYNSTQPNGLSVGGVQGLITPFAQGSSAAVGHQPGHFQPNRTQTETYPERPGQP 344
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
+C+YY+ TG CK+G C++HHP ER++QS+ + P+GLP RP Q C+ YS YGICKFG
Sbjct: 345 ECQYYIKTGDCKFGFACRYHHPHERVSQSSTCVLSPIGLPLRPTQPTCTYYSHYGICKFG 404
Query: 313 PTCRFDHPYAG 323
PTC+FDHP AG
Sbjct: 405 PTCKFDHPMAG 415
>gi|255543128|ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 448
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 224/416 (53%), Gaps = 71/416 (17%)
Query: 16 SADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-- 73
SA E+A+W++ + ++ + PYP PGEPDC +Y RTGLC +G+ CRFNHP
Sbjct: 30 SASLNEDAMWQMNLRSSE----TMDSGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPN 85
Query: 74 -AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGL 131
A A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHPKD+ G AG VS NILG
Sbjct: 86 RKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDKAGIAGRVSLNILGY 145
Query: 132 PMRQDEKSCPYYMRTGS-----------------FLPSSG---------------LQYAG 159
P+R +E C YY+RTG +P G Y G
Sbjct: 146 PLRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVQSPTTPGQQSYTG 205
Query: 160 SLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---TSIA 215
+ WS RA +++S R Q SY PLI+ QG+V PGWN Y G +G +S
Sbjct: 206 GVTNWS--RASFITSPRWQAPSSYTPLIL--PQGVVSVPGWNAYSGQLGSVSSPEGQQQT 261
Query: 216 GSNLIYSSRNQGD---LGAGAQMHILSASSQ-----------NLPERPDQPDCRYYMNTG 261
G++ IY + Q + G+ + L A S PERP QP+C++YM TG
Sbjct: 262 GNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFYALQRDNVFPERPGQPECQFYMKTG 321
Query: 262 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YG+CKFGP+C+FDHP
Sbjct: 322 DCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKFDHPM 381
Query: 322 AGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD 372
+ Y LS P P+ L S A+ T S E DA S P + S+
Sbjct: 382 GIF--TYNLSAPSSADAPVRRLLGSSSGSAAL--TLSTEGLVDAGSTKPRRLSLSE 433
>gi|356531906|ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 209/371 (56%), Gaps = 59/371 (15%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
V S D + +A+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFN
Sbjct: 9 VWTCSYDVVSDAMWQINLRSSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFN 64
Query: 72 HP---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HP A A+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ N
Sbjct: 65 HPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMN 124
Query: 128 ILGLPMRQDEKSCPYYMRTGS------------------------------FLPSSGLQ- 156
ILG P+R +E C YY+RTG P++ Q
Sbjct: 125 ILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGQQ 184
Query: 157 -YAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 214
YA + WS + Y+ S R QG SY PLI+ QG+V PGW+ Y G +G SP
Sbjct: 185 SYATGITNWS--SSSYIPSPRWQGPSSYAPLIL--PQGMVSVPGWSAYSGQMGSDSPQQT 240
Query: 215 AGSNLIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNT 260
G+ Y + Q G GA +Q + +N+ PERPDQP+C++YM T
Sbjct: 241 MGNGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKT 300
Query: 261 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 301 GDCKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 360
Query: 321 YAGYPINYGLS 331
+ N S
Sbjct: 361 MGVFTYNISAS 371
>gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 63;
Short=OsC3H63
gi|108864370|gb|ABA93650.2| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
Length = 444
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 221/410 (53%), Gaps = 67/410 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EEA+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 36 EEAMWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAV 89
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +
Sbjct: 90 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPN 149
Query: 137 EKSCPYYMRTG-------------------------------SFLPSSGLQYAGSLPTWS 165
EK C YY+RTG S S Y G++ W
Sbjct: 150 EKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWP 209
Query: 166 LQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP----TSIAGSNL 219
L R A +++S R G SY +IV P G+V PGWN Y IG S + G+
Sbjct: 210 LSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQY 267
Query: 220 IYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKYG 266
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+G
Sbjct: 268 YTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFG 327
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
A CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP +
Sbjct: 328 AVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGT--V 385
Query: 327 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 386 MYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 432
>gi|222615948|gb|EEE52080.1| hypothetical protein OsJ_33853 [Oryza sativa Japonica Group]
Length = 529
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 221/410 (53%), Gaps = 67/410 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EEA+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 121 EEAMWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAV 174
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +
Sbjct: 175 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPN 234
Query: 137 EKSCPYYMRTG-------------------------------SFLPSSGLQYAGSLPTWS 165
EK C YY+RTG S S Y G++ W
Sbjct: 235 EKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWP 294
Query: 166 LQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP----TSIAGSNL 219
L R A +++S R G SY +IV P G+V PGWN Y IG S + G+
Sbjct: 295 LSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQY 352
Query: 220 IYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKYG 266
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+G
Sbjct: 353 YTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFG 412
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
A CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP +
Sbjct: 413 AVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMG--TV 470
Query: 327 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 471 MYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 517
>gi|224128808|ref|XP_002328972.1| predicted protein [Populus trichocarpa]
gi|222839206|gb|EEE77557.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 206/365 (56%), Gaps = 65/365 (17%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
+ +A+W++ + ++ +A PYP RPGEPDC +Y RTGLC +G+ CRFNHP
Sbjct: 9 SFSDAMWQMNLRSSE----TMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRKL 64
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
A A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G +G VS NILG P++
Sbjct: 65 AIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPLQ 124
Query: 135 QDEKSCPYYMRTGS-----------------FLPSSG---------------LQYAGSLP 162
+E C YY+RTG +P G Y G L
Sbjct: 125 PNEIECAYYLRTGQCKFGSTCKFHHPQPTNMMVPLRGSPIYPTVSSPTTPGQQSYPGGLA 184
Query: 163 -TWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG----PLSPTSIAG 216
TWS RA +++S R Q SY PLI+ QG+V PGWN Y G +G P S
Sbjct: 185 TTWS--RASFITSPRWQAPSSYTPLIL--PQGVVSVPGWNAYSGQLGSVSSPESQQQTGN 240
Query: 217 SNLIYSSRNQGDLGAGAQ--------------MHILSASSQNLPERPDQPDCRYYMNTGT 262
S + +SR+ + AG+Q + L S PERP QP+C++YM TG
Sbjct: 241 SQIYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESV-FPERPGQPECQFYMKTGD 299
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 300 CKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMG 359
Query: 323 GYPIN 327
+ N
Sbjct: 360 VFTYN 364
>gi|124359159|gb|ABD28369.2| Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago
truncatula]
Length = 428
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 211/377 (55%), Gaps = 71/377 (18%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMSLRPSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCG----------YYLKTGTCKYGSTCKYHHPKDRNG-AGPVSF 126
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+
Sbjct: 64 ATARMKGEFPERLGQPECQASVNECCIMHYYLKTGTCKFGATCRFHHPKDKAGVAGRVAL 123
Query: 127 NILGLPMRQDEKSCPYYMRTGS-----------------FLPSSG--------------- 154
NILG P+R +E C YY+RTG LP G
Sbjct: 124 NILGYPLRPNESECAYYLRTGQCKFGNTCKFHHPQPSNMVLPMRGSPVYPTVQSPTTAGQ 183
Query: 155 LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 213
YA + WS + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP
Sbjct: 184 QSYAAGITNWST--SSYIPSPRWQGPSSYAPLIL--PQGVVSVPGWSTYNGQMGSDSPQQ 239
Query: 214 IAGSNLIYSSRNQGD-LGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMN 259
++ Y + +QGD AG Q + + +N+ PERPDQP+C++YM
Sbjct: 240 TMRNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMK 299
Query: 260 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
TG CK+GA C+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDH
Sbjct: 300 TGDCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDH 359
Query: 320 PYAGYPINYGLSLPPLS 336
P + Y +S PL+
Sbjct: 360 PMGIF--TYNVSASPLA 374
>gi|356576638|ref|XP_003556437.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Glycine max]
Length = 416
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 209/362 (57%), Gaps = 49/362 (13%)
Query: 7 VKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGS 66
+++N N N ++++W + N G + YP RPGEPDC +Y RTGLC +G+
Sbjct: 1 METNNNLNLIVPNPQDSLWMM----NLRTGETMDSGSYPERPGEPDCSYYIRTGLCRFGA 56
Query: 67 NCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AG 122
CRFNHP A A+ E PER GQP+C YYLKTGTCK+G+TCK+HHPKD+ G AG
Sbjct: 57 TCRFNHPPNRRLAIATARMIGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDQAGIAG 116
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGS-----------------FLPSSGLQ-YAGSLPTW 164
V+ NILG P+R +E C YY+RTG L G + YAG + W
Sbjct: 117 RVALNILGYPLRPNEPECTYYLRTGQCKFGNTCKFHHPQPSNMMLSLRGQESYAGGITNW 176
Query: 165 SLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS----PTSIAGSNL 219
S R Y+ S R QG SY PLI+ QG+V PGW+ Y G +G +S P +
Sbjct: 177 S--RGSYIPSPRWQGPSSYGPLILP--QGVVSVPGWSAYSGQMGSISTSDSPQQAMRNGQ 232
Query: 220 IYSSRNQGDLG-AGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKY 265
Y + +QG+L AG+Q + + +N+ PERP QP+C++Y+ TG CK+
Sbjct: 233 TYETSHQGELANAGSQGAYSQFRSGTVPVGFYTLQRENIFPERPGQPECQFYVKTGDCKF 292
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325
GA C+FHHP+ER+ + + P+GLP R G+ +C YS YGICKFGP+C+FDHP +
Sbjct: 293 GAVCQFHHPRERLIPAPDCVLSPIGLPLRLGEPLCVFYSRYGICKFGPSCKFDHPMEIFS 352
Query: 326 IN 327
N
Sbjct: 353 YN 354
>gi|62901479|sp|Q9SWF9.1|ZFNL_PEA RecName: Full=Zinc finger CCCH domain-containing protein ZFN-like
gi|5616313|gb|AAD45720.1| zinc finger protein [Pisum sativum]
Length = 417
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 59/358 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMNLRSSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+ NILG P+R +
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 137 EKSCPYYMRTG-------------------------SFLPSS------GLQ-YAGSLPTW 164
E YY+RTG + P+ G Q YA + W
Sbjct: 124 ESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNW 183
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
S + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP ++ Y +
Sbjct: 184 S--SSSYVPSPRWQGPSSYAPLIL--PQGVVSVPGWSTYGGQMGSESPQQTMRNDQTYGT 239
Query: 224 RNQGDL-GAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADC 269
+QG+L AG Q + + N+ PERPDQP+C++YM TG CK+GA C
Sbjct: 240 SHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVC 299
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 327
+FHHP+ER + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 300 RFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYN 357
>gi|115485469|ref|NP_001067878.1| Os11g0472000 [Oryza sativa Japonica Group]
gi|113645100|dbj|BAF28241.1| Os11g0472000, partial [Oryza sativa Japonica Group]
Length = 414
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/411 (40%), Positives = 221/411 (53%), Gaps = 67/411 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YA 76
+ EA+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 5 VGEAMWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMA 58
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQ 135
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R
Sbjct: 59 VAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRP 118
Query: 136 DEKSCPYYMRTG-------------------------------SFLPSSGLQYAGSLPTW 164
+EK C YY+RTG S S Y G++ W
Sbjct: 119 NEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNW 178
Query: 165 SLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP----TSIAGSN 218
L R A +++S R G SY +IV P G+V PGWN Y IG S + G+
Sbjct: 179 PLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQ 236
Query: 219 LIYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKY 265
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+
Sbjct: 237 YYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKF 296
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325
GA CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP
Sbjct: 297 GAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMG--T 354
Query: 326 INYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
+ YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 355 VMYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 402
>gi|242070873|ref|XP_002450713.1| hypothetical protein SORBIDRAFT_05g013190 [Sorghum bicolor]
gi|241936556|gb|EES09701.1| hypothetical protein SORBIDRAFT_05g013190 [Sorghum bicolor]
Length = 446
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 231/429 (53%), Gaps = 67/429 (15%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-- 74
D + EA+W++ + + + PYP R GEPDC +Y RTG+C +G C+FNHPA
Sbjct: 30 VDQVAEAMWQMNLGETM---APMELGPYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADR 86
Query: 75 -YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLP 132
A A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P
Sbjct: 87 KLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYP 146
Query: 133 MRQDEKSCPYYMRTGSFL-----------PSSGL--------------------QYAGSL 161
+R +EK C YY+RTG PS+ + Y G++
Sbjct: 147 LRANEKECAYYLRTGQCKFGSTCKFHHPQPSTMMVAVRGSVYSPGQSATSPGQHAYQGAV 206
Query: 162 PTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---TSIAG 216
+W L R A +++S R G SY +IV P G+V PGW+ Y IG S G
Sbjct: 207 TSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSDDQQRTPG 264
Query: 217 SNLIYS-SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGT 262
+ Y+ SR G G G Q + + + +N+ PERPDQP+C++YM TG
Sbjct: 265 AAQYYTGSRQSGTAGIGDQGMFSSYQAGSVPVGLYAVQRENVFPERPDQPECQFYMKTGD 324
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDHP
Sbjct: 325 CKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDHPMG 384
Query: 323 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPD 382
YG + P S +SL A +H E SPD+ S + +SD+ Q P
Sbjct: 385 S--AMYGHASSPTSEAPTSL-RMLAHVPSHP-EVSPDSGSGRSRRIAHSDS----QQIPS 436
Query: 383 MKNSTTKNS 391
++ ST + +
Sbjct: 437 VERSTEREA 445
>gi|356531908|ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 426
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 205/361 (56%), Gaps = 59/361 (16%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQ 78
+A+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 17 DAMWQINLRSSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 72
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ NILG P+R +E
Sbjct: 73 AARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMNILGYPLRPNE 132
Query: 138 KSCPYYMRTGS------------------------------FLPSSGLQ--YAGSLPTWS 165
C YY+RTG P++ Q YA + WS
Sbjct: 133 PECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGQQSYATGITNWS 192
Query: 166 LQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSR 224
+ Y+ S R QG SY PLI+ QG+V PGW+ Y G +G SP G+ Y +
Sbjct: 193 --SSSYIPSPRWQGPSSYAPLIL--PQGMVSVPGWSAYSGQMGSDSPQQTMGNGQSYGTS 248
Query: 225 NQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCK 270
Q G GA +Q + +N+ PERPDQP+C++YM TG CK+GA C+
Sbjct: 249 RQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCR 308
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 330
FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 309 FHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISA 368
Query: 331 S 331
S
Sbjct: 369 S 369
>gi|168031758|ref|XP_001768387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680312|gb|EDQ66749.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 197/341 (57%), Gaps = 52/341 (15%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQ 78
EA W + + QEG Q PYP RPGEPDC++Y RTGLCG+G CR+NHP AA
Sbjct: 1 EAGWAMAM-QGQEGVDGGQG-PYPERPGEPDCVYYMRTGLCGFGMTCRYNHPPNRKLAAA 58
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDE 137
+ + E PER G P+C YYLKTGTCK+G+TCKYHHP+++ G+ G V N+LGLP+R E
Sbjct: 59 ATRGKGEYPERVGHPECQYYLKTGTCKFGATCKYHHPREKAGSTGRVHLNVLGLPLRLGE 118
Query: 138 KSCPYYMRTGS-------------------FLPSSGLQYAGSLPTWSLQRAPYLSSRLQG 178
K C YYMRTGS +P L + +P+W L R+P+ R+Q
Sbjct: 119 KECAYYMRTGSCKYGVTCKFHHPQPATVGGMVP---LPFGSGVPSWPLTRSPFPLPRMQA 175
Query: 179 TQSY---MPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
SY MPL QGI+ GWN Y + GP+ P ++ QG+ +G
Sbjct: 176 PSSYGTMMPL----QQGIMSMAGWN-YQVSQGPVGPAEGHQQGYVFGGAPQGEHVSGYGP 230
Query: 236 HILSASSQNLP----------------ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 279
++ +S+ LP ERP QP+C+YYM TG CK+G+ C++HHPK+R
Sbjct: 231 YMQGSSAVGLPAHQATQAVGGQETVFPERPGQPECQYYMKTGDCKFGSTCRYHHPKDRAT 290
Query: 280 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
S ++ P+GLP RPG CS YS YGICKFGPTC+FDHP
Sbjct: 291 PSPTCHLSPMGLPLRPGNPPCSFYSRYGICKFGPTCKFDHP 331
>gi|356568481|ref|XP_003552439.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 210/376 (55%), Gaps = 61/376 (16%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
V S D + +A+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFN
Sbjct: 9 VLTCSYDVVSDAMWQINLRSSE----TMESEPYPEHPGEPDCSYYIRTGLCRFGATCRFN 64
Query: 72 HP---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HP A A+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ N
Sbjct: 65 HPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVALN 124
Query: 128 ILGLPMRQDEKSCPYYMRTGSF-------------------LPSSGL------------- 155
ILG P+R +E C YY+RTG + SS +
Sbjct: 125 ILGYPLRPNEPECGYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGHQ 184
Query: 156 QYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 214
YA + WS + Y+ S R QG SY PLI+ QG+V GW+ Y G +G SP
Sbjct: 185 SYATGITNWS--SSSYIPSPRWQGPSSYAPLIL--PQGMVSVSGWSAYSGQMGSDSPQQT 240
Query: 215 AGSNLIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNT 260
+ Y + Q G GA +Q + +N+ PERPDQP+C++YM T
Sbjct: 241 MANGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKT 300
Query: 261 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G CK+GA C+FHHP ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 301 GDCKFGAVCRFHHPHERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 360
Query: 321 YAGYPINYGLSLPPLS 336
+ Y +S PL+
Sbjct: 361 MGVF--TYNMSASPLA 374
>gi|224146159|ref|XP_002325901.1| predicted protein [Populus trichocarpa]
gi|222862776|gb|EEF00283.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 203/361 (56%), Gaps = 63/361 (17%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQ 78
+A+W++ + ++ +A PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 1 DAMWQMNLRSSE----TMEAGPYPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIA 56
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G +G VS NILG P+R +E
Sbjct: 57 AARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLRLNE 116
Query: 138 KSCPYYMRTGS-----------------FLPSSG---------------LQYAGSLPT-W 164
C YY+RTG +P G Y G L T W
Sbjct: 117 MECAYYLRTGQCKFGSTCKFHHPQPTNVMVPLRGSPVYPTVNSPTTPGQQSYPGGLATNW 176
Query: 165 SLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG----PLSPTSIAGSNL 219
S RA +++S R Q +Y PLI+ QG+V PGWN Y G +G P S S +
Sbjct: 177 S--RASFITSPRWQAPSNYTPLIL--PQGVVSVPGWNAYSGQVGSVSSPESQQQTGNSQI 232
Query: 220 IYSSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYG 266
+SR + AG+Q M + +++ PERP QP+C++YM TG CK+G
Sbjct: 233 YGTSRQNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQFYMKTGDCKFG 292
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
A C+FHHP+ER+ + + +GLP RPG+ +C YS YGICKFGP+C+F HP +
Sbjct: 293 AVCRFHHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSCKFHHPMGIFTY 352
Query: 327 N 327
N
Sbjct: 353 N 353
>gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
gi|218185712|gb|EEC68139.1| hypothetical protein OsI_36059 [Oryza sativa Indica Group]
Length = 406
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 218/407 (53%), Gaps = 67/407 (16%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGA 80
+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A A
Sbjct: 1 MWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAA 54
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +EK
Sbjct: 55 RMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKE 114
Query: 140 CPYYMRTG-------------------------------SFLPSSGLQYAGSLPTWSLQR 168
C YY+RTG S S Y G++ W L R
Sbjct: 115 CAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWPLSR 174
Query: 169 -APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP----TSIAGSNLIYS 222
A +++S R G SY +IV P G+V PGWN Y IG S + G+
Sbjct: 175 SASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQYYTG 232
Query: 223 SR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADC 269
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+GA C
Sbjct: 233 SRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVC 292
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 329
KFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP + YG
Sbjct: 293 KFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGT--VMYG 350
Query: 330 LSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
L+ P D S A HS E SPD S + +SD+ +
Sbjct: 351 LATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 394
>gi|226493386|ref|NP_001141157.1| hypothetical protein [Zea mays]
gi|194702984|gb|ACF85576.1| unknown [Zea mays]
gi|224030547|gb|ACN34349.1| unknown [Zea mays]
gi|407232624|gb|AFT82654.1| C3H11 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413920883|gb|AFW60815.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 443
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 223/423 (52%), Gaps = 74/423 (17%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+ D + EA+W++ + + E G PYP R GEPDC +Y RTG+C +G C+FN
Sbjct: 25 IGVHGVDQVAEAMWQMNLEEAMELG------PYPERVGEPDCSYYMRTGMCRFGMTCKFN 78
Query: 72 HPA---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HPA A A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N
Sbjct: 79 HPADRKLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLN 138
Query: 128 ILGLPMRQDEKSCPYYMRTGSFL-----------PSSGL--------------------Q 156
LG P+R +EK C YY+RTG PS+ +
Sbjct: 139 ELGYPLRPNEKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAVRGSVYSPGQSATSPGQHA 198
Query: 157 YAGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP--- 211
Y G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 199 YQGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSEDQ 256
Query: 212 -----------------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPD 253
TSI G ++SS G + G + + +NL PERPDQP+
Sbjct: 257 QRTPGAAQYYTGSRQSGTSI-GDQGMFSSYQAGSVPVG----LYAVQRENLFPERPDQPE 311
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C++YM TG CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP
Sbjct: 312 CQFYMKTGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGP 371
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 373
C+FDHP YG + P S + + +H E SPD S + +SD+
Sbjct: 372 NCKFDHPMGN--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDS 428
Query: 374 VSV 376
+
Sbjct: 429 QQI 431
>gi|297598193|ref|NP_001045201.2| Os01g0917400 [Oryza sativa Japonica Group]
gi|62901482|sp|Q5JLB5.2|C3H12_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 12;
Short=OsC3H12; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 2
gi|57900442|dbj|BAD87735.1| putative zinc finger protein [Oryza sativa Japonica Group]
gi|215704392|dbj|BAG93826.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674001|dbj|BAF07115.2| Os01g0917400 [Oryza sativa Japonica Group]
gi|343466345|gb|AEM43044.1| CCCH-type zinc finger protein [Oryza sativa Indica Group]
Length = 439
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 193/358 (53%), Gaps = 58/358 (16%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
E +W+ G G Q PYP R GEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 58 EGMWQ---QMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 114
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R E
Sbjct: 115 SARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSE 174
Query: 138 KSCPYYMRTGS-------------------------FLPS------SGLQYAGSLPTWSL 166
K C YY++TG PS +G Y G++ +W+
Sbjct: 175 KECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAF 234
Query: 167 QRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA----GSNLIY 221
R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S + G+ Y
Sbjct: 235 PRGSFIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTY 292
Query: 222 SSRNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGAD 268
+ Q D AG Q + S + PERPDQP+C+YYM TG CK+GA
Sbjct: 293 GTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAV 352
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 353 CKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 410
>gi|212721330|ref|NP_001132883.1| uncharacterized protein LOC100194377 [Zea mays]
gi|194695656|gb|ACF81912.1| unknown [Zea mays]
Length = 430
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 196/362 (54%), Gaps = 61/362 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ D+ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMDS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R +
Sbjct: 107 ASARMKGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPN 166
Query: 137 EKSCPYYMRTG----------------SFLPSS---------------GLQ-YAGSLPTW 164
EK C YY++TG + +PSS G Q Y G++P+W
Sbjct: 167 EKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMPSW 226
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
+ RA ++ S R Q +Y P+IV QG+V P WN+Y G + G+ Y S
Sbjct: 227 AFPRASFIPSPRWQSPSNYAPMIV--PQGLVQMPSWNSYTGQL------QSPGAQQTYGS 278
Query: 224 RNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCK 270
QG+ G Q + S + PERPD+P+C+YYM TG CK+GA CK
Sbjct: 279 SQQGEASTGNQGMLSPYRSSSFPVPQYALQRENVFPERPDEPECQYYMKTGDCKFGAVCK 338
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 330
FHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 339 FHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFDHPTVVAPMVYAY 398
Query: 331 SL 332
Sbjct: 399 GF 400
>gi|357156748|ref|XP_003577563.1| PREDICTED: zinc finger CCCH domain-containing protein 63-like
isoform 2 [Brachypodium distachyon]
Length = 447
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 223/436 (51%), Gaps = 72/436 (16%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+ + D + A+W + + ++ E G YP R GEPDC +Y RTGLC +G C+FN
Sbjct: 29 IGSHRVDGVTAAMWHMSLGESMEAG------LYPERVGEPDCSYYMRTGLCRFGMTCKFN 82
Query: 72 HPA---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HPA A A+ + E P+R GQP+C YYLKTG CK+G+TCK+HHP+++ A V N
Sbjct: 83 HPADRKMAVAAARMKGEYPQRIGQPECQYYLKTGMCKFGATCKFHHPREKAAMATRVQLN 142
Query: 128 ILGLPMRQDEKSCPYYMRTGS-------------------------FLPS------SGLQ 156
+LG P+R +EK C YY+RTG F P S
Sbjct: 143 VLGYPLRPNEKECSYYLRTGQCKFGSTCKFNHPQPSNTMVALRGSVFSPGQSATSPSQHT 202
Query: 157 YAGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS- 213
Y+GS+ W L R A +++S R G SY +IV P G+V PGW+ Y +G S
Sbjct: 203 YSGSVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYAAQLGSSSSDDQ 260
Query: 214 --IAGSNLIYSSRNQGDLGAGAQMHILSASSQN---------------LPERPDQPDCRY 256
+G+ Y+ Q + G H + +S Q+ P+RPDQP+C++
Sbjct: 261 GRSSGAAQYYTGSRQSET-QGMSDHGMISSYQHGSVPAGLYAVQREYIFPDRPDQPECQF 319
Query: 257 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 316
YM TG CK+GA CKFHHPKERI S + + PLGLP R G+ IC+ YS YGICKFGP C+
Sbjct: 320 YMKTGDCKFGAVCKFHHPKERIIPSPSCALSPLGLPLRSGEPICTFYSRYGICKFGPNCK 379
Query: 317 FDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
FDHP + YGL+ P + + H E P SS + ++D
Sbjct: 380 FDHPMG--TVMYGLATSPTGEVPTG--RHMLAPVPALSEVPPGNSSGRSRRMTHADT--- 432
Query: 377 QHQNPDMKNSTTKNSD 392
Q P + ST + +
Sbjct: 433 -QQTPSTERSTEREAS 447
>gi|356535246|ref|XP_003536159.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Glycine max]
Length = 421
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 200/347 (57%), Gaps = 52/347 (14%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
N ++++W + N G + YP RPGEPDC +Y RTGLC +G+ CRFNHP
Sbjct: 14 NPQDSLWMM----NLRTGETMDSGSYPERPGEPDCSYYMRTGLCRFGATCRFNHPPNRKL 69
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
A A+ E PER GQP+C YYLKTGTCK+G+TCK+HHPKD+ G AG V+ NILG P+R
Sbjct: 70 AIATARMIGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDQAGIAGRVALNILGYPLR 129
Query: 135 QDEKSCPYYMRTGSFLPSSGLQYAGSLPT---WSLQRAPYL------------------- 172
+E C YY+RTG + ++ P+ SL+ +P
Sbjct: 130 PNEPECTYYLRTGQCKFGNTCKFHHPQPSNMMLSLRGSPVYPTVHSPTTPGQQSYAGGTY 189
Query: 173 --SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS----PTSIAGSNLIYSSRNQ 226
S R QG SY PLI+ QG+V PGW+ Y G +G +S P + Y + Q
Sbjct: 190 IPSPRWQGPSSYAPLILP--QGVVSVPGWSAYSGQMGSISTSDSPQQAMRNGQTYGTSRQ 247
Query: 227 GDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHH 273
G+L AG+Q + + +N+ PERP QP+C++YM TG CK+GA C+FHH
Sbjct: 248 GEL-AGSQGAYSQFRSGTVPVGFYTLQRENIFPERPGQPECQFYMKTGDCKFGAVCRFHH 306
Query: 274 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 307 PQERLVPAPNCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 353
>gi|125528863|gb|EAY76977.1| hypothetical protein OsI_04935 [Oryza sativa Indica Group]
Length = 440
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 192/359 (53%), Gaps = 59/359 (16%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
E +W+ G G Q PYP R GEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 58 EGMWQ---QMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 114
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R E
Sbjct: 115 SARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSE 174
Query: 138 KSCPYYMRTG-----------------SFLPSSGL---------------QYAGSLPTWS 165
K C YY++TG + S G Y G++ +W+
Sbjct: 175 KECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPSYTGTMASWA 234
Query: 166 LQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA----GSNLI 220
R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S + G+
Sbjct: 235 FPRGSFIPSPRWQNPSNYAPMIV--PQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQT 292
Query: 221 YSSRNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGA 267
Y + Q D AG Q + S + PERPDQP+C+YYM TG CK+GA
Sbjct: 293 YGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGA 352
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 353 VCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 411
>gi|222619758|gb|EEE55890.1| hypothetical protein OsJ_04549 [Oryza sativa Japonica Group]
Length = 380
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 189/345 (54%), Gaps = 55/345 (15%)
Query: 35 GGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGAQYREELPERNG 91
G G Q PYP R GEPDC +Y RTGLC +G +CRFNHP A A+ + E PER G
Sbjct: 9 GSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGEYPERMG 68
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGS-- 148
QP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R EK C YY++TG
Sbjct: 69 QPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCK 128
Query: 149 -----------------------FLPS------SGLQYAGSLPTWSLQRAPYLSS-RLQG 178
PS +G Y G++ +W+ R ++ S R Q
Sbjct: 129 YGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQN 188
Query: 179 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYSSRNQGDLGAGAQ 234
+Y P+IV QG+V P WN+Y G + P+S + G+ Y + Q D AG Q
Sbjct: 189 PSNYAPMIVP--QGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQ 246
Query: 235 MHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 281
+ S + PERPDQP+C+YYM TG CK+GA CKFHHP+ R +
Sbjct: 247 GMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPT 306
Query: 282 AASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
+ P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 307 PDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 351
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 276 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+++ S + + P P R G+ C+ Y G+C+FG +CRF+HP
Sbjct: 3 QQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 47
>gi|223948513|gb|ACN28340.1| unknown [Zea mays]
gi|413920884|gb|AFW60816.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 441
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 221/414 (53%), Gaps = 74/414 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
+EA+W++ + + E G PYP R GEPDC +Y RTG+C +G C+FNHPA A
Sbjct: 32 QEAMWQMNLEEAMELG------PYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAV 85
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +
Sbjct: 86 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPN 145
Query: 137 EKSCPYYMRTGSFL-----------PSSGL--------------------QYAGSLPTWS 165
EK C YY+RTG PS+ + Y G++ +W
Sbjct: 146 EKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAVRGSVYSPGQSATSPGQHAYQGAVTSWP 205
Query: 166 LQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP------------ 211
L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 206 LSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSEDQQRTPGAAQY 263
Query: 212 --------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGT 262
TSI G ++SS G + G + + +NL PERPDQP+C++YM TG
Sbjct: 264 YTGSRQSGTSI-GDQGMFSSYQAGSVPVG----LYAVQRENLFPERPDQPECQFYMKTGD 318
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDHP
Sbjct: 319 CKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDHPMG 378
Query: 323 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
YG + P S + + +H E SPD S + +SD+ +
Sbjct: 379 N--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 429
>gi|212275512|ref|NP_001130819.1| uncharacterized protein LOC100191923 [Zea mays]
gi|194690198|gb|ACF79183.1| unknown [Zea mays]
gi|195614544|gb|ACG29102.1| zinc finger CCCH type domain-containing protein ZFN-like [Zea mays]
gi|223942913|gb|ACN25540.1| unknown [Zea mays]
gi|223949665|gb|ACN28916.1| unknown [Zea mays]
gi|238010126|gb|ACR36098.1| unknown [Zea mays]
gi|407232630|gb|AFT82657.1| C3H19 transcription factor, partial [Zea mays subsp. mays]
gi|414588297|tpg|DAA38868.1| TPA: putative Zinc finger CCCH type domain-containing protein ZFN
[Zea mays]
Length = 443
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 234/436 (53%), Gaps = 74/436 (16%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+ D + EA+W++ + D E G PYP R G+PDC +Y RTG+C +G C+FN
Sbjct: 25 IGAHGVDQVTEAMWQMNLGDAMELG------PYPERVGDPDCSYYMRTGMCRFGMTCKFN 78
Query: 72 HPA---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HPA A A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N
Sbjct: 79 HPADRKLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLN 138
Query: 128 ILGLPMRQDEKSCPYYMRTGSFL-----------PSSGL--------------------Q 156
LG P+R +EK C YY+RTG PS+ +
Sbjct: 139 ELGYPLRLNEKECAYYLRTGQCKFGSTCKFHHPQPSTMMVAVRGSVYSPGQSATSPGHHA 198
Query: 157 YAGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP--- 211
Y G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 199 YQGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYAAQIGSSSSDDQ 256
Query: 212 TSIAGSNLIYS-SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYY 257
G+ Y+ SR G G G + + + + ++N+ PERPDQP+C++Y
Sbjct: 257 QRTPGAAQYYTGSRQSGTPGIGDRGMFSSYQAGSVPVGLYAVQTENVFPERPDQPECQFY 316
Query: 258 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 317
M TG CK+G+ CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+F
Sbjct: 317 MKTGDCKFGSVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKF 376
Query: 318 DHPYAGYPINYGLSLPPLSILDSS--LMNHQAISATHSIETSPDASSKIPNWVQNSDAVS 375
HP G P+ YG + P S +S ++ H E SPD+ S + +SD+
Sbjct: 377 HHP-MGNPM-YGHASSPTSEAQTSRRMLAH----VPSHPEVSPDSGSGRSRRIVHSDS-- 428
Query: 376 VQHQNPDMKNSTTKNS 391
Q P ++ T + +
Sbjct: 429 --QQIPSVERITEREA 442
>gi|115488274|ref|NP_001066624.1| Os12g0405100 [Oryza sativa Japonica Group]
gi|122204753|sp|Q2QT65.1|C3H66_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 66;
Short=OsC3H66
gi|77554746|gb|ABA97542.1| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
gi|113649131|dbj|BAF29643.1| Os12g0405100 [Oryza sativa Japonica Group]
gi|215767059|dbj|BAG99287.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616953|gb|EEE53085.1| hypothetical protein OsJ_35844 [Oryza sativa Japonica Group]
Length = 454
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/383 (40%), Positives = 208/383 (54%), Gaps = 71/383 (18%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
EEA+W++ + GG +++PYP R GEPDC +Y RTGLC +G C+FNHP A
Sbjct: 44 EEAMWQMTL----GGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAV 99
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N+LG PMR +
Sbjct: 100 AAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPN 159
Query: 137 EKSCPYYMRTGSFLPSSGLQ-------------------------------YAGSLPTWS 165
EK C YY+RTG +S + Y G++ W+
Sbjct: 160 EKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAVTNWT 219
Query: 166 LQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP------------ 211
L R A +++S R G Y +IV QG+V PGWN Y +G SP
Sbjct: 220 LSRSASFIASPRWPGHSGYAQVIV--PQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQY 277
Query: 212 -------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTC 263
T G + +Y S G + G + + +N+ PERPDQP+C++YM TG C
Sbjct: 278 YGSRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFPERPDQPECQFYMKTGDC 333
Query: 264 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
K+GA CKFHHPKER+ + + LGLP RPG+ +C+ YS YGICKFGP C+FDHP
Sbjct: 334 KFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMG- 392
Query: 324 YPINYGLSLPPLSILDSSLMNHQ 346
+ YG + P D S M++Q
Sbjct: 393 -TLMYGSATSPRG--DVSSMHYQ 412
>gi|414879020|tpg|DAA56151.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 430
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 197/362 (54%), Gaps = 61/362 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ D+ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMDS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R +
Sbjct: 107 ASARMKGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPN 166
Query: 137 EKSCPYYMRTG----------------SFLPSS---------------GLQ-YAGSLPTW 164
EK C YY++TG + +PSS G Q Y G++P+W
Sbjct: 167 EKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMPSW 226
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
+ RA ++ S R Q +Y P+IV QG+V WN+Y G + G+ Y S
Sbjct: 227 AFPRASFIPSPRWQSPSNYAPMIV--PQGLVQMQSWNSYTGQL------QSPGAQQTYGS 278
Query: 224 RNQGDLGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCK 270
QG+ G Q + + +N+ PERPD+P+C+YYM TG CK+GA CK
Sbjct: 279 SQQGEASTGNQGMLSPYRPSSFPVPQYALQRENVFPERPDEPECQYYMKTGDCKFGAVCK 338
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 330
FHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 339 FHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFDHPTVVAPMVYAY 398
Query: 331 SL 332
Sbjct: 399 GF 400
>gi|357156745|ref|XP_003577562.1| PREDICTED: zinc finger CCCH domain-containing protein 63-like
isoform 1 [Brachypodium distachyon]
Length = 445
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 220/426 (51%), Gaps = 72/426 (16%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
EA+W + + ++ E G YP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 37 EAMWHMSLGESMEAG------LYPERVGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 90
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E P+R GQP+C YYLKTG CK+G+TCK+HHP+++ A V N+LG P+R +E
Sbjct: 91 AARMKGEYPQRIGQPECQYYLKTGMCKFGATCKFHHPREKAAMATRVQLNVLGYPLRPNE 150
Query: 138 KSCPYYMRTGS-------------------------FLPS------SGLQYAGSLPTWSL 166
K C YY+RTG F P S Y+GS+ W L
Sbjct: 151 KECSYYLRTGQCKFGSTCKFNHPQPSNTMVALRGSVFSPGQSATSPSQHTYSGSVTNWPL 210
Query: 167 QR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS---IAGSNLIY 221
R A +++S R G SY +IV P G+V PGW+ Y +G S +G+ Y
Sbjct: 211 SRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYAAQLGSSSSDDQGRSSGAAQYY 268
Query: 222 SSRNQGDLGAGAQMHILSASSQN---------------LPERPDQPDCRYYMNTGTCKYG 266
+ Q + G H + +S Q+ P+RPDQP+C++YM TG CK+G
Sbjct: 269 TGSRQSET-QGMSDHGMISSYQHGSVPAGLYAVQREYIFPDRPDQPECQFYMKTGDCKFG 327
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
A CKFHHPKERI S + + PLGLP R G+ IC+ YS YGICKFGP C+FDHP +
Sbjct: 328 AVCKFHHPKERIIPSPSCALSPLGLPLRSGEPICTFYSRYGICKFGPNCKFDHPMG--TV 385
Query: 327 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNS 386
YGL+ P + + H E P SS + ++D Q P + S
Sbjct: 386 MYGLATSPTGEVPTG--RHMLAPVPALSEVPPGNSSGRSRRMTHADT----QQTPSTERS 439
Query: 387 TTKNSD 392
T + +
Sbjct: 440 TEREAS 445
>gi|255642812|gb|ACU21592.1| Zinc finger protein [Triticum aestivum]
Length = 435
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 207/391 (52%), Gaps = 63/391 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ + G Q+ PYP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMSS---GATMQSGPYPVRPGEPDCTYYLRTGLCRFGMSCRFNHPQDRNTAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +
Sbjct: 107 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRPN 166
Query: 137 EKSCPYYMRTG-----------------SFLPSSGL---------------QYAGSLPTW 164
E+ C YY++TG + S G Y G++ +W
Sbjct: 167 ERECAYYLKTGQCKYGNTCKFNHPEIFSAVASSRGSPIYPPVHNSGSTGPHSYTGTMASW 226
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTSIA---GSNL 219
+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+ SP S G+
Sbjct: 227 TYPRGSFIPSPRWQSPSNYTPMIV--PQGLVQVPNWNSYPGQMVPVSSPESRLQSPGAQQ 284
Query: 220 IYSSRNQGDLGAGAQ-MHILSASSQN------------LPERPDQPDCRYYMNTGTCKYG 266
Y + QG+ AG Q M SS PERPDQP+C YY+ TG CK+G
Sbjct: 285 YYGTSRQGEASAGNQGMQSPYRSSSFPAPQYALQRENVFPERPDQPECIYYIKTGDCKFG 344
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG--- 323
A CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP A
Sbjct: 345 AVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMG 404
Query: 324 -YPINYGLSLPPLSILDSSLMNHQAISATHS 353
Y Y S P + + L+ + SA S
Sbjct: 405 VYAYGYSASASPNAPMARRLLESPSGSAYAS 435
>gi|194695912|gb|ACF82040.1| unknown [Zea mays]
gi|407232612|gb|AFT82648.1| C3H49 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413951531|gb|AFW84180.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
Length = 427
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 199/364 (54%), Gaps = 64/364 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ ++ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 46 EEGMWQQMAMNS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 102
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+ +
Sbjct: 103 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPN 162
Query: 137 EKSCPYYMRTG----------------SFLPSS---------------GLQ-YAGSLPTW 164
EK C YY++TG + +PSS G Q Y G++ +W
Sbjct: 163 EKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMSSW 222
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
+ RA ++ S R Q +Y P++V G+V P WN+Y G + SP G+ Y S
Sbjct: 223 TFPRASFIPSPRWQSPSNYAPMVV--PHGLVQVPSWNSYPGQL--QSP----GAQQTYGS 274
Query: 224 RNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCK 270
QG+ AG Q + S + PERPD+P+C+YYM TG CK+GA CK
Sbjct: 275 SQQGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCKFGAVCK 334
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN--- 327
FHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 335 FHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAAPMGVYA 394
Query: 328 YGLS 331
YG S
Sbjct: 395 YGFS 398
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 309 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 368
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 369 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 399
>gi|226504596|ref|NP_001150019.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
gi|195636098|gb|ACG37517.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
Length = 427
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 199/364 (54%), Gaps = 64/364 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ ++ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 46 EEGMWQQMAMNS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 102
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+ +
Sbjct: 103 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPN 162
Query: 137 EKSCPYYMRTG----------------SFLPSS---------------GLQ-YAGSLPTW 164
EK C YY++TG + +PSS G Q Y G++ +W
Sbjct: 163 EKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMSSW 222
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
+ RA ++ S R Q +Y P++V G+V P WN+Y G + SP G+ Y S
Sbjct: 223 TFPRASFIPSPRWQSPSNYAPMVV--PHGLVQVPSWNSYPGQL--QSP----GAQQTYGS 274
Query: 224 RNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCK 270
QG+ AG Q + S + PERPD+P+C+YYM TG CK+GA CK
Sbjct: 275 SQQGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCKFGAVCK 334
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN--- 327
FHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 335 FHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAAPMGVYA 394
Query: 328 YGLS 331
YG S
Sbjct: 395 YGFS 398
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 309 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 368
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 369 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 399
>gi|413920885|gb|AFW60817.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 407
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 218/411 (53%), Gaps = 74/411 (18%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGA 80
+W++ + + E G PYP R GEPDC +Y RTG+C +G C+FNHPA A A
Sbjct: 1 MWQMNLEEAMELG------PYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAA 54
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +EK
Sbjct: 55 RMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPNEKE 114
Query: 140 CPYYMRTGSFL-----------PSSGL--------------------QYAGSLPTWSLQR 168
C YY+RTG PS+ + Y G++ +W L R
Sbjct: 115 CAYYLRTGQCKFGSTCKFHHSQPSTMMVAVRGSVYSPGQSATSPGQHAYQGAVTSWPLSR 174
Query: 169 -APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP--------------- 211
A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 175 SASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSEDQQRTPGAAQYYTG 232
Query: 212 -----TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKY 265
TSI G ++SS G + G + + +NL PERPDQP+C++YM TG CK+
Sbjct: 233 SRQSGTSI-GDQGMFSSYQAGSVPVG----LYAVQRENLFPERPDQPECQFYMKTGDCKF 287
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325
GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDHP
Sbjct: 288 GAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDHPMGN-- 345
Query: 326 INYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 376
YG + P S + + +H E SPD S + +SD+ +
Sbjct: 346 AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 395
>gi|297828742|ref|XP_002882253.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata]
gi|297328093|gb|EFH58512.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 196/342 (57%), Gaps = 55/342 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ + + YP RPGEPDC +Y RTGLC +GS CRFNHP
Sbjct: 18 QDAMWQMNLSSDE----IMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVI 73
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ R E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +
Sbjct: 74 ATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSN 133
Query: 137 EKSCPYYMRTG-------------------SFLPSSGLQYAGSLPTWSLQRAPYLSS-RL 176
E C Y++RTG +P+SG Q S P WS RA +++S R
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQ---SYP-WS--RASFIASPRW 187
Query: 177 QGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH 236
Q SY LI+ QG+VP GWN Y G +G +SP+ G++ Y + Q +
Sbjct: 188 QDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQS 244
Query: 237 ILSASSQN------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 278
S S N PERP QP+C++YM TG CK+G CKFHHP++R
Sbjct: 245 QGSFSGFNPGSSVPIGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ 304
Query: 279 AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
A + +GLP RPG+ +C Y+ YGICKFGP+C+FDHP
Sbjct: 305 APPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346
>gi|18396338|ref|NP_566183.1| zinc finger CCCH domain-containing protein 33 [Arabidopsis
thaliana]
gi|62901378|sp|Q8GXX7.1|C3H33_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 33;
Short=AtC3H33; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN1
gi|26451016|dbj|BAC42614.1| putative zinc finger protein 1 zfn1 [Arabidopsis thaliana]
gi|109134113|gb|ABG25055.1| At3g02830 [Arabidopsis thaliana]
gi|332640343|gb|AEE73864.1| zinc finger CCCH domain-containing protein 33 [Arabidopsis
thaliana]
Length = 397
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 213/385 (55%), Gaps = 56/385 (14%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ + YP RPGEPDC +Y RTGLC +GS CRFNHP
Sbjct: 18 QDAMWQMNLSSDE----TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVI 73
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ R E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +
Sbjct: 74 ATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSN 133
Query: 137 EKSCPYYMRTG-------------------SFLPSSGLQYAGSLPTWSLQRAPYLSS-RL 176
E C Y++RTG +P+SG Q S P WS RA +++S R
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQ---SYP-WS--RASFIASPRW 187
Query: 177 QGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH 236
Q SY LI+ QG+VP GWN Y G +G +SP+ G++ Y + Q +
Sbjct: 188 QDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQS 244
Query: 237 ILSASSQN------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 278
S S N PERP QP+C++YM TG CK+G CKFHHP++R
Sbjct: 245 QGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ 304
Query: 279 AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
A + +GLP RPG+ +C Y+ YGICKFGP+C+FDHP + + S ++
Sbjct: 305 APPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETD-EVV 363
Query: 339 DSSLMNHQAISATHSIETSPDASSK 363
++S + +S + + + + +S K
Sbjct: 364 ETSTGKSRRLSVSETRQAATTSSGK 388
>gi|224029745|gb|ACN33948.1| unknown [Zea mays]
gi|413951533|gb|AFW84182.1| hypothetical protein ZEAMMB73_594165 [Zea mays]
Length = 377
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 192/349 (55%), Gaps = 61/349 (17%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGAQYREELPERNGQ 92
G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A A+ + E PER GQ
Sbjct: 8 GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARMKGEYPERVGQ 67
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG---- 147
P+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+ +EK C YY++TG
Sbjct: 68 PECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPNEKECAYYLKTGQCKY 127
Query: 148 ------------SFLPSS---------------GLQ-YAGSLPTWSLQRAPYL-SSRLQG 178
+ +PSS G Q Y G++ +W+ RA ++ S R Q
Sbjct: 128 ANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMSSWTFPRASFIPSPRWQS 187
Query: 179 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHIL 238
+Y P++V G+V P WN+Y G + SP G+ Y S QG+ AG Q +
Sbjct: 188 PSNYAPMVV--PHGLVQVPSWNSYPGQL--QSP----GAQQTYGSSQQGEASAGNQGMLS 239
Query: 239 SASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
S + PERPD+P+C+YYM TG CK+GA CKFHHP+ R
Sbjct: 240 PYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCV 299
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN---YGLS 331
+ P+GLP RPG+ +C YS YGICKFG C+FDHP P+ YG S
Sbjct: 300 LSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAAPMGVYAYGFS 348
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 259 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 318
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 319 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 349
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 277 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++A ++ + + P P RPG+ C+ Y G+C+FG +CRF+HP
Sbjct: 2 KMAMNSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHP 45
>gi|357126500|ref|XP_003564925.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform 1 [Brachypodium distachyon]
Length = 442
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 193/356 (54%), Gaps = 59/356 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
+E +W+ G Q PYP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 57 DEGMWQ---EMTMSSGAPMQPGPYPERPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAI 113
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +
Sbjct: 114 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRLN 173
Query: 137 EKSCPYYMRTGS-------------------------FLPSSGL-------QYAGSLPTW 164
EK C YY++TG PS YAG++ W
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFNHPELFNAVASSRGSPIYPSLHTSASAGPHSYAGTISNW 233
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA----GSNL 219
+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S + G+
Sbjct: 234 TYPRGSFIPSPRWQSPSNYAPMIV--QQGLVQVPSWNSYPGQMLPVSSSESRLQSPGAQQ 291
Query: 220 IYSSRNQGDLGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYG 266
Y + QG+ +G Q + + +N+ PERPDQP+C YY+ TG CK+G
Sbjct: 292 NYGTYRQGEASSGNQGMLSPYRPSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFG 351
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
A CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP A
Sbjct: 352 AVCKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGINCKFDHPMA 407
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
P RPGE C FY R G+C +G NC+F+HP + G
Sbjct: 377 PLRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 412
>gi|218186710|gb|EEC69137.1| hypothetical protein OsI_38063 [Oryza sativa Indica Group]
Length = 395
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 194/350 (55%), Gaps = 64/350 (18%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
EEA+W++ + GG +++PYP R GEPDC +Y RTGLC +G C+FNHP A
Sbjct: 44 EEAMWQMTL----GGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAV 99
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N+LG PMR +
Sbjct: 100 AAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPN 159
Query: 137 EKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA 196
EK C YY+RTG ++A + Y +IV QG+V
Sbjct: 160 EKECAYYLRTGQ------CKFASTC--------------------YAQVIVP--QGLVQV 191
Query: 197 PGWNTYMGNIGPLSP-------------------TSIAGSNLIYSSRNQGDLGAGAQMHI 237
PGWN Y +G SP T G + +Y S G + G +
Sbjct: 192 PGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVG----V 247
Query: 238 LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 296
+ +N+ PERPDQP+C++YM TG CK+GA CKFHHPKER+ + + LGLP RPG
Sbjct: 248 YTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPG 307
Query: 297 QAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQ 346
+ +C+ YS YGICKFGP C+FDHP + YG + P D S M++Q
Sbjct: 308 EPVCTFYSRYGICKFGPNCKFDHPMG--TLMYGSATSPTG--DVSSMHYQ 353
>gi|359476781|ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Vitis vinifera]
Length = 393
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 193/327 (59%), Gaps = 33/327 (10%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ ++ PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 26 QDAMWQMNLRSSE----TMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAI 81
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG VS NILG P+R D
Sbjct: 82 ATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPD 141
Query: 137 EKSCPYYMRTGSFLPSSGLQYAGSLPT---WSLQRAPYLSS----RLQGTQSYMPLIVS- 188
E C YY+RTG S ++ P+ SL+ +P S G QSY I +
Sbjct: 142 EIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVYPSVPSPTTPGQQSYAGGITNW 201
Query: 189 --PSQGIVPAPGWNTYMGNIGPLSPTSIA-GSNLIYSSRNQGDLGAGAQMHILSASSQNL 245
+P+P W +P+S A GS +S G + G + +N+
Sbjct: 202 PLSRASFIPSPRWQ---------APSSYATGSQGTFSPYRSGSVPIG----FYALQRENV 248
Query: 246 -PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PERP QP+C++YM TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS
Sbjct: 249 FPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYS 308
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLS 331
YGICKFGP+C+FDHP + N S
Sbjct: 309 RYGICKFGPSCKFDHPMGIFAYNLSAS 335
>gi|326503048|dbj|BAJ99149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 204/376 (54%), Gaps = 60/376 (15%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGAQYREELPERNGQ 92
G Q+ PYP RPGEPDC +Y RTGLC +G +CRFNHP A A+ + E PER GQ
Sbjct: 10 GVTMQSGPYPVRPGEPDCTYYLRTGLCRFGMSCRFNHPQDRNTAIASARMKGEYPERVGQ 69
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSF-- 149
P+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +E+ C YY++TG
Sbjct: 70 PECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNALGYPLRPNERECAYYLKTGQCKY 129
Query: 150 --------------------------LPSSGL----QYAGSLPTWSLQRAPYL-SSRLQG 178
+ +SG Y G++ +W+ R ++ S R Q
Sbjct: 130 GNTCKFNHPEIFNAVASSRGSPIYPPVHTSGSTGPHSYTGTMASWTYPRGSFIPSPRWQS 189
Query: 179 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTSIA---GSNLIYSSRNQGDLGAGAQ 234
+Y P+IV QG+V P WN+Y G + P+ SP S G+ Y + QG+ AG Q
Sbjct: 190 PSNYTPMIV--PQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQ 247
Query: 235 ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 281
+ + +N+ PERPDQP+C YY+ TG CK+GA CKFHHP+ R
Sbjct: 248 GMQSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPP 307
Query: 282 AASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG----YPINYGLSLPPLSI 337
+ P+GLP RPG+ +C YS YGICKFG C+FDHP A Y Y S P +
Sbjct: 308 PDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAP 367
Query: 338 LDSSLMNHQAISATHS 353
+ L+ + SA S
Sbjct: 368 MARRLLESPSGSAYAS 383
>gi|357154003|ref|XP_003576637.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
[Brachypodium distachyon]
Length = 442
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 214/412 (51%), Gaps = 64/412 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
EE +W++ + GG + PYP R GEPDC +Y RTGLC +G C+FNHP A
Sbjct: 28 TEETMWQMSLGG---GGESMEPGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLA 84
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQ 135
A+ E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A N+LG P+R
Sbjct: 85 VAAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRAQLNVLGYPLRP 144
Query: 136 DEKSCPYYMRTGSFL-----------PSSGL--------------------QYAGSLPTW 164
+EK C YY+RTG PSS + Y G++ W
Sbjct: 145 NEKECAYYLRTGQCKFASTCKFHHPQPSSTMVAVRGSMYSPGQSATSPGQNTYPGAVTNW 204
Query: 165 SLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS---IAGSNL 219
++ R A +++S R G Y +IV Q IV PGWN Y IG SP G+
Sbjct: 205 NMSRSASFIASPRWPGHSGYAQVIV--PQSIVQVPGWNPYAAQIGSSSPDDQQRTPGTTH 262
Query: 220 IYSSRNQ------GDLG-------AGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKY 265
YS Q GD G + + + N+ PERPDQP+C++YM TG CK+
Sbjct: 263 YYSGSRQSETTGMGDHGMFPSYQAGSVPLGVYAVQGDNVFPERPDQPECQFYMKTGDCKF 322
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325
GA CKF+HPKER+ + + PLGLP RPG+ +C+ YS YGICKFGP C+FDHP
Sbjct: 323 GAVCKFNHPKERMIPAPNCALSPLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMG--T 380
Query: 326 INYGLSLPPLSILDSSLMNHQ-AISATHSIETSPDASSKIPNWVQNSDAVSV 376
+ YG P S D +++Q A S HS S + V SD+ +
Sbjct: 381 VMYGSVTSPTS--DVPTLHYQLAPSPGHSERLLDGGGSGRSHRVPQSDSQHI 430
>gi|449449625|ref|XP_004142565.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 367
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 209/403 (51%), Gaps = 74/403 (18%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPE 88
N G + + YP RPGEPDC +Y RTGLC +G+ CRFNHP A A+ + E PE
Sbjct: 2 NLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMKGEFPE 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
R GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG V+ NILG P+R E C YY+RTG
Sbjct: 62 RIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTG 121
Query: 148 SFL------------------------------PSSGLQ-YAGSLPTWSLQRAPYL-SSR 175
P+ G Q Y G WS RA ++ S R
Sbjct: 122 QCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWS--RASFIPSPR 179
Query: 176 LQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
QG SY LI+ QG++ PGWN + +G S++ S +R
Sbjct: 180 WQGPSSYASLIL--PQGVLSVPGWNAFNDQLG-----SVSSSESPQQTRE---------- 222
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PERP QP+C++YM TG CK+GA C+FHHP+ER+ + + P+GLP RP
Sbjct: 223 -------NVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRP 275
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIE 355
G+ +C YS YGICKFGP+C+FDHP + N LS S+ Q + T S
Sbjct: 276 GEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN-------LSAASSANAPVQHLFGTSSGT 328
Query: 356 TSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKVD 398
T+ + SS+ +A S + + + S SDD + +
Sbjct: 329 TALNLSSE-----GLVEAGSAKPRRLSISESREMPSDDENDAE 366
>gi|307135987|gb|ADN33845.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 367
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 197/368 (53%), Gaps = 69/368 (18%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPE 88
N G + + YP RPGEPDC +Y RTGLC +G+ CRFNHP A A+ + E PE
Sbjct: 2 NLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMKGEFPE 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
R GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG V+ NILG P+R E C YY+RTG
Sbjct: 62 RIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTG 121
Query: 148 SFL------------------------------PSSGLQ-YAGSLPTWSLQRAPYL-SSR 175
P+ G Q Y G WS RA ++ S R
Sbjct: 122 QCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWS--RASFIPSPR 179
Query: 176 LQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
QG SY LI+ QG++ PGWN + +G S++ S +R
Sbjct: 180 WQGPSSYASLIL--PQGVLSVPGWNAFNDQLG-----SVSSSESPQQTRE---------- 222
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PERP QP+C++YM TG CK+GA C+FHHP+ER+ + + P+GLP RP
Sbjct: 223 -------NVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRP 275
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIE 355
G+ +C YS YGICKFGP+C+FDHP + N LS S+ Q + T S
Sbjct: 276 GEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN-------LSAASSANAPVQHLFGTSSGT 328
Query: 356 TSPDASSK 363
T+ + SS+
Sbjct: 329 TALNLSSE 336
>gi|6728979|gb|AAF26977.1|AC018363_22 zinc finger protein 1 (zfn1) [Arabidopsis thaliana]
Length = 377
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 210/382 (54%), Gaps = 56/382 (14%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W++ + ++ + YP RPGEPDC +Y RTGLC +GS CRFNHP A
Sbjct: 1 MWQMNLSSDE----TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATA 56
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ R E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +E
Sbjct: 57 RMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVD 116
Query: 140 CPYYMRTG-------------------SFLPSSGLQYAGSLPTWSLQRAPYLSS-RLQGT 179
C Y++RTG +P+SG Q S P WS RA +++S R Q
Sbjct: 117 CAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQ---SYP-WS--RASFIASPRWQDP 170
Query: 180 QSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILS 239
SY LI+ QG+VP GWN Y G +G +SP+ G++ Y + Q + S
Sbjct: 171 SSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQSQGS 227
Query: 240 ASSQN------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 281
S N PERP QP+C++YM TG CK+G CKFHHP++R A
Sbjct: 228 FSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPP 287
Query: 282 AASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSS 341
+ +GLP RPG+ +C Y+ YGICKFGP+C+FDHP + + S ++++S
Sbjct: 288 PDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETD-EVVETS 346
Query: 342 LMNHQAISATHSIETSPDASSK 363
+ +S + + + + +S K
Sbjct: 347 TGKSRRLSVSETRQAATTSSGK 368
>gi|4928917|gb|AAD33769.1|AF138743_1 zinc finger protein 1 [Arabidopsis thaliana]
Length = 424
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 211/385 (54%), Gaps = 56/385 (14%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ + YP RPGEPDC +Y RTGLC +GS CR NHP
Sbjct: 18 QDAMWQMNLSSDE----TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRVNHPRDRELVI 73
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ R E PER G P+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +
Sbjct: 74 ATARMRGEYPERIGHPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSN 133
Query: 137 EKSCPYYMRTG-------------------SFLPSSGLQYAGSLPTWSLQRAPYLSS-RL 176
E C Y++RTG +P+SG Q S P WS RA +++S R
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQ---SYP-WS--RASFIASPRW 187
Query: 177 QGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH 236
Q SY LI+ QG+VP GWN Y G +G +SP+ G++ Y + Q +
Sbjct: 188 QDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQS 244
Query: 237 ILSASSQN------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 278
S S N PERP QP+C++YM TG CK+G CKFHHP++R
Sbjct: 245 QGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ 304
Query: 279 AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
A + +GLP RPG+ +C Y+ YGICKFGP+C+FDHP + + S ++
Sbjct: 305 APPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETD-EVV 363
Query: 339 DSSLMNHQAISATHSIETSPDASSK 363
++S + +S + + + + +S K
Sbjct: 364 ETSTGKSRRLSVSETRQAATTSSGK 388
>gi|356568483|ref|XP_003552440.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 362
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 193/326 (59%), Gaps = 31/326 (9%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A A
Sbjct: 1 MWQINLRSSE----TMESEPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAA 56
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ NILG P+R +E
Sbjct: 57 RMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVALNILGYPLRPNEPE 116
Query: 140 CPYYMRTGSFLPSSGLQYAGSLP---TWSLQRAPYL----SSRLQGTQSYMPLIVS-PSQ 191
C YY+RTG + ++ P S++ +P S G QSY I + S
Sbjct: 117 CGYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGHQSYATGITNWSSS 176
Query: 192 GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPD 250
+P+P W GP S S GS YS G + G + +N+ PERPD
Sbjct: 177 SYIPSPRWQ------GPSSYAS--GSQGAYSQFRSGSVPVG----FYALQRENIFPERPD 224
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
QP+C++YM TG CK+GA C+FHHP ER+ + + P+GLP RPG+ +C YS YGICK
Sbjct: 225 QPECQFYMKTGDCKFGAVCRFHHPHERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICK 284
Query: 311 FGPTCRFDHPYAGYPINYGLSLPPLS 336
FGP+C+FDHP + Y +S PL+
Sbjct: 285 FGPSCKFDHPMGVF--TYNMSASPLA 308
>gi|357126502|ref|XP_003564926.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform 2 [Brachypodium distachyon]
Length = 432
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 188/352 (53%), Gaps = 61/352 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
+E +W+ G Q PYP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 57 DEGMWQ---EMTMSSGAPMQPGPYPERPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAI 113
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +
Sbjct: 114 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRLN 173
Query: 137 EKSCPYYMRTGS-------------------------FLPSSGL-------QYAGSLPTW 164
EK C YY++TG PS YAG++ W
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFNHPELFNAVASSRGSPIYPSLHTSASAGPHSYAGTISNW 233
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 223
+ R ++ S R Q +Y P+IV QG+V P WN+Y + G+ Y +
Sbjct: 234 TYPRGSFIPSPRWQSPSNYAPMIV--QQGLVQVPSWNSYPSRL------QSPGAQQNYGT 285
Query: 224 RNQGDLGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCK 270
QG+ +G Q + + +N+ PERPDQP+C YY+ TG CK+GA CK
Sbjct: 286 YRQGEASSGNQGMLSPYRPSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCK 345
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
FHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP A
Sbjct: 346 FHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGINCKFDHPMA 397
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
P RPGE C FY R G+C +G NC+F+HP + G
Sbjct: 367 PLRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 402
>gi|413951532|gb|AFW84181.1| hypothetical protein ZEAMMB73_594165 [Zea mays]
Length = 375
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 183/332 (55%), Gaps = 52/332 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ ++ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 46 EEGMWQQMAMNS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 102
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+
Sbjct: 103 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPL--- 159
Query: 137 EKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVP 195
LPS Y G++ +W+ RA ++ S R Q +Y P++V G+V
Sbjct: 160 -------------LPS----YTGTMSSWTFPRASFIPSPRWQSPSNYAPMVVP--HGLVQ 200
Query: 196 APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLP--------- 246
P WN+Y G + G+ Y S QG+ AG Q + S + P
Sbjct: 201 VPSWNSYPGQL------QSPGAQQTYGSSQQGEASAGNQGMLSPYRSSSFPVPQYALQRD 254
Query: 247 ----ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
ERPD+P+C+YYM TG CK+GA CKFHHP+ R + P+GLP RPG+ +C
Sbjct: 255 NVFPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKF 314
Query: 303 YSMYGICKFGPTCRFDHPYAGYPIN---YGLS 331
YS YGICKFG C+FDHP P+ YG S
Sbjct: 315 YSRYGICKFGANCKFDHPTMAAPMGVYAYGFS 346
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 257 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 316
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 317 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 347
>gi|326503628|dbj|BAJ86320.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 200/371 (53%), Gaps = 62/371 (16%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
EA W++ + GG + PYP R GE DC +Y RTG C +G C+FNHPA A
Sbjct: 32 EATWQMTLGC---GGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVA 88
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A N+LG P+R +E
Sbjct: 89 AARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNE 148
Query: 138 KSCPYYMRTGSFL-----------PSSGL--------------------QYAGSLPTWSL 166
K C YY+RTG PSS + Y+G++ WSL
Sbjct: 149 KECVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQSTTSPGQNTYSGAVTNWSL 208
Query: 167 QR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS---PTSIAGSNLIY 221
R A +++S R G Y +IV QG+V PGWN Y +G S G+ Y
Sbjct: 209 SRSASFIASPRWPGPSGYEQVIV--PQGLVQVPGWNPYAAQMGSSSLDGQQRTPGTAHYY 266
Query: 222 SSRNQGDLGAG------------AQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGAD 268
+ + G G A + + + +N PERP+QP+C++YM TG CK+GA
Sbjct: 267 GTHQRETTGMGEHGMFTSHKAGSAPLGVYAVQGENTFPERPEQPECQFYMKTGDCKFGAV 326
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA----GY 324
CKF+HPK+R+ + + PLGLP RPG+ IC+ YS YGICKFGP C+FDHP G
Sbjct: 327 CKFNHPKKRMVPAPNCALSPLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTILYGS 386
Query: 325 PINYGLSLPPL 335
P + +PPL
Sbjct: 387 PTSPTGDVPPL 397
>gi|225436765|ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
[Vitis vinifera]
gi|296086618|emb|CBI32253.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 215/428 (50%), Gaps = 71/428 (16%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
++ +EE++WRL G++ YP RPG DC++Y +TG CG+GS CR+NHP
Sbjct: 25 RAVSGLEESMWRL---------GLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYNHPR 75
Query: 75 YAAQGAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNI 128
+ + R E PER G+P C +YLKTGTCK+G++C++HHP RNG G VS NI
Sbjct: 76 DRSSVSTLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHP--RNGGGSMSHVSLNI 133
Query: 129 LGLPMRQDEKSCPYYMRTG-----------------SFLPSSG---------------LQ 156
G P+R EK C YY++TG + LP+S Q
Sbjct: 134 YGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPTFYPTVQSPSVPTPTQ 193
Query: 157 YAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-----S 210
Y G+ +W + R P L S +QG Y P++ P G+VP PGW+ Y + P+
Sbjct: 194 YGGTSTSWRVPRPPVLPGSYVQGP--YGPVLFPP--GVVPIPGWSPYSTPVSPVLSPGAQ 249
Query: 211 PTSIAGSNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGT 262
PT AGS + AG + S++ Q PERP Q +C+YY+ TG
Sbjct: 250 PTVGAGSVYGVTQLPSTHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGD 309
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CK+G+ C++HHP+E + + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 310 CKFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLG 369
Query: 323 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPD 382
N S S+ D + + S+ ++ S +S P+++ S S + P
Sbjct: 370 ----NMRYSPSASSLTDMPVAPYPVGSSLATLAPSFSSSDLRPDFISGSKKDSHSTRMPS 425
Query: 383 MKNSTTKN 390
N+T+ +
Sbjct: 426 SGNTTSSS 433
>gi|255551693|ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 481
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 186/357 (52%), Gaps = 68/357 (19%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AY 75
+EE W+L + + + G YP RP E DC++Y RTG CGYGS CRFNHP A
Sbjct: 28 LEEGDWQLGLGEVEPG--------YPERPEEADCIYYLRTGFCGYGSRCRFNHPRDRGAV 79
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
E PER GQP C YY++TGTCK+G++CKYHHPK G A PVS N G P+R
Sbjct: 80 LGAARAGAAEFPERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSANPVSLNYYGYPLR 139
Query: 135 QDEKSCPYYMRTGSF-------------------LPSSGLQYAG---------------- 159
EK C YY++TG S LQ A
Sbjct: 140 PGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPALQVAPVPAPVPASALYPNVQS 199
Query: 160 -SLPT-----WSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SP 211
S+P+ + R P L S +QG Y P++VSP G+VP P W+ Y G I P+ SP
Sbjct: 200 PSVPSTQQYGLVVARPPLLPGSYVQG--PYGPMLVSP--GVVPYPSWSPYPGPISPVASP 255
Query: 212 TSIAGSNLIYSSRNQGDLGA----GAQMHILSASSQ----NLPERPDQPDCRYYMNTGTC 263
++ G Q A G + S+S+Q + PERP QP+C+YYM TG C
Sbjct: 256 STQLGVGSGVYGITQLSPSAPAYTGGYQAMPSSSNQKEQPSFPERPGQPECQYYMKTGDC 315
Query: 264 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
K+G+ CK+HHP E IA + P+GLP RPG C++Y+ G CKFGP C+FDHP
Sbjct: 316 KFGSSCKYHHPPELIAPKTNVVLSPMGLPLRPGAPHCTHYTQRGQCKFGPACKFDHP 372
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 297
L PERP++ DC YY+ TG C YG+ C+F+HP++R A A+ G P R GQ
Sbjct: 37 LGEVEPGYPERPEEADCIYYLRTGFCGYGSRCRFNHPRDRGAVLGAARAGAAEFPERVGQ 96
Query: 298 AICSNYSMYGICKFGPTCRFDHPYAG 323
+C Y G CKFG +C++ HP G
Sbjct: 97 PVCQYYMRTGTCKFGASCKYHHPKQG 122
>gi|302824291|ref|XP_002993790.1| hypothetical protein SELMODRAFT_45658 [Selaginella moellendorffii]
gi|300138386|gb|EFJ05156.1| hypothetical protein SELMODRAFT_45658 [Selaginella moellendorffii]
Length = 295
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 165/286 (57%), Gaps = 14/286 (4%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGY 97
PYP RPGE DC++Y RTGLC +G +C+FNHP AA A+ + E PER GQP+C Y
Sbjct: 3 GGPYPERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAIARGKGEYPERPGQPECQY 62
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQ 156
+LKTGTCK+GSTCKY HP+D+ G V NI+GLP R EK C YYMRTGS +
Sbjct: 63 FLKTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGEKECAYYMRTGS------CK 116
Query: 157 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 216
Y + Q P + + + SQ P T + P SPT+
Sbjct: 117 YGVTCKFHHPQ--PAVVPSIYAAAAAAAAAAGASQPGTPNAATGTPQ-HFQPGSPTTADY 173
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 276
S + S G L AG + H PERP +C+YY+ TG CKYGA C+FHHP++
Sbjct: 174 SPFVPGSPTMG-LPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRD 232
Query: 277 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
RI+ SA + + P+GLP R G CS Y +GICKFGPTC+FDHP A
Sbjct: 233 RISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLA 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELP 87
+GGG A +P RPG +C +Y +TG C YG++CRF+HP + +A LP
Sbjct: 191 EHKGGGGGDA--FPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISASAPTMLSPMGLP 248
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R G C YY++ G CK+G TCK+ HP
Sbjct: 249 LRTGVQPCSYYIRFGICKFGPTCKFDHP 276
>gi|302823236|ref|XP_002993272.1| hypothetical protein SELMODRAFT_45667 [Selaginella moellendorffii]
gi|300138942|gb|EFJ05693.1| hypothetical protein SELMODRAFT_45667 [Selaginella moellendorffii]
Length = 294
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 166/286 (58%), Gaps = 15/286 (5%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGY 97
PYP RPGE DC++Y RTGLC +G +C+FNHP AA A+ + E PER GQP+C Y
Sbjct: 3 GGPYPERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAIARGKGEYPERPGQPECQY 62
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQ 156
+LKTGTCK+GSTCKY HP+D+ G V NI+GLP R EK C YYMRTGS G+
Sbjct: 63 FLKTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGEKECAYYMRTGSC--KYGVT 120
Query: 157 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 216
P ++ + Y ++ SQ P T + P SPT+
Sbjct: 121 CKFHHPQPAVVPSIYAAAAAAAAAGA-------SQPGTPNAATGTPQ-HFQPGSPTTADY 172
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 276
S + S G L AG + H PERP +C+YY+ TG CKYGA C+FHHP++
Sbjct: 173 SPFVPGSPTMG-LPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRD 231
Query: 277 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
RI+ SA + + P+GLP R G CS Y +GICKFGPTC+FDHP A
Sbjct: 232 RISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLA 277
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELP 87
+GGG A +P RPG +C +Y +TG C YG++CRF+HP + +A LP
Sbjct: 190 EHKGGGGGDA--FPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISASAPTMLSPMGLP 247
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R G C YY++ G CK+G TCK+ HP
Sbjct: 248 LRTGVQPCSYYIRFGICKFGPTCKFDHP 275
>gi|30690809|ref|NP_182306.2| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|145331439|ref|NP_001078078.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|62901446|sp|Q84W91.2|C3H32_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 32;
Short=AtC3H32; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 1
gi|134031914|gb|ABO45694.1| At2g47850 [Arabidopsis thaliana]
gi|330255803|gb|AEC10897.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|330255805|gb|AEC10899.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
Length = 468
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 184/349 (52%), Gaps = 61/349 (17%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
++E++WRL + + YP RPG PDC +Y RTG+CGYG+ CR+NHP A
Sbjct: 27 GLQESMWRLGLGSDS----------YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRAS 76
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMR 134
+ + PER G+P C +YLKTGTCK+G++CK+HHPK+ G+ V NI G P+R
Sbjct: 77 VEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVR 136
Query: 135 QDEKSCPYYMRTG----------------------------SFLPSSGL----QYAGSLP 162
+ + C YY++TG F PS QY G
Sbjct: 137 EGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSS 196
Query: 163 TWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP--------TS 213
+ + R S +QG +Y P++++P G+VP PGW+ Y + P LSP TS
Sbjct: 197 SLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSAPVSPALSPGAQHAVGATS 252
Query: 214 IAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
+ G + S+ G + + + Q PERP +P+C+YY+ TG CK+G CKF
Sbjct: 253 LYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKF 312
Query: 272 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
HHP++R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 313 HHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 228 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
D G M L S + PERP PDC YYM TG C YG C+++HP++R S + +
Sbjct: 25 DTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVR 82
Query: 288 PLG-LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G P R G+ C Y G CKFG +C+F HP
Sbjct: 83 ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
>gi|297824887|ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326165|gb|EFH56585.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 184/356 (51%), Gaps = 62/356 (17%)
Query: 13 ANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH 72
+ +EE++WRL + YP RPG PDC +Y RTG+CGYG+ CR+NH
Sbjct: 23 GDADTTGLEESMWRLGLGCES----------YPERPGAPDCAYYMRTGVCGYGNRCRYNH 72
Query: 73 P---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNI 128
P A + + PER G+P C +YLKTGTCK+G++CK+HHPK+ G+ V NI
Sbjct: 73 PRDRASVEAAVRATGQYPERLGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNI 132
Query: 129 LGLPMRQDEKSCPYYMRTG-----------------------------SFLPSSGL---- 155
G P+R+ + C YY++TG F PS
Sbjct: 133 YGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPPASAPQFYPSVQSLMPD 192
Query: 156 QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP--- 211
QY G + + R S +QG +Y P++++P G+VP PGW+ Y + P LSP
Sbjct: 193 QYGGPSSSLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSAPVSPALSPGAQ 248
Query: 212 -----TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 264
TS+ G + S+ G + + + Q PERP +P+C+YY+ TG CK
Sbjct: 249 HAVGATSLYGVTQLSSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCK 308
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+G CKFHHP++R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 309 FGTSCKFHHPRDRVPPRANCILSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 364
>gi|359491687|ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 183/355 (51%), Gaps = 50/355 (14%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
+++D+ EE L+ + A+ YP RP DC FY RTG C +GSNC+FNHP
Sbjct: 98 KASDDEEEQCENLEDESAAKDDKSARFQ-YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPI 156
Query: 74 ------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SF 126
A + +EE PER GQ +C YYL+TG CK+G C+Y+H K + A PV
Sbjct: 157 RRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLEL 216
Query: 127 NILGLPMRQDEKSCPYYMRTGS-------------------FLPSSGLQYAGSLP----- 162
N LGLP+R EK CPYYMRTGS + SG GS+P
Sbjct: 217 NFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGAS 276
Query: 163 -----TWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNTYMGNIGPLSPTSIAG 216
+WS RA L ++P++ SP+QG+ P P WN Y + L +
Sbjct: 277 QSNMASWSSPRA------LNEPAPFVPIMFSPTQGVPPPNPEWNGYQVFMLLLKRSMHPP 330
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 276
+ ++ G + ++ PERP QP+C Y++ TG CK+ A CK+HHPK
Sbjct: 331 PAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKN 390
Query: 277 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 331
RI +S + GLP RP Q IC++Y+ YGICKFGP C+FDH P+NYG S
Sbjct: 391 RIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDH-----PVNYGNS 440
>gi|295913614|gb|ADG58052.1| transcription factor [Lycoris longituba]
Length = 303
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 169/275 (61%), Gaps = 44/275 (16%)
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGS----------- 148
KTGTCK+G+TCKYHHP++R A P N+LGLPMRQ+EKSCPYYMRTGS
Sbjct: 4 KTGTCKFGATCKYHHPRERYDAPPAPLNMLGLPMRQEEKSCPYYMRTGSCKFGIACKFNH 63
Query: 149 ----FLPSSGLQYAGS-------------LPTWSLQRAPYL-SSRLQGTQSYMPLIV-SP 189
L SS + GS L W L R PY+ + R+QG +Y+P+I+ P
Sbjct: 64 PQPATLGSSAYGFTGSSVASQLSMPLMGGLSAWPLAR-PYIPNPRMQGLSTYVPVILPQP 122
Query: 190 SQGIVPA-PGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 248
SQG +P GW+TY G++ L T + G I +++ H S+++ NLPER
Sbjct: 123 SQGAMPMQQGWSTYTGSVSELPSTDVHGHAQIPNTK--------LHAHSGSSTTINLPER 174
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
PDQP+C+YYM TG+CKYG CK+HHPKER +S + +GPLGLP RPG A+C+ Y+ YG
Sbjct: 175 PDQPECQYYMKTGSCKYGTTCKYHHPKERYMESPFT-LGPLGLPLRPGHAVCTFYTAYGS 233
Query: 309 CKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM 343
C++G +C++DHP G+ Y ++P ++ D SL
Sbjct: 234 CRYGSSCKYDHPLMGF---YNYAVPAIAAPDPSLF 265
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%)
Query: 71 NHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
N +A G+ LPER QP+C YY+KTG+CKYG+TCKYHHPK+R P + LG
Sbjct: 156 NTKLHAHSGSSTTINLPERPDQPECQYYMKTGSCKYGTTCKYHHPKERYMESPFTLGPLG 215
Query: 131 LPMRQDEKSCPYYMRTGSFLPSSGLQY 157
LP+R C +Y GS S +Y
Sbjct: 216 LPLRPGHAVCTFYTAYGSCRYGSSCKY 242
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--------LPERNGQPDCG 96
P RP +P+C +Y +TG C YG+ C+++HP +Y E LP R G C
Sbjct: 172 PERPDQPECQYYMKTGSCKYGTTCKYHHPK-----ERYMESPFTLGPLGLPLRPGHAVCT 226
Query: 97 YYLKTGTCKYGSTCKYHHP 115
+Y G+C+YGS+CKY HP
Sbjct: 227 FYTAYGSCRYGSSCKYDHP 245
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
P R E C +Y RTG C +G C+FNHP A G+
Sbjct: 36 PMRQEEKSCPYYMRTGSCKFGIACKFNHPQPATLGS 71
>gi|255559296|ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223540053|gb|EEF41630.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 478
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 192/356 (53%), Gaps = 64/356 (17%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
+EE++WRL + N GGG + YP RPG PDC++Y RTG CGYG+ CR+NHP A
Sbjct: 29 GLEESMWRLGL--NNSGGGES----YPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAA 82
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMR 134
+ E PER G+P C +YLKTGTCK+G++CK+HHPK G+ V N G P+R
Sbjct: 83 VEAAVRATGEYPERIGEPSCEFYLKTGTCKFGASCKFHHPKHGGGSLSHVPLNTHGYPLR 142
Query: 135 QDEKSCPYYMRTG-----------------SFLPSSGLQY-----AGSLP--------TW 164
E C YY++TG S LP S Q+ + S+P +
Sbjct: 143 PGENECSYYLKTGQCKFGITCKFHHPQPAGSSLPESAPQFYQPVQSPSIPIPDQYGGASA 202
Query: 165 SLQRAPYL--SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP--------TS 213
SL+ P L S +QG +Y P++ SP G+VP PGW+ Y + P LSP TS
Sbjct: 203 SLRVRPPLLPGSYVQG--AYGPVLFSP--GVVPIPGWSPYSAPVSPVLSPSAQPAVGATS 258
Query: 214 IAGSNLIYSSR-------NQGDLGAGAQMHILSAS--SQNLPERPDQPDCRYYMNTGTCK 264
+ G + SS A A LS + Q PERP +P+C+YY+ TG CK
Sbjct: 259 LYGVTQLSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYLRTGDCK 318
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+G+ C++HHP++R+ + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 319 FGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYLRNGHCKFGSTCKFDHP 374
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQ 92
G + +P RPGEP+C +Y RTG C +GS+CR++HP LP R G
Sbjct: 292 GTQKEQTFPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGA 351
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
C +YL+ G CK+GSTCK+ HP + P + +++ +P+
Sbjct: 352 QHCTFYLRNGHCKFGSTCKFDHPMETMRYSPSASSLIDMPV 392
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 298
S ++ PERP PDC YYM TG C YG C+++HP+ R A AA P R G+
Sbjct: 42 SGGGESYPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAVEAAVRATGE-YPERIGEP 100
Query: 299 ICSNYSMYGICKFGPTCRFDHPYAG 323
C Y G CKFG +C+F HP G
Sbjct: 101 SCEFYLKTGTCKFGASCKFHHPKHG 125
>gi|225456787|ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera]
gi|297733636|emb|CBI14883.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 185/363 (50%), Gaps = 63/363 (17%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
+++D+ EE L+ + A+ YP RP DC FY RTG C +GSNC+FNHP
Sbjct: 98 KASDDEEEQCENLEDESAAKDDKSARFQ-YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPI 156
Query: 74 ------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SF 126
A + +EE PER GQ +C YYL+TG CK+G C+Y+H K + A PV
Sbjct: 157 RRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLEL 216
Query: 127 NILGLPMRQDEKSCPYYMRTGS-------------------FLPSSGLQYAGSLP----- 162
N LGLP+R EK CPYYMRTGS + SG GS+P
Sbjct: 217 NFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGAS 276
Query: 163 -----TWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNTYMGNIGPLS------ 210
+WS RA L ++P++ SP+QG+ P P WN Y + P
Sbjct: 277 QSNMASWSSPRA------LNEPAPFVPIMFSPTQGVPPPNPEWNGYQAPLYPPPPPERSM 330
Query: 211 --PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 268
P + +N + G Q I ++ PERP QP+C Y++ TG CK+ A
Sbjct: 331 HPPPAFVINNTATDANVYGHHQQQQQSLI-----EDFPERPGQPECSYFLKTGDCKFRAA 385
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
CK+HHPK RI +S + GLP RP Q IC++Y+ YGICKFGP C+FDH P+NY
Sbjct: 386 CKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDH-----PVNY 440
Query: 329 GLS 331
G S
Sbjct: 441 GNS 443
>gi|145331437|ref|NP_001078077.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|330255804|gb|AEC10898.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
Length = 442
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 180/326 (55%), Gaps = 41/326 (12%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
++E++WRL + + YP RPG PDC +Y RTG+CGYG+ CR+NHP A
Sbjct: 27 GLQESMWRLGLGSDS----------YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRAS 76
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMR 134
+ + PER G+P C +YLKTGTCK+G++CK+HHPK+ G+ V NI G P+R
Sbjct: 77 VEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVR 136
Query: 135 QDE--------KSCP-YYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPL 185
+ S P +Y S +P QY G + + R S +QG +Y P+
Sbjct: 137 EPAGTTVPPPPASAPQFYPSVQSLMPD---QYGGPSSSLRVARTLLPGSYMQG--AYGPM 191
Query: 186 IVSPSQGIVPAPGWNTYMGNIGP-LSP--------TSIAGSNLIYSSRNQ--GDLGAGAQ 234
+++P G+VP PGW+ Y + P LSP TS+ G + S+ G + +
Sbjct: 192 LLTP--GVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSS 249
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR 294
+ Q PERP +P+C+YY+ TG CK+G CKFHHP++R+ A + P+GLP R
Sbjct: 250 PTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLR 309
Query: 295 PGQAICSNYSMYGICKFGPTCRFDHP 320
PG C+ Y G CKFG TC+FDHP
Sbjct: 310 PGVQRCTFYVQNGFCKFGSTCKFDHP 335
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 228 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
D G M L S + PERP PDC YYM TG C YG C+++HP++R S + +
Sbjct: 25 DTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVR 82
Query: 288 PLG-LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G P R G+ C Y G CKFG +C+F HP
Sbjct: 83 ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
>gi|30685903|ref|NP_851041.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|62901381|sp|Q8L7N8.2|C3H57_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 57;
Short=AtC3H57; AltName: Full=Zinc finger type
domain-containing protein ZFN3
gi|332004925|gb|AED92308.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 375
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 199/397 (50%), Gaps = 79/397 (19%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+ A+W++ + + G YP R GEPDC +Y RTGLC +GS CRFNHP
Sbjct: 19 QNAMWQMNLGSDDTMGVDGS---YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVI 75
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQD 136
A+ + E PER GQP+C +YLKTGTCK+G TCK+HHP+++ G G VS N+L P+R +
Sbjct: 76 ATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPN 135
Query: 137 EKSCPYYMRTG------------------SFLPS-------SGLQYAGSLPTWSLQRAPY 171
E C Y++R G + + S S LQ P++S R +
Sbjct: 136 EDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSF 195
Query: 172 LSS--RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL 229
+++ RLQ + S SQG + + G+++ GN PL ++ N+
Sbjct: 196 VANPPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALPRENV---------- 239
Query: 230 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 289
PERP QP+C++YM TG CK+G CKFHHP++R + +
Sbjct: 240 ---------------FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSV 284
Query: 290 GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS 349
GLP RPG+ +C YS YGICKFGP+C+FDHP + N + P S SSL AI+
Sbjct: 285 GLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPS---SSLHQETAIT 341
Query: 350 -------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 378
+ S+E P + +P D V QH
Sbjct: 342 TELRNLLVSSSVEAKP---TSLPETTSAKDTIVDAQH 375
>gi|79516213|ref|NP_197356.2| zinc finger CCCH domain-containing protein 58 [Arabidopsis
thaliana]
gi|62901486|sp|Q6NPN3.1|C3H58_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 58;
Short=AtC3H58; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 3
gi|38603838|gb|AAR24664.1| At5g18550 [Arabidopsis thaliana]
gi|110740171|dbj|BAF01984.1| zinc finger like protein [Arabidopsis thaliana]
gi|332005195|gb|AED92578.1| zinc finger CCCH domain-containing protein 58 [Arabidopsis
thaliana]
Length = 465
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 183/355 (51%), Gaps = 54/355 (15%)
Query: 13 ANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH 72
A + IE ++WRL + +P RP EPDC++Y RTG+CGYGS CRFNH
Sbjct: 22 AQGTETGIEASMWRLGLRGGG-----GGGETFPERPDEPDCIYYLRTGVCGYGSRCRFNH 76
Query: 73 PAYAA--QGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVS 125
P A G E E PER GQP C ++++TGTCK+G++CKYHHP+ G PVS
Sbjct: 77 PRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVS 136
Query: 126 FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLP----------TWSLQRAPYLSSR 175
N +G P+R EK C Y+MRTG S +Y +P L P +
Sbjct: 137 LNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPS 196
Query: 176 LQ-----GTQSYMPLIVSPSQ-------------------GIVPAPGWNTYMGNIGPL-S 210
LQ +Q Y ++ P G+VP GWN Y ++ + S
Sbjct: 197 LQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPS 256
Query: 211 PTS--IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 264
P + G++ +Y S + +G +S Q P+RP+QP+C+Y+M TG CK
Sbjct: 257 PGTQPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCK 316
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+G C+FHHP E A AS + +GLP RPG C++++ +GICKFGP C+FDH
Sbjct: 317 FGTSCRFHHPME-AASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370
>gi|356563166|ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 501
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 173/337 (51%), Gaps = 50/337 (14%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQYREE 85
+ +EGG A YP RP DC FY +TG C +G NC+FNHP + A REE
Sbjct: 137 EKKEGGNSGLAQHYPLRPEAEDCAFYIKTGNCKFGFNCKFNHPIRRKSQAVKEKAGEREE 196
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNILGLPMRQDEKSCPY 142
ER+G +C YY ++G CK+G +CKY+H + + P + N LGLP+R E+ CPY
Sbjct: 197 TTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRLGERECPY 256
Query: 143 YMRTGSFL---------------------PSSGLQYAGSL----------PTWSLQRAPY 171
YMRTGS P+SG GS+ P+WS R
Sbjct: 257 YMRTGSCKFGANCKFNHPDPTAVGGVGGDPASGYGNGGSISLQGVSQTSVPSWSSPRT-- 314
Query: 172 LSSRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 230
L + ++P+++SP+QG+ + WN Y ++ S + N +
Sbjct: 315 ----LNESSPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVM---NNPAID 367
Query: 231 AGAQMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 289
MH PERP +P+C Y++ TG CK+ ++CKF+HPK R+A+ N+
Sbjct: 368 TNVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDK 427
Query: 290 GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
GLP RP Q++CS+YS YGICKFGP C+FDHP P+
Sbjct: 428 GLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPV 464
>gi|242056893|ref|XP_002457592.1| hypothetical protein SORBIDRAFT_03g009920 [Sorghum bicolor]
gi|241929567|gb|EES02712.1| hypothetical protein SORBIDRAFT_03g009920 [Sorghum bicolor]
Length = 449
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 207/441 (46%), Gaps = 79/441 (17%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------ 73
+EE++ RL + D+ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 18 LEESMRRLGLGDDGEPG----EEKLPERPGEADCAYYLRTGACGYGERCRYNHPRDRPPP 73
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
E PER GQP C YY K GTCK+GS CK+ HP++ G PV+ N G P+
Sbjct: 74 VNGVGKTAGMVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-GGFVPVTLNSSGFPL 132
Query: 134 RQDEKSCPYYMRTG---------------SFLPSSGLQYAGSLPT-------------WS 165
R EK C YYM+TG FL + Y P+ W
Sbjct: 133 RLGEKECSYYMKTGHCKFGSTCKFHHPEVGFLSETPGMYPPVQPSPISSSHPYPHLANWQ 192
Query: 166 LQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTY---MGNIGPLSPTSIAGSNLIY 221
+ R P + S L G SY P+++ P+ ++P GWN Y M + P + Y
Sbjct: 193 MGRPPVVPGSFLPG--SYPPMMLPPT--VMPMQGWNPYVSPMNQVTPAGGQQAVPAGASY 248
Query: 222 SSRNQGDLGAG------AQMHILSASSQN------LPERPDQPDCRYYMNTGTCKYGADC 269
+QG A AQ++ S +S + PERP QP+C +YM TGTCKYGA C
Sbjct: 249 GLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYMKTGTCKYGAVC 308
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 329
K+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 309 KYHHPQYFSGPKSNYMLSPLGLPLRPGSQPCAYYAHHGFCKFGPTCKFDHP--------- 359
Query: 330 LSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD------AVSVQHQNPDM 383
+ P SI SSL + HS +P +P ++ +SD V NP
Sbjct: 360 MGTPNYSISASSLADVPVAPYPHSFPVTP-----MPPYLPSSDLRPQYTLVKDSSANPPP 414
Query: 384 KNSTTKNSDDSSKVDHPPHSV 404
TT S + PH++
Sbjct: 415 APGTTYGPVGSMSKVYAPHTL 435
>gi|42573387|ref|NP_974790.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|21536865|gb|AAM61197.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|332004924|gb|AED92307.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 354
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 197/394 (50%), Gaps = 79/394 (20%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W++ + + G YP R GEPDC +Y RTGLC +GS CRFNHP A
Sbjct: 1 MWQMNLGSDDTMG---VDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATA 57
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKS 139
+ + E PER GQP+C +YLKTGTCK+G TCK+HHP+++ G G VS N+L P+R +E
Sbjct: 58 RIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDD 117
Query: 140 CPYYMRTG------------------SFLPS-------SGLQYAGSLPTWSLQRAPYLSS 174
C Y++R G + + S S LQ P++S R ++++
Sbjct: 118 CSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVAN 177
Query: 175 --RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG 232
RLQ + S SQG + + G+++ GN PL ++ N+
Sbjct: 178 PPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALPRENV------------- 218
Query: 233 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
PERP QP+C++YM TG CK+G CKFHHP++R + +GLP
Sbjct: 219 ------------FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLP 266
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS--- 349
RPG+ +C YS YGICKFGP+C+FDHP + N + P S SSL AI+
Sbjct: 267 LRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPS---SSLHQETAITTEL 323
Query: 350 ----ATHSIETSPDASSKIPNWVQNSDA-VSVQH 378
+ S+E P + +P D V QH
Sbjct: 324 RNLLVSSSVEAKP---TSLPETTSAKDTIVDAQH 354
>gi|301133584|gb|ADK63414.1| CCCH type zinc finger protein [Brassica rapa]
Length = 455
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 185/358 (51%), Gaps = 73/358 (20%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----- 73
+E ++WRL + GGG A YP R EPDC++Y RTG+CGYGS CRFNHP
Sbjct: 28 RVEASMWRLGL----TGGGEA----YPERSNEPDCIYYLRTGVCGYGSRCRFNHPRDRGA 79
Query: 74 ------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSF 126
G LPER GQP C ++++TGTCKYG +CKYHHP+ G+ PVS
Sbjct: 80 VVGGVRGGGGGGGGGDGALPERMGQPVCQHFMRTGTCKYGGSCKYHHPRQGGGSVAPVSL 139
Query: 127 NILGLPMRQDEKSCPYYMRTG-------------------------SFLPS-------SG 154
+ LG P+R EK C YYMRTG + P+ S
Sbjct: 140 SYLGYPLRSGEKECSYYMRTGQCKFGLTCRFNHPVPQPQQQQPQTQNIYPTLQSQPMPSA 199
Query: 155 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS 213
QY L SL YL S Y P +V P G+V P WN Y ++ + SP +
Sbjct: 200 QQYGLVLTRPSLLPGSYLPS------PYGPPMVLPP-GMVTYPNWNPYPASLTAMPSPGT 252
Query: 214 ----IAGSNLIY--------SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG 261
G++ +Y + G +G + ++ + P+RPDQP+C+Y+M TG
Sbjct: 253 GTQQSIGTSSVYGMAPLSPSGTAYTGTYQSGGP-SLTTSKEEPFPQRPDQPECQYFMRTG 311
Query: 262 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
CK+GA C++HHP + + + + P+GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 312 DCKFGASCRYHHPLDAVQTNTGVLLSPIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 369
>gi|358348997|ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355504462|gb|AES85665.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 511
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 178/342 (52%), Gaps = 60/342 (17%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREE 85
D + GG Q YP RP DC FY +TG C +G NC+FNHP + A R+E
Sbjct: 161 DERSNGGAEQ---YPLRPEAEDCSFYLKTGTCKFGFNCKFNHPLGRRNQVFRERAGERDE 217
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYM 144
L ER+ Q +C YY ++G CK+G CK+ H + + A V N LGLP+R EK CPYYM
Sbjct: 218 LEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLELNFLGLPIRLGEKECPYYM 277
Query: 145 RTGSFLPSSGLQYA----------------GSLPTWSLQRA------PYLSSR-LQGTQS 181
RTGS + ++ G+ T SLQ P+ S+R T
Sbjct: 278 RTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGSTTSLQDVSQSSTPPWSSTRKFNETAP 337
Query: 182 YMPLIVSPSQGIVP-APGWNTYMG-------NIGPLSPTSIAGSNLIYSSRNQGDLGAGA 233
++P+I+SP+ G P + WN Y ++ P SP ++ N + A
Sbjct: 338 FVPIIISPTPGASPRSSDWNGYQAPFYLSERSMHPPSPYAV----------NNPAMEMNA 387
Query: 234 QMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
MH + + PERP +P+C +++ TG CK+ + CKFHHPK RI + N+ GLP
Sbjct: 388 YMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPCNLSDKGLP 447
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPP 334
RPGQ +C++YS YGICKFGP C++DHP ++LPP
Sbjct: 448 LRPGQNVCTHYSRYGICKFGPACKYDHP---------INLPP 480
>gi|357477237|ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509959|gb|AES91101.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 573
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 166/317 (52%), Gaps = 42/317 (13%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-------AAQGAQYREELPERNGQPDCG 96
+P RP DC FY +TG C +G NC+FNHP + + REE E GQ +C
Sbjct: 231 FPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECK 290
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYMRTGSFL----- 150
YY ++G CK+G CKY+H R P+S N LGLP+R E+ CPYYMRTGS
Sbjct: 291 YYQRSGGCKFGKACKYNHS--RGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNC 348
Query: 151 --------------PSSGLQYAGSLPTWSLQRAPY--LSSRLQGTQSYMPLIVSPSQGIV 194
P SG GS+ + + P SSR + PL+ +P+QG+
Sbjct: 349 RFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSRKLNETPFAPLMPTPTQGLA 408
Query: 195 P-APGWNTYMGNIGPLSPTSIAGSNLIYSSR---NQGDLGAGAQMHILSAS-SQNLPERP 249
P WN Y +P ++ + SS N + MH + PERP
Sbjct: 409 PQTSDWNGYQ------APAYLSERIMHPSSTYVMNNPTIDTNVYMHHQKQMPFEVFPERP 462
Query: 250 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 309
+P+C +++ TG CK+ ++CKFHHPK R+A+ N+ GLP RP Q++CS+YS YGIC
Sbjct: 463 GEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGIC 522
Query: 310 KFGPTCRFDHPYAGYPI 326
KFGP CRFDHP + P+
Sbjct: 523 KFGPACRFDHPESALPL 539
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSR-P 295
S + P RP+ DC +YM TG+CK+G +CKF+HP R Q+ A + P
Sbjct: 225 SDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENA 284
Query: 296 GQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYG 329
GQ C Y G CKFG C+++H + G PI G
Sbjct: 285 GQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLG 329
>gi|356563888|ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 484
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 185/377 (49%), Gaps = 88/377 (23%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+A + +EE+ W+L G+A A YP RP E DC++Y RTG CGYG+ CRFN
Sbjct: 21 LAAGADAGLEESSWQL---------GLAGAESYPMRPDEADCIYYLRTGFCGYGTRCRFN 71
Query: 72 HP----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSF 126
HP A A+ E PER GQP C Y+++TG CK+G +CKYHHP+ G A PV
Sbjct: 72 HPRDRAAVIGAAARTGGEFPERVGQPVCQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPL 131
Query: 127 NILGLPMRQDEKSCPYYMRTGSFLPSSGLQY-----AGS--------------------- 160
N G P+R EK C YY++TG + ++ AG
Sbjct: 132 NYYGYPLRVAEKECSYYVKTGQCKFGATCKFHHPQPAGVQALAPSPVPPVSPLPVPVPSP 191
Query: 161 -LPTWSL-------------QRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGN 205
PT + R P L S +QG Y P++VSP+ +VP GW+ Y
Sbjct: 192 MYPTVQIPSGPSQQQYGVLVARPPMLPGSVVQG--PYGPMVVSPA--MVPFSGWSPYQAP 247
Query: 206 ----IGPLSPTSIAGSNLIY------------------SSRNQGDLGAGAQMHILSASSQ 243
+ P S TS AGS Y S + G GA + H
Sbjct: 248 ATNPVLPSSNTSNAGSTQFYGISQLPSSPATFTGPYQPSGSSIGPSGASQKEH------- 300
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
PERPDQP+C +YM TG CK+G C++HHP ++ A A + P+GLP RPG C++Y
Sbjct: 301 PFPERPDQPECHHYMKTGECKFGLSCRYHHPPDKSAPKATVTLSPVGLPLRPGAPPCTHY 360
Query: 304 SMYGICKFGPTCRFDHP 320
+ G+CKFG C+FDHP
Sbjct: 361 TQRGVCKFGSACKFDHP 377
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 13/101 (12%)
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 299
A +++ P RPD+ DC YY+ TG C YG C+F+HP++R A A+ P R GQ +
Sbjct: 39 AGAESYPMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAARTGGEFPERVGQPV 98
Query: 300 CSNYSMYGICKFGPTCRFDHP-------------YAGYPIN 327
C + G+CKFG +C++ HP Y GYP+
Sbjct: 99 CQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPLNYYGYPLR 139
>gi|224107375|ref|XP_002314462.1| predicted protein [Populus trichocarpa]
gi|222863502|gb|EEF00633.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 187/359 (52%), Gaps = 69/359 (19%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YA 76
+EE +W+L+I + + S YP RP E DC++Y RTG CGYG+ CR+NHP A
Sbjct: 27 GLEEGVWQLEIGETE--------SEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTA 78
Query: 77 AQGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPM 133
GA E PER GQP C YY++TGTCK+G++CKY+HPK + PVS N G P+
Sbjct: 79 VLGAARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPL 138
Query: 134 RQDEKSCPYYMRTGSF-----------------LPSSGLQ-YAGSLPTWSL--------- 166
R E+ C YY++TG +P+ L S+P +L
Sbjct: 139 RPGERECTYYIKTGQCKFGATCKFHHPQPANMQIPAQSLAPQVASVPAHTLYPTMQSPSV 198
Query: 167 ----------QRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS- 213
R P L S +QG Y P+++SPS +VP P W+ Y + P+ SP +
Sbjct: 199 PSSQQYGVMVARPPLLPGSYVQGP--YGPVLLSPS--LVPYPSWSPYPAPVSPVASPNAQ 254
Query: 214 -IAGSNLIYSSRN---QGDLGAGAQMHILSA-----SSQN---LPERPDQPDCRYYMNTG 261
GS +Y GA I +A SSQ PERP QP+C+YYM TG
Sbjct: 255 PAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPERPGQPECQYYMKTG 314
Query: 262 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
CK+ + C++HHP E + + P+GLP RPG C++Y+ +G CKFGP C+FDHP
Sbjct: 315 DCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYTQHGQCKFGPACKFDHP 373
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 223 SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 282
S + L G + + PERP++ DC YY+ TG C YGA C+++HP++R A
Sbjct: 22 SGQETGLEEGVWQLEIGETESEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLG 81
Query: 283 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
A+ G P R GQ +C Y G CKFG +C+++HP G G S+ P+S+
Sbjct: 82 AARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQG-----GSSVRPVSL 131
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYL 99
+P RPG+P+C +Y +TG C + S+CR++HP LP R G P C +Y
Sbjct: 298 FPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYT 357
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ HP P + ++ +P+
Sbjct: 358 QHGQCKFGPACKFDHPMGTLSYSPSASSLADMPV 391
>gi|297807877|ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
gi|297317659|gb|EFH48081.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
Length = 474
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 176/326 (53%), Gaps = 53/326 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA--QGAQYRE--ELPERNGQPDCGYYL 99
+P RP EPDC+++ RTG+CGYGS CRFNHP A G+ E E PER GQP C +++
Sbjct: 48 FPERPDEPDCIYFLRTGVCGYGSRCRFNHPRNRAPVLGSLRTEAGEFPERMGQPVCQHFM 107
Query: 100 KTGTCKYGSTCKYHHPKDRNGAG----PVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGL 155
+TGTCK+G++CKYHHP+ G G PVS N +G P+R EK C Y+MRTG S
Sbjct: 108 RTGTCKFGASCKYHHPRQGGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTC 167
Query: 156 QYAGSLP----------------------------------TWSLQRAPYL-SSRLQGTQ 180
+Y +P L R L S +Q
Sbjct: 168 RYHHPVPPGVQAASQQQQQLSAGPTMYPSLQSQSVPSSQQYGVVLARPQILPGSYVQSPY 227
Query: 181 SYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS--IAGSNLIYS----SRNQGDLGAGA 233
Y +++ P G+VP GWN Y ++ + SP + G++ +Y S + +G
Sbjct: 228 GYGQMVIPP--GMVPYSGWNPYQASVSAIPSPGTQPSIGTSSVYGITPLSPSAPAYQSGP 285
Query: 234 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
++ Q P+RP+QP+C+Y+M TG CK+G+ C+FHHP E A AS + +GLP
Sbjct: 286 SSTGVTNKEQTFPQRPEQPECQYFMRTGDCKFGSSCRFHHPME-AASPEASTLSHIGLPL 344
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDH 319
RPG C++++ +GICKFGP C+FDH
Sbjct: 345 RPGAVPCTHFAQHGICKFGPACKFDH 370
>gi|224123154|ref|XP_002330352.1| predicted protein [Populus trichocarpa]
gi|222871556|gb|EEF08687.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 186/363 (51%), Gaps = 77/363 (21%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----- 73
+EE +W+L + + + S YP R E DC++Y RTG CGYG+ CR+NHP
Sbjct: 27 GLEEGVWQLGLGETE--------SEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNA 78
Query: 74 ---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNIL 129
A A GA+Y PER GQP C YY++TGTCK+G++CKYHHPK G A PVS N
Sbjct: 79 VLGAARAGGAEY----PERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYY 134
Query: 130 GLPMRQDEKSCPYYMRTGSFLPSSGLQYAG------SLPTWSL----------------- 166
G P+R E+ C YY++TG + ++ +P SL
Sbjct: 135 GYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPVPGPTLYPSVQ 194
Query: 167 --------------QRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-S 210
R P L S +QG Y P+++SPS +VP P WN Y + P+ S
Sbjct: 195 SPSVPSSQQYGVMVARPPLLPGSYVQGP--YGPVLLSPS--VVPYPSWNPYPAPVSPVAS 250
Query: 211 PTS--IAGSNLIYSSRN---QGDLGAGAQMHI-----LSASSQN---LPERPDQPDCRYY 257
P + GS +Y GA I S+S+Q PERP QP+C+YY
Sbjct: 251 PNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPERPGQPECQYY 310
Query: 258 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 317
+ TG CK+ + C++HHP E + + + P+GLP RPG CS+Y+ G CKFGP C+F
Sbjct: 311 IKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPACKF 370
Query: 318 DHP 320
DHP
Sbjct: 371 DHP 373
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%)
Query: 233 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
A + A PER QP C+YYM TGTCK+GA CK+HHPK+ ++ ++ G P
Sbjct: 78 AVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYP 137
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
RPG+ C+ Y G CKFG TC+F HP G
Sbjct: 138 LRPGERECTYYIKTGQCKFGATCKFHHPQPG 168
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%)
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP 288
L G L + PER ++ DC YY+ TG C YGA C+++HP++R A A+ G
Sbjct: 28 LEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAVLGAARAGG 87
Query: 289 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
P R GQ +C Y G CKFG +C++ HP G
Sbjct: 88 AEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQG 122
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C +Y +TG C + S+CR++HP + LP R G P C +Y
Sbjct: 298 FPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYT 357
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ HP P + ++ +P+
Sbjct: 358 QRGQCKFGPACKFDHPMGTLSYSPSASSLADMPV 391
>gi|226499720|ref|NP_001150792.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195638922|gb|ACG38929.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195641882|gb|ACG40409.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 447
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 193/383 (50%), Gaps = 65/383 (16%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCAYYLRTGACGYGERCRYNHP 67
Query: 74 -----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
G E PER GQP C YY K GTCK+GS CK+ HP++ +G PV+ N
Sbjct: 68 RDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-SGFVPVALNN 126
Query: 129 LGLPMRQDEKSCPYYMRTG---------------SFLPSSGLQYAGSLPT---------- 163
G P+R EK C YYM+TG FL + Y P+
Sbjct: 127 SGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPELGFLTETPGMYPPVQPSPISSPHPYPH 186
Query: 164 ---WSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL 219
W + R + S L G Y P+++ P+ ++P GWN Y + P++ T+ AG
Sbjct: 187 HSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPY---VSPMNQTTPAGGQQ 239
Query: 220 I------YSSRNQGDLGAG------AQMHILSASSQNL-----PERPDQPDCRYYMNTGT 262
Y +Q A AQ++ SS N+ PERP QP+C +YM TGT
Sbjct: 240 AVPAGPSYGLSHQEPTSAVTYGSHYAQLYSSGTSSSNIQEYVFPERPGQPECEHYMKTGT 299
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 300 CKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPTCKFDHP-M 358
Query: 323 GYPINYGLSLPPLSILDSSLMNH 345
G P NY L P L+ L + H
Sbjct: 359 GTP-NYSLPAPSLTDLPVAPYPH 380
>gi|226530435|ref|NP_001147888.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195614408|gb|ACG29034.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 451
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 205/454 (45%), Gaps = 79/454 (17%)
Query: 7 VKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGS 66
KS + +E+++ RL + D+ E G P RPGE DC +Y RTG CGYG
Sbjct: 7 AKSGGADAGTGTGLEDSMRRLGLGDDGEAG----EEKLPERPGEADCAYYLRTGACGYGE 62
Query: 67 NCRFNHP------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
CR+NHP E PER GQP C YY K GTCK+GS CK+ HP++ G
Sbjct: 63 RCRYNHPRDRPAPVNGVGKTAVTVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-GG 121
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTG---------------SFLPSSGLQYAGSLP--- 162
PV+ N G P+R EK C YYM+TG FL + Y P
Sbjct: 122 FVPVTLNSGGFPLRLGEKECSYYMKTGHCKFGATCKFHHPELGFLTETPGMYPPVQPPPI 181
Query: 163 ----------TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 211
W + R P + S L G SY P+++ ++P GWN Y+ + ++P
Sbjct: 182 SSSHPYPHLANWQMGRPPVVPGSFLPG--SYPPMVLP--HTVIPMQGWNPYVPPMNQVTP 237
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ---------------NLPERPDQPDCRY 256
+ + +S G + M S +Q PERP QP+C +
Sbjct: 238 AGGQQAVPVGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEH 297
Query: 257 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 316
YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+
Sbjct: 298 YMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYAHHGYCKFGPTCK 357
Query: 317 FDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA--- 373
FDHP + P SI SSL + S +P +P+++ +SD
Sbjct: 358 FDHP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----VPSYLPSSDLRPQ 403
Query: 374 ---VSVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 404
V NP TT S + PH++
Sbjct: 404 YTQVKDSSANPPPSPGTTYGPVGSISKVYAPHTL 437
>gi|255540399|ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223550379|gb|EEF51866.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 495
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 163/313 (52%), Gaps = 38/313 (12%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELPERNGQPDCGYY 98
YP RP DC +Y +TG C +GSNC+FNHP + + + REE +R GQ +C YY
Sbjct: 141 YPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYY 200
Query: 99 LKTGTCKYGSTCKYHHPKDR-------NGAGP-VSFNILGLPMRQDEKSCPYYMRTGSFL 150
L+TG CKYG C+Y+H + + P + N LGLP+R E+ CPYYMR GS
Sbjct: 201 LRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGLPIRPGERECPYYMRNGSCK 260
Query: 151 PSSGLQYAGSLPT---------WSLQRAPYLSSRLQG-------------TQSYMPLIVS 188
+ ++ PT +S + L + LQ T S+M ++ S
Sbjct: 261 YGANCRFNHPDPTTVGGSDPLAFSNGGSASLQNSLQSNIASWSSPGGLNETPSFMSIMFS 320
Query: 189 PSQGI-VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPE 247
P+QG+ P WN Y PL S+ S D A + + PE
Sbjct: 321 PTQGVPSQNPEWNGYQVCYFPLYERSMHQPPAYVISNPATDTNVYAHQQQIQV--EEFPE 378
Query: 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
RP QP+C Y+M TG CK+ ++CK+HHPK I++S + GLP RPGQ ICS YS YG
Sbjct: 379 RPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRYG 438
Query: 308 ICKFGPTCRFDHP 320
ICKFGP C+FDHP
Sbjct: 439 ICKFGPACKFDHP 451
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 71/196 (36%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQD------EK 138
+ P R DC YY+KTGTCK+GS CK++HP R + + + R++ +
Sbjct: 140 QYPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRK----MQVSKEKVKEREEATDRPGQT 195
Query: 139 SCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPG 198
C YY+RTG G +Y G ++ RA PL++ + PA
Sbjct: 196 ECKYYLRTG------GCKY-GKACRYNHSRA-------------KPLLLQAKTAVFPALD 235
Query: 199 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYM 258
N ++G LP RP + +C YYM
Sbjct: 236 LN-FLG----------------------------------------LPIRPGERECPYYM 254
Query: 259 NTGTCKYGADCKFHHP 274
G+CKYGA+C+F+HP
Sbjct: 255 RNGSCKYGANCRFNHP 270
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDC 95
Q +P RPG+P+C ++ +TG C + SNC+++HP + + LP R GQ C
Sbjct: 372 QVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNIC 431
Query: 96 GYYLKTGTCKYGSTCKYHHP 115
YY + G CK+G CK+ HP
Sbjct: 432 SYYSRYGICKFGPACKFDHP 451
>gi|79395677|ref|NP_187292.2| zinc finger CCCH domain-containing protein 34 [Arabidopsis
thaliana]
gi|150387824|sp|Q9SQU4.2|C3H34_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 34;
Short=AtC3H34; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 2
gi|110741372|dbj|BAF02236.1| hypothetical protein [Arabidopsis thaliana]
gi|332640868|gb|AEE74389.1| zinc finger CCCH domain-containing protein 34 [Arabidopsis
thaliana]
Length = 462
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 185/354 (52%), Gaps = 58/354 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQ 78
+E +WRL + GGG ++ YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 29 VEAPMWRLGLSGGGGGGGGGES--YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAV 86
Query: 79 GAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLP 132
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG P
Sbjct: 87 IGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYP 146
Query: 133 MRQDEKSCPYYMRTGSFLPSSGLQYAGSLPT----------------------------- 163
+R EK C YY+RTG ++ +P
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 206
Query: 164 ----------WSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPT 212
L R +L+ + P+++ P G+VP GWN Y ++ + SP
Sbjct: 207 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPP--GMVPYSGWNPYQASLSAMPSPG 264
Query: 213 S--IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 265
+ GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+
Sbjct: 265 TQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKF 324
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G+ C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 325 GSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C +
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108
Query: 303 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 109 FMRTGTCKFGASCKYHHPRQG---GGGGSVAPVSL 140
>gi|110740437|dbj|BAF02113.1| hypothetical protein [Arabidopsis thaliana]
Length = 462
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 185/354 (52%), Gaps = 58/354 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQ 78
+E +WRL + GGG ++ YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 29 VEAPMWRLGLSGGGGGGGGGES--YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAV 86
Query: 79 GAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLP 132
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG P
Sbjct: 87 IGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYP 146
Query: 133 MRQDEKSCPYYMRTGSFLPSSGLQYAGSLPT----------------------------- 163
+R EK C YY+RTG ++ +P
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 206
Query: 164 ----------WSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPT 212
L R +L+ + P+++ P G+VP GWN Y ++ + SP
Sbjct: 207 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPP--GMVPYSGWNPYQASLSAMPSPG 264
Query: 213 S--IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 265
+ GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+
Sbjct: 265 TQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKF 324
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G+ C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 325 GSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C +
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108
Query: 303 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 109 FMRTGTCKFGASCKYHHPRQG---GGGGSVAPVSL 140
>gi|356535424|ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 494
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 196/355 (55%), Gaps = 70/355 (19%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+EE++W L + GGG + YP RPG P+C++Y RTG+CGYGS CR+NHP A
Sbjct: 29 GLEESMWHLTL-----GGGES----YPERPGVPNCVYYMRTGVCGYGSRCRYNHPRDRAA 79
Query: 79 GAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLP 132
A + PER G+P C YYLKTGTCK+G++CK+HHPK NG G ++ NI G P
Sbjct: 80 VAAAVRVTGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLTQAPLNIYGYP 137
Query: 133 MRQDEKSCPYYMRT-----------------GSFLPSSG---------------LQYAGS 160
+R EK C YY++T G+ LP+S QY G+
Sbjct: 138 LRPGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPTSAPQFYQQVQSPTVPLPEQYGGA 197
Query: 161 LPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPT---SIA 215
+ + R P L S +QG +Y P+++SP G+V PGW+ Y + P LSP ++
Sbjct: 198 STSLRVARPPVLPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVLSPGAQPTVG 253
Query: 216 GSNLIYSSRNQGDLGAGAQMHI-LSASS---------QNLPERPDQPDCRYYMNTGTCKY 265
++L ++ A A+ + LS+++ Q PERP +P+C+YY+ TG CK+
Sbjct: 254 ATSLYGVTQLSSPTSAFARPYTPLSSTTGPSGSNLKDQFFPERPGEPECQYYLRTGDCKF 313
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G C++HHP++ I A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 314 GLACRYHHPRDHIV--ARPLLSPVGLPLRPGVQPCAFYLQNGHCKFGSTCKFDHP 366
>gi|3738297|gb|AAC63639.1| unknown protein [Arabidopsis thaliana]
Length = 553
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 170/335 (50%), Gaps = 62/335 (18%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP RPG PDC +Y RTG+CGYG+ CR+NHP A + + PER G+P C +YLK
Sbjct: 116 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLK 175
Query: 101 TGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPYYMRTG------------ 147
TGTCK+G++CK+HHPK+ G+ V NI G P+R+ + C YY++TG
Sbjct: 176 TGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHH 235
Query: 148 ----------------SFLPSSGL----QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIV 187
F PS QY G + + R S +QG +Y P+++
Sbjct: 236 PQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQG--AYGPMLL 293
Query: 188 SPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS----- 242
+P G+VP PGW+ Y L A + S Q +GA + + +S
Sbjct: 294 TP--GVVPIPGWSPYSSLTVSLLLLLQAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSL 351
Query: 243 -----------------QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
Q PERP +P+C+YY+ TG CK+G CKFHHP++R+ A
Sbjct: 352 PGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCV 411
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 412 LSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 446
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-LPSRPGQAIC 300
S + PERP PDC YYM TG C YG C+++HP++R S + + G P R G+ C
Sbjct: 113 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVRATGQYPERFGEPPC 170
Query: 301 SNYSMYGICKFGPTCRFDHP 320
Y G CKFG +C+F HP
Sbjct: 171 QFYLKTGTCKFGASCKFHHP 190
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNG 91
G + + +P RPGEP+C +Y +TG C +G++C+F+HP A LP R G
Sbjct: 363 GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPG 422
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y++ G CK+GSTCK+ HP
Sbjct: 423 VQRCTFYVQNGFCKFGSTCKFDHP 446
>gi|223948749|gb|ACN28458.1| unknown [Zea mays]
gi|224031379|gb|ACN34765.1| unknown [Zea mays]
gi|407232626|gb|AFT82655.1| C3H12 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414876866|tpg|DAA53997.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 3
[Zea mays]
Length = 451
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 205/454 (45%), Gaps = 79/454 (17%)
Query: 7 VKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGS 66
KS + +E+++ RL + D+ E G P RPGE DC +Y RTG CGYG
Sbjct: 7 AKSGGADAGTGTGLEDSMRRLGLGDDGEAG----EEKLPERPGEADCAYYLRTGACGYGE 62
Query: 67 NCRFNHP------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
CR+NHP E PER GQP C YY K GTCK+GS CK+ HP++ G
Sbjct: 63 RCRYNHPRDRPAPVNGVGKTAVTVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-GG 121
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTG---------------SFLPSSGLQYAGSLP--- 162
PV+ N G P+R EK C YYM+TG FL + Y P
Sbjct: 122 FVPVTLNSGGFPLRLGEKECSYYMKTGHCKFGATCKFHHPELGFLTETPGMYPPVQPPPI 181
Query: 163 ----------TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 211
W + R P + S L G SY P+++ ++P GWN Y+ + ++P
Sbjct: 182 SSSHPYPHLANWQMGRPPVVPGSFLPG--SYPPMVLP--HTVIPMQGWNPYVPPMNQVTP 237
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ---------------NLPERPDQPDCRY 256
+ + +S G + M S +Q PERP QP+C +
Sbjct: 238 AGGQQAVPVGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEH 297
Query: 257 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 316
YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+
Sbjct: 298 YMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYAHHGYCKFGPTCK 357
Query: 317 FDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA--- 373
FDHP + P SI SSL + S +P +P+++ +SD
Sbjct: 358 FDHP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----MPSYLPSSDLRPQ 403
Query: 374 ---VSVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 404
V NP TT S + PH++
Sbjct: 404 YTQVKDSSANPPPSPGTTYGPVGSISKVYAPHTL 437
>gi|225432344|ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera]
gi|297736890|emb|CBI26091.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 187/387 (48%), Gaps = 96/387 (24%)
Query: 3 DNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLC 62
D Q + VA +EE +W+L + E YP RP E DC++Y +TG C
Sbjct: 16 DPSQEWTGPVAE---TGLEEPLWQLGLGGGGEA--------YPERPDEADCIYYLKTGFC 64
Query: 63 GYGSNCRFNHPA-YAAQGAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
GYG+ CRFNHP G R E PER GQP C +Y+KTGTCK+G++CKYHHP+
Sbjct: 65 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQG 124
Query: 119 NG-AGPVSFNILGLPMRQDEKSCPYYMRTG--SFLPSSGLQY------------------ 157
G PV+ N G P+R EK C YY++TG F + +
Sbjct: 125 GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPA 184
Query: 158 ------------AGSLPT-----WSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGW 199
+ S+P+ + R P L SS G Y P+++ P G+VP PGW
Sbjct: 185 PVPAHTLYPTVQSPSVPSSQQYGLVVARPPLLPSSYFHG--PYSPVLIPP--GMVPFPGW 240
Query: 200 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS----------------- 242
+ Y + P++ S Q +G+G QM+ L+ S
Sbjct: 241 SHYPAPVSPVA-----------SPSTQPTVGSG-QMYGLTPLSPSAPAYTGPYTPLPSSV 288
Query: 243 ---------QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
Q PERP QP+C+YYM TG CK+G+ CK+HHP E + P+GLP
Sbjct: 289 GPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPL 348
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDHP 320
RPG C++Y+ GICKFGPTC+FDHP
Sbjct: 349 RPGAPQCTHYAQRGICKFGPTCKFDHP 375
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ PERPD+ DC YY+ TG C YGA C+F+HP++R G P R GQ +C
Sbjct: 44 EAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQF 103
Query: 303 YSMYGICKFGPTCRFDHP-------------YAGYPINYG 329
Y G CKFG +C++ HP Y GYP+ G
Sbjct: 104 YMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPG 143
>gi|297807679|ref|XP_002871723.1| hypothetical protein ARALYDRAFT_488510 [Arabidopsis lyrata subsp.
lyrata]
gi|297317560|gb|EFH47982.1| hypothetical protein ARALYDRAFT_488510 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 191/360 (53%), Gaps = 47/360 (13%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP R GEPDC +Y RTGLC +G CRFNHP A+ + E PER GQP+C +YLK
Sbjct: 7 YPERHGEPDCAYYIRTGLCRFGFTCRFNHPHDRKLVIATARIKGEYPERIGQPECEFYLK 66
Query: 101 TGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG--SFLPSSGLQY 157
TGTCK+G TCK+HHP+++ G G VS N+LG P+R +E C Y++RTG F + +
Sbjct: 67 TGTCKFGVTCKFHHPRNKAGNDGRVSVNVLGYPLRPNEDDCSYFLRTGHCKFGGTCKFNH 126
Query: 158 AGSLPT---WSLQRAPYLSSR---LQGTQSY----MPLIVSPSQGIVPAPGWNTYMGNIG 207
+ T SL+ +P S+ G QSY + +P P W
Sbjct: 127 PQTQSTNLMVSLRGSPVYSALQPPTDGQQSYSWPRTSFVANP-------PRWQ------D 173
Query: 208 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYG 266
P S +S + L S + G+ + + +N+ PERP QP+C++YM TG CK+G
Sbjct: 174 PSSFSSGSQGGLFSSGFHSGN---SVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFG 230
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
CKFHHP++R + + +GLP R G+ +C YS YGICKFGP+C+FDHP +
Sbjct: 231 TVCKFHHPRDRQTPAPDCALSSVGLPLRQGEPLCVFYSRYGICKFGPSCKFDHPMRVFTY 290
Query: 327 NYGLSLPPLSILDSSLMNHQAIS-------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 378
N + P S SSL AI+ + S+E +P + +P D V QH
Sbjct: 291 NNNDASPSPS---SSLHQETAITTQLRNLLVSSSVEATP---TTLPETTSAKDTIVDAQH 344
>gi|57900443|dbj|BAD87736.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 322
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 158/294 (53%), Gaps = 52/294 (17%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCP 141
+ E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R EK C
Sbjct: 2 KGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECA 61
Query: 142 YYMRTGS-------------------------FLPS------SGLQYAGSLPTWSLQRAP 170
YY++TG PS +G Y G++ +W+ R
Sbjct: 62 YYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGS 121
Query: 171 YLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYSSRN 225
++ S R Q +Y P+IV QG+V P WN+Y G + P+S + G+ Y +
Sbjct: 122 FIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQ 179
Query: 226 QGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCKFH 272
Q D AG Q + S + PERPDQP+C+YYM TG CK+GA CKFH
Sbjct: 180 QVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFH 239
Query: 273 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
HP+ R + + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 240 HPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 293
>gi|356521891|ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 484
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 186/374 (49%), Gaps = 82/374 (21%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
VA +EE+ W+L G+ A YP RP E DC++Y RTG CGYG+ CRFN
Sbjct: 21 VAADVDAGLEESSWQL---------GLPGAESYPMRPDEADCIYYLRTGFCGYGTRCRFN 71
Query: 72 HPA--YAAQGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSF 126
HP A GA R E PER GQP C YY++TG+CK+G++CKYHHP+ G A PV
Sbjct: 72 HPRDRAAVIGAAPRTGGEFPERVGQPVCQYYMRTGSCKFGASCKYHHPRQVPGTATPVPL 131
Query: 127 NILGLPMRQDEKSCPYYMRTG--------------------------------------- 147
N G P+R +K C YY++TG
Sbjct: 132 NYYGYPLRVGQKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAPSPVPPVSPLPVPVPSP 191
Query: 148 ---SFLPSSG--LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNT 201
+ P SG Q G L + R P L S +QG Y P++VSP+ +VP GW+
Sbjct: 192 MYPTVHPPSGPSQQQYGVL----VARPPMLPGSVVQG--PYGPMVVSPT--MVPFSGWSP 243
Query: 202 YMGN----IGPLSPTSIAGSNLIYSSRNQGDLGA---------GAQMHILSASSQN--LP 246
Y + P S TS GS +Y A G+ + AS + P
Sbjct: 244 YQAPATNPLLPSSTTSNVGSTQLYGITQLPSSAATYTGPYQPSGSSIGPSGASQKEHPFP 303
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
ERPDQP+C +YM TG CK+G C++HHP ++ A A + P+GLP RPG C++Y+
Sbjct: 304 ERPDQPECHHYMKTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPCTHYTQR 363
Query: 307 GICKFGPTCRFDHP 320
G+CKFG C+FDHP
Sbjct: 364 GVCKFGSACKFDHP 377
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 301
+++ P RPD+ DC YY+ TG C YG C+F+HP++R A A+ P R GQ +C
Sbjct: 41 AESYPMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQ 100
Query: 302 NYSMYGICKFGPTCRFDHP-------------YAGYPINYG 329
Y G CKFG +C++ HP Y GYP+ G
Sbjct: 101 YYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVG 141
>gi|147853205|emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 187/387 (48%), Gaps = 96/387 (24%)
Query: 3 DNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLC 62
D Q + VA +EE +W L + E YP RP E DC++Y +TG C
Sbjct: 56 DPSQEWTGPVAE---TGLEEPLWXLGLGGGGEA--------YPERPDEADCIYYLKTGFC 104
Query: 63 GYGSNCRFNHPA-YAAQGAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
GYG+ CRFNHP G R E PER GQP C +Y+KTGTCK+G++CKYHHP+
Sbjct: 105 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQG 164
Query: 119 NG-AGPVSFNILGLPMRQDEKSCPYYMRTG--SFLPSSGLQY------------------ 157
G PV+ N G P+R EK C YY++TG F + +
Sbjct: 165 GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPA 224
Query: 158 ------------AGSLPT-----WSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGW 199
+ S+P+ + R P L SS + G Y P+++ P G+VP PGW
Sbjct: 225 PVPAHTLYPXVQSPSVPSSQQYGLVVARPPLLPSSYIHG--PYSPVLIPP--GMVPFPGW 280
Query: 200 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS----------------- 242
+ Y + P++ S Q +G+G QM+ L+ S
Sbjct: 281 SHYPAPVSPVA-----------SPSTQPTVGSG-QMYGLTPLSPSAPAYTGPYTPLPSSV 328
Query: 243 ---------QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
Q PERP QP+C+YYM TG CK+G+ CK+HHP E + P+GLP
Sbjct: 329 GPSSSSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPL 388
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDHP 320
RPG C++Y+ GICKFGPTC+FDHP
Sbjct: 389 RPGAPQCTHYAQRGICKFGPTCKFDHP 415
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ PERPD+ DC YY+ TG C YGA C+F+HP++R G P R GQ +C
Sbjct: 84 EAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQF 143
Query: 303 YSMYGICKFGPTCRFDHP-------------YAGYPINYG 329
Y G CKFG +C++ HP Y GYP+ G
Sbjct: 144 YMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPG 183
>gi|6437560|gb|AAF08587.1|AC011623_20 hypothetical protein [Arabidopsis thaliana]
Length = 437
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 183/350 (52%), Gaps = 58/350 (16%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQY 82
+WRL + GGG ++ YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 8 MWRLGLSGGGGGGGGGES--YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGV 65
Query: 83 REE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLPMRQD 136
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG P+R
Sbjct: 66 RGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPG 125
Query: 137 EKSCPYYMRTGSFLPSSGLQYAGSLPT--------------------------------- 163
EK C YY+RTG ++ +P
Sbjct: 126 EKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIP 185
Query: 164 ------WSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS--I 214
L R +L+ + P+++ P G+VP GWN Y ++ + SP +
Sbjct: 186 SSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPP--GMVPYSGWNPYQASLSAMPSPGTQPS 243
Query: 215 AGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 269
GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+G+ C
Sbjct: 244 IGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSC 303
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 304 RYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 353
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C +
Sbjct: 24 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 83
Query: 303 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 84 FMRTGTCKFGASCKYHHPRQG---GGGGSVAPVSL 115
>gi|297735285|emb|CBI17647.3| unnamed protein product [Vitis vinifera]
Length = 304
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 168/294 (57%), Gaps = 33/294 (11%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSFL----- 150
YYLKTGTCK+G+TCK+HHP+D+ G AG VS NILG P+R DE C YY+RTG
Sbjct: 14 YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTC 73
Query: 151 ------PSSGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYM 203
PSS + + W L RA ++ S R Q SY PL++ QG+V PGWN Y
Sbjct: 74 KFHHPQPSSMMVSLRGITNWPLSRASFIPSPRWQAPSSYAPLMLP--QGVVSVPGWNAYS 131
Query: 204 GNIGPLSPTS--IAGSNLIY-SSRNQGDLGAGAQ------------MHILSASSQNL-PE 247
G +G S + G+N IY +SR G+Q + + +N+ PE
Sbjct: 132 GQLGSPSESQQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPE 191
Query: 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
RP QP+C++YM TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YG
Sbjct: 192 RPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYG 251
Query: 308 ICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDAS 361
ICKFGP+C+FDHP + N S + + L+ H+A AT + DAS
Sbjct: 252 ICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLL-HKA-QATFTARDKTDAS 303
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 22/85 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-------------LPERN 90
+P RPG+P+C FY +TG C +G+ CRF+HP RE LP R
Sbjct: 189 FPERPGQPECQFYMKTGDCKFGAVCRFHHP---------RERLIPTPDCVLSPIGLPLRP 239
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHP 115
G+P C +Y + G CK+G +CK+ HP
Sbjct: 240 GEPLCIFYSRYGICKFGPSCKFDHP 264
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKS 139
Q PER GQP+C +Y+KTG CK+G+ C++HHP++R P + +GLP+R E
Sbjct: 184 QRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPL 243
Query: 140 CPYYMRTG--SFLPSSGLQ-----YAGSLPTWSLQRAPYLSSRLQGTQS 181
C +Y R G F PS +A +L S AP + L Q+
Sbjct: 244 CIFYSRYGICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLLHKAQA 292
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 28 KIHDNQEGGGVA-----QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K H ++ G+A YP RP E DC +Y RTG C +GS C+F+HP
Sbjct: 28 KFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTCKFHHP 78
>gi|356513852|ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 167/334 (50%), Gaps = 48/334 (14%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQYREELP 87
+EG YP RP DC FY +TG C +G NC+FNHP + A REE
Sbjct: 129 KEGRNSGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGEREETT 188
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNILGLPMRQDEKSCPYYM 144
ER+G +C YY ++G CK+G +CKY+H + + P + N LGLP+R E+ CPYYM
Sbjct: 189 ERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPGERECPYYM 248
Query: 145 RTGSFLPSSGLQY-------------------------------AGSLPTWSLQRAPYLS 173
RTGS + ++ S+P+WS R
Sbjct: 249 RTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISLQGVSQTSVPSWSSPRT---- 304
Query: 174 SRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG 232
L ++P+++SP+QG+ + WN Y ++ L SI + + D
Sbjct: 305 --LNEASPFVPMMLSPTQGVSTQSSDWNGYQASV-YLPERSIHPPSTFVMNNPAIDTNV- 360
Query: 233 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
H PERP +P+C +++ TG CK+ ++CKFHHPK R+ + N+ GLP
Sbjct: 361 YMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLP 420
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
RP Q++CS+YS YGICKFGP C+FDHP P+
Sbjct: 421 LRPDQSVCSHYSRYGICKFGPACKFDHPINLQPV 454
>gi|224119564|ref|XP_002318105.1| predicted protein [Populus trichocarpa]
gi|222858778|gb|EEE96325.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 175/349 (50%), Gaps = 57/349 (16%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
D++E R +N G Q YP RP DC FY +TG C +G+NC+FNHP
Sbjct: 99 GDDLENKNERSNDIENNNSSGYHQ---YPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRR 155
Query: 77 AQGAQY--------REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV---- 124
Q REE E+ +C YYLKTG CKYG+ C+++H + + PV
Sbjct: 156 KNQVQLTVKEKTKEREEATEKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPM 215
Query: 125 ----SFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQ 180
N LGLP+R EK C Y+MR GS + +Y PT ++ + + S+ L G
Sbjct: 216 SPALELNFLGLPIRLGEKECEYFMRNGSCKFGANCKYNHPDPT-AVGGSDHPSTFLNGGS 274
Query: 181 ------------------------SYMPLIVSPSQGIVP-APGWNTYMGNIGPLS----- 210
S++P++ SP+QG+ P +P WN Y + P
Sbjct: 275 ASLPVPSSSSVGSWSSPRALNDPTSFVPIMFSPNQGVPPQSPDWNGYQAPLYPPERSLHP 334
Query: 211 PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 270
P S A N+ S ++ A Q I+ PERP QP C +YM G CK+ ++CK
Sbjct: 335 PLSYALINIATES----NVYAPQQQQIVV---DEFPERPGQPQCSFYMKFGDCKFKSNCK 387
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+HHPK RI++S + GLP RP Q ICS+YS YGICKFGP+C+FDH
Sbjct: 388 YHHPKNRISKSPPLTLSDKGLPLRPDQNICSHYSRYGICKFGPSCKFDH 436
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHH-------PKERIAQSAASNIGPLGLPSRPGQAI 299
E+P +C+YY+ TG CKYG C+F+H P +I S A + LGLP R G+
Sbjct: 175 EKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPALELNFLGLPIRLGEKE 234
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C + G CKFG C+++HP
Sbjct: 235 CEYFMRNGSCKFGANCKYNHP 255
>gi|356500268|ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 471
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 213/421 (50%), Gaps = 74/421 (17%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++W L + GGG + YP R G P+C++Y RTG+CGYG CR+NHP A
Sbjct: 30 LEESMWHLTL-----GGGES----YPERSGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAV 80
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPM 133
A + + PER G+P C YYLKTGTCK+G++CK+HHPK NG G +S N+ G P+
Sbjct: 81 AAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLSQAPLNVYGYPL 138
Query: 134 RQDEKSCPYYMRT-----------------GSFLPSSG---------------LQYAGSL 161
R EK C YY++T G+ LP+S QY G+
Sbjct: 139 RPGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPASAPQFYQQVQSPTVPLPEQYGGAS 198
Query: 162 PTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SP-------- 211
+ + R P L S +QG +Y P+++SP G+V PGW+ Y + P+ SP
Sbjct: 199 SSLRVARPPILPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVPSPGAQPAVGA 254
Query: 212 TSIAGSNLIYS-----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 266
TS+ G + S +R L + + Q PERP +P+C+YY+ TG CK+G
Sbjct: 255 TSLYGVTQLSSPTSAFARPYTPLPSTTDPSRSNPKEQLYPERPGEPECQYYLRTGDCKFG 314
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
C++HHP++ I A + P+GLP RPG C+ Y G CKFG TC+FDHP +
Sbjct: 315 LACRYHHPRDHIV--ARPLLSPVGLPLRPGLQPCAFYLQNGHCKFGSTCKFDHPLGS--M 370
Query: 327 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNS 386
Y S S++D + + S + S +S P + S S + P NS
Sbjct: 371 RYSPSA--SSLIDVPVTPYPVGSLLSQLAPSTTSSDLRPELMSGSKKESFSARIPSSGNS 428
Query: 387 T 387
+
Sbjct: 429 S 429
>gi|297833390|ref|XP_002884577.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
lyrata]
gi|297330417|gb|EFH60836.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 182/355 (51%), Gaps = 68/355 (19%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAA 77
+E ++WRL + YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 28 GLEASMWRLGLSGGG-------GESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGA 80
Query: 78 QGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGL 131
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG
Sbjct: 81 VIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGY 140
Query: 132 PMRQDEKSCPYYMRTG---------------------------------SFLPS------ 152
P+R EK C YY+RTG + P+
Sbjct: 141 PLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQHQQQQQPQLQTIYPTLQSQSV 200
Query: 153 -SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-S 210
S QY L SL YL S Y P +V P G+VP GWN Y ++ + S
Sbjct: 201 PSSQQYGLVLTRPSLLPGSYLPS------PYGPPMVLP-PGMVPYSGWNPYQASLSAMPS 253
Query: 211 PTS--IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 264
P + GS+ +Y S + Q S +S+ P+RPDQP+C+Y+M TG CK
Sbjct: 254 PGTQPSIGSSSVYGITPLSPSVTAYTGAYQSGPSSNTSKEFPQRPDQPECQYFMRTGDCK 313
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+G+ C++HHP + + + +GLP RPG A C+++S +GICKFGP CRFDH
Sbjct: 314 FGSSCRYHHPVDAVPPKTGLVLSSIGLPLRPGVAQCTHFSQHGICKFGPACRFDH 368
>gi|15242694|ref|NP_201131.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
gi|62901484|sp|Q5RJC5.2|C3H67_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 67;
Short=AtC3H67; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 5
gi|10177307|dbj|BAB10568.1| unnamed protein product [Arabidopsis thaliana]
gi|110737489|dbj|BAF00687.1| hypothetical protein [Arabidopsis thaliana]
gi|332010341|gb|AED97724.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
Length = 435
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 175/348 (50%), Gaps = 46/348 (13%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V + + A++ + +EG YP RP DC FY RTG C YGS+C+F
Sbjct: 65 SVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKF 124
Query: 71 NHPA-----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV- 124
NHP + + R+E E +C YY +TG CKYG +C++ H K+ N V
Sbjct: 125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVP 184
Query: 125 SFNILGLPMRQDEKSCPYYMRTGS------------------------FLPSSGLQYAGS 160
N LGLP+R EK CP+YMR GS + ++G ++
Sbjct: 185 ELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPK 244
Query: 161 LPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNTYMGNIG------PLSP 211
P+ + + + + GT + ++P + S+G+ P A WN Y + PL+P
Sbjct: 245 APSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAP 304
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
+S +N + + + + S + PERPDQP+C YY+ TG CK+ CK+
Sbjct: 305 SSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKY 357
Query: 272 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 358 HHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 307 GICKFGPTCRFDHP 320
G CKFG C+F+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R SFN GLP+R D+ C +
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 388
Query: 143 YMRTGSFLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 178
Y R G ++ S+ PT+S + + +R G
Sbjct: 389 YSRYGICKFGPACRFDHSIPPTFSPSSSQTVEARQVG 425
>gi|413947007|gb|AFW79656.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 448
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 195/405 (48%), Gaps = 75/405 (18%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
Query: 74 -----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
G E PER GQP C YY K GTCK+GS CK+ HP++ +G PV+ N
Sbjct: 68 RDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-SGFVPVALNN 126
Query: 129 LGLPMRQDEKSCPYYMRTG---------------SFLPSSGLQYAGSLPT---------- 163
G P+R EK C YYM+TG FL + Y P+
Sbjct: 127 SGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPELGFLTETPGMYPPVQPSPISSPHPYPH 186
Query: 164 ---WSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG--- 216
W + R + S L G Y P+++ P+ ++P GWN Y + P++ T+ AG
Sbjct: 187 HSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPY---VSPMNQTTPAGGQQ 239
Query: 217 ----------------SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNT 260
S + Y S + L + + + PERP QP+C +YM T
Sbjct: 240 AVPAGPSYGLSHQEPTSAVTYGS-HYAQLYSSSGTSSSNIQEYVFPERPGQPECEHYMKT 298
Query: 261 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
GTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 299 GTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPTCKFDHP 358
Query: 321 YAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIP 365
G P NY L P SL + H+ +P A +P
Sbjct: 359 -MGTP-NYSLPAP-------SLTDVPVAPYPHTFSVTPIAPYLLP 394
>gi|356507323|ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 570
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 163/316 (51%), Gaps = 40/316 (12%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQYREELPERNGQP 93
+A YP RP DC FY +TG C +G NC+FNHP + A REE ER+GQ
Sbjct: 225 GRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQM 284
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPS 152
+C YYL++G CK+G CK++H + + + A N LGLP+R EK C YYMRTGS
Sbjct: 285 ECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFG 344
Query: 153 SGLQYAGSLPT----------------WSLQRAPYLSSR-------LQGTQSYMPLIVSP 189
+ ++ PT SLQ S L + ++P+I+SP
Sbjct: 345 ANCRFNHPDPTTVGGGDSPSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSP 404
Query: 190 SQGIVP-APGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLGAGAQMHILSASSQN 244
+ G+ P + WN Y +P ++ +L Y N H +
Sbjct: 405 NPGVSPQSSEWNGYQ------APVYLSERSLHPPSTYVMNNPAMESNVYMHHQKQMLVEE 458
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PERP +P+C Y++ TG CK+ ++CKFHHPK RIA+ N+ GLP RP Q +C+ Y
Sbjct: 459 FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYR 518
Query: 305 MYGICKFGPTCRFDHP 320
YGICKFGP C+FDHP
Sbjct: 519 RYGICKFGPACKFDHP 534
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 218 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
N S + GD+ G + S +Q P RP+ DC +Y+ TGTCK+G +CKF+HP R
Sbjct: 204 NESESDKVGGDV-EGVKGERSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRR 262
Query: 278 IAQSAASNIGPLGLPS-RPGQAICSNYSMYGICKFGPTCRFDH 319
Q+ N G + R GQ C Y G CKFG C+F+H
Sbjct: 263 KNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNH 305
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEP+C ++ +TG C + SNC+F+HP A + LP R Q C YY
Sbjct: 459 FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYR 518
Query: 100 KTGTCKYGSTCKYHHPKDRNGAG 122
+ G CK+G CK+ HP AG
Sbjct: 519 RYGICKFGPACKFDHPAPSTMAG 541
>gi|356536737|ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 473
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/354 (37%), Positives = 188/354 (53%), Gaps = 70/354 (19%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
+EE++W L + GGG YP RPG P+C++Y RTG+CGYG CR+NHP A
Sbjct: 29 GLEESMWHLTL-----GGG---GESYPERPGVPNCVYYMRTGVCGYGGRCRYNHPHDRAA 80
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLP 132
+ + PER G+P C YYLKTGTCK+G++CK+HHPK NG +S N+ G P
Sbjct: 81 VVAAVRVTGDYPERLGEPPCQYYLKTGTCKFGASCKFHHPK--NGGEYLSQAPLNVYGYP 138
Query: 133 MRQDEKSCPYYMRT-----------------GSFLPSSGL---------------QYAGS 160
+R DEK C YY++T G+ LP+S QY G+
Sbjct: 139 LRSDEKECSYYLKTGQCKYGISCKFHHPQPAGTSLPASAAQFYQQVQSPTVPLPEQYVGA 198
Query: 161 LPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTY----MGNIGPLSPTSIA 215
+ + R P L S +QG +Y P+ +SP G+V PGWN Y M + P + +
Sbjct: 199 SSSLRVARPPILPGSYVQG--AYGPVFLSP--GVVQFPGWNHYSVRGMCAL-PGTQPGVG 253
Query: 216 GSNLIYSSRNQGDLGAGAQMHILSASSQNL----------PERPDQPDCRYYMNTGTCKY 265
++L ++ A A+ + L SS L P+RP +PDC+YY+ TG CK+
Sbjct: 254 ATSLYGVTQLSSPTSAFARPYTLLPSSTGLSGSNLKEQLYPKRPGEPDCQYYLRTGDCKF 313
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C++HHP++ + A + P+GLP RPG C+ Y G CKFG TC+FDH
Sbjct: 314 GLACQYHHPQDHVV--AQPLLSPVGLPLRPGLQPCAFYLQNGHCKFGSTCKFDH 365
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R + CS Y
Sbjct: 90 DYPERLGEPPCQYYLKTGTCKFGASCKFHHPKNGGEYLSQAPLNVYGYPLRSDEKECSYY 149
Query: 304 SMYGICKFGPTCRFDHP 320
G CK+G +C+F HP
Sbjct: 150 LKTGQCKYGISCKFHHP 166
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPGEPDC +Y RTG C +G C+++HP AQ LP R G C +YL+
Sbjct: 293 YPKRPGEPDCQYYLRTGDCKFGLACQYHHPQDHVVAQPLLSPVGLPLRPGLQPCAFYLQN 352
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
G CK+GSTCK+ H P + +++ +P+
Sbjct: 353 GHCKFGSTCKFDHSLGSMRYSPSASSLIDVPV 384
>gi|357129786|ref|XP_003566542.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 2 [Brachypodium distachyon]
Length = 472
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 179/356 (50%), Gaps = 66/356 (18%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + E A P RPGE +C++Y RTG C YG +CR+NHP A A
Sbjct: 33 LEESMWRLGLGGGGEA-----APRLPERPGEANCIYYLRTGSCSYGESCRYNHPRDRAAA 87
Query: 77 AQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL 131
G E PER GQP C YY+K GTCK+GS CKY+HP++ PV+ N G
Sbjct: 88 FNGGARTTIAMGVEYPERPGQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQPVALNTSGY 147
Query: 132 PMRQDEKSCPYYMRTG-------------------------SFLP-------SSGLQYAG 159
P+R EK C YY++TG S P SS L Y
Sbjct: 148 PLRPGEKECSYYIKTGHCKFGSTCKFHHPDGPELGVVSETPSMYPPAQPLPMSSPLTYP- 206
Query: 160 SLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG--- 216
L +W L R L Q P +V PS ++P GWN YM ++ L+ S G
Sbjct: 207 PLASWQLGRPSVLPGSFY--QGSYPPMVHPS-AVIPMQGWNPYMSSMNQLA--SAGGQQN 261
Query: 217 --SNLIYSSRNQG---DLGAGAQMHILSASSQ-------NLPERPDQPDCRYYMNTGTCK 264
+ +Y +QG + G+ L +S+ PERP QP+C +YM TGTCK
Sbjct: 262 VQAGPLYGLSHQGPSSSVAYGSNYAPLPSSTWPSSNKQVAFPERPGQPECHHYMKTGTCK 321
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+GA CK+ HP+ A ++ + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 322 FGATCKYSHPQYLSAPNSNCMLSPLGLPIRPGAQQCVYYSQHGFCKFGPRCKFDHP 377
>gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana]
gi|56790210|gb|AAW30022.1| At5g63260 [Arabidopsis thaliana]
Length = 435
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 175/348 (50%), Gaps = 46/348 (13%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V + + A++ + +EG YP +P DC FY RTG C YGS+C+F
Sbjct: 65 SVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPVKPDSEDCSFYMRTGSCKYGSSCKF 124
Query: 71 NHPA-----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV- 124
NHP + + R+E E +C YY +TG CKYG +C++ H K+ N V
Sbjct: 125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVP 184
Query: 125 SFNILGLPMRQDEKSCPYYMRTGS------------------------FLPSSGLQYAGS 160
N LGLP+R EK CP+YMR GS + ++G ++
Sbjct: 185 ELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPK 244
Query: 161 LPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNTYMGNIG------PLSP 211
P+ + + + + GT + ++P + S+G+ P A WN Y + PL+P
Sbjct: 245 APSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAP 304
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
+S +N + + + + S + PERPDQP+C YY+ TG CK+ CK+
Sbjct: 305 SSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKY 357
Query: 272 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 358 HHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 307 GICKFGPTCRFDHP 320
G CKFG C+F+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R SFN GLP+R D+ C +
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 388
Query: 143 YMRTGSFLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 178
Y R G ++ S+ PT+S + + +R G
Sbjct: 389 YSRYGICKFGPACRFDHSIPPTFSPSSSQTVEARQVG 425
>gi|297596471|ref|NP_001042632.2| Os01g0257400 [Oryza sativa Japonica Group]
gi|62901483|sp|Q5NAV3.1|C3H5_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=OsC3H5; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 3
gi|56783956|dbj|BAD81393.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
gi|215707250|dbj|BAG93710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673074|dbj|BAF04546.2| Os01g0257400 [Oryza sativa Japonica Group]
Length = 466
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 197/395 (49%), Gaps = 83/395 (21%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQAS-PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+EE++WR+ + GGG A A+ P RPGE DC++Y RTG CGYG NCR+NHP A
Sbjct: 23 LEESMWRMGLGGGGGGGGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAA 82
Query: 79 GA--------QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
A + E PER GQP C YY+K GTCK+GS CKY HP++ V N G
Sbjct: 83 AAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPRE-GSVQAVMLNSSG 141
Query: 131 LPMRQDEKSCPYYMRTGSFLPSSGLQYA----------------------------GSLP 162
P+R EK C YY++TG S ++ L
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLA 201
Query: 163 TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL-- 219
W + R P L S L G SY P+++ PS +VP GWN Y I P++ + AG +
Sbjct: 202 GWQMGRPPVLPGSFLSG--SYPPMML-PST-VVPMQGWNPY---ISPVNQVASAGGHQTV 254
Query: 220 ----IYSSRNQGDLGA---GAQMHILSASSQN---------LPERPDQPDCRYYMNTGTC 263
Y +QG A G+Q LS+S+ P RP QP+C+YY+ TG+C
Sbjct: 255 QAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSC 314
Query: 264 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY-- 321
K+G+ CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 315 KFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGT 374
Query: 322 ---------------AGYPINYGLS--LPPLSILD 339
A YP+NY ++ PP S D
Sbjct: 375 LSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSSD 409
>gi|194692174|gb|ACF80171.1| unknown [Zea mays]
gi|414879022|tpg|DAA56153.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 320
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 160/297 (53%), Gaps = 55/297 (18%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCP 141
+ E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R +EK C
Sbjct: 2 KGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPNEKECA 61
Query: 142 YYMRTG----------------SFLPSS---------------GLQ-YAGSLPTWSLQRA 169
YY++TG + +PSS G Q Y G++P+W+ RA
Sbjct: 62 YYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMPSWAFPRA 121
Query: 170 PYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGD 228
++ S R Q +Y P+IV QG+V WN+Y G + G+ Y S QG+
Sbjct: 122 SFIPSPRWQSPSNYAPMIVP--QGLVQMQSWNSYTGQL------QSPGAQQTYGSSQQGE 173
Query: 229 LGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
G Q + + +N+ PERPD+P+C+YYM TG CK+GA CKFHHP+
Sbjct: 174 ASTGNQGMLSPYRPSSFPVPQYALQRENVFPERPDEPECQYYMKTGDCKFGAVCKFHHPR 233
Query: 276 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 332
R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 234 VRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFDHPTVVAPMVYAYGF 290
>gi|449432823|ref|XP_004134198.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Cucumis sativus]
Length = 481
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 176/355 (49%), Gaps = 68/355 (19%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY---AAQ 78
+++W L D YP RP E DC++Y RTG CGYGS CRFNHP A
Sbjct: 31 DSLWPLGSRDRDS---------YPERPDEADCIYYLRTGFCGYGSRCRFNHPRERTPALG 81
Query: 79 GAQ-YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQD 136
G++ E PER GQP C YY++TG CK+G++CKYHHP+ G+ PVS N G P+R
Sbjct: 82 GSRPGGREYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPG 141
Query: 137 EKSCPYYMRTGS----------FLPSSGLQY-----------AGSLPTWS---------- 165
EK C YY++ G +GLQ+ AG +P S
Sbjct: 142 EKECSYYLKNGQCKFGATCKFHHPEPAGLQFPAPSPVQVAPIAGQVPAPSVYPPVQSPSA 201
Query: 166 --------LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI--- 214
+ P L S Y P++VSP G+V P W+ Y + P++ S
Sbjct: 202 HSSQQYGVILARPSLLSNPYVPGPYGPMLVSP--GVVQFPSWSPYPAPMSPVASPSAQPS 259
Query: 215 AGSNLIY-----SSRNQGDLGAGAQMHILSASS-----QNLPERPDQPDCRYYMNTGTCK 264
GS +Y S G G+ M SS + PERP QP+C+YYM TG CK
Sbjct: 260 VGSGPLYGMAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPGQPECQYYMRTGDCK 319
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+G+ C++HHP E + + + LGLP RPG C+++ G+CKFGP C+FDH
Sbjct: 320 FGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQRGMCKFGPACKFDH 374
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ PER QP C+YYM TG CK+GA CK+HHP++ + ++ G P RPG+ CS
Sbjct: 88 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 147
Query: 303 YSMYGICKFGPTCRFDHP 320
Y G CKFG TC+F HP
Sbjct: 148 YLKNGQCKFGATCKFHHP 165
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
+ PERPD+ DC YY+ TG C YG+ C+F+HP+ER S G P R GQ +C Y
Sbjct: 43 SYPERPDEADCIYYLRTGFCGYGSRCRFNHPRERTPALGGSRPGGREYPERIGQPVCQYY 102
Query: 304 SMYGICKFGPTCRFDHP 320
G+CKFG +C++ HP
Sbjct: 103 MRTGMCKFGASCKYHHP 119
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +GS+CR++HP + LP R G P C +++
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFM 359
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ H DR P + ++ +P+
Sbjct: 360 QRGMCKFGPACKFDHSMDRLSYSPSASSLADMPV 393
>gi|357129784|ref|XP_003566541.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 1 [Brachypodium distachyon]
Length = 472
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 179/357 (50%), Gaps = 67/357 (18%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + E A P RPGE +C++Y RTG C YG +CR+NHP A A
Sbjct: 32 LEESMWRLGLGGGGEA-----APRLPERPGEANCIYYLRTGSCSYGESCRYNHPRDRAAA 86
Query: 77 AQGAQYRE------ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
R E PER GQP C YY+K GTCK+GS CKY+HP++ PV+ N G
Sbjct: 87 EFNGGARTTIAMGVEYPERPGQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQPVALNTSG 146
Query: 131 LPMRQDEKSCPYYMRTG-------------------------SFLP-------SSGLQYA 158
P+R EK C YY++TG S P SS L Y
Sbjct: 147 YPLRPGEKECSYYIKTGHCKFGSTCKFHHPDGPELGVVSETPSMYPPAQPLPMSSPLTYP 206
Query: 159 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG-- 216
L +W L R L Q P +V PS ++P GWN YM ++ L+ S G
Sbjct: 207 -PLASWQLGRPSVLPGSFY--QGSYPPMVHPS-AVIPMQGWNPYMSSMNQLA--SAGGQQ 260
Query: 217 ---SNLIYSSRNQG---DLGAGAQMHILSASSQ-------NLPERPDQPDCRYYMNTGTC 263
+ +Y +QG + G+ L +S+ PERP QP+C +YM TGTC
Sbjct: 261 NVQAGPLYGLSHQGPSSSVAYGSNYAPLPSSTWPSSNKQVAFPERPGQPECHHYMKTGTC 320
Query: 264 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
K+GA CK+ HP+ A ++ + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 321 KFGATCKYSHPQYLSAPNSNCMLSPLGLPIRPGAQQCVYYSQHGFCKFGPRCKFDHP 377
>gi|15228379|ref|NP_190414.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
gi|62901491|sp|Q9STM4.1|C3H43_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=AtC3H43; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 6
gi|4678344|emb|CAB41154.1| putative protein [Arabidopsis thaliana]
gi|194272236|gb|ACF37203.1| At3g48440 [Arabidopsis thaliana]
gi|332644896|gb|AEE78417.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
Length = 448
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 167/316 (52%), Gaps = 45/316 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPE--RNGQPDCGY 97
YP RPG DC FY RTG C +GS+C+FNHP A+ + RE+ + + G DC Y
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKY 166
Query: 98 YLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG--------- 147
Y +TG CKYG TC+++H ++G A N LGLP+R E CPYYMR G
Sbjct: 167 YFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECK 226
Query: 148 ---------------SFLPSSGLQYAGSLPTWSLQRAPYLSS---RLQGTQSYMPLIVSP 189
SF ++G+ P + Q + S + GT ++P+++S
Sbjct: 227 FNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQ 286
Query: 190 SQGIVPA-PGWNTYMGNI-----GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ 243
+ G+ P WN Y ++ G SP++ + L+ +S + + H + A +
Sbjct: 287 THGVTSQNPEWNGYQASVYSSERGVFSPST---TYLMNNSSAETSMLLSQYRHQMPA--E 341
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
PERPDQP+C YYM TG CK+ +CK+HHPK R+ + + GLP RP Q IC+ Y
Sbjct: 342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYY 401
Query: 304 SMYGICKFGPTCRFDH 319
S YGICKFGP CRFDH
Sbjct: 402 SRYGICKFGPACRFDH 417
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
DC+YY TG CKYG C+F+H + ++A + LGLP RPG+ C Y G CK+G
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 313 PTCRFDHP 320
C+F+HP
Sbjct: 223 AECKFNHP 230
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
P RPG CS Y G CKFG +C+F+HP A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
>gi|334188594|ref|NP_001190604.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
gi|332010342|gb|AED97725.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
Length = 451
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 178/364 (48%), Gaps = 62/364 (17%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V + + A++ + +EG YP RP DC FY RTG C YGS+C+F
Sbjct: 65 SVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKF 124
Query: 71 NHPA-------------YAAQGAQY--REELPERNGQP------DCGYYLKTGTCKYGST 109
NHP G +Y RE + ER+ +C YY +TG CKYG +
Sbjct: 125 NHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRERDEDVENPKLMECKYYFRTGGCKYGES 184
Query: 110 CKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRTGS-------------------- 148
C++ H K+ N V N LGLP+R EK CP+YMR GS
Sbjct: 185 CRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGV 244
Query: 149 ----FLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNT 201
+ ++G ++ P+ + + + + GT + ++P + S+G+ P A WN
Sbjct: 245 DSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNG 304
Query: 202 YMGNIG------PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
Y + PL+P+S +N + + + + S + PERPDQP+C
Sbjct: 305 YQASSAYPPERSPLAPSSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECT 357
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 315
YY+ TG CK+ CK+HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP C
Sbjct: 358 YYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPAC 417
Query: 316 RFDH 319
RFDH
Sbjct: 418 RFDH 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 163 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 222
Query: 307 GICKFGPTCRFDHP 320
G CKFG C+F+HP
Sbjct: 223 GSCKFGSDCKFNHP 236
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R SFN GLP+R D+ C +
Sbjct: 345 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 404
Query: 143 YMRTGSFLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 178
Y R G ++ S+ PT+S + + +R G
Sbjct: 405 YSRYGICKFGPACRFDHSIPPTFSPSSSQTVEARQVG 441
>gi|255644834|gb|ACU22918.1| unknown [Glycine max]
Length = 264
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 153/250 (61%), Gaps = 30/250 (12%)
Query: 165 SLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSR 224
S + ++ +RLQ SY+P +S SQG++P WN YMGN+ P P GSNL+Y
Sbjct: 44 STKNVVFIWTRLQ---SYVPPFLSSSQGVIPVQSWNNYMGNMNPAMPNGFLGSNLVYDYM 100
Query: 225 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 284
N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG+DCKFHHPKER++QS
Sbjct: 101 NLGESLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSL-- 153
Query: 285 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMN 344
I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P NYGL+ P +++LD+ L
Sbjct: 154 -INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPLT- 211
Query: 345 HQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKVDHPP-HS 403
+ +S ETSP S +Q+SDA + ++DSSK D +S
Sbjct: 212 -RGLSNVQPPETSPSKLSDKK--LQHSDAKAA--------------TEDSSKQDDTTLNS 254
Query: 404 VPNCSEPPHD 413
P +EP H+
Sbjct: 255 FPASAEPLHN 264
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREELPERNGQPD 94
GG A S P RP +P+C ++ TG C YGS+C+F+HP +Q LP R GQ
Sbjct: 108 GGQAINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSLINPLGLPVRPGQAV 167
Query: 95 CGYYLKTGTCKYGSTCKYHHPK----DRNGAGPVSFNILGLPMRQ 135
C YY G CK+G TCK+ HP G + N+L P+ +
Sbjct: 168 CSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPLTR 212
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK 138
G LP R QP+C Y++ TGTCKYGS CK+HHPK+R + N LGLP+R +
Sbjct: 109 GQAINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSLI--NPLGLPVRPGQA 166
Query: 139 SCPYYMRTG 147
C YY G
Sbjct: 167 VCSYYRIYG 175
>gi|297816042|ref|XP_002875904.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321742|gb|EFH52163.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 168/322 (52%), Gaps = 58/322 (18%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGA-----QYREELPERNGQPDCGY 97
YP RPG DC FY RTG C +GS+C+FNHP A Q A + +EE + G DC Y
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKIQIARDNKVREKEEDGGKLGLIDCKY 166
Query: 98 YLKTGTCKYGSTCKYHH--PKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGS------- 148
Y +TG CKYG TC+++H PK + P N LGLP+R E CPYYMR GS
Sbjct: 167 YFRTGGCKYGETCRFNHTLPKSCLASAP-ELNFLGLPIRPGEVECPYYMRNGSCKFGAEC 225
Query: 149 ---------FLPSSGLQYAG----SLPTWSLQRAPYLSS-------RLQGTQSYMPLIVS 188
+ L + G S+ T+S + A SS + GT ++P+++S
Sbjct: 226 KFNHPDPTTIGGTDSLSFHGNNGVSIGTFSPKSAFQASSTSWTSPRHVNGTSPFIPVMLS 285
Query: 189 PSQGI-VPAPGWNTYMGNI-----GPLSPTSIAGSNLIYSSRNQGDLGAGAQM-----HI 237
+ G+ P WN Y ++ G SP++ N +L A M H
Sbjct: 286 QTHGVPSQTPEWNGYQASVYSSERGLFSPSTTYLMN---------NLSAETSMLSQYRHQ 336
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 297
+ A + PERPDQPDC YYM TG CK+ +CK+HHPK R+ + + GLP RP Q
Sbjct: 337 MPA--EEFPERPDQPDCSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQ 394
Query: 298 AICSNYSMYGICKFGPTCRFDH 319
IC+ YS YGICKFGP CRFDH
Sbjct: 395 NICTYYSRYGICKFGPACRFDH 416
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
DC+YY TG CKYG C+F+H + ++A + LGLP RPG+ C Y G CKFG
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTLPKSCLASAPELNFLGLPIRPGEVECPYYMRNGSCKFG 222
Query: 313 PTCRFDHP 320
C+F+HP
Sbjct: 223 AECKFNHP 230
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
P RPG CS Y G CKFG +C+F+HP A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
>gi|22326848|ref|NP_568332.2| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|4689376|gb|AAD27875.1|AF138872_1 zinc finger protein 3 [Arabidopsis thaliana]
gi|9759138|dbj|BAB09623.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|332004923|gb|AED92306.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 368
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 193/397 (48%), Gaps = 86/397 (21%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+ A+W++ + + G YP R GEPDC +Y RTGLC +GS CRFNHP
Sbjct: 19 QNAMWQMNLGSDDTMG---VDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVI 75
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQD 136
A+ + E PER GQP+C +YLKTGTCK+G TCK+HHP+++ G G VS N+L P+R +
Sbjct: 76 ATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPN 135
Query: 137 EKSCPYYMRTG------------------SFLPS-------SGLQYAGSLPTWSLQRAPY 171
E C Y++R G + + S S LQ P++S R +
Sbjct: 136 EDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSF 195
Query: 172 LSS--RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL 229
+++ RLQ + S SQG + + G+++ GN PL ++ N+
Sbjct: 196 VANPPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALPRENV---------- 239
Query: 230 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 289
PERP QP+C++YM TG CK+G CKFHHP++R P
Sbjct: 240 ---------------FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR-------QTPPP 277
Query: 290 GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS 349
G+ +C YS YGICKFGP+C+FDHP + N + P S SSL AI+
Sbjct: 278 DCVLSSGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPS---SSLHQETAIT 334
Query: 350 -------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 378
+ S+E P + +P D V QH
Sbjct: 335 TELRNLLVSSSVEAKP---TSLPETTSAKDTIVDAQH 368
>gi|449487726|ref|XP_004157770.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 164/326 (50%), Gaps = 56/326 (17%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELP 87
++G +++ YP RP DC FY +TG C +GS C+FNHP ++ +Y ++
Sbjct: 125 RKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDST 184
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRT 146
+ +C +YL+TG CK+G+ C+Y+H + R P+ N LGLP+R DEK CPYYMRT
Sbjct: 185 GTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRT 244
Query: 147 GSFLPSSGLQYAGSLPTWSL--------------------QRAPYLSSR-LQGTQSYMPL 185
GS + ++ PT Q + S R L +++P
Sbjct: 245 GSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRVLNEATTFVPA 304
Query: 186 IVSPSQGIVPAPGWNTYMG-----NIGPLSP-----TSIAGSNLIYSSRNQGDLGAGAQM 235
++SPSQ WN Y IG L P SIA +YSS Q D
Sbjct: 305 MISPSQDQ----DWNGYQAPIYPSEIGVLPPPAYVVNSIAPETDLYSSHQQVD------- 353
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PERP QP+C Y++ TG CK+ + CK+HHPK R + + GLP RP
Sbjct: 354 --------EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRP 405
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPY 321
Q +C+ Y YGICKFGP+C+FDHP+
Sbjct: 406 DQNVCTYYRRYGICKFGPSCKFDHPF 431
>gi|307136126|gb|ADN33972.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 475
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 165/326 (50%), Gaps = 56/326 (17%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELP 87
++G +++ YP RP DC FY +TG C +GS C+FNHP ++ +Y ++
Sbjct: 127 RKGDWRGKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSA 186
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRT 146
+ +C +YL+TG CK+G+ C+Y+H + R P+ N LGLP+R DEK CPYYMRT
Sbjct: 187 GTANKTECKFYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIRPDEKECPYYMRT 246
Query: 147 GSFLPSSGLQYAGSLPTWSL--------------------QRAPYLSSR-LQGTQSYMPL 185
GS + ++ PT Q + S R L +++P
Sbjct: 247 GSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRVLNEATTFVPA 306
Query: 186 IVSPSQGIVPAPGWNTYMGNIGP-----LSP-----TSIAGSNLIYSSRNQGDLGAGAQM 235
++SPSQ WN Y I P L P +IA +YSS Q D
Sbjct: 307 MISPSQD----SEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQVD------- 355
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PERP QP+C Y++ TG CK+ + CK+HHPK R + + GLP RP
Sbjct: 356 --------EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRP 407
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPY 321
Q +C+ YS YGICKFGP+C+FDHP+
Sbjct: 408 DQNVCTYYSRYGICKFGPSCKFDHPF 433
>gi|326507710|dbj|BAJ86598.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518680|dbj|BAJ92501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 198/429 (46%), Gaps = 59/429 (13%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + +E A P RPGE +C++Y RTG CGYG CR+NHP A A
Sbjct: 28 LEESMWRLGLAGGEE----AAGEGLPERPGEANCVYYLRTGACGYGETCRYNHPRDRAAA 83
Query: 77 AQGA---QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
G E PER GQP C YY+K GTCK+GS CKY+HP++ PV N G P+
Sbjct: 84 FDGGIRTTRTVEYPERPGQPPCEYYMKNGTCKFGSNCKYNHPREGGSVQPVVLNSSGYPL 143
Query: 134 RQDEKSCPYYMRTGSFLPSSGLQY--------------------AGSLPTWSLQRAPYLS 173
R EK C YY++TG S ++ LP S P L+
Sbjct: 144 RLGEKECSYYIKTGHCKFGSTCKFHHPEGPELGVVSEPPNMYPPVQQLPVSSPLPYPPLA 203
Query: 174 SRLQGTQSYMPLIVSPSQ--------GIVPAPGWNTYMGNIGPLSPTS---IAGSNLIYS 222
S G S +P P ++P GWN YM + ++P + +Y
Sbjct: 204 SWQLGRPSVLPGSFFPGSYPPMMHPSAVMPMQGWNPYMSPMNQVAPAGGQQTVQAGPLYG 263
Query: 223 SRNQGDLGAGA-----------QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
+QG A A PERP QP+C +YM TGTCK+G+ CK+
Sbjct: 264 LSHQGPPSAVAYGSNYASLSSSTWPSSDKQEVVFPERPGQPECHHYMKTGTCKFGSTCKY 323
Query: 272 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 331
+HP+ + + PLGLP RPG C YS +G CKFGP C+FDHP ++Y S
Sbjct: 324 NHPQYLSTPRSNYMLSPLGLPIRPGAQPCLYYSQHGFCKFGPGCKFDHPLGA--LSYSPS 381
Query: 332 LPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNS 391
S+ D + + + SP +S P ++ D+ + Q +P +T +
Sbjct: 382 A--SSLGDMPIAPYPLSLPVAPMAPSPSSSGLRPEYILAKDSSANQPASP---GTTFGPA 436
Query: 392 DDSSKVDHP 400
SK+ P
Sbjct: 437 GQMSKIYAP 445
>gi|115435758|ref|NP_001042637.1| Os01g0258700 [Oryza sativa Japonica Group]
gi|62901411|sp|Q5NAW2.2|C3H6_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 6;
Short=OsC3H6; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 1
gi|56783964|dbj|BAD81401.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
gi|113532168|dbj|BAF04551.1| Os01g0258700 [Oryza sativa Japonica Group]
Length = 476
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 174/346 (50%), Gaps = 59/346 (17%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQPDCGY 97
P RPGE DC++Y RTG CG+G CR+NHP GA+ L PER GQP C Y
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQY 157
Y+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM+TG + ++
Sbjct: 117 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKF 176
Query: 158 ----------------------------AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVS 188
SL W + R P + S + G SY P+++S
Sbjct: 177 HHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPG--SYTPMMLS 234
Query: 189 PSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSA 240
G++P GW+ Y ++ P+ + A N+ +Y + G G + S+
Sbjct: 235 --SGMIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASS 291
Query: 241 SSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
+ Q+ PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP
Sbjct: 292 TGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLP 351
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 352 LRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 395
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 363
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 364 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 397
>gi|56783965|dbj|BAD81402.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
Length = 447
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 174/346 (50%), Gaps = 59/346 (17%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQPDCGY 97
P RPGE DC++Y RTG CG+G CR+NHP GA+ L PER GQP C Y
Sbjct: 28 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 87
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQY 157
Y+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM+TG + ++
Sbjct: 88 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKF 147
Query: 158 ----------------------------AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVS 188
SL W + R P + S + G SY P+++S
Sbjct: 148 HHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPG--SYTPMMLS 205
Query: 189 PSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSA 240
G++P GW+ Y ++ P+ + A N+ +Y + G G + S+
Sbjct: 206 --SGMIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASS 262
Query: 241 SSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
+ Q+ PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP
Sbjct: 263 TGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLP 322
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 323 LRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 366
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 275 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 334
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 335 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 368
>gi|215767117|dbj|BAG99345.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 464
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 174/346 (50%), Gaps = 59/346 (17%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQPDCGY 97
P RPGE DC++Y RTG CG+G CR+NHP GA+ L PER GQP C Y
Sbjct: 45 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 104
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQY 157
Y+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM+TG + ++
Sbjct: 105 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKF 164
Query: 158 ----------------------------AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVS 188
SL W + R P + S + G SY P+++S
Sbjct: 165 HHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPG--SYTPMMLS 222
Query: 189 PSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSA 240
G++P GW+ Y ++ P+ + A N+ +Y + G G + S+
Sbjct: 223 --SGMIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASS 279
Query: 241 SSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
+ Q+ PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP
Sbjct: 280 TGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLP 339
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 340 LRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 383
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 292 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 351
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 352 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 385
>gi|449469596|ref|XP_004152505.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 165/326 (50%), Gaps = 56/326 (17%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELP 87
++G +++ YP RP DC FY +TG C +GS C+FNHP ++ +Y ++
Sbjct: 125 RKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDST 184
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRT 146
+ +C +YL+TG CK+G+ C+Y+H + R P+ N LGLP+R DEK CPYYMRT
Sbjct: 185 GTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRT 244
Query: 147 GSFLPSSGLQYAGSLPTWSL--------------------QRAPYLSSR-LQGTQSYMPL 185
GS + ++ PT Q + S R L +++P
Sbjct: 245 GSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRVLNEATTFVPA 304
Query: 186 IVSPSQGIVPAPGWNTYMGNIGP-----LSPTSIAGSNL-----IYSSRNQGDLGAGAQM 235
++SPSQ WN Y I P L P + +N+ +YSS Q D
Sbjct: 305 MISPSQDQ----DWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVD------- 353
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PERP QP+C Y++ TG CK+ + CK+HHPK R + + GLP RP
Sbjct: 354 --------EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRP 405
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPY 321
Q +C+ Y YGICKFGP+C+FDHP+
Sbjct: 406 DQNVCTYYRRYGICKFGPSCKFDHPF 431
>gi|147818474|emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 200/411 (48%), Gaps = 54/411 (13%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M NR ++ N V + +++WRL G++ YP RPG DC++Y +TG
Sbjct: 90 MGPNRILRWNGVRSGRCRG-SKSMWRL---------GLSSRESYPERPGVADCVYYMKTG 139
Query: 61 LCGYGSNCRFNHPAYAAQGAQYRE---ELPERNGQP------DCGYYLKTGTCKYGSTCK 111
CG+GS CR+NHP + + R E PER G+P +C YYLKTG CK+G TCK
Sbjct: 140 FCGFGSRCRYNHPRDRSSVSTLRSGGGEYPERIGEPACQGEKECSYYLKTGQCKFGITCK 199
Query: 112 YHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPY 171
+HHP+ + P S + +Y S + QY G+ +W + R P
Sbjct: 200 FHHPQPAGTSLPAS-------------APTFYPTVQSPSVPTPTQYGGTSTSWRVPRPPV 246
Query: 172 L-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-----SPTSIAGSNLIYSSRN 225
L S +QG Y P++ P G+VP PGW+ Y + P+ PT AGS +
Sbjct: 247 LPGSYVQG--PYGPVLFPP--GVVPIPGWSPYSTPVSPVLSPGAQPTVGAGSVYGVTQLP 302
Query: 226 QGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
AG + S++ Q PERP Q +C+YY+ TG CK+G+ C++HHP+E
Sbjct: 303 STHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREW 362
Query: 278 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
+ + PLGLP RPG C+ Y G CKFG TC+FDHP N S S+
Sbjct: 363 VVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLG----NMRYSPSASSL 418
Query: 338 LDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTT 388
D + + S+ ++ S +S P+++ S S + P N+T+
Sbjct: 419 TDMPVAPYPVGSSLATLAPSFSSSDLRPDFISGSKKDSHSTRMPSSGNTTS 469
>gi|326504076|dbj|BAK02824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 191/404 (47%), Gaps = 61/404 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----A 74
+E ++WR+ + + G G P RP + DC++Y RTG CG+G CR+NHP
Sbjct: 28 LEGSMWRMGLAGDGGGEGDGAR--LPERPDQADCIYYLRTGACGFGDRCRYNHPRDRGGT 85
Query: 75 YAAQGAQYREEL--PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
GA+ L PER GQP C YY+KTGTCK+GS CKYHHPK PV N G P
Sbjct: 86 EFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFP 145
Query: 133 MRQDEKSCPYYMRTGSFLPSSGLQY----AGSLPT------------------------W 164
+R EK C YYM+TG S ++ G +P W
Sbjct: 146 LRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPLQSSTVSSPHPYAPLTNW 205
Query: 165 SLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS---PTSIAGSNLI 220
+ R P + S + G SY P+++S G++P GW+ Y ++ P++ + +
Sbjct: 206 QMGRPPVVPGSYMPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVASGGAQQTVQAGHM 261
Query: 221 YSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYMNTGTCKYGAD 268
Y + G G M S++ Q+ PERP QP+C+YYM TG CK+GA
Sbjct: 262 YGIGHHGSSSTIAYGGPYMPYSSSTIQSSNNQQEHGFPERPGQPECQYYMRTGDCKFGAT 321
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
CK+HHP++ + + P LP RPG CS Y+ G C++G C++DHP
Sbjct: 322 CKYHHPRDWSSPKSNYMFSPFCLPLRPGAQPCSYYAQNGYCRYGVACKYDHPMG----TL 377
Query: 329 GLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD 372
G S P + D + + + ++ S + P ++ D
Sbjct: 378 GYSSSPFPLSDVPIAPYPLGFSIATLAPSSSSPDLRPEYISAKD 421
>gi|297793917|ref|XP_002864843.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310678|gb|EFH41102.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 160/311 (51%), Gaps = 38/311 (12%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREELPERNGQPDCGYY 98
YP RP DC FY RTG C YGS+C+FNHP + + R+E E +C YY
Sbjct: 97 YPVRPDAEDCSFYMRTGSCKYGSSCKFNHPLRKKLQIGREKVRERDEDVENPKLMECKYY 156
Query: 99 LKTGTCKYGSTCKYHHPKDRN--GAGPVSFNILGLPMRQDEKSCPYYMRTGS-------- 148
+TG CKYG +C++ H K+ +GP N LGLP+R EK CP+YMR GS
Sbjct: 157 FRTGGCKYGESCRFSHMKEHTSLASGP-DLNFLGLPIRPGEKECPFYMRNGSCKFGSDCK 215
Query: 149 ----------------FLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQS--YMPLIVSPS 190
F ++G ++ P+ + + + + GT + ++P + +
Sbjct: 216 FNHPDPTAIGGVDSPLFRGNNGGPFSPKAPSQASSTSWSSTRHINGTGTAPFIPAMFPHN 275
Query: 191 QGIVP-APGWNTYMGNIG-PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 248
+G+ P A WN Y + P + +A S Y N + + + PER
Sbjct: 276 RGVSPQASEWNGYQASSAYPPERSVLAPS--TYPVNNSLAETSSFSQYQHQMPGEEFPER 333
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
PDQP+C YY+ TG CK+ CK+HHPK R+ + A + GLP RP Q++C++YS YGI
Sbjct: 334 PDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAPFSFNDKGLPLRPDQSMCTHYSRYGI 393
Query: 309 CKFGPTCRFDH 319
CKFGP CRFDH
Sbjct: 394 CKFGPACRFDH 404
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
E P +C+YY TG CKYG C+F H KE + ++ ++ LGLP RPG+ C Y
Sbjct: 146 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHTSLASGPDLNFLGLPIRPGEKECPFYMRN 205
Query: 307 GICKFGPTCRFDHP 320
G CKFG C+F+HP
Sbjct: 206 GSCKFGSDCKFNHP 219
>gi|357129792|ref|XP_003566545.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Brachypodium distachyon]
Length = 478
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 175/372 (47%), Gaps = 62/372 (16%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQP 93
A+ P RP E DC++Y RTG CG+G CR+NHP GA+ L PER GQP
Sbjct: 57 AARLPERPDEADCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVVLDYPERLGQP 116
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSS 153
C YY+KTGTCK+GS CKYHHPK PV N G P+R EK C YYM+TG S
Sbjct: 117 VCEYYMKTGTCKFGSNCKYHHPKQDGSVLPVMLNNSGFPLRPGEKECSYYMKTGQCKFGS 176
Query: 154 GLQY---------------------------AGSLPTWSLQRAPYL-SSRLQGTQSYMPL 185
++ SL W + R P + S + G SY P+
Sbjct: 177 TCKFHHPEFGGFPVTPGIYPPLQSSVPSPHPYASLANWQMGRPPVVPGSYMPG--SYAPM 234
Query: 186 IVSPSQGIVPAPGWNTYMGNIGPLS---PTSIAGSNLIYSSRNQGDLGAGA--------- 233
++S G++P GW ++ + P++ P + +Y + G A
Sbjct: 235 MLS--SGMIPLQGW-SFRAAVNPVASGGPQQTVQAGPVYGIGHHGSSSTIAYGGPYMPYS 291
Query: 234 ---QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 290
S PERP QP+C+YYM TG CK+GA CK+HHP++ + + P
Sbjct: 292 SSTIQSSHSQQEHGFPERPGQPECQYYMRTGDCKFGATCKYHHPRDWSSPKSNYVFSPFC 351
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQ---A 347
LP RPG CS Y+ G C++G C++DHP G S PL + D + + +
Sbjct: 352 LPLRPGAQPCSYYAQNGYCRYGVACKYDHPMG----TLGYSSSPLPLSDMPIAPYPLGFS 407
Query: 348 ISATHSIETSPD 359
I+ +SPD
Sbjct: 408 IATLAPSSSSPD 419
>gi|242056895|ref|XP_002457593.1| hypothetical protein SORBIDRAFT_03g009930 [Sorghum bicolor]
gi|241929568|gb|EES02713.1| hypothetical protein SORBIDRAFT_03g009930 [Sorghum bicolor]
Length = 481
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 175/354 (49%), Gaps = 75/354 (21%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA ++ PER GQP C
Sbjct: 69 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QDFPERQGQPVC 126
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGL 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG S
Sbjct: 127 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTC 186
Query: 156 QY-------------------AGSLPT-------WSLQRAPYL-SSRLQGTQSYMPLIVS 188
++ + S+P+ W + R+P + S + G SY P+++
Sbjct: 187 KFHHPEFGGIPVTPGIYPPLQSASVPSPHTYAPNWQMGRSPAVPGSYIPG--SYTPMML- 243
Query: 189 PSQGIVPAPGWNTYMGNIGPL---------------------SPTSIA--GSNLIYSSRN 225
S G+VP GW+ Y ++ P+ S T+IA G+ L YSS +
Sbjct: 244 -SSGMVPLQGWSPYPASVTPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-S 301
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
G Q H PERP QP+C+Y+M TG CK+G CK++HP++ A +
Sbjct: 302 TGQSSNNHQEH-------GFPERPGQPECQYFMRTGDCKFGNTCKYNHPRDWSAPKSNYM 354
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILD 339
L LP RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 355 FSHLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSSSALPLSDMS 406
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 301
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 68 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVCE 127
Query: 302 NYSMYGICKFGPTCRFDHP 320
Y G CKFG C++ HP
Sbjct: 128 YYLKTGTCKFGSNCKYHHP 146
>gi|224028495|gb|ACN33323.1| unknown [Zea mays]
gi|238011118|gb|ACR36594.1| unknown [Zea mays]
gi|407232628|gb|AFT82656.1| C3H28 transcription factor, partial [Zea mays subsp. mays]
gi|413947003|gb|AFW79652.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
1 [Zea mays]
gi|413947004|gb|AFW79653.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
2 [Zea mays]
gi|413947005|gb|AFW79654.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
3 [Zea mays]
Length = 471
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 164/334 (49%), Gaps = 73/334 (21%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA ++ PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QDFPERQGQPVC 116
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGL 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG S
Sbjct: 117 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRLGEKECSYYMKTGQCKFGSTC 176
Query: 156 QY----AGSLPT----------------------WSLQRAPYL-SSRLQGTQSYMPLIVS 188
++ G +P W + R+P + S + G SY P+++
Sbjct: 177 KFHHPEFGGIPVTPGIYPPLQSPSVPSPHTYAPNWQMGRSPAVPGSYIPG--SYTPMMI- 233
Query: 189 PSQGIVPAPGWNTYMGNIGPL---------------------SPTSIA--GSNLIYSSRN 225
S G+VP GW+ Y ++ P+ S T+IA G+ L YSS +
Sbjct: 234 -SSGMVPLQGWSPYPASVNPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-S 291
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
G Q H PERP QP+C+YYM TG CK+G CK++HP++ +
Sbjct: 292 AGQSSNNHQEH-------GFPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKSNYM 344
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
L LP RPG C+ Y+ G C++G C++DH
Sbjct: 345 FSHLCLPLRPGAQPCAYYAQNGYCRYGVACKYDH 378
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 301
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVCE 117
Query: 302 NYSMYGICKFGPTCRFDHP 320
Y G CKFG C++ HP
Sbjct: 118 YYLKTGTCKFGSNCKYHHP 136
>gi|226504738|ref|NP_001150480.1| LOC100284111 [Zea mays]
gi|195639552|gb|ACG39244.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
Length = 471
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 163/333 (48%), Gaps = 71/333 (21%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQY--------REELPERNGQPDCG 96
P RPGE DC +Y RTG CG+G CR+NHP G ++ ++ PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRG-GTEFGGGTKNGAAQDFPERQGQPVCE 117
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQ 156
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG S +
Sbjct: 118 YYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRLGEKECSYYMKTGQCKFGSTCK 177
Query: 157 Y----AGSLPT----------------------WSLQRAPYL-SSRLQGTQSYMPLIVSP 189
+ G +P W + R+P + S + G SY P+++
Sbjct: 178 FHHPEFGGIPVTPGIYPPLQSPSVPSPHTYAPNWQMGRSPAVPGSYIPG--SYTPMMI-- 233
Query: 190 SQGIVPAPGWNTYMGNIGPL---------------------SPTSIA--GSNLIYSSRNQ 226
S G+VP GW+ Y ++ P+ S T+IA G+ L YSS +
Sbjct: 234 SSGMVPLQGWSPYPASVNPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-SA 292
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
G Q H PERP QP+C+YYM TG CK+G CK++HP++
Sbjct: 293 GQSSNNHQEH-------GFPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKTNYMF 345
Query: 287 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
L LP RPG C+ Y+ G C++G C++DH
Sbjct: 346 SHLCLPLRPGAQPCAYYAQNGYCRYGVACKYDH 378
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 301
LPERP + DC YY+ TG C +G C+++HP++R N P R GQ +C
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGTKNGAAQDFPERQGQPVCE 117
Query: 302 NYSMYGICKFGPTCRFDHP 320
Y G CKFG C++ HP
Sbjct: 118 YYLKTGTCKFGSNCKYHHP 136
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +G+ C++NHP ++ Y LP R G C YY
Sbjct: 304 FPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKTNYMFSHLCLPLRPGAQPCAYYA 363
Query: 100 KTGTCKYGSTCKYHH 114
+ G C+YG CKY H
Sbjct: 364 QNGYCRYGVACKYDH 378
>gi|225452232|ref|XP_002268612.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera]
gi|296081325|emb|CBI17707.3| unnamed protein product [Vitis vinifera]
Length = 417
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 167/354 (47%), Gaps = 60/354 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREELPE-RNGQPDCGYYLKT 101
YP RP DC +Y RTG C +G NC+FNHP Q + RE E + + +C YYL
Sbjct: 56 YPLRPYAQDCPYYVRTGSCKFGLNCKFNHPVTRTGQVGKERENEGEGLSEKIECKYYLTG 115
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFL----------- 150
G CKYG++C+Y H K+ N + +N LGLPMR EK CPYYMRTGS
Sbjct: 116 GGCKYGNSCRYSHSKETNELATLEYNFLGLPMRVGEKECPYYMRTGSCGYGANCRFHHPD 175
Query: 151 ---------------------------PSSGLQYAG----SLPTWSL-----QRAPYLSS 174
S+ L +G S+P+WS +R PY +
Sbjct: 176 PTSVGGSEPNGNGESVGGFDSLGNHNGESTILNLSGASQPSMPSWSSHMLSNKRVPYSDN 235
Query: 175 RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQ 234
R SY+P + S +QGI P N Y I S L + N+ +
Sbjct: 236 R----SSYVPAMHSVAQGIHPNLDLNGYQAPIHSQGMPRHLHSGL---TLNKLMKKSDVS 288
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR 294
H + PERP +P+C Y+M TG CKY + C++HHPK R+ + GLP R
Sbjct: 289 QHYEQTQVEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLR 348
Query: 295 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 348
PG+ IC +Y YGICK+G C FDHP P + S P S LD L ++ A
Sbjct: 349 PGKKICWHYESYGICKYGRACLFDHP----PNHTPSSFPVGSKLDPPLGHNSAT 398
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPD 94
Q +P RPG+P+C ++ +TG C Y S CR++HP G A + LP R G+
Sbjct: 294 TQVEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKI 353
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
C +Y G CKYG C + HP + P SF +
Sbjct: 354 CWHYESYGICKYGRACLFDHPPNHT---PSSFPV 384
>gi|226508854|ref|NP_001150919.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
gi|195642960|gb|ACG40948.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
gi|414876867|tpg|DAA53998.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 1 [Zea mays]
gi|414876868|tpg|DAA53999.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 2 [Zea mays]
gi|414876869|tpg|DAA54000.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 3 [Zea mays]
Length = 471
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 169/353 (47%), Gaps = 75/353 (21%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA + PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QYFPERQGQPVC 116
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGL 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG S
Sbjct: 117 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTC 176
Query: 156 QY----AGSLPT----------------------WSLQRAPYL-SSRLQGTQSYMPLIVS 188
++ G +P W + R+P + S + G SY P+++
Sbjct: 177 KFHHPEFGGIPVTPGIYPALQSASVPSPLTYASNWQMGRSPAVPGSYIAG--SYTPMVL- 233
Query: 189 PSQGIVPAPGWNTYMGNI--------------GPL-------SPTSIA--GSNLIYSSRN 225
G+VP GW+ Y + GPL S T+IA G+ L YSS
Sbjct: 234 -PSGMVPLQGWSPYPAPVNHVASGGAQQTIQAGPLYGIGHHGSSTAIAYGGTYLPYSSST 292
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
G + H PERP QP+C+YYM TG CK+G CK++HP++ +
Sbjct: 293 ----GQSSNNH----QEHGFPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYM 344
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
L LP RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 345 FSHLCLPLRPGAQPCTYYAQNGYCRYGIACKYDHPMGT--LGYSSSALPLSDM 395
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +G+ C++NHP ++ + Y LP R G C YY
Sbjct: 304 FPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYA 363
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G + + +P+
Sbjct: 364 QNGYCRYGIACKYDHPMGTLGYSSSALPLSDMPI 397
>gi|356546492|ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 491
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 174/371 (46%), Gaps = 73/371 (19%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
++ +EE +W+L + GGG + S YP RP E DC +Y RTG CG+GS CRFNHP
Sbjct: 23 EAQTGLEEPVWQLGM-----GGGAGEES-YPQRPDEVDCTYYLRTGFCGFGSRCRFNHPR 76
Query: 74 --AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG----PVSFN 127
A A + E PER GQP C Y+++T TCK+GS+CKYHHP+ G PVS N
Sbjct: 77 DRAVVAGAERTAGEHPERVGQPVCQYFMRTRTCKFGSSCKYHHPRQAGAGGAAATPVSLN 136
Query: 128 ILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTW----------------------- 164
G P+RQ EK C YY++TG + ++ +P
Sbjct: 137 YYGYPLRQGEKECSYYVKTGQCKFGATCKFHHPVPAGIQIPPSPFAPVSPLPVPVPSPLY 196
Query: 165 -SLQRAPYLSSRLQGT--------------QSYMPLIVSPSQGIVPAPGWNTYM----GN 205
++Q P SS+ G Y P+++SP+ +VP GW Y G
Sbjct: 197 STMQPPPGPSSQQIGVLVARPPMLPGSLVQSPYGPVVLSPA--MVPISGWGPYQASASGA 254
Query: 206 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSA-----------SSQNLPERPDQPDC 254
+ P S GS +Y A + Q PER +QP+
Sbjct: 255 VLPSGTPSNVGSAQLYGITQLPSPAAAYPGPYPPSGSPVGPPSSSQKEQAFPERSNQPEY 314
Query: 255 RYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMYGIC 309
+YY+ TG K+G +++ P + ++ + P GLP RPG C++Y+ +G+C
Sbjct: 315 QYYLKTGEVKFGPSYRYNPPPDMSVPDMSTPKANVILSPAGLPLRPGAPACTHYAQHGVC 374
Query: 310 KFGPTCRFDHP 320
KFG C+FDHP
Sbjct: 375 KFGSACKFDHP 385
>gi|356500274|ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 339
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 174/329 (52%), Gaps = 71/329 (21%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++W L + GGV YP RPG P+C++Y RTG+CGYG CRFNHP A
Sbjct: 27 LEESMWHLTL------GGVES---YPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAV 77
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPM 133
A + + PER G+P C YYLKTGTCK+G++CK+HHPK NG G +S NI G P+
Sbjct: 78 AAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLSQAPLNIYGYPL 135
Query: 134 RQDEKSCPYYMRT-----------------GSFLPSSG---------------LQYAGSL 161
R EK C YY++T G+ LP+S QY G+
Sbjct: 136 RLGEKECSYYLKTGQCKFGISCKFHHPQPAGTSLPTSAPQFYQQVQSPTVPLPEQYGGAS 195
Query: 162 PTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP-------- 211
+ + R P L S +QG +Y P+++SP G+V PGW+ Y + P LSP
Sbjct: 196 TSLRVARPPVLPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVLSPGTQPAVGA 251
Query: 212 TSIAGSNLIYS-----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 266
TS+ G + S +R L + S + PERP +P+C+YY+ TG CK+G
Sbjct: 252 TSLYGVTQLSSPTSAFARPYTPLSSTTGPSGSSLKDRFFPERPGEPECQYYLRTGDCKFG 311
Query: 267 ADCKFHHPKERIAQSAASNIGPLGLPSRP 295
C++HHP++ I A + P+GLP RP
Sbjct: 312 LACRYHHPRDHI---VAPLLSPVGLPLRP 337
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R G+ CS Y
Sbjct: 86 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRLGEKECSYY 145
Query: 304 SMYGICKFGPTCRFDHP 320
G CKFG +C+F HP
Sbjct: 146 LKTGQCKFGISCKFHHP 162
>gi|356557823|ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 481
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 172/361 (47%), Gaps = 65/361 (18%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
++ +EE +W+L + GG + S YP RP E DC +Y RTG CG+GS CRFNHP
Sbjct: 23 EAQTGLEEPMWQLGM------GGAGEES-YPQRPDEVDCTYYLRTGFCGFGSRCRFNHPR 75
Query: 74 --AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG--AGPVSFNIL 129
A A + E PER GQP C YY++T TCK+GS+CKYHHP+ G A P+S +
Sbjct: 76 DRAAVAGAERTTGEYPERVGQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYY 135
Query: 130 GLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTW------------------------S 165
G P+R EK C YY++TG + ++ +P +
Sbjct: 136 GYPLRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQIPAPSPVAPSPLPVPVPSPLYST 195
Query: 166 LQRAPYLSSRLQGT--------------QSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLS 210
+Q P SS+ G Y P+++SP+ +VP GW Y +G + P
Sbjct: 196 MQPPPGPSSQQIGVLVARPPMLPGSLVQSPYGPVVLSPA--MVPISGWGPYQVGAVHPSG 253
Query: 211 PTSIAGSNLIYSSRNQGDLGAG-----------AQMHILSASSQNLPERPDQPDCRYYMN 259
S GS +Y A S Q PER +QP+ +YY
Sbjct: 254 TPSNVGSPQLYGITQLPSPVAAYPGPYQPSGSPVGPSSSSQKEQAFPERSNQPEYQYYPK 313
Query: 260 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA-ICSNYSMYGICKFGPTCRFD 318
TG K+G +++ P + A A + P GLP RPG A C +Y+ +G+CKFG C+FD
Sbjct: 314 TGEVKFGPSYRYNPPPDMSAPKANVILSPAGLPLRPGAAPACIHYAQHGVCKFGSACKFD 373
Query: 319 H 319
H
Sbjct: 374 H 374
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 234 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
Q+ + A ++ P+RPD+ DC YY+ TG C +G+ C+F+HP++R A + A P
Sbjct: 34 QLGMGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVAGAERTT-GEYPE 92
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDHP--------------YAGYPINYG 329
R GQ +C Y CKFG +C++ HP Y GYP+ G
Sbjct: 93 RVGQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYYGYPLRPG 142
>gi|357447361|ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355483004|gb|AES64207.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 482
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 177/373 (47%), Gaps = 69/373 (18%)
Query: 16 SADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA- 74
S +EE +W+L + + YP RP E DC +Y RTG CG+GS CRFNHP
Sbjct: 21 SQTGLEEPMWQLGLGSGG-----SGEDSYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRD 75
Query: 75 -YAAQGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG--AGPVSFNIL 129
A GA R E PER GQP C YY++T +CK+G++CKYHHPK A PVS N
Sbjct: 76 RAAVIGAASRTVGEYPERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYY 135
Query: 130 GLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTW------------------------- 164
G P+R EK C Y+++TG + ++ +P
Sbjct: 136 GYPLRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPVPPVSSLHVPVPSPLYP 195
Query: 165 --------SLQRAPYLSSR---LQGT---QSYMPLIVSPSQGIVPAPGWNTYMGN-IGPL 209
S Q+ L +R L G+ Y P+++SP+ +VP GW Y P+
Sbjct: 196 TVQTPSGPSSQQIGVLVARPPLLHGSFVQSPYGPMVLSPT--MVPFSGWGPYQATATSPV 253
Query: 210 ----SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS----------QNLPERPDQPDCR 255
SP ++ + L ++ A + LS SS Q+ P P+QP+
Sbjct: 254 LPSGSPANVGSTQLYGITQLPSPGNAYTGPYQLSGSSVGPSSRNQNEQSFPASPNQPEYH 313
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 315
YY + ++H P + A + + P GLP RPG A+C++Y+ GICKFGP C
Sbjct: 314 YYSKPEELPFAPSYRYHKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPAC 373
Query: 316 RFDHPYAGYPINY 328
+FDHP A P++Y
Sbjct: 374 KFDHPIA--PLSY 384
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
P+RPD+ DC YY+ TG C +G+ C+F+HP++R A A++ P R GQ +C Y
Sbjct: 45 PQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVIGAASRTVGEYPERVGQPVCQYYMR 104
Query: 306 YGICKFGPTCRFDHP--------------YAGYPINYG 329
CKFG +C++ HP Y GYP+ G
Sbjct: 105 TRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPG 142
>gi|357477239|ref|XP_003608905.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509960|gb|AES91102.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 307
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 145/276 (52%), Gaps = 35/276 (12%)
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQD 136
+ + REE E GQ +C YY ++G CK+G CKY+H R P+S N LGLP+R
Sbjct: 6 EKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNH--SRGFTAPISELNFLGLPIRLG 63
Query: 137 EKSCPYYMRTGSFL-------------------PSSGLQYAGSLPTWSLQRAPY--LSSR 175
E+ CPYYMRTGS P SG GS+ + + P SSR
Sbjct: 64 ERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSR 123
Query: 176 LQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLSPTSIAGSNLIYSSR---NQGDLGA 231
+ PL+ +P+QG+ P WN Y +P ++ + SS N +
Sbjct: 124 KLNETPFAPLMPTPTQGLAPQTSDWNGYQ------APAYLSERIMHPSSTYVMNNPTIDT 177
Query: 232 GAQMH-ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 290
MH + PERP +P+C +++ TG CK+ ++CKFHHPK R+A+ N+ G
Sbjct: 178 NVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKG 237
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
LP RP Q++CS+YS YGICKFGP CRFDHP + P+
Sbjct: 238 LPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPL 273
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYL 99
+P RPGEP+C F+ +TG C + SNC+F+HP + LP R Q C +Y
Sbjct: 192 FPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYS 251
Query: 100 KTGTCKYGSTCKYHHPK 116
+ G CK+G C++ HP+
Sbjct: 252 RYGICKFGPACRFDHPE 268
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P R GE +C +Y RTG C +GSNCRFNHP
Sbjct: 59 PIRLGERECPYYMRTGSCKFGSNCRFNHP 87
>gi|356554798|ref|XP_003545729.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Glycine max]
Length = 507
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 153/328 (46%), Gaps = 66/328 (20%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE 88
I D +E V + P RPGEPDC ++ +T C +GS C+FNHP +++ A LPE
Sbjct: 179 IPDWKEVPNVVTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSSGLPE 238
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKD------------------------------- 117
R +P C +Y+KTG C+YG+ CK+HHPKD
Sbjct: 239 RPSEPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNSMMGGATGDTQP 298
Query: 118 -RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRL 176
++ P N GLP+R E CP+YM+TGS +Y S R
Sbjct: 299 IKSLISPSLQNSKGLPVRLGEVDCPFYMKTGS------CKYGVSCRYNHPDR-------- 344
Query: 177 QGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH 236
+ P I I+P+ N NIG L+P +++ + +G ++
Sbjct: 345 ---NAINPPIAGLGASILPSSAANL---NIGLLNP-AVSAYQAFEPRLSNPMVGIAETIY 397
Query: 237 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER----IAQSAASNIGPLGLP 292
P+RP Q +C +YM TG CK+G CK+HHP +R +++ A + P GLP
Sbjct: 398 ---------PQRPGQIECDFYMKTGVCKFGERCKYHHPIDRSALSLSKQATVKLTPAGLP 448
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHP 320
R G IC Y G CKFG TC+FDHP
Sbjct: 449 RREGDVICPYYLKTGTCKFGATCKFDHP 476
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 139/326 (42%), Gaps = 90/326 (27%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----------AQYREELPERNGQP 93
YP RPGE DC Y T C +G +C+F+HP + +G E PER G+P
Sbjct: 142 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPDWKEVPNVVTSETPPERPGEP 201
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSS 153
DC Y+LKT CK+GS CK++HPK + VS GLP R E C +YM+TG +
Sbjct: 202 DCPYFLKTQRCKFGSKCKFNHPKVSSENADVS---SGLPERPSEPPCAFYMKTGKCRYGT 258
Query: 154 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 213
++ +Q + LS + TQ+ N+ MG G T
Sbjct: 259 ACKFHHP-KDIQIQLSDDLSQNVAQTQT------------------NSMMG--GATGDTQ 297
Query: 214 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
S + S +N S+ LP R + DC +YM TG+CKYG C+++H
Sbjct: 298 PIKSLISPSLQN----------------SKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNH 341
Query: 274 PKER------------IAQSAASNIGPLGL---------------------------PSR 294
P I S+A+N+ +GL P R
Sbjct: 342 PDRNAINPPIAGLGASILPSSAANLN-IGLLNPAVSAYQAFEPRLSNPMVGIAETIYPQR 400
Query: 295 PGQAICSNYSMYGICKFGPTCRFDHP 320
PGQ C Y G+CKFG C++ HP
Sbjct: 401 PGQIECDFYMKTGVCKFGERCKYHHP 426
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 102/258 (39%), Gaps = 77/258 (29%)
Query: 127 NILGLPMRQDEKSCPYYM--RTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMP 184
N+ P R EK C +YM RT F S + P W
Sbjct: 138 NMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDH----PVWV------------------- 174
Query: 185 LIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS-NLIYSSRNQG-DLGAGAQMHILSASS 242
P GI P W + +P G + Y + Q G+ + + SS
Sbjct: 175 ----PEGGI---PDWKEVPNVVTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSS 227
Query: 243 QN------LPERPDQPDCRYYMNTGTCKYGADCKFHHPK-----------ERIAQS---- 281
+N LPERP +P C +YM TG C+YG CKFHHPK + +AQ+
Sbjct: 228 ENADVSSGLPERPSEPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNS 287
Query: 282 ----AASNIGPL------------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325
A + P+ GLP R G+ C Y G CK+G +CR++HP
Sbjct: 288 MMGGATGDTQPIKSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRN-A 346
Query: 326 INYGLSLPPLSILDSSLM 343
IN PP++ L +S++
Sbjct: 347 IN-----PPIAGLGASIL 359
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 239 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHH---------PKERIAQSAASNIGP 288
SAS+ + P+RP + DC +YM T TCK+G CKF H P + + ++ P
Sbjct: 135 SASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPDWKEVPNVVTSETP 194
Query: 289 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ C + CKFG C+F+HP
Sbjct: 195 ---PERPGEPDCPYFLKTQRCKFGSKCKFNHP 223
>gi|224133812|ref|XP_002321667.1| predicted protein [Populus trichocarpa]
gi|222868663|gb|EEF05794.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 149/304 (49%), Gaps = 49/304 (16%)
Query: 58 RTGLCGYGSNCRFNHPAY-----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
+TG C +G NC+FNHP + + REE E+ GQ +C YYL+TG CKYG C++
Sbjct: 2 KTGTCKFGVNCKFNHPVRRKNQAVKENVKEREEATEKPGQTECKYYLRTGGCKYGKACRF 61
Query: 113 HHPKDRNGAGP---------VSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQY------ 157
+H +++ + P + N LGLP+R EK C +YMR GS + +Y
Sbjct: 62 NHTREKTFSVPPLKTPMPSILELNFLGLPIRPGEKQCEFYMRNGSCKYGATCKYNHPDPM 121
Query: 158 ---------------AGSLPTWSLQRAPYLSSR--LQGTQSYMPLIVSPSQGIVPAPGWN 200
SLP S SS L ++P + SP++ + WN
Sbjct: 122 AVGGSDLTSAFVNGGTTSLPAPSPSSVGSWSSPRALNDPTPFVPYVFSPTRLPSQSSEWN 181
Query: 201 TYMGNIGPLS-----PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
Y G + P P S A SN + ++ A Q + PERP Q C
Sbjct: 182 GYQGTLYPPERSLHPPPSYAMSN----PATESNVYAPQQQQTVV---DEFPERPGQQLCS 234
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 315
Y+M G CK+ ++CK+HHPK RI +S + + GLP RP Q ICS YS YGICKFGP C
Sbjct: 235 YFMKFGDCKFKSNCKYHHPKNRIPKSPSLTLSDKGLPLRPDQIICSYYSRYGICKFGPAC 294
Query: 316 RFDH 319
+FDH
Sbjct: 295 KFDH 298
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS--------AASNIGPLGLPSRPGQA 298
E+P Q +C+YY+ TG CKYG C+F+H +E+ + + LGLP RPG+
Sbjct: 37 EKPGQTECKYYLRTGGCKYGKACRFNHTREKTFSVPPLKTPMPSILELNFLGLPIRPGEK 96
Query: 299 ICSNYSMYGICKFGPTCRFDHP 320
C Y G CK+G TC+++HP
Sbjct: 97 QCEFYMRNGSCKYGATCKYNHP 118
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 258 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS-RPGQAICSNYSMYGICKFGPTCR 316
M TGTCK+G +CKF+HP R Q+ N+ + +PGQ C Y G CK+G CR
Sbjct: 1 MKTGTCKFGVNCKFNHPVRRKNQAVKENVKEREEATEKPGQTECKYYLRTGGCKYGKACR 60
Query: 317 FDHPYAGYPINYGLSLPPL-----SILDSSLM 343
F+H S+PPL SIL+ + +
Sbjct: 61 FNHTREK-----TFSVPPLKTPMPSILELNFL 87
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYL 99
+P RPG+ C ++ + G C + SNC+++HP + + LP R Q C YY
Sbjct: 224 FPERPGQQLCSYFMKFGDCKFKSNCKYHHPKNRIPKSPSLTLSDKGLPLRPDQIICSYYS 283
Query: 100 KTGTCKYGSTCKYHH 114
+ G CK+G CK+ H
Sbjct: 284 RYGICKFGPACKFDH 298
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
P RPGE C FY R G C YG+ C++NHP A G
Sbjct: 90 PIRPGEKQCEFYMRNGSCKYGATCKYNHPDPMAVGG 125
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQD---EKSCPYYMRTG 147
+KTGTCK+G CK++HP R V N+ + + C YY+RTG
Sbjct: 1 MKTGTCKFGVNCKFNHPVRRKNQA-VKENVKEREEATEKPGQTECKYYLRTG 51
>gi|356523523|ref|XP_003530387.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Glycine max]
Length = 508
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 151/329 (45%), Gaps = 67/329 (20%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE 88
I D +E V +P P RPGEPDC ++ +T C +GS C+FNHP +++ A LPE
Sbjct: 178 IPDWKEVPIVTSETP-PERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSSGLPE 236
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKD------------------------------- 117
R +P C +Y+KTG C+YG+ CK+HHPKD
Sbjct: 237 RPSEPPCAFYMKTGKCRYGAACKFHHPKDIQIQLSNDSSQTVAQTQTNSIMGWATGDTPP 296
Query: 118 -RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRL 176
++ P N GLP+R E CP+YM+TGS +Y
Sbjct: 297 IQSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVTCRY-----------------NH 339
Query: 177 QGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP-TSIAGSNLIYSSRNQGDLGAGAQM 235
+ P I I P+ N NIG L+P S+ + S +G +
Sbjct: 340 PDRNAINPPIAGLGASIFPSSAANL---NIGLLNPAVSVYQAFEPRLSNPMSQVGIADTI 396
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER----IAQSAASNIGPLGL 291
+ P+RP Q +C +YM TG CK+G CK+HHP +R +++ A + P GL
Sbjct: 397 Y---------PQRPGQIECDFYMKTGECKFGERCKYHHPIDRSAPSLSKQATVKLTPAGL 447
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P R G IC Y G CKFG TC+FDHP
Sbjct: 448 PRREGAVICPYYLKTGTCKFGATCKFDHP 476
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 139/327 (42%), Gaps = 91/327 (27%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA---------QYREELPERNGQPD 94
YP RPGE DC Y T C +G +C+F+HP + +G E PER G+PD
Sbjct: 141 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPFWVPEGGIPDWKEVPIVTSETPPERPGEPD 200
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSG 154
C Y+LKT CK+GS CK++HPK + VS GLP R E C +YM+TG +
Sbjct: 201 CPYFLKTQRCKFGSKCKFNHPKVSSENADVS---SGLPERPSEPPCAFYMKTGKCRYGAA 257
Query: 155 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 214
++ +Q + S + TQ+ + GW T G+ P+
Sbjct: 258 CKFHHPKDI-QIQLSNDSSQTVAQTQTNSIM------------GWAT--GDTPPI----- 297
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
+LI S +S+ LP R + DC +YM TG+CKYG C+++HP
Sbjct: 298 --QSLISPSLQ---------------NSKGLPVRLGEVDCPFYMKTGSCKYGVTCRYNHP 340
Query: 275 KER------------IAQSAASNIGPLGL-----------------------------PS 293
I S+A+N+ +GL P
Sbjct: 341 DRNAINPPIAGLGASIFPSSAANLN-IGLLNPAVSVYQAFEPRLSNPMSQVGIADTIYPQ 399
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDHP 320
RPGQ C Y G CKFG C++ HP
Sbjct: 400 RPGQIECDFYMKTGECKFGERCKYHHP 426
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 239 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL------ 291
SAS+ + P+RP + DC +YM T TCK+G CKF HP + + + + +
Sbjct: 134 SASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPF-WVPEGGIPDWKEVPIVTSETP 192
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ C + CKFG C+F+HP
Sbjct: 193 PERPGEPDCPYFLKTQRCKFGSKCKFNHP 221
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
P RPG+ C++Y + CKFG +C+FDHP+
Sbjct: 142 PQRPGEKDCAHYMLTRTCKFGDSCKFDHPF 171
>gi|297834072|ref|XP_002884918.1| enhancer of ag-4 1 [Arabidopsis lyrata subsp. lyrata]
gi|297330758|gb|EFH61177.1| enhancer of ag-4 1 [Arabidopsis lyrata subsp. lyrata]
Length = 519
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 155/314 (49%), Gaps = 73/314 (23%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 219 YPERPGEPDCPYYIKTQRCKYGSRCKFNHPREEAAVSVETQDALPERPSEPMCTFYMKTG 278
Query: 103 TCKYGSTCKYHHPKD--------RNGAGP-------------VSF------NILGLPMRQ 135
CK+G TCK+HHPKD NG+ V+F N GLP+R
Sbjct: 279 KCKFGLTCKFHHPKDIQVPSSSQDNGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRP 338
Query: 136 DEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP 195
E CP+Y++TGS +Y + +R ++ Q T L+ S
Sbjct: 339 GEVDCPFYLKTGS------CKYGATCRYNHPERTAFIP---QATGINYSLVSS------- 382
Query: 196 APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
NT N+G ++P + Y + Q LGA LSA+ P+RP Q +C
Sbjct: 383 ----NTANLNLGMVTP-----ATSFYQTLTQPTLGA------LSAT---YPQRPGQSECD 424
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAASN---------IGPLGLPSRPGQAICSNYSMY 306
YYM TG CK+G C+FHHP +R+ SA SN + G P R G C Y
Sbjct: 425 YYMKTGECKFGERCRFHHPADRL--SATSNQASQQPNVKLSLAGYPRREGALNCPYYMKT 482
Query: 307 GICKFGPTCRFDHP 320
G CK+G TC+FDHP
Sbjct: 483 GTCKYGATCKFDHP 496
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 217 EEYPERPGEPDCPYYIKTQRCKYGSRCKFNHPREEAAVSVETQD---ALPERPSEPMCTF 273
Query: 303 YSMYGICKFGPTCRFDHP 320
Y G CKFG TC+F HP
Sbjct: 274 YMKTGKCKFGLTCKFHHP 291
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL---P 87
A ++ YP RPG+ +C +Y +TG C +G CRF+HPA A+Q + L P
Sbjct: 409 ALSATYPQRPGQSECDYYMKTGECKFGERCRFHHPADRLSATSNQASQQPNVKLSLAGYP 468
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 469 RREGALNCPYYMKTGTCKYGATCKFDHP 496
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 300
P+R + DC +YM T TCK+G CKF H P+ I + + P P RPG+ C
Sbjct: 169 PQRAGEKDCTHYMQTRTCKFGDSCKFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 228
Query: 301 SNYSMYGICKFGPTCRFDHP 320
Y CK+G C+F+HP
Sbjct: 229 PYYIKTQRCKYGSRCKFNHP 248
>gi|22331028|ref|NP_187874.2| zinc finger CCCH domain-containing protein 37 [Arabidopsis
thaliana]
gi|75249536|sp|Q941Q3.1|C3H37_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 37;
Short=AtC3H37; AltName: Full=ENHANCER OF AG-4 protein 1
gi|16797661|gb|AAK01470.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
gi|332641710|gb|AEE75231.1| zinc finger CCCH domain-containing protein 37 [Arabidopsis
thaliana]
Length = 524
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 151/312 (48%), Gaps = 69/312 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 281
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMRQ 135
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 282 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 341
Query: 136 DEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP 195
E CP+Y++TGS +Y + +R +++P + +V
Sbjct: 342 GEVDCPFYLKTGS------CKYGATCRYNHPERT-----------AFIPQAAGVNYSLVS 384
Query: 196 APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
+ NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C
Sbjct: 385 S---NTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSECD 427
Query: 256 YYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGI 308
YYM TG CK+G CKFHHP +R++ Q + G P R G C Y G
Sbjct: 428 YYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGT 487
Query: 309 CKFGPTCRFDHP 320
CK+G TC+FDHP
Sbjct: 488 CKYGATCKFDHP 499
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 90/223 (40%), Gaps = 62/223 (27%)
Query: 132 PMRQDEKSCPYYM--RTGSFLPSSGLQY-----AGSLPTWSLQRAPYLSSRLQGTQSYMP 184
P R EK C +YM RT F S + G +P W + AP
Sbjct: 172 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDW--KEAP-------------- 215
Query: 185 LIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 244
V P++ PG P P I Y S+ + + +S +Q+
Sbjct: 216 --VVPNEEYPERPG--------EPDCPYYIKTQRCKYGSKCK--FNHPREEAAVSVETQD 263
Query: 245 -LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG---------------- 287
LPERP +P C +YM TG CK+G CKFHHPK+ S++ +IG
Sbjct: 264 SLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPH 323
Query: 288 ----------PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
GLP R G+ C Y G CK+G TCR++HP
Sbjct: 324 VTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL-- 86
GV A+ YP RPG+ +C +Y +TG C +G C+F+HPA A Q + L
Sbjct: 411 GVISAT-YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG 469
Query: 87 -PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 470 YPRREGALNCPYYMKTGTCKYGATCKFDHP 499
>gi|110738176|dbj|BAF01019.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
Length = 522
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 151/312 (48%), Gaps = 69/312 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 220 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 279
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMRQ 135
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 280 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 339
Query: 136 DEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP 195
E CP+Y++TGS +Y + +R +++P + +V
Sbjct: 340 GEVDCPFYLKTGS------CKYGATCRYNHPERT-----------AFIPQAAGVNYSLVS 382
Query: 196 APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
+ NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C
Sbjct: 383 S---NTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSECD 425
Query: 256 YYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGI 308
YYM TG CK+G CKFHHP +R++ Q + G P R G C Y G
Sbjct: 426 YYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGT 485
Query: 309 CKFGPTCRFDHP 320
CK+G TC+FDHP
Sbjct: 486 CKYGATCKFDHP 497
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 90/223 (40%), Gaps = 62/223 (27%)
Query: 132 PMRQDEKSCPYYM--RTGSFLPSSGLQY-----AGSLPTWSLQRAPYLSSRLQGTQSYMP 184
P R EK C +YM RT F S + G +P W + AP
Sbjct: 170 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDW--KEAP-------------- 213
Query: 185 LIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 244
V P++ PG P P I Y S+ + + +S +Q+
Sbjct: 214 --VVPNEEYPERPG--------EPDCPYYIKTQRCKYGSKCK--FNHPREEAAVSVETQD 261
Query: 245 -LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG---------------- 287
LPERP +P C +YM TG CK+G CKFHHPK+ S++ +IG
Sbjct: 262 SLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPH 321
Query: 288 ----------PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
GLP R G+ C Y G CK+G TCR++HP
Sbjct: 322 VTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 364
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL-- 86
GV A+ YP RPG+ +C +Y +TG C +G C+F+HPA A Q + L
Sbjct: 409 GVISAT-YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG 467
Query: 87 -PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 468 YPRREGALNCPYYMKTGTCKYGATCKFDHP 497
>gi|12321969|gb|AAG51026.1|AC069474_25 zinc finger protein, putative, 5' partial; 146-2518 [Arabidopsis
thaliana]
Length = 328
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 162/348 (46%), Gaps = 81/348 (23%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 26 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 85
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMRQ 135
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 86 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 145
Query: 136 DEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP 195
E CP+Y++TGS +Y + +R +++P + +V
Sbjct: 146 GEVDCPFYLKTGS------CKYGATCRYNHPERT-----------AFIPQAAGVNYSLVS 188
Query: 196 APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
+ NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C
Sbjct: 189 S---NTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSECD 231
Query: 256 YYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGI 308
YYM TG CK+G CKFHHP +R++ Q + G P R G C Y G
Sbjct: 232 YYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGT 291
Query: 309 CKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIET 356
CK+G TC+FDHP PP ++ + A AT++ T
Sbjct: 292 CKYGATCKFDHP------------PPGEVMAKTTSEADAAGATNTDTT 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 301
++ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 23 NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCT 79
Query: 302 NYSMYGICKFGPTCRFDHP 320
Y G CKFG +C+F HP
Sbjct: 80 FYMKTGKCKFGLSCKFHHP 98
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL-- 86
GV A+ YP RPG+ +C +Y +TG C +G C+F+HPA A Q + L
Sbjct: 215 GVISAT-YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG 273
Query: 87 -PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 274 YPRREGALNCPYYMKTGTCKYGATCKFDHP 303
>gi|147833028|emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]
Length = 1504
Score = 168 bits (426), Expect = 4e-39, Method: Composition-based stats.
Identities = 119/381 (31%), Positives = 161/381 (42%), Gaps = 98/381 (25%)
Query: 10 NAVANQSADNIEEAIWRL-KIHDNQEGGGV-----AQASPYPARPGEPDCLFYRRTGLCG 63
N + S + E+ I L + + + G GV A P RPGEPDC ++ +T C
Sbjct: 337 NTIMGMSVEGFEKEINSLLRKMEARRGCGVMVPIVAANEFLPQRPGEPDCPYFMKTQKCK 396
Query: 64 YGSNCRFNHPA--YAAQGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD- 117
+G C+FNHP + GA + LPER + C +Y+KTG CK+G+TCK+HHPKD
Sbjct: 397 FGHKCKFNHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKDI 456
Query: 118 ------------------RNGAG-------PVSF------NILGLPMRQDEKSCPYYMRT 146
GAG PVS N GLPMR E CP+Y++T
Sbjct: 457 QIASTGKNNADGEQAETGAKGAGTTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKT 516
Query: 147 GSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI 206
GS + +Y + P + IV +P N +G +
Sbjct: 517 GSCKYGATCRYNHP-----------------DRNAINPPAAAIGHAIVASPAANLNVGVV 559
Query: 207 GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC------------ 254
P+ TSI R +G G ++ P+RP Q +C
Sbjct: 560 NPV--TSILHP---IDPRLSQTMGVGPTIY---------PQRPGQMECDVCLHLLSNFIP 605
Query: 255 -------RYYMNTGTCKYGADCKFHHPKERIAQSAAS-----NIGPLGLPSRPGQAICSN 302
+YM TG CK+G CKFHHP +R A +A + G P R G IC
Sbjct: 606 TDATFMDEFYMKTGECKFGERCKFHHPIDRSAPTATKLQQNIRLTLAGFPRREGTIICPF 665
Query: 303 YSMYGICKFGPTCRFDHPYAG 323
Y G CK+G TC+FDHP G
Sbjct: 666 YLKTGTCKYGVTCKFDHPPPG 686
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 49/148 (33%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSAASN------------------ 285
LPERP + C +Y+ TG CK+GA CKFHHPK+ +IA + +N
Sbjct: 424 LPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGD 483
Query: 286 ------IGPL------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 333
+ P GLP R G+ C Y G CK+G TCR++HP
Sbjct: 484 VKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHP------------- 530
Query: 334 PLSILDSSLMNHQAISATHSIETSPDAS 361
D + +N A + H+I SP A+
Sbjct: 531 -----DRNAINPPAAAIGHAIVASPAAN 553
>gi|255575514|ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis]
gi|223531909|gb|EEF33724.1| conserved hypothetical protein [Ricinus communis]
Length = 500
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 153/327 (46%), Gaps = 74/327 (22%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQP 93
A P P RPGEPDC ++ +T C YGS C+FNHP A + + LPER +P
Sbjct: 173 AATTEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSEP 232
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKD-------------RNGAGP---------------VS 125
C +Y KTG CK+G+TCK+HHPKD +N A +S
Sbjct: 233 ICAFYAKTGRCKFGATCKFHHPKDIQIALGQENCNIMQNEAAAMTHGTTGDVNAVKACIS 292
Query: 126 FN--IL----GLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGT 179
FN +L GLP+R E CP+Y++TGS + +Y + P + P
Sbjct: 293 FNQALLHNSKGLPIRPGEVDCPFYLKTGSCKYGATCRY--NHPDRNAINPP-------AA 343
Query: 180 QSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILS 239
PL+ SP+ N +G+I P + A IY S + LG G ++
Sbjct: 344 AIGHPLLASPAA--------NLNLGDINPAASIYQA----IYPSFSSPMLGVGPTIY--- 388
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI------AQSAASNIGPLGLPS 293
P+RP +C YYM TG CK+G C+FHHP +R AQ A + GLP
Sbjct: 389 ------PQRPGHAECDYYMKTGECKFGERCRFHHPIDRSAPTATQAQQQAVKLTLAGLPR 442
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDHP 320
R G C Y G CK+G TC+FDHP
Sbjct: 443 REGAVHCPYYMKTGTCKYGATCKFDHP 469
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----------AQYREELPERNG 91
S YP RPGE DC Y T C +G +C+F+HP + +G A E LPER G
Sbjct: 125 SIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPNWKEVPLAATTEPLPERPG 184
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTG 147
+PDC Y+LKT CKYGS CK++HPKD G N + LP R E C +Y +TG
Sbjct: 185 EPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSEPICAFYAKTG 241
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 297
L+A+++ LPERP +PDC Y++ T CKYG+ CKF+HPK+ +A ++ + LP RP +
Sbjct: 172 LAATTEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSE 231
Query: 298 AICSNYSMYGICKFGPTCRFDHP 320
IC+ Y+ G CKFG TC+F HP
Sbjct: 232 PICAFYAKTGRCKFGATCKFHHP 254
>gi|449524278|ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like,
partial [Cucumis sativus]
Length = 403
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 144/289 (49%), Gaps = 55/289 (19%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPY 142
E PER GQP C YY++TG CK+G++CKYHHP+ G+ PVS N G P+R EK C Y
Sbjct: 10 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 69
Query: 143 YMRTG--SFLPS--------SGLQY-----------AGSLPTWS---------------- 165
Y++ G F + +GLQ+ AG +P S
Sbjct: 70 YLKNGQCKFGATCKFHHPEPAGLQFPAPSPVQVAPIAGQVPAPSVYPPVQSPSAHSSQQY 129
Query: 166 --LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI---AGSNLI 220
+ P L S Y P++VSP G+V P W+ Y + P++ S GS +
Sbjct: 130 GVILARPSLLSNPYVPGPYGPMLVSP--GVVQFPSWSPYPAPMSPVASPSAQPSVGSGPL 187
Query: 221 Y-----SSRNQGDLGAGAQMHILSASS-----QNLPERPDQPDCRYYMNTGTCKYGADCK 270
Y S G G+ M SS + PERP QP+C+YYM TG CK+G+ C+
Sbjct: 188 YGMAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPGQPECQYYMRTGDCKFGSSCR 247
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+HHP E + + + LGLP RPG C+++ G+CKFGP C+FDH
Sbjct: 248 YHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQRGMCKFGPACKFDH 296
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ PER QP C+YYM TG CK+GA CK+HHP++ + ++ G P RPG+ CS
Sbjct: 10 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 69
Query: 303 YSMYGICKFGPTCRFDHP 320
Y G CKFG TC+F HP
Sbjct: 70 YLKNGQCKFGATCKFHHP 87
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +GS+CR++HP + LP R G P C +++
Sbjct: 222 FPERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFM 281
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ H DR P + ++ +P+
Sbjct: 282 QRGMCKFGPACKFDHSMDRLSYSPSASSLADMPV 315
>gi|125569790|gb|EAZ11305.1| hypothetical protein OsJ_01167 [Oryza sativa Japonica Group]
Length = 376
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 172/334 (51%), Gaps = 50/334 (14%)
Query: 29 IHDNQEGGGV--AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL 86
I GGG A A YP R G+P C +Y +TG C +G+NC+++HP GA L
Sbjct: 4 IDSANFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHP--KQDGAVLPVML 61
Query: 87 -----PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
P R G+ +C YY+KTG CK+G+TCK+HHP+ G P++ I P++ + P
Sbjct: 62 NNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPE--FGGVPMTPGIY-PPLQSPSIASP 118
Query: 142 YYMRTGSFLPSSGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWN 200
+ YA SL W + R P + S + G SY P+++ S G++P GW+
Sbjct: 119 H-------------PYA-SLANWQMGRPPVVPGSYIPG--SYTPMML--SSGMIPLQGWS 160
Query: 201 TYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSASSQN-------- 244
Y ++ P+ + A N+ +Y + G G + S++ Q+
Sbjct: 161 PYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHG 219
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+
Sbjct: 220 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 279
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
G C++G C++DHP + Y S PLS +
Sbjct: 280 QNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 311
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 220 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 279
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 280 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 313
>gi|225462348|ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis
vinifera]
gi|297736083|emb|CBI24121.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 156/346 (45%), Gaps = 75/346 (21%)
Query: 19 NIEEAIWRLK--IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-- 74
+ IW + I D +E VA P RPGEPDC ++ +T C +G C+FNHP
Sbjct: 184 KFDHPIWVPEGGIPDWKEVPIVAANEFLPQRPGEPDCPYFMKTQKCKFGHKCKFNHPKDQ 243
Query: 75 YAAQGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD-------------- 117
+ GA + LPER + C +Y+KTG CK+G+TCK+HHPKD
Sbjct: 244 IISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGE 303
Query: 118 -----RNGAG-------PVSF------NILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAG 159
GAG PVS N GLPMR E CP+Y++TGS +Y
Sbjct: 304 QAETGAKGAGTTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGS------CKYGA 357
Query: 160 SLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL 219
+ R + P + IV +P N +G + P+ TSI
Sbjct: 358 TCRYNHPDR-----------NAINPPAAAIGHAIVASPAANLNVGVVNPV--TSILHP-- 402
Query: 220 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 279
R +G G ++ P+RP Q +C +YM TG CK+G CKFHHP +R A
Sbjct: 403 -IDPRLSQTMGVGPTIY---------PQRPGQMECDFYMKTGECKFGERCKFHHPIDRSA 452
Query: 280 QSAAS-----NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+A + G P R G IC Y G CK+G TC+FDHP
Sbjct: 453 PTATKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDHP 498
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 49/151 (32%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSAASN------------------ 285
LPERP + C +Y+ TG CK+GA CKFHHPK+ +IA + +N
Sbjct: 258 LPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGD 317
Query: 286 ------IGPL------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 333
+ P GLP R G+ C Y G CK+G TCR++HP
Sbjct: 318 VKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHP------------- 364
Query: 334 PLSILDSSLMNHQAISATHSIETSPDASSKI 364
D + +N A + H+I SP A+ +
Sbjct: 365 -----DRNAINPPAAAIGHAIVASPAANLNV 390
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 241 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIG 287
S+ NLP +RP + DC +YM T TCK+G CKF HP + + AA+
Sbjct: 152 SASNLPIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPIVAANEF- 210
Query: 288 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RPG+ C + CKFG C+F+HP
Sbjct: 211 ---LPQRPGEPDCPYFMKTQKCKFGHKCKFNHP 240
>gi|357478677|ref|XP_003609624.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510679|gb|AES91821.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 379
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 159/343 (46%), Gaps = 96/343 (27%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP RP E DC++Y RTG CGYGS CRFNHP A+ E PER GQP C YY +
Sbjct: 43 YPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYAR 102
Query: 101 TGTCKYGSTCKYHHPKDRNGAG-PVSFNILGLPMRQDEKSCPYYMRTGSFL--------- 150
TG+CK+G++CKYHHP+ G PVS N G P+R EK C YY++TG
Sbjct: 103 TGSCKFGASCKYHHPRQAAGTTPPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHH 162
Query: 151 --PSSGLQYAGS---------LPTWS--------------------LQRAPYL-SSRLQG 178
P+ G A S +P S + R P L S +QG
Sbjct: 163 PQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQPPSGPSQQQYGVLVARPPLLHGSFVQG 222
Query: 179 TQSYMPLIVSPSQGIVPAPGWNTYMGNIG-PLSPTS---IAGSNLIY------------- 221
Y P+++SP+ +VP GW+ Y G P+ P+S GS +Y
Sbjct: 223 --PYGPMVMSPT--MVPFSGWSPYQAPAGSPVLPSSNPLSVGSTQLYGITQLPSPTTAYT 278
Query: 222 -------------------------SSRNQGDLGAGAQMHILSASSQ---NLPERPDQPD 253
S + G + S SSQ +LPERPDQ +
Sbjct: 279 QLPSPTTAYTGPYQSSGPSAGPYQSSGPSAGPYQSSGPSTGPSGSSQKEHSLPERPDQQE 338
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 296
C++YM TG CK+G+ C++HHP + A N+ P+GLP RPG
Sbjct: 339 CQHYMKTGDCKFGSTCRYHHPPDMGAPKV--NLSPIGLPLRPG 379
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
PER QP C+YY TG+CK+GA CK+HHP++ + ++ G P R G+ CS Y
Sbjct: 87 EYPERVGQPVCQYYARTGSCKFGASCKYHHPRQAAGTTPPVSLNCYGYPLRVGEKECSYY 146
Query: 304 SMYGICKFGPTCRFDHP 320
G CKFG TC+F HP
Sbjct: 147 VKTGQCKFGATCKFHHP 163
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
++ P+RPD+ DC YY+ TG C YG+ C+F+HP++R A A+ I P R GQ +C
Sbjct: 41 ESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIA-GEYPERVGQPVCQY 99
Query: 303 YSMYGICKFGPTCRFDHP 320
Y+ G CKFG +C++ HP
Sbjct: 100 YARTGSCKFGASCKYHHP 117
>gi|449461124|ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Cucumis sativus]
Length = 527
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 156/339 (46%), Gaps = 62/339 (18%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----------QYREELPERNGQP 93
YP RPGE DC Y T C +G +C+F+HP + +G E+LPER G P
Sbjct: 158 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDP 217
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPYYMRTGS---- 148
DC Y+LKT CK+GS CK++HPKDR + G + LP R E C +Y++TG+
Sbjct: 218 DCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFG 277
Query: 149 ----------FLPSSGLQYAGSLPTWSLQRAPYLS--SRLQGTQSYMPLIVSPSQGIVPA 196
SG +Y S T ++ ++ S P I+ S+G+
Sbjct: 278 INCKFHHPKDIQILSGEEYGNSEQTLMVKTEERAGDFKLVKPPISLSPAIMHNSKGLPIR 337
Query: 197 PG-----WNTYMGN----------------IGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
PG + G+ I P +P + + + ++ N G + +
Sbjct: 338 PGEVDCPFYLKTGSCKYGTTCRYNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAI 397
Query: 236 H----------ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA--QSAA 283
+ +L + S P+RP Q +C +YM TG CK+G CKFHHP +R A Q A
Sbjct: 398 YQAVDPRLIQPLLGSGSSIYPQRPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQGAL 457
Query: 284 SNIGPL--GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
N+ GLP R IC Y G CK+G TC+FDHP
Sbjct: 458 HNVKLTLAGLPRREEAIICPYYLKTGTCKYGTTCKFDHP 496
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 116/286 (40%), Gaps = 68/286 (23%)
Query: 28 KIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQY--- 82
K + G + AS P RP EP C FY +TG C +G NC+F+HP G +Y
Sbjct: 240 KDRSDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNS 299
Query: 83 -------REE------------------------LPERNGQPDCGYYLKTGTCKYGSTCK 111
EE LP R G+ DC +YLKTG+CKYG+TC+
Sbjct: 300 EQTLMVKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 359
Query: 112 YHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPY 171
Y+HP DRN P + ++ M M TG PS+ + A
Sbjct: 360 YNHP-DRNAINPSTPAMVHPAMVSTAN-----MNTGFVNPSNAIYQA------------- 400
Query: 172 LSSRLQGTQSYMPLIVSPSQGIVPAPGW---NTYMGNIGPLSPTSIAGSNLIYSSRNQGD 228
+ RL PL+ S S PG + YM + ++
Sbjct: 401 VDPRL-----IQPLLGSGSSIYPQRPGQIECDFYMKT----GDCKFGERCKFHHPIDRSA 451
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
GA +H + + LP R + C YY+ TGTCKYG CKF HP
Sbjct: 452 PKQGA-LHNVKLTLAGLPRREEAIICPYYLKTGTCKYGTTCKFDHP 496
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 241 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIG 287
S+ NLP +RP + DC +YM T TCK+G CKF HP + + Q A S
Sbjct: 151 STSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANSE-- 208
Query: 288 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP R G C + CKFG C+F+HP
Sbjct: 209 --DLPERLGDPDCPYFLKTQRCKFGSRCKFNHP 239
>gi|224109138|ref|XP_002315096.1| predicted protein [Populus trichocarpa]
gi|222864136|gb|EEF01267.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 161/362 (44%), Gaps = 81/362 (22%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--- 85
I D +E +A + +P RPGEPDC ++ +T C YG NC+FNHP
Sbjct: 203 IPDWKEVPLIATSETFPERPGEPDCPYFLKTQRCKYGLNCKFNHPKEKLSLGDSENSSVS 262
Query: 86 -LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD----------RNGA------------- 121
LPER +P C +Y+KTG CK+G++CK+HHPKD NG
Sbjct: 263 ALPERPSEPPCAFYMKTGKCKFGASCKFHHPKDIQIPLSGLGNDNGVQTDSVVKNEGITG 322
Query: 122 ------GPVS----FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPY 171
PV+ N GLP+R E CP+Y++TGS + +Y P
Sbjct: 323 DVDVIYSPVTPALHHNSKGLPIRLGEVDCPFYLKTGSCKYGATCRY----------NHPE 372
Query: 172 LSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 231
++ + IV+PS + N G +P + IY + +
Sbjct: 373 RTAINPPAAAIGHPIVAPSLANL----------NFGVFNPAAS-----IYQTID------ 411
Query: 232 GAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA------QSAASN 285
++ +L P+RP Q +C +YM TG CK+G CKFHHP +R A Q
Sbjct: 412 -PRLSMLGVGPTFYPQRPGQTECDFYMKTGECKFGERCKFHHPIDRSAPTEKQIQQQTVK 470
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNH 345
+ GLP R G C Y G CK+G TC+FDHP G + S LD++++
Sbjct: 471 LTLAGLPRREGAVHCPYYMKTGACKYGATCKFDHPPPGEVMAVATS------LDAAVLGA 524
Query: 346 QA 347
+A
Sbjct: 525 EA 526
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 137/329 (41%), Gaps = 93/329 (28%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----------QYREELPERNGQP 93
YP RPGE DC Y T C +G C+F+HP + +G E PER G+P
Sbjct: 166 YPQRPGEKDCAHYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPLIATSETFPERPGEP 225
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAG-PVSFNILGLPMRQDEKSCPYYMRTGSFLPS 152
DC Y+LKT CKYG CK++HPK++ G + ++ LP R E C +YM+TG
Sbjct: 226 DCPYFLKTQRCKYGLNCKFNHPKEKLSLGDSENSSVSALPERPSEPPCAFYMKTGKCKFG 285
Query: 153 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPT 212
+ ++ P +P G +GN +
Sbjct: 286 ASCKFH-----------------------------HPKDIQIPLSG----LGNDNGVQTD 312
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMH-----ILSASSQNLPERPDQPDCRYYMNTGTCKYGA 267
S+ +N+G G ++ L +S+ LP R + DC +Y+ TG+CKYGA
Sbjct: 313 SVV--------KNEGITGDVDVIYSPVTPALHHNSKGLPIRLGEVDCPFYLKTGSCKYGA 364
Query: 268 DCKFHHPKER-------------IAQSAAS-----------------------NIGPLGL 291
C+++HP+ +A S A+ +GP
Sbjct: 365 TCRYNHPERTAINPPAAAIGHPIVAPSLANLNFGVFNPAASIYQTIDPRLSMLGVGPTFY 424
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPGQ C Y G CKFG C+F HP
Sbjct: 425 PQRPGQTECDFYMKTGECKFGERCKFHHP 453
>gi|147842162|emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera]
Length = 232
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 112/162 (69%), Gaps = 13/162 (8%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG-SFLPSS 153
C YY++TG CK+G+TCK+HH + P S + LP+ S + TG S PSS
Sbjct: 82 CSYYMRTGLCKFGATCKFHHLQ------PASIGTV-LPI----TSPAAFGSTGVSITPSS 130
Query: 154 GLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPT 212
GL Y G +P WSL RAP + +QG Q+YMP+I S SQGIVPA GWNTYMGN+ P+S T
Sbjct: 131 GLPYVGGIPAWSLPRAPCMPGPHMQGPQTYMPIIFSSSQGIVPAQGWNTYMGNMSPISST 190
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC 254
SI GSNL+Y+++NQG+ G+G Q+H+LS+S LP+R DQP+C
Sbjct: 191 SILGSNLVYNTKNQGESGSGGQVHLLSSSIPYLPKRRDQPEC 232
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 223 SRNQGDLGAGAQMHIL--SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
SR Q D +M I + N E+P C YYM TG CK+GA CKFHH
Sbjct: 53 SRKQVDADGLTRMQIRLPTTVEVNKEEKP----CSYYMRTGLCKFGATCKFHH 101
>gi|449531215|ref|XP_004172583.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like,
partial [Cucumis sativus]
Length = 205
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 114/207 (55%), Gaps = 40/207 (19%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPE 88
N G + + YP RPGEPDC +Y RTGLC +G+ CRFNHP A A+ + E PE
Sbjct: 2 NLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMKGEFPE 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
R GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG V+ NILG P+R E C YY+RTG
Sbjct: 62 RIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTG 121
Query: 148 SFL------------------------------PSSGLQ-YAGSLPTWSLQRAPYL-SSR 175
P+ G Q Y G WS RA ++ S R
Sbjct: 122 QCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWS--RASFIPSPR 179
Query: 176 LQGTQSYMPLIVSPSQGIVPAPGWNTY 202
QG SY LI+ QG++ PGWN +
Sbjct: 180 WQGPSSYASLIL--PQGVLSVPGWNAF 204
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 8/102 (7%)
Query: 234 QMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLG 290
++ I +A + PER QP+C+YY+ TGTCK+GA CKFHHP+++ IA A NI LG
Sbjct: 47 ELAIATARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNI--LG 104
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 332
P RP + C+ Y G CKFG TC+F HP P N +SL
Sbjct: 105 YPLRPSETECAYYLRTGQCKFGNTCKFHHP---QPTNMMVSL 143
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 228 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 286
+LG+G M S + P RP +PDC YY+ TG C++GA C+F+HP R +A + A
Sbjct: 2 NLGSGEIM-----GSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMK 56
Query: 287 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G P R GQ C Y G CKFG TC+F HP
Sbjct: 57 GE--FPERIGQPECQYYLKTGTCKFGATCKFHHP 88
>gi|218187915|gb|EEC70342.1| hypothetical protein OsI_01241 [Oryza sativa Indica Group]
Length = 385
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 149/341 (43%), Gaps = 96/341 (28%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA--------QYREELPERNGQPDCG 96
P RPGE DC++Y RTG CGYG NCR+NHP A A + E PER GQP C
Sbjct: 20 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCE 79
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQ 156
YY+K GTCK+GS CKY HP++ V N G P+R EK C YY++TG S +
Sbjct: 80 YYMKNGTCKFGSNCKYDHPRE-GSVQAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCK 138
Query: 157 YA----------------------------GSLPTWSLQRAPYL-SSRLQGTQSYMPLIV 187
+ L W + R P L S L G SY P+++
Sbjct: 139 FHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQMGRPPVLPGSFLSG--SYPPMML 196
Query: 188 SPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPE 247
PS +VP GWN Y+ + ++ S G + + R G + L A
Sbjct: 197 -PST-VVPMQGWNPYISPVNQVA--SAGGHQTVQAGRFMAYRTKGLLLQSLMA------- 245
Query: 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
Y+NT PK S PLGLP RPG C+ Y+ +G
Sbjct: 246 ---------YLNT-------------PKSNCMLS------PLGLPLRPGSQPCAYYTQHG 277
Query: 308 ICKFGPTCRFDHPY-----------------AGYPINYGLS 331
CKFGPTC+FDHP A YP+NY ++
Sbjct: 278 FCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVA 318
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG----LPSR 294
+ ++ LPERP + DC YY+ TG C YG +C+++HP++R A + + G P R
Sbjct: 13 AVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPER 72
Query: 295 PGQAICSNYSMYGICKFGPTCRFDHPYAG 323
PGQ +C Y G CKFG C++DHP G
Sbjct: 73 PGQPVCEYYMKNGTCKFGSNCKYDHPREG 101
>gi|413947010|gb|AFW79659.1| hypothetical protein ZEAMMB73_788382 [Zea mays]
Length = 374
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 159/338 (47%), Gaps = 66/338 (19%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYA--AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
+Y + G C +GSNC+F+HP + A P R G+ +C YY+KTG CK+G TCK+
Sbjct: 22 YYAKNGTCKFGSNCKFDHPRESGFVPVALNNSGFPLRLGEKECSYYMKTGHCKFGGTCKF 81
Query: 113 HHPK-----DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQ 167
HHP+ + G P P++ S P+ S W +
Sbjct: 82 HHPELGFLTETPGMYP--------PVQPSPISSPHPYPHHS--------------NWQMG 119
Query: 168 RAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG---------- 216
R + S L G Y P+++ P+ ++P GWN Y + P++ T+ AG
Sbjct: 120 RPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPY---VSPMNQTTPAGGQQAVPAGPS 172
Query: 217 ---------SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 267
S + Y S + L + + + PERP QP+C +YM TGTCKYGA
Sbjct: 173 YGLSHQEPTSAVTYGS-HYAQLYSSSGTSSSNIQEYVFPERPGQPECEHYMKTGTCKYGA 231
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 327
CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP G P N
Sbjct: 232 ACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPTCKFDHP-MGTP-N 289
Query: 328 YGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIP 365
Y L P SL + H+ +P A +P
Sbjct: 290 YSLPAP-------SLTDVPVAPYPHTFSVTPIAPYLLP 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C Y +TG C YG+ C+++HP Y + LP R G C YY
Sbjct: 209 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYA 268
Query: 100 KTGTCKYGSTCKYHHP 115
G CK+G TCK+ HP
Sbjct: 269 HHGFCKFGPTCKFDHP 284
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 255 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
+YY GTCK+G++CKF HP+E A N G P R G+ CS Y G CKFG T
Sbjct: 21 QYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLGEKECSYYMKTGHCKFGGT 78
Query: 315 CRFDHPYAGY 324
C+F HP G+
Sbjct: 79 CKFHHPELGF 88
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 28 KIHDNQEGGGVAQA---SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K +E G V A S +P R GE +C +Y +TG C +G C+F+HP
Sbjct: 36 KFDHPRESGFVPVALNNSGFPLRLGEKECSYYMKTGHCKFGGTCKFHHP 84
>gi|168028390|ref|XP_001766711.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682143|gb|EDQ68564.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 323
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 141/309 (45%), Gaps = 71/309 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA-AQGAQYR-EELPERNGQPDCGYYLKT 101
YP RPGE C +Y T C +G CR++HPA+ A G LP+R +PDC Y++KT
Sbjct: 1 YPQRPGEKVCAYYMITRTCSFGVTCRYDHPAWVTAVGTPVDPSSLPQRPTEPDCAYFMKT 60
Query: 102 GTCKYGSTCKYHHPKDR-------------NGAGPV----SFNILGLPMRQDEKSCPYYM 144
G C+YGS C+++HPK++ N A P+ +FN GLP+R E +C +Y
Sbjct: 61 GECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPINPATTFNSKGLPLRPGEGNCVFYG 120
Query: 145 RTGSFLPSSGLQY---AGSLPTWSLQ--RAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGW 199
+TGS + +Y LP S Q A Y + Q +Q Y V
Sbjct: 121 KTGSCKYGTACRYNHPEILLPDVSGQATTADYAYTSTQNSQEYAYAAAQAYHQNV----- 175
Query: 200 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMN 259
+P +A L + P+RP +PDC +Y+
Sbjct: 176 ----------TPMYVASMGLPH------------------------PQRPGEPDCTFYIK 201
Query: 260 TGTCKYGADCKFHHPKERI--------AQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 311
TG C +GA CKFHHP +RI A + GLP R + C+ Y G CKF
Sbjct: 202 TGECSFGATCKFHHPPDRIPSGIPKPAKNQATVKLSLAGLPRRETETPCAYYMKTGACKF 261
Query: 312 GPTCRFDHP 320
G TC++DHP
Sbjct: 262 GQTCKYDHP 270
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 94/204 (46%), Gaps = 52/204 (25%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------------YAAQGAQYREEL---- 86
P RPGE +C+FY +TG C YG+ CR+NHP YA Q +E
Sbjct: 108 PLRPGEGNCVFYGKTGSCKYGTACRYNHPEILLPDVSGQATTADYAYTSTQNSQEYAYAA 167
Query: 87 --------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---- 122
P+R G+PDC +Y+KTG C +G+TCK+HHP DR +G
Sbjct: 168 AQAYHQNVTPMYVASMGLPHPQRPGEPDCTFYIKTGECSFGATCKFHHPPDRIPSGIPKP 227
Query: 123 -----PVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQ 177
V ++ GLP R+ E C YYM+TG+ +Y P + RA +R +
Sbjct: 228 AKNQATVKLSLAGLPRRETETPCAYYMKTGACKFGQTCKYDHPPPQEIIARA-VEQARGE 286
Query: 178 GTQSY---MPL-IVSPSQGIVPAP 197
SY MP + S SQ + P P
Sbjct: 287 VPSSYDVNMPTSVASDSQDVTPLP 310
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 12/85 (14%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNH---------PAYAAQGAQYREE---LPERN 90
P+P RPGEPDC FY +TG C +G+ C+F+H P A A + LP R
Sbjct: 186 PHPQRPGEPDCTFYIKTGECSFGATCKFHHPPDRIPSGIPKPAKNQATVKLSLAGLPRRE 245
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHP 115
+ C YY+KTG CK+G TCKY HP
Sbjct: 246 TETPCAYYMKTGACKFGQTCKYDHP 270
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 20/95 (21%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE---------------- 85
S P RP EPDC ++ +TG C YGS CRFNHP + + E+
Sbjct: 43 SSLPQRPTEPDCAYFMKTGECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPINPATTF 102
Query: 86 ----LPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
LP R G+ +C +Y KTG+CKYG+ C+Y+HP+
Sbjct: 103 NSKGLPLRPGEGNCVFYGKTGSCKYGTACRYNHPE 137
>gi|218186661|gb|EEC69088.1| hypothetical protein OsI_37978 [Oryza sativa Indica Group]
Length = 529
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 39/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 231 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 290
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGTQS---------- 181
CPYYMRTGS ++ ++ P+ + P L +QG+ S
Sbjct: 291 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 350
Query: 182 ------YMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 225
++P I + P QG+ P P WN Y + P P + + + N
Sbjct: 351 RTVNEHHLPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 410
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 411 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 468
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 469 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 509
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 430 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 489
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 490 GVCKFGPACAYNHP 503
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 193 IVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ-NLPERPD 250
++P P GW P +AG + + G++ + + +A S+ P RP
Sbjct: 59 LLPKPTGWED--------GPVVVAGDEVSGGEKLPGEVASAVGVEGAAADSRPRFPRRPG 110
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKER 277
+PDC YY+ G+C++G CKF+HP +
Sbjct: 111 EPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 36 GGVAQASP-YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
G A + P +P RPGEPDC +Y + G C +G C+FNHPA
Sbjct: 96 GAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPA 135
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
A R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 99 ADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 276 ERIAQSAASNIGPLG--------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
E++ AS +G G P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 82 EKLPGEVASAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|77554314|gb|ABA97110.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|215767051|dbj|BAG99279.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616906|gb|EEE53038.1| hypothetical protein OsJ_35760 [Oryza sativa Japonica Group]
Length = 528
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 39/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 230 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 289
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGTQS---------- 181
CPYYMRTGS ++ ++ P+ + P L +QG+ S
Sbjct: 290 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 349
Query: 182 ------YMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 225
++P I + P QG+ P P WN Y + P P + + + N
Sbjct: 350 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 409
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 410 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 467
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 468 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 508
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 429 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 488
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 489 GVCKFGPACAYNHP 502
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+P RPGEPDC +Y + G C +G C+FNHPA
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPA 135
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 282 PLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|115488164|ref|NP_001066569.1| Os12g0278800 [Oryza sativa Japonica Group]
gi|122204937|sp|Q2QTY2.1|C3H65_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 65;
Short=OsC3H65
gi|77554313|gb|ABA97109.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113649076|dbj|BAF29588.1| Os12g0278800 [Oryza sativa Japonica Group]
Length = 529
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 39/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 231 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 290
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGTQS---------- 181
CPYYMRTGS ++ ++ P+ + P L +QG+ S
Sbjct: 291 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 350
Query: 182 ------YMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 225
++P I + P QG+ P P WN Y + P P + + + N
Sbjct: 351 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 410
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 411 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 468
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 469 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 509
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 430 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 489
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 490 GVCKFGPACAYNHP 503
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+P RPGEPDC +Y + G C +G C+FNHPA
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPA 135
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|77554315|gb|ABA97111.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 508
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 39/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 210 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 269
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGTQS---------- 181
CPYYMRTGS ++ ++ P+ + P L +QG+ S
Sbjct: 270 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 329
Query: 182 ------YMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 225
++P I + P QG+ P P WN Y + P P + + + N
Sbjct: 330 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 389
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 390 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 447
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 326
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 448 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 488
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 409 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 468
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 469 GVCKFGPACAYNHP 482
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 131 LPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTW---SLQRAPYLSSRLQGTQSYMPLIV 187
P R E C YY++ GS G++ + P S + S G+ S
Sbjct: 105 FPRRPGEPDCTYYVKFGSC--RFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKAS 162
Query: 188 SPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPE 247
SP P + +Y+ +I P + I + + + +S S
Sbjct: 163 SPDDEQAPKEEYGSYVPDISPEVDSLIIDVKKGRVEPKELKVAKEKRKEFISEGS----- 217
Query: 248 RPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y
Sbjct: 218 --SQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMR 275
Query: 306 YGICKFGPTCRFDHP 320
G CK+ C+F HP
Sbjct: 276 TGSCKYATNCKFHHP 290
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+P RPGEPDC +Y + G C +G C+FNHPA
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPA 135
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 262 PLRPGEKECPYYMRTGSCKYATNCKFHHP 290
>gi|224032427|gb|ACN35289.1| unknown [Zea mays]
gi|413916356|gb|AFW56288.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 527
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV---SFNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 229 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 288
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGT------------ 179
CPYYMRTGS ++ ++ PT + + P L +QG+
Sbjct: 289 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 348
Query: 180 ---QSYMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 226
+ ++P + + P QG+ P+ W+ Y + P P + + + N
Sbjct: 349 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 408
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 409 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 468
Query: 287 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 469 SPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 503
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 33/251 (13%)
Query: 73 PAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL 131
PA A GA + P R G+PDC YYLK GTC++G CK++HP + V +
Sbjct: 89 PAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR-GVGSN 147
Query: 132 PMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQ 191
+ S P +Y G +P S + + + + P +
Sbjct: 148 GSGSNSSSNKASSPDDDQAPKE--EYEGLVPDISDSMV--IDMKRGKLEPKEKVCEEPEK 203
Query: 192 GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ 251
I + L T+IA ++ S+++ + E Q
Sbjct: 204 AI-----------HFTKLDETNIATQKVLKGSKDK--------------RKETFAEGNTQ 238
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSRPGQAICSNYSMYGIC 309
+C+YY G CK+G CK+ H + ++ + + LGLP RPG+ C Y G C
Sbjct: 239 EECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKECPYYMRTGSC 298
Query: 310 KFGPTCRFDHP 320
KF C+F HP
Sbjct: 299 KFATNCKFHHP 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
YP RPG+P+C + ++G C Y CR++HP + LP + QP C YY
Sbjct: 427 YPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYG 486
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CKYG C ++HP
Sbjct: 487 RYGFCKYGPACMFNHP 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C + +NC+F+HP
Sbjct: 281 PLRPGEKECPYYMRTGSCKFATNCKFHHP 309
>gi|226491251|ref|NP_001151211.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
gi|195645032|gb|ACG41984.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
gi|413916355|gb|AFW56287.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
Length = 524
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 226 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 285
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGT------------ 179
CPYYMRTGS ++ ++ PT + + P L +QG+
Sbjct: 286 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 345
Query: 180 ---QSYMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 226
+ ++P + + P QG+ P+ W+ Y + P P + + + N
Sbjct: 346 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 405
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 406 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 465
Query: 287 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 466 SPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 500
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 73 PAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 89 PAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 192 GIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-------SQ 243
G P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 53 GGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGAVDVKV 101
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|226499050|ref|NP_001140642.1| hypothetical protein [Zea mays]
gi|194700310|gb|ACF84239.1| unknown [Zea mays]
gi|407232622|gb|AFT82653.1| C3H54 transcription factor, partial [Zea mays subsp. mays]
gi|413916358|gb|AFW56290.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 544
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 131/275 (47%), Gaps = 36/275 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 246 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 305
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGT------------ 179
CPYYMRTGS ++ ++ PT + + P L +QG+
Sbjct: 306 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 365
Query: 180 ---QSYMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 226
+ ++P + + P QG+ P+ W+ Y + P P + + + N
Sbjct: 366 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 425
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 426 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 485
Query: 287 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 486 SPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 520
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 192 GIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-------SQ 243
G P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 53 GGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGAVDVKV 101
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 73 PAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 89 PAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|242083372|ref|XP_002442111.1| hypothetical protein SORBIDRAFT_08g012360 [Sorghum bicolor]
gi|241942804|gb|EES15949.1| hypothetical protein SORBIDRAFT_08g012360 [Sorghum bicolor]
Length = 537
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 133/276 (48%), Gaps = 39/276 (14%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY +G CK+G CKY H + + V N LGLP+R EK
Sbjct: 239 KETFAEGNAQEECKYYSTSGGCKFGKACKYLHREGKEAKTEVEKAELNFLGLPLRPGEKE 298
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGT------------ 179
CPYYMRTGS ++ ++ PT + + P L +QG+
Sbjct: 299 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENADTPLQNVQGSCQPSLQIWPDHR 358
Query: 180 ---QSYMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 226
+ ++P + + P QG+ P+P W+ Y + P P + + + N
Sbjct: 359 TLNEQHVPFLAPAQSYGGGMVPPQGMYPSPDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 418
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA-ASN 285
A S PERP QP+C++++ +G CKY C+FHHP R QSA +
Sbjct: 419 PMYKAADVPGNQPPPSDEYPERPGQPECQHFIKSGFCKYRMKCRFHHP--RSGQSAPLTG 476
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
+ P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 477 LSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 512
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 142/368 (38%), Gaps = 59/368 (16%)
Query: 10 NAVANQSADNIEEAIWRLKIHDNQEGGGVAQAS-----PYPARPGEPDCLFYRRTGLCGY 64
NAV AD IE+ + L I GGG + S P P R L G
Sbjct: 30 NAV---DADAIEKQLAGLGIAVAGNGGGFPEPSGWDDGPVPVR--------IPAAVLVGR 78
Query: 65 GSNCRFNHPAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
PA A GA + P R G+PDC YYLK GTC++G CK++HP + +
Sbjct: 79 DEGADEKPPAPAPTGAVDVKLRFPRRPGEPDCSYYLKFGTCRFGIKCKFNHPARKKKSSR 138
Query: 124 VSFNILGLPMRQ----DEKSCPYYMRTGSFLP----SSGLQYAGSLPTWSLQRAPYLSSR 175
V + + D+ P G +P S G GSL + + R +S
Sbjct: 139 VRGSGSNSSSNKASSPDDDQAPREEYEG-LVPDISDSMGFDDKGSLSSSEIYRK--MSYE 195
Query: 176 LQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
+ + + P + I P Y + + T+ G+
Sbjct: 196 VIDMERGK---LEPKEKICEEPEKGIYFMKLDETNITTQKGAK----------------- 235
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPS 293
+ E Q +C+YY +G CK+G CK+ H KE + + + LGLP
Sbjct: 236 ---DKRKETFAEGNAQEECKYYSTSGGCKFGKACKYLHREGKEAKTEVEKAELNFLGLPL 292
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI--LDSSLMNHQAISAT 351
RPG+ C Y G CKF C+F HP P N P L D+ L N Q S
Sbjct: 293 RPGEKECPYYMRTGSCKFATNCKFHHP---DPTNASSKEPGLEHENADTPLQNVQG-SCQ 348
Query: 352 HSIETSPD 359
S++ PD
Sbjct: 349 PSLQIWPD 356
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 70 FNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
NHP Y A + E PER GQP+C +++K+G CKY C++HHP+ A
Sbjct: 416 MNHPMYKAADVPGNQPPPSDEYPERPGQPECQHFIKSGFCKYRMKCRFHHPRSGQSAPLT 475
Query: 125 SFNILGLPMRQDEKSCPYYMRTG 147
+ +GLP++ D+ C YY R G
Sbjct: 476 GLSPIGLPIKPDQPVCTYYGRYG 498
>gi|218188663|gb|EEC71090.1| hypothetical protein OsI_02867 [Oryza sativa Indica Group]
Length = 463
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 154/347 (44%), Gaps = 71/347 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG--------AQYREELPERNGQPDC 95
YP RPGE DC FY T C +G +C+F+HP + +G A E PE+ G+PDC
Sbjct: 104 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEESYPEQQGEPDC 163
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGA---GPVSFNIL-----GLPMRQDEKSCPYYMRTG 147
+++KTG CK+GS CK++HPK++ A G + L LP+R E C +Y +TG
Sbjct: 164 PFFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDKHLIADSSILPVRPSEPLCSFYAKTG 223
Query: 148 --SFLPSSGLQYAGSLPTWSLQRAPYLSSRLQG----------TQSYMPLIVSPSQ---- 191
F + + S Q P + ++G + M V+ +Q
Sbjct: 224 KCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNS 283
Query: 192 -GIVPAPG-----WNTYMGNIG-------------------PLSPTSIAG--SNLIYSSR 224
G+ PG + MG+ PL T + S L+ SS
Sbjct: 284 KGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSA 343
Query: 225 N--QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 282
N QG A M + P+RP C +YM TG CK+ CKFHHP +R A
Sbjct: 344 NFMQGFDFHAAHMPV-GPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDP 402
Query: 283 ASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++N P GLP R +C+ Y G+CKFG C+FDHP
Sbjct: 403 SANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 449
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 130/333 (39%), Gaps = 85/333 (25%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--- 85
I + +E V ++ YP + GEPDC F+ +TG C +GS C+FNHP +
Sbjct: 141 IPNWKEAANVEES--YPEQQGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDK 198
Query: 86 --------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR------------------- 118
LP R +P C +Y KTG CK+ + CK++HPKD
Sbjct: 199 HLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGET 258
Query: 119 ---NGAGPVS------------FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPT 163
+ A VS FN GLPMR E CP F G GS
Sbjct: 259 DIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCP-------FYMKMGSCKFGSTCR 311
Query: 164 WSLQRAPYLSSRLQGTQSYMP----LIVSPSQGIVPAPGWNTYMGNI----GPLSPTSIA 215
++ L+ L Q+ +P ++++ S + G++ + ++ GP++
Sbjct: 312 FNHPDRLVLNFPLPLGQTILPTPESMLLNSSANFMQ--GFDFHAAHMPVGPGPVTYPQRP 369
Query: 216 GSNL--IYSSRNQGDLGAGAQMH-------------------ILSASSQNLPERPDQPDC 254
G+ + Y + H + + LP R D C
Sbjct: 370 GATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVC 429
Query: 255 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
+YM TG CK+G CKF HP + A + SN G
Sbjct: 430 AFYMKTGVCKFGMQCKFDHPPPQEAIAKVSNSG 462
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 38/146 (26%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE--------------------- 276
L A S LP RP +P C +Y TG CK+ A CKF+HPK+
Sbjct: 200 LIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETD 259
Query: 277 ------------RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---Y 321
+ +AA GLP RPG+ C Y G CKFG TCRF+HP
Sbjct: 260 IGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLV 319
Query: 322 AGYPINYGLSLPPLSILDSSLMNHQA 347
+P+ G ++ P +S L+N A
Sbjct: 320 LNFPLPLGQTILPTP--ESMLLNSSA 343
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-----QSAASNIGPLGLP 292
L +S P+RP + DC +YM T TCK+G CKF HP+ A+N+ P
Sbjct: 97 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEE-SYP 155
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ G+ C + G CKFG C+F+HP
Sbjct: 156 EQQGEPDCPFFMKTGKCKFGSKCKFNHP 183
>gi|115438594|ref|NP_001043577.1| Os01g0616400 [Oryza sativa Japonica Group]
gi|54290411|dbj|BAD61281.1| zinc finger protein 3-like [Oryza sativa Japonica Group]
gi|113533108|dbj|BAF05491.1| Os01g0616400 [Oryza sativa Japonica Group]
gi|215767326|dbj|BAG99554.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618856|gb|EEE54988.1| hypothetical protein OsJ_02611 [Oryza sativa Japonica Group]
Length = 461
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 154/347 (44%), Gaps = 71/347 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG--------AQYREELPERNGQPDC 95
YP RPGE DC FY T C +G +C+F+HP + +G A E PE+ G+PDC
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEESYPEQEGEPDC 161
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGA---GPVSFNIL-----GLPMRQDEKSCPYYMRTG 147
+++KTG CK+GS CK++HPK++ A G + L LP+R E C +Y +TG
Sbjct: 162 PFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTG 221
Query: 148 --SFLPSSGLQYAGSLPTWSLQRAPYLSSRLQG----------TQSYMPLIVSPSQ---- 191
F + + S Q P + ++G + M V+ +Q
Sbjct: 222 KCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNS 281
Query: 192 -GIVPAPG-----WNTYMGNIG-------------------PLSPTSIAG--SNLIYSSR 224
G+ PG + MG+ PL T + S L+ SS
Sbjct: 282 KGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSA 341
Query: 225 N--QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 282
N QG A M + P+RP C +YM TG CK+ CKFHHP +R A
Sbjct: 342 NFMQGFDFHAAHMPV-GPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDP 400
Query: 283 ASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++N P GLP R +C+ Y G+CKFG C+FDHP
Sbjct: 401 SANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 447
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 131/329 (39%), Gaps = 85/329 (25%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREE-- 85
+E V ++ YP + GEPDC F+ +TG C +GS C+FNHP A A+ +
Sbjct: 143 KEAANVEES--YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIA 200
Query: 86 ----LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR----------------------N 119
LP R +P C +Y KTG CK+ + CK++HPKD +
Sbjct: 201 DSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGS 260
Query: 120 GAGPVS------------FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQ 167
A VS FN GLPMR E CP F G GS ++
Sbjct: 261 AADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCP-------FYMKMGSCKFGSTCRFNHP 313
Query: 168 RAPYLSSRLQGTQSYMP----LIVSPSQGIVPAPGWNTYMGNI----GPLSPTSIAGSNL 219
L+ L Q+ +P ++++ S + G++ + ++ GP++ G+ +
Sbjct: 314 DRLVLNFPLPLGQTILPTPESMLLNSSANFMQ--GFDFHAAHMPVGPGPVTYPQRPGATV 371
Query: 220 --IYSSRNQGDLGAGAQMH-------------------ILSASSQNLPERPDQPDCRYYM 258
Y + H + + LP R D C +YM
Sbjct: 372 CDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYM 431
Query: 259 NTGTCKYGADCKFHHPKERIAQSAASNIG 287
TG CK+G CKF HP + A + SN G
Sbjct: 432 KTGVCKFGMQCKFDHPPPQEAIAKVSNSG 460
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 38/146 (26%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE--------------------- 276
L A S LP RP +P C +Y TG CK+ A CKF+HPK+
Sbjct: 198 LIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETD 257
Query: 277 ------------RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---Y 321
+ +AA GLP RPG+ C Y G CKFG TCRF+HP
Sbjct: 258 IGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLV 317
Query: 322 AGYPINYGLSLPPLSILDSSLMNHQA 347
+P+ G ++ P +S L+N A
Sbjct: 318 LNFPLPLGQTILPTP--ESMLLNSSA 341
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-----QSAASNIGPLGLP 292
L +S P+RP + DC +YM T TCK+G CKF HP+ A+N+ P
Sbjct: 95 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEE-SYP 153
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ G+ C + G CKFG C+F+HP
Sbjct: 154 EQEGEPDCPFFMKTGKCKFGSKCKFNHP 181
>gi|205688147|sp|Q5ZDJ6.2|C3H8_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 8;
Short=OsC3H8
gi|54290410|dbj|BAD61280.1| zinc finger protein 3-like [Oryza sativa Japonica Group]
gi|215767138|dbj|BAG99366.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 462
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 154/348 (44%), Gaps = 72/348 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG---------AQYREELPERNGQPD 94
YP RPGE DC FY T C +G +C+F+HP + +G A E PE+ G+PD
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGA---GPVSFNIL-----GLPMRQDEKSCPYYMRT 146
C +++KTG CK+GS CK++HPK++ A G + L LP+R E C +Y +T
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKT 221
Query: 147 G--SFLPSSGLQYAGSLPTWSLQRAPYLSSRLQG----------TQSYMPLIVSPSQ--- 191
G F + + S Q P + ++G + M V+ +Q
Sbjct: 222 GKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFN 281
Query: 192 --GIVPAPG-----WNTYMGNIG-------------------PLSPTSIAG--SNLIYSS 223
G+ PG + MG+ PL T + S L+ SS
Sbjct: 282 SKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSS 341
Query: 224 RN--QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 281
N QG A M + P+RP C +YM TG CK+ CKFHHP +R A
Sbjct: 342 ANFMQGFDFHAAHMPV-GPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPD 400
Query: 282 AASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++N P GLP R +C+ Y G+CKFG C+FDHP
Sbjct: 401 PSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 126/318 (39%), Gaps = 83/318 (26%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREE------LPERNGQ 92
YP + GEPDC F+ +TG C +GS C+FNHP A A+ + LP R +
Sbjct: 153 YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSE 212
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDR----------------------NGAGPVS----- 125
P C +Y KTG CK+ + CK++HPKD + A VS
Sbjct: 213 PLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQT 272
Query: 126 -------FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQG 178
FN GLPMR E CP F G GS ++ L+ L
Sbjct: 273 PVAAAQEFNSKGLPMRPGEVDCP-------FYMKMGSCKFGSTCRFNHPDRLVLNFPLPL 325
Query: 179 TQSYMP----LIVSPSQGIVPAPGWNTYMGNI----GPLSPTSIAGSNL--IYSSRNQGD 228
Q+ +P ++++ S + G++ + ++ GP++ G+ + Y
Sbjct: 326 GQTILPTPESMLLNSSANFMQ--GFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCK 383
Query: 229 LGAGAQMH-------------------ILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 269
+ H + + LP R D C +YM TG CK+G C
Sbjct: 384 FADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQC 443
Query: 270 KFHHPKERIAQSAASNIG 287
KF HP + A + SN G
Sbjct: 444 KFDHPPPQEAIAKVSNSG 461
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 97/259 (37%), Gaps = 62/259 (23%)
Query: 132 PMRQDEKSCPYYM--RTGSFLPSSGLQY-----AGSLPTWSLQRAPYLSSRLQGTQSYMP 184
P R EK C +YM RT F S + G +P W Q A +SY
Sbjct: 103 PQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAA-------NVEESY-- 153
Query: 185 LIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 244
P Q P + G S N N G H++ A S
Sbjct: 154 ----PEQEGEPD---CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLI-ADSSI 205
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE---------------------------- 276
LP RP +P C +Y TG CK+ A CKF+HPK+
Sbjct: 206 LPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADS 265
Query: 277 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---YAGYPINY 328
+ +AA GLP RPG+ C Y G CKFG TCRF+HP +P+
Sbjct: 266 VSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPL 325
Query: 329 GLSLPPLSILDSSLMNHQA 347
G ++ P +S L+N A
Sbjct: 326 GQTILPTP--ESMLLNSSA 342
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 65/152 (42%), Gaps = 41/152 (26%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----------------------- 74
+A +S P RP EP C FY +TG C + + C+FNHP
Sbjct: 200 IADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDI 259
Query: 75 --------------YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-- 118
AA + LP R G+ DC +Y+K G+CK+GSTC+++HP DR
Sbjct: 260 GSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHP-DRLV 318
Query: 119 -NGAGPVSFNILGLPMRQDEKSCPYYMRTGSF 149
N P+ IL P S +M+ F
Sbjct: 319 LNFPLPLGQTILPTPESMLLNSSANFMQGFDF 350
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP-----------KERIAQSAASNI 286
L +S P+RP + DC +YM T TCK+G CKF HP KE+ A S
Sbjct: 95 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEES-- 152
Query: 287 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P + G+ C + G CKFG C+F+HP
Sbjct: 153 ----YPEQEGEPDCPFFMKTGKCKFGSKCKFNHP 182
>gi|326489471|dbj|BAK01716.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 141/307 (45%), Gaps = 42/307 (13%)
Query: 69 RFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH---PKDRNGAGPVS 125
+FN +E + E Q +C YY G CK+G +C+Y H + + V
Sbjct: 175 KFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVE 234
Query: 126 FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR---------L 176
N LGLP+R K CPYYMRTGS ++ ++ PT + R P L
Sbjct: 235 LNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQ 294
Query: 177 QGTQSYMPLI------------------------VSPSQGIVPAPGWNTY-MGNIGPLSP 211
+Q +PL + P +G+ P+ W+ Y +GP
Sbjct: 295 ASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVPLGPYYT 354
Query: 212 TSIAGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 270
I+ + N GA Q H S PERP +P+C++++ +G CK+ CK
Sbjct: 355 PGISFHHFPAPPVNHPMYRGADVQGH-QELPSDEYPERPGEPECQHFVKSGFCKFKVKCK 413
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYG 329
+HHP+ + A PLGLP RP Q +C+ Y YG+CKFGP C ++HP+ G+P++
Sbjct: 414 YHHPRSLVPPPTARAFSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVS-- 471
Query: 330 LSLPPLS 336
+ PPLS
Sbjct: 472 AAGPPLS 478
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
+ A R P+R+ +PDC YYLK GTC++G CK++HP +
Sbjct: 82 VETADSRPRFPQRHAEPDCTYYLKFGTCRFGMKCKFNHPARKK 124
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 214 IAGSNLIYSSRNQGDLGAGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFH 272
IAGS+ G++ G + +A S+ P+R +PDC YY+ GTC++G CKF+
Sbjct: 64 IAGSD-----ETTGEITGGKVQPVETADSRPRFPQRHAEPDCTYYLKFGTCRFGMKCKFN 118
Query: 273 HPKER 277
HP +
Sbjct: 119 HPARK 123
>gi|357478675|ref|XP_003609623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510678|gb|AES91820.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 582
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 166/374 (44%), Gaps = 79/374 (21%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP RP E DC++Y RTG CGYGS CRFNHP A+ E PER GQP C YY +
Sbjct: 43 YPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYAR 102
Query: 101 TGTCKYGSTCKYHHPKDRNGAG-PVSFNILGLPMRQDEKSCPYYMRTGSFL--------- 150
TG+CK+G++CKYHHP+ G PVS N G P+R EK C YY++TG
Sbjct: 103 TGSCKFGASCKYHHPRQAAGTTPPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHH 162
Query: 151 --PSSGLQYAGS---------LPTWS--------------------LQRAPYL-SSRLQG 178
P+ G A S +P S + R P L S +QG
Sbjct: 163 PQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQPPSGPSQQQYGVLVARPPLLHGSFVQG 222
Query: 179 TQSYMPLIVSPSQGIVPAPGWNTYMGNIG-PLSPTS---IAGSNLIYSSRNQGDLGAGAQ 234
Y P+++SP+ +VP GW+ Y G P+ P+S GS +Y
Sbjct: 223 --PYGPMVMSPT--MVPFSGWSPYQAPAGSPVLPSSNPLSVGSTQLYGITQLPSPTTAYT 278
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG---- 290
++ P + P Y ++G P QS+ + GP G
Sbjct: 279 QLPSPTTAYTGPYQSSGPSAGPYQSSG------------PSAGPYQSSGPSTGPSGSSQK 326
Query: 291 ---LPSRPGQAICSNYSMYGICKFGPTCRFDH-PYAGYP-INY---GLSLPPLSILDSSL 342
LP RP Q C +Y G CKFG TCR+ H P G P +N GL L PL + L
Sbjct: 327 EHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDMGAPKVNLSPIGLPLRPLMLFRCIL 386
Query: 343 MNHQAISATHSIET 356
++ A + H I T
Sbjct: 387 LH--ASTKPHIILT 398
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
++ P+RPD+ DC YY+ TG C YG+ C+F+HP++R A A+ I P R GQ +C
Sbjct: 41 ESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIA-GEYPERVGQPVCQY 99
Query: 303 YSMYGICKFGPTCRFDHP 320
Y+ G CKFG +C++ HP
Sbjct: 100 YARTGSCKFGASCKYHHP 117
>gi|215767260|dbj|BAG99488.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 237
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 107/193 (55%), Gaps = 20/193 (10%)
Query: 152 SSGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS 210
++G Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S
Sbjct: 18 TAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPVS 75
Query: 211 PTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN-------------LPERPDQPD 253
+ G+ Y + Q D AG Q + S + PERPDQP+
Sbjct: 76 SSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 135
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+YYM TG CK+GA CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG
Sbjct: 136 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 195
Query: 314 TCRFDHPYAGYPI 326
C+FDHP P+
Sbjct: 196 NCKFDHPTMAPPM 208
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 73 PAYAAQGAQYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILG 130
P YA Q RE + PER QP+C YY+KTG CK+G+ CK+HHP+ R+ P + +G
Sbjct: 117 PQYALQ----RENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVG 172
Query: 131 LPMRQDEKSCPYYMRTG 147
LP+R E+ C +Y R G
Sbjct: 173 LPLRPGEELCKFYSRYG 189
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RP +P+C +Y +TG C +G+ C+F+HP + LP R G+ C +Y
Sbjct: 127 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYS 186
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CK+G+ CK+ HP
Sbjct: 187 RYGICKFGANCKFDHP 202
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
P RPGE C FY R G+C +G+NC+F+HP A
Sbjct: 174 PLRPGEELCKFYSRYGICKFGANCKFDHPTMA 205
>gi|224101283|ref|XP_002312214.1| predicted protein [Populus trichocarpa]
gi|222852034|gb|EEE89581.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 137/325 (42%), Gaps = 83/325 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----------QYREELPERNGQP 93
YP RPGE DC +Y T C +G C+F+HP + +G E P+R G P
Sbjct: 151 YPQRPGEKDCAYYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPPIATSETFPDRPGVP 210
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSFLP 151
DC Y+LKT CKYG CK++HPK++ G VS N I LP R E C +YM+T
Sbjct: 211 DCPYFLKTQRCKYGLNCKFNHPKEKMSLG-VSENTSISALPERPSEPPCAFYMKT----- 264
Query: 152 SSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 211
G+ G+ T + L G GN +
Sbjct: 265 --GICKFGA--TCKFHHPKDIQISLAG------------------------QGNDDGVQT 296
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
S+ + I N +L +S+ LP RP + DC +Y+ TG+CKYGA C++
Sbjct: 297 NSVVDNGGITGDVNVIKALVSVTPALLH-NSKGLPMRPGEVDCPFYLKTGSCKYGATCRY 355
Query: 272 HHPKER-------------IAQSAAS-----------------------NIGPLGLPSRP 295
+HP+ IA S A+ +GP P RP
Sbjct: 356 NHPERTAINPPAAAIGHPIIAPSMANLNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQRP 415
Query: 296 GQAICSNYSMYGICKFGPTCRFDHP 320
GQA C Y G CKFG TC+F HP
Sbjct: 416 GQAECDFYMKTGECKFGETCKFHHP 440
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 129/293 (44%), Gaps = 71/293 (24%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYRE 84
I D +E +A + +P RPG PDC ++ +T C YG NC+FNHP +
Sbjct: 188 IPDWKEVPPIATSETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHPKEKMSLGVSENTSIS 247
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD--------------------RNGAGPV 124
LPER +P C +Y+KTG CK+G+TCK+HHPKD NG
Sbjct: 248 ALPERPSEPPCAFYMKTGICKFGATCKFHHPKDIQISLAGQGNDDGVQTNSVVDNGGITG 307
Query: 125 SFNIL---------------GLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRA 169
N++ GLPMR E CP+Y++TGS + +Y
Sbjct: 308 DVNVIKALVSVTPALLHNSKGLPMRPGEVDCPFYLKTGSCKYGATCRY----------NH 357
Query: 170 PYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL 229
P ++ + I++PS + N+G SP A S L
Sbjct: 358 PERTAINPPAAAIGHPIIAPSMANL----------NLGVFSP---AASIYQTIDPRLSTL 404
Query: 230 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 282
G G ++ P+RP Q +C +YM TG CK+G CKFHHP +R A +A
Sbjct: 405 GVGPTVY---------PQRPGQAECDFYMKTGECKFGETCKFHHPIDRSAPTA 448
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 47/138 (34%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------------AYAA 77
P RPGE DC FY +TG C YG+ CR+NHP ++
Sbjct: 330 PMRPGEVDCPFYLKTGSCKYGATCRYNHPERTAINPPAAAIGHPIIAPSMANLNLGVFSP 389
Query: 78 QGAQYRE-------------ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP- 123
+ Y+ P+R GQ +C +Y+KTG CK+G TCK+HHP DR+
Sbjct: 390 AASIYQTIDPRLSTLGVGPTVYPQRPGQAECDFYMKTGECKFGETCKFHHPIDRSAPTAK 449
Query: 124 ------VSFNILGLPMRQ 135
V + GLP R+
Sbjct: 450 QTEPQTVKLTLAGLPRRE 467
>gi|357154781|ref|XP_003576899.1| PREDICTED: zinc finger CCCH domain-containing protein 65-like
[Brachypodium distachyon]
Length = 524
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 141/303 (46%), Gaps = 60/303 (19%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHP--KDRNG-AGPVSFNILGLPMRQDEKS 139
R+ + E + Q +C YY G CK+G +CKY HP K+R V N LGLP+R K
Sbjct: 212 RDTVSEGSAQEECKYYKTFGGCKFGKSCKYLHPGGKERKAEVEEVELNFLGLPIRPGGKE 271
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR---------LQG------------ 178
C YYMRTGS ++ ++ PT R P L +QG
Sbjct: 272 CQYYMRTGSCRYATNCRFHHPDPTNVASREPVLEHENGGDIPQQNVQGPSQPNVSIWPAD 331
Query: 179 ----TQSYMPLI---------------VSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL 219
+ + P + + P QG+ P P W+ Y + PLSP G+
Sbjct: 332 QRTLNEHHAPFLAPAPSYSAGMIPPQGMIPPQGMYPTPEWSGY--HQVPLSPYYPPGTPF 389
Query: 220 IY----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
+ +Q GA H S PERP QP+C++++ +G CK+G CK+HHP+
Sbjct: 390 HHFPGPPVNHQIYRGADVPGH-QQLPSDEYPERPGQPECQHFVKSGYCKFGVKCKYHHPR 448
Query: 276 ERIAQSA-----ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 330
+ + A + PLGLP +P Q +C+ Y YG+CK+GP C ++HP+ N+G
Sbjct: 449 SLMPRPPPPPPQAGTLSPLGLPLKPDQPVCTYYGRYGVCKYGPACLYNHPF-----NFGH 503
Query: 331 SLP 333
+P
Sbjct: 504 PVP 506
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPD 94
YP RPG+P+C + ++G C +G C+++HP G LP + QP
Sbjct: 418 YPERPGQPECQHFVKSGYCKFGVKCKYHHPRSLMPRPPPPPPQAGTLSPLGLPLKPDQPV 477
Query: 95 CGYYLKTGTCKYGSTCKYHHP 115
C YY + G CKYG C Y+HP
Sbjct: 478 CTYYGRYGVCKYGPACLYNHP 498
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
+S S P RP +PDC YY+ GTC++G CKF+HP R
Sbjct: 84 VSDSGPRFPRRPAEPDCTYYIRFGTCRFGMKCKFNHPARR 123
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+P RP EPDC +Y R G C +G C+FNHPA
Sbjct: 91 FPRRPAEPDCTYYIRFGTCRFGMKCKFNHPA 121
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
P R +PDC YY++ GTC++G CK++HP R
Sbjct: 91 FPRRPAEPDCTYYIRFGTCRFGMKCKFNHPARRK 124
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 280 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++A S+ GP P RP + C+ Y +G C+FG C+F+HP
Sbjct: 81 KAAVSDSGPR-FPRRPAEPDCTYYIRFGTCRFGMKCKFNHP 120
>gi|413950620|gb|AFW83269.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 308
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 133/311 (42%), Gaps = 82/311 (26%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV------------------SFNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + + + N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP 195
E C +YM+TGS +Y GS+ ++ P G + + +V Q +P
Sbjct: 136 GEVDCSFYMKTGS------CKY-GSICRFNHPDRP-------GPAADIAFMVPLVQATLP 181
Query: 196 APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 255
+ P+ P + +IY P+RP + C
Sbjct: 182 SS---------APIVPAVVEPLPMIY------------------------PQRPGETVCD 208
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGP------LGLPSRPGQAICSNYSMYGIC 309
+YM TG+CKY CKFHHP R A + N P LP R C+ Y G+C
Sbjct: 209 FYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMC 268
Query: 310 KFGPTCRFDHP 320
+FG C+FDHP
Sbjct: 269 RFGAHCKFDHP 279
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 43/154 (27%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI-------- 128
A + LP R G+ DC +Y+KTG+CKYGS C+++HP A ++F +
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLP 181
Query: 129 --------------LGLPMRQDEKSCPYYMRTGS 148
+ P R E C +YM+TGS
Sbjct: 182 SSAPIVPAVVEPLPMIYPQRPGETVCDFYMKTGS 215
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 98/260 (37%), Gaps = 68/260 (26%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
PER G+PDC Y L CK+ S CK++HPKD N LG T
Sbjct: 18 PERPGEPDCPYLL-NNRCKFKSKCKFNHPKDM-------VNALG---------------T 54
Query: 147 GSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI 206
G+ + L + +P+ S + A G I
Sbjct: 55 GT-----------------------NNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAI 91
Query: 207 GPLS-PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 265
+ P I S LI A + +++ LP R + DC +YM TG+CKY
Sbjct: 92 CKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKY 151
Query: 266 GADCKFHHPKER-----------IAQS----------AASNIGPLGLPSRPGQAICSNYS 304
G+ C+F+HP + Q+ A P+ P RPG+ +C Y
Sbjct: 152 GSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGETVCDFYM 211
Query: 305 MYGICKFGPTCRFDHPYAGY 324
G CK+ C+F HP + +
Sbjct: 212 KTGSCKYSQKCKFHHPISRF 231
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 IWRLKIHDNQEGG--GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
I R H + G A + P R C FY R+G+C +G++C+F+HP
Sbjct: 228 ISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 279
>gi|255635495|gb|ACU18099.1| unknown [Glycine max]
Length = 235
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 128/240 (53%), Gaps = 57/240 (23%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W L + GGV YP RPG P+C++Y RTG+CGYG CRFNHP A A
Sbjct: 1 MWHLTL------GGVES---YPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAVAAAV 51
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDE 137
+ + PER G+P C YYLKTGTCK+G++CK+HHPK NG G +S NI G P+R E
Sbjct: 52 RATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLSQAPLNIYGYPLRLGE 109
Query: 138 KSCPYYMRT-----------------GSFLPSSG---------------LQYAGSLPTWS 165
K C YY++T G+ LP+S QY G+ +
Sbjct: 110 KECSYYLKTGQCKFGISCKFHHPQPAGTSLPTSAPQFYQQVQSPTVPLPEQYGGASTSLR 169
Query: 166 LQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPTS--IAGSNLIY 221
+ R P L S +QG +Y P+++SP G+V PGW+ Y + P LSP + + G+ +Y
Sbjct: 170 VARPPVLPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVLSPGTQPVVGATSLY 225
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R G+ CS Y
Sbjct: 56 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRLGEKECSYY 115
Query: 304 SMYGICKFGPTCRFDHP 320
G CKFG +C+F HP
Sbjct: 116 LKTGQCKFGISCKFHHP 132
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
H+ ++ PERP P+C YYM TG C YG C+F+HP++R A +AA P R
Sbjct: 3 HLTLGGVESYPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAVAAAVRAT-GDYPERV 61
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPYAG 323
G+ C Y G CKFG +C+F HP G
Sbjct: 62 GEPPCQYYLKTGTCKFGASCKFHHPKNG 89
>gi|297790312|ref|XP_002863055.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308861|gb|EFH39314.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 253
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 134/272 (49%), Gaps = 45/272 (16%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-----PERNGQPDCGYYLKTGTCKYGST 109
FY +TG C +G++C+F+HP A G+ L P R G +C YYLKTG CK+G T
Sbjct: 1 FYLKTGTCKFGASCKFHHPKNAG-GSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGIT 59
Query: 110 CKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRA 169
CK+HHP+ +P + +Y S +P QY G + + R
Sbjct: 60 CKFHHPQPAGTT---------VPPPPPASAPQFYPSVQSLMPD---QYGGPSSSLRVART 107
Query: 170 PYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI------GPLSP------------ 211
S +QG +Y P++++P G+VP PGW+ Y P+SP
Sbjct: 108 LLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSSLSDSLLLQAPVSPALSPGAQHAVGA 163
Query: 212 TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 269
TS+ G + S+ G + + + Q PERP +P+C+YY+ TG CK+G C
Sbjct: 164 TSLYGVTQLSSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSC 223
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICS 301
KFHHP++R+ A + P+GLP RP +CS
Sbjct: 224 KFHHPRDRVPPRANCILSPIGLPLRP---VCS 252
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 37/65 (56%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 315
+Y+ TGTCK+GA CKFHHPK + G P R G CS Y G CKFG TC
Sbjct: 1 FYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITC 60
Query: 316 RFDHP 320
+F HP
Sbjct: 61 KFHHP 65
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 9/54 (16%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPER 89
G + + +P RPGEP+C +Y +TG C +G++C+F+HP R+ +P R
Sbjct: 191 GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP---------RDRVPPR 235
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 28 KIHDNQEGGGVAQASP-----YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K H + GG P YP R G+ +C +Y +TG C +G C+F+HP
Sbjct: 15 KFHHPKNAGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP 65
>gi|295913574|gb|ADG58033.1| transcription factor [Lycoris longituba]
Length = 146
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 99/152 (65%), Gaps = 13/152 (8%)
Query: 159 GSLPTWSLQRAPYLSS-RLQGTQSYMPLIV-SPSQGIVPAP-GWNTYMGNIGPLSPTSIA 215
G L W L R PYL + R+QG +Y+P+I+ PSQG +P W+TY G++ L T +
Sbjct: 5 GGLSAWPLAR-PYLPNPRMQGLSAYVPVILPQPSQGAMPMQQSWSTYTGSVSQLPSTDVR 63
Query: 216 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
G I + + G G S+++ NLPERPDQP+C+YYM TG+CKYG +CK+HHPK
Sbjct: 64 GHAQIPNMKLHGHSG--------SSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPK 115
Query: 276 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
E +S + +GPLGLP RPG AIC+ Y+MYG
Sbjct: 116 ESYTESPFT-LGPLGLPLRPGHAICTFYTMYG 146
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 71 NHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
N + G+ LPER QP+C YY+KTG+CKYG+ CKYHHPK+ P + LG
Sbjct: 70 NMKLHGHSGSSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPKESYTESPFTLGPLG 129
Query: 131 LPMRQDEKSCPYYMRTG 147
LP+R C +Y G
Sbjct: 130 LPLRPGHAICTFYTMYG 146
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
I +K+H + G + P RP +P+C +Y +TG C YG+NC+++HP + + +
Sbjct: 68 IPNMKLHGHS---GSSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPKESYTESPFT 124
Query: 84 ---EELPERNGQPDCGYYLKTG 102
LP R G C +Y G
Sbjct: 125 LGPLGLPLRPGHAICTFYTMYG 146
>gi|125525255|gb|EAY73369.1| hypothetical protein OsI_01247 [Oryza sativa Indica Group]
Length = 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 138/266 (51%), Gaps = 41/266 (15%)
Query: 90 NGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSF 149
G+ +C YY+KTG CK+G+TCK+HHP+ G P++ I P++ + P+
Sbjct: 2 QGEKECSYYMKTGQCKFGTTCKFHHPE--FGGVPMNPGIY-PPLQSPSIASPH------- 51
Query: 150 LPSSGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP 208
YA SL W + R P + S + G SY P+++S G++P GW+ Y ++ P
Sbjct: 52 ------PYA-SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNP 100
Query: 209 LSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQP 252
+ + A N+ +Y + G G + S++ Q+ PERP QP
Sbjct: 101 VV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQP 159
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
DC+YYM TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G
Sbjct: 160 DCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYG 219
Query: 313 PTCRFDHPYAGYPINYGLSLPPLSIL 338
C++DHP + Y S PLS +
Sbjct: 220 VACKYDHPMGT--LGYSPSALPLSDM 243
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 152 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 211
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 212 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 245
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
Q PER GQPDC YY++TG CK+G+TCKYHHP++ + N L LP+R +
Sbjct: 147 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 206
Query: 140 CPYYMRTG 147
C YY + G
Sbjct: 207 CAYYAQNG 214
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
GE +C +Y +TG C +G+ C+F+HP +
Sbjct: 3 GEKECSYYMKTGQCKFGTTCKFHHPEFGG 31
>gi|326521656|dbj|BAK00404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1431
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 131/302 (43%), Gaps = 69/302 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP RPG +C F+ R G C + S C+++HP + Q PER G+PDC +Y++ G
Sbjct: 1099 YPERPGRQECPFFARYGDCKFASACKYHHPKQSKDKEQVN--YPERPGRPDCPFYMRFGD 1156
Query: 104 CKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPT 163
CK+ S C YHHPKD+ GLP +E CP+YM+ G ++
Sbjct: 1157 CKFASACNYHHPKDKYPT--------GLP---EEPECPFYMKRGF------CKFGAQCKF 1199
Query: 164 WSLQRA-PYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPT-----SIAGS 217
+ + A P + S S PS I P + P P S+
Sbjct: 1200 YHPEDANPTMQSPTDAKISVTMDEHHPSTRITPE--------DHVPQQPQYPERRSVTTD 1251
Query: 218 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPD------QPDCRYYMNTGTCKYGADCKF 271
+ S+R + + LP++P QPDCRYYM G CKY + C F
Sbjct: 1252 DHHPSTR---------------ITPEVLPQQPQYPERPGQPDCRYYMQFGKCKYLSACIF 1296
Query: 272 HHPKERIAQ-------SAASNIGPL--GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
HHPK+R+A + + IGP G+P C Y G C+FG C F HP
Sbjct: 1297 HHPKDRLAAMWSPSDPAHSDQIGPKIHGMPD------CPFYMKSGKCQFGSLCEFRHPKD 1350
Query: 323 GY 324
Y
Sbjct: 1351 IY 1352
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 131/310 (42%), Gaps = 65/310 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP RPG PDC FY R G C + S C ++HP +Y LPE +P+C +Y+K G
Sbjct: 1139 YPERPGRPDCPFYMRFGDCKFASACNYHHPK-----DKYPTGLPE---EPECPFYMKRGF 1190
Query: 104 CKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPT 163
CK+G+ CK++HP+D N P Q + PS+ + +P
Sbjct: 1191 CKFGAQCKFYHPEDAN------------PTMQSPTDAKISVTMDEHHPSTRITPEDHVP- 1237
Query: 164 WSLQRAPYLSSRLQGTQSYMPLI-----VSPSQGIVPA----PGWNTYM--GNIGPLSPT 212
Q+ Y R T + P V P Q P P YM G LS
Sbjct: 1238 ---QQPQYPERRSVTTDDHHPSTRITPEVLPQQPQYPERPGQPDCRYYMQFGKCKYLS-- 1292
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
+ + + +++ L A + S Q P+ PDC +YM +G C++G+ C+F
Sbjct: 1293 ----ACIFHHPKDR--LAAMWSPSDPAHSDQIGPKIHGMPDCPFYMKSGKCQFGSLCEFR 1346
Query: 273 HPK-----------ERIAQSAASNI-----------GPLGLPSRPGQAICSNYSMYGICK 310
HPK ER A ++ G + P RPG+ C++Y G CK
Sbjct: 1347 HPKDIYSTTEEAFGERTGSGAYDSLTRSDNGVEQQEGSVMYPERPGEPECAHYMRQGYCK 1406
Query: 311 FGPTCRFDHP 320
F C++ HP
Sbjct: 1407 FQMNCKYHHP 1416
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 111/293 (37%), Gaps = 107/293 (36%)
Query: 48 PGEPDCLFYRRTGLCGYGSNCRFNHPA-------------------------------YA 76
P EP+C FY + G C +G+ C+F HP +
Sbjct: 1177 PEEPECPFYMKRGFCKFGAQCKFYHPEDANPTMQSPTDAKISVTMDEHHPSTRITPEDHV 1236
Query: 77 AQGAQYRE------------------------ELPERNGQPDCGYYLKTGTCKYGSTCKY 112
Q QY E + PER GQPDC YY++ G CKY S C +
Sbjct: 1237 PQQPQYPERRSVTTDDHHPSTRITPEVLPQQPQYPERPGQPDCRYYMQFGKCKYLSACIF 1296
Query: 113 HHPKDRNGA-----GPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQ 167
HHPKDR A P + +G P CP+YM++G Q+ GSL +
Sbjct: 1297 HHPKDRLAAMWSPSDPAHSDQIG-PKIHGMPDCPFYMKSGK------CQF-GSLCEFRHP 1348
Query: 168 RAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQG 227
+ Y ++ A G T G Y S +
Sbjct: 1349 KDIYSTTE-------------------EAFGERTGSG---------------AYDSLTRS 1374
Query: 228 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 280
D G Q S PERP +P+C +YM G CK+ +CK+HHP +R+++
Sbjct: 1375 DNGVEQQ-----EGSVMYPERPGEPECAHYMRQGYCKFQMNCKYHHPGDRLSK 1422
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
N PERP +PDC +YM G CK+ + C +HHPK++ P GLP P C Y
Sbjct: 1138 NYPERPGRPDCPFYMRFGDCKFASACNYHHPKDKY---------PTGLPEEPE---CPFY 1185
Query: 304 SMYGICKFGPTCRFDHPYAGYP 325
G CKFG C+F HP P
Sbjct: 1186 MKRGFCKFGAQCKFYHPEDANP 1207
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 26/105 (24%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREEL---------------- 86
P G PDC FY ++G C +GS C F HP Y+ + E
Sbjct: 1320 PKIHGMPDCPFYMKSGKCQFGSLCEFRHPKDIYSTTEEAFGERTGSGAYDSLTRSDNGVE 1379
Query: 87 --------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
PER G+P+C +Y++ G CK+ CKYHHP DR P
Sbjct: 1380 QQEGSVMYPERPGEPECAHYMRQGYCKFQMNCKYHHPGDRLSKKP 1424
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
+ PERP + +C ++ G CK+ + CK+HHPK+ + + + P RPG+ C Y
Sbjct: 1098 DYPERPGRQECPFFARYGDCKFASACKYHHPKQ------SKDKEQVNYPERPGRPDCPFY 1151
Query: 304 SMYGICKFGPTCRFDHPYAGYP 325
+G CKF C + HP YP
Sbjct: 1152 MRFGDCKFASACNYHHPKDKYP 1173
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-------------PKERIAQSAAS-- 284
A ++ P++P + +C YM+ GTC YG C F+H P ER AA
Sbjct: 837 APARRYPQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPSERRDHGAAEIL 896
Query: 285 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP------PLSIL 338
+ LGLP R G C Y G C++G C F+HP + I+ S P L
Sbjct: 897 ELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP--DHVIDARFSSPTGWEDNALETE 954
Query: 339 DSSLMNHQAISATHSIETSPDAS-SKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKV 397
SS +H A+H + S DA+ + + ++SD V++ ++ K+S DD S +
Sbjct: 955 KSS--DHALTEASHMKKASDDATLNDRSHLKKSSDGVTLDDRSHLNKSSDNATLDDRSHL 1012
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY------------------AAQGA 80
A A YP +P + +C Y G C YG +C FNHP AA+
Sbjct: 837 APARRYPQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPSERRDHGAAEIL 896
Query: 81 QY-REELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
+ R LP R G +C YY++TG C+YG C ++HP
Sbjct: 897 ELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP 932
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 20/95 (21%)
Query: 70 FNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP-------------- 115
N Y A +Y P++ + +C Y+ GTC YG +C ++HP
Sbjct: 830 VNKEKYRAPARRY----PQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPS 885
Query: 116 --KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGS 148
+D A + N LGLP+R+ ++C YYMRTG+
Sbjct: 886 ERRDHGAAEILELNRLGLPIREGARNCDYYMRTGA 920
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
A +N + + D GA IL + LP R +C YYM TG C+YG +C F+HP
Sbjct: 876 AKTNDSWRPSERRDHGAAE---ILELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP 932
Query: 275 KERIAQSAASNIG 287
I +S G
Sbjct: 933 DHVIDARFSSPTG 945
>gi|11994409|dbj|BAB02411.1| zinc finger protein-like [Arabidopsis thaliana]
Length = 326
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 130/283 (45%), Gaps = 72/283 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 39 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 98
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMR- 134
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 99 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 158
Query: 135 --QDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQG 192
Q E CP+Y++TGS +Y + +R +++P +
Sbjct: 159 LFQGEVDCPFYLKTGS------CKYGATCRYNHPERT-----------AFIPQAAGVNYS 201
Query: 193 IVPAPGWNTYMGNIGPLSPTSIAGSNLI----YSSRNQGDLGAGAQMH----ILSASSQN 244
+V + NT N+G ++P + L Y + G + H LSA ++
Sbjct: 202 LVSS---NTANLNLGLVTPATSFYQTLTQPTYYMKTGECKFGERCKFHHPADRLSAMTKQ 258
Query: 245 LPERPDQP-------------DCRYYMNTGTCKYGADCKFHHP 274
P++P+ +C YYM TGTCKYGA CKF HP
Sbjct: 259 APQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 301
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 145/353 (41%), Gaps = 83/353 (23%)
Query: 58 RTGLCGYGSNCRFNHPAYAAQG---------AQYREELPERNGQPDCGYYLKTGTCKYGS 108
+T C +G +CRF+HP + +G EE PER G+PDC YY+KT CKYGS
Sbjct: 2 QTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGS 61
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSF---------------LPSS 153
CK++HP++ + + LP R E C +YM+TG LPSS
Sbjct: 62 KCKFNHPREEAAVSVETQD--SLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSS 119
Query: 154 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG------ 207
S+ L P ++ T + P + S+G+ P + + G +
Sbjct: 120 SQDIGSSV---GLTSEPDATNNPHVT--FTPALYHNSKGL---PVRSLFQGEVDCPFYLK 171
Query: 208 --------------PLSPTSI---AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPD 250
P I AG N S N +L G L + + +
Sbjct: 172 TGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLG-----LVTPATSFYQTLT 226
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNY 303
QP YYM TG CK+G CKFHHP +R++ Q + G P R G C Y
Sbjct: 227 QPT--YYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYY 284
Query: 304 SMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIET 356
G CK+G TC+FDHP PP ++ + A AT++ T
Sbjct: 285 MKTGTCKYGATCKFDHP------------PPGEVMAKTTSEADAAGATNTDTT 325
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 258 MNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAICSNYSMYGICKFG 312
M T TCK+G C+F H P+ I + + P P RPG+ C Y CK+G
Sbjct: 1 MQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYG 60
Query: 313 PTCRFDHP 320
C+F+HP
Sbjct: 61 SKCKFNHP 68
>gi|357135532|ref|XP_003569363.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Brachypodium distachyon]
Length = 479
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 145/381 (38%), Gaps = 136/381 (35%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA--------QYREELPERNGQPDC 95
YP RPGE DC FY RT C YG C+F+HP + +G + E PER G+PDC
Sbjct: 98 YPQRPGEKDCAFYMRTRTCMYGEGCKFDHPQWVPEGGIPNWKEAPKDEESYPERPGEPDC 157
Query: 96 GYYLKT---------------------------------------------------GTC 104
+++KT G C
Sbjct: 158 PFFMKTRRCGFASKCKFNHPKEKVNVTVAGTGNKGSQISESSISPVKPSEPCPFFPKGKC 217
Query: 105 KYGSTCKYHHPKD---------------RNGAG---------------PVS--FNILGLP 132
K+G+ CK+ H KD AG PV+ N G+P
Sbjct: 218 KFGTNCKFSHAKDIEVPSSGHESKSTATVEAAGHNIAASDSVSAKKLTPVAQEHNSKGMP 277
Query: 133 MRQDEKSCPYYMRTGSFLPSSGLQY---AGSLPTWSLQRAPYLSSRLQGTQSYMPL-IVS 188
+R E C +Y++TGS + S ++ P L + T S +P+ +++
Sbjct: 278 IRPGEVDCSFYIKTGSCMYGSTCRFNHPERHHPVLDFPLVAPLGQSILPTSSVVPVEMLN 337
Query: 189 PSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 248
+ +P ++ + ++ P+ P IA P+R
Sbjct: 338 RATNFLP--NFDFHATHV-PIEPEPIA-----------------------------YPQR 365
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP---------LGLPSRPGQAI 299
P + C +YM TG CK+ CKFHHP +R A + ++ P GLP R +
Sbjct: 366 PGETVCDFYMKTGFCKFSEKCKFHHPVDRSASAPVASTEPRQKSVTLTLAGLPRREDAEV 425
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
CS Y G CKFG C+FDHP
Sbjct: 426 CSFYMKTGTCKFGVQCKFDHP 446
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 121/299 (40%), Gaps = 75/299 (25%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA------------------- 74
+G ++++S P +P EP C F+ + G C +G+NC+F+H
Sbjct: 191 KGSQISESSISPVKPSEP-CPFFPK-GKCKFGTNCKFSHAKDIEVPSSGHESKSTATVEA 248
Query: 75 ----YAAQGAQYREEL------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
AA + ++L P R G+ DC +Y+KTG+C YGSTC+++HP+
Sbjct: 249 AGHNIAASDSVSAKKLTPVAQEHNSKGMPIRPGEVDCSFYIKTGSCMYGSTCRFNHPERH 308
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQG 178
+ PV L P+ Q S LP+S + +P L RA
Sbjct: 309 H---PVLDFPLVAPLGQ------------SILPTSSV-----VPVEMLNRATNFLPNFDF 348
Query: 179 TQSYMPL----IVSPSQ------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGD 228
+++P+ I P + G+ + P + S + S+
Sbjct: 349 HATHVPIEPEPIAYPQRPGETVCDFYMKTGFCKFSEKCKFHHPVDRSASAPVASTE---- 404
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
+ ++ + LP R D C +YM TGTCK+G CKF HP A + S G
Sbjct: 405 ----PRQKSVTLTLAGLPRREDAEVCSFYMKTGTCKFGVQCKFDHPPPEEAIAKVSKQG 459
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 64/284 (22%)
Query: 132 PMRQDEKSCPYYMRTGSFLPSSGLQY-------AGSLPTWSLQRAPYLSSRLQGTQSYMP 184
P R EK C +YMRT + + G ++ G +P W + AP + +SY
Sbjct: 99 PQRPGEKDCAFYMRTRTCMYGEGCKFDHPQWVPEGGIPNW--KEAP------KDEESY-- 148
Query: 185 LIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 244
P + P + G S N N G G + +S SS +
Sbjct: 149 ----PERPGEPDCPFFMKTRRCGFASKCKF---NHPKEKVNVTVAGTGNKGSQISESSIS 201
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE---------------------RIAQS-- 281
P +P +P C ++ G CK+G +CKF H K+ IA S
Sbjct: 202 -PVKPSEP-CPFFPK-GKCKFGTNCKFSHAKDIEVPSSGHESKSTATVEAAGHNIAASDS 258
Query: 282 -AASNIGPL-------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 333
+A + P+ G+P RPG+ CS Y G C +G TCRF+HP +P+ L P
Sbjct: 259 VSAKKLTPVAQEHNSKGMPIRPGEVDCSFYIKTGSCMYGSTCRFNHPERHHPV---LDFP 315
Query: 334 PLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQ 377
++ L S++ S+ +E A++ +PN+ ++ V ++
Sbjct: 316 LVAPLGQSIL---PTSSVVPVEMLNRATNFLPNFDFHATHVPIE 356
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
+++ S +YSS + A+ + +S P+RP + DC +YM T TC YG CKF
Sbjct: 71 STMGQSEALYSSNSM------AKRPRVESSLPIYPQRPGEKDCAFYMRTRTCMYGEGCKF 124
Query: 272 HHPKERIAQSAASNIGPL-----GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
HP + + + N P RPG+ C + C F C+F+HP
Sbjct: 125 DHP-QWVPEGGIPNWKEAPKDEESYPERPGEPDCPFFMKTRRCGFASKCKFNHP 177
>gi|218198268|gb|EEC80695.1| hypothetical protein OsI_23121 [Oryza sativa Indica Group]
Length = 217
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 113/229 (49%), Gaps = 42/229 (18%)
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGS 148
R + +C YYL+TG CK+ STCK+HHP+ N V ++ Y S
Sbjct: 2 RPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSM--------------YSPGQS 47
Query: 149 FLPSSGLQYAGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI 206
Y G++ W+L R A +++S R G Y P+IV QG+V PGWN Y +
Sbjct: 48 ATSPGQHTYPGAVTNWTLSRSASFIASPRWPGHSGYAPVIVP--QGLVQVPGWNPYAAQM 105
Query: 207 GPLSP-------------------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-P 246
G SP T G + +Y S G + G + + +N+ P
Sbjct: 106 GSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFP 161
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
ERPDQP+C++YM TG CK+GA CKFHHPKER+ + + LGLP RP
Sbjct: 162 ERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRP 210
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLP 132
Y QG PER QP+C +Y+KTG CK+G+ CK+HHPK+R P + N LGLP
Sbjct: 151 VYTVQGENI---FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLP 207
Query: 133 MR 134
+R
Sbjct: 208 LR 209
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P RP +P+C FY +TG C +G+ C+F+HP
Sbjct: 160 FPERPDQPECQFYMKTGDCKFGAVCKFHHP 189
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHP 73
RP E +C +Y RTG C + S C+F+HP
Sbjct: 2 RPNEKECAYYLRTGQCKFASTCKFHHP 28
>gi|293335701|ref|NP_001169053.1| uncharacterized protein LOC100382893 [Zea mays]
gi|223974689|gb|ACN31532.1| unknown [Zea mays]
Length = 462
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 140/331 (42%), Gaps = 86/331 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA--QYREEL------PERNGQPDC 95
YP RPG+ DC FY TG C YG C+F+HP + +G ++E L PER G+PDC
Sbjct: 106 YPQRPGQKDCAFYMSTGTCKYGETCKFDHPQWVPEGGVPNWKEVLNDEDYYPERPGEPDC 165
Query: 96 GYYLKTGTCKYGSTCKYHHPKD-------RNGAGPVSFNILGLPMRQDEKSCPYYMRTGS 148
Y L + CK+ S CK++HPK+ R + + LP+R E C +Y +TG
Sbjct: 166 PYLL-SSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGK 224
Query: 149 FLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP 208
+ ++ + P + P L ++ Y
Sbjct: 225 CKFGAVCKF--NHPKLEDIKTPSLIAK-----------------------ETIYRATTD- 258
Query: 209 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 268
+ I G++ ++ + A A+ H +++ LP RP + DC +YM TG+CKYG+
Sbjct: 259 -AAAHIGGTDDSVPAKTHAPI-APAEAH----NAKGLPIRPGEVDCSFYMKTGSCKYGSI 312
Query: 269 CKFHHPKERIAQSA-----------------------ASNI---------------GPLG 290
C+F+HP + A A+N P+
Sbjct: 313 CRFNHPDRSVVDIAFMAPVQATLPFPAPIVPAVALNPAANFLQSFDFHATHVPVEPMPMI 372
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
P RPG+ +C Y G CK+ C+F HP+
Sbjct: 373 YPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 403
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 137/335 (40%), Gaps = 92/335 (27%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE----------LPERNGQP 93
YP RPGEPDC Y + C + S C+FNHP R + LP R +P
Sbjct: 156 YPERPGEPDCP-YLLSSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEP 214
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV----------------------------- 124
C +Y KTG CK+G+ CK++HPK + P
Sbjct: 215 VCSFYAKTGKCKFGAVCKFNHPKLEDIKTPSLIAKETIYRATTDAAAHIGGTDDSVPAKT 274
Query: 125 --------SFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRL 176
+ N GLP+R E C +YM+TGS S ++ + P S+ +++ +
Sbjct: 275 HAPIAPAEAHNAKGLPIRPGEVDCSFYMKTGSCKYGSICRF--NHPDRSVVDIAFMAP-V 331
Query: 177 QGTQSYMPLIVSPSQGIVPAPGW---NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGA 233
Q T + P + P+ + PA + + P+ P +IY
Sbjct: 332 QATLPF-PAPIVPAVALNPAANFLQSFDFHATHVPVEPMP-----MIY------------ 373
Query: 234 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-------- 285
P+RP + C +YM TG+CKY +CKFHHP +R A + N
Sbjct: 374 ------------PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVA 421
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ GLP R C+ Y G C FG C+FDHP
Sbjct: 422 LTLAGLPRREDAEACAFYMRSGTCGFGARCKFDHP 456
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 212 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 271
+++ S +YSS A+ L +S P+RP Q DC +YM+TGTCKYG CKF
Sbjct: 79 STVGQSETLYSSITM------AKRPRLESSLPIYPQRPGQKDCAFYMSTGTCKYGETCKF 132
Query: 272 HHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
HP + + + N + P RPG+ C Y + CKF C+F+HP
Sbjct: 133 DHP-QWVPEGGVPNWKEVLNDEDYYPERPGEPDCP-YLLSSRCKFKSKCKFNHP 184
>gi|219888781|gb|ACL54765.1| unknown [Zea mays]
gi|414879021|tpg|DAA56152.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 192
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ D+ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMDS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R
Sbjct: 107 ASARMKGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLR 164
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 230 GAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASN 285
G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 52 GMWQQMAMDSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARM 111
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 112 KG--EYPERAGQPECQYYLKTGTCKFGPTCKFHHP 144
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
PER G+PDC YYL+TG C++G +C+++HP DRN A + P R + C YY++T
Sbjct: 71 PERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARMKGEYPERAGQPECQYYLKT 130
Query: 147 GS 148
G+
Sbjct: 131 GT 132
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + G P RP
Sbjct: 116 PERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRP 165
>gi|413950617|gb|AFW83266.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 333
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 133/336 (39%), Gaps = 107/336 (31%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DC-------------------------GYYLKTGTCKYGSTCKYHHPKDRNGAGPVS--- 125
C +Y KTG CK+G+ CK++HPKD + ++
Sbjct: 76 ICVVRSYIAVIFFFSWHSPSFLGCPVFQFYAKTGKCKFGAICKFNHPKDIKTSPLIAKET 135
Query: 126 ---------------FNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAP 170
N GLP+RQ E C +YM+TGS +Y GS+ ++ P
Sbjct: 136 IYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGS------CKY-GSICRFNHPDRP 188
Query: 171 YLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 230
G + + +V Q +P+ P+ P + +IY
Sbjct: 189 -------GPAADIAFMVPLVQATLPSSA---------PIVPAVVEPLPMIY--------- 223
Query: 231 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP-- 288
P+RP + C +YM TG+CKY CKFHHP R A + N P
Sbjct: 224 ---------------PQRPGETVCDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQ 268
Query: 289 ----LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP R C+ Y G+C+FG C+FDHP
Sbjct: 269 PATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 304
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 108/267 (40%), Gaps = 57/267 (21%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN---GAGPVSFNILG----LPMRQDEKS 139
PER G+PDC Y L CK+ S CK++HPKD G G + +++ LP+R E
Sbjct: 18 PERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGW 199
C +R+ Y + +S +L + Q Y A
Sbjct: 77 C--VVRS----------YIAVIFFFSWHSPSFLGCPV--FQFY-------------AKTG 109
Query: 200 NTYMGNIGPLS-PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYM 258
G I + P I S LI A + +++ LP R + DC +YM
Sbjct: 110 KCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEVDCSFYM 169
Query: 259 NTGTCKYGADCKFHHPKE-----------RIAQS----------AASNIGPLGLPSRPGQ 297
TG+CKYG+ C+F+HP + Q+ A P+ P RPG+
Sbjct: 170 KTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGE 229
Query: 298 AICSNYSMYGICKFGPTCRFDHPYAGY 324
+C Y G CK+ C+F HP + +
Sbjct: 230 TVCDFYMKTGSCKYSQKCKFHHPISRF 256
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 72/179 (40%), Gaps = 68/179 (37%)
Query: 38 VAQASPYPARPGEPDCL-------------------------FYRRTGLCGYGSNCRFNH 72
+A ++ P RP EP C+ FY +TG C +G+ C+FNH
Sbjct: 62 IADSAVLPVRPSEPICVVRSYIAVIFFFSWHSPSFLGCPVFQFYAKTGKCKFGAICKFNH 121
Query: 73 P---------------------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
P A A A + LP R G+ DC +Y+KTG+CKYGS C+
Sbjct: 122 PKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICR 181
Query: 112 YHHPKDRNGAGPVSFNI----------------------LGLPMRQDEKSCPYYMRTGS 148
++HP A ++F + + P R E C +YM+TGS
Sbjct: 182 FNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGETVCDFYMKTGS 240
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 IWRLKIHDNQEGG--GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
I R H + G A + P R C FY R+G+C +G++C+F+HP
Sbjct: 253 ISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 304
>gi|388519213|gb|AFK47668.1| unknown [Medicago truncatula]
Length = 455
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 93/189 (49%), Gaps = 32/189 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-------AAQGAQYREELPERNGQPDCG 96
+P RP DC FY +TG C +G NC+FNHP + + REE E GQ +C
Sbjct: 231 FPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECK 290
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYMRTGSFL----- 150
YY ++G CK+G CKY+H R P+S N LGLP+R E+ CPYYMRTGS
Sbjct: 291 YYQRSGGCKFGKACKYNHS--RGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNC 348
Query: 151 --------------PSSGLQYAGSLPTWSLQRAPY--LSSRLQGTQSYMPLIVSPSQGIV 194
P SG GS+ + + P SSR + PL+ +P+QG+
Sbjct: 349 RFNHPDPTTVGGSDPQSGYGNGGSVSLRGVSQQPVASWSSRKLNETPFAPLMPTPTQGLA 408
Query: 195 P-APGWNTY 202
P WN Y
Sbjct: 409 PQTSDWNGY 417
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSR-P 295
S + P RP+ DC +YM TG+CK+G +CKF+HP R Q+ A + P
Sbjct: 225 SDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENA 284
Query: 296 GQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYG 329
GQ C Y G CKFG C+++H + G PI G
Sbjct: 285 GQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLG 329
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
LP R + +C YYM TG+CK+G++C+F+HP
Sbjct: 324 LPIRLGERECPYYMRTGSCKFGSNCRFNHP 353
>gi|413947008|gb|AFW79657.1| hypothetical protein ZEAMMB73_788382 [Zea mays]
Length = 239
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 109/224 (48%), Gaps = 43/224 (19%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
Query: 74 -----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
G E PER GQP C YY K GTCK+GS CK+ HP++ +G PV+ N
Sbjct: 68 RDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-SGFVPVALNN 126
Query: 129 LGLPMRQDEKSCPYYMRTG---------------SFLPSSGLQYAGSLPT---------- 163
G P+R EK C YYM+TG FL + Y P+
Sbjct: 127 SGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPELGFLTETPGMYPPVQPSPISSPHPYPH 186
Query: 164 ---WSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYM 203
W + R + S L G Y P+++ P+ ++P GWN Y+
Sbjct: 187 HSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPYV 226
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCTYYLRTGACGYGERCRYN 65
Query: 273 HPKERIA-QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
HP++R A + + P RPGQ +C Y+ G CKFG C+FDHP
Sbjct: 66 HPRDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHP 114
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 237 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 296
+ + PERP QP C YY GTCK+G++CKF HP+E A N G P R G
Sbjct: 77 VGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLG 134
Query: 297 QAICSNYSMYGICKFGPTCRFDHPYAGY 324
+ CS Y G CKFG TC+F HP G+
Sbjct: 135 EKECSYYMKTGHCKFGGTCKFHHPELGF 162
>gi|414876870|tpg|DAA54001.1| TPA: hypothetical protein ZEAMMB73_676626 [Zea mays]
Length = 269
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 98/196 (50%), Gaps = 35/196 (17%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA + PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QYFPERQGQPVC 116
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGL 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG S
Sbjct: 117 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTC 176
Query: 156 QY----AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 211
++ G +P + R+ ++ Y LI S AP WN + + PLS
Sbjct: 177 KFHHPEFGGIP---VTRSSWI--------IYSRLIHSNG-----APIWNGSIARMEPLSG 220
Query: 212 T----SIAGSNLIYSS 223
T SI S YSS
Sbjct: 221 TGKSCSIRWSTTNYSS 236
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 224 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 282
R + G GA+ + ++Q PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 90 RGGTEFGGGAK----NGAAQYFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 145
Query: 283 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPIN 327
N G P RPG+ CS Y G CKFG TC+F HP + G P+
Sbjct: 146 ILNNN--GFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVT 189
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 301
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQYFPERQGQPVCE 117
Query: 302 NYSMYGICKFGPTCRFDHP 320
Y G CKFG C++ HP
Sbjct: 118 YYLKTGTCKFGSNCKYHHP 136
>gi|168037437|ref|XP_001771210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677451|gb|EDQ63921.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 130/318 (40%), Gaps = 94/318 (29%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--------LPERNGQPDC 95
YP RPG+ C +Y T C +G CR++HPA G Q LP+R +PDC
Sbjct: 1 YPQRPGQKVCAYYMATRTCSFGVTCRYDHPA-CGTGGQVTAVGTPVDPCLLPQRPAEPDC 59
Query: 96 GYYLKTGTCKYGSTCKYHHPKDR-----------------NGAGPVSFNILGLPMR---- 134
Y++KTG C+YG C+++HPK++ G ++N GLP+R
Sbjct: 60 AYFMKTGECRYGPQCRFNHPKEKLEPSNTDDQYSAASSAAFGNPATAYNTNGLPLRPVTC 119
Query: 135 ----QDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPS 190
Q E +C +Y +TGS +Y + P LS R+Q + + P
Sbjct: 120 ARDVQGEGNCVFYGKTGSCKHGPACRY--NHPEI------LLSMRMQLDNNLSVKKIIPM 171
Query: 191 QGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPD 250
Q LS + G + NQ
Sbjct: 172 Q-----------------LSRSLETGQSTCTQQSNQDKF--------------------- 193
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSA---ASNIGPL-----GLPSRPGQAICSN 302
Y+ TG C +GA CKFHHP +RI A N G + GLP R +A C+
Sbjct: 194 ------YIKTGECSFGATCKFHHPPDRIPTGIPKPAKNQGLVKLSLAGLPRRETEAPCAY 247
Query: 303 YSMYGICKFGPTCRFDHP 320
Y G CKFG TC++DHP
Sbjct: 248 YMKTGACKFGQTCKYDHP 265
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
P RPGQ +C+ Y C FG TCR+DHP G
Sbjct: 2 PQRPGQKVCAYYMATRTCSFGVTCRYDHPACG 33
>gi|449485416|ref|XP_004157161.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 220
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 221 YSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 279
++ R+ LG+ + + +N+ PERP QP+C++YM TG CK+GA C+FHHP+ER+
Sbjct: 53 FAIRSTDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVL 112
Query: 280 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 327
+ + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 113 PAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN 160
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 81 QYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEK 138
Q RE + PER GQP+C +Y+KTG CK+G+ C++HHP++R P + +GLP+R E
Sbjct: 72 QTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPGEP 131
Query: 139 SCPYYMRTG--SFLPSSGLQYAGSLPTWSLQRAPYLSSRLQ---GTQSYMPLIVSPSQGI 193
C +Y R G F PS + + T++L A ++ +Q GT S + S+G+
Sbjct: 132 LCIFYSRYGICKFGPSCKFDHPMGIFTYNLSAASSANAPVQHLFGTSSGTTALNLSSEGL 191
Query: 194 VPA 196
V A
Sbjct: 192 VEA 194
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C FY +TG C +G+ CRF+HP A LP R G+P C +Y
Sbjct: 78 FPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPGEPLCIFYS 137
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CK+G +CK+ HP
Sbjct: 138 RYGICKFGPSCKFDHP 153
>gi|108862478|gb|ABG21959.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 488
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 42/261 (16%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 230 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 289
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGTQS---------- 181
CPYYMRTGS ++ ++ P+ + P L +QG+ S
Sbjct: 290 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 349
Query: 182 ------YMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 225
++P I + P QG+ P P WN Y + P P + + + N
Sbjct: 350 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 409
Query: 226 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 410 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 467
Query: 286 IGPLGLPSRPGQAICSNYSMY 306
+ PLGLP +P +CS + ++
Sbjct: 468 LSPLGLPIKP---VCSFFHLF 485
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y G
Sbjct: 239 QEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGS 298
Query: 309 CKFGPTCRFDHP 320
CK+ C+F HP
Sbjct: 299 CKYATNCKFHHP 310
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
NHP Y A G Q EE PER GQP+C +++K+G CK+ CKYHHP R+ P
Sbjct: 408 INHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHP--RSPVPPA 465
Query: 125 -SFNILGLPMR 134
+ + LGLP++
Sbjct: 466 GALSPLGLPIK 476
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+P RPGEPDC +Y + G C +G C+FNHPA
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPA 135
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 282 PLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C + C+++HP
Sbjct: 429 YPERPGQPECQHFVKSGFCKFRMKCKYHHP 458
>gi|242033337|ref|XP_002464063.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
gi|241917917|gb|EER91061.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
Length = 1390
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/281 (28%), Positives = 117/281 (41%), Gaps = 92/281 (32%)
Query: 28 KIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQ------ 81
+ H +E + YP RPGEP+C FY +TG C +G+NC+F+HP A Q
Sbjct: 1173 RYHPKKEPALSGELMVYPDRPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQGPASPK 1232
Query: 82 ---------------------YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+++ PER GQPDC YY++ G CK+ S C ++HPK +G
Sbjct: 1233 RSVAANEHHPAARTTLQDQMYQQQKYPERPGQPDCRYYMQFGKCKFESACIFNHPKLSSG 1292
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQ 180
CP+YM+TGS S ++
Sbjct: 1293 --------------WHLAECPFYMKTGSCQFGSACEF----------------------- 1315
Query: 181 SYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSA 240
Y P + PS+G V I G++ G A ++L
Sbjct: 1316 -YHPKVRCPSRGGV-------------------IDGTDY-------GHDFATKSQNVLQQ 1348
Query: 241 SSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 280
Q + PERP + +C +YM G CK+ +CKFHHP++R+ +
Sbjct: 1349 HEQAIYPERPGELECPHYMKHGYCKFQMNCKFHHPRDRLPK 1389
Score = 112 bits (279), Expect = 4e-22, Method: Composition-based stats.
Identities = 94/366 (25%), Positives = 129/366 (35%), Gaps = 142/366 (38%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ-----------------------GA 80
YP RPG+ +C FY TG C YGS+C FNHP A+ G
Sbjct: 1026 YPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNRVGL 1085
Query: 81 QYREE------------------------------LPERNGQPDCGYYLKTGTCKYGSTC 110
RE+ PER P+C + L+ G C++GS+C
Sbjct: 1086 PIREDPDWASASDDSDGCCSADSSDGPLCKQEHGGYPER---PECPFLLRFGNCRFGSSC 1142
Query: 111 KYHHPKDRNGAG--------------------------PVSFNILGLPMRQDEKSCPYYM 144
+Y+HPKD+ + +S ++ P R E CP+Y+
Sbjct: 1143 QYYHPKDKVSSTYHPKDKFQSRYHPKEKSSRYHPKKEPALSGELMVYPDRPGEPECPFYV 1202
Query: 145 RTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMG 204
+TGS + ++ + P ++PS
Sbjct: 1203 KTGSCKFGANCKF------------------------HHPKDIAPSMQ------------ 1226
Query: 205 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 264
GP SP +N + A + Q PERP QPDCRYYM G CK
Sbjct: 1227 --GPASPKRSVAAN-------EHHPAARTTLQDQMYQQQKYPERPGQPDCRYYMQFGKCK 1277
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 324
+ + C F+HPK L S A C Y G C+FG C F HP
Sbjct: 1278 FESACIFNHPK---------------LSSGWHLAECPFYMKTGSCQFGSACEFYHPKVRC 1322
Query: 325 PINYGL 330
P G+
Sbjct: 1323 PSRGGV 1328
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---------------AASNIGP----- 288
P++P+C + + G C++G+ C+++HPK++++ + +S P
Sbjct: 1122 PERPECPFLLRFGNCRFGSSCQYYHPKDKVSSTYHPKDKFQSRYHPKEKSSRYHPKKEPA 1181
Query: 289 -----LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
+ P RPG+ C Y G CKFG C+F HP P G + P S+
Sbjct: 1182 LSGELMVYPDRPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQGPASPKRSV 1235
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 52/128 (40%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ--------------------- 280
S+ P+RP + +CR+YM+TG+C YG+ C F+HP+ +
Sbjct: 1023 SEGYPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNR 1082
Query: 281 ----------------------SAASNIGPL------GLPSRPGQAICSNYSMYGICKFG 312
SA S+ GPL G P RP C +G C+FG
Sbjct: 1083 VGLPIREDPDWASASDDSDGCCSADSSDGPLCKQEHGGYPERPE---CPFLLRFGNCRFG 1139
Query: 313 PTCRFDHP 320
+C++ HP
Sbjct: 1140 SSCQYYHP 1147
Score = 42.0 bits (97), Expect = 0.58, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 9/46 (19%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPER 89
YP RPGE +C Y + G C + NC+F+HP R+ LP++
Sbjct: 1354 YPERPGELECPHYMKHGYCKFQMNCKFHHP---------RDRLPKK 1390
>gi|414881850|tpg|DAA58981.1| TPA: hypothetical protein ZEAMMB73_531605 [Zea mays]
Length = 310
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 128/324 (39%), Gaps = 91/324 (28%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREE----------LPERNGQPDCGYYLKTGTC 104
Y + C + S C+FNHP R + LP R +P C +Y KTG C
Sbjct: 14 IYLLSSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKC 73
Query: 105 KYGSTCKYHHPKDRNGAGPV-------------------------------------SFN 127
K+G+ CK++HPK + P + N
Sbjct: 74 KFGAVCKFNHPKLEDIKTPSLIAKETIYRATTDAAAHIGGTDDSVPAKTHAPIAPAEAHN 133
Query: 128 ILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIV 187
GLP+R E C +YM+TGS S ++ + P S+ +++ +Q T + P +
Sbjct: 134 AKGLPIRPGEVDCSFYMKTGSCKYGSICRF--NHPDRSVVDIAFMAP-VQATLPF-PAPI 189
Query: 188 SPSQGIVPAPGW---NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 244
P+ + PA + + P+ P +IY
Sbjct: 190 VPAVALNPAANFLQSFDFHATHVPVEPMP-----MIY----------------------- 221
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPG 296
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 222 -PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRRED 280
Query: 297 QAICSNYSMYGICKFGPTCRFDHP 320
C+ Y G C FG C+FDHP
Sbjct: 281 AEACAFYMRSGTCGFGARCKFDHP 304
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 73/155 (47%), Gaps = 51/155 (32%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-------AYAA-------------------Q 78
P RPGE DC FY +TG C YGS CRFNHP A+ A
Sbjct: 138 PIRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMAPVQATLPFPAPIVPAVALNP 197
Query: 79 GAQYREEL----------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-- 120
A + + P+R G+ C +Y+KTG+CKY CK+HHP DR+
Sbjct: 198 AANFLQSFDFHATHVPVEPMPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPH 257
Query: 121 -------AGPVSFNILGLPMRQDEKSCPYYMRTGS 148
PV+ + GLP R+D ++C +YMR+G+
Sbjct: 258 SKENEDTQQPVALTLAGLPRREDAEACAFYMRSGT 292
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 77/269 (28%)
Query: 98 YLKTGTCKYGSTCKYHHPKD-------RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFL 150
YL + CK+ S CK++HPK+ R + + LP+R E C +Y +TG
Sbjct: 15 YLLSSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKCK 74
Query: 151 PSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS 210
+ ++ + P + P L ++ Y +
Sbjct: 75 FGAVCKF--NHPKLEDIKTPSLIAK-----------------------ETIYRATTD--A 107
Query: 211 PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 270
I G++ ++ + A A+ H +++ LP RP + DC +YM TG+CKYG+ C+
Sbjct: 108 AAHIGGTDDSVPAKTHAPI-APAEAH----NAKGLPIRPGEVDCSFYMKTGSCKYGSICR 162
Query: 271 FHHPKERIAQSA-----------------------ASNI---------------GPLGLP 292
F+HP + A A+N P+ P
Sbjct: 163 FNHPDRSVVDIAFMAPVQATLPFPAPIVPAVALNPAANFLQSFDFHATHVPVEPMPMIYP 222
Query: 293 SRPGQAICSNYSMYGICKFGPTCRFDHPY 321
RPG+ +C Y G CK+ C+F HP+
Sbjct: 223 QRPGEIVCDFYMKTGSCKYAQNCKFHHPF 251
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE-----------LPERNG 91
YP RPGE C FY +TG C Y NC+F+HP +A ++ E+ LP R
Sbjct: 221 YPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRRED 280
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y+++GTC +G+ CK+ HP
Sbjct: 281 AEACAFYMRSGTCGFGARCKFDHP 304
>gi|224035765|gb|ACN36958.1| unknown [Zea mays]
gi|413916354|gb|AFW56286.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 235
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 14/224 (6%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYA 158
++TG+CK+ + CK+HHP N S GL + P GS PS LQ
Sbjct: 1 MRTGSCKFATNCKFHHPDPTN----ASSKEPGL--EHENGDVPLQNVQGSSQPS--LQMW 52
Query: 159 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGS 217
+ Q P+L+ SY +V P QG+ P+ W+ Y + P P +
Sbjct: 53 PDQRALNEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPPGVPFP 107
Query: 218 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
+ + N A S PERP QP+C++++ +G CKY C++HHP+ R
Sbjct: 108 HFPAAHMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSR 167
Query: 278 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
+ + + P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 168 QSAPPPAGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 211
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 69 RFNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-G 122
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A
Sbjct: 113 HMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPP 172
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTG 147
P + +GLP++ D+ C YY R G
Sbjct: 173 PAGLSPIGLPIKPDQPVCTYYGRYG 197
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
YP RPG+P+C + ++G C Y CR++HP + LP + QP C YY
Sbjct: 135 YPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYG 194
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CKYG C ++HP
Sbjct: 195 RYGFCKYGPACMFNHP 210
>gi|224032243|gb|ACN35197.1| unknown [Zea mays]
Length = 429
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 36/249 (14%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 79 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 138
Query: 140 CPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSR--------LQGT------------ 179
CPYYMRTGS ++ ++ PT + + P L +QG+
Sbjct: 139 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 198
Query: 180 ---QSYMPLI---------VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 226
+ ++P + + P QG+ P+ W+ Y + P P + + + N
Sbjct: 199 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 258
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 259 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 318
Query: 287 GPLGLPSRP 295
P+GLP +P
Sbjct: 319 SPIGLPIKP 327
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSRPGQAICSNYSMYGI 308
Q +C+YY G CK+G CK+ H + ++ + + LGLP RPG+ C Y G
Sbjct: 88 QEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKECPYYMRTGS 147
Query: 309 CKFGPTCRFDHP 320
CKF C+F HP
Sbjct: 148 CKFATNCKFHHP 159
>gi|62318618|dbj|BAD95055.1| zinc finger protein 2 [Arabidopsis thaliana]
Length = 120
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 5/96 (5%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K+++ GV + +PYP RPGE DC FY RTG
Sbjct: 5 MSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDC 95
LCGYGS+CR+NHP + Q A Y+EELPER GQPDC
Sbjct: 61 LCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDC 96
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 208 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL---PERPDQPDCRYYMNTGTCK 264
P+S T S+L+ + A +M + + L P+RP + DC++Y+ TG C
Sbjct: 4 PMSDTQHVQSSLVSIRSSDKIEDAFRKMKVNETGVEELNPYPDRPGERDCQFYLRTGLCG 63
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 301
YG+ C+++HP + Q A LP R GQ C
Sbjct: 64 YGSSCRYNHPT-HLPQDVAYYKEE--LPERIGQPDCE 97
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 275 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
K ++ ++ + P P RPG+ C Y G+C +G +CR++HP
Sbjct: 30 KMKVNETGVEELNPY--PDRPGERDCQFYLRTGLCGYGSSCRYNHP 73
>gi|168000422|ref|XP_001752915.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696078|gb|EDQ82419.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PERP QP+C+YYM TG CK+G C++HHPK+R S ++ P+GLP RPG CS Y+
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 305 MYGICKFGPTCRFDH 319
YGICKFGPTC+FDH
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYM 144
PER GQP+C YY+KTG CK+G+TC+YHHPKDR P + +GLP+R C +Y
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 145 RTG 147
R G
Sbjct: 64 RYG 66
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE----LPERNGQPDCGYYL 99
+P RPG+P+C +Y +TG C +G+ CR++HP + LP R G C +Y
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 100 KTGTCKYGSTCKYHH 114
+ G CK+G TCK+ H
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPGQ C Y G CKFG TCR+ HP
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHP 33
>gi|302143643|emb|CBI22396.3| unnamed protein product [Vitis vinifera]
Length = 134
Score = 108 bits (269), Expect = 6e-21, Method: Composition-based stats.
Identities = 48/63 (76%), Positives = 51/63 (80%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYM 144
E ER GQPDCGYYLKT TCKYGS CKYHH +DR AGPVS NI+GL MRQ+EK C YYM
Sbjct: 19 EFLERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVSLNIVGLSMRQEEKPCSYYM 78
Query: 145 RTG 147
RTG
Sbjct: 79 RTG 81
Score = 75.5 bits (184), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
ER QPDC YY+ T TCKYG+ CK+HH ++R+ S + +GL R + CS Y
Sbjct: 22 ERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVS-LNIVGLSMRQEEKPCSYYMRT 80
Query: 307 GICKFGPTCRFDH 319
G+CKFG C+F H
Sbjct: 81 GLCKFGVACKFHH 93
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE---LPERNGQPD 94
V S + R G+PDC +Y +T C YGS C+++H L R +
Sbjct: 14 VDTISEFLERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVSLNIVGLSMRQEEKP 73
Query: 95 CGYYLKTGTCKYGSTCKYHH 114
C YY++TG CK+G CK+HH
Sbjct: 74 CSYYMRTGLCKFGVACKFHH 93
Score = 42.7 bits (99), Expect = 0.35, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 221 YSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
+ SR++ D G +S + L R ++ C YYM TG CK+G CKFHH
Sbjct: 47 HHSRDRLDAGP------VSLNIVGLSMRQEEKPCSYYMRTGLCKFGVACKFHH 93
Score = 39.3 bits (90), Expect = 3.4, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
R E C +Y RTGLC +G C+F+H A+ G YR
Sbjct: 68 RQEEKPCSYYMRTGLCKFGVACKFHHLQPASIGTGYR 104
>gi|414876864|tpg|DAA53995.1| TPA: hypothetical protein ZEAMMB73_505725 [Zea mays]
gi|414876865|tpg|DAA53996.1| TPA: hypothetical protein ZEAMMB73_505725 [Zea mays]
Length = 220
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PERP QP+C +YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYA 114
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKI 364
+G CKFGPTC+FDHP + P SI SSL + S +P +
Sbjct: 115 HHGYCKFGPTCKFDHP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----M 160
Query: 365 PNWVQNSD 372
P+++ +SD
Sbjct: 161 PSYLPSSD 168
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI---LGLPMRQDEKSCPY 142
PER GQP+C +Y+KTGTCKYG+ CKYHHP+ + GP S I LGLP+R + C Y
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFS--GPKSNCILSPLGLPLRPGSQPCAY 112
Query: 143 YMRTG--SFLPSSGLQYAGSLPTWSL 166
Y G F P+ + P +S+
Sbjct: 113 YAHHGYCKFGPTCKFDHPMGTPNYSI 138
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C Y +TG C YG+ C+++HP Y + LP R G C YY
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYA 114
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQ 156
G CK+G TCK+ HP + ++ +P+ +S P S+LPSS L+
Sbjct: 115 HHGYCKFGPTCKFDHPMGTPNYSISTSSLTDVPIAPYPQSFP-VTPMPSYLPSSDLR 170
>gi|168000222|ref|XP_001752815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695978|gb|EDQ82319.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PER QP+C+YYM TG CK+G C++HHPK+R S+ ++ +GLP RPG CS Y+
Sbjct: 4 FPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMGLPLRPGNPPCSFYT 63
Query: 305 MYGICKFGPTCRFDH 319
YGICKFGPTC+FDH
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYM 144
PER GQP+C YY+KTG CK+G+TC+YHHPKDR+ + + +GLP+R C +Y
Sbjct: 4 FPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMGLPLRPGNPPCSFYT 63
Query: 145 RTG 147
R G
Sbjct: 64 RYG 66
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----------YAAQGAQYREELPERNG 91
S +P R G+P+C +Y +TG C +G+ CR++HP +A G LP R G
Sbjct: 2 SLFPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMG------LPLRPG 55
Query: 92 QPDCGYYLKTGTCKYGSTCKYHH 114
P C +Y + G CK+G TCK+ H
Sbjct: 56 NPPCSFYTRYGICKFGPTCKFDH 78
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
S+ LP RP P C +Y G CK+G CKF H
Sbjct: 46 SAMGLPLRPGNPPCSFYTRYGICKFGPTCKFDH 78
>gi|222618134|gb|EEE54266.1| hypothetical protein OsJ_01160 [Oryza sativa Japonica Group]
Length = 182
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 17/104 (16%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
P RP QP+C+YY+ TG+CK+G+ CK+HHP+ + + PLGLP RPG C+ Y+
Sbjct: 12 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 71
Query: 305 MYGICKFGPTCRFDHPY-----------------AGYPINYGLS 331
+G CKFGPTC+FDHP A YP+NY ++
Sbjct: 72 QHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVA 115
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+PARPG+P+C +Y +TG C +GS C+++HP Y + LP R G C YY
Sbjct: 12 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 71
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G TCK+ HP P + +I LP+
Sbjct: 72 QHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPI 105
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYM 144
P R GQP+C YYLKTG+CK+GS CKYHHP+ N + LGLP+R + C YY
Sbjct: 12 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 71
Query: 145 RTG 147
+ G
Sbjct: 72 QHG 74
>gi|414872185|tpg|DAA50742.1| TPA: hypothetical protein ZEAMMB73_704527 [Zea mays]
Length = 741
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 109/267 (40%), Gaps = 100/267 (37%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---------------------YAAQGAQY 82
YP RP EPDC FY +TG C +G+NC+F+HP +AA A
Sbjct: 540 YPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRSVAAKEHHAAARATL 599
Query: 83 REEL------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG--PVSFNILGLPMR 134
++++ PER GQPDC YY++ G CK+ S C ++H KD +G P
Sbjct: 600 QDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSGWHPA---------- 649
Query: 135 QDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIV 194
CP+YM+T + S ++ Y P
Sbjct: 650 ----ECPFYMKTRTCQFGSACEF------------------------YHP---------- 671
Query: 195 PAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD- 253
+ G G + T G + SRN +L Q L P++PD
Sbjct: 672 ----KDRCSGRGGVIDGTDY-GHDFATKSRN-----------VL----QELAIYPERPDE 711
Query: 254 --CRYYMNTGTCKYGADCKFHHPKERI 278
C +YM G CKY +CKFHHP++R+
Sbjct: 712 LECSHYMKHGYCKYKMNCKFHHPRDRL 738
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 150/394 (38%), Gaps = 85/394 (21%)
Query: 6 QVKSNAVANQSADNIEEAIWRLKIHDNQ---EGGGVAQASPYPARPGEPDCLFYRRTGLC 62
Q + AV ++D + + D + E G+++ YP +PG+ +C FY TG C
Sbjct: 242 QDQDEAVEQCTSDQLRTITDGNDVEDQEVHREKVGLSEG--YPQKPGKLNCRFYMSTGRC 299
Query: 63 GYGSNCRFNHPAYAAQ-------------GAQY----REELPERNGQPDCGYYLKTGTCK 105
YGS+C FNHP A+ A++ R LP R G C YY++ GTC+
Sbjct: 300 SYGSSCHFNHPRLKAKLEVSSFPSEQRNHEAEFLELNRVGLPIREGARKCIYYMRNGTCR 359
Query: 106 YGSTCKYHHPK---DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLP 162
YG C ++HP+ D ++ L K P + SSG + LP
Sbjct: 360 YGKKCCFNHPEQVLDVQRHTATGWDDTNLQSSPHSKKSPEHKTMDDI--SSGSEV---LP 414
Query: 163 TWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYS 222
P + L Q+ P I P W S
Sbjct: 415 -------PNILRMLLPPQNVPPSTKEKEIRIKKDPDW---------------------AS 446
Query: 223 SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI---- 278
+ + D A Q + P++P+C + + G CK+ + C+++HPK++
Sbjct: 447 ASDDSDGCCSADSSDGPLCKQEHEDYPERPECPFLLRFGNCKFASSCQYYHPKDKFPSTY 506
Query: 279 -----------AQSAASNIGP----------LGLPSRPGQAICSNYSMYGICKFGPTCRF 317
+ +S P + P RP + C Y G CKFG C+F
Sbjct: 507 HPEDKFQSRYHQKEKSSRHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKF 566
Query: 318 DHPYAGYPINYGLSLPPLSILDSSLMNHQAISAT 351
HP P G + P S+ ++ +H A AT
Sbjct: 567 HHPKDITPNMQGPASPKRSV--AAKEHHAAARAT 598
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 117/321 (36%), Gaps = 124/321 (38%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR---------------------- 118
Q E+ PER P+C + L+ G CK+ S+C+Y+HPKD+
Sbjct: 467 QEHEDYPER---PECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSS 523
Query: 119 ----NGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSS 174
+S ++ P R E CP+Y++TGS + ++
Sbjct: 524 RHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKF----------------- 566
Query: 175 RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQ 234
+ P ++P+ GP SP + +++ A A
Sbjct: 567 -------HHPKDITPNMQ--------------GPASPKRSVAAKEHHAA-------ARAT 598
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTG--------------------------------- 261
+ Q PERP QPDCRYYM G
Sbjct: 599 LQDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSGWHPAECPFYMKTR 658
Query: 262 TCKYGADCKFHHPKER----------------IAQSAASNIGPLGL-PSRPGQAICSNYS 304
TC++G+ C+F+HPK+R A + + + L + P RP + CS+Y
Sbjct: 659 TCQFGSACEFYHPKDRCSGRGGVIDGTDYGHDFATKSRNVLQELAIYPERPDELECSHYM 718
Query: 305 MYGICKFGPTCRFDHPYAGYP 325
+G CK+ C+F HP P
Sbjct: 719 KHGYCKYKMNCKFHHPRDRLP 739
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + + YP RP E +C Y + G C Y NC+F+HP
Sbjct: 699 LQELAIYPERPDELECSHYMKHGYCKYKMNCKFHHP 734
>gi|295913205|gb|ADG57861.1| transcription factor [Lycoris longituba]
Length = 165
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 51/78 (65%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
Q PERP QP+C+Y+M TG CK+G CK+HHP E + GLP RPG C
Sbjct: 40 QTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQPCIF 99
Query: 303 YSMYGICKFGPTCRFDHP 320
Y+ +G+CKFGPTC+FDHP
Sbjct: 100 YAQHGVCKFGPTCKFDHP 117
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDC 95
Q +P RPG+P+C ++ RTG C +G C+++HP LP R G C
Sbjct: 38 QEQTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQPC 97
Query: 96 GYYLKTGTCKYGSTCKYHHP 115
+Y + G CK+G TCK+ HP
Sbjct: 98 IFYAQHGVCKFGPTCKFDHP 117
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD-RNGAGPVSFNILGLPMRQDEKS 139
Q + PER GQP+C Y+++TG CK+G TCKYHHP + R + GLP+R +
Sbjct: 37 QQEQTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQP 96
Query: 140 CPYYMRTG 147
C +Y + G
Sbjct: 97 CIFYAQHG 104
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
SS LP RP C +Y G CK+G CKF HP
Sbjct: 84 SSAGLPLRPGVQPCIFYAQHGVCKFGPTCKFDHP 117
>gi|217074532|gb|ACJ85626.1| unknown [Medicago truncatula]
Length = 162
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP--- 73
A ++ E++W L + GGG A YP R G P+C +Y RTG CGYG CRFNHP
Sbjct: 25 AADLGESMWHLSL---GSGGG---AESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDR 78
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
A A + + PER G+P C YYLKTGTCK+G++CK+HHP
Sbjct: 79 AAVAAAVRATGDYPERLGEPPCQYYLKTGTCKFGASCKFHHP 120
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 232 GAQMHILSASS----QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
G M LS S ++ PER P+C YYM TG C YG C+F+HP++R A +AA
Sbjct: 29 GESMWHLSLGSGGGAESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRAT 88
Query: 288 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P R G+ C Y G CKFG +C+F HP
Sbjct: 89 G-DYPERLGEPPCQYYLKTGTCKFGASCKFHHP 120
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYY 143
E PER+G P+C YY++TG C YG C+++HP+DR P R E C YY
Sbjct: 44 ESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRATGDYPERLGEPPCQYY 103
Query: 144 MRTGS 148
++TG+
Sbjct: 104 LKTGT 108
>gi|222635668|gb|EEE65800.1| hypothetical protein OsJ_21508 [Oryza sativa Japonica Group]
Length = 830
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 26/130 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEPDC +Y + G C +G +C +NHP + A + E+ P R G+PDC YY+
Sbjct: 184 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYV 243
Query: 100 KTGTCKYGSTCKYHHP----------------------KDRNGAGPVSFNILGLPMRQDE 137
K G+CK+G C+++HP + ++ V N+LGLP+R
Sbjct: 244 KFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT 303
Query: 138 KSCPYYMRTG 147
C YYM G
Sbjct: 304 GLCSYYMNRG 313
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 27/106 (25%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP------------------------KER 277
++ P RP +PDC YY+ G+CK+G +C+F+HP K +
Sbjct: 227 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 286
Query: 278 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
+ Q + LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 287 VEQV---KLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 329
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 185 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 244
Query: 306 YGICKFGPTCRFDHP 320
+G CKFG CRF+HP
Sbjct: 245 FGSCKFGMNCRFNHP 259
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAAQGAQY 82
A +P RPGEPDC +Y + G C +G NCRFNHP + +G
Sbjct: 227 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 286
Query: 83 REE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
E+ LP R G C YY+ G CK+G+ CK+ HP
Sbjct: 287 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 326
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 48 PGEPDCLFYRRT-GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
P + D + R T + G G P A + + E+ P R G+PDC YY+K G+CK+
Sbjct: 145 PQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKF 204
Query: 107 GSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGS 148
G +C Y+HP R G P R E C YY++ GS
Sbjct: 205 GISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGS 247
>gi|219362557|ref|NP_001136614.1| uncharacterized protein LOC100216738 [Zea mays]
gi|194696378|gb|ACF82273.1| unknown [Zea mays]
Length = 339
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 112/279 (40%), Gaps = 96/279 (34%)
Query: 30 HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------------- 74
H +E + YP RP EPDC FY +TG C +G+NC+F+HP
Sbjct: 124 HPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRS 183
Query: 75 ------YAAQGAQYREEL------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
+AA A ++++ PER GQPDC YY++ G CK+ S C ++H KD +G
Sbjct: 184 VAAKEHHAAARATLQDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSG 243
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSY 182
CP+YM+T + S ++ + R G
Sbjct: 244 ------------WHPAECPFYMKTRTCQFGSACEFY------------HPKDRCSGR--- 276
Query: 183 MPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS 242
G++ + G + SRN +L
Sbjct: 277 --------GGVIDGTDY----------------GHDFATKSRN-----------VL---- 297
Query: 243 QNLPERPDQPD---CRYYMNTGTCKYGADCKFHHPKERI 278
Q L P++PD C +YM G CKY +CKFHHP++R+
Sbjct: 298 QELAIYPERPDELECSHYMKHGYCKYKMNCKFHHPRDRL 336
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 117/321 (36%), Gaps = 124/321 (38%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR---------------------- 118
Q E+ PER P+C + L+ G CK+ S+C+Y+HPKD+
Sbjct: 65 QEHEDYPER---PECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSS 121
Query: 119 ----NGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSS 174
+S ++ P R E CP+Y++TGS + ++
Sbjct: 122 RHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKF----------------- 164
Query: 175 RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQ 234
+ P ++P+ GP SP + +++ A A
Sbjct: 165 -------HHPKDITPNMQ--------------GPASPKRSVAAKEHHAA-------ARAT 196
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTG--------------------------------- 261
+ Q PERP QPDCRYYM G
Sbjct: 197 LQDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSGWHPAECPFYMKTR 256
Query: 262 TCKYGADCKFHHPKER----------------IAQSAASNIGPLGL-PSRPGQAICSNYS 304
TC++G+ C+F+HPK+R A + + + L + P RP + CS+Y
Sbjct: 257 TCQFGSACEFYHPKDRCSGRGGVIDGTDYGHDFATKSRNVLQELAIYPERPDELECSHYM 316
Query: 305 MYGICKFGPTCRFDHPYAGYP 325
+G CK+ C+F HP P
Sbjct: 317 KHGYCKYKMNCKFHHPRDRLP 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI---------------AQSAASNIG 287
Q + P++P+C + + G CK+ + C+++HPK++ + +S
Sbjct: 65 QEHEDYPERPECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSSRHH 124
Query: 288 P----------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
P + P RP + C Y G CKFG C+F HP P G + P S+
Sbjct: 125 PKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRSV 184
Query: 338 LDSSLMNHQAISAT 351
++ +H A AT
Sbjct: 185 --AAKEHHAAARAT 196
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPER 89
+ + + YP RP E +C Y + G C Y NC+F+HP R+ LP++
Sbjct: 297 LQELAIYPERPDELECSHYMKHGYCKYKMNCKFHHP---------RDRLPKK 339
>gi|218198295|gb|EEC80722.1| hypothetical protein OsI_23177 [Oryza sativa Indica Group]
Length = 705
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 26/130 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEPDC +Y + G C +G +C +NHP + A + E+ P R G+PDC YY+
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYV 100
Query: 100 KTGTCKYGSTCKYHHP----------------------KDRNGAGPVSFNILGLPMRQDE 137
K G+CK+G C+++HP + ++ V N+LGLP+R
Sbjct: 101 KFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT 160
Query: 138 KSCPYYMRTG 147
C YYM G
Sbjct: 161 GLCSYYMNRG 170
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP---------------------KERIAQ 280
++ P RP +PDC YY+ G+CK+G +C+F+HP E ++
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 281 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
+ LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 101
Query: 306 YGICKFGPTCRFDHP 320
+G CKFG CRF+HP
Sbjct: 102 FGSCKFGMNCRFNHP 116
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAAQGAQY 82
A +P RPGEPDC +Y + G C +G NCRFNHP + +G
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 83 REE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
E+ LP R G C YY+ G CK+G+ CK+ HP
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 48 PGEPDCLFYRRT-GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
P + D + R T + G G P A + + E+ P R G+PDC YY+K G+CK+
Sbjct: 2 PQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKF 61
Query: 107 GSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGS 148
G +C Y+HP R G P R E C YY++ GS
Sbjct: 62 GISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGS 104
>gi|115468286|ref|NP_001057742.1| Os06g0520600 [Oryza sativa Japonica Group]
gi|75252736|sp|Q5Z5Q3.1|C3H43_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=OsC3H43
gi|54291262|dbj|BAD62014.1| translation initiation factor eIF-4F isozyme form subunit p82-like
[Oryza sativa Japonica Group]
gi|113595782|dbj|BAF19656.1| Os06g0520600 [Oryza sativa Japonica Group]
Length = 711
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 26/130 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEPDC +Y + G C +G +C +NHP + A + E+ P R G+PDC YY+
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYV 100
Query: 100 KTGTCKYGSTCKYHHP----------------------KDRNGAGPVSFNILGLPMRQDE 137
K G+CK+G C+++HP + ++ V N+LGLP+R
Sbjct: 101 KFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT 160
Query: 138 KSCPYYMRTG 147
C YYM G
Sbjct: 161 GLCSYYMNRG 170
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP---------------------KERIAQ 280
++ P RP +PDC YY+ G+CK+G +C+F+HP E ++
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 281 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
+ LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 101
Query: 306 YGICKFGPTCRFDHP 320
+G CKFG CRF+HP
Sbjct: 102 FGSCKFGMNCRFNHP 116
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAAQGAQY 82
A +P RPGEPDC +Y + G C +G NCRFNHP + +G
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 83 REE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
E+ LP R G C YY+ G CK+G+ CK+ HP
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 48 PGEPDCLFYRRT-GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
P + D + R T + G G P A + + E+ P R G+PDC YY+K G+CK+
Sbjct: 2 PQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKF 61
Query: 107 GSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGS 148
G +C Y+HP R G P R E C YY++ GS
Sbjct: 62 GISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGS 104
>gi|222635666|gb|EEE65798.1| hypothetical protein OsJ_21506 [Oryza sativa Japonica Group]
Length = 718
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + YP RPG PDC +Y G C +G C +NHPA A G + E P+R G+
Sbjct: 47 EPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCD-KLEHPQRPGEH 105
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR---------------------NGAGPVSFNILGLP 132
DC +YL+ G CKYG C+++HP DR + A V N LGLP
Sbjct: 106 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 165
Query: 133 MRQDEKSCPYYMRTG 147
+R C YYM G
Sbjct: 166 LRPGTGLCSYYMNRG 180
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 285
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 99 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 158
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
+ LGLP RPG +CS Y GICKFG C+F HP +G
Sbjct: 159 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSG 196
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 30 HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------- 73
H + GG + +P RPGE DCL Y R G C YG NCRFNHP
Sbjct: 85 HPAKHAGGCDKLE-HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKAC 143
Query: 74 -AYAAQGAQYREE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ ++G E LP R G C YY+ G CK+GS CK+HHP +G
Sbjct: 144 HCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 198
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 55 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 109
Query: 303 YSMYGICKFGPTCRFDHP 320
Y +G CK+G CRF+HP
Sbjct: 110 YLRFGRCKYGMNCRFNHP 127
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 164 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 193
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ P P RPG CS Y +G CKFG C ++HP
Sbjct: 52 VEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHP 86
>gi|449533652|ref|XP_004173786.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like,
partial [Cucumis sativus]
Length = 266
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 37/148 (25%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ--GAQYRE--ELPERNGQP 93
+A + P R G+PDC ++ +T C +GS C+FNHP + GA+ + LPER +P
Sbjct: 61 IANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEP 120
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKD--------------------RNGAG-------PVSF 126
C +Y+KTG CK+G CK+HHPKD AG P+S
Sbjct: 121 LCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEERAGDFKLVKPPISL 180
Query: 127 ------NILGLPMRQDEKSCPYYMRTGS 148
N GLP+R E CP+Y++TGS
Sbjct: 181 SPAIMHNSKGLPIRPGEVDCPFYLKTGS 208
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 299
A+S++LPER PDC Y++ T CK+G+ CKF+HPK+R A LP RP + +
Sbjct: 62 ANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPL 121
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C+ Y G CKFG C+F HP
Sbjct: 122 CAFYVKTGNCKFGINCKFHHP 142
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 60/125 (48%), Gaps = 37/125 (29%)
Query: 35 GGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQY---------- 82
G + AS P RP EP C FY +TG C +G NC+F+HP G +Y
Sbjct: 104 GAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVK 163
Query: 83 REE------------------------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
EE LP R G+ DC +YLKTG+CKYG+TC+Y+HP DR
Sbjct: 164 TEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP-DR 222
Query: 119 NGAGP 123
N P
Sbjct: 223 NAINP 227
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 32/113 (28%)
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK----------------------ER 277
+ + +LPERP +P C +Y+ TG CK+G +CKFHHPK ER
Sbjct: 108 SDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEER 167
Query: 278 ----------IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
I+ S A GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 168 AGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP 220
>gi|47499870|gb|AAT28673.1| zinc finger protein [Oryza sativa Japonica Group]
gi|47559177|gb|AAT35591.1| zinc-finger transcription factor [Oryza sativa Japonica Group]
Length = 207
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+
Sbjct: 35 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 94
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
G C++G C++DHP + Y S PLS +
Sbjct: 95 QNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 126
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 35 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 94
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 95 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 128
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
Q PER GQPDC YY++TG CK+G+TCKYHHP++ + N L LP+R +
Sbjct: 30 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 89
Query: 140 CPYYMRTG 147
C YY + G
Sbjct: 90 CAYYAQNG 97
>gi|125555540|gb|EAZ01146.1| hypothetical protein OsI_23175 [Oryza sativa Indica Group]
Length = 628
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + YP RPG PDC +Y G C +G C +NHPA A G + E P+R G+
Sbjct: 47 EPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHPAKHAGGCD-KLEHPQRPGEH 105
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR---------------------NGAGPVSFNILGLP 132
DC +YL+ G CKYG C+++HP DR + A V N LGLP
Sbjct: 106 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 165
Query: 133 MRQDEKSCPYYMRTG 147
+R C YYM G
Sbjct: 166 LRPGTGLCSYYMNRG 180
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 34/135 (25%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 285
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 99 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 158
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY------------PINYGLSLP 333
+ LGLP RPG +CS Y GICKFG C+F HP +G I+ G+++
Sbjct: 159 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHEKWDGSLQTNQISSGVNI- 217
Query: 334 PLSILDSSLMNHQAI 348
S+LD +N Q +
Sbjct: 218 -YSVLDHGELNEQPV 231
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 30 HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------- 73
H + GG + +P RPGE DCL Y R G C YG NCRFNHP
Sbjct: 85 HPAKHAGGCDKLE-HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKAC 143
Query: 74 -AYAAQGAQYREE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ ++G E LP R G C YY+ G CK+GS CK+HHP +G
Sbjct: 144 HCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 198
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 55 QEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 109
Query: 303 YSMYGICKFGPTCRFDHP 320
Y +G CK+G CRF+HP
Sbjct: 110 YLRFGRCKYGMNCRFNHP 127
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 164 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 193
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ P P RPG CS Y +G CKFG C ++HP
Sbjct: 52 VEPQEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHP 86
>gi|397567414|gb|EJK45571.1| hypothetical protein THAOC_35807 [Thalassiosira oceanica]
Length = 505
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 70/132 (53%), Gaps = 26/132 (19%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR-----EEL-PERNGQPDC 95
+PYP R GEPDC Y RTG C YG +C++NHP +G + E L P R G+P C
Sbjct: 6 TPYPLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERGGGVKPANPGEPLYPVRPGEPPC 65
Query: 96 GYYLKTGTCKYGSTCKYHH----PKDRNG--AGPVSF--------------NILGLPMRQ 135
YYLK GTCK+G CK+ H P++RN AG F ++ LP R
Sbjct: 66 QYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQYVFVTSNGSSTTVAEGTSVQVLPQRP 125
Query: 136 DEKSCPYYMRTG 147
E +C Y++R G
Sbjct: 126 SEPNCIYFLRNG 137
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 27/112 (24%)
Query: 33 QEGGGVAQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ------GAQY 82
+ GGGV A+P YP RPGEP C +Y + G C +G C+F+HP A + QY
Sbjct: 41 ERGGGVKPANPGEPLYPVRPGEPPCQYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQY 100
Query: 83 R-----------------EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
+ LP+R +P+C Y+L+ G CKYG+TCK+HHP D
Sbjct: 101 VFVTSNGSSTTVAEGTSVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHHPLD 152
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 303
P R +PDCR Y+ TG CKYG CK++HP ER +N G P RPG+ C Y
Sbjct: 9 PLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERGGGVKPANPGEPLYPVRPGEPPCQYY 68
Query: 304 SMYGICKFGPTCRFDHPYAGYPIN 327
+G CKFG C+FDHP G P N
Sbjct: 69 LKHGTCKFGQACKFDHP-TGAPRN 91
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKER----------IAQSAASNIGPLG- 290
P RP +P C+YY+ GTCK+G CKF H P+ R + + +S G
Sbjct: 57 PVRPGEPPCQYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQYVFVTSNGSSTTVAEGT 116
Query: 291 ----LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RP + C + G CK+G TC+F HP
Sbjct: 117 SVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHHP 150
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
Query: 224 RNQGDLGAGAQMHILS----------ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
RN+ +L AG + + S S Q LP+RP +P+C Y++ G CKYGA CKFHH
Sbjct: 90 RNRNNLPAGQYVFVTSNGSSTTVAEGTSVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHH 149
Query: 274 PKERI 278
P + +
Sbjct: 150 PLDAL 154
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM---RQDEKSCPYY 143
P R G+PDC YL+TG CKYG +CKY+HP + G V G P+ R E C YY
Sbjct: 9 PLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERGGGVKPANPGEPLYPVRPGEPPCQYY 68
Query: 144 MRTGS 148
++ G+
Sbjct: 69 LKHGT 73
>gi|42571795|ref|NP_973988.1| zinc finger CCCH domain-containing protein 13 [Arabidopsis
thaliana]
gi|122215429|sp|Q3ECU8.1|C3H13_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 13;
Short=AtC3H13
gi|332194141|gb|AEE32262.1| zinc finger CCCH domain-containing protein 13 [Arabidopsis
thaliana]
Length = 82
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 300
S + PERP +P+C YY+ TG C +CK+HHPK + GLP RPGQAIC
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAIC 61
Query: 301 SNYSMYGICKFGPTCRFDH 319
+YS +GIC+ GPTC+FDH
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPY 142
E+ PER G+P+C YYL+TG C CKYHHPK+ + P + N GLP+R + CP+
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPH 63
Query: 143 YMRTG 147
Y R G
Sbjct: 64 YSRFG 68
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA----QGAQYREELPERNGQPDCGYYL 99
+P RPGEP+C +Y RTG C NC+++HP Q + LP R GQ C +Y
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYS 65
Query: 100 KTGTCKYGSTCKYHH 114
+ G C+ G TCK+ H
Sbjct: 66 RFGICRSGPTCKFDH 80
>gi|115468284|ref|NP_001057741.1| Os06g0519400 [Oryza sativa Japonica Group]
gi|122168174|sp|Q0DBW8.1|C3H42_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=OsC3H42
gi|113595781|dbj|BAF19655.1| Os06g0519400 [Oryza sativa Japonica Group]
Length = 279
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + YP RPG PDC +Y G C +G C +NHPA A G + E P+R G+
Sbjct: 66 EPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCD-KLEHPQRPGEH 124
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR---------------------NGAGPVSFNILGLP 132
DC +YL+ G CKYG C+++HP DR + A V N LGLP
Sbjct: 125 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 184
Query: 133 MRQDEKSCPYYMRTG 147
+R C YYM G
Sbjct: 185 LRPGTGLCSYYMNRG 199
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 34/144 (23%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 285
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 118 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 177
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY------------PINYGLSLP 333
+ LGLP RPG +CS Y GICKFG C+F HP +G I+ G+++
Sbjct: 178 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHEKWDGSLQTNQISSGVNI- 236
Query: 334 PLSILDSSLMNHQAISATHSIETS 357
S+LD +N Q + + + S
Sbjct: 237 -YSVLDHGELNEQPVPSKDDFQVS 259
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------- 73
L H + GG + +P RPGE DCL Y R G C YG NCRFNHP
Sbjct: 101 LYNHPAKHAGGCDKLE-HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPW 159
Query: 74 ----AYAAQGAQYREE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ ++G E LP R G C YY+ G CK+GS CK+HHP +G
Sbjct: 160 KACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 217
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 128
Query: 303 YSMYGICKFGPTCRFDHP 320
Y +G CK+G CRF+HP
Sbjct: 129 YLRFGRCKYGMNCRFNHP 146
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 74/191 (38%), Gaps = 52/191 (27%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYY 143
+E P R G PDC YY++ G+CK+G C Y+HP G + L P R E C +
Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGG----CDKLEHPQRPGEHDCLH- 128
Query: 144 MRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYM 203
+L +Y + R + RL Q Y P W
Sbjct: 129 -----YLRFGRCKYGMNC------RFNHPPDRLPQQQVYFP--------------WKA-- 161
Query: 204 GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 263
+ ++G ++ + + LP RP C YYMN G C
Sbjct: 162 ----------------CHCHHSEGK----SEAEHVKLNFLGLPLRPGTGLCSYYMNRGIC 201
Query: 264 KYGADCKFHHP 274
K+G++CKFHHP
Sbjct: 202 KFGSNCKFHHP 212
>gi|297847070|ref|XP_002891416.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337258|gb|EFH67675.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 82
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 300
S N PERP +P+C YY+ TG C +CK+HHPK + + GLP RP QAIC
Sbjct: 2 SDGNFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPREPPCPLNDKGLPLRPDQAIC 61
Query: 301 SNYSMYGICKFGPTCRFDH 319
+YS +GICK GPTC+FDH
Sbjct: 62 PHYSRFGICKSGPTCKFDH 80
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN-GAGPVSFNILGLPMRQDEKSCPYYM 144
PER G+P+C YYL+TG C CKYHHPK+ P N GLP+R D+ CP+Y
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPREPPCPLNDKGLPLRPDQAICPHYS 65
Query: 145 RTG 147
R G
Sbjct: 66 RFG 68
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--------LPERNGQPDC 95
+P RPGEP+C +Y RTG C NC+++HP + RE LP R Q C
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHP----KNITPREPPCPLNDKGLPLRPDQAIC 61
Query: 96 GYYLKTGTCKYGSTCKYHH 114
+Y + G CK G TCK+ H
Sbjct: 62 PHYSRFGICKSGPTCKFDH 80
>gi|295913510|gb|ADG58004.1| transcription factor [Lycoris longituba]
Length = 170
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----------AQYREELPERNGQP 93
YP RPGE DC Y T C +G C+F+HP + +G E PER G+
Sbjct: 22 YPQRPGEKDCTHYMLTRTCKFGEACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGER 81
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG--------LPMRQDEKSCPYYMR 145
DC YY+KT CK+G CK++HPKD+ A V + +G LP R E C +Y +
Sbjct: 82 DCPYYIKTQKCKFGFRCKFNHPKDKLNALTVGGDRVGAGFIDHSLLPERPSEPICVFYSK 141
Query: 146 TGS 148
TG
Sbjct: 142 TGK 144
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-------AQSAASNIGPLG 290
L ++++ PERP + DC YY+ T CK+G CKF+HPK+++ + A I
Sbjct: 67 LVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHPKDKLNALTVGGDRVGAGFIDHSL 126
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RP + IC YS G CKFG C+F HP
Sbjct: 127 LPERPSEPICVFYSKTGKCKFGMNCKFHHP 156
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 16 SADNIEEAIWRLK--IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
A + IW + I D +E V +P RPGE DC +Y +T C +G C+FNHP
Sbjct: 44 EACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHP 103
Query: 74 AYAAQ---------GAQYREE--LPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
GA + + LPER +P C +Y KTG CK+G CK+HHPK
Sbjct: 104 KDKLNALTVGGDRVGAGFIDHSLLPERPSEPICVFYSKTGKCKFGMNCKFHHPK 157
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 86/224 (38%), Gaps = 56/224 (25%)
Query: 64 YGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
+G+ F HP + A + P+R G+ DC +Y+ T TCK+G CK+ H P
Sbjct: 2 FGTRSMFKHPR--LETASFPPMYPQRPGEKDCTHYMLTRTCKFGEACKFDH--------P 51
Query: 124 VSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYM 183
+ G+P D K P T SF G + PY + +
Sbjct: 52 IWVPEGGIP---DWKEVPLVPATESFPERPGER-----------DCPYYIKTQKCKFGFR 97
Query: 184 PLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ 243
P L+ ++ G + GAG H L
Sbjct: 98 CKFNHPKDK----------------LNALTVGGDRV----------GAGFIDHSL----- 126
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
LPERP +P C +Y TG CK+G +CKFHHPK S+ + G
Sbjct: 127 -LPERPSEPICVFYSKTGKCKFGMNCKFHHPKHIQIPSSGQSSG 169
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGPL--GLPSRPGQAI 299
P+RP + DC +YM T TCK+G CKF H P+ I + P P RPG+
Sbjct: 23 PQRPGEKDCTHYMLTRTCKFGEACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGERD 82
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C Y CKFG C+F+HP
Sbjct: 83 CPYYIKTQKCKFGFRCKFNHP 103
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY 75
L + ++ G G S P RP EP C+FY +TG C +G NC+F+HP +
Sbjct: 110 LTVGGDRVGAGFIDHSLLPERPSEPICVFYSKTGKCKFGMNCKFHHPKH 158
>gi|295913132|gb|ADG57827.1| transcription factor [Lycoris longituba]
Length = 206
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 81/172 (47%), Gaps = 34/172 (19%)
Query: 63 GYGSNCRFNHP---AYAAQGAQYR-EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
GYG CR+NHP ++ ++ + PE QP C +LKTG C++GSTC+Y+HP+
Sbjct: 3 GYGVRCRYNHPRDRGVVSKAPRFSASDHPEHASQPVCQNFLKTGACRFGSTCRYYHPRQV 62
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTW-------------- 164
G+ VS N G P+RQ EK CPYY++TG S ++ P
Sbjct: 63 GGS--VSLNYHGYPLRQGEKECPYYVKTGQCKFGSACKFHHPEPVSSFFSPPSSAVNPMV 120
Query: 165 ------SLQRAPYLSSRLQGTQSYMPLIVSP--------SQGIVPAPGWNTY 202
S Q+ P L+S G S P P S IVP PGW+ Y
Sbjct: 121 QPPLVPSPQQYPSLASWQVGRPSISPTTYMPGPYGPVYISSSIVPVPGWSPY 172
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 228 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
D G ++ SAS PE QP C+ ++ TG C++G+ C+++HP++ + S + N
Sbjct: 15 DRGVVSKAPRFSASDH--PEHASQPVCQNFLKTGACRFGSTCRYYHPRQ-VGGSVSLNY- 70
Query: 288 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G P R G+ C Y G CKFG C+F HP
Sbjct: 71 -HGYPLRQGEKECPYYVKTGQCKFGSACKFHHP 102
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 265 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---- 320
YG C+++HP++R S A P Q +C N+ G C+FG TCR+ HP
Sbjct: 4 YGVRCRYNHPRDRGVVSKAPRFSASDHPEHASQPVCQNFLKTGACRFGSTCRYYHPRQVG 63
Query: 321 ------YAGYPINYG 329
Y GYP+ G
Sbjct: 64 GSVSLNYHGYPLRQG 78
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
+S + P R + +C YY+ TG CK+G+ CKFHHP+
Sbjct: 66 VSLNYHGYPLRQGEKECPYYVKTGQCKFGSACKFHHPE 103
>gi|223993851|ref|XP_002286609.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977924|gb|EED96250.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 622
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 19/192 (9%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP---KDRNGAGPVSFNILGLPMRQDEKSCPYY 143
P+R+G+PDC YL+TG CKYG +CKY+HP + G P++ P+R E C Y+
Sbjct: 9 PQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPPCQYF 68
Query: 144 MRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYM 203
++ G+ ++ GT + +P G+V ++
Sbjct: 69 LKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEGCGGTANGLPA------GLV-------FL 115
Query: 204 GNIGPLSPTSIAGSNLIYSSRNQG-DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 262
+P+ SN ++ R G D + M S+S Q LP+RP +P+C Y++ G
Sbjct: 116 TTTNNSTPSYTVDSNGVF--RQSGSDAHVSSLMAAASSSVQVLPQRPTEPNCIYFLRNGR 173
Query: 263 CKYGADCKFHHP 274
CKYGA CKFHHP
Sbjct: 174 CKYGATCKFHHP 185
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR------EELPERNGQPD 94
+PYP R GEPDC Y RTG C YG +C++NHP G + P R +P
Sbjct: 5 TTPYPQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPP 64
Query: 95 CGYYLKTGTCKYGSTCKYHHP 115
C Y+LK GTCK+G +CK++HP
Sbjct: 65 CQYFLKHGTCKFGQSCKFNHP 85
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPGQAICSNY 303
P+R +PDCR Y+ TG CKYG CK++HP + N G P RP + C +
Sbjct: 9 PQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPPCQYF 68
Query: 304 SMYGICKFGPTCRFDHPYAG 323
+G CKFG +C+F+HP G
Sbjct: 69 LKHGTCKFGQSCKFNHPAGG 88
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
LP+R +P+C Y+L+ G CKYG+TCK+HHP D
Sbjct: 156 LPQRPTEPNCIYFLRNGRCKYGATCKFHHPID 187
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 54/130 (41%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS----------AASNIGPLGL--- 291
P RP +P C+Y++ GTCK+G CKF+HP + S +N P GL
Sbjct: 56 FPIRPTEPPCQYFLKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEGCGGTANGLPAGLVFL 115
Query: 292 -----------------------------------------PSRPGQAICSNYSMYGICK 310
P RP + C + G CK
Sbjct: 116 TTTNNSTPSYTVDSNGVFRQSGSDAHVSSLMAAASSSVQVLPQRPTEPNCIYFLRNGRCK 175
Query: 311 FGPTCRFDHP 320
+G TC+F HP
Sbjct: 176 YGATCKFHHP 185
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 33 QEGGGVAQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+ GGGV +P +P RP EP C ++ + G C +G +C+FNHPA
Sbjct: 41 ESGGGVKPLNPGEPMFPIRPTEPPCQYFLKHGTCKFGQSCKFNHPA 86
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
P RP EP+C+++ R G C YG+ C+F+HP A+
Sbjct: 157 PQRPTEPNCIYFLRNGRCKYGATCKFHHPIDTAK 190
>gi|413950618|gb|AFW83267.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 156
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 66/135 (48%), Gaps = 29/135 (21%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV------------------SFNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + + + N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGSFL 150
E C +YM+TG +L
Sbjct: 136 GEVDCSFYMKTGRYL 150
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 299
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 21/86 (24%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTG 102
A + LP R G+ DC +Y+KTG
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTG 147
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 276
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 277 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
A + GLP R G+ CS Y G
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTG 147
>gi|413950621|gb|AFW83270.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 167
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 33/150 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV------------------SFNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + + + N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGS----FLPSSGLQYAGSL 161
E C +YM+T + F+ S+ L G L
Sbjct: 136 GEVDCSFYMKTAANMVLFVASTILIGQGQL 165
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 299
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 21/86 (24%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTG 102
A + LP R G+ DC +Y+KT
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTA 147
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 276
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 277 -----RIAQSAASNIGPLGLPSRPGQAICSNY 303
A + GLP R G+ CS Y
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFY 143
>gi|223973265|gb|ACN30820.1| unknown [Zea mays]
gi|413950619|gb|AFW83268.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 170
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 29/133 (21%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS------------------FNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + ++ N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGS 148
E C +YM+TGS
Sbjct: 136 GEVDCSFYMKTGS 148
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 22/106 (20%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
A + LP R G+ DC +Y+KTG+CKYGS C+++HP DR G G
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHP-DRPGPG 166
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 276
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 277 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
A + GLP R G+ CS Y G CK+G CRF+HP
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHP 160
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 299
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN---GAGPVSFNILG---- 130
+ + PER G+PDC Y L CK+ S CK++HPKD G G + +++
Sbjct: 9 KAPNVEDSYPERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAV 67
Query: 131 LPMRQDEKSCPYYMRTG 147
LP+R E C +Y +TG
Sbjct: 68 LPVRPSEPICVFYAKTG 84
>gi|384250119|gb|EIE23599.1| hypothetical protein COCSUDRAFT_15464 [Coccomyxa subellipsoidea
C-169]
Length = 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-LPERNGQPDCGYYLKTG 102
+P RPG+P C FY +TG C +G C+F+HPA+ G Q LP R G+ CG++ KT
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHF--GVQLNSLGLPLRQGESVCGHFEKTH 481
Query: 103 TCKYGSTCKYHHPKDRNGA 121
TCK+G CK+HHP+ +GA
Sbjct: 482 TCKFGPACKFHHPEPLHGA 500
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
+ P RP QP C +Y TG CK+G CKF HP Q + LGLP R G+++C ++
Sbjct: 423 SFPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFGVQ-----LNSLGLPLRQGESVCGHF 477
Query: 304 SMYGICKFGPTCRFDHP 320
CKFGP C+F HP
Sbjct: 478 EKTHTCKFGPACKFHHP 494
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
P R GQP C +Y KTG CK+G CK+ HP V N LGLP+RQ E C ++ +
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFG----VQLNSLGLPLRQGESVCGHFEK 479
Query: 146 T 146
T
Sbjct: 480 T 480
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLP 333
P RPGQ +C Y+ G CKFG C+FDHP + G +N L LP
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFGVQLN-SLGLP 466
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
+ +S LP R + C ++ T TCK+G CKFHHP+
Sbjct: 458 VQLNSLGLPLRQGESVCGHFEKTHTCKFGPACKFHHPE 495
>gi|194705310|gb|ACF86739.1| unknown [Zea mays]
Length = 235
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 203 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 262
+G+ G + + G+ L YSS + G Q H PERP QP+C+YYM TG
Sbjct: 34 IGHHGSSTAIAYGGTYLPYSS-STGQSSNNHQEH-------GFPERPGQPECQYYMRTGD 85
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
CK+G CK++HP++ + L LP RPG C+ Y+ G C++G C++DHP
Sbjct: 86 CKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYAQNGYCRYGIACKYDHPMG 145
Query: 323 GYPINYGLSLPPLS 336
+ Y S PLS
Sbjct: 146 T--LGYSSSALPLS 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +G+ C++NHP ++ + Y LP R G C YY
Sbjct: 68 FPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYA 127
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G + + +P+
Sbjct: 128 QNGYCRYGIACKYDHPMGTLGYSSSALPLSDMPI 161
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYM 144
PER GQP+C YY++TG CK+G+TCKY+HP+D + + F+ L LP+R + C YY
Sbjct: 68 FPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYA 127
Query: 145 RTG 147
+ G
Sbjct: 128 QNG 130
>gi|357128272|ref|XP_003565798.1| PREDICTED: uncharacterized protein LOC100842536, partial
[Brachypodium distachyon]
Length = 1451
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 108/310 (34%), Gaps = 107/310 (34%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP RPG D Y++ H Y+ ER + +C + + G
Sbjct: 1156 YPERPGRSDGPLYKQ------------EHVDYS-----------ERPHKRECPFIKRFGD 1192
Query: 104 CKYGSTCKYHHPKDRNGAGPVSFN---------ILGLPMRQDEKSCPYYM--RTGSFLPS 152
CK+ S CKY H KDR P ++ ++ P R E CP+YM R F
Sbjct: 1193 CKFESLCKYQHSKDRY---PSRYHRKDPSQGGEVVEYPTRPGEPECPFYMKNRYCKFGAH 1249
Query: 153 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPT 212
+ L P SP+
Sbjct: 1250 CNFDHPKDLN---------------------PTTYSPTN------------------EKK 1270
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
S+AGS+ S+R + + Q PERP QPDCRYYM G CKY C FH
Sbjct: 1271 SVAGSDHHASTR--------ITLKDPAPQQQQYPERPGQPDCRYYMQFGKCKYLFACIFH 1322
Query: 273 HPKERI---------AQS---------AASNIGPLGLPSRPGQAI-----CSNYSMYGIC 309
HPK+R+ AQS AS I + G I C Y G C
Sbjct: 1323 HPKDRLPSGWHPSDPAQSDQYDTWQPTNASRIENFCQQEQIGAEIHGMPECPFYMKTGKC 1382
Query: 310 KFGPTCRFDH 319
+FG C F H
Sbjct: 1383 QFGSACEFRH 1392
Score = 77.8 bits (190), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 28/135 (20%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----------AYAAQGAQYREELP-- 87
Q YP RPG+PDC +Y + G C Y C F+HP + AQ QY P
Sbjct: 1291 QQQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPSGWHPSDPAQSDQYDTWQPTN 1350
Query: 88 ---------------ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
E +G P+C +Y+KTG C++GS C++ H KD V + + P
Sbjct: 1351 ASRIENFCQQEQIGAEIHGMPECPFYMKTGKCQFGSACEFRHLKDTRSTTEVEEHAM-YP 1409
Query: 133 MRQDEKSCPYYMRTG 147
R E C +YM+ G
Sbjct: 1410 ERPGEPECSHYMKHG 1424
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--LPERNGQPDCGYYLKTGTCKY 106
G P+C FY +TG C +GS C F H + E PER G+P+C +Y+K G C +
Sbjct: 1369 GMPECPFYMKTGKCQFGSACEFRHLKDTRSTTEVEEHAMYPERPGEPECSHYMKHGYCNF 1428
Query: 107 GSTCKYHHPKDRNGAGPV 124
CK+HHP DR PV
Sbjct: 1429 QMNCKFHHPGDRLCKKPV 1446
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 104/288 (36%), Gaps = 70/288 (24%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYRE---------ELPERNGQPD 94
Y RP + +C F +R G C + S C++ H +R+ E P R G+P+
Sbjct: 1175 YSERPHKRECPFIKRFGDCKFESLCKYQHSKDRYPSRYHRKDPSQGGEVVEYPTRPGEPE 1234
Query: 95 CGYYLKTGTCKYGSTCKY------------------------HHPKDRNGAGPVSFNILG 130
C +Y+K CK+G+ C + HH R +
Sbjct: 1235 CPFYMKNRYCKFGAHCNFDHPKDLNPTTYSPTNEKKSVAGSDHHASTRITLKDPAPQQQQ 1294
Query: 131 LPMRQDEKSCPYYMRTGSF--------------LPS----SGLQYAGSLPTWSLQRAPYL 172
P R + C YYM+ G LPS S + TW A +
Sbjct: 1295 YPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPSGWHPSDPAQSDQYDTWQPTNASRI 1354
Query: 173 SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG 232
+ Q Q I + G+ P + G S + +R+ ++
Sbjct: 1355 ENFCQQEQ-----IGAEIHGMPECP----FYMKTGKCQFGSACEFRHLKDTRSTTEVEEH 1405
Query: 233 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 280
A PERP +P+C +YM G C + +CKFHHP +R+ +
Sbjct: 1406 AMY----------PERPGEPECSHYMKHGYCNFQMNCKFHHPGDRLCK 1443
Score = 61.6 bits (148), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 311
P+C +YM TG C++G+ C+F H K+ + + P RPG+ CS+Y +G C F
Sbjct: 1371 PECPFYMKTGKCQFGSACEFRHLKDTRSTTEVEEHAMY--PERPGEPECSHYMKHGYCNF 1428
Query: 312 GPTCRFDHP 320
C+F HP
Sbjct: 1429 QMNCKFHHP 1437
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 19/92 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQY-------------------RE 84
YP RPG+ +C Y G C G +C FNHP+ R
Sbjct: 908 YPQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNRV 967
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
LP R G +C YY++ G C+YG C ++HP+
Sbjct: 968 GLPIREGARNCVYYMRNGACRYGKRCHFNHPE 999
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS---------------NIGP 288
N P+RP + +C YM+ G+C G C F+HP + A+ S +
Sbjct: 907 NYPQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNR 966
Query: 289 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+GLP R G C Y G C++G C F+HP
Sbjct: 967 VGLPIREGARNCVYYMRNGACRYGKRCHFNHP 998
Score = 59.3 bits (142), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKE-------------RIAQSAASNIGPLGL- 291
P RP +P+C +YM CK+GA C F HPK+ +A S + L
Sbjct: 1227 PTRPGEPECPFYMKNRYCKFGAHCNFDHPKDLNPTTYSPTNEKKSVAGSDHHASTRITLK 1286
Query: 292 ---------PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 336
P RPGQ C Y +G CK+ C F HP P + S P S
Sbjct: 1287 DPAPQQQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPSGWHPSDPAQS 1340
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICS 301
ERP + +C + G CK+ + CK+ H K+R G P+RPG+ C
Sbjct: 1177 ERPHKRECPFIKRFGDCKFESLCKYQHSKDRYPSRYHRKDPSQGGEVVEYPTRPGEPECP 1236
Query: 302 NYSMYGICKFGPTCRFDHPYAGYPINY 328
Y CKFG C FDHP P Y
Sbjct: 1237 FYMKNRYCKFGAHCNFDHPKDLNPTTY 1263
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 16/78 (20%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP---------------KDRNGAGPV-SFNILG 130
P+R G+ +C Y+ G+C G +C ++HP +D +G + N +G
Sbjct: 909 PQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNRVG 968
Query: 131 LPMRQDEKSCPYYMRTGS 148
LP+R+ ++C YYMR G+
Sbjct: 969 LPIREGARNCVYYMRNGA 986
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+ D + V + + YP RPGEP+C Y + G C + NC+F+HP
Sbjct: 1393 LKDTRSTTEVEEHAMYPERPGEPECSHYMKHGYCNFQMNCKFHHPG 1438
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 237 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 287
IL + LP R +C YYM G C+YG C F+HP+ I +S G
Sbjct: 961 ILELNRVGLPIREGARNCVYYMRNGACRYGKRCHFNHPEHVIDAHFSSPTG 1011
Score = 41.6 bits (96), Expect = 0.81, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAY 75
P R G +C++Y R G C YG C FNHP +
Sbjct: 970 PIREGARNCVYYMRNGACRYGKRCHFNHPEH 1000
>gi|297845874|ref|XP_002890818.1| hypothetical protein ARALYDRAFT_890484 [Arabidopsis lyrata subsp.
lyrata]
gi|297336660|gb|EFH67077.1| hypothetical protein ARALYDRAFT_890484 [Arabidopsis lyrata subsp.
lyrata]
Length = 269
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+ Q+SPYP RPG +C Y +TGLC +GS+CR+NHP Q R P C Y
Sbjct: 58 MTQSSPYPVRPGVENCQCYIKTGLCRFGSSCRYNHPNQRPQV---------RIDAPICKY 108
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPV 124
+LK G+CK+GS C + H DRN A P+
Sbjct: 109 FLK-GSCKFGSACIFQHIMDRNVAEPM 134
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 14/74 (18%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
P RP +C+ Y+ TG C++G+ C+++HP +R P A Y +
Sbjct: 65 PVRPGVENCQCYIKTGLCRFGSSCRYNHPNQR--------------PQVRIDAPICKYFL 110
Query: 306 YGICKFGPTCRFDH 319
G CKFG C F H
Sbjct: 111 KGSCKFGSACIFQH 124
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 275 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
KER+ QS+ P RPG C Y G+C+FG +CR++HP
Sbjct: 55 KERMTQSSP-------YPVRPGVENCQCYIKTGLCRFGSSCRYNHP 93
>gi|307103601|gb|EFN51860.1| hypothetical protein CHLNCDRAFT_27455, partial [Chlorella
variabilis]
Length = 71
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
P+RP QP C +Y TG C++G CK+HHP E A + P GLP RPGQ +C+ Y
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAE-----FAVRLNPRGLPVRPGQPVCTFYQ 55
Query: 305 MYGICKFGPTCRFDHP 320
G CKFGP C++ HP
Sbjct: 56 KTGECKFGPACKYHHP 71
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
+P RPG+P C FY++TG C +G C+++HPA A R LP R GQP C +Y KTG
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAEFAVRLNPRG-LPVRPGQPVCTFYQKTGE 59
Query: 104 CKYGSTCKYHHP 115
CK+G CKYHHP
Sbjct: 60 CKFGPACKYHHP 71
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
P+R GQP C +Y KTG C++G CKYHHP + V N GLP+R + C +Y +
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAEF----AVRLNPRGLPVRPGQPVCTFYQK 56
Query: 146 TG 147
TG
Sbjct: 57 TG 58
Score = 45.1 bits (105), Expect = 0.076, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
+ LP RP QP C +Y TG CK+G CK+HHP
Sbjct: 40 RGLPVRPGQPVCTFYQKTGECKFGPACKYHHP 71
>gi|413916353|gb|AFW56285.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 287
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYA 158
++TG+CK+ + CK+HHP N S GL + P GS PS LQ
Sbjct: 1 MRTGSCKFATNCKFHHPDPTNA----SSKEPGL--EHENGDVPLQNVQGSSQPS--LQMW 52
Query: 159 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGS 217
+ Q P+L+ SY +V P QG+ P+ W+ Y + P P +
Sbjct: 53 PDQRALNEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPPGVPFP 107
Query: 218 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
+ + N A S PERP QP+C++++ +G CKY C++HHP+ R
Sbjct: 108 HFPAAHMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSR 167
Query: 278 IAQSAASNIGPLGLPSRP 295
+ + + P+GLP +P
Sbjct: 168 QSAPPPAGLSPIGLPIKP 185
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 114 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 173
Query: 124 VSFNILGLPMR 134
+ +GLP++
Sbjct: 174 AGLSPIGLPIK 184
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C Y CR++HP
Sbjct: 135 YPERPGQPECQHFVKSGFCKYRMKCRYHHP 164
>gi|297735284|emb|CBI17646.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ ++ PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 26 QDAMWQMNLRSSE----TMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAI 81
Query: 78 QGAQYREELPERNGQPDC 95
A+ + E PER GQP+C
Sbjct: 82 ATARMKGEFPERMGQPEC 99
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 231 AGAQMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 286
A QM++ S+ + PERP +PDC YY+ TG C++G C+F+HP R +A + A
Sbjct: 28 AMWQMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMK 87
Query: 287 GPLGLPSRPGQAICSNYSMYGI 308
G P R GQ C ++ I
Sbjct: 88 G--EFPERMGQPECQACVLFFI 107
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
PER G+PDC YY++TG C++G TC+++HP +R A + P R + C +
Sbjct: 46 PERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQPECQACVLF 105
Query: 147 GSFLP 151
F P
Sbjct: 106 FIFFP 110
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ CS Y G+C+FG TCRF+HP
Sbjct: 46 PERPGEPDCSYYIRTGLCRFGITCRFNHP 74
>gi|295913146|gb|ADG57833.1| transcription factor [Lycoris longituba]
Length = 148
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 42/118 (35%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA----QGAQYREEL-------------- 86
P RPGE DC FY +TG C YG+ CR+NHP + GA + +
Sbjct: 20 PIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTSLPAGLVNP 79
Query: 87 ------------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
P+R GQP+C +Y+KTG C +G CK+HHP DR+
Sbjct: 80 AANLIPSLDPLLAQASLGVCPTMYPQRPGQPECDFYMKTGRCNFGERCKFHHPVDRSA 137
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 75/198 (37%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
LP R G+ DC +YLKTG+CKYG+TC+Y+HP+ + P+ NI M
Sbjct: 19 LPIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQT-----------IMP 67
Query: 146 TGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGN 205
+G+ LP+ + A +L S PL+ S G+ P
Sbjct: 68 SGTSLPAGLVNPAANL-----------------IPSLDPLLAQASLGVCPT--------- 101
Query: 206 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 265
+Y R P +P+ C +YM TG C +
Sbjct: 102 --------------MYPQR---------------------PGQPE---CDFYMKTGRCNF 123
Query: 266 GADCKFHHPKERIAQSAA 283
G CKFHHP +R A A+
Sbjct: 124 GERCKFHHPVDRSAPKAS 141
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 53/121 (43%), Gaps = 38/121 (31%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP-KERIAQSAASNIG--------- 287
L +S+ LP RP + DC +Y+ TG+CKYGA C+++HP + I +NIG
Sbjct: 12 LLHNSKGLPIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTS 71
Query: 288 -PLGL---------------------------PSRPGQAICSNYSMYGICKFGPTCRFDH 319
P GL P RPGQ C Y G C FG C+F H
Sbjct: 72 LPAGLVNPAANLIPSLDPLLAQASLGVCPTMYPQRPGQPECDFYMKTGRCNFGERCKFHH 131
Query: 320 P 320
P
Sbjct: 132 P 132
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
YP RPG+P+C FY +TG C +G C+F+HP
Sbjct: 103 YPQRPGQPECDFYMKTGRCNFGERCKFHHPV 133
>gi|219127658|ref|XP_002184048.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404279|gb|EEC44226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 549
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 31/127 (24%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-------PERNGQPDCGYYLKTGTC 104
DC Y RTG C YG +C++NHPA G R + P R +P C YY+K G+C
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSC 84
Query: 105 KYGSTCKYHHP-----------------KDRNGAGPVSFN-------ILGLPMRQDEKSC 140
K+G CK++HP R+ PV F+ + LP R DE C
Sbjct: 85 KFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDC 144
Query: 141 PYYMRTG 147
Y+++ G
Sbjct: 145 IYFLKNG 151
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 32/115 (27%)
Query: 33 QEGGGV-AQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-- 85
Q GGG+ A P +P R EP C +Y + G C +G C+FNHP + +Q +
Sbjct: 50 QSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTP 109
Query: 86 -------------------------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
LP+R +PDC Y+LK G CKYG+TC+YHHP
Sbjct: 110 VTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYG 307
DCR Y+ TG CKYG CK++HP QS P+ P R + +C Y +G
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPAN--VQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHG 82
Query: 308 ICKFGPTCRFDHP 320
CKFG C+F+HP
Sbjct: 83 SCKFGQACKFNHP 95
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------------- 290
P R ++P C+YYM G+CK+G CKF+HP + S + P+
Sbjct: 66 FPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQ 125
Query: 291 ---------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RP + C + G CK+G TCR+ HP
Sbjct: 126 CDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
Q LP+RPD+PDC Y++ G CKYGA C++HHP
Sbjct: 133 QFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAG----PVSFNILGLPMRQDEKSCPYYMRTGS 148
DC YL+TG CKYG +CKY+HP + G P+ + P+R +E C YYM+ GS
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGS 83
>gi|219130045|ref|XP_002185185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403364|gb|EEC43317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 549
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 31/127 (24%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-------PERNGQPDCGYYLKTGTC 104
DC Y RTG C YG +C++NHPA G R + P R +P C YY+K G+C
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSC 84
Query: 105 KYGSTCKYHHP-----------------KDRNGAGPVSFN-------ILGLPMRQDEKSC 140
K+G CK++HP R+ PV F+ + LP R DE C
Sbjct: 85 KFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDC 144
Query: 141 PYYMRTG 147
Y+++ G
Sbjct: 145 IYFLKNG 151
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 32/115 (27%)
Query: 33 QEGGGV-AQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-- 85
Q GGG+ A P +P R EP C +Y + G C +G C+FNHP + +Q +
Sbjct: 50 QSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTP 109
Query: 86 -------------------------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
LP+R +PDC Y+LK G CKYG+TC+YHHP
Sbjct: 110 VTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYG 307
DCR Y+ TG CKYG CK++HP QS P+ P R + +C Y +G
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPAN--VQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHG 82
Query: 308 ICKFGPTCRFDHP 320
CKFG C+F+HP
Sbjct: 83 SCKFGQACKFNHP 95
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------------- 290
P R ++P C+YYM G+CK+G CKF+HP + S + P+
Sbjct: 66 FPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQ 125
Query: 291 ---------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RP + C + G CK+G TCR+ HP
Sbjct: 126 CDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
Q LP+RPD+PDC Y++ G CKYGA C++HHP
Sbjct: 133 QFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAG----PVSFNILGLPMRQDEKSCPYYMRTGS 148
DC YL+TG CKYG +CKY+HP + G P+ + P+R +E C YYM+ GS
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGS 83
>gi|219363609|ref|NP_001136594.1| uncharacterized protein LOC100216717 [Zea mays]
gi|194696306|gb|ACF82237.1| unknown [Zea mays]
gi|413950616|gb|AFW83265.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 165
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP------LGLPSRPGQAI 299
P+RP + C +YM TG+CKY CKFHHP R A + N P LP R
Sbjct: 56 PQRPGETVCDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEA 115
Query: 300 CSNYSMYGICKFGPTCRFDHP 320
C+ Y G+C+FG C+FDHP
Sbjct: 116 CAFYMRSGMCRFGAHCKFDHP 136
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 32/122 (26%)
Query: 58 RTGLCGYGSNCRFNHP---------AYAAQGAQ------------YREEL----PERNGQ 92
+TG C YGS CRFNHP A+ Q E L P+R G+
Sbjct: 2 KTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGE 61
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDR-------NGAGPVSFNILGLPMRQDEKSCPYYMR 145
C +Y+KTG+CKY CK+HHP R NG + LP R+D ++C +YMR
Sbjct: 62 TVCDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMR 121
Query: 146 TG 147
+G
Sbjct: 122 SG 123
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 14/84 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE------------LPERNG 91
YP RPGE C FY +TG C Y C+F+HP ++ A + +E LP R
Sbjct: 55 YPQRPGETVCDFYMKTGSCKYSQKCKFHHP--ISRFAPHSKENGDPQQPATLASLPRRED 112
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y+++G C++G+ CK+ HP
Sbjct: 113 AEACAFYMRSGMCRFGAHCKFDHP 136
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 71/201 (35%), Gaps = 56/201 (27%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYA 158
+KTG+CKYGS C+++HP A ++F +
Sbjct: 1 MKTGSCKYGSICRFNHPDRPGPAADIAFMV------------------------------ 30
Query: 159 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNT--YMGNIGPLSPTSIA 215
P + + L + +P +V P I P PG + G +
Sbjct: 31 -----------PLVQATLPSSAPIVPAVVEPLPMIYPQRPGETVCDFYMKTGSCKYSQKC 79
Query: 216 G-----SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 270
S S+ GD A + +LP R D C +YM +G C++GA CK
Sbjct: 80 KFHHPISRFAPHSKENGDPQQPATL-------ASLPRREDAEACAFYMRSGMCRFGAHCK 132
Query: 271 FHHPKERIAQSAASNIGPLGL 291
F HP A S G G+
Sbjct: 133 FDHPPREEAISELQAAGKEGI 153
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 258 MNTGTCKYGADCKFHHPKER-----------IAQS----------AASNIGPLGLPSRPG 296
M TG+CKYG+ C+F+HP + Q+ A P+ P RPG
Sbjct: 1 MKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPG 60
Query: 297 QAICSNYSMYGICKFGPTCRFDHPYAGY 324
+ +C Y G CK+ C+F HP + +
Sbjct: 61 ETVCDFYMKTGSCKYSQKCKFHHPISRF 88
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 IWRLKIHDNQEGG--GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
I R H + G A + P R C FY R+G+C +G++C+F+HP
Sbjct: 85 ISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 136
>gi|449015918|dbj|BAM79320.1| unknown zinc-finger protein [Cyanidioschyzon merolae strain 10D]
Length = 688
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP R G PDCL Y +TG C +G+ C+FNHP + A+ + L R DC ++ TG+
Sbjct: 240 YPCREGAPDCLHYLKTGRCQFGARCKFNHP---PRDARLIDSLNRR----DCFDWVMTGS 292
Query: 104 CKYGSTCKYHHP 115
C YGS+CKY+HP
Sbjct: 293 CPYGSSCKYNHP 304
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 227 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAAS 284
G L AGA L++ P R PDC +Y+ TG C++GA CKF+HP R+ S
Sbjct: 222 GMLSAGANTAQLTSRPGVYPCREGAPDCLHYLKTGRCQFGARCKFNHPPRDARLIDSL-- 279
Query: 285 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ C ++ M G C +G +C+++HP
Sbjct: 280 -----------NRRDCFDWVMTGSCPYGSSCKYNHP 304
>gi|295913268|gb|ADG57891.1| transcription factor [Lycoris longituba]
Length = 73
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
+C YYLK G C +G TCK+HHP D+ G AG V NILG P+R EK C YY+RTG
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKAGIAGRVQLNILGYPLRPSEKECAYYLRTG 58
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
+C+YY+ G C +G CKFHHP ++ + + LG P RP + C+ Y G CKFG
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKAGIAGRVQLNILGYPLRPSEKECAYYLRTGQCKFG 63
Query: 313 PTCRFDHP 320
TC+F HP
Sbjct: 64 STCKFHHP 71
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-----PERNGQPDCGYYLKTGTCKY 106
+C +Y + G+C +G C+F+HP A G R +L P R + +C YYL+TG CK+
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKA-GIAGRVQLNILGYPLRPSEKECAYYLRTGQCKF 62
Query: 107 GSTCKYHHPK 116
GSTCK+HHP+
Sbjct: 63 GSTCKFHHPQ 72
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 225 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
++ + Q++IL P RP + +C YY+ TG CK+G+ CKFHHP+
Sbjct: 27 DKAGIAGRVQLNIL-----GYPLRPSEKECAYYLRTGQCKFGSTCKFHHPQ 72
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RP E +C +Y RTG C +GS C+F+HP
Sbjct: 42 YPLRPSEKECAYYLRTGQCKFGSTCKFHHP 71
>gi|452825226|gb|EME32224.1| tetratricopeptide repeat (TPR)-containing protein [Galdieria
sulphuraria]
Length = 736
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYY 98
A+ YP R PDC++Y +TG C YGS C+FNHP E L + + DC +
Sbjct: 336 AEYITYPVRLNSPDCMYYLKTGKCNYGSRCKFNHPPRD-------ERLIKALSRRDCFDF 388
Query: 99 LKTGTCKYGSTCKYHHP 115
L+ G C YG +CKY+HP
Sbjct: 389 LQFGRCPYGKSCKYNHP 405
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 15/77 (19%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 303
P R + PDC YY+ TG C YG+ CKF+HP ER+ + L R C ++
Sbjct: 342 PVRLNSPDCMYYLKTGKCNYGSRCKFNHPPRDERLIK---------ALSRRD----CFDF 388
Query: 304 SMYGICKFGPTCRFDHP 320
+G C +G +C+++HP
Sbjct: 389 LQFGRCPYGKSCKYNHP 405
>gi|297845880|ref|XP_002890821.1| hypothetical protein ARALYDRAFT_313613 [Arabidopsis lyrata subsp.
lyrata]
gi|297336663|gb|EFH67080.1| hypothetical protein ARALYDRAFT_313613 [Arabidopsis lyrata subsp.
lyrata]
Length = 295
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 25/133 (18%)
Query: 6 QVKSNAVANQSADNIEEAIWR-------------LKIHDNQEGGGVAQASPYPARPGEPD 52
Q SN + + E +W+ + + + +G S YP RPGE +
Sbjct: 76 QRVSNVEMQRRSHETESRLWQRARTPDSRGSGSTMMLEERTQGRSEPVLSAYPIRPGEEN 135
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG-QPDCGYYLKTGTCKYGSTCK 111
C FY + LCG+GS+C +NHP E+P R G + DC ++ K G+CK GS C+
Sbjct: 136 CPFYLKNHLCGWGSDCCYNHPPL--------HEIPYRIGNKLDCKFF-KAGSCKRGSNCQ 186
Query: 112 YHHPKDRNGAGPV 124
++HP+D GA P+
Sbjct: 187 FYHPRD--GAEPM 197
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 25/128 (19%)
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
+GS ++ R QG +LSA P RP + +C +Y+ C +G+DC ++HP
Sbjct: 106 SGSTMMLEERTQG-----RSEPVLSA----YPIRPGEENCPFYLKNHLCGWGSDCCYNHP 156
Query: 275 KERIAQSAASNIGPL-GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG-YPINYGLSL 332
PL +P R G + + G CK G C+F HP G P+ G +
Sbjct: 157 -------------PLHEIPYRIGNKLDCKFFKAGSCKRGSNCQFYHPRDGAEPMRQGRT- 202
Query: 333 PPLSILDS 340
P L DS
Sbjct: 203 PDLRRNDS 210
>gi|414881849|tpg|DAA58980.1| TPA: hypothetical protein ZEAMMB73_531605 [Zea mays]
Length = 94
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPGQ 297
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 6 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 65
Query: 298 AICSNYSMYGICKFGPTCRFDHP 320
C+ Y G C FG C+FDHP
Sbjct: 66 EACAFYMRSGTCGFGARCKFDHP 88
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---------AGPVSFNILGLPMRQDE 137
P+R G+ C +Y+KTG+CKY CK+HHP DR+ PV+ + GLP R+D
Sbjct: 6 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 65
Query: 138 KSCPYYMRTGS 148
++C +YMR+G+
Sbjct: 66 EACAFYMRSGT 76
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE-----------LPERNG 91
YP RPGE C FY +TG C Y NC+F+HP +A ++ E+ LP R
Sbjct: 5 YPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRRED 64
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y+++GTC +G+ CK+ HP
Sbjct: 65 AEACAFYMRSGTCGFGARCKFDHP 88
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 238 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
++ + LP R D C +YM +GTC +GA CKF HP
Sbjct: 52 VALTLAGLPRREDAEACAFYMRSGTCGFGARCKFDHP 88
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 288 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
P+ P RPG+ +C Y G CK+ C+F HP+
Sbjct: 2 PMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 35
>gi|334182942|ref|NP_174253.2| putative zinc finger CCCH domain-containing protein 10 [Arabidopsis
thaliana]
gi|380865369|sp|Q9C7P1.2|C3H10_ARATH RecName: Full=Putative zinc finger CCCH domain-containing protein
10; Short=AtC3H10
gi|332192988|gb|AEE31109.1| putative zinc finger CCCH domain-containing protein 10 [Arabidopsis
thaliana]
Length = 389
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP-DCGYYL 99
+S YP RPGE +CLFY + LC +GS C +NHP +E+P R G+ DC
Sbjct: 125 SSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPL--------QEIPCRIGKKLDC---- 172
Query: 100 KTGTCKYGSTCKYHHPKDRNG 120
K G CK GS C ++HPK+R+G
Sbjct: 173 KAGACKRGSNCPFNHPKERDG 193
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 33/117 (28%)
Query: 217 SNLIYSSRNQGDLGAGAQMH-----------ILSASSQNLPERPDQPDCRYYMNTGTCKY 265
S L +R Q G+ ++M +LS++ P RP + +C +YM C++
Sbjct: 92 SRLWQRARTQDRRGSESRMMFDGRTQWSHAPVLSSA---YPVRPGEDNCLFYMKNHLCEW 148
Query: 266 GADCKFHHPKERIAQSAASNIGPL-GLPSRPGQAI-CSNYSMYGICKFGPTCRFDHP 320
G++C ++HP PL +P R G+ + C G CK G C F+HP
Sbjct: 149 GSECCYNHP-------------PLQEIPCRIGKKLDCK----AGACKRGSNCPFNHP 188
>gi|159486531|ref|XP_001701292.1| key regulator in ER unfolded protein response [Chlamydomonas
reinhardtii]
gi|158271775|gb|EDO97587.1| key regulator in ER unfolded protein response [Chlamydomonas
reinhardtii]
Length = 1573
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ P RP + C +Y+ TG CK+ C F HP E + A LGLP RP + +C+
Sbjct: 1478 REFPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHAVRLTA-----LGLPLRPAEPVCTF 1532
Query: 303 YSMYGICKFGPTCRFDHP 320
Y C FGP C+F+HP
Sbjct: 1533 YLKNNECGFGPACKFNHP 1550
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
+P RPG+ C FY +TG C + C F+HP A LP R +P C +YLK
Sbjct: 1480 FPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHAVRLTALG-LPLRPAEPVCTFYLKNNE 1538
Query: 104 CKYGSTCKYHHPKDR 118
C +G CK++HP R
Sbjct: 1539 CGFGPACKFNHPMLR 1553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYY 143
E P R G+ C +Y+KTG CK+ TC + HP + V LGLP+R E C +Y
Sbjct: 1478 REFPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHA----VRLTALGLPLRPAEPVCTFY 1533
Query: 144 MR 145
++
Sbjct: 1534 LK 1535
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
H + ++ LP RP +P C +Y+ C +G CKF+HP R
Sbjct: 1512 HAVRLTALGLPLRPAEPVCTFYLKNNECGFGPACKFNHPMLR 1553
>gi|309256993|gb|ADO62624.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 71.6 bits (174), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTG 53
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS + LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENDGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.7 bits (91), Expect = 2.7, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|309257037|gb|ADO62646.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y++TG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YMRTG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTG 53
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMRTGKCKFGLTCKFH 64
Score = 40.8 bits (94), Expect = 1.2, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY RTG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMRTGKCKFGLTCKFH 64
>gi|309256901|gb|ADO62578.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256903|gb|ADO62579.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256905|gb|ADO62580.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256907|gb|ADO62581.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256909|gb|ADO62582.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256911|gb|ADO62583.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256913|gb|ADO62584.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256915|gb|ADO62585.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256917|gb|ADO62586.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256919|gb|ADO62587.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256925|gb|ADO62590.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256927|gb|ADO62591.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256929|gb|ADO62592.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256931|gb|ADO62593.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256933|gb|ADO62594.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256935|gb|ADO62595.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256937|gb|ADO62596.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256939|gb|ADO62597.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256941|gb|ADO62598.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256943|gb|ADO62599.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256945|gb|ADO62600.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256947|gb|ADO62601.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256949|gb|ADO62602.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256951|gb|ADO62603.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256953|gb|ADO62604.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256955|gb|ADO62605.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256957|gb|ADO62606.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256959|gb|ADO62607.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256961|gb|ADO62608.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256963|gb|ADO62609.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256965|gb|ADO62610.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256967|gb|ADO62611.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256969|gb|ADO62612.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256971|gb|ADO62613.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256973|gb|ADO62614.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256975|gb|ADO62615.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256977|gb|ADO62616.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256979|gb|ADO62617.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256981|gb|ADO62618.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256983|gb|ADO62619.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256985|gb|ADO62620.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256987|gb|ADO62621.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256995|gb|ADO62625.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256997|gb|ADO62626.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256999|gb|ADO62627.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257001|gb|ADO62628.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257003|gb|ADO62629.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257005|gb|ADO62630.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257007|gb|ADO62631.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257009|gb|ADO62632.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257011|gb|ADO62633.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257013|gb|ADO62634.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257015|gb|ADO62635.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257017|gb|ADO62636.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257019|gb|ADO62637.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257021|gb|ADO62638.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257023|gb|ADO62639.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257025|gb|ADO62640.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257029|gb|ADO62642.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257033|gb|ADO62644.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257039|gb|ADO62647.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257041|gb|ADO62648.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257043|gb|ADO62649.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257045|gb|ADO62650.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257047|gb|ADO62651.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257049|gb|ADO62652.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257051|gb|ADO62653.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257053|gb|ADO62654.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257055|gb|ADO62655.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257057|gb|ADO62656.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257059|gb|ADO62657.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257061|gb|ADO62658.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257063|gb|ADO62659.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257069|gb|ADO62662.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257073|gb|ADO62664.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257075|gb|ADO62665.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257077|gb|ADO62666.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257079|gb|ADO62667.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257081|gb|ADO62668.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257083|gb|ADO62669.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257085|gb|ADO62670.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257087|gb|ADO62671.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257089|gb|ADO62672.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257091|gb|ADO62673.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257097|gb|ADO62676.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257101|gb|ADO62678.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257103|gb|ADO62679.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257109|gb|ADO62682.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257113|gb|ADO62684.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257115|gb|ADO62685.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257125|gb|ADO62690.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257127|gb|ADO62691.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257129|gb|ADO62692.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257131|gb|ADO62693.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257133|gb|ADO62694.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257135|gb|ADO62695.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257137|gb|ADO62696.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257139|gb|ADO62697.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257141|gb|ADO62698.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257143|gb|ADO62699.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257145|gb|ADO62700.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257147|gb|ADO62701.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257149|gb|ADO62702.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257151|gb|ADO62703.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257153|gb|ADO62704.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257157|gb|ADO62706.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257159|gb|ADO62707.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257161|gb|ADO62708.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257163|gb|ADO62709.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|328693109|gb|AEB38166.1| HUA1 [Helianthus exilis]
Length = 64
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 65.1 bits (157), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 53
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|12323533|gb|AAG51745.1|AC068667_24 zinc finger protein, putative; 86473-88078 [Arabidopsis thaliana]
Length = 287
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP-DCGYYL 99
+S YP RPGE +CLFY + LC +GS C +NHP +E+P R G+ DC
Sbjct: 125 SSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPL--------QEIPCRIGKKLDC---- 172
Query: 100 KTGTCKYGSTCKYHHPKDRNG 120
K G CK GS C ++HPK+R+G
Sbjct: 173 KAGACKRGSNCPFNHPKERDG 193
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTCKYGAD 268
S L +R Q G+ ++M + S P RP + +C +YM C++G++
Sbjct: 92 SRLWQRARTQDRRGSESRMMFDGRTQWSHAPVLSSAYPVRPGEDNCLFYMKNHLCEWGSE 151
Query: 269 CKFHHPKERIAQSAASNIGPL-GLPSRPGQAI-CSNYSMYGICKFGPTCRFDHP 320
C ++HP PL +P R G+ + C G CK G C F+HP
Sbjct: 152 CCYNHP-------------PLQEIPCRIGKKLDCK----AGACKRGSNCPFNHP 188
>gi|328693057|gb|AEB38140.1| HUA1 [Helianthus petiolaris]
gi|328693059|gb|AEB38141.1| HUA1 [Helianthus petiolaris]
Length = 64
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
+++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
F+ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
++LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 53
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 40.0 bits (92), Expect = 2.4, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693111|gb|AEB38167.1| HUA1 [Helianthus exilis]
Length = 64
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQSAAS-NIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA AS N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 64.7 bits (156), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTG 53
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
L AS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LFASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 40.0 bits (92), Expect = 2.1, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693041|gb|AEB38132.1| HUA1 [Helianthus petiolaris]
gi|328693045|gb|AEB38134.1| HUA1 [Helianthus petiolaris]
gi|328693065|gb|AEB38144.1| HUA1 [Helianthus paradoxus]
gi|328693067|gb|AEB38145.1| HUA1 [Helianthus paradoxus]
gi|328693069|gb|AEB38146.1| HUA1 [Helianthus paradoxus]
gi|328693075|gb|AEB38149.1| HUA1 [Helianthus paradoxus]
gi|328693079|gb|AEB38151.1| HUA1 [Helianthus paradoxus]
gi|328693085|gb|AEB38154.1| HUA1 [Helianthus paradoxus]
gi|328693087|gb|AEB38155.1| HUA1 [Helianthus paradoxus]
gi|328693089|gb|AEB38156.1| HUA1 [Helianthus exilis]
gi|328693091|gb|AEB38157.1| HUA1 [Helianthus exilis]
gi|328693093|gb|AEB38158.1| HUA1 [Helianthus exilis]
gi|328693095|gb|AEB38159.1| HUA1 [Helianthus exilis]
gi|328693101|gb|AEB38162.1| HUA1 [Helianthus exilis]
gi|328693103|gb|AEB38163.1| HUA1 [Helianthus exilis]
gi|328693105|gb|AEB38164.1| HUA1 [Helianthus exilis]
gi|328693107|gb|AEB38165.1| HUA1 [Helianthus exilis]
Length = 65
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
C+F
Sbjct: 62 CKF 64
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.9 bits (89), Expect = 4.8, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 39 PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|302853185|ref|XP_002958109.1| hypothetical protein VOLCADRAFT_107956 [Volvox carteri f.
nagariensis]
gi|300256577|gb|EFJ40840.1| hypothetical protein VOLCADRAFT_107956 [Volvox carteri f.
nagariensis]
Length = 1304
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
+ P RP + C +Y+ TG CK+G C F HP + A + LGLP RP + IC+
Sbjct: 1181 REFPRRPGKQLCDFYVKTGHCKFGESCVFDHP-----ELYAVRLTALGLPLRPEEQICTF 1235
Query: 303 YSMYGICKFGPTCRFDHP 320
Y C+FGP C+F HP
Sbjct: 1236 YLKNNECRFGPACKFHHP 1253
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK 138
GA E P R G+ C +Y+KTG CK+G +C + HP+ V LGLP+R +E+
Sbjct: 1176 GAVMVREFPRRPGKQLCDFYVKTGHCKFGESCVFDHPE----LYAVRLTALGLPLRPEEQ 1231
Query: 139 SCPYYMRTGS--FLPSSGLQ-------YAGSL 161
C +Y++ F P+ YAGSL
Sbjct: 1232 ICTFYLKNNECRFGPACKFHHPPLRPVYAGSL 1263
Score = 42.7 bits (99), Expect = 0.29, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 234 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
+++ + ++ LP RP++ C +Y+ C++G CKFHHP R
Sbjct: 1213 ELYAVRLTALGLPLRPEEQICTFYLKNNECRFGPACKFHHPPLR 1256
>gi|328693049|gb|AEB38136.1| HUA1 [Helianthus petiolaris]
gi|328693051|gb|AEB38137.1| HUA1 [Helianthus petiolaris]
gi|328693053|gb|AEB38138.1| HUA1 [Helianthus petiolaris]
gi|328693055|gb|AEB38139.1| HUA1 [Helianthus petiolaris]
gi|328693061|gb|AEB38142.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
+++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
C+F
Sbjct: 62 CKF 64
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
F+ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
++LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 39.3 bits (90), Expect = 3.6, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 39 PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|452819110|gb|EME26200.1| putative zinc-finger protein [Galdieria sulphuraria]
Length = 494
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
N E + + YP R PDC++Y +TG C YG+ C++NHP + L +
Sbjct: 184 NSEDNQLNSSYKYPIRRSRPDCIYYLKTGKCSYGTKCKYNHPPRD-------QTLVKALS 236
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ +C +L+ G C YG CKY HP ++G
Sbjct: 237 RRECFDFLQFGRCPYGKKCKYSHPNRQHG 265
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 25/105 (23%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-PK 275
SNL+ S NQ + SS P R +PDC YY+ TG C YG CK++H P+
Sbjct: 180 SNLVNSEDNQLN------------SSYKYPIRRSRPDCIYYLKTGKCSYGTKCKYNHPPR 227
Query: 276 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++ A S + C ++ +G C +G C++ HP
Sbjct: 228 DQTLVKALS------------RRECFDFLQFGRCPYGKKCKYSHP 260
>gi|328693071|gb|AEB38147.1| HUA1 [Helianthus paradoxus]
gi|328693073|gb|AEB38148.1| HUA1 [Helianthus paradoxus]
gi|328693077|gb|AEB38150.1| HUA1 [Helianthus paradoxus]
Length = 65
Score = 68.9 bits (167), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
C+F
Sbjct: 62 CKF 64
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R + C +YM+TG
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTG 54
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSDPQCAFYMKTGKCKFGLTCKFH 65
>gi|242036657|ref|XP_002465723.1| hypothetical protein SORBIDRAFT_01g044515 [Sorghum bicolor]
gi|241919577|gb|EER92721.1| hypothetical protein SORBIDRAFT_01g044515 [Sorghum bicolor]
Length = 155
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+ A N + R + D + Q YP RPG+PDC Y + G C Y S C FNHP
Sbjct: 30 KGAANKHHSAARTTLQDQ-----IYQQQKYPERPGQPDCQHYMQFGKCKYQSECIFNHPK 84
Query: 75 YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
A + E P +Y++TGT ++GS C+++H KDR
Sbjct: 85 DTLSSAWHPAECP---------FYMETGTYQFGSACEFYHAKDR 119
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
Q PERP QPDC++YM G CKY ++C F+HPK+ L S A C
Sbjct: 52 QKYPERPGQPDCQHYMQFGKCKYQSECIFNHPKDT-------------LSSAWHPAECPF 98
Query: 303 YSMYGICKFGPTCRFDH 319
Y G +FG C F H
Sbjct: 99 YMETGTYQFGSACEFYH 115
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPY 142
+++ PER GQPDC +Y++ G CKY S C ++HPKD L CP+
Sbjct: 51 QQKYPERPGQPDCQHYMQFGKCKYQSECIFNHPKDT------------LSSAWHPAECPF 98
Query: 143 YMRTGSFLPSSGLQY 157
YM TG++ S ++
Sbjct: 99 YMETGTYQFGSACEF 113
>gi|309257027|gb|ADO62641.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 68.2 bits (165), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-----LPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E LPE +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM+TG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTG 53
Score = 48.9 bits (115), Expect = 0.005, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPE P +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLTCKFH 64
>gi|328693113|gb|AEB38168.1| HUA1 [Helianthus tuberosus]
gi|328693115|gb|AEB38169.1| HUA1 [Helianthus tuberosus]
gi|328693117|gb|AEB38170.1| HUA1 [Helianthus tuberosus]
gi|328693119|gb|AEB38171.1| HUA1 [Helianthus tuberosus]
gi|328693121|gb|AEB38172.1| HUA1 [Helianthus tuberosus]
gi|328693123|gb|AEB38173.1| HUA1 [Helianthus tuberosus]
gi|328693125|gb|AEB38174.1| HUA1 [Helianthus tuberosus]
gi|328693127|gb|AEB38175.1| HUA1 [Helianthus tuberosus]
gi|328693131|gb|AEB38177.1| HUA1 [Helianthus tuberosus]
gi|328693133|gb|AEB38178.1| HUA1 [Helianthus tuberosus]
gi|328693135|gb|AEB38179.1| HUA1 [Helianthus tuberosus]
gi|328693137|gb|AEB38180.1| HUA1 [Helianthus tuberosus]
gi|328693139|gb|AEB38181.1| HUA1 [Helianthus tuberosus]
gi|328693141|gb|AEB38182.1| HUA1 [Helianthus tuberosus]
gi|328693143|gb|AEB38183.1| HUA1 [Helianthus tuberosus]
gi|328693145|gb|AEB38184.1| HUA1 [Helianthus tuberosus]
gi|328693147|gb|AEB38185.1| HUA1 [Helianthus tuberosus]
gi|328693149|gb|AEB38186.1| HUA1 [Helianthus tuberosus]
gi|328693151|gb|AEB38187.1| HUA1 [Helianthus tuberosus]
gi|328693153|gb|AEB38188.1| HUA1 [Helianthus tuberosus]
gi|328693157|gb|AEB38190.1| HUA1 [Helianthus tuberosus]
gi|328693159|gb|AEB38191.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 68.2 bits (165), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T +CK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
C+F
Sbjct: 62 CKF 64
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT +CK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.9 bits (89), Expect = 5.4, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 39 PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|309257031|gb|ADO62643.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 68.2 bits (165), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTGKCKFGLT 60
Query: 315 CRF 317
C+F
Sbjct: 61 CKF 63
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPE +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM+TG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTG 53
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPE P +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPESPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693129|gb|AEB38176.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
C+
Sbjct: 62 CKL 64
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK H
Sbjct: 62 CKLH 65
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CK H
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKLH 65
>gi|309257093|gb|ADO62674.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257095|gb|ADO62675.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 61
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 315 C 315
C
Sbjct: 61 C 61
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 C 110
C
Sbjct: 61 C 61
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 53
Score = 44.3 bits (103), Expect = 0.11, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADC 269
LSAS N LPERP +P C +YM TG CK+G C
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTC 61
>gi|302832796|ref|XP_002947962.1| hypothetical protein VOLCADRAFT_103744 [Volvox carteri f.
nagariensis]
gi|300266764|gb|EFJ50950.1| hypothetical protein VOLCADRAFT_103744 [Volvox carteri f.
nagariensis]
Length = 315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +++ TGTC YG CKF HP +R + G P R + C++Y G C FGP
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDR----PPPQLNTRGYPIRADEPDCAHYLKKGWCAFGP 179
Query: 314 TCRFDHPYAGYPI--NYGLSLPPLSILD 339
TC+F+HP I +YGLS PP + +
Sbjct: 180 TCKFNHPEMQPSILNSYGLSQPPTAYVS 207
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+ RTG C YG C+F HP P R +PDC +YLK G C +G TCK+
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDRPPPQLNTRGYPIRADEPDCAHYLKKGWCAFGPTCKF 183
Query: 113 HHPK 116
+HP+
Sbjct: 184 NHPE 187
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
C ++++TGTC YG CK+ HP DR P N G P+R DE C +Y++ G
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDRP---PPQLNTRGYPIRADEPDCAHYLKKG 173
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP R EPDC Y + G C +G C+FNHP
Sbjct: 157 YPIRADEPDCAHYLKKGWCAFGPTCKFNHP 186
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
++ P R D+PDC +Y+ G C +G CKF+HP+
Sbjct: 154 TRGYPIRADEPDCAHYLKKGWCAFGPTCKFNHPE 187
>gi|328693063|gb|AEB38143.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CR 316
C+
Sbjct: 62 CK 63
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK H
Sbjct: 62 CKSH 65
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 47.0 bits (110), Expect = 0.018, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CK H
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKSH 65
>gi|328693155|gb|AEB38189.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y+ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAGKCKFGLT 61
Query: 315 CRF 317
C+F
Sbjct: 62 CKF 64
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+K G CK+G T
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+ KT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+ G
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAG 54
Score = 47.8 bits (112), Expect = 0.011, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM G CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKAGKCKFGLTCKFH 65
>gi|328693043|gb|AEB38133.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 65.9 bits (159), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
+F
Sbjct: 62 SKF 64
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
K+H
Sbjct: 62 SKFH 65
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 47.0 bits (110), Expect = 0.018, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G KFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTSKFH 65
>gi|328693047|gb|AEB38135.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T CK+G+ CKF+HPK++IA SA+ N G LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 315 CRF 317
C+F
Sbjct: 62 CKF 64
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP + +A ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT CK+GS CK++HPKD+ + S N + LP R E C +YM+TG
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTG 54
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 272
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVPELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.1 bits (87), Expect = 8.9, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 39 PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693081|gb|AEB38152.1| HUA1 [Helianthus paradoxus]
gi|328693083|gb|AEB38153.1| HUA1 [Helianthus paradoxus]
Length = 61
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTG 147
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTG 54
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Score = 41.2 bits (95), Expect = 0.90, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 238 LSASSQN----LPERPDQPDCRYYMNTGTCKYG 266
LSAS N LPERP +P C +YM TG CK+G
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFG 59
>gi|15220486|ref|NP_174250.1| putative zinc finger CCCH domain-containing protein 9 [Arabidopsis
thaliana]
gi|75268252|sp|Q9C7P4.1|C3H9_ARATH RecName: Full=Putative zinc finger CCCH domain-containing protein
9; Short=AtC3H9
gi|12323526|gb|AAG51738.1|AC068667_17 zinc finger protein, putative; 78337-80281 [Arabidopsis thaliana]
gi|332192984|gb|AEE31105.1| putative zinc finger CCCH domain-containing protein 9 [Arabidopsis
thaliana]
Length = 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 57/136 (41%), Gaps = 38/136 (27%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ 92
Q + Q+SPYP RPG+ DC FY + GLC Y S+CRFNHP Q ELP R
Sbjct: 41 QSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQ------ELPVR--- 91
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPS 152
CK H DRN A P + R+ E + RT
Sbjct: 92 ----------ICK--------HIMDRNVAEP-----MYQDWRESESERRFDERTQRTFGD 128
Query: 153 S------GLQYAGSLP 162
G++Y+G+ P
Sbjct: 129 ERTQRRYGIEYSGARP 144
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
P RP + DC++Y+ G C+Y + C+F+HP +R
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR 84
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 275 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
KER+ QS+ P RPG+ C Y G+C++ +CRF+HP
Sbjct: 43 KERMRQSSP-------YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>gi|223945565|gb|ACN26866.1| unknown [Zea mays]
Length = 212
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 187 VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL 245
+ P QG+ P+ W+ Y + P P + + + N A S
Sbjct: 1 MVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEY 60
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
PERP QP+C++++ +G CKY C++HHP+ R + + + P+GLP +P
Sbjct: 61 PERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKP 110
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 39 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 98
Query: 124 VSFNILGLPMR 134
+ +GLP++
Sbjct: 99 AGLSPIGLPIK 109
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C Y CR++HP
Sbjct: 60 YPERPGQPECQHFVKSGFCKYRMKCRYHHP 89
>gi|224123158|ref|XP_002330353.1| predicted protein [Populus trichocarpa]
gi|222871557|gb|EEF08688.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 8/54 (14%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+EE +W+L + + + S YP R E DC++Y RTG CGYG+ CR+NHP
Sbjct: 28 LEEGVWQLGLGETE--------SEYPERSNEQDCMYYLRTGFCGYGARCRYNHP 73
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
E PER+ + DC YYL+TG C YG+ C+Y+HP+DRN G
Sbjct: 43 EYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAEG 80
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 280
L G L + PER ++ DC YY+ TG C YGA C+++HP++R A+
Sbjct: 28 LEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAE 79
>gi|326513767|dbj|BAJ87902.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 88
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
G Q+ PY RPGEPDC +Y RTGLC +G +C FNHP Q LP
Sbjct: 6 TMNSGVTMQSGPYHVRPGEPDCTYYLRTGLCSFGMSCTFNHP----QDRNTVSRLP---- 57
Query: 92 QPDCGYYLKTGTCKYGSTCKYHH 114
P + L TC S ++ H
Sbjct: 58 LPAVVFILLCFTCSQSSRLRFPH 80
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG-----PVSFNILGLPMRQDEK 138
R G+PDC YYL+TG C +G +C ++HP+DRN V F +L Q +
Sbjct: 21 RPGEPDCTYYLRTGLCSFGMSCTFNHPQDRNTVSRLPLPAVVFILLCFTCSQSSR 75
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 300
RP +PDC YY+ TG C +G C F+HP++R + + L LP+ +C
Sbjct: 21 RPGEPDCTYYLRTGLCSFGMSCTFNHPQDR------NTVSRLPLPAVVFILLC 67
>gi|413947009|gb|AFW79658.1| hypothetical protein ZEAMMB73_788382, partial [Zea mays]
Length = 96
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
E+LPER G+ DC YYL+TG C YG C+Y+HP+DR PVS ++
Sbjct: 36 EKLPERPGEADCTYYLRTGACGYGERCRYNHPRDR--PAPVSASL 78
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCTYYLRTGACGYGERCRYN 65
Query: 273 HPKERIAQSAAS 284
HP++R A +AS
Sbjct: 66 HPRDRPAPVSAS 77
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RPG+A C+ Y G C +G CR++HP
Sbjct: 38 LPERPGEADCTYYLRTGACGYGERCRYNHP 67
>gi|413947006|gb|AFW79655.1| hypothetical protein ZEAMMB73_121035 [Zea mays]
Length = 132
Score = 58.2 bits (139), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
G + LPER G+ DCGYYL+TG C +G C+Y+HP+DR G
Sbjct: 51 GQEANARLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGG 92
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE DC +Y RTG CG+G CR+NHP
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHP 87
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
++ LPERP + DC YY+ TG C +G C+++HP++R
Sbjct: 54 ANARLPERPGEADCGYYLRTGACGFGERCRYNHPRDR 90
Score = 39.3 bits (90), Expect = 3.9, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RPG+A C Y G C FG CR++HP
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHP 87
>gi|186479025|ref|NP_174249.2| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332192982|gb|AEE31103.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 572
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
Query: 45 PAR-PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
P R PGE +C R C G +CR+NHP Q ELP RN C Y+L+ G
Sbjct: 215 PVRWPGE-ECWCLR----CRNGGSCRYNHPTQLPQ------ELPVRNRLQICRYFLR-GY 262
Query: 104 CKYGSTCKYHHPKDRNGAGPV----SFNI 128
CK+GS C + H +DR+ A P+ SF++
Sbjct: 263 CKFGSVCGFQHIRDRDVAEPMYENWSFDV 291
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
C+ G C+++HP + P LP R IC Y + G CKFG C F H
Sbjct: 228 CRNGGSCRYNHPTQ----------LPQELPVRNRLQIC-RYFLRGYCKFGSVCGFQH 273
>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1276
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
FHHPK+ ++ GLP RPG+ +C++Y G C GPTC FDHP
Sbjct: 1084 FHHPKDTETSVPEGSLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 70 FNHP----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
F+HP +G+ E LP R G+P C Y TG+C G TC + HP
Sbjct: 1084 FHHPKDTETSVPEGSLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
Score = 40.0 bits (92), Expect = 2.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
S + + LP RP +P C Y +TG+C G C F HP
Sbjct: 1098 SLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
>gi|255077605|ref|XP_002502437.1| Endoribonuclease/protein kinase [Micromonas sp. RCC299]
gi|226517702|gb|ACO63695.1| Endoribonuclease/protein kinase [Micromonas sp. RCC299]
Length = 1053
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
YP RPGEPDC+F+ +TG C +G+ C+FNHP+
Sbjct: 1019 YPVRPGEPDCVFWIKTGRCKFGAGCKFNHPS 1049
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
+S P RP +PDC +++ TG CK+GA CKF+HP
Sbjct: 1015 TSVEYPVRPGEPDCVFWIKTGRCKFGAGCKFNHP 1048
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
E P R G+PDC +++KTG CK+G+ CK++HP +G
Sbjct: 1018 EYPVRPGEPDCVFWIKTGRCKFGAGCKFNHPSGLHG 1053
>gi|308800900|ref|XP_003075231.1| endoribonuclease/protein kinase IRE1-like protein (ISS)
[Ostreococcus tauri]
gi|116061785|emb|CAL52503.1| endoribonuclease/protein kinase IRE1-like protein (ISS), partial
[Ostreococcus tauri]
Length = 971
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 276
Q PERP + C +YM TG CK+GA C+FHHP++
Sbjct: 924 QIFPERPGRELCEFYMKTGRCKFGASCRFHHPRD 957
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
PER G+ C +Y+KTG CK+G++C++HHP+D
Sbjct: 926 FPERPGRELCEFYMKTGRCKFGASCRFHHPRD 957
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P RPG C FY +TG C +G++CRF+HP
Sbjct: 926 FPERPGRELCEFYMKTGRCKFGASCRFHHP 955
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+ P P RPG+ +C Y G CKFG +CRF HP
Sbjct: 921 VAPQIFPERPGRELCEFYMKTGRCKFGASCRFHHP 955
>gi|147795077|emb|CAN60857.1| hypothetical protein VITISV_026075 [Vitis vinifera]
Length = 300
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL--GLPSRPGQAICSNYSMYGICKF 311
CR + + +C+YGA C+F H KE + PL + +RP +C +++ G C +
Sbjct: 144 CRSWEDLASCRYGAKCQFAHGKEELR--------PLRYSMRTRPEGNVCKQFAVTGTCPY 195
Query: 312 GPTCRFDH 319
GP CRF H
Sbjct: 196 GPRCRFSH 203
>gi|440302333|gb|ELP94655.1| tristetraproline, putative [Entamoeba invadens IP1]
Length = 211
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y+ TGTC+YGA C+F H + P+ R IC + G CK+G
Sbjct: 115 CRSYVETGTCRYGAKCQFAH--------GEKELRPVQRHPRYKTEICQTFQQTGSCKYGS 166
Query: 314 TCRFDH 319
CRF H
Sbjct: 167 RCRFIH 172
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C YG+ C+F H + Q Y+ E+ C + +TG+CKYGS
Sbjct: 115 CRSYVETGTCRYGAKCQFAHGEKELRPVQRHPRYKTEI--------CQTFQQTGSCKYGS 166
Query: 109 TCKYHH 114
C++ H
Sbjct: 167 RCRFIH 172
>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1108
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 277
LPERP P+C +YM G C G DCKFHHP++R
Sbjct: 1051 LPERPGLPECLFYMKRGYCILGNDCKFHHPRDR 1083
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
LPER G P+C +Y+K G C G+ CK+HHP+DR P
Sbjct: 1051 LPERPGLPECLFYMKRGYCILGNDCKFHHPRDRETNVP 1088
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPG P+CLFY + G C G++C+F+HP
Sbjct: 1052 PERPGLPECLFYMKRGYCILGNDCKFHHP 1080
>gi|413916357|gb|AFW56289.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 65 GSNCRFNHPAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
G+ + PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 81 GAGEKPRAPAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 286
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|309256921|gb|ADO62588.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256923|gb|ADO62589.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
Length = 52
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRT 146
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKT 52
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 303
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKT 101
++ +T C +GS C+FNHP E ELPER +P C +Y+KT
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKT 52
>gi|309256989|gb|ADO62622.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257065|gb|ADO62660.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257067|gb|ADO62661.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257117|gb|ADO62686.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257119|gb|ADO62687.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257121|gb|ADO62688.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257123|gb|ADO62689.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257155|gb|ADO62705.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|328693097|gb|AEB38160.1| HUA1 [Helianthus exilis]
gi|328693099|gb|AEB38161.1| HUA1 [Helianthus exilis]
Length = 51
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 303
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 52.0 bits (123), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMR 145
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMK 51
Score = 41.6 bits (96), Expect = 0.67, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLK 100
++ +T C +GS C+FNHP E ELPER +P C +Y+K
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMK 51
>gi|167378199|ref|XP_001734711.1| tristetraproline [Entamoeba dispar SAW760]
gi|165903659|gb|EDR29114.1| tristetraproline, putative [Entamoeba dispar SAW760]
Length = 211
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ TGTC+YG C+F H ++ + P+ R IC + G CK+G
Sbjct: 111 CRSFVETGTCRYGNKCQFAHGEKELR--------PVQRHPRYKTEICQTFHQTGTCKYGS 162
Query: 314 TCRFDHPYAGYP 325
CRF H G P
Sbjct: 163 RCRFIHVLPGEP 174
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YG+ C+F H + Q Y+ E+ C + +TGTCKYGS
Sbjct: 111 CRSFVETGTCRYGNKCQFAHGEKELRPVQRHPRYKTEI--------CQTFHQTGTCKYGS 162
Query: 109 TCKYHH 114
C++ H
Sbjct: 163 RCRFIH 168
>gi|309257071|gb|ADO62663.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257105|gb|ADO62680.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257107|gb|ADO62681.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257111|gb|ADO62683.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 50
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 303
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYM 144
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYM 50
Score = 40.0 bits (92), Expect = 2.4, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYL 99
++ +T C +GS C+FNHP E ELPER +P C +Y+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYM 50
>gi|412988846|emb|CCO15437.1| predicted protein [Bathycoccus prasinos]
Length = 1073
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
QN P RP+ DC +Y+ TG CKYG CKF+HP
Sbjct: 1034 QNFPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P RP DC FY +TG C YG C+FNHP
Sbjct: 1036 FPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R DC +Y+KTG CKYG TCK++HP
Sbjct: 1036 FPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 288 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P P RP C Y G CK+G TC+F+HP
Sbjct: 1033 PQNFPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
>gi|303275406|ref|XP_003056997.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461349|gb|EEH58642.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 481
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R GQP+C +Y+KTG CK+G TCK+HHP
Sbjct: 448 PSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 34 EGGGVAQASP---YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
E V A+P YP+RPG+P+C+FY +TG C +G C+F+HP
Sbjct: 434 ERAAVIDATPPVTYPSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHP 274
P RP QP+C +Y+ TG CK+G CKFHHP
Sbjct: 448 PSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 275 KERIAQSAASNIG--PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
++R A+ AA P+ PSRPGQ C Y G CKFG TC+F HP
Sbjct: 429 QKRAAERAAVIDATPPVTYPSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
>gi|183232062|ref|XP_652977.2| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|169802218|gb|EAL47591.2| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042890|gb|EKE41602.1| zinc finger protein, putative [Entamoeba nuttalli P19]
gi|449705641|gb|EMD45650.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 212
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ TGTC+YG C+F H ++ + P+ R IC + G CK+G
Sbjct: 112 CRSFVETGTCRYGNKCQFAHGEKELR--------PVQRHPRYKTEICQTFHQTGTCKYGS 163
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNS 371
CRF H G LS P + S N IS+T + S+++P + Q S
Sbjct: 164 RCRFIHVLPG-----ELSPAPDCVDISQSQNFSDISSTD------EDSNRLPVFEQLS 210
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YG+ C+F H + Q Y+ E+ C + +TGTCKYGS
Sbjct: 112 CRSFVETGTCRYGNKCQFAHGEKELRPVQRHPRYKTEI--------CQTFHQTGTCKYGS 163
Query: 109 TCKYHH 114
C++ H
Sbjct: 164 RCRFIH 169
>gi|205688000|sp|A3CEM4.2|C3H64_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
64; Short=OsC3H64
gi|108862135|gb|ABG21865.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza sativa
Japonica Group]
Length = 527
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 200 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMN 259
N + G + ++ IAG ++ S + AG + +L Q PERP +P CRYYM
Sbjct: 167 NAHDGILDDINCAQIAGKHVGDHSNCANVIKAGV-ISLLGKLVQ-YPERPGEPFCRYYMK 224
Query: 260 TGTCKYGADCKFHHPKERIAQSAASNI 286
G CK+ CK++HPK+R + + I
Sbjct: 225 FGECKHMTFCKYNHPKDRFSCKTTNTI 251
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
PER G+P C YY+K G CK+ + CKY+HPKDR
Sbjct: 211 PERPGEPFCRYYMKFGECKHMTFCKYNHPKDR 242
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + YP RPGEP C +Y + G C + + C++NHP
Sbjct: 204 LGKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHP 239
>gi|309256991|gb|ADO62623.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 51
Score = 52.0 bits (123), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 303
Y++ T TCK+G+ CKF+HPK +IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 48.5 bits (114), Expect = 0.007, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMR 145
Y+LKT TCK+GS CK++HPK + + S N +L LP R E C +YM+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFYMK 51
Score = 45.1 bits (105), Expect = 0.063, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLK 100
++ +T C +GS C+FNHP Y E ELPER +P C +Y+K
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFYMK 51
>gi|147841870|emb|CAN78097.1| hypothetical protein VITISV_040387 [Vitis vinifera]
Length = 275
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYRE---ELPERNGQP 93
G+ Y R G DC++Y + G CG+GS CR+NH + + R E PER G+P
Sbjct: 28 GLRSRESYLERSGVADCVYYMKIGFCGFGSRCRYNHHRARSLISTLRSGRGEYPERIGEP 87
Query: 94 DCGYYL 99
+ L
Sbjct: 88 NIKEVL 93
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
A G + RE ER+G DC YY+K G C +GS C+Y+H + R+
Sbjct: 25 VAVGLRSRESYLERSGVADCVYYMKIGFCGFGSRCRYNHHRARS 68
>gi|302790343|ref|XP_002976939.1| hypothetical protein SELMODRAFT_416803 [Selaginella moellendorffii]
gi|300155417|gb|EFJ22049.1| hypothetical protein SELMODRAFT_416803 [Selaginella moellendorffii]
Length = 425
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG+C+YG C+F H KE ++ P+ + +C +S G C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--------DLRPVNRHPKYKTEVCRTFSAAGTCPYGK 67
Query: 314 TCRFDHPYAGYPINYGLSLPPL 335
CRF H P + LPPL
Sbjct: 68 RCRFIH---ATPKLSDVKLPPL 86
>gi|449703488|gb|EMD43930.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 202
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
+NQ + YP + CLF++R G C G C F+H G Q+
Sbjct: 110 ENQLILEYSHQDKYPNKWRTQPCLFFQRYGFCRKGDECNFSHEI-PISGKQFVSVDKLFR 168
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHH 114
+P C Y+ TGTC+ G C Y H
Sbjct: 169 TKP-CKYFFTTGTCRKGENCNYSH 191
>gi|449015411|dbj|BAM78813.1| unknown zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 647
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ TG C+YG+ C+F H +E + PL + +C N++ G C +G
Sbjct: 245 CRSWIETGACRYGSKCQFAHGQE--------ELRPLPRHPKYKTKVCKNFAENGSCPYGS 296
Query: 314 TCRFDH 319
CRF H
Sbjct: 297 RCRFIH 302
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE--RNGQPDCGYYLKTGTCKYGSTC 110
C + TG C YGS C+F H G + LP + C + + G+C YGS C
Sbjct: 245 CRSWIETGACRYGSKCQFAH------GQEELRPLPRHPKYKTKVCKNFAENGSCPYGSRC 298
Query: 111 KYHHPKDRNGA 121
++ H + R G+
Sbjct: 299 RFIHERTRTGS 309
>gi|443704541|gb|ELU01558.1| hypothetical protein CAPTEDRAFT_157003 [Capitella teleta]
Length = 740
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR-EELPERNGQPD---CGYYLKTGTCKYG 107
DC +R TG+C +G++CR++H + + + E+ P + + + C + +TG C+YG
Sbjct: 72 DCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKPKKEIRICSAFERTGKCRYG 131
Query: 108 STCKYHH 114
C+Y H
Sbjct: 132 EGCRYSH 138
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRF------NHPAYAAQGAQYREEL------P 87
Q S P RP + C FYR+ G+C G++C + NH A A L
Sbjct: 7 QRSNSPTRPSDQICRFYRK-GICLRGTSCSYLHQSDQNHEAVIATPEAVDPVLDPPQIQQ 65
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP--KDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
+ + DC + TG C++G++C+Y H D++ + P +++ + C + R
Sbjct: 66 QPKQRKDCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKP-KKEIRICSAFER 124
Query: 146 TGSFLPSSGLQYAGSLP 162
TG G +Y+ +P
Sbjct: 125 TGKCRYGEGCRYSHVIP 141
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIA-QSAASNIGPLGLPSRPGQAICSNYSMYGIC 309
+ DC + +TG C++G C++ H + + P+ P + + ICS + G C
Sbjct: 70 RKDCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKPKKEIR-ICSAFERTGKC 128
Query: 310 KFGPTCRFDH 319
++G CR+ H
Sbjct: 129 RYGEGCRYSH 138
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN---IGPL-- 289
M S N P RP CR+Y G C G C + H ++ ++ + + P+
Sbjct: 1 MSTSSLQRSNSPTRPSDQICRFY-RKGICLRGTSCSYLHQSDQNHEAVIATPEAVDPVLD 59
Query: 290 ---GLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+ C + GIC+FG +CR+ H
Sbjct: 60 PPQIQQQPKQRKDCHVFRDTGICRFGNSCRYSH 92
>gi|28393414|gb|AAO42129.1| unknown protein [Arabidopsis thaliana]
Length = 151
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 277 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 1 RVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
LP R G C +Y++ G CK+GSTCK+ HP
Sbjct: 15 LPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 278
LP RP C +Y+ G CK+G+ CKF HP I
Sbjct: 15 LPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTI 48
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPG C FY + G C +GS C+F+HP
Sbjct: 16 PLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
>gi|309257099|gb|ADO62677.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 51
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 303
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFY 49
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMR 145
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMK 51
Score = 38.9 bits (89), Expect = 4.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLK 100
++ +T C +GS C+FNHP E ELPE +P C +Y+K
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMK 51
>gi|407036780|gb|EKE38337.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 138
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
+NQ + YP + CLF++R G C G C F+H G Q+
Sbjct: 46 ENQLILEYSHQDKYPNKWRTQPCLFFQRYGFCRKGDECNFSHEI-PVSGKQFVSVDKLFR 104
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHH 114
+P C Y+ TGTC+ G C Y H
Sbjct: 105 TKP-CKYFFTTGTCRKGENCNYSH 127
>gi|309257035|gb|ADO62645.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 50
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 256 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 303
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPQCAFY 49
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYM 144
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPQCAFYM 50
>gi|449493048|ref|XP_004159177.1| PREDICTED: uncharacterized protein LOC101231961 [Cucumis sativus]
Length = 286
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQ-YREELPERNGQPDCGYYLKTG 102
YP RPGE DC Y T C +G +C+F+HP + +G +E P + C YL+ G
Sbjct: 158 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEFPFKFSFLICFTYLQRG 217
Query: 103 T 103
Sbjct: 218 V 218
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 241 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHP 274
S+ NLP +RP + DC +YM T TCK+G CKF HP
Sbjct: 151 STSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P+R G+ DC +Y+ T TCK+G +CK+ HP
Sbjct: 159 PQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 292 PSRPGQAICSNYSMYGICKFGPTCRFDHP 320
P RPG+ C++Y + CKFG +C+FDHP
Sbjct: 159 PQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
>gi|440291931|gb|ELP85173.1| hypothetical protein EIN_082550 [Entamoeba invadens IP1]
Length = 289
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + PY + CLFY+R G C G C F H + G Q+ +P
Sbjct: 156 EQLDIPLQEPYQNKWRTQPCLFYQRYGFCRKGDECNFQH--IPSTGKQFISVDQLYRTKP 213
Query: 94 DCGYYLKTGTCKYGSTCKYHH 114
C Y+ TGTC+ G C Y H
Sbjct: 214 -CKYFFTTGTCRKGDNCNYSH 233
>gi|302797845|ref|XP_002980683.1| hypothetical protein SELMODRAFT_112852 [Selaginella moellendorffii]
gi|300151689|gb|EFJ18334.1| hypothetical protein SELMODRAFT_112852 [Selaginella moellendorffii]
Length = 119
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG+C+YG C+F H KE ++ P+ + +C +S G C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--------DLRPVNRHPKYKTEVCRTFSAAGTCPYGK 67
Query: 314 TCRFDHPYAGYPINYGLSLPPL 335
CRF H P + LPPL
Sbjct: 68 RCRFIH---ATPKLSDVKLPPL 86
>gi|145479755|ref|XP_001425900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392972|emb|CAK58502.1| unnamed protein product [Paramecium tetraurelia]
Length = 155
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+Y+ G C YG C F H K + Q + +P IC NY+ G C +G
Sbjct: 54 CKYWSIEGYCPYGKQCAFAHGKHEVRQK-------VHVPHNYKTQICKNYTKDGYCCYGE 106
Query: 314 TCRFDHPYAGYPINYGLSLPPLS 336
C+F HP G LPPL+
Sbjct: 107 RCQFKHPEKK-----GNKLPPLT 124
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKT 101
+ + + C ++ G C YG C F H + + + +P C Y K
Sbjct: 43 TSFIVKVKTEICKYWSIEGYCPYGKQCAFAHGKHEVRQ---KVHVPHNYKTQICKNYTKD 99
Query: 102 GTCKYGSTCKYHHPKDR-NGAGPVSF-----NILGLPMRQD 136
G C YG C++ HP+ + N P+++ NI L ++Q+
Sbjct: 100 GYCCYGERCQFKHPEKKGNKLPPLTYQNLLNNIENLFLKQN 140
>gi|145483383|ref|XP_001427714.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394797|emb|CAK60316.1| unnamed protein product [Paramecium tetraurelia]
Length = 157
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+Y+ G C YG C F H K+ + Q + +PS C NY+ G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK-------VHVPSNYKTKTCKNYTQDGYCCYGE 103
Query: 314 TCRFDHPYAGY----PINYGLSLPPLSILDSS 341
C+F HP I Y + L +++L +S
Sbjct: 104 RCQFKHPEKKTNKLPTIPYQILLANINLLFAS 135
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ G C YG C F A+ + + +P C Y + G C YG C++
Sbjct: 51 CKYWAIEGYCPYGQQCAF---AHGKDEVRQKVHVPSNYKTKTCKNYTQDGYCCYGERCQF 107
Query: 113 HHPKDRNGAGP-VSFNIL 129
HP+ + P + + IL
Sbjct: 108 KHPEKKTNKLPTIPYQIL 125
>gi|145553048|ref|XP_001462199.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430037|emb|CAK94826.1| unnamed protein product [Paramecium tetraurelia]
Length = 157
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+Y+ G C YG C F H K+ + Q + +PS C NY+ G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK-------VHVPSNYKTKTCKNYTQDGYCCYGE 103
Query: 314 TCRFDHP 320
C+F HP
Sbjct: 104 RCQFKHP 110
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 4 NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCG 63
N+Q+ + + + E+I ++ + + + Y + C ++ G C
Sbjct: 2 NQQISCDEFDSNHSTKSCESISDEQLDEVMPSKKTNKKASYKVKVKTEICKYWAIEGYCP 61
Query: 64 YGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
YG C F A+ + + +P C Y + G C YG C++ HP+ ++ P
Sbjct: 62 YGQQCAF---AHGKDEVRQKVHVPSNYKTKTCKNYTQDGYCCYGERCQFKHPEKKSNKLP 118
Query: 124 -VSFNIL 129
+ + IL
Sbjct: 119 TIPYQIL 125
>gi|385301347|gb|EIF45541.1| tis11p [Dekkera bruxellensis AWRI1499]
Length = 403
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ ++R G C YGS C+F A+ Q + + +P C +++TGTC+YG C +
Sbjct: 311 CVQFQRNGYCPYGSKCQF---AHGEQELKRIKRCENWKTKP-CINWMRTGTCRYGKRCCF 366
Query: 113 HHPKDRNGAGPV 124
H + NG V
Sbjct: 367 KHGDEDNGTQLV 378
>gi|395331885|gb|EJF64265.1| hypothetical protein DICSQDRAFT_53924 [Dichomitus squalens LYAD-421
SS1]
Length = 887
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP----DCGYYLK 100
PARP CL+YR+ G C G +C+F+H + G + G+P CG+Y +
Sbjct: 9 PARP----CLYYRQ-GSCTRGVHCKFSHGIASPNGPPQSSQTVRDRGKPLVTTVCGFY-R 62
Query: 101 TGTCKYGSTCKYHHPKDRNG 120
GTC++G +C + HP +G
Sbjct: 63 QGTCRFGDSCLFSHPSSSSG 82
>gi|167524835|ref|XP_001746753.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775023|gb|EDQ88649.1| predicted protein [Monosiga brevicollis MX1]
Length = 391
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + NTG C+YG C+F H + + PL + +C + G+C +GP
Sbjct: 72 CRSWSNTGACRYGDKCQFAH--------GEAELRPLQRHPKYKTELCRTFHTQGVCPYGP 123
Query: 314 TCRFDH 319
C F H
Sbjct: 124 RCHFVH 129
>gi|145342006|ref|XP_001416089.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576313|gb|ABO94381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 457
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
Q P RP + C +YM TG CK+GA CKF HP+
Sbjct: 415 QVFPSRPGREPCEFYMKTGRCKFGATCKFDHPQ 447
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 286 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
I P PSRPG+ C Y G CKFG TC+FDHP
Sbjct: 412 IAPQVFPSRPGREPCEFYMKTGRCKFGATCKFDHP 446
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
P R G+ C +Y+KTG CK+G+TCK+ HP+
Sbjct: 417 FPSRPGREPCEFYMKTGRCKFGATCKFDHPQ 447
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P+RPG C FY +TG C +G+ C+F+HP
Sbjct: 417 FPSRPGREPCEFYMKTGRCKFGATCKFDHP 446
>gi|118357333|ref|XP_001011916.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila]
gi|89293683|gb|EAR91671.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila
SB210]
Length = 459
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ +++ G C+YG C+F H KE + I L + +CS Y +C++
Sbjct: 188 CKNWVSKGVCQYGQKCRFAHGKEEL-------IERLAMNKNYKTKLCSAYHKEQVCQYAA 240
Query: 314 TCRFDH 319
C F H
Sbjct: 241 RCHFKH 246
>gi|268554124|ref|XP_002635049.1| C. briggsae CBR-POS-1 protein [Caenorhabditis briggsae]
gi|52548268|gb|AAU82118.1| POS-1 [Caenorhabditis briggsae]
Length = 263
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R+
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRSAT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y + TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRSATCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 306 YGICKFGPTCRFDH 319
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|390332031|ref|XP_782924.3| PREDICTED: uncharacterized protein LOC577616 isoform 1
[Strongylocentrotus purpuratus]
Length = 886
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 254 CRYYMNTGTCKYGADCKFHHP-------KER------IAQSAASNIGPLGLPSRPGQAIC 300
C Y++ +G C YG +C+F HP +ER A++ AS+ G S+P Q +C
Sbjct: 124 CSYFVRSGRCSYGRNCRFLHPARPEGHSRERGSTAKPDAKTPASSTGDKAT-SQPKQ-VC 181
Query: 301 SNYSMYGICKFGPTCRFDH 319
Y+ G C +G CRF H
Sbjct: 182 KFYARSGWCSYGYRCRFSH 200
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 50 EPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG-------------QPD-- 94
E C ++ R+G C YG NCRF HPA ++ R + + QP
Sbjct: 121 EKVCSYFVRSGRCSYGRNCRFLHPARPEGHSRERGSTAKPDAKTPASSTGDKATSQPKQV 180
Query: 95 CGYYLKTGTCKYGSTCKYHH 114
C +Y ++G C YG C++ H
Sbjct: 181 CKFYARSGWCSYGYRCRFSH 200
>gi|452823861|gb|EME30868.1| zinc finger protein isoform 2 [Galdieria sulphuraria]
gi|452823862|gb|EME30869.1| zinc finger protein isoform 1 [Galdieria sulphuraria]
Length = 364
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR +M TG C+Y + C+F H E + P+ + +C N+ G C +G
Sbjct: 259 CRSFMETGFCRYHSKCQFAHGVEELR--------PVKRHPKYKTRLCKNFVENGTCPYGS 310
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLM----NHQAISATHSIETSPDASSK 363
CRF H +G GL L + + H + ++E D SK
Sbjct: 311 RCRFIHGSSGASSFEGLQTDLLLAVQGISLGKERRHSRLPVFQTLEEKSDIHSK 364
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C Y S C+F H + + + R C +++ GTC YGS C++
Sbjct: 259 CRSFMETGFCRYHSKCQFAHGVEELRPVKRHPKYKTRL----CKNFVENGTCPYGSRCRF 314
Query: 113 HH 114
H
Sbjct: 315 IH 316
>gi|170590238|ref|XP_001899879.1| Tristetraproline [Brugia malayi]
gi|158592511|gb|EDP31109.1| Tristetraproline, putative [Brugia malayi]
Length = 256
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 213 SIAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMN 259
++ G +L+ S + DL + S L ER + C+ + +
Sbjct: 3 AVIGQDLLREKPFDSGFKKSDLYIWQWFQFIHQSQVLLAERKQKRKAETHKTVPCQAWKD 62
Query: 260 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
TG C YG CKF H E + + + P R A C Y+ +G C +G C F H
Sbjct: 63 TGRCNYGKRCKFAHGPEELRPMPKTEVKIFSNP-RYRTAFCIKYTTFGYCPYGDQCHFIH 121
>gi|255071555|ref|XP_002499452.1| predicted protein [Micromonas sp. RCC299]
gi|226514714|gb|ACO60710.1| predicted protein [Micromonas sp. RCC299]
Length = 469
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TGTC+YGA C+F H ++ + P+ + +C ++ G C +G
Sbjct: 288 CRSWEETGTCRYGAKCQFSHGRD--------ELRPVLRHPKYKTEVCRTFAQNGTCPYGT 339
Query: 314 TCRFDH 319
CRF H
Sbjct: 340 RCRFIH 345
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG+ C+F+H R+EL P C + + GTC YG
Sbjct: 288 CRSWEETGTCRYGAKCQFSH---------GRDELRPVLRHPKYKTEVCRTFAQNGTCPYG 338
Query: 108 STCKYHH 114
+ C++ H
Sbjct: 339 TRCRFIH 345
>gi|402580615|gb|EJW74564.1| hypothetical protein WUBG_14528 [Wuchereria bancrofti]
Length = 253
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ +G C + +C+F H +E + N P+ P + +C Y+M G+C +G
Sbjct: 2 CQAWLESGICNFAENCRFAHGEEELR---PCNKLPMKNPKYKTK-LCDKYTMAGLCPYGD 57
Query: 314 TCRFDHPYAG 323
C F HP A
Sbjct: 58 RCLFIHPEAS 67
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN---GQPDCGYYLKTGTCKYGST 109
C + +G+C + NCRF A+ + + +LP +N C Y G C YG
Sbjct: 2 CQAWLESGICNFAENCRF---AHGEEELRPCNKLPMKNPKYKTKLCDKYTMAGLCPYGDR 58
Query: 110 CKYHHPKDRNGAGP 123
C + HP+ N + P
Sbjct: 59 CLFIHPEASNASNP 72
>gi|440798766|gb|ELR19831.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 740
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ TG C+YG+ C+F H ++ + P+ + IC + G C +G
Sbjct: 245 CRSFVETGACRYGSKCQFAHGRKELR--------PVLRHPKYKTEICKTFHTIGTCPYGT 296
Query: 314 TCRFDHPYAG 323
CRF H G
Sbjct: 297 RCRFIHKRPG 306
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YGS C+F H + +Y+ E+ C + GTC YG+
Sbjct: 245 CRSFVETGACRYGSKCQFAHGRKELRPVLRHPKYKTEI--------CKTFHTIGTCPYGT 296
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPM 133
C++ H R G + N + LP+
Sbjct: 297 RCRFIH--KRPGDSDIIDNSVILPV 319
>gi|186479027|ref|NP_001117380.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332192983|gb|AEE31104.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 413
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 26/89 (29%)
Query: 45 PAR-PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
P R PGE +C R C G +CR+NHP +LP+ C Y+L+ G
Sbjct: 65 PVRWPGE-ECWCLR----CRNGGSCRYNHPT----------QLPQ-----ICRYFLR-GY 103
Query: 104 CKYGSTCKYHHPKDRNGAGPV----SFNI 128
CK+GS C + H +DR+ A P+ SF++
Sbjct: 104 CKFGSVCGFQHIRDRDVAEPMYENWSFDV 132
>gi|297845872|ref|XP_002890817.1| hypothetical protein ARALYDRAFT_890483 [Arabidopsis lyrata subsp.
lyrata]
gi|297336659|gb|EFH67076.1| hypothetical protein ARALYDRAFT_890483 [Arabidopsis lyrata subsp.
lyrata]
Length = 473
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 24/86 (27%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYY 98
Q P RPGE +C R C G +CR+NHP +LP+ Y
Sbjct: 230 TQRRHEPVRPGE-ECWCLR----CRNGRSCRYNHPT----------QLPQ---------Y 265
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPV 124
+ G CK GS CK+ H +DR+ A +
Sbjct: 266 FRRGYCKLGSFCKFQHIRDRDVAETM 291
>gi|402592884|gb|EJW86811.1| hypothetical protein WUBG_02280 [Wuchereria bancrofti]
Length = 256
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 213 SIAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMN 259
++ G +L+ S + DL + S L ER + C+ + +
Sbjct: 3 AVIGQDLLREKPFDSGFEKSDLYIWQWFQFVYQSQVLLAERKQKRKAETHKTVPCQAWKD 62
Query: 260 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
TG C YG CKF H E + + + P R A C Y+ +G C +G C F H
Sbjct: 63 TGRCNYGKRCKFAHGPEELRPMPKAEVKIFSNP-RYRTAFCIKYTTFGYCPYGDQCHFIH 121
>gi|409051670|gb|EKM61146.1| hypothetical protein PHACADRAFT_134399 [Phanerochaete carnosa
HHB-10118-sp]
Length = 296
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQ----AICSNYSMY 306
P+C +Y G C G +C + HPKER + N G L PS P + +C NY +
Sbjct: 123 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVRRVVCQNY-LT 181
Query: 307 GICKFGPTCRFDHPYAGYPI 326
G C GP C HP P+
Sbjct: 182 GFCPLGPECPRGHPKPDLPL 201
>gi|312071645|ref|XP_003138704.1| tristetraproline [Loa loa]
gi|307766137|gb|EFO25371.1| tristetraproline [Loa loa]
Length = 266
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query: 206 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYY 257
+G S ++L + + DL + S L ER + C+ +
Sbjct: 10 LGEKSQDFSLKTSLSLTDFHNNDLYIWQWFQFIYQSQLLLAERKQKRKAETHKTVPCQAW 69
Query: 258 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 317
+TG C YG CKF H E + + + P R A+C Y+ +G C +G C F
Sbjct: 70 KDTGRCNYGKRCKFAHGPEELRPMPKAEVKVFNNP-RYRTALCIKYTTFGYCPYGDQCHF 128
Query: 318 DH 319
H
Sbjct: 129 IH 130
>gi|452819712|gb|EME26766.1| zinc finger protein [Galdieria sulphuraria]
Length = 278
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR +M TG C+YG C+F H E + Q + + C N+ G C +G
Sbjct: 170 CRSFMETGFCRYGVKCQFAHGTEELRQ--------VKRHPKYKTRYCRNFMKEGNCPYGS 221
Query: 314 TCRFDHPYAG 323
CRF H G
Sbjct: 222 RCRFIHRRRG 231
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG C+F H EEL + P C ++K G C YG
Sbjct: 170 CRSFMETGFCRYGVKCQFAHGT---------EELRQVKRHPKYKTRYCRNFMKEGNCPYG 220
Query: 108 STCKYHHPK 116
S C++ H +
Sbjct: 221 SRCRFIHRR 229
>gi|443705950|gb|ELU02246.1| hypothetical protein CAPTEDRAFT_213784 [Capitella teleta]
Length = 334
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH- 72
N D + A+ L ++ + + P PA+ C F++ G C YG++C F+H
Sbjct: 235 NDDHDLMTRALSVLHSGEDYDDDVYSSVGPSPAKKP---CFFFQDHGYCKYGADCYFSHD 291
Query: 73 -PAYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYHH 114
PA GA Y P++ D C ++L +C+YG C++ H
Sbjct: 292 VPAVPTGGATYTS--PQQRNTKDIPCRFFLN-DSCRYGDQCRFSH 333
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C ++ + G CKYGADC F H + A+ P R + I + + C++G
Sbjct: 271 CFFFQDHGYCKYGADCYFSHDVPAVPTGGATYTSP---QQRNTKDIPCRFFLNDSCRYGD 327
Query: 314 TCRFDH 319
CRF H
Sbjct: 328 QCRFSH 333
>gi|340710256|ref|XP_003393709.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Bombus terrestris]
Length = 419
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N G C+ G +C++ H + I +P P IC + +GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTEGAWNDETNETIISSSVP--PVNNIC-RFFKHGICKFGN 66
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 369
C F H N + S+ +SS H + IS + +I+ + D WV+
Sbjct: 67 QCYFRHTIESVDNNV---VNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEWVK 120
>gi|148225622|ref|NP_001081884.1| ZFP36 ring finger protein [Xenopus laevis]
gi|4580020|gb|AAD24207.1|AF061980_1 CCCH zinc finger protein C3H-1 [Xenopus laevis]
gi|51950038|gb|AAH82435.1| C3H-1 protein [Xenopus laevis]
gi|80477840|gb|AAI08849.1| C3H-1 protein [Xenopus laevis]
Length = 313
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TGTCKYGA C+F H K + + N P + +C + +YG C +G
Sbjct: 109 CRTFSETGTCKYGAKCQFAHGKIELRE---PNRHP-----KYKTELCHKFYLYGECPYGS 160
Query: 314 TCRFDH 319
C F H
Sbjct: 161 RCNFIH 166
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG+ C+F H + EL E N P C + G C YG
Sbjct: 109 CRTFSETGTCKYGAKCQFAHG---------KIELREPNRHPKYKTELCHKFYLYGECPYG 159
Query: 108 STCKY-HHPKDRNGAGPV---SFNILGLPMRQ 135
S C + HHP+++ + + S + G+P R+
Sbjct: 160 SRCNFIHHPREQGTSQHILRQSLSYSGVPTRR 191
>gi|403418466|emb|CCM05166.1| predicted protein [Fibroporia radiculosa]
Length = 281
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 125 PECWWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCQLGPTCPRKHVRRVACQLYLTG 184
Query: 308 ICKFGPTCRFDHPYAGYPINYGLSLPP 334
C GP C HP G P+ PP
Sbjct: 185 FCPMGPDCARGHPKPGVPLPEAYEPPP 211
>gi|307108237|gb|EFN56478.1| hypothetical protein CHLNCDRAFT_15825, partial [Chlorella
variabilis]
Length = 64
Score = 47.0 bits (110), Expect = 0.020, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG+C+YGA C+F H +E + P+ + +C ++ G C +G
Sbjct: 6 CRSWEETGSCRYGAKCQFAHGREELR--------PVLRHPKYKTEVCRTFAQSGTCPYGT 57
Query: 314 TCRFDH 319
CRF H
Sbjct: 58 RCRFIH 63
Score = 38.9 bits (89), Expect = 4.6, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG+ C+F H REEL P C + ++GTC YG
Sbjct: 6 CRSWEETGSCRYGAKCQFAHG---------REELRPVLRHPKYKTEVCRTFAQSGTCPYG 56
Query: 108 STCKYHH 114
+ C++ H
Sbjct: 57 TRCRFIH 63
>gi|308496473|ref|XP_003110424.1| CRE-POS-1 protein [Caenorhabditis remanei]
gi|308243765|gb|EFO87717.1| CRE-POS-1 protein [Caenorhabditis remanei]
Length = 261
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGDQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 19/77 (24%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGDQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 306 YGICKFGPTCRFDHPYA 322
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIHKLV 171
>gi|17543792|ref|NP_502805.1| Protein CCCH-5 [Caenorhabditis elegans]
gi|3881203|emb|CAB16528.1| Protein CCCH-5 [Caenorhabditis elegans]
Length = 199
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + T C YG CKF H E + Q N+G + P + +C N+S G CK+G
Sbjct: 74 CKTFQLTKACSYGEQCKFAHSVEEL-QLKHQNLG-INNP-KYKTVLCDNFSTTGHCKYGT 130
Query: 314 TCRFDH 319
C+F H
Sbjct: 131 KCQFIH 136
>gi|392891963|ref|NP_001254325.1| Protein MEX-1, isoform a [Caenorhabditis elegans]
gi|1899062|gb|AAC47486.1| MEX-1 [Caenorhabditis elegans]
gi|14530587|emb|CAA91362.2| Protein MEX-1, isoform a [Caenorhabditis elegans]
Length = 494
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 305
C + +G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 144 CDAFKRSGSCPYGEACRFAHGENE-----------LRMPSQPRGKAHPKYKTQLCDKFSN 192
Query: 306 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASS 362
+G C +GP C+F H + GL PLS + +L + A T+PD SS
Sbjct: 193 FGQCPYGPRCQFIH-----KLKKGL---PLSEYNRALQEGEISPARDDEITNPDESS 241
>gi|302782013|ref|XP_002972780.1| hypothetical protein SELMODRAFT_441970 [Selaginella moellendorffii]
gi|300159381|gb|EFJ26001.1| hypothetical protein SELMODRAFT_441970 [Selaginella moellendorffii]
Length = 872
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 20/69 (28%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
GE C+++RR G C G+ C F+H A C ++L C+YG+
Sbjct: 587 GEVQCVYFRR-GFCAKGNGCEFSHSAV-------------------CKFFLSGDGCRYGA 626
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 627 HCRYKHDSD 635
>gi|268533062|ref|XP_002631659.1| C. briggsae CBR-MEX-1 protein [Caenorhabditis briggsae]
Length = 405
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 34/144 (23%)
Query: 233 AQMHILSASSQNLPERPDQPD-------CRYYMNTGTCKYGADCKFHHPKERIAQSAASN 285
AQ ++ + L +R + + C + GTC YG C+F H +
Sbjct: 119 AQWETMTDDERELIQRQKRKEEAFKTALCDAFKRAGTCPYGETCRFAHGE---------- 168
Query: 286 IGPLGLPSRP-GQA-------ICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
L +PS+P G+A +C +S YG C +GP C+F H + GL PL
Sbjct: 169 -NELRMPSQPRGKAHPKYKTQLCDKFSTYGQCPYGPRCQFIH-----KLKKGL---PLLE 219
Query: 338 LDSSLMNHQAISATHSIETSPDAS 361
+ +L + A T+PD S
Sbjct: 220 YNRALFQGRISPAREDEITNPDES 243
>gi|302695329|ref|XP_003037343.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
gi|300111040|gb|EFJ02441.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
Length = 287
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 306
P+C +Y G C G +C + HPKER + +GP P + + I +
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGP-SCPRKHIRRIACQLYLT 179
Query: 307 GICKFGPTCRFDHPYAGYPINYGLSLPP 334
G C GP C HP G P LPP
Sbjct: 180 GFCPMGPDCPRGHPKPGLPPPEAYELPP 207
>gi|326433056|gb|EGD78626.1| hypothetical protein PTSG_01604 [Salpingoeca sp. ATCC 50818]
Length = 888
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR +++ CKYG C+F H +E + P+ + +C + G+C +GP
Sbjct: 243 CRAWLDGKVCKYGEKCQFAHGEEELR--------PIQRHPKYKTELCRTFHTTGVCPYGP 294
Query: 314 TCRFDH 319
C F H
Sbjct: 295 RCHFIH 300
>gi|154315641|ref|XP_001557143.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 739
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTG 102
PYP + +FY G C +G +CRF HPA + E PE +P C +L
Sbjct: 28 PYPCK----HFVFY---GECKWGLDCRFGHPA------RIHAENPEPT-RPACKNFLSRR 73
Query: 103 TCKYGSTCKYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
C+YG C HHP GA + L LP Q + P ++
Sbjct: 74 GCQYGWKCHSHHPVATEKGASSAT---LALPTSQFTMATPGILKAA 116
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C++++ G CK+G DC+F HP A++ P+RP C N+ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE--------PTRPA---CKNFLSRRGCQYGW 79
Query: 314 TCRFDHPYA 322
C HP A
Sbjct: 80 KCHSHHPVA 88
>gi|190348309|gb|EDK40740.2| hypothetical protein PGUG_04838 [Meyerozyma guilliermondii ATCC
6260]
Length = 156
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C YM G C YG C+F H E + Q + P S+P C N++ YG C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAHGTEELKQVSR----PPKWRSKP----CVNWAKYGACRYGN 149
Query: 314 TCRFDH 319
C F H
Sbjct: 150 RCCFKH 155
>gi|146413825|ref|XP_001482883.1| hypothetical protein PGUG_04838 [Meyerozyma guilliermondii ATCC
6260]
Length = 156
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C YM G C YG C+F H E + Q + P S+P C N++ YG C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAHGTEELKQVSR----PPKWRSKP----CVNWAKYGACRYGN 149
Query: 314 TCRFDH 319
C F H
Sbjct: 150 RCCFKH 155
>gi|159477867|ref|XP_001697030.1| hypothetical protein CHLREDRAFT_192634 [Chlamydomonas reinhardtii]
gi|158274942|gb|EDP00722.1| predicted protein [Chlamydomonas reinhardtii]
Length = 272
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
P R +PDC +YLK G C +G TCKY+HP+ G
Sbjct: 97 PVRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGG 130
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP R EPDC Y + G C +G C++NHP
Sbjct: 96 YPVRAEEPDCAHYLKKGWCAFGPTCKYNHP 125
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 278 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPLS 336
++ SA + P+G P R + C++Y G C FGPTC+++HP G +YGL PP +
Sbjct: 83 LSLSAPNPPPPVGYPVRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGGLSSYGLGQPPTA 142
Query: 337 ILD 339
+
Sbjct: 143 YVS 145
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 275
P R ++PDC +Y+ G C +G CK++HP+
Sbjct: 97 PVRAEEPDCAHYLKKGWCAFGPTCKYNHPE 126
>gi|294901008|ref|XP_002777208.1| hypothetical protein Pmar_PMAR007113 [Perkinsus marinus ATCC 50983]
gi|239884700|gb|EER09024.1| hypothetical protein Pmar_PMAR007113 [Perkinsus marinus ATCC 50983]
Length = 433
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 41 ASPYPARPGEPD-CLFYRRTGLCGYGSNCRFNH---PAYAAQGAQYREELPERNGQPDCG 96
A A P +P C +RR G C +G C+F H P + + R + +P C
Sbjct: 27 AEKKAAAPRKPRVCRDWRRNGKCRFGDKCKFAHIDSPEKKTEDDKKR--AAKEKERPVCR 84
Query: 97 YYLKTGTCKYGSTCKYHHPK 116
YY C++G C+Y H +
Sbjct: 85 YYAAGKNCRFGERCRYRHER 104
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G C++G CKF H ++ RP +C Y+ C+FG
Sbjct: 40 CRDWRRNGKCRFGDKCKFAHIDSPEKKTEDDKKRAAKEKERP---VCRYYAAGKNCRFGE 96
Query: 314 TCRFDH 319
CR+ H
Sbjct: 97 RCRYRH 102
>gi|302842550|ref|XP_002952818.1| hypothetical protein VOLCADRAFT_93596 [Volvox carteri f.
nagariensis]
gi|300261858|gb|EFJ46068.1| hypothetical protein VOLCADRAFT_93596 [Volvox carteri f.
nagariensis]
Length = 1316
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
+ +S LP RP+ +C YYM GTC YG CK++HP
Sbjct: 826 AGTSDALPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
+ LP R +C YY++ GTC YG +CKY+HP
Sbjct: 830 DALPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RP +C +Y R G CGYG +C++NHP
Sbjct: 832 LPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
>gi|149239799|ref|XP_001525775.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449898|gb|EDK44154.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG C YG C+F H ++ + P S+P C+N++ YG C++G
Sbjct: 445 CAPFMKTGVCTYGTKCQFAHGEQELKHVER----PPKWRSKP----CTNWAKYGSCRYGN 496
Query: 314 TCRFDH 319
C F H
Sbjct: 497 RCCFKH 502
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C YG+ C+F A+ Q ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 445 CAPFMKTGVCTYGTKCQF---AHGEQELKHVERPPKWRSKP-CTNWAKYGSCRYGNRCCF 500
Query: 113 HH 114
H
Sbjct: 501 KH 502
>gi|229596656|ref|XP_001007937.3| zinc finger protein [Tetrahymena thermophila]
gi|225565181|gb|EAR87692.3| zinc finger protein [Tetrahymena thermophila SB210]
Length = 309
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 239 SASSQNLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 296
+AS+ +PE C+ ++ G C YG CKF H K + Q A+N
Sbjct: 167 AASTNVIPEEAKYKTEMCKNWVENGKCNYGDKCKFAHGKNELVQKVAAN-------KHFK 219
Query: 297 QAICSNYSMYGICKFGPTCRFDH 319
C Y +C +GP C F H
Sbjct: 220 TKKCKQYYESCVCNYGPRCHFVH 242
>gi|328877006|gb|EGG25369.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 699
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 248 RPDQPD----CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 303
R D P C+ + +GTC YG CK+ H + + +IG C +
Sbjct: 121 REDVPKELRLCQLNLRSGTCTYGDSCKYSHDLVKYMELKPKSIGDK----------CIFF 170
Query: 304 SMYGICKFGPTCRF 317
YG CK+G TCRF
Sbjct: 171 DTYGFCKYGITCRF 184
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C R+G C YG +C+++H +Y E P+ G C ++ G CKYG TC++
Sbjct: 131 CQLNLRSGTCTYGDSCKYSHDL-----VKYMELKPKSIGDK-CIFFDTYGFCKYGITCRF 184
>gi|294874524|ref|XP_002766999.1| hypothetical protein Pmar_PMAR010979 [Perkinsus marinus ATCC 50983]
gi|239868374|gb|EEQ99716.1| hypothetical protein Pmar_PMAR010979 [Perkinsus marinus ATCC 50983]
Length = 463
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 53 CLFYRRTGLCGYGSNCRFNH---PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGST 109
C +RR+G C +G C+F H P + + R + +P C YY C++G
Sbjct: 40 CRDWRRSGKCRFGDKCKFAHIDSPEKKIEDDKKR--AAKEKERPVCRYYAAGKNCRFGER 97
Query: 110 CKYHHPK 116
C+Y H +
Sbjct: 98 CRYRHER 104
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHH---PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
CR + +G C++G CKF H P+++I P +C Y+ C+
Sbjct: 40 CRDWRRSGKCRFGDKCKFAHIDSPEKKIEDDKKRAAKEKERP------VCRYYAAGKNCR 93
Query: 311 FGPTCRFDH 319
FG CR+ H
Sbjct: 94 FGERCRYRH 102
>gi|363751853|ref|XP_003646143.1| hypothetical protein Ecym_4262 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889778|gb|AET39326.1| hypothetical protein Ecym_4262 [Eremothecium cymbalariae
DBVPG#7215]
Length = 294
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 155 LQYAGSLPTWSLQRAPYLSSR---LQGTQSYMPLIVS----PSQGIVPAPGWNTYM---- 203
++ G +P W LQR + G++S + + ++ P+ G +P N M
Sbjct: 70 VKVGGGVPGW-LQRCGGFGEEQGGVVGSESSLEVEINSQYRPANGTLPLTTENLAMLQHP 128
Query: 204 GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ-----PDCRYYM 258
G +AG + ++ G+ G A++ Q E+ ++ C +
Sbjct: 129 VREGEKESVVVAGVQQRHVTQEDGE-GRAAELDEQQQQQQQPQEKVNKTLYKTELCESFA 187
Query: 259 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 318
TG CKY C+F H + SN ++P C N+S G C++G C F
Sbjct: 188 TTGFCKYATKCQFAHGLHELKFKERSN----KFRTKP----CINWSTTGYCRYGKRCCFK 239
Query: 319 H 319
H
Sbjct: 240 H 240
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C Y + C+F H + + ++E + +P C + TG C+YG C +
Sbjct: 183 CESFATTGFCKYATKCQFAHGLHELK---FKERSNKFRTKP-CINWSTTGYCRYGKRCCF 238
Query: 113 HHPKDRN-----GAGPVSFNILG 130
H D++ AG + N G
Sbjct: 239 KHGNDQDIEVYLKAGLIKMNADG 261
>gi|168005493|ref|XP_001755445.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693573|gb|EDQ79925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL 291
LP+ +P C +++ TGTC+YG++C+F HP + A SA G L
Sbjct: 49 LPQDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPFGRFRL 95
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD---RNGAGPVSFNILGL 131
LP+ +P C ++L+TGTC+YGS C++ HP + GP LGL
Sbjct: 49 LPQDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPFGRFRLGL 97
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
Query: 2 PDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
P +R+ +A+Q A W D + G P P C F+ RTG
Sbjct: 19 PASRKRHLQGIAHQRAKKQ----WFDSFRDQESG--------LPQDAKRPPCTFFLRTGT 66
Query: 62 CGYGSNCRFNHPA 74
C YGS CRF HP
Sbjct: 67 CQYGSECRFEHPV 79
>gi|448111297|ref|XP_004201809.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
gi|359464798|emb|CCE88503.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +TG+C YGS C+F H ++ + P +P C + K GTC+YGS C +
Sbjct: 275 CASYVKTGVCPYGSKCQFAH---GESELKHVDRPPNWRSKP-CANWSKFGTCRYGSRCCF 330
Query: 113 HH 114
H
Sbjct: 331 KH 332
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C Y+ TG C YG+ C+F H + + P S+P C+N+S +G C++G
Sbjct: 275 CASYVKTGVCPYGSKCQFAHGESELKHVDR----PPNWRSKP----CANWSKFGTCRYGS 326
Query: 314 TCRFDH 319
C F H
Sbjct: 327 RCCFKH 332
>gi|347840056|emb|CCD54628.1| hypothetical protein [Botryotinia fuckeliana]
Length = 398
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTG 102
PYP + +FY G C +G +CRF HPA + E PE +P C +L
Sbjct: 28 PYPCK----HFVFY---GECKWGLDCRFGHPA------RIHAENPEPT-RPACKNFLSRR 73
Query: 103 TCKYGSTCKYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
C+YG C HHP GA + L LP Q + P ++
Sbjct: 74 GCQYGWKCHSHHPVATEKGASSAT---LALPTSQFTMATPGILKAA 116
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C++++ G CK+G DC+F HP A++ P+RP C N+ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE--------PTRPA---CKNFLSRRGCQYGW 79
Query: 314 TCRFDHPYA 322
C HP A
Sbjct: 80 KCHSHHPVA 88
>gi|313235823|emb|CBY19807.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 79/222 (35%), Gaps = 47/222 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ + G C YG C F H + Q + +P C +++ GTC YG C +
Sbjct: 267 CITFHTLGFCPYGVRCNFVHDK--DEHRQAKHSVPSLYKTRLCRTFIERGTCPYGDKCDF 324
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYL 172
H G +S++I P Y + +G+ G +S ++P+
Sbjct: 325 AH-----GTKDLSYDITKHP--------KYRTKLCRSFQDTGICVYGDRCCFSHVQSPH- 370
Query: 173 SSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 231
P SP G P AP M + L+ + + +N+GD
Sbjct: 371 ---------SKPHTPSPQSGATPEAP---PSMTSAELLAQGEDSEATPKQKQKNKGDPET 418
Query: 232 GAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
++ CR + TG C+YGA C F H
Sbjct: 419 AIKI------------------CRRWKYTGKCQYGAACIFSH 442
>gi|268567848|ref|XP_002647887.1| Hypothetical protein CBG23753 [Caenorhabditis briggsae]
gi|52548266|gb|AAU82117.1| POS-1 [Caenorhabditis briggsae]
Length = 271
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R+
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRSQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQN----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 28/103 (27%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y + TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRSQTCSYGEQCRFAH-----------GVHELRLPQNPRGRNHPKYKTVLCDKFST 154
Query: 306 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 348
G CK+G C+F H P L +S ++N+ A+
Sbjct: 155 TGNCKYGTRCQFIHKIVN---------PTLLAQESGILNNTAV 188
>gi|50307627|ref|XP_453793.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642927|emb|CAH00889.1| KLLA0D16610p [Kluyveromyces lactis]
Length = 310
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + GTCKYG C+F H + SN ++P C N+ YG C++G
Sbjct: 214 CESFATKGTCKYGNKCQFAHGLHELKIKERSN----NFRTKP----CVNWQKYGYCRYGK 265
Query: 314 TCRFDH 319
C F H
Sbjct: 266 RCCFKH 271
>gi|341885390|gb|EGT41325.1| CBN-MEX-1 protein [Caenorhabditis brenneri]
Length = 501
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 305
C + G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 161 CDAFKRNGSCPYGESCRFAHGE-----------NELRMPSQPRGKAHPKYKTQLCDKFST 209
Query: 306 YGICKFGPTCRFDHPY-AGYPI 326
YG C +GP C+F H G P+
Sbjct: 210 YGQCPYGPRCQFIHKLKKGLPL 231
>gi|307111265|gb|EFN59500.1| expressed protein [Chlorella variabilis]
Length = 594
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 23/77 (29%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+ +TG C YG +C+F HP ++ P+ + C +G TCK+
Sbjct: 389 CAFFLKTGTCAYGDSCKFAHP---------FDKAPKVD-------------CAFGHTCKF 426
Query: 113 HHPKDRNGAGPVSFNIL 129
HHP+ G GP + +
Sbjct: 427 HHPELPPG-GPTAVPAM 442
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 26/67 (38%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +++ TGTC YG CKF HP ++ + C FG
Sbjct: 389 CAFFLKTGTCAYGDSCKFAHPFDKAPKV--------------------------DCAFGH 422
Query: 314 TCRFDHP 320
TC+F HP
Sbjct: 423 TCKFHHP 429
>gi|384485557|gb|EIE77737.1| hypothetical protein RO3G_02441 [Rhizopus delemar RA 99-880]
Length = 434
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ G C+YG+ C++ H ++ I + +R IC +Y + G C +G
Sbjct: 283 CRNWIELGVCRYGSKCRYAHGEQEIR--------TITRHARYKTEICRDYHLDGTCPYGT 334
Query: 314 TCRFDHPYAGYPI 326
C F H A PI
Sbjct: 335 RCTFIH--ASEPI 345
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH----PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + G+C YGS CR+ H + A+Y+ E+ C Y GTC YG+
Sbjct: 283 CRNWIELGVCRYGSKCRYAHGEQEIRTITRHARYKTEI--------CRDYHLDGTCPYGT 334
Query: 109 TCKYHHPKD 117
C + H +
Sbjct: 335 RCTFIHASE 343
>gi|358054521|dbj|GAA99447.1| hypothetical protein E5Q_06146 [Mixia osmundae IAM 14324]
Length = 562
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C FYR G C G C F+H L E +P C YY+K TCK+G C
Sbjct: 81 CRFYR-AGACSAGDKCSFSH------------SLVESGTKPICQYYIKGDTCKFGHKCAN 127
Query: 113 HHPK 116
H K
Sbjct: 128 LHIK 131
>gi|308502528|ref|XP_003113448.1| CRE-MEX-1 protein [Caenorhabditis remanei]
gi|308263407|gb|EFP07360.1| CRE-MEX-1 protein [Caenorhabditis remanei]
Length = 518
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 305
C Y G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 169 CDAYKRNGSCPYGEACRFAHGE-----------NELRMPSQPRGKAHPKYKTQLCDKFST 217
Query: 306 YGICKFGPTCRFDHPY-AGYPI 326
YG C +GP C+F H G P+
Sbjct: 218 YGQCPYGPRCQFIHKLKKGLPL 239
>gi|313222163|emb|CBY39153.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 79/222 (35%), Gaps = 47/222 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ + G C YG C F H + Q + +P C +++ GTC YG C +
Sbjct: 267 CITFHTLGFCPYGVRCNFVHDK--DEHRQAKHSVPSLYKTRLCRTFIERGTCPYGDKCDF 324
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYL 172
H G +S++I P Y + +G+ G +S ++P+
Sbjct: 325 AH-----GTKDLSYDITKHP--------KYRTKLCRSFQDTGICVYGDRCCFSHVQSPH- 370
Query: 173 SSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 231
P +P G P AP M + L+ + + +N+GD
Sbjct: 371 ---------SKPHTPTPQSGATPEAP---PSMTSAELLAQGEDSEATPKQKQKNKGDPET 418
Query: 232 GAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 273
++ CR + TG C+YGA C F H
Sbjct: 419 AIKI------------------CRRWKYTGKCQYGAACIFSH 442
>gi|255725390|ref|XP_002547624.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135515|gb|EER35069.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 254
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG C YG+ C+F H + + P S+P C+N+S YG C++G
Sbjct: 195 CASFMKTGVCPYGSKCQFAHGENELKHVDR----PPKWRSKP----CANWSKYGSCRYGN 246
Query: 314 TCRFDH 319
C F H
Sbjct: 247 RCCFKH 252
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C YGS C+F A+ ++ + P+ +P C + K G+C+YG+ C +
Sbjct: 195 CASFMKTGVCPYGSKCQF---AHGENELKHVDRPPKWRSKP-CANWSKYGSCRYGNRCCF 250
Query: 113 HH 114
H
Sbjct: 251 KH 252
>gi|403338887|gb|EJY68686.1| Protein CPSF-4 [Oxytricha trifallax]
Length = 373
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSA------ASNIGPLGLPSRPGQAICSNY 303
P CRY++ G C G C F H P+E+ + +G + + IC NY
Sbjct: 59 PPCRYFIQDGVCSKGDKCVFRHVIPQEKRTEDCPYYERGFCRMGLFCTFNHIHKKICENY 118
Query: 304 SMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL--DSSLMNHQAISATHSIETSP 358
MYG C GP C +H + N +L L+ + + + A+ ATH + P
Sbjct: 119 -MYGFCPKGPDCEKEHIKSVIADN-DTTLKILANFPDNENWADKSALQATHQQQQQP 173
>gi|432892293|ref|XP_004075749.1| PREDICTED: uncharacterized protein LOC101175179 [Oryzias latipes]
Length = 412
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNY 303
P R CR + TG+CKYG+ C+F H + + GL P C +
Sbjct: 145 PNRYKTELCRGFQETGSCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTF 194
Query: 304 SMYGICKFGPTCRFDH--PYAGYPIN 327
+G C +GP C F H AG P++
Sbjct: 195 YNFGYCPYGPRCHFIHEEKIAGAPLS 220
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 39 AQASPY--PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCG 96
AQ P P R C ++ TG C YGS C+F H +G YR P+ +P C
Sbjct: 137 AQVQPMLSPNRYKTELCRGFQETGSCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CR 192
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGA 121
+ G C YG C + H + GA
Sbjct: 193 TFYNFGYCPYGPRCHFIHEEKIAGA 217
>gi|307106713|gb|EFN54958.1| hypothetical protein CHLNCDRAFT_134725 [Chlorella variabilis]
Length = 325
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
DC F+ R G CG GS C F H G +R++ GQ DC ++L+ G C GS C
Sbjct: 8 DCQFFLR-GSCGKGSLCPFRHDPSKITG--FRQQ----QGQQDCLFFLQ-GRCTKGSLCP 59
Query: 112 YHH 114
Y H
Sbjct: 60 YRH 62
>gi|453087467|gb|EMF15508.1| hypothetical protein SEPMUDRAFT_123789 [Mycosphaerella populorum
SO2202]
Length = 1206
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 254 CRYYMNTGTCKYGA-DCKFHHPKERIAQSAASNIG-----PLGLPS-----RPGQAICSN 302
CR++ GTCK+ A +C F H A A+ IG L LP PGQ C
Sbjct: 471 CRFWRE-GTCKHSAQNCSFAH---SFAAGDATKIGGEYASKLRLPPPDERYDPGQLRCHF 526
Query: 303 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASS 362
+ +GICK G C++ H Y PP + + Q + A ++ P +
Sbjct: 527 FRTHGICKRGAVCKYAHHDTPY------DAPPPGVTVEDVRASQLVYAQSTMSRDPQKTR 580
Query: 363 KIPN 366
K P+
Sbjct: 581 KRPD 584
>gi|5869806|emb|CAA76889.2| zinc finger protein [Danio rerio]
Length = 308
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS- 293
+H L P R + P CR + G C +G C F H + A PS
Sbjct: 110 VHNLKEQRPIRPRRRNVP-CRTFRAFGVCPFGTRCHFLHVEGGSESDGAEEEQTWQPPSQ 168
Query: 294 ----RPGQAICSNYSMYGICKFGPTCRFDH 319
+P A+C +S +G C +G CRF H
Sbjct: 169 SQEWKPRGALCRTFSAFGFCLYGTRCRFQH 198
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 54 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 102
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 103 YGTRCLFVH 111
>gi|292623933|ref|XP_002665468.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Danio
rerio]
Length = 361
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 298
++SS + R CR + +GTCKYGA C+F H E + GL P
Sbjct: 133 TSSSAPMSTRYKTELCRTFEESGTCKYGAKCQFAHGMEELR----------GLNRHPKYK 182
Query: 299 I--CSNYSMYGICKFGPTCRFDH 319
C + G C +G C F H
Sbjct: 183 TEPCRTFHTIGFCPYGARCHFIH 205
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+ ++P R C + +G C YG+ C+F H +G P+ +P C
Sbjct: 133 TSSSAPMSTRYKTELCRTFEESGTCKYGAKCQFAHGMEELRGLNRH---PKYKTEP-CRT 188
Query: 98 YLKTGTCKYGSTCKYHH 114
+ G C YG+ C + H
Sbjct: 189 FHTIGFCPYGARCHFIH 205
>gi|350423562|ref|XP_003493520.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Bombus impatiens]
Length = 420
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N G C+ G +C++ H + I PS IC + +GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGVWNDGNNETIISSSAPSMNN--IC-RFFKHGICKFGN 66
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 369
C F H + N + S+ +SS H + IS + +I+ + D WV+
Sbjct: 67 HCYFRHTTESFDNNV---VNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEWVK 120
>gi|308801741|ref|XP_003078184.1| CCCH-type Zn-finger protein (ISS) [Ostreococcus tauri]
gi|116056635|emb|CAL52924.1| CCCH-type Zn-finger protein (ISS) [Ostreococcus tauri]
Length = 276
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTC+YG+ C+F H ++ + P+ + +C ++ G C +G
Sbjct: 113 CRSWEESGTCRYGSKCQFAHGRD--------ELRPVLRHPKYKTEVCRTFAAQGSCPYGS 164
Query: 314 TCRFDH 319
CRF H
Sbjct: 165 RCRFIH 170
>gi|241733215|ref|XP_002412317.1| hypothetical protein IscW_ISCW021372 [Ixodes scapularis]
gi|215505564|gb|EEC15058.1| hypothetical protein IscW_ISCW021372 [Ixodes scapularis]
Length = 382
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS-------AASNIGPLGLPS--RPGQAI 299
P QP CR++ N G C+Y C++ H + A ++ PS P + +
Sbjct: 69 PSQP-CRFFANHGHCRYRDRCRYSHGDVGVVSDHLDAETPEAEDVAKQKKPSSGEPTE-V 126
Query: 300 CSNYSMYGICKFGPTCRFDH 319
C Y G C+FG +CRF H
Sbjct: 127 CRFYERTGYCRFGRSCRFVH 146
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE--- 88
+ G G A P++P C F+ G C Y CR++H E PE
Sbjct: 56 TRRGRGKAVPVSTPSQP----CRFFANHGHCRYRDRCRYSHGDVGVVSDHLDAETPEAED 111
Query: 89 -------RNGQPD--CGYYLKTGTCKYGSTCKYHH 114
+G+P C +Y +TG C++G +C++ H
Sbjct: 112 VAKQKKPSSGEPTEVCRFYERTGYCRFGRSCRFVH 146
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
CR+Y TG C++G C+F H + R A +G L +P Q SN
Sbjct: 127 CRFYERTGYCRFGRSCRFVH-RPRSKAKNARRVGKTALNCQPNQVADSN 174
>gi|163915111|ref|NP_001106542.1| ZFP36 ring finger protein [Xenopus (Silurana) tropicalis]
gi|159155749|gb|AAI54919.1| zfp36 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG CKYGA C+F H K + + N P + +C + +YG C +G
Sbjct: 109 CRTFSETGICKYGAKCQFAHGKIELRE---PNRHP-----KYKTELCHKFYLYGECPYGS 160
Query: 314 TCRFDH 319
C F H
Sbjct: 161 RCNFIH 166
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG+C YG+ C+F H + EL E N P C + G C YG
Sbjct: 109 CRTFSETGICKYGAKCQFAHG---------KIELREPNRHPKYKTELCHKFYLYGECPYG 159
Query: 108 STCKY-HHPKDRNGAGPV---SFNILGLPMRQ 135
S C + HHP ++ + V S + G+P ++
Sbjct: 160 SRCNFIHHPSEQGTSQHVLRQSLSYSGVPSKR 191
>gi|224105279|ref|XP_002313752.1| predicted protein [Populus trichocarpa]
gi|222850160|gb|EEE87707.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 26 RLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH--PAYAAQGAQYR 83
+LK QE P A+ G+ + C Y +NCRFNH A+ AQ +
Sbjct: 87 QLKRERQQEKKSSVNLCPELAKTGDVNS--------CPYKNNCRFNHDLEAFKAQKPEDL 138
Query: 84 E-ELPERNGQPDCGYYLKTGTCKYGSTCKY---HHPKD--RNGAGPVSFNILGLPMRQDE 137
E E P NG+ C C YG C++ H +D RNG +S I GL +
Sbjct: 139 EGECPFVNGEGSC--------CPYGLACRFYGTHKGRDGVRNGKKQIS-EINGLNKDVQK 189
Query: 138 ---KSCPYYMRTGSFLPSSGLQYAGSLPTWSL 166
K+ +++ S L S GL PT L
Sbjct: 190 LLWKNKMKFLKADSVLKSLGLTVMNKTPTMLL 221
>gi|307186056|gb|EFN71788.1| Makorin-1 [Camponotus floridanus]
Length = 418
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR-PGQAICSNYSMYGICKFG 312
CRY+ N G C+ G +C++ H + + ++ A+ + P+ PG + + GICKFG
Sbjct: 11 CRYFKN-GACREGNNCRYRHAQ--VNRNDANINETVTTPTNSPGYIVTCRFFKQGICKFG 67
Query: 313 PTCRFDH 319
CRF H
Sbjct: 68 NQCRFSH 74
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 21/126 (16%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY-----YLKTGTCKYGSTC 110
Y + G C G+NCR+ H A E + P GY + K G CK+G+ C
Sbjct: 13 YFKNGACREGNNCRYRHAQVNRNDANINETVTTPTNSP--GYIVTCRFFKQGICKFGNQC 70
Query: 111 KYHHPK-------------DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQY 157
++ H + + +G + N L + D+++ +++ F+P++
Sbjct: 71 RFSHSTGTADNDVTQTNAIENSASGQHTANTLK-NKKADKRTAEDWVKAPEFIPTAVSPV 129
Query: 158 AGSLPT 163
AGS T
Sbjct: 130 AGSSST 135
>gi|5360265|dbj|BAA81905.1| HrZF-1 [Halocynthia roretzi]
Length = 621
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 29/146 (19%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V NI+ I + + ++ EG +P++ C Y G+C YG C F
Sbjct: 431 SVTQSQVINIQRQIGKTPVDEDVEGDSPLH---FPSKYRTEPCTTYHTIGMCPYGEQCNF 487
Query: 71 NHPAYAAQGAQYREELPERNGQPD-----------CGYYLKTGTCKYGSTCKYHHPKDR- 118
H +L E+N P+ C + K G C YG C + H D
Sbjct: 488 YH------------DLKEKNDHPNVTKTSRYKTRLCKTWQKAGECPYGVKCDFAHGTDDL 535
Query: 119 --NGAGPVSFNILGLPMRQDEKSCPY 142
N + + + Q CPY
Sbjct: 536 ILNSSSKPRYKTRMCKVLQQIGRCPY 561
>gi|449679922|ref|XP_004209452.1| PREDICTED: uncharacterized protein LOC101235045 [Hydra
magnipapillata]
Length = 1104
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPA-----------YAAQGAQYREELPERNGQPDCGYYLKT 101
C F+++ G C YG CRF+H Y + + Q C +Y
Sbjct: 942 CPFFKKKGFCDYGDQCRFSHKIEIDKRIELCKFYVVGACRKENNCLFMHEQWPCRFYHVL 1001
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK----SCPYYMRTGSFLPSSGLQY 157
+C GS+CKY H +D F L M + + P +G + +SG
Sbjct: 1002 KSCNKGSSCKYSH-EDMTPEVKKVFEEFELKMEESQSVNNVEAPCSSNSGPYSSNSGTSL 1060
Query: 158 AGSLPTWSLQRAP 170
G ++AP
Sbjct: 1061 TGRHSDDEKEKAP 1073
>gi|341904659|gb|EGT60492.1| hypothetical protein CAEBREN_18470 [Caenorhabditis brenneri]
Length = 265
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q + +ANQ D++ E + R K D+ + C Y+R
Sbjct: 69 QAARSTLANQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 19/74 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 306 YGICKFGPTCRFDH 319
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|341875115|gb|EGT31050.1| hypothetical protein CAEBREN_24850 [Caenorhabditis brenneri]
Length = 265
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q + +ANQ D++ E + R K D+ + C Y+R
Sbjct: 69 QAARSTLANQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 19/77 (24%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 306 YGICKFGPTCRFDHPYA 322
G CK+G C+F H A
Sbjct: 155 TGNCKYGTRCQFIHKLA 171
>gi|448097279|ref|XP_004198630.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
gi|359380052|emb|CCE82293.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
Length = 328
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +TG+C YGS C+F H ++ + P +P C + K G+C+YGS C +
Sbjct: 269 CASYVKTGVCPYGSKCQFAH---GESELKHVDRPPNWRSKP-CANWSKFGSCRYGSRCCF 324
Query: 113 HH 114
H
Sbjct: 325 KH 326
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C Y+ TG C YG+ C+F H + + P S+P C+N+S +G C++G
Sbjct: 269 CASYVKTGVCPYGSKCQFAHGESELKHVDR----PPNWRSKP----CANWSKFGSCRYGS 320
Query: 314 TCRFDH 319
C F H
Sbjct: 321 RCCFKH 326
>gi|260949487|ref|XP_002619040.1| hypothetical protein CLUG_00199 [Clavispora lusitaniae ATCC 42720]
gi|238846612|gb|EEQ36076.1| hypothetical protein CLUG_00199 [Clavispora lusitaniae ATCC 42720]
Length = 235
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C YM G C YGA C+F H + + S P S+P CSN++ YG C++G
Sbjct: 176 CVSYMKMGGCPYGAKCQFAHGEHDLK----SVPRPANYRSKP----CSNWAKYGSCRYGK 227
Query: 314 TCRFDH 319
C F H
Sbjct: 228 RCCFKH 233
>gi|412992223|emb|CCO19936.1| PREDICTED: similar to predicted protein [Bathycoccus prasinos]
Length = 823
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY-AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
C+F+ + G C G+ C+F+H A AA+GA E+ + + P C ++ K G CKYG TCK
Sbjct: 765 CVFFAK-GTCNKGNACKFSHHASSAAEGAG---EVVDTSNVP-CVFFAK-GKCKYGETCK 818
Query: 112 YHH 114
+ H
Sbjct: 819 FSH 821
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 257 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 316
+ GTC G CKF H A+ A + +P C ++ G CK+G TC+
Sbjct: 767 FFAKGTCNKGNACKFSHHASSAAEGAGEVVDTSNVP-------CVFFAK-GKCKYGETCK 818
Query: 317 FDH 319
F H
Sbjct: 819 FSH 821
>gi|302782447|ref|XP_002972997.1| hypothetical protein SELMODRAFT_98008 [Selaginella moellendorffii]
gi|300159598|gb|EFJ26218.1| hypothetical protein SELMODRAFT_98008 [Selaginella moellendorffii]
Length = 878
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 15/69 (21%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
GE C+++RR G C G+ C F+H + C ++L C+YG+
Sbjct: 680 GEVQCVYFRR-GFCAKGNCCEFSHSVSSTPAV--------------CKFFLSGDGCRYGA 724
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 725 HCRYKHDSD 733
>gi|414879023|tpg|DAA56154.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 71
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
G+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 5 GEELCKFYSRYGICKFGANCKFDHPTVVAPMVY 37
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
GE C FY R G+C +G+NC+F+HP A
Sbjct: 5 GEELCKFYSRYGICKFGANCKFDHPTVVA 33
>gi|320581641|gb|EFW95860.1| Member of the CCCH zinc finger family [Ogataea parapolymorpha DL-1]
Length = 423
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTC 110
C ++ G C YG+ C+F H G + +++ N C +LK G+C+YG C
Sbjct: 358 CTQFQEKGSCPYGAKCQFAH------GEEELKKVKRANNWKTKLCANWLKAGSCRYGKRC 411
Query: 111 KYHHPKDRNGA 121
+ H +D G+
Sbjct: 412 CFKHGEDDRGS 422
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G+C YGA C+F H +E + + +N L C+N+ G C++G
Sbjct: 358 CTQFQEKGSCPYGAKCQFAHGEEELKKVKRANNWKTKL--------CANWLKAGSCRYGK 409
Query: 314 TCRFDH 319
C F H
Sbjct: 410 RCCFKH 415
>gi|17544440|ref|NP_503020.1| Protein Y116A8C.20 [Caenorhabditis elegans]
gi|5832788|emb|CAB55126.1| Protein Y116A8C.20 [Caenorhabditis elegans]
Length = 201
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 18 DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
D + E + R+K QEG CL ++R C YG C+F H +
Sbjct: 73 DELREEMKRMK---RQEGAFKTAL-----------CLSHKRGKTCIYGEQCKFAHGVHEL 118
Query: 78 QGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCKY-HHPKD-RNGAGPVSFNILGLPMR 134
+ Q ++ RN + C + TG CKYG C++ H D N P+ L +
Sbjct: 119 RCQQAKKN--HRNYKTVLCDKFTTTGYCKYGIRCQFIHRSMDATNVTRPIDTADFKLDV- 175
Query: 135 QDEKSCPYYMRTGSFLP 151
Q + S + + + SFLP
Sbjct: 176 QSDLSRAFALDSSSFLP 192
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHH-PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
C + TC YG CKF H E Q A N +C ++ G CK+G
Sbjct: 94 CLSHKRGKTCIYGEQCKFAHGVHELRCQQAKKN------HRNYKTVLCDKFTTTGYCKYG 147
Query: 313 PTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNW 367
C+F H ++ P+ D L +S ++ D+SS +PNW
Sbjct: 148 IRCQFIHR----SMDATNVTRPIDTADFKLDVQSDLSRAFAL----DSSSFLPNW 194
>gi|330792528|ref|XP_003284340.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
gi|325085686|gb|EGC39088.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
Length = 442
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG C+YG C+F H K+ + P+ + C + G C +G
Sbjct: 197 CRSFAETGVCRYGLKCQFAHGKDELR--------PVMRHPKYKTEACKTFYSVGSCPYGA 248
Query: 314 TCRFDH 319
CRF H
Sbjct: 249 RCRFIH 254
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG+C YG C+F H + +Y+ E C + G+C YG+
Sbjct: 197 CRSFAETGVCRYGLKCQFAHGKDELRPVMRHPKYKTEA--------CKTFYSVGSCPYGA 248
Query: 109 TCKYHHPKD 117
C++ H +D
Sbjct: 249 RCRFIHTRD 257
>gi|52548270|gb|AAU82119.1| POS-1 [Caenorhabditis remanei]
Length = 261
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKY 112
C YG CRF H + + Q+ P P C + TG CKYG+ C++
Sbjct: 115 CSYGDQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQF 166
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 19/72 (26%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGDQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 306 YGICKFGPTCRF 317
G CK+G C+F
Sbjct: 155 TGNCKYGTRCQF 166
>gi|406607221|emb|CCH41482.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces
ciferrii]
Length = 503
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF----NHPAYAAQGAQYREELPER 89
+GG QA+ C + +TG C YG+ C+F N +G++YR +
Sbjct: 425 QGGLDKQANVNTELYKTELCSTFNKTGSCPYGNKCQFAHGGNELKVVNRGSKYRSK---- 480
Query: 90 NGQPDCGYYLKTGTCKYGSTCKYHH 114
C + KTG+C+YG+ C + H
Sbjct: 481 ----PCANWSKTGSCRYGNRCCFKH 501
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + TG+C YG C+F H + N G S+P C+N+S G C++G
Sbjct: 444 CSTFNKTGSCPYGNKCQFAHGGNEL---KVVNRGS-KYRSKP----CANWSKTGSCRYGN 495
Query: 314 TCRFDH 319
C F H
Sbjct: 496 RCCFKH 501
>gi|168062631|ref|XP_001783282.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665200|gb|EDQ51892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 335
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG C+Y A C+F H + ++ P+ + +C +Y+ G+C +G
Sbjct: 197 CRSWEETGHCRYAAKCQFAHGND--------DLRPVPRHPKYKTELCRSYTETGLCSYGK 248
Query: 314 TCRFDH 319
CRF H
Sbjct: 249 RCRFIH 254
>gi|348676825|gb|EGZ16642.1| hypothetical protein PHYSODRAFT_314356 [Phytophthora sojae]
Length = 494
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ C YG CRF H A + + EE P++ C ++ CKYG C +
Sbjct: 175 CKYFGTAMGCKYGDECRFTHDEAAVKAVEGGEEPPKKKVDIPCRFFNTPLGCKYGDDCSF 234
Query: 113 HHPK 116
H K
Sbjct: 235 IHEK 238
>gi|146165384|ref|XP_001014899.2| hypothetical protein TTHERM_00052030 [Tetrahymena thermophila]
gi|146145562|gb|EAR94717.2| hypothetical protein TTHERM_00052030 [Tetrahymena thermophila
SB210]
Length = 212
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+Y+ NTG C + C F H + + LP+ C N+ G C +G
Sbjct: 71 CKYWKNTGHCHFSDSCAFAHGYHEVREKTH-------LPNNYRTKKCKNFHEIGFCLYGE 123
Query: 314 TCRFDHPYAGYPINYG 329
C+F H P N+
Sbjct: 124 RCQFLHTVHKKPNNFA 139
>gi|224073744|ref|XP_002304152.1| predicted protein [Populus trichocarpa]
gi|222841584|gb|EEE79131.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 20/126 (15%)
Query: 250 DQPDCRYYMNTGTCKYGADCKFHHP-----KERIAQ---SAASNIGPLGLPSRPGQA--- 298
D+ CR + + C YG C+F H ++ + Q S+A +IG G S G
Sbjct: 100 DKNLCRMFNSGKGCTYGNKCRFLHVVPENFQKNLGQNWESSAISIGTTGTASSGGHKKGY 159
Query: 299 ----ICSNYSMYGICKFGPTCRFDH-----PYAGYPINYGLSLPPLSILDSSLMNHQAIS 349
+C+N+ M G C +G C F H + I + P +S LM I
Sbjct: 160 KKTRLCNNWEMTGGCPYGKVCHFAHGQQELEKSDGSIALASGIVPTKASNSLLMGKDGIG 219
Query: 350 ATHSIE 355
+ H E
Sbjct: 220 SNHKHE 225
>gi|349802739|gb|AEQ16842.1| hypothetical protein [Pipa carvalhoi]
Length = 174
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TGTCKYGA C+F H K + + N P + +C Y +YG C +G
Sbjct: 112 CRTFSETGTCKYGAKCQFAHGKTELRE---PNRHP-----KYKTELCHKY-LYGECPYGT 162
Query: 314 TCRFDH 319
C F H
Sbjct: 163 RCNFIH 168
>gi|167386244|ref|XP_001737682.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899452|gb|EDR26041.1| hypothetical protein EDI_014210 [Entamoeba dispar SAW760]
Length = 222
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNH-------PAYAAQGAQYREELPERNGQPDCGYYLKT 101
G C+F+ + G C G +C F+H P++ Q ++ + + C Y+ +T
Sbjct: 137 GTKPCIFFMQNGYCKKGGSCTFSHDISSLNNPSFCQQNSKQFISVDKLYRTKPCKYFFET 196
Query: 102 GTCKYGSTCKYHH 114
G C+ G C + H
Sbjct: 197 GVCRKGEHCNFSH 209
>gi|302805206|ref|XP_002984354.1| hypothetical protein SELMODRAFT_40615 [Selaginella moellendorffii]
gi|300147742|gb|EFJ14404.1| hypothetical protein SELMODRAFT_40615 [Selaginella moellendorffii]
Length = 913
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G+ C+++RR G C G+ C F+H + P C ++L C+YG+
Sbjct: 676 GKVQCVYFRR-GSCAKGNGCEFSHSV---------------SSTPVCKFFLSGDGCRYGA 719
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 720 HCRYKHDSD 728
>gi|395334665|gb|EJF67041.1| hypothetical protein DICSQDRAFT_96073 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 118 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYNRGFCRLGPNCPRKHVRRVACQLYLTG 177
Query: 308 ICKFGPTCRFDHPYAGYP 325
C GP C HP G P
Sbjct: 178 FCPLGPDCPRGHPKPGIP 195
>gi|393910345|gb|EJD75831.1| hypothetical protein LOAG_17084 [Loa loa]
Length = 411
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN---GQPDC 95
A+ SP P C + +G+C + NCRF A+ + + LP +N C
Sbjct: 148 ARKSPKPDSYKTVMCQAWLESGICSFAENCRF---AHGDEELRPCNRLPTKNPKYKTKLC 204
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
Y G C YG C + HP N + P
Sbjct: 205 DKYTMAGLCPYGDRCLFIHPGVSNASNP 232
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ +G C + +C+F H E + N P P + +C Y+M G+C +G
Sbjct: 162 CQAWLESGICSFAENCRFAHGDEELR---PCNRLPTKNPKYKTK-LCDKYTMAGLCPYGD 217
Query: 314 TCRFDHP 320
C F HP
Sbjct: 218 RCLFIHP 224
>gi|392571211|gb|EIW64383.1| hypothetical protein TRAVEDRAFT_158581 [Trametes versicolor
FP-101664 SS1]
Length = 280
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 117 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPTCPRKHVRRVACQLYLTG 176
Query: 308 ICKFGPTCRFDHPYAGYP 325
C GP C HP G P
Sbjct: 177 FCPLGPDCPRGHPKPGIP 194
>gi|383851850|ref|XP_003701444.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Megachile rotundata]
Length = 417
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N G C+ G++C++ H +E I +N + S P + + +G+CKFG
Sbjct: 11 CRYFKN-GICREGSNCRYRHTQE-IGNDGNTN--ETVISSVPSFSSVCRFFKHGVCKFGN 66
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPD--ASSKIPNWVQNS 371
C F H P + D++L+N ++ + S + + + AS+ I N +N+
Sbjct: 67 QCHFRHN------------PEID--DNNLVNANSVENSSSGQQTSNTSASTTIKNVKENA 112
Query: 372 DAVSVQHQNPDM 383
A + P+
Sbjct: 113 HAAEEWVKAPEF 124
>gi|18858483|ref|NP_571014.1| cth1 [Danio rerio]
gi|5911474|emb|CAB55775.1| putative zinc finger protein [Danio rerio]
gi|79158856|gb|AAI07985.1| Cth1 [Danio rerio]
Length = 319
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 235 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS- 293
+H L P R + P CR + G C +G C F H + A PS
Sbjct: 121 VHNLKEQRPIRPRRRNVP-CRTFRAFGVCPFGNRCHFLHVEGGSESDGAEEEQTWQPPSQ 179
Query: 294 ----RPGQAICSNYSMYGICKFGPTCRFDH 319
+P A+C +S +G C +G CRF H
Sbjct: 180 SQEWKPRGALCRTFSAFGFCLYGTRCRFQH 209
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 65 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 113
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 114 YGTRCLFVH 122
>gi|392576362|gb|EIW69493.1| hypothetical protein TREMEDRAFT_68721 [Tremella mesenterica DSM
1558]
Length = 346
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSM 305
P C +++ G C+ G +C ++HP++R + N +GP + IC Y M
Sbjct: 127 MPVCVWFVMAGKCELGGECLYYHPRDRRVECPDYNRGFCRLGPECPRRHIRRQICGAY-M 185
Query: 306 YGICKFGPTCRFDHP 320
G C GP C+ HP
Sbjct: 186 AGFCPDGPNCKLAHP 200
>gi|312084674|ref|XP_003144371.1| see oma family member [Loa loa]
Length = 341
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN---GQPDC 95
A+ SP P C + +G+C + NCRF H + + LP +N C
Sbjct: 78 ARKSPKPDSYKTVMCQAWLESGICSFAENCRFAH---GDEELRPCNRLPTKNPKYKTKLC 134
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
Y G C YG C + HP N + P
Sbjct: 135 DKYTMAGLCPYGDRCLFIHPGVSNASNP 162
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ +G C + +C+F H E + N P P + +C Y+M G+C +G
Sbjct: 92 CQAWLESGICSFAENCRFAHGDEELR---PCNRLPTKNPKYKTK-LCDKYTMAGLCPYGD 147
Query: 314 TCRFDHP 320
C F HP
Sbjct: 148 RCLFIHP 154
>gi|324518763|gb|ADY47198.1| Tristetraprolin, partial [Ascaris suum]
Length = 381
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +TG C YGA+C+F H + + + P P Q +C+ + G C +G
Sbjct: 167 CREFRDTGGCGYGAECRFAHGESEL------RLPPQAHPKYKTQ-LCNKFVWLGRCPYGS 219
Query: 314 TCRFDH 319
C+F H
Sbjct: 220 RCQFIH 225
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQ-----GAQYREELPERNGQPDCGYYLKTGTCKYG 107
C +R TG CGYG+ CRF H + +Y+ +L C ++ G C YG
Sbjct: 167 CREFRDTGGCGYGAECRFAHGESELRLPPQAHPKYKTQL--------CNKFVWLGRCPYG 218
Query: 108 STCKYHHPKDRNGAGPVSFNILGLPMRQDEKS 139
S C++ H + N L M+QD +S
Sbjct: 219 SRCQFIHRRP---------NELISDMQQDNRS 241
>gi|281206643|gb|EFA80829.1| hypothetical protein PPL_06417 [Polysphondylium pallidum PN500]
Length = 388
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG C+YG C+F H ++ + P+ + C + G C +G
Sbjct: 158 CRSFAETGICRYGFKCQFAHGRDELR--------PVMRHPKYKTETCKTFHTVGSCPYGS 209
Query: 314 TCRFDH 319
CRF H
Sbjct: 210 RCRFIH 215
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
D G + + +R C + TG+C YG C+F H R+EL
Sbjct: 136 DGSSNGDIEEEINGQSRYKTELCRSFAETGICRYGFKCQFAHG---------RDELRPVM 186
Query: 91 GQPD-----CGYYLKTGTCKYGSTCKYHHPK 116
P C + G+C YGS C++ H K
Sbjct: 187 RHPKYKTETCKTFHTVGSCPYGSRCRFIHSK 217
>gi|291238825|ref|XP_002739326.1| PREDICTED: Smad-interacting and CPSF-like protein-like
[Saccoglossus kowalevskii]
Length = 858
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+FY R G C G+ C + H P++ C +L+ GTCK G++C++
Sbjct: 629 CMFYNRFGKCNRGNKCPYIHD-------------PDKVAV--CTRFLR-GTCKDGASCQF 672
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPY 142
H ++ SF + G+ R D CPY
Sbjct: 673 SHKVSKDKMPVCSFFLRGVCNRDD---CPY 699
>gi|350422621|ref|XP_003493231.1| PREDICTED: hypothetical protein LOC100743445 [Bombus impatiens]
Length = 351
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 86 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 137
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 138 RCHFIHNF 145
>gi|291240057|ref|XP_002739937.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 367
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 311
CR + GTCKYG C+F H + GL P +C + G C +
Sbjct: 118 CRPFEENGTCKYGDKCQFAHGDHELR----------GLSRHPKYKTELCRTFHTIGFCPY 167
Query: 312 GPTCRFDH 319
GP C F H
Sbjct: 168 GPRCHFIH 175
>gi|291240055|ref|XP_002739936.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 355
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 311
CR + GTCKYG C+F H + GL P +C + G C +
Sbjct: 106 CRPFEENGTCKYGDKCQFAHGDHELR----------GLSRHPKYKTELCRTFHTIGFCPY 155
Query: 312 GPTCRFDH 319
GP C F H
Sbjct: 156 GPRCHFIH 163
>gi|110762396|ref|XP_001121248.1| PREDICTED: hypothetical protein LOC725393 [Apis mellifera]
Length = 401
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 85 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 136
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 137 RCHFIHNF 144
>gi|17533629|ref|NP_496795.1| Protein MOE-3 [Caenorhabditis elegans]
gi|3876591|emb|CAB04229.1| Protein MOE-3 [Caenorhabditis elegans]
Length = 367
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA----ICSNYSMYGIC 309
C+ ++ + TC + +C+F H +E + P L SR +C Y+ G+C
Sbjct: 136 CQAWLESKTCTFAENCRFAHGEEELR--------PAKLESRQNNKYKTKLCDKYTTTGLC 187
Query: 310 KFGPTCRFDHP 320
+G C F HP
Sbjct: 188 PYGKRCLFIHP 198
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + C + NCRF H + A+ + C Y TG C YG C +
Sbjct: 136 CQAWLESKTCTFAENCRFAHGEEELRPAKLESRQNNKYKTKLCDKYTTTGLCPYGKRCLF 195
Query: 113 HHPKDRNGA 121
HP ++ A
Sbjct: 196 IHPDNQPNA 204
>gi|118400634|ref|XP_001032639.1| 50S ribosomal protein [Tetrahymena thermophila]
gi|89286982|gb|EAR84976.1| 50S ribosomal protein [Tetrahymena thermophila SB210]
Length = 1347
Score = 44.3 bits (103), Expect = 0.12, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRYY+ G C G +CKF H K+ +RP + +C N+ G CK G
Sbjct: 103 CRYYLQ-GNCTKGDECKFLHQKD-------------DGEARP-KKVCYNFQNTGFCKMGD 147
Query: 314 TCRFDH 319
C+F H
Sbjct: 148 RCKFSH 153
Score = 39.7 bits (91), Expect = 2.5, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 24/112 (21%)
Query: 13 ANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPD----------CLFYRRTGLC 62
ANQ A N E+ I DNQ G Q + + G+ D C +Y + G C
Sbjct: 56 ANQEAPNKEDRFGERSIQDNQRG---QQQNQHNEDRGQDDEFKDNEKTKICRYYLQ-GNC 111
Query: 63 GYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
G C+F H +++ E + C + TG CK G CK+ H
Sbjct: 112 TKGDECKFLH----------QKDDGEARPKKVCYNFQNTGFCKMGDRCKFSH 153
>gi|354548255|emb|CCE44992.1| hypothetical protein CPAR2_407950 [Candida parapsilosis]
Length = 265
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG+C YG C+F H + + + P + C+N+S YG C++G
Sbjct: 206 CGPFMKTGSCPYGLKCQFAH--------GEAELKHIERPPKWRSKPCANWSKYGSCRYGN 257
Query: 314 TCRFDH 319
C F H
Sbjct: 258 RCCFKH 263
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ +TG C YG C+F A+ ++ E P+ +P C + K G+C+YG+ C + H
Sbjct: 209 FMKTGSCPYGLKCQF---AHGEAELKHIERPPKWRSKP-CANWSKYGSCRYGNRCCFKH 263
>gi|340723738|ref|XP_003400246.1| PREDICTED: hypothetical protein LOC100651220 [Bombus terrestris]
Length = 397
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 86 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 137
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 138 RCHFIHNF 145
>gi|17540276|ref|NP_502931.1| Protein CCCH-2 [Caenorhabditis elegans]
gi|3876905|emb|CAB05191.1| Protein CCCH-2 [Caenorhabditis elegans]
Length = 186
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + T C YG CKF H E + Q N G + P + +C N+S G CK+G
Sbjct: 78 CKTFQLTRACSYGEQCKFAHSVEEL-QLKQKNRG-VNHP-KYKTVLCDNFSRTGHCKYGT 134
Query: 314 TCRFDH 319
C+F H
Sbjct: 135 KCQFIH 140
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 18 DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
D++ E + RLK +N + C ++ T C YG C+F H
Sbjct: 57 DDLHEEMMRLKRKENAFKTAL--------------CKTFQLTRACSYGEQCKFAHSVEEL 102
Query: 78 QGAQYREELPE-RNGQPDCGYYLKTGTCKYGSTCKYHH 114
Q Q + + C + +TG CKYG+ C++ H
Sbjct: 103 QLKQKNRGVNHPKYKTVLCDNFSRTGHCKYGTKCQFIH 140
>gi|383857861|ref|XP_003704422.1| PREDICTED: uncharacterized protein LOC100877850 [Megachile
rotundata]
Length = 380
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 96 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 147
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 148 RCHFIHNF 155
>gi|324505301|gb|ADY42279.1| Tristetraprolin [Ascaris suum]
Length = 388
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP----GQAICSNYSMYGIC 309
CR Y TG C YG C+F H G L LP + +C+ ++++G C
Sbjct: 158 CREYRGTGKCSYGDGCRFAH-----------GAGELRLPPQAHPKYKTQLCNKFALFGTC 206
Query: 310 KFGPTCRFDH 319
+G C+F H
Sbjct: 207 PYGARCQFIH 216
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQ-----GAQYREELPERNGQPDCGYYLKTGTCKYG 107
C YR TG C YG CRF H A + +Y+ +L C + GTC YG
Sbjct: 158 CREYRGTGKCSYGDGCRFAHGAGELRLPPQAHPKYKTQL--------CNKFALFGTCPYG 209
Query: 108 STCKYHHPK 116
+ C++ H +
Sbjct: 210 ARCQFIHRR 218
>gi|111226448|ref|XP_637949.2| hypothetical protein DDB_G0285973 [Dictyostelium discoideum AX4]
gi|90970577|gb|EAL64445.2| hypothetical protein DDB_G0285973 [Dictyostelium discoideum AX4]
Length = 437
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C ++ TG+C YG C+F H R+EL P C + G+C YG
Sbjct: 201 CRSFQETGVCRYGLKCQFAHG---------RDELRSVMRHPKYKTETCKTFYSIGSCPYG 251
Query: 108 STCKYHHPKD 117
S C++ H +D
Sbjct: 252 SRCRFIHTRD 261
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG C+YG C+F H ++ + + P + C + G C +G
Sbjct: 201 CRSFQETGVCRYGLKCQFAHGRDELR-------SVMRHPKYKTET-CKTFYSIGSCPYGS 252
Query: 314 TCRFDH 319
CRF H
Sbjct: 253 RCRFIH 258
>gi|392597302|gb|EIW86624.1| hypothetical protein CONPUDRAFT_134023 [Coniophora puteana
RWD-64-598 SS2]
Length = 292
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 306
P+C +Y G C G +C + HPKER A+ +GP+ + C Y +
Sbjct: 119 PECWWYAKYGYCSAGDECLYAHPKERRAECPDYRRGFCKLGPMCPRKHVRRVACQAY-LT 177
Query: 307 GICKFGPTCRFDHPYAG 323
G+C GP C HP G
Sbjct: 178 GLCPLGPECPRGHPKPG 194
>gi|409083443|gb|EKM83800.1| hypothetical protein AGABI1DRAFT_33150 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 290
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 306
P+C ++ G C G +C + HPKER + N +GP+ P + + + +
Sbjct: 121 PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPI-CPRKHVRKVACQLYLT 179
Query: 307 GICKFGPTCRFDHPYAGYPINYGLSLPP 334
G C GP C HP P+ PP
Sbjct: 180 GFCPMGPECPRGHPKPNLPLASAYEPPP 207
>gi|241952458|ref|XP_002418951.1| zinc finger-containing regulatory protein, putative [Candida
dubliniensis CD36]
gi|223642290|emb|CAX44259.1| zinc finger-containing regulatory protein, putative [Candida
dubliniensis CD36]
Length = 202
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG C Y + C+F H S + + P + C+N+S YG C++G
Sbjct: 143 CASFMKTGVCPYASKCQFAH--------GESELKHVERPPKWRSKPCANWSKYGSCRYGN 194
Query: 314 TCRFDH 319
C F H
Sbjct: 195 RCCFKH 200
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C Y S C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 143 CASFMKTGVCPYASKCQF---AHGESELKHVERPPKWRSKP-CANWSKYGSCRYGNRCCF 198
Query: 113 HH 114
H
Sbjct: 199 KH 200
>gi|146162775|ref|XP_001010054.2| tristetraproline, zinc finger protein [Tetrahymena thermophila]
gi|146146277|gb|EAR89809.2| tristetraproline, zinc finger protein [Tetrahymena thermophila
SB210]
Length = 294
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + TGTCK+G C F H KE++ G + L C + + GIC +G
Sbjct: 130 CKNWTATGTCKFGDKCSFAHGKEQLQ-------GKIHLHPNYKTKPCKKFFIKGICSYGN 182
Query: 314 TCRFDH 319
C++ H
Sbjct: 183 RCQYIH 188
>gi|303272789|ref|XP_003055756.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463730|gb|EEH61008.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 63
Score = 43.9 bits (102), Expect = 0.15, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG C+YG C+F H ++ + P+ + +C ++ G C +G
Sbjct: 6 CRSWEETGACRYGVKCQFAHGRDELR--------PVLRHPKYKTEVCRTFAQNGTCPYGT 57
Query: 314 TCRFDH 319
CRF H
Sbjct: 58 RCRFIH 63
>gi|72010393|ref|XP_782811.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like isoform
2 [Strongylocentrotus purpuratus]
Length = 386
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
CR Y GTCKYG C+F H I L + SR + +C + G C
Sbjct: 123 CRPYEENGTCKYGDKCQFAH-----------GIHELRVLSRHPKYKTELCRTFHTVGFCP 171
Query: 311 FGPTCRFDH 319
+GP C F H
Sbjct: 172 YGPRCHFIH 180
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y G C YG C+F H + ++ +Y+ EL C + G C YG
Sbjct: 123 CRPYEENGTCKYGDKCQFAHGIHELRVLSRHPKYKTEL--------CRTFHTVGFCPYGP 174
Query: 109 TCKY-HHPKDRNGAGP 123
C + H+P +R + P
Sbjct: 175 RCHFIHNPDERKLSSP 190
>gi|440294366|gb|ELP87383.1| hypothetical protein EIN_096400 [Entamoeba invadens IP1]
Length = 239
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 46 ARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA------QYREELPERNGQPDCGYYL 99
+ G C+F+ + G C G NC F+H Q+ +P C Y+
Sbjct: 153 VKYGTKPCIFFMQNGYCKKGDNCTFSHDVSTTHSTNTSPQKQFVSVDKLYRTKP-CKYFF 211
Query: 100 KTGTCKYGSTCKYHH 114
+TGTC+ G C + H
Sbjct: 212 ETGTCRKGEHCNFSH 226
>gi|389632125|ref|XP_003713715.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
gi|351646048|gb|EHA53908.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 23/107 (21%)
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
++ G SRN G + I+ A QN P R Q CR + TG+C G C++
Sbjct: 225 AVVGGVKFLRSRN----GNMVRHDIVKAQRQNGPVRKVQTPCRMFSTTGSCTKGPLCRYQ 280
Query: 273 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
H PL + AIC ++ + G C G +C H
Sbjct: 281 HD-------------PLKV------AICKDFLLKGDCIGGDSCDLSH 308
>gi|320168070|gb|EFW44969.1| tRNA-dihydrouridine synthase 3 [Capsaspora owczarzaki ATCC 30864]
Length = 741
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + GTC +G C+F H +E + + S+ P L YG CKFG
Sbjct: 157 CKQFAIKGTCSFGDKCRFVHEREANSDAVISDQCPFFL-------------QYGQCKFGL 203
Query: 314 TCRF 317
CRF
Sbjct: 204 ACRF 207
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C +G CRF H A A ++ C ++L+ G CK+G C++
Sbjct: 157 CKQFAIKGTCSFGDKCRFVHEREANSDAVISDQ---------CPFFLQYGQCKFGLACRF 207
Query: 113 H 113
Sbjct: 208 R 208
>gi|407041185|gb|EKE40575.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 222
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHP-------AYAAQGAQYREELPERNGQPDCGYYLKT 101
G C+F+ + G C GS+C F+H ++ Q ++ + + C Y+ +T
Sbjct: 137 GTKPCIFFMQNGYCKKGSSCTFSHDISSLNNHSFCQQNSKQFVSVDKLYRTKPCKYFFET 196
Query: 102 GTCKYGSTCKYHH 114
G C+ G C + H
Sbjct: 197 GVCRKGEHCNFSH 209
>gi|302805214|ref|XP_002984358.1| hypothetical protein SELMODRAFT_423539 [Selaginella moellendorffii]
gi|300147746|gb|EFJ14408.1| hypothetical protein SELMODRAFT_423539 [Selaginella moellendorffii]
Length = 710
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 15/69 (21%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G+ C+++RR G C G+ C F+H + C ++L C+YG+
Sbjct: 593 GKVQCVYFRR-GFCAKGNGCEFSHSVSSTPAV--------------CKFFLSGDGCRYGA 637
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 638 HCRYKHDSD 646
>gi|320592591|gb|EFX05021.1| hypothetical protein CMQ_5283 [Grosmannia clavigera kw1407]
Length = 740
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 48 PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYG 107
P P C +Y R G C G CRF+H Q LP Q C ++ + G C+ G
Sbjct: 55 PVRPQCTYYNR-GNCLRGMTCRFSHEGTPQQ-------LPAIRAQNPCHFFAR-GRCRNG 105
Query: 108 STCKYHHPKDRNG 120
+TC++ H + +G
Sbjct: 106 ATCRFSHNQAEDG 118
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
Q++ P +P C YY N G C G C+F H P LP+ Q C +
Sbjct: 49 QHIRPTPVRPQCTYY-NRGNCLRGMTCRFSHEG-----------TPQQLPAIRAQNPC-H 95
Query: 303 YSMYGICKFGPTCRFDHPYA 322
+ G C+ G TCRF H A
Sbjct: 96 FFARGRCRNGATCRFSHNQA 115
>gi|290985913|ref|XP_002675669.1| predicted protein [Naegleria gruberi]
gi|284089267|gb|EFC42925.1| predicted protein [Naegleria gruberi]
Length = 299
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YG C+F H + + +Y+ EL C Y GTC YG
Sbjct: 191 CRSWEETGYCRYGDKCQFAHGRHELRLVTRHHKYKSEL--------CNNYHYEGTCMYGI 242
Query: 109 TCKYHHPKDRNGAG-PVSFNILGLPMRQDEK 138
C + H DR G +S NI +P+ Q +
Sbjct: 243 RCCFIHSIDRCVIGRALSQNIDMVPIHQTSR 273
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 241 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ--- 297
+S N +R CR + TG C+YG C+F H + L L +R +
Sbjct: 178 ASYNGKDRYKTELCRSWEETGYCRYGDKCQFAHGRHE-----------LRLVTRHHKYKS 226
Query: 298 AICSNYSMYGICKFGPTCRFDH 319
+C+NY G C +G C F H
Sbjct: 227 ELCNNYHYEGTCMYGIRCCFIH 248
>gi|17544434|ref|NP_503017.1| Protein DCT-13 [Caenorhabditis elegans]
gi|5832785|emb|CAB55123.1| Protein DCT-13 [Caenorhabditis elegans]
Length = 205
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 22/149 (14%)
Query: 9 SNAVAN----QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
S+A+AN +D + E + RLK + + CL ++R C Y
Sbjct: 64 SSAIANCDPCTISDELREEMMRLKKKEKAFKTSL--------------CLSHKRGKTCIY 109
Query: 65 GSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCKY-HHPKDRNGAG 122
G C+F H + + Q RN + C + TG CKYG+ C++ H D A
Sbjct: 110 GEACKFAHGVHELRCQQTTRN--HRNYKTVLCDKFTTTGYCKYGARCQFIHRSMDTTPAA 167
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSFLP 151
P Q + S + + + SFLP
Sbjct: 168 KPMETADFKPNVQSDLSRAFALDSSSFLP 196
>gi|393218795|gb|EJD04283.1| hypothetical protein FOMMEDRAFT_155406 [Fomitiporia mediterranea
MF3/22]
Length = 914
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YG C+F H +E I + A + IC + + G C +G
Sbjct: 584 CRSWEEKGTCRYGPKCQFAHGEEEIRKVARH--------PKYKTEICRTFWVSGSCPYGK 635
Query: 314 TCRFDH---PYAGYP 325
C F H P +G P
Sbjct: 636 RCCFIHTELPTSGTP 650
>gi|432889388|ref|XP_004075252.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like [Oryzias
latipes]
Length = 390
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR Y +G+CKYGA C+F H E + GL P C + G C +
Sbjct: 151 CRTYEESGSCKYGAKCQFAHGLEELR----------GLSRHPKYKTEPCRTFHTIGFCPY 200
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 201 GARCHFIH 208
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +G C YG+ C+F H +G P+ +P C + G C YG+ C +
Sbjct: 151 CRTYEESGSCKYGAKCQFAHGLEELRGLSRH---PKYKTEP-CRTFHTIGFCPYGARCHF 206
Query: 113 HHPKDRNGAGPVSFNILGLPMRQ 135
H D A P + P+R
Sbjct: 207 IHNADEIQAAPHRQKLRPPPLRH 229
>gi|401882106|gb|EJT46379.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 2479]
gi|406700846|gb|EKD04008.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 8904]
Length = 324
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 306
P C +++ G C+ G +C ++HPK+R + N +GP + +C Y +
Sbjct: 121 PTCVWFVKLGKCELGGECLYYHPKDRRVECPDYNRGFCRLGPECPRRHVRRTLCQAY-LA 179
Query: 307 GICKFGPTCRFDHPYAGYPINYGLSLPPL 335
G C GP C+ HP P PP+
Sbjct: 180 GFCPDGPDCKQAHPSPKLPDPESYVNPPV 208
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 19/86 (22%)
Query: 43 PYPARPGEPD-----CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
P P P E + C Y R LC G NC + H P C +
Sbjct: 80 PLPTHPREREKKTTVCKHYLRN-LCKVGDNCEYTHDW-------------NLRTMPTCVW 125
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGP 123
++K G C+ G C Y+HPKDR P
Sbjct: 126 FVKLGKCELGGECLYYHPKDRRVECP 151
>gi|390359026|ref|XP_793440.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Strongylocentrotus purpuratus]
Length = 628
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
ERP C ++ C++G CKF H +++ A +I P C N+ +
Sbjct: 109 ERP----CLDFLRGAGCRFGDKCKFSHDIQKLMAGKAPDINPR----------CINFDKF 154
Query: 307 GICKFGPTCRF 317
G C +G CRF
Sbjct: 155 GSCPYGMLCRF 165
>gi|302692746|ref|XP_003036052.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
gi|300109748|gb|EFJ01150.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
Length = 287
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 306
P+C +Y G C G +C + HPKER + G L PS P + I C NY +
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPSCPRKHIRRIACQNY-LT 179
Query: 307 GICKFGPTCRFDHP 320
G C GP C HP
Sbjct: 180 GFCPLGPECPRGHP 193
>gi|302771343|ref|XP_002969090.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
gi|300163595|gb|EFJ30206.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
Length = 136
Score = 43.5 bits (101), Expect = 0.21, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHH------PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
C+ + G C YG C F H P A S AS PL +R +C+ + G
Sbjct: 63 CKRFFAEGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTR----LCNKWETTG 118
Query: 308 ICKFGPTCRFDHPYAG 323
C FG C F H AG
Sbjct: 119 SCPFGDKCHFAHGIAG 134
>gi|444322576|ref|XP_004181929.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
gi|387514975|emb|CCH62410.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
Length = 348
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 36/185 (19%)
Query: 136 DEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP 195
DE+S P ++ T P+S +A + +P++S + PL S +
Sbjct: 161 DEQSLPVFVNT----PASSTSFAHNN-----NNSPFVSRDTNNFSAVSPLSPSALPALTS 211
Query: 196 APGWNTYMGNI-GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC 254
N + NI P P SN S+RN ++ C
Sbjct: 212 ENLSNHNITNIKSPAVPKGSTSSNTNISNRNINKQLFKTEL------------------C 253
Query: 255 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 314
+ GTCKYG C+F H + S+ ++P C+N+ G C +G
Sbjct: 254 ETFTTKGTCKYGNKCQFAHGLHELNFKNISS----NFRTKP----CNNWEKLGYCPYGKR 305
Query: 315 CRFDH 319
C+F H
Sbjct: 306 CQFKH 310
>gi|302784404|ref|XP_002973974.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
gi|300158306|gb|EFJ24929.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
Length = 136
Score = 43.5 bits (101), Expect = 0.21, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHH------PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 307
C+ + G C YG C F H P A S AS PL +R +C+ + G
Sbjct: 63 CKRFFAEGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTR----LCNKWETTG 118
Query: 308 ICKFGPTCRFDHPYAG 323
C FG C F H AG
Sbjct: 119 SCPFGDKCHFAHGIAG 134
>gi|91080779|ref|XP_968440.1| PREDICTED: similar to Tis11-like protein [Tribolium castaneum]
Length = 250
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + + L + +C Y G C +GP
Sbjct: 102 CRPYEEFGVCKYGDKCQFAH--------GGAELRSLARHPKYKTELCRTYHTVGFCPYGP 153
Query: 314 TCRFDH 319
C F H
Sbjct: 154 RCHFVH 159
>gi|168053987|ref|XP_001779415.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669213|gb|EDQ55805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + TG C+Y + C+F H ++ P+ + +C +Y+ G+C +G
Sbjct: 455 CRSWEETGYCRYASKCQFAH--------GNDDLRPVPRHPKYKTELCRSYTETGLCNYGK 506
Query: 314 TCRFDH 319
CRF H
Sbjct: 507 RCRFIH 512
>gi|270005438|gb|EFA01886.1| hypothetical protein TcasGA2_TC007496 [Tribolium castaneum]
Length = 213
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + + L + +C Y G C +GP
Sbjct: 65 CRPYEEFGVCKYGDKCQFAH--------GGAELRSLARHPKYKTELCRTYHTVGFCPYGP 116
Query: 314 TCRFDH 319
C F H
Sbjct: 117 RCHFVH 122
>gi|391331981|ref|XP_003740417.1| PREDICTED: uncharacterized protein LOC100906487 [Metaseiulus
occidentalis]
Length = 485
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H E + L + +C + G+C +GP
Sbjct: 178 CRPFEENGICKYGDKCQFAHGIEELRS--------LARHPKYKTELCRTFHTTGLCPYGP 229
Query: 314 TCRFDH 319
C F H
Sbjct: 230 RCHFIH 235
>gi|17538616|ref|NP_501542.1| Protein OMA-1 [Caenorhabditis elegans]
gi|3874120|emb|CAA90977.1| Protein OMA-1 [Caenorhabditis elegans]
Length = 407
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ + TC + +C+F H +E + + + PL ++ +C Y+ G+C +G
Sbjct: 118 CQAWLESKTCSFADNCRFAHGEEELRPTF---VEPLQ-NNKYKTKLCDKYTTTGLCPYGK 173
Query: 314 TCRFDHPYAG 323
C F HP G
Sbjct: 174 RCLFIHPDHG 183
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 16/71 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNH------PAYAA--QGAQYREELPERNGQPDCGYYLKTGTC 104
C + + C + NCRF H P + Q +Y+ +L C Y TG C
Sbjct: 118 CQAWLESKTCSFADNCRFAHGEEELRPTFVEPLQNNKYKTKL--------CDKYTTTGLC 169
Query: 105 KYGSTCKYHHP 115
YG C + HP
Sbjct: 170 PYGKRCLFIHP 180
>gi|302782009|ref|XP_002972778.1| hypothetical protein SELMODRAFT_173103 [Selaginella moellendorffii]
gi|300159379|gb|EFJ25999.1| hypothetical protein SELMODRAFT_173103 [Selaginella moellendorffii]
Length = 962
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 16/69 (23%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G+ C+++R G C G+ C F+H + P C ++L C+YG+
Sbjct: 692 GKVQCVYFR-GGFCAKGNGCEFSHSV---------------SSTPVCKFFLSGDGCRYGA 735
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 736 HCRYKHDSD 744
>gi|336376373|gb|EGO04708.1| hypothetical protein SERLA73DRAFT_173919 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389412|gb|EGO30555.1| hypothetical protein SERLADRAFT_454858 [Serpula lacrymans var.
lacrymans S7.9]
Length = 344
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+C+YG+ C+F H +E I + A + IC + + G C +G
Sbjct: 29 CRSWEEKGSCRYGSKCQFAHGEEEIRKVARH--------PKYKTEICRTFWVSGACPYGK 80
Query: 314 TCRFDH 319
C F H
Sbjct: 81 RCCFIH 86
>gi|156357309|ref|XP_001624163.1| predicted protein [Nematostella vectensis]
gi|156210922|gb|EDO32063.1| predicted protein [Nematostella vectensis]
Length = 70
Score = 43.1 bits (100), Expect = 0.27, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + Q L + +C + G C +GP
Sbjct: 9 CRPFEESGTCKYGDKCQFAHGYHELRQ--------LARHPKYKTELCRTFHTIGFCPYGP 60
Query: 314 TCRFDH 319
C F H
Sbjct: 61 RCHFIH 66
>gi|449688559|ref|XP_002159721.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Hydra
magnipapillata]
Length = 332
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 55/146 (37%), Gaps = 27/146 (18%)
Query: 179 TQSYMPLIVSPSQ-GIVPAPG--WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
TQ ++SPS P P + + GN+ P + + S Q +L A +
Sbjct: 57 TQITKAQVLSPSSLSFYPMPSSPKDKFSGNVSPFRERAQSASF-------QEELDAQQRK 109
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
+ SS+ E CR + GTCKYG C+F H + GL P
Sbjct: 110 RNSTNSSRYKTEL-----CRPFEENGTCKYGDKCQFAHGFHELR----------GLNRHP 154
Query: 296 --GQAICSNYSMYGICKFGPTCRFDH 319
C Y G C +GP C F H
Sbjct: 155 KYKTEFCRTYHTIGFCPYGPRCHFIH 180
>gi|110751353|ref|XP_001121251.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1 [Apis mellifera]
Length = 415
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 254 CRYYMNTGTCKYGADCKFHHPK--------ERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
CRY+ N G C+ G +C++ H + E I S+AS++ +C + +
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGIWNDGNNETIISSSASSMN----------TVCRFFKL 59
Query: 306 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKI 364
GICKFG C F H N + SI SS H + IS +I+ D +S
Sbjct: 60 -GICKFGNQCYFRHSTETVDNNL---VNANSIESSSPGQHTSNISTPTTIKNVKDNTSIA 115
Query: 365 PNWVQ 369
WV+
Sbjct: 116 EEWVK 120
>gi|242210067|ref|XP_002470878.1| predicted protein [Postia placenta Mad-698-R]
gi|220730105|gb|EED83968.1| predicted protein [Postia placenta Mad-698-R]
Length = 213
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
PDC +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 107 PDCWWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPDCPRKHIRRVACQLYLTG 166
Query: 308 ICKFGPTCRFDHP 320
C GP C HP
Sbjct: 167 FCPLGPDCPRGHP 179
>gi|50555936|ref|XP_505376.1| YALI0F13497p [Yarrowia lipolytica]
gi|49651246|emb|CAG78183.1| YALI0F13497p [Yarrowia lipolytica CLIB122]
Length = 395
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C +++TG C YG C+F H + + ++R +L C +L+TGTC Y
Sbjct: 337 CSSFQKTGSCSYGEKCQFAHGEHELKNVDRPPKWRSKL--------CQNWLRTGTCAYND 388
Query: 109 TCKYHH 114
C + H
Sbjct: 389 RCCFKH 394
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + TG+C YG C+F H + + + P + +C N+ G C +
Sbjct: 337 CSSFQKTGSCSYGEKCQFAHGEHELKN--------VDRPPKWRSKLCQNWLRTGTCAYND 388
Query: 314 TCRFDH 319
C F H
Sbjct: 389 RCCFKH 394
>gi|325182068|emb|CCA16521.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 221
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + T +C YG C+F H + +G +Y+ C +L TG C YGS
Sbjct: 53 CKHFMETSICRYGPKCQFAHGMHELRGVVRHPKYK--------TTRCKTFLTTGKCTYGS 104
Query: 109 TCKYHHPKD 117
C++ H +D
Sbjct: 105 RCRFIHERD 113
>gi|395514832|ref|XP_003761616.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Sarcophilus harrisii]
Length = 211
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 310
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 311 FGPTCRFDHPYAGYPI 326
GP+C+F HP P+
Sbjct: 126 EGPSCKFMHPRFELPM 141
>gi|426201512|gb|EKV51435.1| hypothetical protein AGABI2DRAFT_62161 [Agaricus bisporus var.
bisporus H97]
Length = 290
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 306
P+C ++ G C G +C + HPKER + N +GP+ P + + + +
Sbjct: 121 PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPI-CPRKHVRKVACQLYLT 179
Query: 307 GICKFGPTCRFDHPYAGYPI 326
G C GP C HP P+
Sbjct: 180 GFCPMGPECPRGHPKPNLPL 199
>gi|30466247|ref|NP_848671.1| cleavage and polyadenylation specificity factor subunit 4 [Mus
musculus]
gi|348568560|ref|XP_003470066.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Cavia porcellus]
gi|37999672|sp|Q8BQZ5.1|CPSF4_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=Clipper homolog; AltName:
Full=Clipper/CPSF 30K
gi|26337803|dbj|BAC32587.1| unnamed protein product [Mus musculus]
Length = 211
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 310
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 311 FGPTCRFDHPYAGYPI 326
GP+C+F HP P+
Sbjct: 126 EGPSCKFMHPRFELPM 141
>gi|17566742|ref|NP_505069.1| Protein OMA-2 [Caenorhabditis elegans]
gi|351049995|emb|CCD64069.1| Protein OMA-2 [Caenorhabditis elegans]
Length = 393
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICSNYSMYGICK 310
C+ ++ + TC + +C+F H +E + S A N ++ +C Y+ G+C
Sbjct: 111 CQAWLESKTCAFAENCRFAHGEEELRPSLIEARQN-------NKYRTKLCDKYTTTGLCP 163
Query: 311 FGPTCRFDHPYAG 323
+G C F HP G
Sbjct: 164 YGKRCLFIHPDNG 176
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 16/73 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNH------PAY--AAQGAQYREELPERNGQPDCGYYLKTGTC 104
C + + C + NCRF H P+ A Q +YR +L C Y TG C
Sbjct: 111 CQAWLESKTCAFAENCRFAHGEEELRPSLIEARQNNKYRTKL--------CDKYTTTGLC 162
Query: 105 KYGSTCKYHHPKD 117
YG C + HP +
Sbjct: 163 PYGKRCLFIHPDN 175
>gi|384495790|gb|EIE86281.1| hypothetical protein RO3G_10992 [Rhizopus delemar RA 99-880]
Length = 260
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C YG+ C++ A+ AQ + E P+ Q C + KTG+C YG+ C +
Sbjct: 103 CRNWEETGQCRYGTKCQY---AHGAQDLREIERHPKYKTQK-CRTFHKTGSCPYGARCTF 158
Query: 113 HHP----KDRNGAGPVSF 126
H D + PV F
Sbjct: 159 RHFSLPGDDDHKEEPVMF 176
>gi|308161222|gb|EFO63678.1| Zinc finger domain-containing protein [Giardia lamblia P15]
Length = 193
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
SI N+ S RN L G ++SS + + +C + G C YG C+F
Sbjct: 2 SIVMRNIESSLRNVESLAVGQ-----TSSSTGAKYKTEFCNC--FAEFGRCDYGDRCQFA 54
Query: 273 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
H E SN+ + L C+++ +G C +G C F H
Sbjct: 55 HSMEEFQHRRRSNVKDMKL--------CTDFITHGYCPYGRRCNFLH 93
>gi|159117685|ref|XP_001709062.1| Zinc finger domain [Giardia lamblia ATCC 50803]
gi|157437177|gb|EDO81388.1| Zinc finger domain protein [Giardia lamblia ATCC 50803]
Length = 193
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
SI N+ S RN L G ++SS + + +C + G C YG C+F
Sbjct: 2 SIVMRNMESSLRNAESLAVGQ-----TSSSTGAKYKTEFCNC--FAEFGRCDYGDRCQFA 54
Query: 273 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
H E SN+ + L C+++ +G C +G C F H
Sbjct: 55 HSMEEFQHRRRSNVKDMKL--------CTDFITHGYCPYGRRCNFLH 93
>gi|148687046|gb|EDL18993.1| cleavage and polyadenylation specific factor 4, isoform CRA_b [Mus
musculus]
Length = 251
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 310
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 92 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 149
Query: 311 FGPTCRFDHPYAGYPI 326
GP+C+F HP P+
Sbjct: 150 EGPSCKFMHPRFELPM 165
>gi|388505774|gb|AFK40953.1| unknown [Medicago truncatula]
Length = 37
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 258 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
M G CK+G C++HHP++++A A I P GLP RP
Sbjct: 1 MRNGDCKFGLACRYHHPRDQVA--ARPLISPFGLPLRP 36
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMR 134
++ G CK+G C+YHHP+D+ A P+ + GLP+R
Sbjct: 1 MRNGDCKFGLACRYHHPRDQVAARPL-ISPFGLPLR 35
>gi|443685968|gb|ELT89404.1| hypothetical protein CAPTEDRAFT_193102 [Capitella teleta]
Length = 270
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
N D + A+ L ++ + + P PA+ C F++ G C YG++C F+H
Sbjct: 174 NDDHDLMTRALSVLHSGEDYDDDVYSSVGPSPAKKP---CFFFQDHGYCKYGADCCFSHD 230
Query: 74 AYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYHH 114
GA Y P++ D C ++L +C+YG C++ H
Sbjct: 231 V-PTGGATYTS--PQQRNTKDIPCRFFL-NDSCRYGDQCRFSH 269
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C ++ + G CKYGADC F H + A+ P R + I + + C++G
Sbjct: 210 CFFFQDHGYCKYGADCCFSH---DVPTGGATYTSP---QQRNTKDIPCRFFLNDSCRYGD 263
Query: 314 TCRFDH 319
CRF H
Sbjct: 264 QCRFSH 269
>gi|307947822|gb|ABV54790.2| Tis11-like protein [Ilyanassa obsoleta]
Length = 503
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H A + L + +C Y G C +GP
Sbjct: 152 CRPFEESGHCKYGDKCQFAH--------GAHELRNLSRHPKYKTELCRTYHSVGFCPYGP 203
Query: 314 TCRFDH 319
C F H
Sbjct: 204 RCHFIH 209
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YG C+F H A+ + +Y+ EL C Y G C YG
Sbjct: 152 CRPFEESGHCKYGDKCQFAHGAHELRNLSRHPKYKTEL--------CRTYHSVGFCPYGP 203
Query: 109 TCKYHHPKDRNGA 121
C + H +D + A
Sbjct: 204 RCHFIHNEDEHKA 216
>gi|427781319|gb|JAA56111.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 368
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGDKCQFAH--------GGHELRTLARHPKYKTELCRTFHTAGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 26/149 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YG C+F H + A+ +Y+ EL C + G C YG
Sbjct: 159 CRPFEESGTCKYGDKCQFAHGGHELRTLARHPKYKTEL--------CRTFHTAGFCPYGP 210
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSL--PTWSL 166
C + H D + N+L + S P + GSF L AG L P+ L
Sbjct: 211 RCHFIHNSDESRK-----NLL-TNINPPPPSRPKALSVGSF---GSLGSAGDLSPPSSPL 261
Query: 167 QRAPYLS---SRLQGTQSYMPLIVSPSQG 192
P+ + + +Q + L+ SP G
Sbjct: 262 YDDPFFAAPPTAFSFSQDFATLVTSPGFG 290
>gi|334312211|ref|XP_001382196.2| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Monodelphis domestica]
Length = 516
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 165 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 216
Query: 314 TCRFDH 319
C F H
Sbjct: 217 RCHFIH 222
>gi|238883900|gb|EEQ47538.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 203
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG C Y C+F H + + P S+P C+N+S YG C++G
Sbjct: 144 CASFMKTGVCPYANKCQFAHGENELKHVER----PPKWRSKP----CANWSKYGSCRYGN 195
Query: 314 TCRFDH 319
C F H
Sbjct: 196 RCCFKH 201
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C Y + C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 144 CASFMKTGVCPYANKCQF---AHGENELKHVERPPKWRSKP-CANWSKYGSCRYGNRCCF 199
Query: 113 HH 114
H
Sbjct: 200 KH 201
>gi|268535642|ref|XP_002632956.1| C. briggsae CBR-OMA-2 protein [Caenorhabditis briggsae]
Length = 379
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 95 CQAWLESKTCTFAENCRFAHGEEELRPSL---IEPRQ-NNKYKTKLCDKYTTTGLCPYGK 150
Query: 314 TCRFDHPYAG 323
C F HP G
Sbjct: 151 RCLFIHPDHG 160
>gi|410927364|ref|XP_003977119.1| PREDICTED: uncharacterized protein LOC101065621 [Takifugu rubripes]
Length = 415
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR + TGTCKYG+ C+F H + + GL P C + +G C +
Sbjct: 153 CRGFQETGTCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 202
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 203 GSRCHFIH 210
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ TG C YGS C+F H +G YR P+ +P C + G C YGS C +
Sbjct: 153 CRGFQETGTCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CRTFYNFGYCPYGSRCHF 208
Query: 113 HHPKDRNGAGPVS 125
H +G S
Sbjct: 209 IHEDKVSGGSLTS 221
>gi|224143966|ref|XP_002325139.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222866573|gb|EEF03704.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 549
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 281
RP+ D YMN GT K+GA+CKF+HP R Q+
Sbjct: 422 RPEAKDRASYMNIGTYKFGANCKFNHPIRRKNQA 455
>gi|395334078|gb|EJF66454.1| hypothetical protein DICSQDRAFT_150954 [Dichomitus squalens
LYAD-421 SS1]
Length = 750
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YGA C+F H +E + + + + IC + + G C +G
Sbjct: 438 CRSWEEKGTCRYGAKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 489
Query: 314 TCRFDH 319
C F H
Sbjct: 490 RCCFIH 495
>gi|126138312|ref|XP_001385679.1| hypothetical protein PICST_36883 [Scheffersomyces stipitis CBS
6054]
gi|126092957|gb|ABN67650.1| zinc finger-containing protein [Scheffersomyces stipitis CBS 6054]
Length = 223
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ + + G+C YG+ C+F A+ + E P+ +P C + K G+C+YG+ C +
Sbjct: 164 CVSFMKMGICPYGNKCQF---AHGENELKTVERPPKWRSKP-CANWAKLGSCRYGNRCCF 219
Query: 113 HH 114
H
Sbjct: 220 KH 221
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M G C YG C+F H + + P S+P C+N++ G C++G
Sbjct: 164 CVSFMKMGICPYGNKCQFAHGENELKTVER----PPKWRSKP----CANWAKLGSCRYGN 215
Query: 314 TCRFDH 319
C F H
Sbjct: 216 RCCFKH 221
>gi|341899233|gb|EGT55168.1| hypothetical protein CAEBREN_30011 [Caenorhabditis brenneri]
Length = 208
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q + +ANQ D++ E + R K D+ + C Y+R
Sbjct: 55 QAARSTLANQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 100
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKY + C++ H
Sbjct: 101 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYETRCQFIH 154
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 28/102 (27%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y TC YG C+F H + L LP P +C +S
Sbjct: 92 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 140
Query: 306 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA 347
G CK+ C+F H P L L S ++N+ A
Sbjct: 141 TGNCKYETRCQFIHKLVN---------PTLLALASGMLNNTA 173
>gi|384488209|gb|EIE80389.1| hypothetical protein RO3G_05094 [Rhizopus delemar RA 99-880]
Length = 277
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C YG+ C++ A+ AQ + E P+ Q C + KTG+C YG+ C +
Sbjct: 107 CRNWEETGQCRYGTKCQY---AHGAQDLREIERHPKYKTQ-KCRTFHKTGSCPYGARCTF 162
Query: 113 HH 114
H
Sbjct: 163 RH 164
>gi|347840920|emb|CCD55492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1169
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 245 LPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
LP D P C Y+ + +C G DCK H +A N L + ++PG C
Sbjct: 450 LPASVDGPQWVCYYWYHDNSCTKGVDCKMAH--------SADN--DLRVAAKPGSVTC-R 498
Query: 303 YSMYGICKFGPTCRFDH--PYAGYPINYGLSLPPLSILDSSLMNHQAI 348
Y + G C+ G C F H P+ G I+Y S P +++DS + +++
Sbjct: 499 YWIQGHCRNGIDCFFAHESPHNGRSISYT-SQPYSNVIDSEPLVEKSV 545
>gi|365990802|ref|XP_003672230.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
gi|343771005|emb|CCD26987.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
Length = 411
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + GTCKYG C+F H + SN ++P C N++ G C +G
Sbjct: 293 CESFTTKGTCKYGNKCQFAHGLHELKLKQRSN----NFRTKP----CVNWAKLGYCPYGK 344
Query: 314 TCRFDH 319
C F H
Sbjct: 345 RCCFKH 350
>gi|170085227|ref|XP_001873837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651389|gb|EDR15629.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 292
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C ++ G C G +C + HPKER + N G L P + + + + G
Sbjct: 121 PECWWFAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVRKVACQLYLTG 180
Query: 308 ICKFGPTCRFDHPYAGYP 325
C GP C HP P
Sbjct: 181 FCPLGPECLRGHPKPDLP 198
>gi|391332409|ref|XP_003740627.1| PREDICTED: uncharacterized protein LOC100904311 [Metaseiulus
occidentalis]
Length = 623
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 14/75 (18%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAA-------QGAQYREELP-----ERNGQPDCGYYL 99
DC+F+ R G C G NC+F H +G E+ P E++ P C Y+
Sbjct: 455 DCIFFIRFGKCHKGDNCKFQHDLKKVSICTKFLRGTCKAEKCPFSHEVEKDKMPLCSYFQ 514
Query: 100 KTGTCKYGSTCKYHH 114
+ G CK S C Y H
Sbjct: 515 R-GLCK-ASDCPYRH 527
>gi|17540280|ref|NP_502930.1| Protein F38C2.7 [Caenorhabditis elegans]
gi|3876907|emb|CAB05193.1| Protein F38C2.7 [Caenorhabditis elegans]
Length = 203
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCK 111
C F+RR C YG C+F H + + Q + RN + C + TG CKYG C+
Sbjct: 94 CGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRN--HRNYKTVLCNNFSTTGHCKYGIRCQ 151
Query: 112 YHH 114
+ H
Sbjct: 152 FIH 154
>gi|308474554|ref|XP_003099498.1| hypothetical protein CRE_01134 [Caenorhabditis remanei]
gi|308266687|gb|EFP10640.1| hypothetical protein CRE_01134 [Caenorhabditis remanei]
Length = 356
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 83 CQAWLESKTCTFAENCRFAHGEEELR---PSFIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 138
Query: 314 TCRFDHPYAG 323
C F HP G
Sbjct: 139 RCLFIHPDHG 148
>gi|213404030|ref|XP_002172787.1| cps3 [Schizosaccharomyces japonicus yFS275]
gi|212000834|gb|EEB06494.1| cps3 [Schizosaccharomyces japonicus yFS275]
Length = 499
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+R+ G C G NC F+H +L + + C Y+LK G CK+GS C
Sbjct: 41 CKFFRQ-GTCTSGKNCVFSH------------DLEPNSEKTVCKYFLK-GNCKFGSKCAL 86
Query: 113 HH 114
H
Sbjct: 87 DH 88
>gi|396473249|ref|XP_003839300.1| hypothetical protein LEMA_P029730.1 [Leptosphaeria maculans JN3]
gi|312215869|emb|CBX95821.1| hypothetical protein LEMA_P029730.1 [Leptosphaeria maculans JN3]
Length = 578
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHP-KDRNGAG 122
E+L E+ G+ C +L+TG CK+ + C+Y HP D+ G G
Sbjct: 499 EKLAEQQGKKTCETWLRTGRCKFSNKCRYAHPAADKGGEG 538
>gi|344288823|ref|XP_003416146.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Loxodonta
africana]
Length = 497
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 314 TCRFDH 319
C F H
Sbjct: 213 RCHFIH 218
>gi|118344116|ref|NP_001071879.1| zinc finger protein [Ciona intestinalis]
gi|70571730|dbj|BAE06810.1| zinc finger protein [Ciona intestinalis]
Length = 380
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H K + + + + +C Y G C +GP
Sbjct: 136 CRPFEENGKCKYGDKCQFAHGKHELRR--------MVRHPKYKTELCRTYHTSGFCPYGP 187
Query: 314 TCRFDHPYAGYPINYGLSLP---------PLSILDSSLMNHQ 346
C F H I + P P+ I + L HQ
Sbjct: 188 RCHFIHNQEDVGIAKKQTQPTRIQSQTSVPVKINNRQLSQHQ 229
>gi|350606345|ref|NP_001108269.2| zinc finger protein 36, C3H type-like 2, gene 2 [Xenopus laevis]
Length = 289
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C +R G C YG+ C F HP + C ++ G C YG+ C +
Sbjct: 148 CRLWRSPGGCPYGARCHFQHPKSVREA---------------CRHFAALGECPYGARCHF 192
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 193 SHSPPLDRWGSG 204
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 61 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 112
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PVS + +P R+
Sbjct: 113 RCLFIHSPQERREPPVSPDTPRIPPRR 139
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 19/66 (28%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + + G C YGA C F HPK + C +++ G C +G
Sbjct: 148 CRLWRSPGGCPYGARCHFQHPKSV-------------------REACRHFAALGECPYGA 188
Query: 314 TCRFDH 319
C F H
Sbjct: 189 RCHFSH 194
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR---PGQAICSNYSMYGICK 310
CR + GTC YG C F H + + S P P R P + C + G C
Sbjct: 99 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCP 158
Query: 311 FGPTCRFDHP 320
+G C F HP
Sbjct: 159 YGARCHFQHP 168
>gi|170086075|ref|XP_001874261.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651813|gb|EDR16053.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 835
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YGA C+F H ++ + + + + IC + + G C +G
Sbjct: 532 CRSWEEKGTCRYGAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 583
Query: 314 TCRFDH---PYAGYPINYG 329
C F H P +G P G
Sbjct: 584 RCCFIHTELPSSGAPPTAG 602
>gi|403374207|gb|EJY87042.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 542
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CK+ C F H K + + + LPS IC+ + C +G
Sbjct: 360 CRNWEISGKCKFMDSCSFAHGKHEL-------VKKVHLPSNYKTKICTQFHTTAFCPYGN 412
Query: 314 TCRFDH 319
C+F H
Sbjct: 413 RCQFLH 418
>gi|170092415|ref|XP_001877429.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647288|gb|EDR11532.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 2289
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA------ICSNYS 304
+P C+Y C+ GA+CKF H I+ S + P G S P ++ +C+ Y
Sbjct: 4 RPTCKYLNTPRGCRQGANCKFSHDSSAISNSPVAR--PSGSQSSPARSHNTPAGVCNFYW 61
Query: 305 MYGICKFGPTCRFDH 319
G C G CRF H
Sbjct: 62 SRGDCNRGFECRFKH 76
>gi|410926251|ref|XP_003976592.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 398
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 311
CR Y +GTCKYG C+F H + + G+ P +C + G C +
Sbjct: 157 CRTYEESGTCKYGTKCQFAHGLDELR----------GISRHPKYKTELCRTFHTIGFCPY 206
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 207 GARCHFVH 214
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C YG+ C+F H +G +Y+ EL C + G C YG+
Sbjct: 157 CRTYEESGTCKYGTKCQFAHGLDELRGISRHPKYKTEL--------CRTFHTIGFCPYGA 208
Query: 109 TCKYHHPKDRNGAGP 123
C + H D P
Sbjct: 209 RCHFVHNADEASPSP 223
>gi|324521953|gb|ADY47962.1| Tristetraprolin [Ascaris suum]
Length = 203
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +TG C YG CKF H +E + + + P R A C Y + G C +G
Sbjct: 59 CRAWTDTGRCNYGNKCKFAHGEEDLRKLPPEPVKVYNNP-RYRTAPCLKYRLLGSCPYGD 117
Query: 314 TCRFDH 319
C + H
Sbjct: 118 RCSYIH 123
>gi|324508112|gb|ADY43428.1| Protein TIS11 [Ascaris suum]
Length = 305
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 230 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 289
G G Q +S+ P+ CR +M+ G C YG C++ H + P+
Sbjct: 39 GNGVQSSTISSQQPKNPKLYKTELCRSWMDHGRCNYGDRCQYAHGEHEKR--------PI 90
Query: 290 GLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+ A C +Y G C +GP C F H
Sbjct: 91 PRHPKYKTAYCQSYHQSGYCPYGPRCHFIH 120
>gi|149246628|ref|XP_001527739.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447693|gb|EDK42081.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 545
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ- 78
+EE W I+ +GG S +P+C +Y RTG+C G++C + H +
Sbjct: 200 MEELKWNDDIYKKHQGGYYKVCSRKIKTRSKPNCRYYTRTGICQRGASCNYFHDQLKIKI 259
Query: 79 ------------GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
P + P C Y+L+ G C + C+Y H
Sbjct: 260 CPHFLNDKCIGNSMCLLSHRPNEHNTPMCRYFLQ-GNCS-NTRCRYMH 305
>gi|67472471|ref|XP_652039.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468845|gb|EAL46653.1| hypothetical protein EHI_055700 [Entamoeba histolytica HM-1:IMSS]
gi|449703561|gb|EMD43992.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 222
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-------CGYYLKT 101
G C+F+ + G C G +C F+H + + ++ ++ D C Y+ +T
Sbjct: 137 GTKPCIFFMQNGYCKKGGSCTFSHDVSSLNNHSFCQQNSKQFVSVDKLYRTKPCKYFFET 196
Query: 102 GTCKYGSTCKYHH 114
G C+ G C + H
Sbjct: 197 GVCRKGEHCNFSH 209
>gi|348688082|gb|EGZ27896.1| hypothetical protein PHYSODRAFT_353449 [Phytophthora sojae]
Length = 250
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C++Y G+C+YG+ C+F H +E + G L P + C + G C +G
Sbjct: 48 CKHYTENGSCRYGSKCQFAHGEEELR-------GVLRHP-KYKTTRCKAFMSTGKCMYGS 99
Query: 314 TCRFDH 319
CRF H
Sbjct: 100 RCRFIH 105
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y G C YGS C+F H +G + C ++ TG C YGS C++
Sbjct: 48 CKHYTENGSCRYGSKCQFAHGEEELRGVLRHPKYKTTR----CKAFMSTGKCMYGSRCRF 103
Query: 113 HHPK 116
H +
Sbjct: 104 IHTR 107
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + N G C GA C+F H + ++ AS + + + Q++C N+ G C G
Sbjct: 400 CRNFQN-GRCMRGASCRFAHTGQVAQEAPASAVEEVSEYQKRFQSVCYNWQRGGSCVRGD 458
Query: 314 TCRFDH 319
C F H
Sbjct: 459 NCSFQH 464
>gi|388856515|emb|CCF49821.1| uncharacterized protein [Ustilago hordei]
Length = 681
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 311
P C +Y+ G C+ G C + H + L G IC N+S YG C+
Sbjct: 390 PHCVHYLRAGKCRNGKQCFYTHSDK--------------LKDGTGTKICRNFSDYGWCER 435
Query: 312 GPTCRFDHPY 321
G C H Y
Sbjct: 436 GKDCEERHTY 445
>gi|255718555|ref|XP_002555558.1| KLTH0G12100p [Lachancea thermotolerans]
gi|238936942|emb|CAR25121.1| KLTH0G12100p [Lachancea thermotolerans CBS 6340]
Length = 279
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YG NC+F H Q +++E + +P C +++TG+C YG C +
Sbjct: 182 CESFSTKGSCKYGHNCQFAH---GLQELKFKERNNKFRTKP-CVNWMRTGSCPYGQRCCF 237
Query: 113 HHPKDRN 119
H D++
Sbjct: 238 KHGSDQD 244
>gi|294658177|ref|XP_460514.2| DEHA2F03410p [Debaryomyces hansenii CBS767]
gi|202952931|emb|CAG88827.2| DEHA2F03410p [Debaryomyces hansenii CBS767]
Length = 287
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C Y+ G C YG C+F H + + + P S+P C+N+S +G C++G
Sbjct: 228 CASYIKMGICPYGNKCQFAHGENELKSVSR----PPKWRSKP----CANWSKFGSCRYGN 279
Query: 314 TCRFDH 319
C F H
Sbjct: 280 RCCFKH 285
>gi|444705919|gb|ELW47297.1| Thyroid adenoma-associated protein [Tupaia chinensis]
Length = 2301
Score = 42.0 bits (97), Expect = 0.53, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 1896 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 1947
Query: 314 TCRFDHP 320
C F P
Sbjct: 1948 RCHFIPP 1954
>gi|391330077|ref|XP_003739491.1| PREDICTED: uncharacterized protein LOC100902394 [Metaseiulus
occidentalis]
Length = 354
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 220 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 279
+ + RN A ++ + N R CR + G CKYGA C+F H
Sbjct: 64 LQNRRNNMSDNADDNLNTTADGVSNRSSRYKTELCRPFEENGMCKYGARCQFAH------ 117
Query: 280 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
A+ + L + +C + G+C +G C F H
Sbjct: 118 --GAAELRTLARHPKYKSQLCRTFHSNGLCPYGHRCHFIH 155
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 26/118 (22%)
Query: 4 NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCG 63
N Q + N +++ + DN+ N GV+ S +R C + G+C
Sbjct: 63 NLQNRRNNMSDNADDNL-----------NTTADGVSNRS---SRYKTELCRPFEENGMCK 108
Query: 64 YGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
YG+ C+F H A A+ +Y+ +L C + G C YG C + H +D
Sbjct: 109 YGARCQFAHGAAELRTLARHPKYKSQL--------CRTFHSNGLCPYGHRCHFIHNQD 158
>gi|448524536|ref|XP_003871522.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis Co 90-125]
gi|380353344|emb|CCG26100.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis]
Length = 293
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG C YG C+F H + + + P + C+N++ YG C++G
Sbjct: 234 CGPFMKTGNCPYGHKCQFAHGQAELKH--------IERPPKWRSKPCANWAKYGSCRYGN 285
Query: 314 TCRFDH 319
C F H
Sbjct: 286 RCCFKH 291
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG C YG C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 234 CGPFMKTGNCPYGHKCQF---AHGQAELKHIERPPKWRSKP-CANWAKYGSCRYGNRCCF 289
Query: 113 HH 114
H
Sbjct: 290 KH 291
>gi|57526296|ref|NP_001009765.1| tristetraprolin [Ovis aries]
gi|54036437|sp|Q6S9E0.1|TTP_SHEEP RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Zinc finger
protein 36 homolog; Short=Zfp-36
gi|39777543|gb|AAR31111.1| tristetraprolin [Ovis aries]
Length = 325
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
CR + +G C+YGA C+F H +G L PSR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|5731751|emb|CAA71245.2| CTH1 protein [Cyprinus carpio]
Length = 327
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 254 CRYYMNTGTCKYGADCKFHHPK---ERIAQSAASNIGPLGLPS--RPGQAICSNYSMYGI 308
CR + G C +G C F H + E P+ +P A+C +S +G
Sbjct: 137 CRTFRAFGVCPFGTRCHFLHVEGGSESDGGEEEQTCQPMSQSQEWKPRGALCRTFSAFGF 196
Query: 309 CKFGPTCRFDH 319
C +G CRF H
Sbjct: 197 CLYGTRCRFQH 207
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 23/153 (15%)
Query: 173 SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG 232
S L ++ +PL+ SPS + P W L Y+ R Q G
Sbjct: 29 SGSLSLAKALLPLVESPSPPMTP---WLCSTRYKTELCSRYAETGTCKYAERCQFAHG-- 83
Query: 233 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLG 290
+H L S++ + + CR Y G C YG C F H ++R + N+
Sbjct: 84 --LHDLHVPSRHPKYKTEL--CRTYHTAGYCVYGTRCLFVHNLKEQRPVRQRCRNVP--- 136
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 323
C + +G+C FG C F H G
Sbjct: 137 ---------CRTFRAFGVCPFGTRCHFLHVEGG 160
>gi|324510740|gb|ADY44489.1| Tristetraprolin [Ascaris suum]
Length = 455
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
C+ ++ C + +C+F H +E + P +P + + +C Y++ G+C
Sbjct: 193 CQAWVKNNRCNFAENCRFAHGEEELR--------PCKIPIKNAKYKTKLCDKYTLTGLCP 244
Query: 311 FGPTCRFDHPYA 322
+G C F HP A
Sbjct: 245 YGNRCLFIHPDA 256
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA-------AQGAQYREELPERNGQ 92
+ SP P C + + C + NCRF H + A+Y+ +L
Sbjct: 180 RISPKPDIYKTEMCQAWVKNNRCNFAENCRFAHGEEELRPCKIPIKNAKYKTKL------ 233
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
C Y TG C YG+ C + HP D NG
Sbjct: 234 --CDKYTLTGLCPYGNRCLFIHP-DANG 258
>gi|313235948|emb|CBY25091.1| unnamed protein product [Oikopleura dioica]
Length = 288
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +TG C+YG C+F H ++ + L + +C ++ G+C +G
Sbjct: 52 CRSWDDTGFCRYGKKCQFAHSQKELRN--------LMRHPKYKTEMCDSFHTVGVCPYGN 103
Query: 314 TCRFDH 319
C F H
Sbjct: 104 RCHFVH 109
>gi|163916509|gb|AAI57454.1| LOC100137650 protein [Xenopus laevis]
Length = 279
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C +R G C YG+ C F HP + C ++ G C YG+ C +
Sbjct: 138 CRLWRSPGGCPYGARCHFQHPKSVREA---------------CRHFAALGECPYGARCHF 182
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 183 SHSPPLDRWGSG 194
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PVS + +P R+
Sbjct: 103 RCLFIHSPQERREPPVSPDTPRIPPRR 129
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 19/66 (28%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + + G C YGA C F HPK + C +++ G C +G
Sbjct: 138 CRLWRSPGGCPYGARCHFQHPKS-------------------VREACRHFAALGECPYGA 178
Query: 314 TCRFDH 319
C F H
Sbjct: 179 RCHFSH 184
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR---PGQAICSNYSMYGICK 310
CR + GTC YG C F H + + S P P R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCP 148
Query: 311 FGPTCRFDHP 320
+G C F HP
Sbjct: 149 YGARCHFQHP 158
>gi|253735916|gb|ACT34179.1| ZFP36 [Ovis aries]
Length = 325
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
CR + +G C+YGA C+F H +G L PSR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|145533841|ref|XP_001452665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420364|emb|CAK85268.1| unnamed protein product [Paramecium tetraurelia]
Length = 198
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+Y+ C YG C F H + I Q +P +C NY G C +G
Sbjct: 97 CKYWAIEDYCPYGQQCAFAHGQHEIRQKT-------HVPHNYKTQVCKNYITIGYCCYGE 149
Query: 314 TCRFDHP 320
C+F HP
Sbjct: 150 RCQFKHP 156
>gi|302694935|ref|XP_003037146.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
gi|300110843|gb|EFJ02244.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
Length = 735
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YGA C+F H +E + + + IC + + G C +G
Sbjct: 438 CRSWEEKGTCRYGAKCQFAHGEEELRT--------VQRHPKYKTEICRTFWVSGSCPYGK 489
Query: 314 TCRFDH 319
C F H
Sbjct: 490 RCCFIH 495
>gi|223649040|gb|ACN11278.1| Butyrate response factor 1 [Salmo salar]
Length = 400
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR Y +GTCKYGA C+F H + GL P C + G C +
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGMDEQR----------GLSRHPKYKTEPCRTFHTIGFCPY 211
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 212 GARCHFIH 219
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+A + P R C Y +G C YG+ C+F H +G P+ +P C
Sbjct: 147 LAPSPPISTRYKTEMCRTYEESGTCKYGAKCQFAHGMDEQRGLSRH---PKYKTEP-CRT 202
Query: 98 YLKTGTCKYGSTCKYHHPKDR 118
+ G C YG+ C + H D
Sbjct: 203 FHTIGFCPYGARCHFIHNADE 223
>gi|115313847|gb|AAI24447.1| Zgc:162730 protein [Danio rerio]
Length = 335
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYGA C+F H + + G P QA C + +G C +G
Sbjct: 117 CRSFQEHGSCKYGAKCQFAHGENELR-------GLYRHPKYKTQA-CRTFYQFGYCPYGS 168
Query: 314 TCRFDH 319
C F H
Sbjct: 169 RCHFIH 174
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPA-RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
++ ++ R+K HD G + P+ R C ++ G C YG+ C+F H
Sbjct: 82 SLNDSFSRMKPHDVPPPPGFPPLATLPSNRYKTELCRSFQEHGSCKYGAKCQFAHGENEL 141
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
+G YR P+ Q C + + G C YGS C + H +
Sbjct: 142 RGL-YRH--PKYKTQA-CRTFYQFGYCPYGSRCHFIHEE 176
>gi|405960411|gb|EKC26337.1| Butyrate response factor 1 [Crassostrea gigas]
Length = 396
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H A + L + +C + G C +GP
Sbjct: 119 CRPFEESGHCKYGDKCQFAH--------GAHELRNLNRHPKYKTELCRTFHTIGFCPYGP 170
Query: 314 TCRFDH 319
C F H
Sbjct: 171 RCHFIH 176
>gi|2353340|gb|AAB69448.1| Tis11 family protein [Crassostrea virginica]
Length = 401
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H A + L + +C + G C +GP
Sbjct: 121 CRPFEESGHCKYGDKCQFAH--------GAHELRNLNRHPKYKTELCRTFHTIGFCPYGP 172
Query: 314 TCRFDH 319
C F H
Sbjct: 173 RCHFIH 178
>gi|431912731|gb|ELK14749.1| Butyrate response factor 2 [Pteropus alecto]
Length = 446
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 111 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 162
Query: 314 TCRFDH 319
C F H
Sbjct: 163 RCHFIH 168
>gi|410897635|ref|XP_003962304.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 370
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 34/114 (29%)
Query: 206 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 265
+GP SPT GS + SSR + +L CR + G+CKY
Sbjct: 127 LGPASPT--GGSGQVNSSRYKTEL------------------------CRPFEENGSCKY 160
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C+F H + L + +C + G C +GP C F H
Sbjct: 161 GDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGPRCHFIH 206
>gi|307169532|gb|EFN62174.1| Protein TIS11 [Camponotus floridanus]
Length = 361
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G+CKYG C+F H + L + +C + G C +GP
Sbjct: 39 CRPYEESGSCKYGDKCQFAH--------GYGELRNLARHPKYKTELCRTFHTIGFCPYGP 90
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 91 RCHFIHNF 98
>gi|146218585|gb|AAI39895.1| Zgc:162730 protein [Danio rerio]
Length = 336
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYGA C+F H + + G P QA C + +G C +G
Sbjct: 118 CRSFQEHGSCKYGAKCQFAHGENELR-------GLYRHPKYKTQA-CRTFYQFGYCPYGS 169
Query: 314 TCRFDH 319
C F H
Sbjct: 170 RCHFIH 175
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPA-RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
++ ++ R+K HD G + P+ R C ++ G C YG+ C+F H
Sbjct: 83 SLNDSFSRMKPHDVPPPPGFPPLATLPSNRYKTELCRSFQEHGSCKYGAKCQFAHGENEL 142
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
+G YR P+ Q C + + G C YGS C + H +
Sbjct: 143 RGL-YRH--PKYKTQA-CRTFYQFGYCPYGSRCHFIHEE 177
>gi|47204423|emb|CAG14799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 477
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 311
CR Y +GTCKYG C+F H + + G+ P +C + G C +
Sbjct: 153 CRTYEESGTCKYGTKCQFAHGVDELR----------GISRHPKYKTELCRTFHTIGFCPY 202
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 203 GARCHFIH 210
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C YG+ C+F H +G +Y+ EL C + G C YG+
Sbjct: 153 CRTYEESGTCKYGTKCQFAHGVDELRGISRHPKYKTEL--------CRTFHTIGFCPYGA 204
Query: 109 TCKYHHPKD 117
C + H D
Sbjct: 205 RCHFIHNAD 213
>gi|348541959|ref|XP_003458454.1| PREDICTED: hypothetical protein LOC100700871 [Oreochromis
niloticus]
Length = 300
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGP----LGLPSR--- 294
NL R + P CR + G C +G C F H K+ + +N+G + P R
Sbjct: 130 NLRRRRNVP-CRTFRAFGICPFGTRCNFLHVEGKDEDGRHDLANVGEKTSLVQNPQRHQK 188
Query: 295 -----PGQAICSNYSMYGICKFGPTCRFDH 319
P A+C +S +G C +G C F H
Sbjct: 189 TKGWKPRGALCRTFSAFGFCLYGTRCHFQH 218
>gi|308509954|ref|XP_003117160.1| CRE-MOE-3 protein [Caenorhabditis remanei]
gi|308242074|gb|EFO86026.1| CRE-MOE-3 protein [Caenorhabditis remanei]
Length = 383
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ + TC + +C+F H ++ + S I P ++ +C Y+ G+C +G
Sbjct: 144 CQAWLESKTCTFAENCRFAHGEDELR---PSKIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 199
Query: 314 TCRFDHPYAG 323
C F HP G
Sbjct: 200 RCLFIHPDHG 209
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 19/131 (14%)
Query: 4 NRQVKSNAVANQSADNIE-EAIWRLKIH--DN-QEGGGVAQASP--YPARP--GE----- 50
N Q++ N+ I+ A+ RL + DN Q GG SP +P R GE
Sbjct: 76 NEQLRKEIAENKQIQTIQMRAMGRLPTNPADNIQAFGGSPLVSPHGFPQRAPRGERRMQK 135
Query: 51 PD------CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTC 104
P+ C + + C + NCRF H + ++ + C Y TG C
Sbjct: 136 PESYKTVICQAWLESKTCTFAENCRFAHGEDELRPSKIEPRQNNKYKTKLCDKYTTTGLC 195
Query: 105 KYGSTCKYHHP 115
YG C + HP
Sbjct: 196 PYGKRCLFIHP 206
>gi|348523051|ref|XP_003449037.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 422
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR Y +G CKYGA C+F H + + GL P C + G C +
Sbjct: 174 CRTYEESGACKYGAKCQFAHGMDELR----------GLNRHPKYKTEPCRTFHTIGFCPY 223
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 224 GARCHFIH 231
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +G C YG+ C+F H +G P+ +P C + G C YG+ C +
Sbjct: 174 CRTYEESGACKYGAKCQFAHGMDELRGLNRH---PKYKTEP-CRTFHTIGFCPYGARCHF 229
Query: 113 HHPKDRNGAG 122
H D AG
Sbjct: 230 IHNADELNAG 239
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 21/83 (25%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPA-----------YAAQGAQYREE-LPERNGQP------ 93
+C FYR+ G C +G NCR+ H +A Q EE + R QP
Sbjct: 115 ECAFYRQ-GFCSHGPNCRYRHIKLAREECPETADFALQSKVAEEENVKRRKTQPVNEFYK 173
Query: 94 --DCGYYLKTGTCKYGSTCKYHH 114
C ++ K G+C +G C + H
Sbjct: 174 IAICKHWEKLGSCPFGDECHFAH 196
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 22/81 (27%)
Query: 246 PERPDQPD----CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 301
PE P QPD CR ++ G C YG+DC+F H K A+S + +C
Sbjct: 1054 PENP-QPDNQRVCREWL-AGKCLYGSDCRFAHEKRYDAKS---------------KKLCR 1096
Query: 302 NYSMYGICKFGPTCRFDHPYA 322
++ M G C G C F H A
Sbjct: 1097 DF-MMGKCHRGAECVFSHDTA 1116
>gi|389742287|gb|EIM83474.1| hypothetical protein STEHIDRAFT_160055 [Stereum hirsutum FP-91666
SS1]
Length = 803
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YG C+F H +E I + + + IC + + G C +G
Sbjct: 487 CRSWEEKGTCRYGPKCQFAHGEEEIRK--------VSRHPKYKTEICRTFWVSGSCPYGK 538
Query: 314 TCRFDH 319
C F H
Sbjct: 539 RCCFIH 544
>gi|449550650|gb|EMD41614.1| hypothetical protein CERSUDRAFT_128533 [Ceriporiopsis subvermispora
B]
Length = 780
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+C+YGA C+F H +E + + + + IC + + G C +G
Sbjct: 470 CRSWEEKGSCRYGAKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 521
Query: 314 TCRFDH---PYAGYP 325
C F H P +G P
Sbjct: 522 RCCFIHTELPASGAP 536
>gi|196016786|ref|XP_002118243.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
gi|190579144|gb|EDV19246.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
Length = 102
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C Y G C +GP
Sbjct: 41 CRPFEESGTCKYGDKCQFAH--------GIHELRALARHPKYKTELCRTYHTIGFCPYGP 92
Query: 314 TCRFDH 319
C F H
Sbjct: 93 RCHFIH 98
>gi|149034888|gb|EDL89608.1| rCG42591, isoform CRA_c [Rattus norvegicus]
Length = 180
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 310
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 36 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 93
Query: 311 FGPTCRFDHPYAGYPI 326
GP+C+F HP P+
Sbjct: 94 EGPSCKFMHPRFELPM 109
>gi|359320685|ref|XP_003639394.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Canis
lupus familiaris]
Length = 491
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 163 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 214
Query: 314 TCRFDH 319
C F H
Sbjct: 215 RCHFIH 220
>gi|68477649|ref|XP_717137.1| hypothetical protein CaO19.5334 [Candida albicans SC5314]
gi|68477812|ref|XP_717058.1| hypothetical protein CaO19.12794 [Candida albicans SC5314]
gi|46438755|gb|EAK98081.1| hypothetical protein CaO19.12794 [Candida albicans SC5314]
gi|46438837|gb|EAK98162.1| hypothetical protein CaO19.5334 [Candida albicans SC5314]
Length = 203
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M TG C Y C+F H + + P S+P C+N++ YG C++G
Sbjct: 144 CASFMKTGVCPYANKCQFAHGENELKHVER----PPKWRSKP----CANWTKYGSCRYGN 195
Query: 314 TCRFDH 319
C F H
Sbjct: 196 RCCFKH 201
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C Y + C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 144 CASFMKTGVCPYANKCQF---AHGENELKHVERPPKWRSKP-CANWTKYGSCRYGNRCCF 199
Query: 113 HH 114
H
Sbjct: 200 KH 201
>gi|330797093|ref|XP_003286597.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
gi|325083422|gb|EGC36875.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
Length = 561
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + + C+YG CKF H E ++ ++G C +Y YG CKFG
Sbjct: 2 CDKMVQSEKCEYGDKCKFSHNVEEYLKTKPKSLGK-----------CLSYEAYGKCKFGI 50
Query: 314 TCRF--DH 319
C F DH
Sbjct: 51 NCYFGEDH 58
>gi|17544438|ref|NP_503019.1| Protein Y116A8C.19 [Caenorhabditis elegans]
gi|5832787|emb|CAB55125.1| Protein Y116A8C.19 [Caenorhabditis elegans]
Length = 196
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCK 111
C F RR C YG C+F H + + Q ++ RN + C + TG CKYG+ C+
Sbjct: 89 CGFQRRGQKCIYGEQCKFAHSVHELRFTQAKK--THRNYKTVLCDKFSTTGYCKYGARCQ 146
Query: 112 YHH 114
+ H
Sbjct: 147 FIH 149
>gi|345497755|ref|XP_001599033.2| PREDICTED: hypothetical protein LOC100113609 [Nasonia vitripennis]
Length = 386
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G+CKYG C+F H + + L + +C + G C +GP
Sbjct: 84 CRPFEESGSCKYGDKCQFAH--------GYNELRNLARHPKYKTELCRTFHKIGFCPYGP 135
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 136 RCHFVHNF 143
>gi|308490987|ref|XP_003107685.1| hypothetical protein CRE_13265 [Caenorhabditis remanei]
gi|308250554|gb|EFO94506.1| hypothetical protein CRE_13265 [Caenorhabditis remanei]
Length = 387
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 110 CQAWLESKTCTFAENCRFAHGEEELR---PSFIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 165
Query: 314 TCRFDHPYAG 323
C F HP G
Sbjct: 166 RCLFIHPDNG 175
>gi|344302417|gb|EGW32691.1| hypothetical protein SPAPADRAFT_60049 [Spathaspora passalidarum
NRRL Y-27907]
Length = 353
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + G+C YG+ C+F A+ + E P+ +P C + K G+C+YG+ C +
Sbjct: 294 CASFMKMGICPYGNKCQF---AHGENELKVVERPPKWRSKP-CVNWAKYGSCRYGNRCCF 349
Query: 113 HH 114
H
Sbjct: 350 KH 351
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M G C YG C+F H + + P S+P C N++ YG C++G
Sbjct: 294 CASFMKMGICPYGNKCQFAHGENELKVVER----PPKWRSKP----CVNWAKYGSCRYGN 345
Query: 314 TCRFDH 319
C F H
Sbjct: 346 RCCFKH 351
>gi|339256988|ref|XP_003370127.1| conserved hypothetical protein [Trichinella spiralis]
gi|316964971|gb|EFV49843.1| conserved hypothetical protein [Trichinella spiralis]
Length = 181
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY++N C++G++C F H + S N P C N +G CK+GP
Sbjct: 35 CRYFVNGPGCRFGSNCFFAHNLVELRPSMYRNFLYKTEP-------CRNLRTWGHCKYGP 87
Query: 314 TCRFDH 319
C + H
Sbjct: 88 RCLYLH 93
>gi|300794488|ref|NP_001178120.1| zinc finger protein 36, C3H1 type-like 2 [Bos taurus]
Length = 485
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 314 TCRFDH 319
C F H
Sbjct: 207 RCHFIH 212
>gi|302687148|ref|XP_003033254.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
gi|300106948|gb|EFI98351.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
Length = 1239
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERI-------------------AQSAASNIGPL 289
P Q CR+++ GTC +G +C++ H E S+ S+ P
Sbjct: 197 PGQDVCRFWLK-GTCMHGKNCRYKHSNESRNVFDKSPAPRGNSTSRASPRGSSTSSPAPW 255
Query: 290 GL-PSRPGQAICSNYSMYGICKFGPTCRFDH 319
G S PG+ +C + + G CK+G +CR++H
Sbjct: 256 GSSASAPGRDVC-RFWLKGDCKYGNSCRYEH 285
>gi|296223994|ref|XP_002757880.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Callithrix jacchus]
Length = 857
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 521 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 572
Query: 314 TCRFDH 319
C F H
Sbjct: 573 RCHFIH 578
>gi|380026391|ref|XP_003696935.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Apis florea]
Length = 416
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N G C+ G +C++ H + I PS +C + + GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGIWNDGNNETIISSSAPSM--NTVCRFFKL-GICKFGN 66
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 369
C F H N + SI SS H + IS +I+ D +S WV+
Sbjct: 67 QCYFRHSTETVDNNL---VNANSIESSSPGQHTSNISTPTTIKNVKDNTSIAEEWVK 120
>gi|17539068|ref|NP_502949.1| Protein C35D6.4 [Caenorhabditis elegans]
gi|3874806|emb|CAB05147.1| Protein C35D6.4 [Caenorhabditis elegans]
Length = 203
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCK 111
C F+RR C YG C+F H + + Q + RN + C + TG CKYG C+
Sbjct: 94 CGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRN--HRNYKTVLCNNFSTTGHCKYGIRCQ 151
Query: 112 YHH 114
+ H
Sbjct: 152 FIH 154
>gi|432937814|ref|XP_004082483.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like, partial
[Oryzias latipes]
Length = 411
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 209 CRPFEENGSCKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 260
Query: 314 TCRFDH 319
C F H
Sbjct: 261 RCHFIH 266
>gi|340505388|gb|EGR31720.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY------- 306
CR++ N G C+ G+ C F H +E + + +N P+ +P+ + +C+NY
Sbjct: 42 CRHFKN-GNCQLGSACHFAHGQEELRNT--NNPTPINVPTSQPKVLCNNYKTVKCQYFQR 98
Query: 307 GICKFGPTCRFDHPYAGYPINYGLSLPPLSI 337
G CK C F P+ + G+S P S+
Sbjct: 99 GFCKNQQACSF--PHGDEEMMSGISSFPTSV 127
>gi|149050529|gb|EDM02702.1| zinc finger protein 36, C3H type-like 2 [Rattus norvegicus]
Length = 400
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 314 TCRFDH 319
C F H
Sbjct: 209 RCHFIH 214
>gi|417401900|gb|JAA47814.1| Putative zinc finger protein 36 c3h1 type-like 2 [Desmodus
rotundus]
Length = 496
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 162 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 213
Query: 314 TCRFDH 319
C F H
Sbjct: 214 RCHFIH 219
>gi|302805284|ref|XP_002984393.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
gi|300147781|gb|EFJ14443.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
Length = 624
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C ++ G+C+ G++C++ H + A SAA++ LP PG C N+ G C+ G
Sbjct: 343 CYDFITKGSCERGSECRYLHSSDENASSAAAD-NEQQLP--PGS--CFNFFKKGSCEKGD 397
Query: 314 TCRFDH 319
CRF H
Sbjct: 398 DCRFSH 403
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 33/177 (18%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
E WR D ++ V A C + G C G C+F H G
Sbjct: 290 EGQFWRYDTSDAKKTKRVEGA-----------CFDFVTKGSCARGDRCKFKHTF--ENGV 336
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+P+R+ C ++ G+C+ GS C+Y H D N + + N LP SC
Sbjct: 337 L----IPKRS----CYDFITKGSCERGSECRYLHSSDENASSAAADNEQQLP----PGSC 384
Query: 141 PYYMRTGSFLPSSGLQYAGSLPT-----WSLQRAPYLSSRL---QGTQSYMPLIVSP 189
+ + GS +++ SL W +P + + L G Y+ L P
Sbjct: 385 FNFFKKGSCEKGDDCRFSHSLERKQQECWFCLASPNVETHLVASVGDHCYVALAKGP 441
>gi|113931266|ref|NP_001039082.1| zinc finger protein 36, C3H type-like 2, gene 2 [Xenopus (Silurana)
tropicalis]
gi|89267207|emb|CAJ81408.1| zinc finger protein 36 C3H type like 2 [Xenopus (Silurana)
tropicalis]
Length = 279
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PVS + GLP R+
Sbjct: 103 RCLFIHSPQERREPPVSPDAPGLPTRR 129
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 309
CR + GTC YG C F H + + S P GLP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDAP-GLPTRRYAGPYREQCRLWRSPGGC 147
Query: 310 KFGPTCRFDHP 320
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 17/79 (21%)
Query: 46 ARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCK 105
A P C +R G C YG+ C F HP +RE C ++ G C
Sbjct: 131 AGPYREQCRLWRSPGGCPYGARCHFQHP------KGFREA---------CRHFAAHGDCP 175
Query: 106 YGSTCKYHH--PKDRNGAG 122
YG+ C + H P DR G+G
Sbjct: 176 YGARCHFSHSPPLDRWGSG 194
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 23/86 (26%)
Query: 238 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
+S + LP R P + CR + + G C YGA C F HPK G
Sbjct: 118 VSPDAPGLPTRRYAGPYREQCRLWRSPGGCPYGARCHFQHPK--------------GF-- 161
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDH 319
+ C +++ +G C +G C F H
Sbjct: 162 ---REACRHFAAHGDCPYGARCHFSH 184
>gi|74144555|dbj|BAE36112.1| unnamed protein product [Mus musculus]
Length = 568
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 245 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 296
Query: 314 TCRFDH 319
C F H
Sbjct: 297 RCHFIH 302
>gi|311252736|ref|XP_003125238.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Sus
scrofa]
Length = 493
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|268531842|ref|XP_002631049.1| C. briggsae CBR-MOE-3 protein [Caenorhabditis briggsae]
Length = 357
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ + TC + +C+F H ++ + S I P ++ +C Y+ G+C +G
Sbjct: 120 CQAWLESKTCNFAENCRFAHGEDELR---PSKIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 175
Query: 314 TCRFDHPYAG 323
C F HP G
Sbjct: 176 RCLFIHPDHG 185
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + C + NCRF H + ++ + C Y TG C YG C +
Sbjct: 120 CQAWLESKTCNFAENCRFAHGEDELRPSKIEPRQNNKYKTKLCDKYTTTGLCPYGKRCLF 179
Query: 113 HHP 115
HP
Sbjct: 180 IHP 182
>gi|393218484|gb|EJD03972.1| hypothetical protein FOMMEDRAFT_133331 [Fomitiporia mediterranea
MF3/22]
Length = 292
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 306
P+C +Y G C+ G +C + HPKE+ + +GP + C NY +
Sbjct: 119 PECWWYAKFGYCQAGDECLYAHPKEKKIECPDYKRGFCKLGPHCPRKHVRRVACQNY-LT 177
Query: 307 GICKFGPTCRFDHPYAGYP 325
G C GP C HP P
Sbjct: 178 GYCPLGPECTRGHPKPDLP 196
>gi|390604243|gb|EIN13634.1| hypothetical protein PUNSTDRAFT_117353 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 814
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YG C+F H +E + A + IC + + G C +G
Sbjct: 509 CRSWEEKGTCRYGTKCQFAHGEEELRVVARH--------PKYKTEICRTFWVSGSCPYGK 560
Query: 314 TCRFDH 319
C F H
Sbjct: 561 RCCFIH 566
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + G C YG+ C+F H A+ +Y+ E+ C + +G+C YG
Sbjct: 509 CRSWEEKGTCRYGTKCQFAHGEEELRVVARHPKYKTEI--------CRTFWVSGSCPYGK 560
Query: 109 TCKYHHPKDRNGAGP 123
C + H + G+ P
Sbjct: 561 RCCFIHTELPAGSAP 575
>gi|402890699|ref|XP_003908616.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Papio anubis]
gi|384949034|gb|AFI38122.1| zinc finger protein 36, C3H1 type-like 2 [Macaca mulatta]
gi|387542100|gb|AFJ71677.1| zinc finger protein 36, C3H1 type-like 2 [Macaca mulatta]
Length = 492
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|322799634|gb|EFZ20906.1| hypothetical protein SINV_11495 [Solenopsis invicta]
Length = 388
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G+CKYG C+F H + L + +C + G C +GP
Sbjct: 72 CRPYEENGSCKYGDKCQFAH--------GYGELRNLARHPKYKTELCRTFHTIGFCPYGP 123
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 124 RCHFIHNF 131
>gi|417411287|gb|JAA52088.1| Putative zinc finger protein 36 c3h1 type-like 2, partial [Desmodus
rotundus]
Length = 507
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 145 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 196
Query: 314 TCRFDH 319
C F H
Sbjct: 197 RCHFIH 202
>gi|351726504|ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycine max]
gi|255631776|gb|ACU16255.1| unknown [Glycine max]
Length = 127
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 239 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
S Q +P P++P C +++NTG C+YG CK+ HP
Sbjct: 41 SFKQQQIPPIPNRPLCFHFVNTGFCRYGDSCKYLHP 76
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
++++P +P C +++ TG C+YG +CKY HP N
Sbjct: 44 QQQIPPIPNRPLCFHFVNTGFCRYGDSCKYLHPVPNNNV 82
>gi|403213677|emb|CCK68179.1| hypothetical protein KNAG_0A05120 [Kazachstania naganishii CBS
8797]
Length = 290
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + +N ++P C+N+ G C +G
Sbjct: 180 CESFTTKGFCKYGNKCQFAHGLHELNFKTFTN----NFRTKP----CNNWQKLGYCPYGK 231
Query: 314 TCRFDH 319
CRF H
Sbjct: 232 RCRFKH 237
>gi|224012423|ref|XP_002294864.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969303|gb|EED87644.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 810
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
Query: 30 HDNQEGGGVAQASPYPARPGEPD--------CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ 81
+D+ GG + + S G P C + G C + NC F H + +
Sbjct: 199 YDSSNGGAMYRYSSPTKMSGSPANTKLKTEMCRNILKIGYCQFKENCHFAHSKEELRKFE 258
Query: 82 YREELPERNGQPD--------CGYYLKTGTCKYGSTCKYHHP 115
EE+ E D C + + TG+C YG+ CK HP
Sbjct: 259 TVEEMHEAGLITDPKNYMARPCFFGVSTGSCPYGARCKSLHP 300
>gi|19113245|ref|NP_596453.1| zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|1731429|sp|P47979.1|ZFS1_SCHPO RecName: Full=Zinc finger protein zfs1; AltName: Full=Multicopy
suppressor of overexpressed cyr1 protein 4
gi|755103|dbj|BAA08654.1| zinc-finger protein [Schizosaccharomyces pombe]
gi|7106064|emb|CAB75997.1| CCCH tandem zinc finger protein, human Tristetraprolin homolog
Zfs1, involved in mRNA catabolism [Schizosaccharomyces
pombe]
Length = 404
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + +GTC+YG+ C+F H + + + P P + C ++ MYG C +G
Sbjct: 332 CKNWQISGTCRYGSKCQFAHGNQELKE-------PPRHPKYKSER-CRSFMMYGYCPYGL 383
Query: 314 TCRFDH 319
C F H
Sbjct: 384 RCCFLH 389
>gi|410906761|ref|XP_003966860.1| PREDICTED: uncharacterized protein LOC101079369 [Takifugu rubripes]
Length = 317
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 254 CRYYMNTGTCKYGADCKF-HHPKE-RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 311
CR Y TG C YG+ C F H+P E R A NI P + CS +GIC F
Sbjct: 106 CRSYHTTGYCYYGSRCLFVHNPSEQRHAHRRRRNI--------PCRTFCS----FGICPF 153
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 154 GTRCNFLH 161
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAA----QGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C YG C+F H + +Y+ EL C Y TG C YGS
Sbjct: 68 CTSYSATGFCKYGERCQFAHGLHELHIPFHHPKYKTEL--------CRSYHTTGYCYYGS 119
Query: 109 TCKY-HHPKDRNGAGPVSFNI 128
C + H+P ++ A NI
Sbjct: 120 RCLFVHNPSEQRHAHRRRRNI 140
>gi|402594222|gb|EJW88148.1| hypothetical protein WUBG_00943 [Wuchereria bancrofti]
Length = 394
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + +TG C YG C+F H + + AA P + +C+ +++YG+C +G
Sbjct: 166 CNAFRDTGQCAYGFHCRFAHGIDEL--RAAPGPHP-----KYKTRLCNKFTLYGLCPYGS 218
Query: 314 TCRFDH 319
C+F H
Sbjct: 219 HCQFIH 224
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA-----QYREELPERNGQPDCGYYLKTGTCKYG 107
C +R TG C YG +CRF H + A +Y+ L C + G C YG
Sbjct: 166 CNAFRDTGQCAYGFHCRFAHGIDELRAAPGPHPKYKTRL--------CNKFTLYGLCPYG 217
Query: 108 STCKYHH 114
S C++ H
Sbjct: 218 SHCQFIH 224
>gi|225713900|gb|ACO12796.1| RING finger protein unkempt [Lepeophtheirus salmonis]
Length = 469
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKER------IAQSAASNIG---PLGLPSRPGQAICSNYS 304
CR M+ C+YG+ C+F H + ++ +A N L + +CSNY+
Sbjct: 220 CRKIMSKEMCEYGSKCRFAHSESELRKPLNVSMNAPHNTNYHNSLAFKT----VLCSNYT 275
Query: 305 MYGICKFGPTCRFDH 319
G CK+G C+F H
Sbjct: 276 ETGQCKYGDNCQFAH 290
>gi|395829566|ref|XP_003787923.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Otolemur
garnettii]
Length = 495
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 314 TCRFDH 319
C F H
Sbjct: 213 RCHFIH 218
>gi|49249965|ref|NP_001001806.1| zinc finger protein 36, C3H1 type-like 2 [Mus musculus]
gi|223460781|gb|AAI39417.1| Zinc finger protein 36, C3H type-like 2 [Mus musculus]
Length = 484
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 314 TCRFDH 319
C F H
Sbjct: 213 RCHFIH 218
>gi|74218063|dbj|BAE42014.1| unnamed protein product [Mus musculus]
Length = 484
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 314 TCRFDH 319
C F H
Sbjct: 213 RCHFIH 218
>gi|167535049|ref|XP_001749199.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772352|gb|EDQ86005.1| predicted protein [Monosiga brevicollis MX1]
Length = 468
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPK 275
+P C++++ TGTC+YG DC F HP+
Sbjct: 89 KPQCKHWLRTGTCRYGTDCFFLHPE 113
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPK 116
+P C ++L+TGTC+YG+ C + HP+
Sbjct: 89 KPQCKHWLRTGTCRYGTDCFFLHPE 113
>gi|114577167|ref|XP_515435.2| PREDICTED: zinc finger protein 36, C3H type-like 2 [Pan
troglodytes]
gi|410267656|gb|JAA21794.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
gi|410267658|gb|JAA21795.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
Length = 491
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|296482648|tpg|DAA24763.1| TPA: zinc finger protein 36, C3H type-like 2 [Bos taurus]
Length = 486
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 314 TCRFDH 319
C F H
Sbjct: 207 RCHFIH 212
>gi|62857339|ref|NP_001016822.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89273981|emb|CAJ81284.1| zinc finger protein 36 C3H type like 2 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 238 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
+S + LP R P + CR + + G C YGA C F HPK
Sbjct: 118 VSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKS----------------- 160
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDH 319
+ +C +++ G C +G C F H
Sbjct: 161 --SREVCRHFAALGDCPYGARCHFSH 184
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 22/84 (26%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
A PY R C +R G C YG+ C F HP ++ + C ++
Sbjct: 131 AGPYRER-----CRLWRSPGGCPYGARCHFQHP---------------KSSREVCRHFAA 170
Query: 101 TGTCKYGSTCKYHH--PKDRNGAG 122
G C YG+ C + H P DR G+G
Sbjct: 171 LGDCPYGARCHFSHSPPLDRWGSG 194
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 309
CR + GTC YG C F H + +S S P LP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAP-RLPTRKYAGPYRERCRLWRSPGGC 147
Query: 310 KFGPTCRFDHP 320
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PVS + LP R+
Sbjct: 103 RCLFIHSPQERRESPVSPDAPRLPTRK 129
>gi|410351521|gb|JAA42364.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
gi|410351523|gb|JAA42365.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
Length = 491
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|17562800|ref|NP_505172.1| Protein POS-1 [Caenorhabditis elegans]
gi|3767590|dbj|BAA33854.1| cytoplasmic zinc-finger protein [Caenorhabditis elegans]
gi|373254396|emb|CCD70802.1| Protein POS-1 [Caenorhabditis elegans]
Length = 264
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 305
C Y + C YG C+F H + L LP P +C +SM
Sbjct: 104 CDAYKRSQACSYGDQCRFAH-----------GVHELRLPMNPRGRNHPKYKTVLCDKFSM 152
Query: 306 YGICKFGPTCRFDH 319
G CK+G C+F H
Sbjct: 153 TGNCKYGTRCQFIH 166
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-PERNGQPD-----CGYYLKTGTCKY 106
C Y+R+ C YG CRF H + + R + P P C + TG CKY
Sbjct: 104 CDAYKRSQACSYGDQCRFAHGVH-----ELRLPMNPRGRNHPKYKTVLCDKFSMTGNCKY 158
Query: 107 GSTCKY-HHPKDRNGAGPVS 125
G+ C++ H D N A S
Sbjct: 159 GTRCQFIHKIVDGNAAKLAS 178
>gi|60652785|gb|AAX29087.1| zinc finger protein 36 C3H type-like 2 [synthetic construct]
Length = 498
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|397475530|ref|XP_003809188.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2, partial [Pan paniscus]
Length = 475
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 289 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 340
Query: 314 TCRFDH 319
C F H
Sbjct: 341 RCHFIH 346
>gi|395526014|ref|XP_003765170.1| PREDICTED: tristetraprolin [Sarcophilus harrisii]
Length = 291
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YGS C+F H A++ +Y+ EL C +L G C YG+
Sbjct: 51 CRTFSESGKCRYGSKCQFTHGLEELRPASRHPKYKTEL--------CRKFLLLGACPYGT 102
Query: 109 TCKY-HHPKDRNGAG 122
C + H P D AG
Sbjct: 103 RCHFIHTPYDVLSAG 117
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YG+ C+F H E + P + +C + + G C +G
Sbjct: 51 CRTFSESGKCRYGSKCQFTHGLE--------ELRPASRHPKYKTELCRKFLLLGACPYGT 102
Query: 314 TCRFDH-PYAGYPINYGLSLPPL 335
C F H PY ++ G + PPL
Sbjct: 103 RCHFIHTPYDV--LSAGSAHPPL 123
>gi|313228137|emb|CBY23287.1| unnamed protein product [Oikopleura dioica]
Length = 404
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y TG C+YG C+F H + + L + +C ++ G C +G
Sbjct: 138 CRSYEETGNCRYGKKCQFAH--------SVKEVRVLNRHPKYKTEMCKSFHTNGYCPYGA 189
Query: 314 TCRFDH 319
C F H
Sbjct: 190 RCHFVH 195
>gi|66801291|ref|XP_629571.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74850928|sp|Q54CU9.1|DUS3L_DICDI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|60462949|gb|EAL61146.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 671
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 27/104 (25%)
Query: 262 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 321
C++ CKF H E+ S +IG IC N+ YG CK+G C F +
Sbjct: 113 VCEFNETCKFSHDVEKYLASKPKSIG-----------ICQNFQTYGECKYGLNCYFGECH 161
Query: 322 AGYPINYGLSLPPLSILDS-SLMNHQAISATHSIETSPDASSKI 364
I+D+ +++N + I ++T + S++I
Sbjct: 162 ---------------IVDNKTIVNKELIGKVEPVKTLNEVSNEI 190
>gi|409044771|gb|EKM54252.1| hypothetical protein PHACADRAFT_174761 [Phanerochaete carnosa
HHB-10118-sp]
Length = 2312
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL---------GLPSRPGQAICSNYS 304
CR+++ G C+YG+ C F H + + + + P+ PG+ C+ Y
Sbjct: 6 CRFHLKPGGCRYGSSCTFAHIEGATSATGGNTTDAATPGSSSTFESSPAPPGK--CTFYW 63
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLS-----ILDSSLMNHQAISATHSIETSPD 359
G CK G CRF H P++ S P ++ + D+ L I + ET D
Sbjct: 64 KTGDCKRGFQCRFKH---DRPVDPSTSTPEVTTTRANVTDALLPFLTPIGISRLFETGSD 120
Query: 360 A 360
A
Sbjct: 121 A 121
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELP-------ERNGQP--DCGYYLKT 101
C F+ + G C YGS+C F H A +A G + E + P C +Y KT
Sbjct: 6 CRFHLKPGGCRYGSSCTFAHIEGATSATGGNTTDAATPGSSSTFESSPAPPGKCTFYWKT 65
Query: 102 GTCKYGSTCKYHHPK 116
G CK G C++ H +
Sbjct: 66 GDCKRGFQCRFKHDR 80
>gi|41054479|ref|NP_955943.1| zinc finger protein 36, C3H type-like 1b [Danio rerio]
gi|39645454|gb|AAH63991.1| Zinc finger protein 36, C3H type-like 1 like [Danio rerio]
Length = 348
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 44/234 (18%)
Query: 3 DNRQVKSNAVANQSADNIEEAIWRLKIHDNQE-------------GGGVAQASPYPARPG 49
+N ++ ++A N S++N E +N E G G +S Y
Sbjct: 84 NNLKMDNSASINGSSNNKENRFRDRSFSENGERLRPSSITCISANGNGQVNSSRYKTELC 143
Query: 50 EPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCK 105
P + G C YG C+F H + + +Y+ EL C + G C
Sbjct: 144 RP----FEENGTCKYGDKCQFAHGMHELRSLNRHPKYKTEL--------CRTFHSIGYCP 191
Query: 106 YGSTCKY-HHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPT 163
YG C + H+ ++R G P+ SFN + P S + PSSG + PT
Sbjct: 192 YGPRCHFIHNAEERRGPPPLSSFNKMERPRLHHSFSFAGF-------PSSG--GSQDSPT 242
Query: 164 WSLQRAPYLSSRLQGTQSYMPLIVSPSQ---GIVPAPGWNTYMGNIGPLSPTSI 214
S+ P S+ S P S + VP+ G T GP SPTS
Sbjct: 243 -SVTPPPLFSAEDLNEWSSNPFAFSSQELANLFVPSLGGTTIPDLPGPHSPTSF 295
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTCKYG C+F H + L + +C + G C +GP
Sbjct: 143 CRPFEENGTCKYGDKCQFAH--------GMHELRSLNRHPKYKTELCRTFHSIGYCPYGP 194
Query: 314 TCRFDH 319
C F H
Sbjct: 195 RCHFIH 200
>gi|15812178|ref|NP_008818.3| zinc finger protein 36, C3H1 type-like 2 [Homo sapiens]
gi|146291085|sp|P47974.3|TISD_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 2;
Short=ZFP36-like 2; AltName: Full=Butyrate response
factor 2; AltName: Full=EGF-response factor 2;
Short=ERF-2; AltName: Full=Protein TIS11D
gi|62822444|gb|AAY14992.1| unknown [Homo sapiens]
gi|119620711|gb|EAX00306.1| zinc finger protein 36, C3H type-like 2, isoform CRA_b [Homo
sapiens]
Length = 494
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|13477111|gb|AAH05010.1| ZFP36L2 protein [Homo sapiens]
gi|123993447|gb|ABM84325.1| zinc finger protein 36, C3H type-like 2 [synthetic construct]
gi|124000545|gb|ABM87781.1| zinc finger protein 36, C3H type-like 2 [synthetic construct]
Length = 497
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|509778|emb|CAA55592.1| ERF-2 [Homo sapiens]
Length = 492
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|348510817|ref|XP_003442941.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 372
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 149 CRPFEENGSCKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 200
Query: 314 TCRFDH 319
C F H
Sbjct: 201 RCHFIH 206
>gi|170585736|ref|XP_001897638.1| Zinc finger C-x8-C-x5-C-x3-H type containing protein [Brugia
malayi]
gi|158594945|gb|EDP33522.1| Zinc finger C-x8-C-x5-C-x3-H type containing protein, putative
[Brugia malayi]
Length = 355
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 37/122 (30%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N C+ GA C F H + S+P + Y + G C FG
Sbjct: 23 CRYFAN-NICREGASCPFSHDRN----------------SKPDRT--CRYYLIGKCDFGT 63
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 373
+CR+DH PPL + +A+ + SP+A+ + N NS+
Sbjct: 64 SCRYDH-----------KRPPLDGV-------KAVKSVARTTGSPNATKVVENGCSNSEG 105
Query: 374 VS 375
V+
Sbjct: 106 VT 107
>gi|47212350|emb|CAF93268.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR + TGTCKYG+ C+F H + + GL P C + +G C +
Sbjct: 143 CRGFQETGTCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 192
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 193 GSRCHFIH 200
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ TG C YGS C+F H +G YR P+ +P C + G C YGS C +
Sbjct: 143 CRGFQETGTCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CRTFYNFGYCPYGSRCHF 198
Query: 113 HH 114
H
Sbjct: 199 IH 200
>gi|242056885|ref|XP_002457588.1| hypothetical protein SORBIDRAFT_03g009880 [Sorghum bicolor]
gi|241929563|gb|EES02708.1| hypothetical protein SORBIDRAFT_03g009880 [Sorghum bicolor]
Length = 986
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 21/125 (16%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G C+F+ G C G+ CRF+H + A + P C +YL C+ G+
Sbjct: 704 GTEACVFFA-NGSCNLGAACRFSHSSLAPK--------------PVCKFYLTLQGCRSGN 748
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSLQR 168
+C Y H + PV+ I R C LP+ G Y + +L+
Sbjct: 749 SCPYSHDFGSKVSAPVTSGICSQEGRATSLCCT------RLLPADGDGYILVMNDKTLEF 802
Query: 169 APYLS 173
+ LS
Sbjct: 803 SSKLS 807
>gi|402471238|gb|EJW05085.1| hypothetical protein EDEG_00798 [Edhazardia aedis USNM 41457]
Length = 293
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +TG CKYG C+F H K + ++ AIC ++ + C +G
Sbjct: 52 CRNYEDTGFCKYGDKCQFAHNKNELRYKTRHHLYKT--------AICRSFWVNNYCPYGK 103
Query: 314 TCRFDH 319
C F H
Sbjct: 104 RCCFIH 109
>gi|147904354|ref|NP_001080610.1| zinc finger protein 36, C3H1 type-like 2-A [Xenopus laevis]
gi|82176684|sp|Q7ZXW9.1|TISDA_XENLA RecName: Full=Zinc finger protein 36, C3H1 type-like 2-A; AltName:
Full=CCCH zinc finger protein 3; Short=XC3H-3
gi|28278580|gb|AAH44086.1| Zfp36l2-prov protein [Xenopus laevis]
Length = 363
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 137 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 188
Query: 314 TCRFDH 319
C F H
Sbjct: 189 RCHFIH 194
>gi|355778689|gb|EHH63725.1| hypothetical protein EGM_16749 [Macaca fascicularis]
Length = 338
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 299
S Q P R CR + G CKYG C+F H + L + +
Sbjct: 106 GSGQGNPSRYKTELCRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTEL 157
Query: 300 CSNYSMYGICKFGPTCRFDH 319
C + G C +GP C F H
Sbjct: 158 CRTFHTIGFCPYGPRCHFIH 177
>gi|79750234|ref|NP_001031703.1| butyrate response factor 2 [Rattus norvegicus]
Length = 482
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 314 TCRFDH 319
C F H
Sbjct: 209 RCHFIH 214
>gi|449297565|gb|EMC93583.1| hypothetical protein BAUCODRAFT_133464 [Baudoinia compniacensis
UAMH 10762]
Length = 421
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Query: 24 IWRLKIHDNQEGGGV-AQASPYPARPG--EPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
I + H + G + A A PARP P C + + G C YG CRF H
Sbjct: 192 IAGVDFHRTKNGNLIRASALADPARPAPLRPQCENFTKHGTCPYGPICRFTH-------- 243
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ N C +LK GTC G +C H
Sbjct: 244 -------DPNKVAICKDFLKAGTCALGDSCDMSH 270
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 27/97 (27%)
Query: 231 AGAQMH------ILSASSQNLPERPD--QPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 282
AG H ++ AS+ P RP +P C + GTC YG C+F H ++
Sbjct: 193 AGVDFHRTKNGNLIRASALADPARPAPLRPQCENFTKHGTCPYGPICRFTHDPNKV---- 248
Query: 283 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
AIC ++ G C G +C H
Sbjct: 249 ---------------AICKDFLKAGTCALGDSCDMSH 270
>gi|327272280|ref|XP_003220913.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Anolis
carolinensis]
Length = 486
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 13/61 (21%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G NCR++H Y +Q A C Y+ + G C YG C+Y H
Sbjct: 68 YFMHGVCKEGDNCRYSHDLYTSQSAMV------------CRYFQR-GCCAYGDRCRYEHT 114
Query: 116 K 116
K
Sbjct: 115 K 115
>gi|426335364|ref|XP_004029195.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Gorilla
gorilla gorilla]
Length = 464
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|984509|gb|AAA91778.1| Tis11d [Homo sapiens]
Length = 482
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|392349170|ref|XP_003750309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Rattus
norvegicus]
Length = 482
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 314 TCRFDH 319
C F H
Sbjct: 209 RCHFIH 214
>gi|46015500|pdb|1RGO|A Chain A, Structural Basis For Recognition Of The Mrna Class Ii Au-
Rich Element By The Tandem Zinc Finger Domain Of Tis11d
Length = 70
Score = 41.2 bits (95), Expect = 1.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 9 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 60
Query: 314 TCRFDH 319
C F H
Sbjct: 61 RCHFIH 66
>gi|350041023|dbj|GAA38838.1| tristetraprolin [Clonorchis sinensis]
Length = 255
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH----PAYAAQGAQY 82
+++H Q Q + Y AR CL Y++ C G NC F H + +Y
Sbjct: 160 MQVHKRQHMPR-KQDAIYNARYKTQPCLHYQKHKRCPLGENCHFAHGPEELLHPQSHPKY 218
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R + C +L TGTC +G C + HP
Sbjct: 219 RTRM--------CMNFLYTGTCPFGKKCYFVHP 243
>gi|424512981|emb|CCO66565.1| predicted protein [Bathycoccus prasinos]
Length = 524
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ TG C+Y C+F H ++ + P Q +C Y+ G C +G
Sbjct: 332 CRSWIETGECRYNDKCQFAHGRDELRCVVRH-------PKYKTQ-VCRTYTTTGQCPYGN 383
Query: 314 TCRFDH 319
CRF H
Sbjct: 384 RCRFIH 389
>gi|135865|sp|P23949.1|TISD_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 2;
Short=ZFP36-like 2; AltName: Full=Butyrate response
factor 2; AltName: Full=Protein TIS11D
gi|202067|gb|AAA72946.1| TIS11 primary response gene [Mus musculus]
Length = 367
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 183
Query: 314 TCRFDH 319
C F H
Sbjct: 184 RCHFIH 189
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL R + IC NY
Sbjct: 98 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY- 155
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 156 LVGFCPEGPSCKFMHPRFELPM 177
>gi|332227305|ref|XP_003262835.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Nomascus
leucogenys]
Length = 500
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H + + + + L + +C + G C +GP
Sbjct: 159 CRPFEESGMCKYGEKCQFAHGFHEL--RSLTRLQNLTRHPKYKTELCRTFHTIGFCPYGP 216
Query: 314 TCRFDH 319
C F H
Sbjct: 217 RCHFIH 222
>gi|148706626|gb|EDL38573.1| mCG15594 [Mus musculus]
Length = 334
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 137 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 188
Query: 314 TCRFDH 319
C F H
Sbjct: 189 RCHFIH 194
>gi|145344880|ref|XP_001416952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577178|gb|ABO95245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G+C+YGA C+F H ++ + P+ + +C ++ G C +G
Sbjct: 15 CRSWEESGSCRYGAKCQFAHGRD--------ELRPVLRHPKYKTEVCRTFAAQGNCPYGS 66
Query: 314 TCRFDH 319
CRF H
Sbjct: 67 RCRFIH 72
>gi|336365876|gb|EGN94225.1| hypothetical protein SERLA73DRAFT_78143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378558|gb|EGO19716.1| hypothetical protein SERLADRAFT_453661 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 306
P+C ++ G C G +C + HPKER + +GP P + + + +
Sbjct: 121 PECWWFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPT-CPRKHVRRVACQLYLT 179
Query: 307 GICKFGPTCRFDHPYAGYP 325
GIC GP C HP P
Sbjct: 180 GICPLGPDCPRGHPKPDLP 198
>gi|95769571|gb|ABF57445.1| butyrate response factor 2 [Bos taurus]
Length = 318
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 314 TCRFDH 319
C F H
Sbjct: 207 RCHFIH 212
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL R + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|328771087|gb|EGF81127.1| hypothetical protein BATDEDRAFT_10653 [Batrachochytrium
dendrobatidis JAM81]
Length = 624
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + C G++CK+ H + ++GP +C +++ G CKFG
Sbjct: 112 CNKFATGEQCNLGSNCKYSHDIQAYLAEKELDLGP----------VCPQFALLGECKFGI 161
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQ--NS 371
CRF + N ++ L+ D + N S I+ ++ ++Q ++
Sbjct: 162 KCRFSKAHTDAEGNQMVAEKKLN-EDQFIKNCSTKSIIQDIKQKNIDCTRSKEFIQWWSA 220
Query: 372 DAVSVQHQNPDMKN 385
+ + +Q + ++K
Sbjct: 221 EEIKLQQRLNELKK 234
>gi|395731886|ref|XP_003775975.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2-like [Pongo abelii]
Length = 489
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|354546718|emb|CCE43450.1| hypothetical protein CPAR2_210940 [Candida parapsilosis]
Length = 220
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLG----LPSRPGQAICSNYSM 305
P+C +Y G C G++C + H P+ +I + N G SR + Y M
Sbjct: 97 PECLFYSKNGYCTQGSECLYQHIDPQSKIPECMNYNAGFCAEGPNCKSRHVRRTICPYYM 156
Query: 306 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDA--SSK 363
G C GP C HP Y N L + P I +A A S E D S+
Sbjct: 157 AGFCPQGPECEHTHPKFDYH-NLYLRIKPDPI--------RATQAESSGEEEKDGVMVSQ 207
Query: 364 IPNWVQNSDAVSV 376
I S+A+SV
Sbjct: 208 IEGNASESNAISV 220
>gi|348508156|ref|XP_003441621.1| PREDICTED: hypothetical protein LOC100704231 [Oreochromis
niloticus]
Length = 404
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ TG C YGS C+F H +G YR P+ +P C + G C YGS C +
Sbjct: 141 CRGFQETGSCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CRTFYNFGYCPYGSRCHF 196
Query: 113 HHPKDRNGA 121
H + + A
Sbjct: 197 IHEEKISDA 205
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR + TG+CKYG+ C+F H + + GL P C + +G C +
Sbjct: 141 CRGFQETGSCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 190
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 191 GSRCHFIH 198
>gi|118382894|ref|XP_001024603.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila]
gi|89306370|gb|EAS04358.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila
SB210]
Length = 383
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 218 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMNTGTCKYGADC 269
NL+ +N Q + + NL + P+Q + C+ +M G C YG C
Sbjct: 181 NLVQKKKNSFGSSNMNQQPLQQSQLNNLTQGPNQQETSKFKTEMCKNWMEFGKCNYGKKC 240
Query: 270 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
+F H K + + N + +C+++ C +G C F H
Sbjct: 241 QFAHGKNELVDKSTVN------KRQYKSKLCNSFHTQKFCPYGNRCMFIHE 285
>gi|403414935|emb|CCM01635.1| predicted protein [Fibroporia radiculosa]
Length = 2146
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+Y A C+F H +E + + + + IC + + G C +G
Sbjct: 1842 CRSWEEKGTCRYSAKCQFAHGEEELRKVSRH--------PKYKTEICRTFWVSGSCPYGK 1893
Query: 314 TCRFDH 319
C F H
Sbjct: 1894 RCCFIH 1899
>gi|195478028|ref|XP_002100381.1| GE17025 [Drosophila yakuba]
gi|194187905|gb|EDX01489.1| GE17025 [Drosophila yakuba]
Length = 448
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 21/112 (18%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 267
S+L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 110 SSLVTITENLGNMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 165
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
C+F H + + + + C + G C +GP C F H
Sbjct: 166 KCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 209
>gi|302782087|ref|XP_002972817.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
gi|300159418|gb|EFJ26038.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
Length = 568
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 25/128 (19%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
E WR D ++ V A C + G C G C+F H A +
Sbjct: 234 EGQFWRYDTSDAKKTKRVEGA-----------CFDFVTKGSCARGDRCKFKH---AFENG 279
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+P+R+ C ++ G+C+ GS C+Y H D N + + N LP SC
Sbjct: 280 VL---IPKRS----CYDFITKGSCERGSECRYLHSSDENASSTAADNEQQLP----PGSC 328
Query: 141 PYYMRTGS 148
+ + GS
Sbjct: 329 FNFFKKGS 336
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C ++ G+C+ G++C++ H + A S A++ LP PG C N+ G C+ G
Sbjct: 287 CYDFITKGSCERGSECRYLHSSDENASSTAAD-NEQQLP--PGS--CFNFFKKGSCEKGD 341
Query: 314 TCRFDH 319
CRF H
Sbjct: 342 DCRFSH 347
>gi|357624170|gb|EHJ75049.1| hypothetical protein KGM_19145 [Danaus plexippus]
Length = 265
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 112 CRPFEEAGVCKYGDKCQFAH--------GVRELRNLQRHPKYKTELCRTFHSVGFCPYGP 163
Query: 314 TCRFDH 319
C F H
Sbjct: 164 RCHFVH 169
>gi|17570419|ref|NP_510397.1| Protein Y60A9.3 [Caenorhabditis elegans]
gi|6425437|emb|CAB60410.1| Protein Y60A9.3 [Caenorhabditis elegans]
Length = 203
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCKYH 113
F+RR C YG C+F H + + Q + RN + C + TG CKYG C++
Sbjct: 96 FHRRGQKCAYGEKCKFAHSVHELRFPQTKRN--HRNYKTVLCNKFSTTGHCKYGIRCQFI 153
Query: 114 H 114
H
Sbjct: 154 H 154
>gi|356574074|ref|XP_003555177.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 160
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 221 YSSRNQGDLGAGAQMHIL-------------SASSQNLPERPDQPDCRYYMNTGTCKYGA 267
Y + D A + H+L S Q +P P++ C +++NTG C+YG
Sbjct: 7 YCEKQFQDTAADRKRHVLGIQQQQAKARWYDSFKQQQIPPVPNRSLCFHFVNTGFCRYGD 66
Query: 268 DCKFHHP 274
CK+ HP
Sbjct: 67 SCKYLHP 73
>gi|170086856|ref|XP_001874651.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649851|gb|EDR14092.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1419
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE----------RNGQPDCGYYLKT 101
+CLF+ G C G+ C F H EE+ E + Q C ++ K
Sbjct: 442 ECLFFS-LGKCRNGTACPFQHVPSKEPATSQPEEVDEGWDGPQSSSRQRSQKRCNHFAKR 500
Query: 102 GTCKYGSTCKYHH 114
G C YGS+C Y H
Sbjct: 501 GVCPYGSSCNYSH 513
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQ--SAASNIGPLGLPSRPGQAI---CSNYSMY 306
P+C +Y G C G +C + HPKER A PLG A C NY +
Sbjct: 145 PECWWYAKYGYCSAGDECLYTHPKERKIDCPDYARGFCPLGPKCERKHARRVPCQNY-LS 203
Query: 307 GICKFGPTCRFDHPYAGYP 325
G C G C HP P
Sbjct: 204 GFCPLGKECALAHPKWELP 222
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 42/111 (37%), Gaps = 18/111 (16%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G +C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 125 GLCKKGESCEFLHEYNLRK-------------MPECWWYAKYGYCSAGDECLYTHPKERK 171
Query: 120 GAGP---VSFNILGLPM-RQDEKSCPYYMRTGSFLPSSGLQYAGSLPTWSL 166
P F LG R+ + P F P G + A + P W L
Sbjct: 172 IDCPDYARGFCPLGPKCERKHARRVPCQNYLSGFCP-LGKECALAHPKWEL 221
>gi|118404606|ref|NP_001072758.1| ZFP36 ring finger protein-like 1 [Xenopus (Silurana) tropicalis]
gi|116487406|gb|AAI25787.1| hypothetical protein MGC147385 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 314 TCRFDH 319
C F H
Sbjct: 173 RCHFIH 178
>gi|63054460|ref|NP_588409.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|48474269|sp|O74463.2|YQC1_SCHPO RecName: Full=Uncharacterized protein C1739.01
gi|157310530|emb|CAA20774.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe]
Length = 547
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 20/70 (28%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+++ N GTC G +C F H E RP IC Y + G CKFGP
Sbjct: 47 CKFFRN-GTCTAGENCPFSHSLET---------------ERP---IC-KYFLKGNCKFGP 86
Query: 314 TCRFDHPYAG 323
C H G
Sbjct: 87 KCALSHALPG 96
>gi|405118334|gb|AFR93108.1| no arches protein [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 306
P+C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 307 GICKFGPTCRFDHPYAGYP 325
G C G C+ HP P
Sbjct: 184 GFCPDGKDCKLAHPSPNRP 202
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 17/81 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P+C +++K G C+ G C Y
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDFNLRT-------------MPECIWFVKQGKCELGGECLY 144
Query: 113 HHPKDRNGAGP---VSFNILG 130
HP+DR P F +LG
Sbjct: 145 FHPRDRRVECPDYNRGFCVLG 165
>gi|302830796|ref|XP_002946964.1| CCCH-type zinc finger protein [Volvox carteri f. nagariensis]
gi|300268008|gb|EFJ52190.1| CCCH-type zinc finger protein [Volvox carteri f. nagariensis]
Length = 118
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 254 CRYYMNTGTCKYGADCK--FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 311
CR + TG+C+YG+ C+ F H E + P+ + C ++ GIC++
Sbjct: 5 CRSWTETGSCRYGSKCQASFAHGPEELR--------PVVRHPKYKTEHCRTFAATGICQY 56
Query: 312 GPTCRFDHPYA 322
G CRF H A
Sbjct: 57 GNRCRFIHAAA 67
>gi|162287133|ref|NP_001089645.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|71681229|gb|AAI00163.1| MGC114600 protein [Xenopus laevis]
Length = 345
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 314 TCRFDH 319
C F H
Sbjct: 173 RCHFIH 178
>gi|325188682|emb|CCA23213.1| tRNAdihydrouridine synthase 3 putative [Albugo laibachii Nc14]
Length = 637
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 306
E P CR+ + C+YG CKF H + + +I P C + +
Sbjct: 58 EDPSDVLCRFLAVSKPCEYGERCKFSHEIKDFMKRKPKDIHPY----------CPIFESF 107
Query: 307 GICKFGPTCRF 317
G C++G CRF
Sbjct: 108 GECEYGLKCRF 118
>gi|223649192|gb|ACN11354.1| Butyrate response factor 1 [Salmo salar]
Length = 400
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHH---PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
CR Y +GTCKYGA C+F H + +++ P C + G C
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGTDEQRDLSRHPKYKTEP-----------CRTFHTIGFCP 210
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 211 YGARCHFIH 219
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL---PERNGQPD 94
+A + P R C Y +G C YG+ C+F H G + +L P+ +P
Sbjct: 147 LAPSPPISTRYKTEMCRTYEESGTCKYGAKCQFAH------GTDEQRDLSRHPKYKTEP- 199
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDR----NGAGPVSFNILGLPMRQDEKSCPYYMR 145
C + G C YG+ C + H D +G P P RQ + P +R
Sbjct: 200 CRTFHTIGFCPYGARCHFIHNADEQLGPDGGAP--------PQRQKMRERPQLLR 246
>gi|50286627|ref|XP_445742.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525048|emb|CAG58661.1| unnamed protein product [Candida glabrata]
Length = 453
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + + SN ++P C N+ G C +G
Sbjct: 345 CETFTTKGFCKYGNKCQFAHGLQELKLKKTSN----NFRTKP----CINWDKLGYCPYGK 396
Query: 314 TCRFDH 319
C F H
Sbjct: 397 RCCFKH 402
>gi|334328570|ref|XP_001368672.2| PREDICTED: tristetraprolin-like [Monodelphis domestica]
Length = 400
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAY---AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YGS C+F H P A++ +Y+ EL C L G+C YGS
Sbjct: 164 CRTFSESGKCRYGSKCQFAHGPGELRPASRHPKYKTEL--------CRKLLILGSCPYGS 215
Query: 109 TCKY-HHPKD 117
C + H+P D
Sbjct: 216 RCHFIHYPSD 225
>gi|301116960|ref|XP_002906208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107557|gb|EEY65609.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 250
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YGS C+F H +G + C +L TG C YGS C++
Sbjct: 48 CKHFTENGSCRYGSKCQFAHGEEELRGVLRHPKYKTTR----CKAFLSTGKCMYGSRCRF 103
Query: 113 HHPK 116
H +
Sbjct: 104 IHTR 107
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+++ G+C+YG+ C+F H +E + G L P + C + G C +G
Sbjct: 48 CKHFTENGSCRYGSKCQFAHGEEELR-------GVLRHP-KYKTTRCKAFLSTGKCMYGS 99
Query: 314 TCRFDH 319
CRF H
Sbjct: 100 RCRFIH 105
>gi|389751127|gb|EIM92200.1| hypothetical protein STEHIDRAFT_47086 [Stereum hirsutum FP-91666
SS1]
Length = 296
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C +Y G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPKCPRKHIRRVACQLYLTG 180
Query: 308 ICKFGPTCRFDHPYAGYP 325
C GP C HP P
Sbjct: 181 FCPLGPDCPRGHPKPNIP 198
>gi|321252264|ref|XP_003192345.1| essential RNA-binding component of cleavage and polyadenylation
factor; Yth1p [Cryptococcus gattii WM276]
gi|317458813|gb|ADV20558.1| Essential RNA-binding component of cleavage and polyadenylation
factor, putative; Yth1p [Cryptococcus gattii WM276]
Length = 332
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 306
P+C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRMCEAYAA- 183
Query: 307 GICKFGPTCRFDHPYAGYP 325
G C G C+ HP P
Sbjct: 184 GFCPDGRDCKLAHPSPNRP 202
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 17/81 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P+C +++K G C+ G C Y
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDF-------------NLRTMPECIWFVKQGKCELGGECLY 144
Query: 113 HHPKDRNGAGP---VSFNILG 130
HP+DR P F +LG
Sbjct: 145 FHPRDRRVECPDYNRGFCVLG 165
>gi|116004517|ref|NP_001070621.1| zinc finger protein 36, C3H type-like 1a [Danio rerio]
gi|115313405|gb|AAI24506.1| Zinc finger protein 36, C3H type-like 2 [Danio rerio]
gi|182890842|gb|AAI65552.1| Zfp36l2 protein [Danio rerio]
Length = 374
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 150 CRPFEENGACKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 201
Query: 314 TCRFDH 319
C F H
Sbjct: 202 RCHFIH 207
>gi|148234376|ref|NP_001084214.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|4580022|gb|AAD24208.1|AF061981_1 CCCH zinc finger protein C3H-2 [Xenopus laevis]
gi|54038156|gb|AAH84197.1| C3H-2 protein [Xenopus laevis]
Length = 345
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 314 TCRFDH 319
C F H
Sbjct: 173 RCHFIH 178
>gi|154303548|ref|XP_001552181.1| hypothetical protein BC1G_09345 [Botryotinia fuckeliana B05.10]
Length = 1161
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 245 LPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
LP D P C Y+ + +C G DCK H +A N L + ++PG C
Sbjct: 484 LPASVDGPQWVCYYWYHDNSCTKGVDCKMAH--------SADN--DLRVAAKPGSVTC-R 532
Query: 303 YSMYGICKFGPTCRFDH--PYAGYPINY 328
Y + G C+ G C F H P+ G I+Y
Sbjct: 533 YWIQGHCRNGIDCFFAHESPHNGRSISY 560
>gi|403269875|ref|XP_003926933.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2, partial
[Saimiri boliviensis boliviensis]
Length = 332
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 314 TCRFDH 319
C F H
Sbjct: 211 RCHFIH 216
>gi|348508274|ref|XP_003441679.1| PREDICTED: hypothetical protein LOC100696516 [Oreochromis
niloticus]
Length = 393
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H E + L + +C + G C +G
Sbjct: 125 CRSFTENGLCKYGGKCQFAHGPEELRD--------LNRHPKYKTELCRTFHTIGFCPYGI 176
Query: 314 TCRFDH 319
C F H
Sbjct: 177 RCHFVH 182
>gi|325185089|emb|CCA19581.1| AlNc14C74G5006 [Albugo laibachii Nc14]
Length = 345
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
+ + ERNG+ C Y+ GTC YGS CK+ H K+
Sbjct: 99 DRIKERNGKSLCIRYITKGTCVYGSKCKFFHDKN 132
>gi|229594940|ref|XP_001020846.3| hypothetical protein TTHERM_00411520 [Tetrahymena thermophila]
gi|225566487|gb|EAS00601.3| hypothetical protein TTHERM_00411520 [Tetrahymena thermophila
SB210]
Length = 272
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQ--------SAASNIGPLGLPSRPGQAICSNYSM 305
CR++ +G C+ GA C F H +E + + +N+ + + ++I Y+
Sbjct: 19 CRHWQTSGNCQIGAKCHFAHGQEELRNPNDPIKDATVIANVLSNPIQIQSYKSIRCKYND 78
Query: 306 YGICKFGPTCRFDH 319
G C++G C F H
Sbjct: 79 IGACRYGQACYFSH 92
>gi|118779804|ref|XP_309752.3| AGAP010954-PA [Anopheles gambiae str. PEST]
gi|116131343|gb|EAA05601.3| AGAP010954-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + + L + +C + G C +GP
Sbjct: 95 CRPYEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 146
Query: 314 TCRFDH 319
C F H
Sbjct: 147 RCHFVH 152
>gi|118376804|ref|XP_001021583.1| Zinc finger protein CTH1 [Tetrahymena thermophila]
gi|89303350|gb|EAS01338.1| Zinc finger protein CTH1 [Tetrahymena thermophila SB210]
Length = 279
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y+ G C YG C++ H + Q R+ +P C + T TC YG CKY
Sbjct: 84 CRNYQIHGTCNYGKKCQYAHGRHELQQKPERKTNQYYKTRP-CKEFFNTLTCPYGQRCKY 142
Query: 113 HH 114
+H
Sbjct: 143 NH 144
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 243 QNL--PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 300
QNL ER CR Y GTC YG C++ H + + Q +RP C
Sbjct: 71 QNLIQKERYKTELCRNYQIHGTCNYGKKCQYAHGRHELQQKPERKTNQY-YKTRP----C 125
Query: 301 SNYSMYGICKFGPTCRFDH 319
+ C +G C+++H
Sbjct: 126 KEFFNTLTCPYGQRCKYNH 144
>gi|254572800|ref|XP_002493509.1| Zinc-finger protein of unknown function [Komagataella pastoris
GS115]
gi|238033308|emb|CAY71330.1| Zinc-finger protein of unknown function [Komagataella pastoris
GS115]
gi|328354666|emb|CCA41063.1| Makorin-2 [Komagataella pastoris CBS 7435]
Length = 368
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ 92
Q G + SP C FYR+ G C GS+C F+H L + +
Sbjct: 104 QLSGSNSSKSPTSRNLSHVPCKFYRQ-GACQAGSSCPFSHT------------LTQTSQA 150
Query: 93 PDCGYYLKTGTCKYGSTCKYHH 114
C Y+ K GTCK+GS C H
Sbjct: 151 ATCKYFQK-GTCKFGSKCALVH 171
>gi|213623886|gb|AAI70356.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 254 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 308
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 309 CKFGPTCRFDHP 320
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YG+ C F HP A + C ++ G C YG+ C +
Sbjct: 138 CRLWSAPGGCPYGARCHFQHPKSARE---------------TCRHFAALGDCPYGACCHF 182
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 183 SHSPPLDRWGSG 194
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKS-------------------ARETCRHFAALGD 173
Query: 309 CKFGPTCRFDH 319
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PV + L LP R+
Sbjct: 103 RCLFIHSPQERREPPVLPDNLSLPPRR 129
>gi|148235813|ref|NP_001081888.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus laevis]
gi|4580026|gb|AAD24210.1|AF061983_1 CCCH zinc finger protein C3H-4 [Xenopus laevis]
Length = 276
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 254 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 308
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 309 CKFGPTCRFDHP 320
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YG+ C F HP A + C ++ G C YG+ C +
Sbjct: 138 CRLWSAPGGCPYGARCHFQHPKSARE---------------TCRHFAALGDCPYGACCHF 182
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 183 SHSPPLDRWGSG 194
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKS-------------------ARETCRHFAALGD 173
Query: 309 CKFGPTCRFDH 319
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PV + L LP R+
Sbjct: 103 RCLFIHSPQERREPPVLPDNLSLPPRR 129
>gi|443694613|gb|ELT95713.1| hypothetical protein CAPTEDRAFT_222693 [Capitella teleta]
Length = 1278
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD 94
C + TG C YGS+C+FNHP A++G++ E ER PD
Sbjct: 45 CHLWVSTGHCNYGSSCKFNHPTSASRGSK---ESNERERSPD 83
>gi|147901333|ref|NP_001081886.1| zinc finger protein 36, C3H1 type-like 2-B [Xenopus laevis]
gi|4580024|gb|AAD24209.1|AF061982_1 CCCH zinc finger protein C3H-3 [Xenopus laevis]
Length = 364
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 139 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 190
Query: 314 TCRFDH 319
C F H
Sbjct: 191 RCHFIH 196
>gi|170285014|gb|AAI61276.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 238 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
+S + LP R P + CR + + G C YGA C F HPK
Sbjct: 118 VSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKSI---------------- 161
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDH 319
+ +C +++ G C +G C F H
Sbjct: 162 ---REVCRHFAALGDCPYGARCHFSH 184
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 22/84 (26%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
A PY R C +R G C YG+ C F HP ++ + C ++
Sbjct: 131 AGPYRER-----CRLWRSPGGCPYGARCHFQHP---------------KSIREVCRHFAA 170
Query: 101 TGTCKYGSTCKYHH--PKDRNGAG 122
G C YG+ C + H P DR G+G
Sbjct: 171 LGDCPYGARCHFSHSPPLDRWGSG 194
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 309
CR + GTC YG C F H + +S S P LP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAP-RLPTRKYAGPYRERCRLWRSPGGC 147
Query: 310 KFGPTCRFDHP 320
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PVS + LP R+
Sbjct: 103 RCLFIHSPQERRESPVSPDAPRLPTRK 129
>gi|402226360|gb|EJU06420.1| hypothetical protein DACRYDRAFT_113130 [Dacryopinax sp. DJM-731
SS1]
Length = 410
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 43 PYPARPG--EPDCLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYRE------------ELP 87
P +PG + C F+ RTG+C G CR+ H P A ++ + P
Sbjct: 159 PSATKPGREKKQCPFFTRTGICTRGRTCRYQHDPEKVAMCPKWLKGDCPNGDSCPLSHQP 218
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPM------RQDEKSC 140
P C ++ G CK G +C Y H AG F +LG ++ + C
Sbjct: 219 TPQRMPFCVHFANAGRCKNGDSCMYPHVHLGATAGICRDFAVLGYCEKGADCDKKHVREC 278
Query: 141 PYYMRTG 147
P + TG
Sbjct: 279 PDFADTG 285
>gi|321466129|gb|EFX77126.1| hypothetical protein DAPPUDRAFT_9312 [Daphnia pulex]
Length = 70
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y GTCKYG C+F H + L + +C + G C +GP
Sbjct: 9 CRPYEENGTCKYGDKCQFAH--------GFHELRSLIRHPKYKTELCRTFHTIGFCPYGP 60
Query: 314 TCRFDH 319
C F H
Sbjct: 61 RCHFVH 66
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 35/100 (35%)
Query: 43 PYPARPGEP--DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE------------ 88
P+ P E +C FY++ G C +GS+CR+ H A REE PE
Sbjct: 105 PFRHVPDEERVECAFYKQ-GFCSHGSSCRYRHIKLA------REECPETADFALQAKVAD 157
Query: 89 ------RNGQP--------DCGYYLKTGTCKYGSTCKYHH 114
R QP C ++ K G+C +G C + H
Sbjct: 158 EENVKRRKAQPVNEFFKIAICKHWEKMGSCPFGDECHFAH 197
>gi|54038658|gb|AAH84221.1| Unknown (protein for MGC:80832) [Xenopus laevis]
Length = 335
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 110 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 161
Query: 314 TCRFDH 319
C F H
Sbjct: 162 RCHFIH 167
>gi|82132888|sp|Q805B4.1|TISDB_XENLA RecName: Full=Zinc finger protein 36, C3H1 type-like 2-B; AltName:
Full=CCCH zinc finger protein 3-B; Short=XC3H-3b
gi|27544283|dbj|BAC54909.1| hypothetical protein [Xenopus laevis]
Length = 364
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 139 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 190
Query: 314 TCRFDH 319
C F H
Sbjct: 191 RCHFIH 196
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Gallus gallus]
Length = 243
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GPTC+F HP P+
Sbjct: 152 LVGFCPEGPTCKFMHPRFELPM 173
>gi|403295148|ref|XP_003938515.1| PREDICTED: zinc finger matrin-type protein 5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403295150|ref|XP_003938516.1| PREDICTED: zinc finger matrin-type protein 5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 170
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
L E+N +P C +L TG C +GS C++ H +R+ +SF + ++E+ ++
Sbjct: 49 LDEQNKRP-CRKFLLTGQCDFGSNCRFSHMSERD-LQELSFQV------EEERRAREWLL 100
Query: 146 TGSFLPSSGLQYAGSLPTWSLQRAPYLSS 174
LP G L W +RA LSS
Sbjct: 101 DAPELPE------GHLEDWLEKRAKRLSS 123
>gi|213623884|gb|AAI70354.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 254 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 308
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 309 CKFGPTCRFDHP 320
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 12/87 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ 135
C + H PV + L LP R+
Sbjct: 103 RCLFIHSPQERREPPVLPDNLSLPPRR 129
>gi|170595935|ref|XP_001902576.1| C3H-1 protein [Brugia malayi]
gi|158589673|gb|EDP28575.1| C3H-1 protein, putative [Brugia malayi]
Length = 349
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + +TG C YG C+F H + + AA P + +C+ +++YG+C +G
Sbjct: 122 CNAFRDTGQCAYGFHCRFAHGIDEL--RAAPGPHP-----KYKTRLCNKFTLYGLCPYGS 174
Query: 314 TCRFDH 319
C+F H
Sbjct: 175 HCQFIH 180
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA-----QYREELPERNGQPDCGYYLKTGTCKYG 107
C +R TG C YG +CRF H + A +Y+ L C + G C YG
Sbjct: 122 CNAFRDTGQCAYGFHCRFAHGIDELRAAPGPHPKYKTRL--------CNKFTLYGLCPYG 173
Query: 108 STCKYHH 114
S C++ H
Sbjct: 174 SHCQFIH 180
>gi|24641595|ref|NP_727633.1| Tis11 homolog, isoform B [Drosophila melanogaster]
gi|22832154|gb|AAN09314.1| Tis11 homolog, isoform B [Drosophila melanogaster]
Length = 408
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 265
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 69 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 124
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C+F H + + C + G C +GP C F H
Sbjct: 125 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 170
>gi|357144913|ref|XP_003573458.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 362
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQ-------------------SAASNIGPLGLPSR 294
C+ + C YG C F H ++ A+ +AA+N + PS
Sbjct: 181 CKKFYTEEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGSYNSPTAAANGPTILKPSN 240
Query: 295 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS---ILDSSLMNHQAISAT 351
IC+ + M G C FG C F H A YG L + I + A+SA
Sbjct: 241 WKTRICNKWEMTGYCPFGSKCHFAHGAAEL-HKYGGGLVDVEGRDIASTPDSKQAALSAK 299
Query: 352 HSIETSPDASSKIPN 366
ET+P +++ P+
Sbjct: 300 APAETTPASTAAPPH 314
>gi|388580037|gb|EIM20355.1| hypothetical protein WALSEDRAFT_33405 [Wallemia sebi CBS 633.66]
Length = 292
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 20/121 (16%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 311
CR + GTC+YG C+F H ++ + +P P +C+ Y G C +
Sbjct: 101 CRSWEEKGTCRYGCKCQFAHGQDELRD----------VPRHPKFKTQLCATYWHSGSCPY 150
Query: 312 GPTCRFDHPYAGYPINYGLSLPPLSILDS----SLMNHQAISAT---HSIETSPDASSKI 364
G C F H + N PPL + + ++ Q+ + T HS+ +P+ S+
Sbjct: 151 GKRCCFIHSTFPHGANAN-GAPPLPLSEEEPTMTVSPRQSFTQTPTMHSLSLTPNTSTDS 209
Query: 365 P 365
P
Sbjct: 210 P 210
>gi|256088194|ref|XP_002580237.1| hypothetical protein [Schistosoma mansoni]
gi|353228956|emb|CCD75127.1| hypothetical protein Smp_172780 [Schistosoma mansoni]
Length = 872
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 60/160 (37%), Gaps = 18/160 (11%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-------PSR 294
SQ P+ P P C YY G C+ G +C F HPK R A+ P G PS
Sbjct: 18 SQTDPQMPFPPVC-YYYQAGCCRNGNECTFTHPKVRCRTFASDGWCPYGYNCHFWHDPSV 76
Query: 295 PGQAI------CSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 348
+ C Y+ CK+G C F H N G++L H I
Sbjct: 77 KPNVVNLIKKPCLFYA-NNQCKYGDKCSFSHD-IDVQNNSGITLKEYRATKKVTGVHINI 134
Query: 349 SATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTT 388
A S T+ + S N + + SV N + S+T
Sbjct: 135 EALES--TTNEISHGKENGISEASLTSVMKSNLNKTLSST 172
>gi|254573282|ref|XP_002493750.1| Member of the CCCH zinc finger family [Komagataella pastoris GS115]
gi|238033549|emb|CAY71571.1| Member of the CCCH zinc finger family [Komagataella pastoris GS115]
gi|328354427|emb|CCA40824.1| Zinc finger CCCH domain-containing protein 7 [Komagataella pastoris
CBS 7435]
Length = 244
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G C YG C+F H + + PS C+N++ +G C++G
Sbjct: 184 CDQFNQKGHCPYGTKCQFAH--------GTHELKSVKRPSNWKTKPCANWTKFGKCRYGK 235
Query: 314 TCRFDH 319
C F H
Sbjct: 236 RCCFKH 241
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + G C YG+ C+F H + + + P C + K G C+YG C +
Sbjct: 184 CDQFNQKGHCPYGTKCQFAHGTHELKSVKR----PSNWKTKPCANWTKFGKCRYGKRCCF 239
Query: 113 HHPKD 117
H D
Sbjct: 240 KHGDD 244
>gi|145505017|ref|XP_001438475.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405647|emb|CAK71078.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + TG+CK+G++C + H + + A + ++P C N+ YG C +G
Sbjct: 65 CKNFTLTGSCKFGSNCSYAHGQSELLPKAHLH---QNYKTKP----CKNFLNYGWCNYGS 117
Query: 314 TCRFDHP 320
C++ HP
Sbjct: 118 RCQYIHP 124
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGY 97
Y + C + TG C +GSNC + H E LP+ + + C
Sbjct: 55 EYTKKKKTELCKNFTLTGSCKFGSNCSYAHGQ--------SELLPKAHLHQNYKTKPCKN 106
Query: 98 YLKTGTCKYGSTCKYHHPKD 117
+L G C YGS C+Y HP++
Sbjct: 107 FLNYGWCNYGSRCQYIHPEN 126
>gi|366997863|ref|XP_003683668.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
gi|357521963|emb|CCE61234.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
Length = 294
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 204 GNIGPLSPTSIAGSNLIYSSRN--QGDLGAGAQMHILSASSQNLPERPDQPD-CRYYMNT 260
N+ LS T++ ++ S + + + A ++ + S N+ ++ + + C +
Sbjct: 130 ANLQKLSSTNVTKNDENISHKKPIKIVITTAASVNAIDYSGTNINKQLFKTELCETFTTK 189
Query: 261 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G CKYG C+F H + +N ++P C N++ G C +G C F H
Sbjct: 190 GFCKYGNKCQFAHGLNELKLKQKTN----NFRTKP----CINWAKLGYCPYGKRCCFKH 240
>gi|170068665|ref|XP_001868953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864657|gb|EDS28040.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + + L + +C + G C +GP
Sbjct: 12 CRPFEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 63
Query: 314 TCRFDH 319
C F H
Sbjct: 64 RCHFVH 69
>gi|297298126|ref|XP_002808510.1| PREDICTED: LOW QUALITY PROTEIN: butyrate response factor 1-like
[Macaca mulatta]
Length = 332
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 114 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 165
Query: 314 TCRFDH 319
C F H
Sbjct: 166 RCHFIH 171
>gi|157127959|ref|XP_001661247.1| butyrate response factor 1 (TIS11B protein) [Aedes aegypti]
gi|108882307|gb|EAT46532.1| AAEL002308-PA [Aedes aegypti]
Length = 355
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + + L + +C + G C +GP
Sbjct: 91 CRPFEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 142
Query: 314 TCRFDH 319
C F H
Sbjct: 143 RCHFVH 148
>gi|340501726|gb|EGR28473.1| hypothetical protein IMG5_174580 [Ichthyophthirius multifiliis]
Length = 222
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI-----------CS 301
+CR + G CKYG +CK+ H K R + G + I C
Sbjct: 83 ECRAFQ-RGECKYGENCKYSHEKRRTCNDFQNGNCKYGENCKYSHEIQQKRTTQQTKPCR 141
Query: 302 NYSMYGICKFGPTCRFDH 319
++ + G CK+G CRF H
Sbjct: 142 DF-LNGECKYGENCRFSH 158
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y+ G C YG NCRF+H Q E + G CKYG CKY
Sbjct: 53 CFDYQ-NGNCSYGDNCRFSHRTKNTYNQQRNECRA-----------FQRGECKYGENCKY 100
Query: 113 HHPKDR 118
H K R
Sbjct: 101 SHEKRR 106
>gi|393222216|gb|EJD07700.1| hypothetical protein FOMMEDRAFT_150244 [Fomitiporia mediterranea
MF3/22]
Length = 396
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 19/75 (25%)
Query: 245 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 304
+PER P C ++ N G CK GADC F H + +GP +C +++
Sbjct: 218 IPER--TPLCVHFANNGRCKNGADCLFPHVR----------VGPRS-------GVCRDFA 258
Query: 305 MYGICKFGPTCRFDH 319
+ G C G C H
Sbjct: 259 VLGYCDKGIDCEHQH 273
>gi|449016249|dbj|BAM79651.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 401
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 298
CRYY+ G CK+G C++ HP +++ +GP G+P+ GQA
Sbjct: 4 CRYYLQ-GNCKFGDRCRYEHPPGLGGRASRQQVGP-GMPAASGQA 46
>gi|146094028|ref|XP_001467125.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071489|emb|CAM70178.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 338
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 292
C+ ++ TG C +GA C +HHP A AS++ P LP
Sbjct: 300 CKQFVQTGRCTFGARCLYHHPTAVAAAPNASHVVPQRLP 338
>gi|409051356|gb|EKM60832.1| hypothetical protein PHACADRAFT_247008 [Phanerochaete carnosa
HHB-10118-sp]
Length = 710
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKE--RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 311
CR + G+C+YGA C+F H +E R+ Q + IC + + G C +
Sbjct: 407 CRSWEEKGSCRYGAKCQFAHGEEELRLVQRHP----------KYKTEICRTFWVSGSCPY 456
Query: 312 GPTCRFDH 319
G C F H
Sbjct: 457 GKRCCFIH 464
>gi|402584002|gb|EJW77944.1| hypothetical protein WUBG_11146, partial [Wuchereria bancrofti]
Length = 184
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 37/122 (30%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY++N C+ GA C F H + S+P + Y + G C FG
Sbjct: 11 CRYFVN-NICREGASCPFSHDRN----------------SKPDRTC--RYYLIGKCAFGT 51
Query: 314 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 373
+CR+DH PPL + +A+ + +P+A+ + N +S+
Sbjct: 52 SCRYDHKR-----------PPLDGV-------KAVKSVSRTTGTPNATKVVENGCSSSEV 93
Query: 374 VS 375
V+
Sbjct: 94 VT 95
>gi|45201139|ref|NP_986709.1| AGR044Cp [Ashbya gossypii ATCC 10895]
gi|44985922|gb|AAS54533.1| AGR044Cp [Ashbya gossypii ATCC 10895]
gi|374109960|gb|AEY98865.1| FAGR044Cp [Ashbya gossypii FDAG1]
Length = 300
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + TG CKY C+F H + S+ ++P C N+S G C++G
Sbjct: 191 CESFATTGACKYDNKCQFAHGLHELKFKERSD----KFRTKP----CINWSKTGYCRYGK 242
Query: 314 TCRFDH 319
C F H
Sbjct: 243 RCCFKH 248
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C Y + C+F H + + ++E + +P C + KTG C+YG C +
Sbjct: 191 CESFATTGACKYDNKCQFAHGLHELK---FKERSDKFRTKP-CINWSKTGYCRYGKRCCF 246
Query: 113 HHPKD 117
H D
Sbjct: 247 KHGDD 251
>gi|320582100|gb|EFW96318.1| mRNA 3'-end-processing protein, putative [Ogataea parapolymorpha
DL-1]
Length = 219
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 17/73 (23%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
PD+P C +++ +G C G DC+ HP + I Y + G+
Sbjct: 38 PDRPICEFWLQSGKCPNGNDCENKHPSKIF-----------------NNKIVCKYWLRGL 80
Query: 309 CKFGPTCRFDHPY 321
CK G C F H Y
Sbjct: 81 CKMGDDCDFLHEY 93
>gi|303277795|ref|XP_003058191.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460848|gb|EEH58142.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 216
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 244 NLPERPDQPDCRYYMNTGTCKYGADCKFHHP 274
+LP+RP+ C + TG C YG +C +HHP
Sbjct: 182 DLPQRPNAAHCIEFQKTGGCSYGKECPYHHP 212
>gi|213409996|ref|XP_002175768.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
gi|212003815|gb|EEB09475.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
Length = 495
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 26/75 (34%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL---------PSRPGQAICSNYS 304
C+ +M G C+YG+ C+F H GP+ L SRP C +YS
Sbjct: 433 CKNWMAYGRCRYGSKCQFAH-------------GPMELKTPVRHPKYKSRP----CRSYS 475
Query: 305 MYGICKFGPTCRFDH 319
+G C +G C F H
Sbjct: 476 QFGYCPYGQRCCFLH 490
>gi|6756059|ref|NP_035886.1| tristetraprolin [Mus musculus]
gi|135862|sp|P22893.1|TTP_MOUSE RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Growth
factor-inducible nuclear protein NUP475; AltName:
Full=Protein TIS11A; Short=TIS11; AltName:
Full=TPA-induced sequence 11; AltName: Full=Zinc finger
protein 36; Short=Zfp-36
gi|200100|gb|AAA39837.1| nuclear protein [Mus musculus]
gi|202169|gb|AAA72947.1| TIS11 primary response gene [Mus musculus]
gi|202206|gb|AAA40498.1| tristetraproline [Mus musculus]
gi|1020395|gb|AAC37676.1| tristetraprolin [Mus musculus]
gi|18204723|gb|AAH21391.1| Zinc finger protein 36 [Mus musculus]
gi|74191806|dbj|BAE32856.1| unnamed protein product [Mus musculus]
gi|148692194|gb|EDL24141.1| zinc finger protein 36 [Mus musculus]
Length = 319
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 152
Query: 314 TCRFDH 319
C F H
Sbjct: 153 RCHFIH 158
>gi|347659013|ref|NP_001231630.1| zinc finger protein 36, C3H1 type-like 1 isoform 2 [Homo sapiens]
Length = 407
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 189 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 240
Query: 314 TCRFDH 319
C F H
Sbjct: 241 RCHFIH 246
>gi|332024832|gb|EGI65020.1| Putative E3 ubiquitin-protein ligase makorin-1 [Acromyrmex
echinatior]
Length = 417
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N GTC+ G +C++ H + ++I + + G+CKFG
Sbjct: 11 CRYFKN-GTCREGNNCRYRHVQ---GNRNDASINEATSTHSSAYIVTCRFFKQGMCKFGS 66
Query: 314 TCRFDH 319
CRF H
Sbjct: 67 QCRFRH 72
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 21/122 (17%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY-----YLKTGTCKYGSTC 110
Y + G C G+NCR+ H QG + + E Y + K G CK+GS C
Sbjct: 13 YFKNGTCREGNNCRYRH----VQGNRNDASINEATSTHSSAYIVTCRFFKQGMCKFGSQC 68
Query: 111 KYHHPKDRNGAGPVSFNIL------------GLPMRQDEKSCPYYMRTGSFLPSSGLQYA 158
++ H + + + + ++++ +++ F+P++G A
Sbjct: 69 RFRHNSGTTDSNAIQIDATENAASGQHTSNSSRNKKTEKRTAEEWVKAPEFIPTTGSPIA 128
Query: 159 GS 160
GS
Sbjct: 129 GS 130
>gi|194895813|ref|XP_001978349.1| GG17735 [Drosophila erecta]
gi|190649998|gb|EDV47276.1| GG17735 [Drosophila erecta]
Length = 457
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 21/112 (18%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 267
++L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 104 ASLVTITENLGNMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 159
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
C+F H + + + + C + G C +GP C F H
Sbjct: 160 KCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 203
>gi|663198|emb|CAA57066.1| TIScc1 [Drosophila melanogaster]
gi|1093615|prf||2104281A cc1 gene
Length = 436
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 265
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 97 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 152
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C+F H + + C + G C +GP C F H
Sbjct: 153 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 198
>gi|312383024|gb|EFR28263.1| hypothetical protein AND_04029 [Anopheles darlingi]
Length = 572
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + L + +C + G C +GP
Sbjct: 281 CRPYEEAGECKYGDKCQFAHGMHELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 332
Query: 314 TCRFDH 319
C F H
Sbjct: 333 RCHFVH 338
>gi|156084372|ref|XP_001609669.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796921|gb|EDO06101.1| hypothetical protein BBOV_II001430 [Babesia bovis]
Length = 227
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 225 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-----PKERIA 279
N ++ ++ S + + P +P C+YY TG+C +G+DC+F H + +
Sbjct: 29 NDWEIPENKDLNCPSRTVSDTPITDHRPLCKYYYRTGSCLHGSDCRFSHNCLPLTSKELK 88
Query: 280 QSAASNIGPLGLP---------SRPGQAICSNYSMYGICKFGPTCRFDH 319
+GP PG +C N + G C C+F H
Sbjct: 89 LCRYFLMGPTNCKYTAAECKYSHEPGLFLCRNNIVNGECNNLLRCKFKH 137
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 12/76 (15%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
S P P C +Y RTG C +GS+CRF+H + + C Y+L
Sbjct: 46 VSDTPITDHRPLCKYYYRTGSCLHGSDCRFSHNCLPLTSKELKL----------CRYFLM 95
Query: 101 TGT-CKY-GSTCKYHH 114
T CKY + CKY H
Sbjct: 96 GPTNCKYTAAECKYSH 111
>gi|397507282|ref|XP_003824130.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1 [Pan
paniscus]
Length = 407
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 189 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 240
Query: 314 TCRFDH 319
C F H
Sbjct: 241 RCHFIH 246
>gi|24641593|ref|NP_511141.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|442616128|ref|NP_001259490.1| Tis11 homolog, isoform C [Drosophila melanogaster]
gi|76803822|sp|P47980.2|TIS1_DROME RecName: Full=Protein TIS11; AltName: Full=dTIS11
gi|22832153|gb|AAF48194.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|189182164|gb|ACD81858.1| LD36337p [Drosophila melanogaster]
gi|440216705|gb|AGB95332.1| Tis11 homolog, isoform C [Drosophila melanogaster]
Length = 436
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 265
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 97 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 152
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C+F H + + C + G C +GP C F H
Sbjct: 153 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 198
>gi|148356224|ref|NP_579824.2| tristetraprolin [Rattus norvegicus]
gi|149056466|gb|EDM07897.1| zinc finger protein 36 [Rattus norvegicus]
Length = 326
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 108 CRTYSESGRCRYGAKCQFAHGPGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 159
Query: 314 TCRFDH 319
C F H
Sbjct: 160 RCHFIH 165
>gi|1717819|sp|P47973.1|TTP_RAT RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Protein
TIS11A; Short=TIS11; AltName: Full=Zinc finger protein
36; Short=Zfp-36
gi|57759|emb|CAA44970.1| Tis 11 protein [Rattus rattus]
gi|9971206|dbj|BAB12432.1| TIS11 [Rattus norvegicus]
gi|37805235|gb|AAH60308.1| Zinc finger protein 36 [Rattus norvegicus]
Length = 320
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 102 CRTYSESGRCRYGAKCQFAHGPGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 153
Query: 314 TCRFDH 319
C F H
Sbjct: 154 RCHFIH 159
>gi|327288843|ref|XP_003229134.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Anolis
carolinensis]
Length = 624
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 263 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 322
C +GA C + H E+ + +IG C +S++G C+FG TCRF +
Sbjct: 83 CLFGAMCPWQHDLEKYIATKLPDIGD----------CCILFSLFGKCRFGITCRFGGAHL 132
Query: 323 G 323
G
Sbjct: 133 G 133
>gi|299755658|ref|XP_002912126.1| no arches protein [Coprinopsis cinerea okayama7#130]
gi|298411323|gb|EFI28632.1| no arches protein [Coprinopsis cinerea okayama7#130]
Length = 278
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C ++ G C G +C + HPKER + N G L P + + + + G
Sbjct: 120 PECWWFAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPTCPRKHVRKVACQLYLTG 179
Query: 308 ICKFGPTCRFDHPYAGYP 325
C GP C HP P
Sbjct: 180 FCPAGPECPKGHPKPQLP 197
>gi|195352688|ref|XP_002042843.1| GM11580 [Drosophila sechellia]
gi|194126890|gb|EDW48933.1| GM11580 [Drosophila sechellia]
Length = 431
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 215 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 265
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 98 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 153
Query: 266 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C+F H + + C + G C +GP C F H
Sbjct: 154 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 199
>gi|449502445|ref|XP_004174509.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2-like [Taeniopygia guttata]
Length = 384
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 167 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 218
Query: 314 TCRFDH 319
C F H
Sbjct: 219 RCHFIH 224
>gi|339247875|ref|XP_003375571.1| conserved hypothetical protein [Trichinella spiralis]
gi|316971046|gb|EFV54885.1| conserved hypothetical protein [Trichinella spiralis]
Length = 198
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY++N C++G+ C F H + S N P C N +G CK+GP
Sbjct: 35 CRYFVNGPGCRFGSSCFFAHNLVELRPSMYRNFLYKTEP-------CRNLRTWGHCKYGP 87
Query: 314 TCRFDH 319
C + H
Sbjct: 88 RCLYLH 93
>gi|449551266|gb|EMD42230.1| hypothetical protein CERSUDRAFT_110762 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 307
P+C +Y G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERRIECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG 180
Query: 308 ICKFGPTCRFDHPYAGYP 325
C GP C HP P
Sbjct: 181 FCPLGPECPRGHPKPDIP 198
>gi|354483439|ref|XP_003503900.1| PREDICTED: tristetraprolin-like [Cricetulus griseus]
Length = 374
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 157 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 208
Query: 314 TCRFDH 319
C F H
Sbjct: 209 RCHFIH 214
>gi|281349381|gb|EFB24965.1| hypothetical protein PANDA_005238 [Ailuropoda melanoleuca]
Length = 320
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 102 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 153
Query: 314 TCRFDH 319
C F H
Sbjct: 154 RCHFIH 159
>gi|410048467|ref|XP_003314464.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Pan
troglodytes]
Length = 391
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 173 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 224
Query: 314 TCRFDH 319
C F H
Sbjct: 225 RCHFIH 230
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 20/118 (16%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
+P Q+ + A +A ++ A H Q GGG +S Y P + G
Sbjct: 129 LPHFSQLAAPVGAATNAPGLQAA----AAHPKQPGGGQVNSSRYKTELCRP----FEENG 180
Query: 61 LCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
C YG C+F H + + +Y+ EL C + G C YG C + H
Sbjct: 181 ACKYGDKCQFAHGIHELRSLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 230
>gi|357158149|ref|XP_003578032.1| PREDICTED: zinc finger CCCH domain-containing protein 59-like
[Brachypodium distachyon]
Length = 608
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 20/105 (19%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
A+N + WR + ++G G C Y +G C GS C F H
Sbjct: 293 AENTDLQYWRYDVKRQRQG----------QTNGSLLCFKYTSSGSCPRGSKCNFRHD--- 339
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
EE E + C +L G C+ G C+Y H GA
Sbjct: 340 -------EEAREHCQRNVCFDFLNKGKCEKGPECRYAHSLSEEGA 377
>gi|169843403|ref|XP_001828431.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
gi|116510528|gb|EAU93423.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
Length = 738
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+C+YG+ C+F H +E + + + + IC + + G C +G
Sbjct: 411 CRSWEEKGSCRYGSKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 462
Query: 314 TCRFDH 319
C F H
Sbjct: 463 RCCFIH 468
>gi|417399200|gb|JAA46628.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 338
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|403355299|gb|EJY77222.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 343
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 229 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP 288
L AG Q + S + C+ + N G+C +G C F H +++
Sbjct: 17 LIAGQQAQEVIVPSTPFLHKYKTELCKNWENQGSCIFGDQCSFAHGLQQLH-------TK 69
Query: 289 LGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
+ LPS+ +C Y C +G C+F H
Sbjct: 70 IDLPSKYKTRLCKKYQEELYCPYGVRCQFIH 100
>gi|301763295|ref|XP_002917068.1| PREDICTED: butyrate response factor 1-like [Ailuropoda melanoleuca]
Length = 338
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|195132534|ref|XP_002010698.1| GI21684 [Drosophila mojavensis]
gi|193907486|gb|EDW06353.1| GI21684 [Drosophila mojavensis]
Length = 411
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 161 CRPYEEAGECKYGEKCQFAH--------GCHELRNLQRHPKYKTEYCRTFHSVGFCPYGP 212
Query: 314 TCRFDH 319
C F H
Sbjct: 213 RCHFVH 218
>gi|395504153|ref|XP_003756421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sarcophilus
harrisii]
Length = 338
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 314 TCRFDH 319
C F H
Sbjct: 173 RCHFIH 178
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 91 SFSEGGERLLPPQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 146
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 147 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 178
>gi|54695804|gb|AAV38274.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|61366592|gb|AAX42880.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|73963334|ref|XP_853070.1| PREDICTED: zinc finger protein 36, C3H type-like 1 isoform 3 [Canis
lupus familiaris]
Length = 338
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|351714712|gb|EHB17631.1| Butyrate response factor 1 [Heterocephalus glaber]
Length = 338
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|296215346|ref|XP_002754086.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Callithrix
jacchus]
Length = 338
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|213407162|ref|XP_002174352.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
gi|212002399|gb|EEB08059.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
Length = 518
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 16/62 (25%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+R+ G C G+NC F+H N + C Y+LK G CK+GS C
Sbjct: 57 CKFFRQ-GACTAGNNCPFSHSL--------------DNERSPCKYFLK-GNCKFGSKCAL 100
Query: 113 HH 114
H
Sbjct: 101 SH 102
>gi|149737318|ref|XP_001500199.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Equus
caballus]
Length = 338
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|344273937|ref|XP_003408775.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Loxodonta
africana]
Length = 338
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|366990107|ref|XP_003674821.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
gi|342300685|emb|CCC68448.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
Length = 376
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + SN ++P C N++ G C +G
Sbjct: 275 CESFTTKGHCKYGNKCQFAHGLHELKIKQRSN----NFRTKP----CVNWTKLGYCPYGK 326
Query: 314 TCRFDH 319
C F H
Sbjct: 327 RCCFKH 332
>gi|410962515|ref|XP_003987814.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Felis catus]
gi|410962517|ref|XP_003987815.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Felis catus]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|348573284|ref|XP_003472421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Cavia
porcellus]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|344236941|gb|EGV93044.1| Tristetraproline [Cricetulus griseus]
Length = 315
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 98 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 149
Query: 314 TCRFDH 319
C F H
Sbjct: 150 RCHFIH 155
>gi|392571357|gb|EIW64529.1| hypothetical protein TRAVEDRAFT_139454 [Trametes versicolor
FP-101664 SS1]
Length = 761
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+C+YGA C+F H ++ + + + + IC + + G C +G
Sbjct: 452 CRSWEEKGSCRYGAKCQFAHGEDELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 503
Query: 314 TCRFDH 319
C F H
Sbjct: 504 RCCFIH 509
>gi|410076854|ref|XP_003956009.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
gi|372462592|emb|CCF56874.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
Length = 298
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + SN +RP C N+ G C +G
Sbjct: 198 CESFTTKGFCKYGNKCQFAHGLTELKFKQRSN----NFRTRP----CINWQKLGYCPYGK 249
Query: 314 TCRFDH 319
C F H
Sbjct: 250 RCCFKH 255
>gi|354472162|ref|XP_003498309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Cricetulus
griseus]
gi|344235754|gb|EGV91857.1| Butyrate response factor 1 [Cricetulus griseus]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|291406477|ref|XP_002719590.1| PREDICTED: butyrate response factor 1 [Oryctolagus cuniculus]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|213511967|ref|NP_001133923.1| Butyrate response factor 1 [Salmo salar]
gi|209155826|gb|ACI34145.1| Butyrate response factor 1 [Salmo salar]
Length = 364
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG+ C+F H + + G P +A C + +G C +G
Sbjct: 126 CRSFQENGSCKYGSKCQFAHGEPELR-------GLYRHPKYKTEA-CRTFYNFGYCPYGA 177
Query: 314 TCRFDHPYAGYPI 326
C F H P+
Sbjct: 178 RCHFIHEEKLTPL 190
>gi|335292719|ref|XP_003356787.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sus scrofa]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|197097548|ref|NP_001124577.1| zinc finger protein 36, C3H1 type-like 1 [Pongo abelii]
gi|55725015|emb|CAH89375.1| hypothetical protein [Pongo abelii]
Length = 316
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 98 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 149
Query: 314 TCRFDH 319
C F H
Sbjct: 150 RCHFIH 155
>gi|345305259|ref|XP_001512096.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 243
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 69 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 126
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPL 335
+ G C GP+C+F HP P+ PPL
Sbjct: 127 LVGFCPEGPSCKFMHPRFELPMGTA-EQPPL 156
>gi|256088628|ref|XP_002580430.1| zinc finger protein [Schistosoma mansoni]
gi|350644405|emb|CCD60847.1| zinc finger protein, putative [Schistosoma mansoni]
Length = 353
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYL 99
Q + Y AR CL Y++ C G NC F H + Q+ + R C Y
Sbjct: 220 QDAIYNARYKTQPCLHYQKYKHCPLGDNCHFAHGPNELKYPQFHPKYRTR----ICMNYA 275
Query: 100 KTGTCKYGSTCKYHH 114
GTC YG+ C + H
Sbjct: 276 NNGTCPYGNNCYFLH 290
>gi|12836625|dbj|BAB23739.1| unnamed protein product [Mus musculus]
Length = 307
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 89 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 140
Query: 314 TCRFDH 319
C F H
Sbjct: 141 RCHFIH 146
>gi|402876515|ref|XP_003902009.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Papio anubis]
gi|403264495|ref|XP_003924515.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Saimiri
boliviensis boliviensis]
gi|355693383|gb|EHH27986.1| hypothetical protein EGK_18316 [Macaca mulatta]
gi|380815918|gb|AFE79833.1| zinc finger protein 36, C3H1 type-like 1 [Macaca mulatta]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|90075092|dbj|BAE87226.1| unnamed protein product [Macaca fascicularis]
Length = 338
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|297742083|emb|CBI33870.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 16/78 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAA------------SNIGPLGLPSRPGQAICS 301
C+ + C YG +C F H ++ A+ + SNI P +R IC+
Sbjct: 161 CKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPGAGGGGSNIKPSNWKTR----ICN 216
Query: 302 NYSMYGICKFGPTCRFDH 319
+ + G C FG C F H
Sbjct: 217 KWELTGYCPFGSKCHFAH 234
>gi|195398865|ref|XP_002058041.1| GJ15863 [Drosophila virilis]
gi|194150465|gb|EDW66149.1| GJ15863 [Drosophila virilis]
Length = 433
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 125 CRPYEEAGECKYGEKCQFAH--------GYHELRNLQRHPKYKTEYCRTFHSVGFCPYGP 176
Query: 314 TCRFDH 319
C F H
Sbjct: 177 RCHFVH 182
>gi|156837017|ref|XP_001642545.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113087|gb|EDO14687.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 304
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ + G CKYG C+F H + + SN ++P C N++ G C +G
Sbjct: 184 CKTFTTKGYCKYGNKCQFAHGLHEVKFKSRSN----NYRTKP----CINWTKLGYCPYGV 235
Query: 314 TCRFDH 319
C F H
Sbjct: 236 RCCFKH 241
>gi|155372187|ref|NP_001094704.1| zinc finger protein 36, C3H1 type-like 1 [Bos taurus]
gi|154425731|gb|AAI51441.1| ZFP36L1 protein [Bos taurus]
gi|296482999|tpg|DAA25114.1| TPA: butyrate response factor 1 [Bos taurus]
gi|440897352|gb|ELR49063.1| Zinc finger protein 36, C3H1 type-like 1 [Bos grunniens mutus]
Length = 338
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|6680808|ref|NP_031590.1| zinc finger protein 36, C3H1 type-like 1 [Mus musculus]
gi|135863|sp|P23950.1|TISB_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName: Full=Protein
TIS11B
gi|202065|gb|AAA72948.1| TIS11 primary response gene [Mus musculus]
gi|26331836|dbj|BAC29648.1| unnamed protein product [Mus musculus]
gi|26341688|dbj|BAC34506.1| unnamed protein product [Mus musculus]
gi|148670707|gb|EDL02654.1| zinc finger protein 36, C3H type-like 1 [Mus musculus]
Length = 338
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|327278691|ref|XP_003224094.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Anolis
carolinensis]
Length = 480
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 176 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 227
Query: 314 TCRFDH 319
C F H
Sbjct: 228 RCHFIH 233
>gi|8392999|ref|NP_058868.1| zinc finger protein 36, C3H1 type-like 1 [Rattus norvegicus]
gi|135864|sp|P17431.1|TISB_RAT RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-inducible protein CMG1; AltName: Full=Protein
TIS11B
gi|55961|emb|CAA36826.1| unnamed protein product [Rattus norvegicus]
Length = 338
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|431904505|gb|ELK09888.1| Butyrate response factor 1 [Pteropus alecto]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|61370292|gb|AAX43470.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|395849618|ref|XP_003797418.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Otolemur garnettii]
gi|395849620|ref|XP_003797419.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Otolemur garnettii]
gi|395849622|ref|XP_003797420.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 3
[Otolemur garnettii]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|253743945|gb|EET00219.1| Zinc finger domain-containing protein [Giardia intestinalis ATCC
50581]
Length = 192
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G C YG C+F H E SN+ + L C+++ G C +G
Sbjct: 36 CNCFAEFGRCDYGDRCQFAHSMEEFQHRRRSNVKDMKL--------CTDFITQGYCPYGR 87
Query: 314 TCRFDH 319
C F H
Sbjct: 88 RCNFLH 93
>gi|193785835|dbj|BAG51270.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTRKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|145524992|ref|XP_001448318.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415862|emb|CAK80921.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 234 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 293
++ I + P + + CR Y G CKYG C F H A++ ++ +
Sbjct: 36 KLRIKKCYQEEEPLKKKKDLCRNYQMNGCCKYGDQCFFIHTP---AKTESTLYSSTSTKT 92
Query: 294 RPGQAICSNYSMYGICKFGPTCRFDH 319
+P C Y G C FGP C+F H
Sbjct: 93 KP----CKRY-FSGFCGFGPKCQFLH 113
>gi|1480243|emb|CAA67781.1| Berg36 [Homo sapiens]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|15812180|ref|NP_004917.2| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|347659004|ref|NP_001231627.1| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|1351254|sp|Q07352.1|TISB_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-response factor 1; Short=ERF-1; AltName:
Full=Protein TIS11B
gi|825653|emb|CAA55670.1| ERF-1 [Homo sapiens]
gi|17390794|gb|AAH18340.1| Zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|54695806|gb|AAV38275.1| zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|61356812|gb|AAX41289.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|61360527|gb|AAX41874.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|119601373|gb|EAW80967.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|119601374|gb|EAW80968.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|123980892|gb|ABM82275.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|123995707|gb|ABM85455.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|168277788|dbj|BAG10872.1| butyrate response factor 1 [synthetic construct]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|332228957|ref|XP_003263654.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Nomascus leucogenys]
gi|441595135|ref|XP_004087218.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Nomascus
leucogenys]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|207080074|ref|NP_001128956.1| DKFZP469G0620 protein [Pongo abelii]
gi|55732554|emb|CAH92977.1| hypothetical protein [Pongo abelii]
Length = 338
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|241953559|ref|XP_002419501.1| zinc finger protein, putative [Candida dubliniensis CD36]
gi|223642841|emb|CAX43096.1| zinc finger protein, putative [Candida dubliniensis CD36]
Length = 505
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 12/62 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C FYR+ G+C G++C F+H A GA ++LP C Y+ K G CK+G C
Sbjct: 120 CKFYRQ-GVCQAGNSCPFSHNLDGALGA---DKLP-------CKYFQK-GNCKFGLKCAL 167
Query: 113 HH 114
H
Sbjct: 168 AH 169
>gi|147903417|ref|NP_001079662.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Xenopus laevis]
gi|82176436|sp|Q7ZWS1.1|DUS3L_XENLA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|28436916|gb|AAH46730.1| MGC53781 protein [Xenopus laevis]
Length = 640
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C +G C+F+H A+Y + PE + +P+C Y G C YG TC++
Sbjct: 140 CFFGDKCKFSHDV-----AKYVSQKPE-DIRPNCHLYETFGKCIYGVTCRF 184
>gi|149590799|ref|XP_001521042.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-B-like
[Ornithorhynchus anatinus]
Length = 345
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 133 CRPFEESGACKYGDKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 184
Query: 314 TCRFDH 319
C F H
Sbjct: 185 RCHFIH 190
>gi|194377356|dbj|BAG57626.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 247 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 304
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 305 LVGFCPEGPSCKFMHPRFELPM 326
>gi|62204272|gb|AAH92716.1| Cth1 protein, partial [Danio rerio]
Length = 257
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 103 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 151
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 152 YGTRCLFVH 160
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 180 QSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILS 239
++ +PL+ SPS + P W L Y+ R Q G +H L
Sbjct: 76 EALLPLVESPSPPMTP---WLCSTRYKTELCSRYAETGTCKYAERCQFAHG----LHDLH 128
Query: 240 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSRPGQ- 297
S++ + + CR Y G C YG C F H+ KE+ P RP +
Sbjct: 129 VPSRHPKYKTEL--CRTYHTAGYCVYGTRCLFVHNLKEQ-------------RPIRPRRR 173
Query: 298 -AICSNYSMYGICKFGPTCRFDHPYAG 323
C + +G+C FG C F H G
Sbjct: 174 NVPCRTFRAFGVCPFGNRCHFLHVEGG 200
>gi|397507284|ref|XP_003824131.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2 [Pan
paniscus]
Length = 338
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|532796|gb|AAA62666.1| DTIS11 protein [Drosophila melanogaster]
Length = 437
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 21/112 (18%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 267
++L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 100 ASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 155
Query: 268 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
C+F H + + C + G C +GP C F H
Sbjct: 156 KCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 199
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I + GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDARFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|432107119|gb|ELK32542.1| Zinc finger protein 36, C3H1 type-like 1 [Myotis davidii]
Length = 319
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 101 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 152
Query: 314 TCRFDH 319
C F H
Sbjct: 153 RCHFIH 158
>gi|328851409|gb|EGG00564.1| hypothetical protein MELLADRAFT_32022 [Melampsora larici-populina
98AG31]
Length = 63
Score = 39.3 bits (90), Expect = 3.3, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+Y C+F H ++ + P+ + IC + ++G C +G
Sbjct: 6 CRSWEEKGTCRYSTKCQFAHGQDELR--------PVSRHPKFKTEICRTFCLHGSCPYGK 57
Query: 314 TCRFDH 319
C F H
Sbjct: 58 RCCFLH 63
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|340375929|ref|XP_003386486.1| PREDICTED: hypothetical protein LOC100633552 [Amphimedon
queenslandica]
Length = 297
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y+ G C YG C+F H + + +Y+ EL C + TG C YGS
Sbjct: 78 CRPYQEYGYCKYGEKCQFAHGMHDLRSLPRHPKYKTEL--------CRTFYSTGYCPYGS 129
Query: 109 TCKYHHPKDRN 119
C + H K+ +
Sbjct: 130 RCHFIHSKNES 140
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Otolemur garnettii]
Length = 269
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|431920161|gb|ELK18200.1| Tristetraproline [Pteropus alecto]
Length = 326
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 159
Query: 314 TCRFDH 319
C F H
Sbjct: 160 RCHFIH 165
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YG+ C+F H A++ +Y+ EL C + G C YGS
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTEL--------CHKFYLQGRCPYGS 159
Query: 109 TCKYHHPKDRNGAGPVSFNIL 129
C + H + A P ++L
Sbjct: 160 RCHFIHNPSEDQAAPGHPHVL 180
>gi|119597068|gb|EAW76662.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_a [Homo sapiens]
Length = 216
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|401825157|ref|XP_003886674.1| CCCH-type Zn-finger protein [Encephalitozoon hellem ATCC 50504]
gi|395459819|gb|AFM97693.1| CCCH-type Zn-finger protein [Encephalitozoon hellem ATCC 50504]
Length = 346
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 23/114 (20%)
Query: 26 RLKIHDNQEGGGVAQASPYPARPGEPD----------CLFYRRTGLCGYGSNCRFNHPA- 74
RLK HD + G Q AR P+ C + G C YG C+F H
Sbjct: 81 RLKGHDLKVPAGTTQTHFSSARGSHPNKKYQLYKTEMCRSHTEIGYCKYGDKCQFAHSKA 140
Query: 75 ---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY-HHPKDRNGAGPV 124
Y + +Y+ E C + + G+C YG C + H P G PV
Sbjct: 141 ELRYVQRHPKYKTET--------CKTFWEEGSCPYGKRCCFIHIPNTDMGNLPV 186
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=NS1 effector domain-binding
protein 1; Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|426201842|gb|EKV51765.1| hypothetical protein AGABI2DRAFT_62064 [Agaricus bisporus var.
bisporus H97]
Length = 738
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+Y A C+F H ++ + + + + IC + + G C +G
Sbjct: 437 CRSWEEKGTCRYAAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 488
Query: 314 TCRFDH 319
C F H
Sbjct: 489 RCCFIH 494
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Canis lupus familiaris]
Length = 269
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|409083106|gb|EKM83463.1| hypothetical protein AGABI1DRAFT_33015 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 748
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+Y A C+F H ++ + + + + IC + + G C +G
Sbjct: 447 CRSWEEKGTCRYAAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 498
Query: 314 TCRFDH 319
C F H
Sbjct: 499 RCCFIH 504
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|145507218|ref|XP_001439564.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406759|emb|CAK72167.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 243 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 302
QN RP C+ +MN G C YG+ C++ HP+ I + + + + Q ICSN
Sbjct: 95 QNYKTRP----CKNFMNDGWCNYGSRCQYIHPENSIIKKKTHKL--ISQDKQAQQKICSN 148
>gi|126340761|ref|XP_001368017.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Monodelphis
domestica]
Length = 478
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G+NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 59 YFMHGVCKEGNNCRYSHDLSTSQSAMV------------CRYYQR-GCCAYGDRCRYEHT 105
Query: 116 KDRNGAGPVSFNILGLP 132
K + N+ P
Sbjct: 106 KPLKREEVTAANLAAKP 122
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 46/170 (27%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
Q CRY+M+ G CK G +C++ H L + +C Y G C
Sbjct: 54 QVTCRYFMH-GVCKEGNNCRYSH----------------DLSTSQSAMVCRYYQR-GCCA 95
Query: 311 FGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQN 370
+G CR++H L + +A + + P ASS +P V+
Sbjct: 96 YGDRCRYEHT-------------------KPLKREEVTAANLAAKPDPPASSSLPTLVET 136
Query: 371 SDAVSV---QHQNPDMKNSTTKNSDDSSKVDHPP------HSVPNCSEPP 411
S + +N + + D + ++ P + P+C+E P
Sbjct: 137 LAEASTGEAETENSNFAAAGAGGEDWVNAIEFVPGQPYCGRAAPSCTEAP 186
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|298712712|emb|CBJ48737.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 485
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELPERNGQPD- 94
A+P R C FY + G C YG++CRF H A GA + P R +P
Sbjct: 2 AAPSSGRQSRTLCTFYEK-GSCRYGASCRFTHGTSDSRELRADGAAGETQTP-RQARPTA 59
Query: 95 -------CGYYLKTGTCKYGSTCKYHH 114
C ++ K G C G++C++ H
Sbjct: 60 STSSKEPCRFFAK-GKCVRGASCRFLH 85
>gi|242044496|ref|XP_002460119.1| hypothetical protein SORBIDRAFT_02g023040 [Sorghum bicolor]
gi|241923496|gb|EER96640.1| hypothetical protein SORBIDRAFT_02g023040 [Sorghum bicolor]
Length = 588
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 28/102 (27%)
Query: 17 ADNIEEAIWRLKI----HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH 72
A+NI+ WR + H +GGG+ C + +G C GS C + H
Sbjct: 274 AENIDSQYWRYDVKRQRHGEADGGGL--------------CFKFTSSGSCQRGSKCNYRH 319
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
EE E + C +L G C+ G CK+ H
Sbjct: 320 D----------EEALEHYQRNVCFDFLNKGKCERGPECKFVH 351
>gi|270289752|ref|NP_001161891.1| tristetraprolin [Sus scrofa]
gi|335289681|ref|XP_003355955.1| PREDICTED: tristetraprolin-like [Sus scrofa]
gi|262069462|gb|ACY08229.1| tristetraprolin [Sus scrofa]
gi|299832919|gb|ADJ56410.1| tristetraprolin [Sus scrofa]
gi|304422959|gb|ADM32892.1| tristetraprolin [Sus scrofa]
Length = 326
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 159
Query: 314 TCRFDH 319
C F H
Sbjct: 160 RCHFIH 165
>gi|145346967|ref|XP_001417952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578180|gb|ABO96245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 465
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 250 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL--PSRPGQAICSNYSMYG 307
++ D + + G+C ADC+F H E AA + G+ P R +C +++ G
Sbjct: 38 ERSDACFDWSRGSCAR-ADCRFSHEGEAGGNPAAGGVMGRGVGSPHRAAAGVCFDHAK-G 95
Query: 308 ICKFGPTCRFDH 319
CK G CRF H
Sbjct: 96 TCKRGDQCRFSH 107
>gi|405958077|gb|EKC24240.1| Uncharacterized protein C18H10.09 [Crassostrea gigas]
Length = 764
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 28/107 (26%)
Query: 53 CLFYRRTGLCGYGSNCRFNH----------------------PAYAAQGAQYREELPERN 90
C + R G C YG+NCRF H P +A++ ++ + +
Sbjct: 84 CFSFERYGNCKYGNNCRFLHALPSDEKVKTSKSAKSYLADKKPQHASKKTKHDK---QDQ 140
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDE 137
G+ ++ + G C+ G C+++HP N A V + + L ++E
Sbjct: 141 GRRRVCHFFQEGHCQKGDKCRFYHP---NSANKVEVSDVILQGDKEE 184
>gi|145509076|ref|XP_001440482.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407699|emb|CAK73085.1| unnamed protein product [Paramecium tetraurelia]
Length = 195
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKT 101
Y + C + TG C +G C F H Q + L ++ C Y
Sbjct: 52 EEYTKKKKTELCKNFELTGFCKFGDECSFAHGQLELQA---KTHLHQKYKTKPCNRYFNQ 108
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSF 126
G C YG C+Y H + ++ F
Sbjct: 109 GFCPYGIRCQYLHDELKDQQKFEKF 133
>gi|241674813|ref|XP_002400152.1| makorin, putative [Ixodes scapularis]
gi|215504190|gb|EEC13684.1| makorin, putative [Ixodes scapularis]
Length = 411
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 18/67 (26%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYH 113
Y +G+C G C F+H A G PD C YYLK G C YGS C+Y
Sbjct: 10 YFLSGMCRDGQRCHFSHDRAA--------------GAPDNVCRYYLK-GECMYGSRCRYD 54
Query: 114 HPK-DRN 119
H + DRN
Sbjct: 55 HVRTDRN 61
>gi|195447116|ref|XP_002071071.1| GK25600 [Drosophila willistoni]
gi|194167156|gb|EDW82057.1| GK25600 [Drosophila willistoni]
Length = 451
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 21/111 (18%)
Query: 218 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGAD 268
+L+ N G + +H +Q+ P P QP CR Y G CKYG
Sbjct: 116 SLVTIIENLGSMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPYEEAGECKYGEK 171
Query: 269 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
C+F H + L + C + G C +GP C F H
Sbjct: 172 CQFAHGYHELRN--------LQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 214
>gi|392597123|gb|EIW86445.1| hypothetical protein CONPUDRAFT_78791 [Coniophora puteana
RWD-64-598 SS2]
Length = 654
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + GTC+YG C+F H + + A + IC + + G C +G
Sbjct: 360 CRSWEEKGTCRYGTKCQFAHGEGELRSVARH--------PKYKTEICRTFWVSGACPYGK 411
Query: 314 TCRFDH---PYAGYPINYGLSLPPLSILDS 340
C F H P G + PP + +DS
Sbjct: 412 RCCFIHTELPANGAAPGAEGAPPPSATIDS 441
>gi|410927366|ref|XP_003977120.1| PREDICTED: uncharacterized protein LOC101065854 [Takifugu rubripes]
Length = 412
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + +G C YG C+F H A EEL + N P C + G C YG
Sbjct: 161 CRSFTESGFCKYGGKCQFAHGA---------EELRDLNRHPKYKTEPCRTFHTIGFCPYG 211
Query: 108 STCKYHHPKDRNGA 121
C + H D A
Sbjct: 212 VRCHFVHNGDEENA 225
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H E + L + C + G C +G
Sbjct: 161 CRSFTESGFCKYGGKCQFAHGAEELRD--------LNRHPKYKTEPCRTFHTIGFCPYGV 212
Query: 314 TCRFDH 319
C F H
Sbjct: 213 RCHFVH 218
>gi|393240356|gb|EJD47882.1| hypothetical protein AURDEDRAFT_144223 [Auricularia delicata
TFB-10046 SS5]
Length = 905
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNH--PAYAAQGAQYREELPERNGQPDCGYYLKTG 102
P+R + C+F+ G C G NC F+H P + G P QP C Y+L+ G
Sbjct: 41 PSRGSKTPCVFWS-AGTCTKGKNCEFSHATPQSTSSG-------PPHASQPLCTYFLQ-G 91
Query: 103 TCKYGSTCKYHH 114
C G CK+ H
Sbjct: 92 RCAAGQGCKFLH 103
>gi|348536391|ref|XP_003455680.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Oreochromis niloticus]
Length = 431
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 19/86 (22%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+M+ G CK G +C++ H S+P IC + G C FG
Sbjct: 24 CRYFMH-GLCKEGENCRYSHDL---------------TSSKPASMICKFFQK-GNCAFGD 66
Query: 314 TCRFDH--PYAGYPINYGLSLPPLSI 337
CRF+H P + +LP S+
Sbjct: 67 RCRFEHSKPVKNEELPASQTLPLASV 92
>gi|440910333|gb|ELR60141.1| Tristetraprolin, partial [Bos grunniens mutus]
Length = 318
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 100 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 148
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 149 YGSRCHFIH 157
>gi|82268116|sp|Q4SRI6.1|MKRN1_TETNG RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|47217223|emb|CAF96746.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 17/66 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+M+ G CK G +C++ H +N S+P IC + G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHD--------LTN-------SKPAAMICKFFQK-GNCVFGE 66
Query: 314 TCRFDH 319
CRFDH
Sbjct: 67 RCRFDH 72
>gi|395539534|ref|XP_003771723.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Sarcophilus
harrisii]
Length = 432
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G+NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 13 YFMHGVCKEGNNCRYSHDLSTSQSAMV------------CRYYQR-GCCAYGDRCRYEHT 59
Query: 116 KDRNGAGPVSFNILGLP 132
K + N+ P
Sbjct: 60 KPLKREEVTAANLAAKP 76
>gi|58263406|ref|XP_569113.1| no arches protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108566|ref|XP_777234.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819807|sp|P0CS65.1|YTH1_CRYNB RecName: Full=mRNA 3'-end-processing protein YTH1
gi|338819808|sp|P0CS64.1|YTH1_CRYNJ RecName: Full=mRNA 3'-end-processing protein YTH1
gi|50259919|gb|EAL22587.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223763|gb|AAW41806.1| no arches protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 332
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 306
P C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 307 GICKFGPTCRFDHPYAGYP 325
G C G C+ HP P
Sbjct: 184 GFCPDGKDCKLAHPSPNRP 202
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 17/81 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P C +++K G C+ G C Y
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDF-------------NLRTMPVCIWFVKQGKCELGGECLY 144
Query: 113 HHPKDRNGAGP---VSFNILG 130
HP+DR P F +LG
Sbjct: 145 FHPRDRRVECPDYNRGFCVLG 165
>gi|413947016|gb|AFW79665.1| putative RNA helicase family protein [Zea mays]
Length = 1007
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 15/80 (18%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G C+F+ G C G CRF+H + A + P C +YL C+ G
Sbjct: 725 GTQACVFFA-NGSCNLGDVCRFSHSSLAPK--------------PVCKFYLTLQGCRNGR 769
Query: 109 TCKYHHPKDRNGAGPVSFNI 128
+C Y H + PV+ I
Sbjct: 770 SCPYSHDSGSLVSAPVTSGI 789
>gi|312072010|ref|XP_003138871.1| zinc finger C-x8-C-x5-C-x3-H type containing protein [Loa loa]
Length = 347
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 32/127 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N C+ G+ C F H + S+P + Y + G C FG
Sbjct: 15 CRYFAN-NICREGSSCPFSHDRN----------------SKPDRTC--RYYLIGKCAFGT 55
Query: 314 TCRFDH---PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSP-----DA 360
+CR+DH P G S P ++++ N + + ++ S DA
Sbjct: 56 SCRYDHKRPPLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFSVDA 115
Query: 361 SSKIPNW 367
+ IP+W
Sbjct: 116 AEFIPSW 122
>gi|17369657|sp|Q9TT91.1|MKRN1_MACEU RecName: Full=E3 ubiquitin-protein ligase makorin-1
gi|6572968|gb|AAF17489.1|AF192786_1 makorin 1 [Macropus eugenii]
Length = 478
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 13/61 (21%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G+NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 59 YFMHGVCKKGNNCRYSHDLSTSQSAMV------------CRYYQR-GCCAYGDRCRYEHT 105
Query: 116 K 116
K
Sbjct: 106 K 106
>gi|219114573|ref|XP_002176455.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402559|gb|EEC42552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDC 95
GGV A P C +++ G C G C F+H + +E++ + + DC
Sbjct: 148 GGVLDQRAVSAFPKPRKCWDFKK-GKCKMGDTCPFSHEGI--EPISIKEKIDRPSSEKDC 204
Query: 96 GYYLKTGTCKYGSTCKYHH 114
+ G C+ G TC Y H
Sbjct: 205 INWKTKGKCRKGETCPYRH 223
>gi|125560223|gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
Length = 367
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 34/146 (23%)
Query: 254 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNI---------------------- 286
C+ + C YG C F H +E +A S + ++
Sbjct: 175 CKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAA 234
Query: 287 ---GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM 343
GP+ PS IC+ + M G C FG C F H A YG L + D++
Sbjct: 235 AGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELH-KYGGGLVDIDSRDAAAT 293
Query: 344 ---NHQAISATHSIETSPDASSKIPN 366
+SA ET+ +++ +P+
Sbjct: 294 PDSKQAVVSAKAPAETTAASTTVLPH 319
>gi|413947015|gb|AFW79664.1| putative RNA helicase family protein [Zea mays]
Length = 981
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 15/80 (18%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G C+F+ G C G CRF+H + A + P C +YL C+ G
Sbjct: 725 GTQACVFFA-NGSCNLGDVCRFSHSSLAPK--------------PVCKFYLTLQGCRNGR 769
Query: 109 TCKYHHPKDRNGAGPVSFNI 128
+C Y H + PV+ I
Sbjct: 770 SCPYSHDSGSLVSAPVTSGI 789
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPL 335
+ G C GP C+F HP P+ PPL
Sbjct: 152 LVGFCIEGPNCKFMHPRFELPMGTA-EQPPL 181
>gi|114677174|ref|XP_001136016.1| PREDICTED: tristetraprolin [Pan troglodytes]
Length = 503
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 286 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 337
Query: 314 TCRFDH 319
C F H
Sbjct: 338 RCHFIH 343
>gi|417398920|gb|JAA46493.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 322
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 104 CRTFSESGRCRYGAKCQFAHGPGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 155
Query: 314 TCRFDH 319
C F H
Sbjct: 156 RCHFIH 161
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGA---QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YG+ C+F H P Q + +Y+ EL C + G C YGS
Sbjct: 104 CRTFSESGRCRYGAKCQFAHGPGELRQASRHPKYKTEL--------CHKFYLQGRCPYGS 155
Query: 109 TCKYHHPKDRNGAGPVSFNIL 129
C + H + A P ++L
Sbjct: 156 RCHFIHNPSEDLAAPGHPHVL 176
>gi|348562835|ref|XP_003467214.1| PREDICTED: tristetraprolin-like [Cavia porcellus]
Length = 535
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 323 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 374
Query: 314 TCRFDH 319
C F H
Sbjct: 375 RCHFIH 380
>gi|145474127|ref|XP_001423086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390146|emb|CAK55688.1| unnamed protein product [Paramecium tetraurelia]
Length = 141
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 246 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 305
E+ C+ ++ G+CKY +C F H + +N ++P C NY
Sbjct: 40 EEKKKTEICKNFLFKGSCKYQENCSFAHGDNELRDRVPAN---ENFKTKP----CKNYHK 92
Query: 306 YGICKFGPTCRFDH 319
+G C +G C++ H
Sbjct: 93 FGTCSYGLRCQYLH 106
>gi|111307030|gb|AAI20044.1| ZFP36 protein [Bos taurus]
gi|296477782|tpg|DAA19897.1| TPA: tristetraproline [Bos taurus]
Length = 325
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 155
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|294656855|ref|XP_459176.2| DEHA2D15928p [Debaryomyces hansenii CBS767]
gi|199431792|emb|CAG87347.2| DEHA2D15928p [Debaryomyces hansenii CBS767]
Length = 391
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C FYR+ G+C GS+C F+H G+ E+LP C Y+ K G CK+G C
Sbjct: 44 CKFYRQ-GVCQAGSSCPFSH---NFDGSLAAEKLP-------CKYFQK-GNCKFGLKCAL 91
Query: 113 HH 114
H
Sbjct: 92 AH 93
>gi|443922894|gb|ELU42246.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 477
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 239 SASSQNLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 296
S+S ++ P P+ P CRY+ + G C G C H +R + I P G
Sbjct: 242 SSSGRHPPLDPNTPAGVCRYFWSRGVCNRGTSCT--HMHQRPDSQGNNPIFPRG------ 293
Query: 297 QAICSNYSMYGICKFGPTCRFDH 319
+C + G+C G +C+F+H
Sbjct: 294 --VCRTFWTSGLCGRGASCKFEH 314
>gi|326912239|ref|XP_003202461.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Meleagris
gallopavo]
Length = 464
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
Y G+C G NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 49 LYFMHGVCKEGDNCRYSHDLSTSQSAMV------------CRYY-QRGCCAYGDHCRYEH 95
Query: 115 PK 116
K
Sbjct: 96 TK 97
>gi|390604805|gb|EIN14196.1| hypothetical protein PUNSTDRAFT_49022 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 252 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 306
P+C +Y G C G +C + HPKER + +GP P + + + +
Sbjct: 120 PECWWYAKYGYCSAGDECLYAHPKERKIECPDYRRGFCKLGPT-CPRKHIRRVACQLYLS 178
Query: 307 GICKFGPTCRFDHP 320
G C GP C HP
Sbjct: 179 GFCPMGPDCPRGHP 192
>gi|390478942|ref|XP_002762143.2| PREDICTED: tristetraprolin [Callithrix jacchus]
Length = 326
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 314 TCRFDH 319
C F H
Sbjct: 161 RCHFIH 166
>gi|301784037|ref|XP_002927428.1| PREDICTED: tristetraproline-like [Ailuropoda melanoleuca]
Length = 325
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 158
Query: 314 TCRFDH 319
C F H
Sbjct: 159 RCHFIH 164
>gi|281344081|gb|EFB19665.1| hypothetical protein PANDA_017207 [Ailuropoda melanoleuca]
Length = 318
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 100 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 151
Query: 314 TCRFDH 319
C F H
Sbjct: 152 RCHFIH 157
>gi|242052467|ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
gi|241927354|gb|EES00499.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
Length = 164
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPK 116
C ++++TGTCKYG +C+Y HPK
Sbjct: 66 CHHFVRTGTCKYGDSCRYFHPK 87
>gi|449482071|ref|XP_002197651.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Taeniopygia
guttata]
Length = 488
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 23 YFMHGVCKEGDNCRYSHDLSTSQSAMV------------CRYY-QRGCCAYGDHCRYEHT 69
Query: 116 K 116
K
Sbjct: 70 K 70
>gi|440301489|gb|ELP93875.1| hypothetical protein EIN_177620 [Entamoeba invadens IP1]
Length = 111
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA-------QYREELPERNGQPDCGYYLKTGTCK 105
C+F+ + G C G NC F+H A + Q+ +P C Y+ +TGTC+
Sbjct: 30 CVFFMQNGYCKKGENCTFSHDISAFMESHSSPPQKQFVSVDKLYRTKP-CKYFFETGTCR 88
Query: 106 YGSTCKYHH 114
G C + H
Sbjct: 89 KGKHCNFSH 97
>gi|293332510|ref|NP_001169334.1| uncharacterized protein LOC100383201 [Zea mays]
gi|224028765|gb|ACN33458.1| unknown [Zea mays]
gi|414885168|tpg|DAA61182.1| TPA: hypothetical protein ZEAMMB73_523623 [Zea mays]
Length = 607
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 28/105 (26%)
Query: 14 NQSADNIEEAIWRLKI----HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCR 69
++A+NI+ WR + H GGG+ C + +G C GS C
Sbjct: 290 KRAAENIDSQYWRYDVKRQRHGEAGGGGL--------------CFKFVSSGSCQRGSRCS 335
Query: 70 FNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ H EE E + C +L G C+ G CK+ H
Sbjct: 336 YRHD----------EEAVEHYQRNVCFDFLNKGKCERGPECKFVH 370
>gi|393907027|gb|EFO25206.2| zinc finger protein [Loa loa]
Length = 373
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 32/127 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N C+ G+ C F H + S+P + Y + G C FG
Sbjct: 15 CRYFAN-NICREGSSCPFSHDRN----------------SKPDRT--CRYYLIGKCAFGT 55
Query: 314 TCRFDH---PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSP-----DA 360
+CR+DH P G S P ++++ N + + ++ S DA
Sbjct: 56 SCRYDHKRPPLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFSVDA 115
Query: 361 SSKIPNW 367
+ IP+W
Sbjct: 116 AEFIPSW 122
>gi|403305264|ref|XP_003943187.1| PREDICTED: tristetraprolin [Saimiri boliviensis boliviensis]
Length = 332
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 314 TCRFDH 319
C F H
Sbjct: 167 RCHFIH 172
>gi|27819622|ref|NP_776918.1| tristetraprolin [Bos taurus]
gi|1717818|sp|P53781.1|TTP_BOVIN RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Protein
TIS11A; Short=TIS11; AltName: Full=Zinc finger protein
36 homolog; Short=Zfp-36
gi|1100071|gb|AAB05819.1| tristetraprolin [Bos taurus]
Length = 324
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 310
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 155
Query: 311 FGPTCRFDH 319
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|198470731|ref|XP_001355382.2| GA17935 [Drosophila pseudoobscura pseudoobscura]
gi|198145593|gb|EAL32440.2| GA17935 [Drosophila pseudoobscura pseudoobscura]
Length = 456
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERP------DQPDCRYYMNTGTCKYGADCK 270
++L+ N G++ ++ S+ LP++P CR + G CKYG C+
Sbjct: 107 ASLVTIIENLGNMNLHRKLE--RTQSEPLPQQPMNISRYKTELCRPFEEAGECKYGEKCQ 164
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
F H + L + C + G C +GP C F H
Sbjct: 165 FAH--------GFHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 205
>gi|443898685|dbj|GAC76019.1| predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 1301
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 23/116 (19%)
Query: 213 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 272
+ AG++ + ++ G A A++ S E Q C+++ + G C GA C F
Sbjct: 638 TAAGTDELVDDKDSGSALANAKL------SSKKKEALGQVPCKFFRSNG-CSAGASCPFA 690
Query: 273 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 328
H LP GQ + + G C+FG C H G P++
Sbjct: 691 HT----------------LPGDGGQKSVCQWFLKGNCRFGHKCALAHVLPGQPMSM 730
>gi|294946373|ref|XP_002785044.1| hypothetical protein Pmar_PMAR011353 [Perkinsus marinus ATCC 50983]
gi|239898436|gb|EER16840.1| hypothetical protein Pmar_PMAR011353 [Perkinsus marinus ATCC 50983]
Length = 303
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 198 GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYY 257
G NT G+ GP+ P AG ++ G Q+ I + + P R C+++
Sbjct: 153 GVNTLPGSNGPMGPPVAAGMGMM-----------GQQVSIQAPA----PRRYRTELCKHF 197
Query: 258 MNTGTCKYGADCKFHHPKERIAQSAASNI 286
M G C YG C + H E I Q A N+
Sbjct: 198 ME-GKCGYGEHCSYAHSMEEIRQHVAGNL 225
>gi|195174909|ref|XP_002028208.1| GL13141 [Drosophila persimilis]
gi|194116707|gb|EDW38750.1| GL13141 [Drosophila persimilis]
Length = 446
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 217 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERP------DQPDCRYYMNTGTCKYGADCK 270
++L+ N G++ ++ S+ LP++P CR + G CKYG C+
Sbjct: 94 ASLVTIIENLGNMNLHRKLE--RTQSEPLPQQPMNISRYKTELCRPFEEAGECKYGEKCQ 151
Query: 271 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
F H + L + C + G C +GP C F H
Sbjct: 152 FAH--------GFHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 192
>gi|428172249|gb|EKX41160.1| hypothetical protein GUITHDRAFT_42616, partial [Guillardia theta
CCMP2712]
Length = 66
Score = 38.9 bits (89), Expect = 4.9, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG--QAICSNYSMYGICKF 311
CR +M GTC++ C F H ++ + P R +C+NY G CK+
Sbjct: 6 CREFMQKGTCQFERICSFAHGRDELRS-------PFDTSKRWNYKTELCANYLKLGRCKY 58
Query: 312 GPTCRFDH 319
C F H
Sbjct: 59 MEHCLFAH 66
>gi|410730185|ref|XP_003671272.2| hypothetical protein NDAI_0G02520 [Naumovozyma dairenensis CBS 421]
gi|401780090|emb|CCD26029.2| hypothetical protein NDAI_0G02520 [Naumovozyma dairenensis CBS 421]
Length = 386
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G+C Y + C+F H + Q + +N C +LK G C YG C +
Sbjct: 287 CESFTLKGVCKYENKCQFAHGLHELQLKERSTNFRTKN----CSNWLKLGYCPYGKRCCF 342
Query: 113 HHPKD 117
H D
Sbjct: 343 RHGDD 347
>gi|156717766|ref|NP_001096423.1| zinc finger protein 36, C3H1 type-like 2 [Xenopus (Silurana)
tropicalis]
gi|306756031|sp|A4IIN5.1|TISD_XENTR RecName: Full=Zinc finger protein 36, C3H1 type-like 2
gi|134026262|gb|AAI36092.1| zfp36l2 protein [Xenopus (Silurana) tropicalis]
Length = 333
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 107 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 158
Query: 314 TCRFDH 319
C H
Sbjct: 159 RCHLIH 164
>gi|410983058|ref|XP_003997861.1| PREDICTED: tristetraprolin [Felis catus]
Length = 325
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 158
Query: 314 TCRFDH 319
C F H
Sbjct: 159 RCHFIH 164
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_b [Homo sapiens]
Length = 255
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPIN 327
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPMG 174
>gi|402905502|ref|XP_003915558.1| PREDICTED: tristetraprolin [Papio anubis]
Length = 332
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 314 TCRFDH 319
C F H
Sbjct: 167 RCHFIH 172
>gi|195059763|ref|XP_001995696.1| GH17894 [Drosophila grimshawi]
gi|193896482|gb|EDV95348.1| GH17894 [Drosophila grimshawi]
Length = 425
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 115 CRPYEEAGECKYGEKCQFAHGYHELRN--------LQRHPKYKTEYCRTFHSAGFCPYGP 166
Query: 314 TCRFDH 319
C F H
Sbjct: 167 RCHFVH 172
>gi|149051562|gb|EDM03735.1| zinc finger protein 36, C3H type-like 1 [Rattus norvegicus]
Length = 220
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|326437098|gb|EGD82668.1| mRNA 3'-end-processing protein yth1 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSA------ASNIGPLGLPSRPGQAICSNY 303
P+C ++ N G C+ G DC F H P++R A N L R +C NY
Sbjct: 94 PECHFFRNDGHCEKGKDCLFLHITPEQRRRDCAWYWRGFCKNGANCRLRHRKA-VLCPNY 152
Query: 304 SMYGICKFGPTCRFDHPYAGYPINYGLS 331
+ G C GP C+ HP P + ++
Sbjct: 153 -LVGFCPKGPDCQHMHPRWELPTSNAIN 179
>gi|37665522|dbj|BAC99018.1| Makorin1 [Seriola quinqueradiata]
Length = 418
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 17/66 (25%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+M+ G CK G +C++ H S+P IC + G C FG
Sbjct: 7 CRYFMH-GLCKEGDNCRYSHDLTN---------------SKPAAMIC-KFFQKGNCVFGD 49
Query: 314 TCRFDH 319
CRF+H
Sbjct: 50 RCRFEH 55
>gi|414885169|tpg|DAA61183.1| TPA: hypothetical protein ZEAMMB73_523623 [Zea mays]
Length = 349
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 28/105 (26%)
Query: 14 NQSADNIEEAIWRLKI----HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCR 69
++A+NI+ WR + H GGG+ C + +G C GS C
Sbjct: 32 KRAAENIDSQYWRYDVKRQRHGEAGGGGL--------------CFKFVSSGSCQRGSRCS 77
Query: 70 FNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ H A + Q RN C +L G C+ G CK+ H
Sbjct: 78 YRHDEEAVEHYQ-------RNV---CFDFLNKGKCERGPECKFVH 112
>gi|355755823|gb|EHH59570.1| hypothetical protein EGM_09710 [Macaca fascicularis]
Length = 326
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 314 TCRFDH 319
C F H
Sbjct: 161 RCHFIH 166
>gi|74204729|dbj|BAE35432.1| unnamed protein product [Mus musculus]
Length = 262
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 44 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 95
Query: 314 TCRFDH 319
C F H
Sbjct: 96 RCHFIH 101
>gi|355703539|gb|EHH30030.1| hypothetical protein EGK_10599 [Macaca mulatta]
gi|383421389|gb|AFH33908.1| tristetraprolin [Macaca mulatta]
gi|384942444|gb|AFI34827.1| tristetraprolin [Macaca mulatta]
gi|387541058|gb|AFJ71156.1| tristetraprolin [Macaca mulatta]
Length = 326
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 314 TCRFDH 319
C F H
Sbjct: 161 RCHFIH 166
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKYGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP C+F HP P+
Sbjct: 152 LVGFCPEGPACKFMHPRFELPM 173
>gi|395756908|ref|XP_002834549.2| PREDICTED: tristetraprolin-like, partial [Pongo abelii]
Length = 233
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 120 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 171
Query: 314 TCRFDH 319
C F H
Sbjct: 172 RCHFIH 177
>gi|255071919|ref|XP_002499634.1| predicted protein [Micromonas sp. RCC299]
gi|226514896|gb|ACO60892.1| predicted protein [Micromonas sp. RCC299]
Length = 177
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 291 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
LP RPG +C YS G C G C +DHP
Sbjct: 146 LPRRPGSTVCIEYSRLGGCALGAACPYDHP 175
>gi|393539038|ref|NP_003398.2| tristetraprolin [Homo sapiens]
gi|119577289|gb|EAW56885.1| zinc finger protein 36, C3H type, homolog (mouse), isoform CRA_a
[Homo sapiens]
gi|119577290|gb|EAW56886.1| zinc finger protein 36, C3H type, homolog (mouse), isoform CRA_a
[Homo sapiens]
Length = 332
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 314 TCRFDH 319
C F H
Sbjct: 167 RCHFIH 172
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP C+F HP P+
Sbjct: 152 LVGFCIEGPNCKFMHPRFELPM 173
>gi|391325207|ref|XP_003737130.1| PREDICTED: uncharacterized protein LOC100897859 [Metaseiulus
occidentalis]
Length = 395
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G+C YG C+F H + +Y+ EL C + TG C YGS
Sbjct: 59 CRPFEESGVCKYGDKCQFAHGFQELRTLTRHPKYKTEL--------CCTFHTTGLCPYGS 110
Query: 109 TCKYHHPKDRNGA 121
C + H + N A
Sbjct: 111 RCHFIHNPEENRA 123
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G CKYG C+F H + + L + +C + G+C +G
Sbjct: 59 CRPFEESGVCKYGDKCQFAHGFQELRT--------LTRHPKYKTELCCTFHTTGLCPYGS 110
Query: 314 TCRFDH 319
C F H
Sbjct: 111 RCHFIH 116
>gi|413917332|gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays]
Length = 363
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNIGPLGL------------PSRPG 296
C+ + C YG C F H +E +A S + +G G PS
Sbjct: 180 CKKFYTEEGCPYGDTCTFLHDEQSKARESVAISLSPTVGGGGYNAASANGVMVQKPSNWK 239
Query: 297 QAICSNYSMYGICKFGPTCRFDH 319
IC+ + M G C FG C F H
Sbjct: 240 TRICNKWEMTGYCPFGSKCHFAH 262
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKYGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP C+F HP P+
Sbjct: 152 LVGFCPEGPACKFMHPRFELPM 173
>gi|397482139|ref|XP_003812290.1| PREDICTED: tristetraprolin [Pan paniscus]
gi|410299430|gb|JAA28315.1| zinc finger protein 36, C3H type, homolog [Pan troglodytes]
gi|410333007|gb|JAA35450.1| zinc finger protein 36, C3H type, homolog [Pan troglodytes]
Length = 332
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 314 TCRFDH 319
C F H
Sbjct: 167 RCHFIH 172
>gi|395859716|ref|XP_003802178.1| PREDICTED: tristetraprolin [Otolemur garnettii]
Length = 328
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 111 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 162
Query: 314 TCRFDH 319
C F H
Sbjct: 163 RCHFIH 168
>gi|224005813|ref|XP_002291867.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972386|gb|EED90718.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 318
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 46 ARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCK 105
A P P C F+ RTG C S+CR++H + + + +P C ++ K G C+
Sbjct: 12 ASPARPLCQFFVRTGSCRNDSSCRWSHNIGSLSRDEALKTIP-------CPHFAK-GCCR 63
Query: 106 YGSTCKYHHPK 116
+G C+ H +
Sbjct: 64 FGDNCELKHDE 74
>gi|426388672|ref|XP_004060757.1| PREDICTED: tristetraprolin [Gorilla gorilla gorilla]
Length = 332
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 314 TCRFDH 319
C F H
Sbjct: 167 RCHFIH 172
>gi|358334285|dbj|GAA52713.1| zinc finger CCCH domain-containing protein 31 [Clonorchis sinensis]
Length = 767
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 48 PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYG 107
P + C ++ G C YG +C+F H +P++ +P C ++ + C+YG
Sbjct: 4 PEKKICRYFNTFGGCWYGDSCKFLH-------------IPDK--KPPCKFFGSSTGCRYG 48
Query: 108 STCKYHHPK 116
+C + H +
Sbjct: 49 ESCHFSHDR 57
>gi|212723490|ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea mays]
gi|194692650|gb|ACF80409.1| unknown [Zea mays]
gi|195628590|gb|ACG36125.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|224031423|gb|ACN34787.1| unknown [Zea mays]
gi|407232606|gb|AFT82645.1| C3H31 transcription factor, partial [Zea mays subsp. mays]
gi|413917333|gb|AFW57265.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
gi|413917334|gb|AFW57266.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
Length = 359
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNIGPLGL------------PSRPG 296
C+ + C YG C F H +E +A S + +G G PS
Sbjct: 180 CKKFYTEEGCPYGDTCTFLHDEQSKARESVAISLSPTVGGGGYNAASANGVMVQKPSNWK 239
Query: 297 QAICSNYSMYGICKFGPTCRFDH 319
IC+ + M G C FG C F H
Sbjct: 240 TRICNKWEMTGYCPFGSKCHFAH 262
>gi|395332863|gb|EJF65241.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 2372
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNI------GPLGLPSRPG-----QAICSN 302
CR+Y G C G+DC F H ++S S+ P G RP +C
Sbjct: 7 CRFYGKPGGCSRGSDCHFQHVDGGSSESNISSGSSRGRGAPRGGAPRPAIPRAPHGVCDF 66
Query: 303 YSMYGICKFGPTCRFDH 319
Y G C G CRF H
Sbjct: 67 YYSRGFCNRGSDCRFRH 83
>gi|15227112|ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis
thaliana]
gi|75317978|sp|O22243.2|C3H31_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 31;
Short=AtC3H31
gi|3738282|gb|AAC63624.1| putative ATP-dependent RNA helicase A [Arabidopsis thaliana]
gi|225898609|dbj|BAH30435.1| hypothetical protein [Arabidopsis thaliana]
gi|330255781|gb|AEC10875.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis
thaliana]
Length = 1015
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 15/111 (13%)
Query: 8 KSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSN 67
++NA+A A I+E + ++ G G + Y P C+++ G C G
Sbjct: 688 QANAIAENMASIIKEIRTQCTPSESDNGHGALEPEDYVEYGEAPVCVYFL-NGYCNRGGQ 746
Query: 68 CRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
C F H ++ +P C ++ + C+ G +C + H R
Sbjct: 747 CTFTHTL--------------QSTRPACKFFASSQGCRNGESCLFSHAMRR 783
>gi|136471|sp|P26651.1|TTP_HUMAN RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=G0/G1
switch regulatory protein 24; AltName: Full=Growth
factor-inducible nuclear protein NUP475; AltName:
Full=Protein TIS11A; Short=TIS11; AltName: Full=Zinc
finger protein 36 homolog; Short=Zfp-36
gi|183443|gb|AAA58489.1| zinc finger transcriptional regulator [Homo sapiens]
gi|183445|gb|AAC37600.1| zinc finger transcriptional regulator [Homo sapiens]
gi|340013|gb|AAA61240.1| tristetraproline [Homo sapiens]
gi|16307209|gb|AAH09693.1| Zinc finger protein 36, C3H type, homolog (mouse) [Homo sapiens]
gi|54112078|gb|AAV28731.1| zinc finger protein 36, C3H type, homolog (mouse) [Homo sapiens]
gi|167773617|gb|ABZ92243.1| zinc finger protein 36, C3H type, homolog (mouse) [synthetic
construct]
gi|189054231|dbj|BAG36751.1| unnamed protein product [Homo sapiens]
gi|190690135|gb|ACE86842.1| zinc finger protein 36, C3H type, homolog (mouse) protein
[synthetic construct]
gi|190691509|gb|ACE87529.1| zinc finger protein 36, C3H type, homolog (mouse) protein
[synthetic construct]
Length = 326
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 314 TCRFDH 319
C F H
Sbjct: 161 RCHFIH 166
>gi|281204195|gb|EFA78391.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 664
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+ ++ +C YG CK+ H ++ + ++G C Y YG CK+G
Sbjct: 117 CQVFLKEKSCPYGDSCKYSHDLQKYLSTKQPSLGK-----------CYLYETYGECKYGI 165
Query: 314 TCRF--DH 319
C F DH
Sbjct: 166 KCLFGGDH 173
>gi|164657462|ref|XP_001729857.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
gi|159103751|gb|EDP42643.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
Length = 500
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 16/105 (15%)
Query: 243 QNLPERPDQPD-CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI-- 299
Q ER P C YY TGTC+ G C F H +R A + P G PG +
Sbjct: 226 QRALERAKTPQLCTYYTRTGTCRRGTQCPFIHDDQRKALCPGV-LKPSGCVLPPGTCLLS 284
Query: 300 ----------CSNYSMYGICKFGPTCRFDHPYAGY--PINYGLSL 332
C ++ C+ G C F H + P+ +L
Sbjct: 285 HTRCPQNVPHCVHFLRLHSCRNGDACAFTHAQVAHDAPVCRAFAL 329
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I + GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDARFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|307199310|gb|EFN79963.1| Makorin-1 [Harpegnathos saltator]
Length = 398
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CRY+ N G C+ G +C+F H + + +N S P + + GIC+FG
Sbjct: 11 CRYFKN-GVCREGNNCRFRHVQGTRDDADVNNAETTS--SGPIFNVTCRFFKQGICRFGN 67
Query: 314 TCRFDH 319
C F H
Sbjct: 68 QCHFRH 73
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 118 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 175
Query: 305 MYGICKFGPTCRFDHPYAGYPIN 327
+ G C GP+C+F HP P+
Sbjct: 176 LVGFCPEGPSCKFMHPRFELPMG 198
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Taeniopygia guttata]
Length = 243
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP C+F HP P+
Sbjct: 152 LVGFCPEGPACKFMHPRFELPM 173
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Canis lupus familiaris]
Length = 244
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|255726072|ref|XP_002547962.1| predicted protein [Candida tropicalis MYA-3404]
gi|240133886|gb|EER33441.1| predicted protein [Candida tropicalis MYA-3404]
Length = 499
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G C FYR+ G+C G+ C F+H A GA +++P C Y+ K G CK+G
Sbjct: 95 GHVPCKFYRQ-GICQAGNTCPFSHNLDGALGA---DKVP-------CKYFQK-GNCKFGL 142
Query: 109 TCKYHH 114
C H
Sbjct: 143 KCALAH 148
>gi|256052756|ref|XP_002569918.1| zinc finger protein [Schistosoma mansoni]
gi|353232204|emb|CCD79559.1| putative zinc finger protein [Schistosoma mansoni]
Length = 273
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 16/71 (22%)
Query: 254 CRYYMNT--GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP---GQAICSNYSMYGI 308
C+ Y+N+ G C YG C+F H I L R IC +Y ++G
Sbjct: 140 CKRYLNSSNGDCSYGNKCQFAHG-----------INELRFAPRHPRYKTEICYSYHVFGT 188
Query: 309 CKFGPTCRFDH 319
C +G C F H
Sbjct: 189 CNYGKRCDFIH 199
>gi|156376344|ref|XP_001630321.1| predicted protein [Nematostella vectensis]
gi|156217339|gb|EDO38258.1| predicted protein [Nematostella vectensis]
Length = 752
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 250 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 290
D P CRYY+ C +GA+C + HP++ IA N+GP+
Sbjct: 45 DVPVCRYYLE-DRCMFGAECWYRHPEQDIA-----NVGPMA 79
>gi|353234687|emb|CCA66709.1| hypothetical protein PIIN_00389 [Piriformospora indica DSM 11827]
Length = 380
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 14/76 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-------------REELPERNGQPDCGYY 98
C F+ RTGLC G +CR+ H P A ++ P N P C ++
Sbjct: 161 CPFFSRTGLCNRGKSCRYQHDPEKVAICPRFLTGDCPSSAENCLLSHSPTLNRVPPCVHF 220
Query: 99 LKTGTCKYGSTCKYHH 114
G CK G C Y H
Sbjct: 221 QNNGRCKNGDKCVYPH 236
>gi|254584178|ref|XP_002497657.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
gi|238940550|emb|CAR28724.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
Length = 342
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + GTC+YG C+F H + N ++P C N++ G C +G
Sbjct: 246 CESFTTKGTCRYGNKCQFAHGLSELKFRQFGN----NFRTKP----CINWTKLGYCPYGK 297
Query: 314 TCRFDH 319
C F H
Sbjct: 298 RCCFKH 303
>gi|341877927|gb|EGT33862.1| hypothetical protein CAEBREN_04146 [Caenorhabditis brenneri]
Length = 444
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 19/67 (28%)
Query: 253 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
DCRYY+N G C G C F H + AA N + +C ++M G C FG
Sbjct: 7 DCRYYVN-GICSKGNACAFIHDQ------AARN-----------EYVCQ-FNMAGKCSFG 47
Query: 313 PTCRFDH 319
CRF H
Sbjct: 48 QACRFKH 54
>gi|395738149|ref|XP_003780757.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 4 [Pongo abelii]
Length = 171
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNY 303
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 40 MPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY 98
Query: 304 SMYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 99 -LVGFCPEGPSCKFMHPRFELPM 120
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|344231854|gb|EGV63733.1| hypothetical protein CANTEDRAFT_113770 [Candida tenuis ATCC 10573]
Length = 235
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C +M C YG C+F H + + + + PS C+N+S +G C++G
Sbjct: 176 CGSFMKNSYCPYGNKCQFAHGECELKR--------VERPSNWRSKPCANWSRFGSCRYGN 227
Query: 314 TCRFDH 319
C F H
Sbjct: 228 RCCFKH 233
>gi|449680209|ref|XP_002153918.2| PREDICTED: uncharacterized protein LOC100206476 [Hydra
magnipapillata]
Length = 492
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 20/90 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
CLFY R G C G NC + H PE+ C +L+ GTCK C +
Sbjct: 153 CLFYSRFGKCKRGENCHYIHD-------------PEKVAV--CTRFLR-GTCK-DKNCIF 195
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPY 142
H D N S+ +LG R CPY
Sbjct: 196 SHKFDPNKMPVCSYFLLGQCTRD---KCPY 222
>gi|449269472|gb|EMC80235.1| E3 ubiquitin-protein ligase makorin-1, partial [Columba livia]
Length = 420
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 13/61 (21%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G NCR++H Q A C YY + G C YG C+Y H
Sbjct: 2 YFMHGVCKEGDNCRYSHDLSTGQSAMV------------CRYYQR-GCCAYGDRCRYEHT 48
Query: 116 K 116
K
Sbjct: 49 K 49
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_c [Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Otolemur garnettii]
Length = 244
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|169790769|ref|NP_001116070.1| probable E3 ubiquitin-protein ligase makorin-2 [Xenopus laevis]
gi|150416784|gb|ABR68861.1| makorin-2 [Xenopus laevis]
Length = 408
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 21/86 (24%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
P Q CRY+++ G C+ G+ C F H +A S S + + + G
Sbjct: 3 PKQVTCRYFLH-GVCREGSRCLFSHD---LATSKPSTV--------------CRFFLRGQ 44
Query: 309 CKFGPTCRFDHPYAGYPINYGLSLPP 334
C +G CR+DH P N + +PP
Sbjct: 45 CAYGTRCRYDHV---KPCNGTVFIPP 67
>gi|145548375|ref|XP_001459868.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427695|emb|CAK92471.1| unnamed protein product [Paramecium tetraurelia]
Length = 134
Score = 38.5 bits (88), Expect = 6.9, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+Y+ C YG C F H +E++ +P C N+ + CK+G
Sbjct: 30 CKYWTEGKICPYGNKCYFAHGEEQLLSK--------DVPKNYRTKECKNFQEF-FCKYGQ 80
Query: 314 TCRFDHPYAGY 324
C+F H Y
Sbjct: 81 RCQFSHMLTKY 91
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_d [Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|902735|emb|CAA60414.1| Lee1p [Saccharomyces cerevisiae]
Length = 301
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 177 QGTQSYMPLIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
+ +QS ++ S Q P +N N+ LS G+ L +SSR Q + +
Sbjct: 19 RNSQSANEMLASQIQDFQNIPRSFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIME--HL 75
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
I +SQ + P C+++ G C+ G+ C F H + I S+A+N LP +
Sbjct: 76 LITKNNSQQQKDYSHVP-CKFF-KMGNCQAGSSCPFSHSPDII--SSANN-----LPCK- 125
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QAISATH 352
Y G CKFG C H G+ +N S P+ I S N+ A SA+
Sbjct: 126 -------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHARSASF 175
Query: 353 SIETSP--DASSKIPNWVQNSDAVSVQH 378
S TSP A ++ + N++ S Q+
Sbjct: 176 STYTSPPLSAQTEFSHSASNANFFSSQY 203
>gi|301103518|ref|XP_002900845.1| makorin-like protein [Phytophthora infestans T30-4]
gi|262101600|gb|EEY59652.1| makorin-like protein [Phytophthora infestans T30-4]
Length = 281
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 242 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 301
S+++ P CR+Y+ G C+YG+ C F H AS+ GL + C
Sbjct: 2 SESVAAAPTTALCRFYV-LGKCRYGSCCTFSHTLPSQVNECASD-ETAGLSAAAALVDCP 59
Query: 302 NYSMYGICKFGPTCRFDH 319
Y + G CK+G CR H
Sbjct: 60 FY-LRGNCKYGDHCRLRH 76
>gi|54804|emb|CAA32807.1| unnamed protein product [Mus musculus]
Length = 183
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 53 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 104
Query: 314 TCRFDH 319
C F H
Sbjct: 105 RCHFIH 110
>gi|432090696|gb|ELK24036.1| Tristetraprolin [Myotis davidii]
Length = 320
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q++ + C + + G C +G
Sbjct: 103 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTEFCHKFYLQGRCPYGS 154
Query: 314 TCRFDH 319
C F H
Sbjct: 155 RCHFIH 160
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|410900360|ref|XP_003963664.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like
[Takifugu rubripes]
Length = 419
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G+CKYG C+F H + L + C + G C +GP
Sbjct: 135 CRPFEESGSCKYGEKCQFAH--------GFHELRSLSRHPKYKTEPCRTFHTIGFCPYGP 186
Query: 314 TCRFDH 319
C F H
Sbjct: 187 RCHFIH 192
>gi|291389990|ref|XP_002711511.1| PREDICTED: zinc finger protein 36, C3H type, homolog [Oryctolagus
cuniculus]
Length = 305
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 88 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 139
Query: 314 TCRFDH 319
C F H
Sbjct: 140 RCHFIH 145
>gi|260796101|ref|XP_002593043.1| hypothetical protein BRAFLDRAFT_120702 [Branchiostoma floridae]
gi|229278267|gb|EEN49054.1| hypothetical protein BRAFLDRAFT_120702 [Branchiostoma floridae]
Length = 1736
Score = 38.1 bits (87), Expect = 7.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
GA RE ER+ P C Y+++ G C +G+TC++ HP ++ +G
Sbjct: 53 GAARRERSGERSSDP-CKYWVQDGQCPFGNTCRFVHPTSQSPSG 95
>gi|119604356|gb|EAW83950.1| makorin, ring finger protein, 1, isoform CRA_b [Homo sapiens]
Length = 258
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH----------------DLSDSPYSVVC-KYFQRGYCI 99
Query: 311 FGPTCRFDH 319
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|444732084|gb|ELW72403.1| Tristetraprolin [Tupaia chinensis]
Length = 377
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 162 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 213
Query: 314 TCRFDH 319
C F H
Sbjct: 214 RCHFIH 219
>gi|168052362|ref|XP_001778619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669937|gb|EDQ56514.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 254 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 312
CRY+ +GTC +G C F H+P +R A + +P R + C + G CK
Sbjct: 38 CRYWATSGTCFFGDQCNFAHNPADRAATGKS-------VPKR--EKACKELLLTGYCKNE 88
Query: 313 PT-CRFDHPYAGY 324
C ++H G
Sbjct: 89 KNGCEYNHEIPGV 101
>gi|357144905|ref|XP_003573455.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 363
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 20/105 (19%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQ-------------------SAASNIGPLGLPSR 294
C+ + C YG C F H ++ A+ +AA+N + PS
Sbjct: 182 CKKFYTEEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGSYSSPTAAANGPTILKPSN 241
Query: 295 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILD 339
IC+ + M G C FG C F H A NYG L + D
Sbjct: 242 WKTRICNKWEMTGYCPFGSKCHFAHGAAELH-NYGGGLVDIDGRD 285
>gi|348529734|ref|XP_003452368.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like
[Oreochromis niloticus]
Length = 419
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + C + G C +GP
Sbjct: 134 CRPFEENGSCKYGEKCQFAHGYHELRS--------LSRHPKYKTEPCRTFHTIGFCPYGP 185
Query: 314 TCRFDH 319
C F H
Sbjct: 186 RCHFIH 191
>gi|221272069|sp|B0F0H3.2|MKRN2_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
Length = 409
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 21/86 (24%)
Query: 249 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 308
P Q CRY+++ G C+ G+ C F H +A S S + + + G
Sbjct: 3 PKQVTCRYFLH-GVCREGSRCLFSHD---LATSKPSTV--------------CRFFLRGQ 44
Query: 309 CKFGPTCRFDHPYAGYPINYGLSLPP 334
C +G CR+DH P N + +PP
Sbjct: 45 CAYGTRCRYDH---VKPCNGTVFIPP 67
>gi|224013888|ref|XP_002296608.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968960|gb|EED87304.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 471
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 36 GGVAQASPYPARPGEPD-----CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
GG A + GE C +++ G C G C F+H ++E +
Sbjct: 218 GGCAANKVSDGKDGESKNAVQKCFSFKKKGKCKLGDKCPFSHDVIKKSDDAEKKEATDAK 277
Query: 91 G-------QPDCGYYLKTGTCKYGSTCKYHH 114
G Q DC + G C+ G C + H
Sbjct: 278 GNNKRDKAQKDCINWKNKGKCRKGDKCPFRH 308
>gi|6325203|ref|NP_015271.1| Lee1p [Saccharomyces cerevisiae S288c]
gi|51701649|sp|Q02799.1|LEE1_YEAST RecName: Full=Zinc finger protein LEE1
gi|1079688|gb|AAB68311.1| Lee1p [Saccharomyces cerevisiae]
gi|51013597|gb|AAT93092.1| YPL054W [Saccharomyces cerevisiae]
gi|190407896|gb|EDV11161.1| zinc finger protein LEE1 [Saccharomyces cerevisiae RM11-1a]
gi|207340508|gb|EDZ68838.1| YPL054Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285815484|tpg|DAA11376.1| TPA: Lee1p [Saccharomyces cerevisiae S288c]
gi|392295955|gb|EIW07058.1| Lee1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 301
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 177 QGTQSYMPLIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
+ +QS ++ S Q P +N N+ LS G+ L +SSR Q + +
Sbjct: 19 RNSQSANEMLASQIQDFQNIPRSFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIME--HL 75
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
I +SQ + P C+++ G C+ G+ C F H + I S+A+N LP +
Sbjct: 76 LITKNNSQQQKDYSHVP-CKFFK-MGNCQAGSSCPFSHSPDII--SSANN-----LPCK- 125
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QAISATH 352
Y G CKFG C H G+ +N S P+ I S N+ A SA+
Sbjct: 126 -------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHARSASF 175
Query: 353 SIETSP--DASSKIPNWVQNSDAVSVQH 378
S TSP A ++ + N++ S Q+
Sbjct: 176 STYTSPPLSAQTEFSHSASNANYFSSQY 203
>gi|332867116|ref|XP_001137528.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 4 [Pan troglodytes]
gi|397489496|ref|XP_003815762.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Pan paniscus]
Length = 191
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|323331246|gb|EGA72664.1| Lee1p [Saccharomyces cerevisiae AWRI796]
Length = 301
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 177 QGTQSYMPLIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 235
+ +QS ++ S Q P +N N+ LS G+ L +SSR Q + +
Sbjct: 19 RNSQSANEMLASQIQDFQNIPRSFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIME--HL 75
Query: 236 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 295
I +SQ + P C+++ G C+ G+ C F H + I S+A+N LP +
Sbjct: 76 LITKNNSQQQKDYSHVP-CKFFK-MGNCQAGSSCPFSHSPDII--SSANN-----LPCK- 125
Query: 296 GQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QAISATH 352
Y G CKFG C H G+ +N S P+ I S N+ A SA+
Sbjct: 126 -------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHARSASF 175
Query: 353 SIETSP--DASSKIPNWVQNSDAVSVQH 378
S TSP A ++ + N++ S Q+
Sbjct: 176 STYTSPPLSAQTEFSHSASNANYFSSQY 203
>gi|323305506|gb|EGA59248.1| Cth1p [Saccharomyces cerevisiae FostersB]
gi|323338249|gb|EGA79481.1| Cth1p [Saccharomyces cerevisiae Vin13]
gi|323349278|gb|EGA83506.1| Cth1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355682|gb|EGA87499.1| Cth1p [Saccharomyces cerevisiae VL3]
gi|365766632|gb|EHN08128.1| Cth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 209 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 260
Query: 314 TCRFDH 319
C F H
Sbjct: 261 RCCFKH 266
>gi|6320355|ref|NP_010435.1| Cth1p [Saccharomyces cerevisiae S288c]
gi|52788259|sp|P47976.2|CTH1_YEAST RecName: Full=mRNA decay factor CTH1; AltName:
Full=Cysteine-three-histidine protein 1
gi|899400|emb|CAA90373.1| unknown [Saccharomyces cerevisiae]
gi|45269273|gb|AAS56016.1| YDR151C [Saccharomyces cerevisiae]
gi|151942135|gb|EDN60491.1| CCCH zinc finger protein [Saccharomyces cerevisiae YJM789]
gi|190404893|gb|EDV08160.1| zinc finger protein CTH1 [Saccharomyces cerevisiae RM11-1a]
gi|256269333|gb|EEU04635.1| Cth1p [Saccharomyces cerevisiae JAY291]
gi|259145391|emb|CAY78655.1| Cth1p [Saccharomyces cerevisiae EC1118]
gi|285811169|tpg|DAA11993.1| TPA: Cth1p [Saccharomyces cerevisiae S288c]
Length = 325
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 314 TCRFDH 319
C F H
Sbjct: 262 RCCFKH 267
>gi|34784575|gb|AAH57067.1| Cpsf4 protein [Mus musculus]
Length = 159
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNY 303
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 40 MPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY 98
Query: 304 SMYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 99 -LVGFCPEGPSCKFMHPRFELPM 120
>gi|1020083|gb|AAB39897.1| zinc finger protein [Saccharomyces cerevisiae]
Length = 325
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 314 TCRFDH 319
C F H
Sbjct: 262 RCCFKH 267
>gi|349577214|dbj|GAA22383.1| K7_Cth1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300264|gb|EIW11355.1| Cth1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 325
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 314 TCRFDH 319
C F H
Sbjct: 262 RCCFKH 267
>gi|426357078|ref|XP_004045875.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Gorilla gorilla gorilla]
gi|221043738|dbj|BAH13546.1| unnamed protein product [Homo sapiens]
Length = 191
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|449435870|ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Cucumis sativus]
gi|449489882|ref|XP_004158448.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Cucumis sativus]
Length = 606
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 14/68 (20%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C + ++G+C G C FHH + QS + +C ++ G C+ GP
Sbjct: 316 CFKFTSSGSCPRGEKCNFHHDMDAREQSQ--------------RGVCFDFLNKGKCERGP 361
Query: 314 TCRFDHPY 321
C F H +
Sbjct: 362 DCNFKHSF 369
>gi|31580864|dbj|BAC77536.1| makorin ring-zinc-finger protein [Pisum sativum]
Length = 82
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 15/68 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD----CGYYLKTGTCKYGS 108
C FY R G+C G C F+H R++ +R P C YY K G+C Y S
Sbjct: 6 CKFYAR-GICLKGDQCDFSHQ---------RKDTHQRKDNPVDKQICSYYQK-GSCAYDS 54
Query: 109 TCKYHHPK 116
C+Y H K
Sbjct: 55 RCRYKHVK 62
>gi|449329780|gb|AGE96049.1| zinc finger protein [Encephalitozoon cuniculi]
Length = 346
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 26/125 (20%)
Query: 8 KSNAVANQSAD--NIEEAIW--RLKIHDNQEGGGVAQASPYPARPGEPD----------C 53
++N ++N S N E+ ++ R K HD++ AQ P R + C
Sbjct: 59 QNNTISNLSTSLANKEQGLFEKRQKAHDSRASTNAAQNYPLSGRGSHANKKYQLYKTEMC 118
Query: 54 LFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGST 109
+ G C YG C+F H Y + +Y+ E C + + G+C YG
Sbjct: 119 RSHTEIGYCRYGDKCQFAHSKAELRYVQRHPKYKTET--------CKTFWEEGSCPYGKR 170
Query: 110 CKYHH 114
C + H
Sbjct: 171 CCFIH 175
>gi|2687591|gb|AAC53567.1| clipper/cleavage and polyadenylation specificity factor 30 kDa
subunit homolog [Mus musculus]
Length = 208
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 81 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 138
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 139 LVGFCPEGPSCKFMHPRFELPM 160
>gi|255081837|ref|XP_002508137.1| predicted protein [Micromonas sp. RCC299]
gi|226523413|gb|ACO69395.1| predicted protein [Micromonas sp. RCC299]
Length = 314
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
++EGGG P G P C ++R G C G +CRF+H A A+ P+++
Sbjct: 212 HEEGGG---GDSRPPSRGAPICYAFQR-GECDRGDSCRFSHDANAS--------TPQKSS 259
Query: 92 QPDCGYYLKTGTCKYGSTCKYHH 114
P Y + G C G C++ H
Sbjct: 260 AP--CYAFQKGECTRGDACRFSH 280
>gi|71017815|ref|XP_759138.1| hypothetical protein UM02991.1 [Ustilago maydis 521]
gi|46098930|gb|EAK84163.1| hypothetical protein UM02991.1 [Ustilago maydis 521]
Length = 1363
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
Query: 29 IHDNQEGGGVAQA---SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE 85
+ D G +A A S G+ C F+R G C G++C F H
Sbjct: 667 VDDKDTGSALANAKLSSKKKEALGQVPCKFFRSNG-CSAGASCPFAH------------T 713
Query: 86 LPERNGQPD-CGYYLKTGTCKYGSTCKYHH 114
LP GQ C ++LK G+C++G C H
Sbjct: 714 LPGDGGQKSVCQWFLK-GSCRFGHKCALAH 742
>gi|294892295|ref|XP_002773992.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
gi|239879196|gb|EER05808.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
Length = 274
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 14/64 (21%)
Query: 51 PDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTC 110
P C FY R G C G C+F+H EE+ +P C +++K G CK G TC
Sbjct: 28 PACHFYAR-GRCRNGDTCKFSHA----------EEVV--AAKPVCHFFVK-GECKNGDTC 73
Query: 111 KYHH 114
++ H
Sbjct: 74 RFLH 77
>gi|149034886|gb|EDL89606.1| rCG42591, isoform CRA_a [Rattus norvegicus]
Length = 199
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 304
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 62 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 119
Query: 305 MYGICKFGPTCRFDHPYAGYPI 326
+ G C GP+C+F HP P+
Sbjct: 120 LVGFCPEGPSCKFMHPRFELPM 141
>gi|351712194|gb|EHB15113.1| tRNA-dihydrouridine synthase 3-like protein [Heterocephalus glaber]
Length = 645
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
Query: 261 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 320
G C +G C+F H R +S ++GP C + +G C +G TCRF
Sbjct: 128 GQCFFGDRCRFLHDVGRYLESKPPDLGP----------HCVLFETFGRCPYGVTCRFAGA 177
Query: 321 YAG---------YPINYGLSLPPL-SILDSSLMNH 345
+ G + YG PPL + LD +L
Sbjct: 178 HLGPEGQNLVREELLAYGAHPPPLRNGLDKALQQQ 212
>gi|348673356|gb|EGZ13175.1| hypothetical protein PHYSODRAFT_316572 [Phytophthora sojae]
Length = 634
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR ++ G C+YG CK++HP A + P + + P +C ++S G C G
Sbjct: 88 CRGFI-AGICRYGDLCKYYHP-------AGPVVVPPEIQAIPSSRLCRHFS-RGSCAQGS 138
Query: 314 TCRFDH 319
C+F H
Sbjct: 139 ECKFAH 144
>gi|320165321|gb|EFW42220.1| zinc finger protein [Capsaspora owczarzaki ATCC 30864]
Length = 184
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 23/77 (29%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
+ DC +Y G C++GA CK H K + IC+NY + G C
Sbjct: 122 KKDCPWYAR-GFCRHGAQCKLRHRK---------------------RVICTNY-LTGFCP 158
Query: 311 FGPTCRFDHPYAGYPIN 327
GPTC+F HP P+
Sbjct: 159 DGPTCQFAHPSWDIPMR 175
>gi|46309479|ref|NP_996938.1| butyrate response factor 2 [Danio rerio]
gi|42542610|gb|AAH66478.1| Zgc:76924 [Danio rerio]
Length = 310
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G+CKYG C+F H + L + C + G C +GP
Sbjct: 60 CRPFEENGSCKYGEKCQFAHGYHELRN--------LSRHPKYKTEPCRTFHTIGFCPYGP 111
Query: 314 TCRFDH 319
C F H
Sbjct: 112 RCHFIH 117
>gi|255080914|ref|XP_002504023.1| predicted protein [Micromonas sp. RCC299]
gi|226519290|gb|ACO65281.1| predicted protein [Micromonas sp. RCC299]
Length = 227
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 19/66 (28%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+YYM+ G C GA C+F H + P +C+ Y + G C +G
Sbjct: 6 CKYYMH-GACNKGAACRFSHDIQA-----------------PKSTVCT-YYLAGNCSYGD 46
Query: 314 TCRFDH 319
CR+DH
Sbjct: 47 KCRYDH 52
>gi|346320383|gb|EGX89984.1| spindle poison sensitivity protein Scp3, putative [Cordyceps
militaris CM01]
Length = 805
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 36/131 (27%)
Query: 216 GSNLIYSSRNQGDLGAGAQMHILSASSQ------NLPE---RPDQPD-------CRYYMN 259
G+ L++ R G G + LSA+ Q +LP RP P C++Y
Sbjct: 228 GAALVFFCRASGQAGQHSAHPALSATDQLPTRYPSLPRLVCRPRAPRAYTAHVPCKFYRQ 287
Query: 260 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 319
G C+ G C F H LG+ S + +C Y G CKFGP C H
Sbjct: 288 -GACQAGNACPFSHE--------------LGVAS---ETVC-KYFAKGNCKFGPKCANMH 328
Query: 320 PY-AGYPINYG 329
G +NYG
Sbjct: 329 VLPDGRRVNYG 339
>gi|322708153|gb|EFY99730.1| CCCH zinc finger domain protein [Metarhizium anisopliae ARSEF 23]
Length = 576
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 298 AICSNYSMYGICKFGPTCRFDHPYAG 323
AIC Y G CKFG TCRF+HP AG
Sbjct: 2 AICKFYQQ-GYCKFGNTCRFEHPDAG 26
>gi|194763985|ref|XP_001964112.1| GF21384 [Drosophila ananassae]
gi|190619037|gb|EDV34561.1| GF21384 [Drosophila ananassae]
Length = 470
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H + L + C + G C +GP
Sbjct: 143 CRPFEEAGECKYGEKCQFAHGFHELRN--------LQRHPKYKTEYCRTFHSVGFCPYGP 194
Query: 314 TCRFDH 319
C F H
Sbjct: 195 RCHFVH 200
>gi|31615566|pdb|1M9O|A Chain A, Nmr Structure Of The First Zinc Binding Domain Of
Nup475TTPTIS11
Length = 77
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR Y +G C+YGA C+F H + + +N P + +C + + G C +G
Sbjct: 15 CRTYSESGRCRYGAKCQFAHG---LGELRQANRHP-----KYKTELCHKFKLQGRCPYGS 66
Query: 314 TCRFDH 319
C F H
Sbjct: 67 RCHFIH 72
>gi|241951540|ref|XP_002418492.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis
CD36]
gi|223641831|emb|CAX43793.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis
CD36]
Length = 216
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASN-----IGPLGLPSRPGQAICSNYS 304
P+C +Y G C ++C + H P+ +I + N GP + +C Y
Sbjct: 97 PECLFYSKNGYCTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHVRRVLCPLY- 155
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSS 341
+YG C GP C F HP + N L + P +++ +
Sbjct: 156 LYGFCPKGPECEFTHPKFDFH-NLNLRIRPDNLIQMT 191
>gi|387016832|gb|AFJ50535.1| e3 ubiquitin-protein ligase makorin-1-like [Crotalus adamanteus]
Length = 413
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 18/79 (22%)
Query: 35 GGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD 94
GGG QAS P P F R G C +G NCRF+H + Q +
Sbjct: 8 GGGARQASKRPGSSRIPCRNFAR--GTCRWGQNCRFSHDRKSTQICR------------- 52
Query: 95 CGYYLKTGTCKYGSTCKYH 113
Y + G C YG C Y
Sbjct: 53 ---YFQNGFCGYGDCCCYQ 68
>gi|299116022|emb|CBN76022.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 411
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ-PDCGYYLKTGTCKYGSTCKYHH 114
+G C +G +C F+H +R+G+ P C ++ K G+C+YG CK+ H
Sbjct: 35 SGKCKFGDSCTFSHD--------------QRDGRLPVCSFFEKNGSCRYGGDCKFLH 77
>gi|68486577|ref|XP_712839.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|68486632|ref|XP_712810.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|74584839|sp|Q59T36.1|YTH1_CANAL RecName: Full=mRNA 3'-end-processing protein YTH1
gi|46434225|gb|EAK93641.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|46434255|gb|EAK93670.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|238882336|gb|EEQ45974.1| protein YTH1 [Candida albicans WO-1]
Length = 215
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 252 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASN-----IGPLGLPSRPGQAICSNYS 304
P+C +Y G C ++C + H P+ +I + N GP + +C Y
Sbjct: 97 PECLFYSKNGYCTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHVRRVLCPLY- 155
Query: 305 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 338
+YG C GP C F HP + N L + P +++
Sbjct: 156 LYGFCPKGPECEFTHPKFDFH-NLNLRIRPDNLI 188
>gi|71834630|ref|NP_001025418.1| zinc finger protein 36, C3H type, homolog [Danio rerio]
gi|66911936|gb|AAH97188.1| Zgc:114130 [Danio rerio]
Length = 329
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + G CKYG C+F H E + L + C + G C +G
Sbjct: 81 CRTFAERGLCKYGGKCQFAHGPEELRD--------LNRHPKYKTEPCRTFHSIGFCPYGI 132
Query: 314 TCRFDH 319
C F H
Sbjct: 133 RCHFVH 138
>gi|426249713|ref|XP_004018594.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 [Ovis
aries]
Length = 416
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 251 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 310
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGCCA 46
Query: 311 FGPTCRFDH 319
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|443899276|dbj|GAC76607.1| predicted metal-dependent hydrolase [Pseudozyma antarctica T-34]
Length = 407
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 311
CR + G C YG C++ H +E + + LP P C + +YG C +
Sbjct: 319 CRNWEERGKCLYGNRCQYAHGEEELRR----------LPRDPRWKTRPCKVFMLYGHCPY 368
Query: 312 GPTCRFDHPYAGYP 325
C F H G P
Sbjct: 369 ASRCCFRHDQGGVP 382
>gi|413947046|gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
Length = 166
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
C ++++TG CKYG +C+Y HPK NG P
Sbjct: 66 CHHFVRTGACKYGDSCRYFHPKP-NGVNPA 94
>gi|403345758|gb|EJY72260.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 296
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQS-----AASNIGPLGLP-SRPGQAICSNYSMY- 306
C+++M T C GA C F H + + ++ + + +P + C + +
Sbjct: 62 CKHFMQTKHCHVGAKCHFAHGEHELRKADDALPIEQTMKMMNIPYNNYKTQTCKYFELSG 121
Query: 307 GICKFGPTCRFDH-------PYAGYPIN 327
G CKFG C F H PY P+N
Sbjct: 122 GNCKFGKNCSFAHGGFELRNPYDAVPLN 149
>gi|384247317|gb|EIE20804.1| hypothetical protein COCSUDRAFT_9841, partial [Coccomyxa
subellipsoidea C-169]
Length = 62
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
CR + +G+C+YG+ C+F H + P+ + C ++ G C +G
Sbjct: 5 CRSWKESGSCRYGSKCQFAH--------GEKELKPVQRHPKYKTEPCRQFATTGACPYGS 56
Query: 314 TCRFDH 319
CRF H
Sbjct: 57 RCRFIH 62
>gi|170105044|ref|XP_001883735.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641370|gb|EDR05631.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 629
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 254 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 313
C+YY + C G CKF H +E N+ PL P QA Y +G CK G
Sbjct: 15 CKYYNSPRGCFSGDSCKFLHGEE-----PGQNVQPLLTPY--DQAKQCRYYQHGFCKRGE 67
Query: 314 TCRFDH 319
C F H
Sbjct: 68 LCWFKH 73
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,486,555,485
Number of Sequences: 23463169
Number of extensions: 336480882
Number of successful extensions: 571577
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 1046
Number of HSP's that attempted gapping in prelim test: 558842
Number of HSP's gapped (non-prelim): 7823
length of query: 416
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 271
effective length of database: 8,957,035,862
effective search space: 2427356718602
effective search space used: 2427356718602
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)