Query 014918
Match_columns 416
No_of_seqs 321 out of 1340
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 03:27:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014918.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014918hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m9oa_ g.66.1.1 (A:) Tristetr 98.4 5.3E-08 3.9E-12 67.2 3.5 34 247-280 5-38 (40)
2 d1rgoa1 g.66.1.1 (A:151-186) B 98.4 2.6E-08 1.9E-12 67.3 1.1 33 248-280 3-35 (36)
3 d1rgoa2 g.66.1.1 (A:187-220) B 98.3 5.8E-08 4.2E-12 64.7 0.6 29 248-276 5-33 (34)
4 d1m9oa_ g.66.1.1 (A:) Tristetr 98.2 2.7E-07 2E-11 63.6 3.4 34 292-325 4-37 (40)
5 d1rgoa1 g.66.1.1 (A:151-186) B 98.2 1E-07 7.6E-12 64.2 0.1 32 294-325 3-34 (36)
6 d1rgoa2 g.66.1.1 (A:187-220) B 98.1 1.7E-07 1.3E-11 62.4 0.7 30 293-322 4-33 (34)
7 d2cqea2 g.66.1.1 (A:429-457) Z 97.2 8.7E-05 6.3E-09 46.6 2.6 24 49-73 5-28 (29)
8 d2cqea2 g.66.1.1 (A:429-457) Z 97.2 7.3E-05 5.3E-09 46.9 2.2 24 91-115 5-28 (29)
9 d2cqea1 g.66.1.1 (A:458-513) Z 95.2 0.003 2.2E-07 45.5 1.5 22 253-274 2-23 (56)
10 d2cqea1 g.66.1.1 (A:458-513) Z 94.6 0.0067 4.9E-07 43.7 1.9 22 52-73 2-23 (56)
11 d2fc6a1 g.66.1.1 (A:8-44) Targ 91.6 0.022 1.6E-06 37.4 0.7 25 297-321 13-37 (37)
12 d2fc6a1 g.66.1.1 (A:8-44) Targ 84.1 0.15 1.1E-05 33.2 1.0 25 250-274 12-36 (37)
No 1
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.44 E-value=5.3e-08 Score=67.19 Aligned_cols=34 Identities=38% Similarity=0.831 Sum_probs=30.5
Q ss_pred CCCCCcccccccccCCCCCCCCCCCCCchhhhhc
Q 014918 247 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 280 (416)
Q Consensus 247 erpkq~~Cr~y~ktG~Ck~G~~CrF~H~~d~~~~ 280 (416)
.+.|+.+|++|.++|.|+||+.|.|+|..++++.
T Consensus 5 ~~yKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr~ 38 (40)
T d1m9oa_ 5 SRYKTELCRTYSESGRCRYGAKCQFAHGLGELRQ 38 (40)
T ss_dssp SCCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGGG
T ss_pred CccccccChhhhcCCcCCCCCCCCCCCCHHHhcC
Confidence 4679999999999999999999999999887754
No 2
>d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=2.6e-08 Score=67.25 Aligned_cols=33 Identities=36% Similarity=0.792 Sum_probs=29.7
Q ss_pred CCCCcccccccccCCCCCCCCCCCCCchhhhhc
Q 014918 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 280 (416)
Q Consensus 248 rpkq~~Cr~y~ktG~Ck~G~~CrF~H~~d~~~~ 280 (416)
+.|+.+|++|.++|.|+||+.|.|+|..++++.
T Consensus 3 kyKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr~ 35 (36)
T d1rgoa1 3 RYKTELCRPFEESGTCKYGEKCQFAHGFHELRS 35 (36)
T ss_dssp TTTSSBCHHHHHHSCCTTGGGCSSBSSGGGCCC
T ss_pred CcchhhCcchhcCCcCCCCCcCCCcCCHHHccC
Confidence 579999999998899999999999999887653
No 3
>d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=5.8e-08 Score=64.75 Aligned_cols=29 Identities=31% Similarity=0.777 Sum_probs=26.7
Q ss_pred CCCCcccccccccCCCCCCCCCCCCCchh
Q 014918 248 RPDQPDCRYYMNTGTCKYGADCKFHHPKE 276 (416)
Q Consensus 248 rpkq~~Cr~y~ktG~Ck~G~~CrF~H~~d 276 (416)
+.|+.+|++|.++|.|.||+.|.|+|..+
T Consensus 5 kyKT~lC~~f~~~g~C~yG~~C~FaHg~~ 33 (34)
T d1rgoa2 5 KYKTELCRTFHTIGFCPYGPRCHFIHNAD 33 (34)
T ss_dssp TTTCSBCHHHHHHSCCTTGGGCSSBCCSC
T ss_pred CccchhccccCCCCcCCCCCcccCcCCCC
Confidence 57999999999999999999999999754
No 4
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.25 E-value=2.7e-07 Score=63.56 Aligned_cols=34 Identities=32% Similarity=0.757 Sum_probs=31.0
Q ss_pred CCCCCCccCcccccccccCCCCCCCCCCCCCCCC
Q 014918 292 PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325 (416)
Q Consensus 292 P~rp~~~~C~~y~~~G~CkfG~~CkF~Hp~~~~~ 325 (416)
+.++++.+|++|.+.|.|+||++|.|+|...+|.
T Consensus 4 ~~~yKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr 37 (40)
T d1m9oa_ 4 SSRYKTELCRTYSESGRCRYGAKCQFAHGLGELR 37 (40)
T ss_dssp SSCCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGG
T ss_pred CCccccccChhhhcCCcCCCCCCCCCCCCHHHhc
Confidence 4578899999999999999999999999998875
No 5
>d1rgoa1 g.66.1.1 (A:151-186) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18 E-value=1e-07 Score=64.24 Aligned_cols=32 Identities=28% Similarity=0.769 Sum_probs=29.6
Q ss_pred CCCCccCcccccccccCCCCCCCCCCCCCCCC
Q 014918 294 RPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 325 (416)
Q Consensus 294 rp~~~~C~~y~~~G~CkfG~~CkF~Hp~~~~~ 325 (416)
++++.+|++|..+|.|+||++|.|+|...+|.
T Consensus 3 kyKT~lC~~~~~~g~C~~G~~C~FAHg~~ELr 34 (36)
T d1rgoa1 3 RYKTELCRPFEESGTCKYGEKCQFAHGFHELR 34 (36)
T ss_dssp TTTSSBCHHHHHHSCCTTGGGCSSBSSGGGCC
T ss_pred CcchhhCcchhcCCcCCCCCcCCCcCCHHHcc
Confidence 67899999999889999999999999998875
No 6
>d1rgoa2 g.66.1.1 (A:187-220) Butyrate response factor 2 (Tis11D) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=1.7e-07 Score=62.37 Aligned_cols=30 Identities=27% Similarity=0.806 Sum_probs=27.4
Q ss_pred CCCCCccCcccccccccCCCCCCCCCCCCC
Q 014918 293 SRPGQAICSNYSMYGICKFGPTCRFDHPYA 322 (416)
Q Consensus 293 ~rp~~~~C~~y~~~G~CkfG~~CkF~Hp~~ 322 (416)
.++++.+|++|..+|.|+||++|.|+|...
T Consensus 4 pkyKT~lC~~f~~~g~C~yG~~C~FaHg~~ 33 (34)
T d1rgoa2 4 PKYKTELCRTFHTIGFCPYGPRCHFIHNAD 33 (34)
T ss_dssp TTTTCSBCHHHHHHSCCTTGGGCSSBCCSC
T ss_pred CCccchhccccCCCCcCCCCCcccCcCCCC
Confidence 367899999999999999999999999865
No 7
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21 E-value=8.7e-05 Score=46.57 Aligned_cols=24 Identities=38% Similarity=0.837 Sum_probs=21.9
Q ss_pred CCcccchhhccCCCCCCCCCCCCCc
Q 014918 49 GEPDCLFYRRTGLCGYGSNCRFNHP 73 (416)
Q Consensus 49 g~~~CryylrtG~C~~G~~C~F~H~ 73 (416)
.+.+|+||+ .|.|..|++|.|-|.
T Consensus 5 kkelCKfYv-qGyCtrgenC~ymH~ 28 (29)
T d2cqea2 5 KRELCKFYI-TGFCARAENCPYMHG 28 (29)
T ss_dssp CCSBCTTTT-TTCCSCSTTCSSBSS
T ss_pred hhhhhhhhe-eeeecCCcCcccccC
Confidence 368999999 699999999999996
No 8
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.20 E-value=7.3e-05 Score=46.92 Aligned_cols=24 Identities=29% Similarity=0.816 Sum_probs=21.8
Q ss_pred CCccccccccccccCCCCCCCCCCC
Q 014918 91 GQPDCGYYLKTGTCKYGSTCKYHHP 115 (416)
Q Consensus 91 ~~~~Ck~flktG~CkyG~~CrF~Hp 115 (416)
+..+|+||++ |.|..|++|.|.|.
T Consensus 5 kkelCKfYvq-GyCtrgenC~ymH~ 28 (29)
T d2cqea2 5 KRELCKFYIT-GFCARAENCPYMHG 28 (29)
T ss_dssp CCSBCTTTTT-TCCSCSTTCSSBSS
T ss_pred hhhhhhhhee-eeecCCcCcccccC
Confidence 3568999999 99999999999996
No 9
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.20 E-value=0.003 Score=45.54 Aligned_cols=22 Identities=45% Similarity=1.079 Sum_probs=20.3
Q ss_pred ccccccccCCCCCCCCCCCCCc
Q 014918 253 DCRYYMNTGTCKYGADCKFHHP 274 (416)
Q Consensus 253 ~Cr~y~ktG~Ck~G~~CrF~H~ 274 (416)
.|.||-.++.|..|+.|+|+|.
T Consensus 2 PCK~yHtg~kCy~gd~C~FSH~ 23 (56)
T d2cqea1 2 PCKLYHTTGNCINGDDCMFSHD 23 (56)
T ss_dssp BCSHHHHTSCCSSCTTCSSBCC
T ss_pred CcceeecCCcccCCCcccccCC
Confidence 5999999789999999999994
No 10
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.55 E-value=0.0067 Score=43.69 Aligned_cols=22 Identities=41% Similarity=0.952 Sum_probs=19.7
Q ss_pred ccchhhccCCCCCCCCCCCCCc
Q 014918 52 DCLFYRRTGLCGYGSNCRFNHP 73 (416)
Q Consensus 52 ~CryylrtG~C~~G~~C~F~H~ 73 (416)
.|+||-..+.|-.|++|+|+|.
T Consensus 2 PCK~yHtg~kCy~gd~C~FSH~ 23 (56)
T d2cqea1 2 PCKLYHTTGNCINGDDCMFSHD 23 (56)
T ss_dssp BCSHHHHTSCCSSCTTCSSBCC
T ss_pred CcceeecCCcccCCCcccccCC
Confidence 4999986568999999999997
No 11
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.62 E-value=0.022 Score=37.36 Aligned_cols=25 Identities=44% Similarity=1.069 Sum_probs=23.0
Q ss_pred CccCcccccccccCCCCCCCCCCCC
Q 014918 297 QAICSNYSMYGICKFGPTCRFDHPY 321 (416)
Q Consensus 297 ~~~C~~y~~~G~CkfG~~CkF~Hp~ 321 (416)
+.+|..|..+|+|+.|..|...|.+
T Consensus 13 ~~iC~~FsAyGWCP~G~qCp~SHdi 37 (37)
T d2fc6a1 13 TSICDNFSAYGWCPLGPQCPQSHDI 37 (37)
T ss_dssp SCBCSHHHHTCCCTTGGGCSSBCCC
T ss_pred cchhhhhhhccccCCCCCCcccCcC
Confidence 6699999999999999999999974
No 12
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.09 E-value=0.15 Score=33.24 Aligned_cols=25 Identities=24% Similarity=0.566 Sum_probs=23.3
Q ss_pred CCcccccccccCCCCCCCCCCCCCc
Q 014918 250 DQPDCRYYMNTGTCKYGADCKFHHP 274 (416)
Q Consensus 250 kq~~Cr~y~ktG~Ck~G~~CrF~H~ 274 (416)
.+.+|.-|...|.|..|.+|.-+|+
T Consensus 12 ~~~iC~~FsAyGWCP~G~qCp~SHd 36 (37)
T d2fc6a1 12 PTSICDNFSAYGWCPLGPQCPQSHD 36 (37)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCC
T ss_pred ccchhhhhhhccccCCCCCCcccCc
Confidence 6789999999999999999999995
Done!