Query 014919
Match_columns 416
No_of_seqs 452 out of 3324
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 03:28:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014919.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014919hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 16pk_A PGK, 3-phosphoglycerate 100.0 4.8E-66 1.6E-70 511.4 14.0 211 2-214 200-414 (415)
2 1vpe_A Phosphoglycerate kinase 100.0 5.8E-66 2E-70 509.3 14.0 210 2-214 181-395 (398)
3 3oz7_A Phosphoglycerate kinase 100.0 1.3E-65 4.5E-70 509.4 15.6 209 2-213 202-416 (417)
4 1fw8_A PGK P72, phosphoglycera 100.0 9.3E-66 3.2E-70 510.3 13.6 212 2-216 128-345 (416)
5 1v6s_A Phosphoglycerate kinase 100.0 1.8E-65 6.3E-70 504.5 15.2 208 1-213 178-389 (390)
6 1qpg_A PGK, 3-phosphoglycerate 100.0 1.1E-65 3.7E-70 509.8 13.5 210 2-214 198-413 (415)
7 3q3v_A Phosphoglycerate kinase 100.0 1.3E-65 4.5E-70 506.7 13.8 208 2-215 189-400 (403)
8 1php_A 3-phosphoglycerate kina 100.0 1.8E-65 6.2E-70 505.1 13.7 208 2-214 182-393 (394)
9 4fey_A Phosphoglycerate kinase 100.0 1.7E-65 5.7E-70 504.7 12.5 208 2-215 181-392 (395)
10 2wzb_A Phosphoglycerate kinase 100.0 1.4E-65 4.7E-70 509.1 10.6 210 2-214 200-415 (416)
11 1zmr_A Phosphoglycerate kinase 100.0 1.3E-63 4.4E-68 490.2 10.8 202 2-214 178-383 (387)
12 2cun_A Phosphoglycerate kinase 100.0 1.9E-61 6.6E-66 478.7 10.3 200 2-215 185-401 (410)
13 3dxy_A TRNA (guanine-N(7)-)-me 100.0 7E-32 2.4E-36 252.0 17.5 183 219-413 24-210 (218)
14 2fca_A TRNA (guanine-N(7)-)-me 100.0 1.7E-31 5.7E-36 248.1 17.7 181 219-412 28-212 (213)
15 3ckk_A TRNA (guanine-N(7)-)-me 100.0 1.4E-29 4.8E-34 239.1 19.4 176 230-414 46-231 (235)
16 1yzh_A TRNA (guanine-N(7)-)-me 100.0 8.2E-29 2.8E-33 229.2 20.2 180 219-411 31-214 (214)
17 2vdv_E TRNA (guanine-N(7)-)-me 99.9 3E-27 1E-31 223.8 14.6 187 220-415 30-237 (246)
18 3p2e_A 16S rRNA methylase; met 99.6 8.4E-16 2.9E-20 143.6 7.3 113 222-342 17-137 (225)
19 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.5E-14 5.2E-19 138.1 8.2 125 202-343 46-177 (261)
20 1yb2_A Hypothetical protein TA 99.5 2E-13 6.9E-18 130.8 14.1 155 230-414 110-270 (275)
21 3e05_A Precorrin-6Y C5,15-meth 99.5 8.4E-13 2.9E-17 120.2 16.6 117 230-362 40-160 (204)
22 3g5l_A Putative S-adenosylmeth 99.5 2.8E-13 9.5E-18 127.3 12.3 102 230-345 44-146 (253)
23 2pwy_A TRNA (adenine-N(1)-)-me 99.5 3.9E-13 1.3E-17 126.4 13.3 118 230-365 96-219 (258)
24 3mb5_A SAM-dependent methyltra 99.5 6.4E-13 2.2E-17 125.1 13.9 117 230-365 93-217 (255)
25 3mq2_A 16S rRNA methyltransfer 99.4 4E-13 1.4E-17 123.6 11.8 127 230-366 27-180 (218)
26 3hm2_A Precorrin-6Y C5,15-meth 99.4 1.5E-12 5E-17 115.3 14.5 119 230-365 25-148 (178)
27 3h2b_A SAM-dependent methyltra 99.4 5.9E-13 2E-17 120.8 12.0 122 231-366 42-178 (203)
28 1xdz_A Methyltransferase GIDB; 99.4 1.4E-12 4.9E-17 122.1 14.5 121 231-365 71-197 (240)
29 3orh_A Guanidinoacetate N-meth 99.4 4.2E-13 1.4E-17 125.9 10.0 129 230-365 60-205 (236)
30 3njr_A Precorrin-6Y methylase; 99.4 2.6E-12 8.9E-17 117.8 15.0 117 230-366 55-176 (204)
31 4hg2_A Methyltransferase type 99.4 2E-13 6.7E-18 130.2 7.7 97 230-344 39-135 (257)
32 1i9g_A Hypothetical protein RV 99.4 1.5E-12 5.3E-17 124.2 14.0 116 230-363 99-223 (280)
33 1pjz_A Thiopurine S-methyltran 99.4 1.4E-13 4.7E-18 126.1 6.3 101 230-343 22-139 (203)
34 3dtn_A Putative methyltransfer 99.4 2.4E-12 8.3E-17 119.3 14.3 103 230-344 44-148 (234)
35 3dh0_A SAM dependent methyltra 99.4 1E-12 3.5E-17 120.5 11.3 123 230-365 37-176 (219)
36 3l8d_A Methyltransferase; stru 99.4 1.3E-12 4.6E-17 121.4 11.4 100 230-344 53-153 (242)
37 1o54_A SAM-dependent O-methylt 99.4 3E-12 1E-16 122.5 13.7 119 230-367 112-236 (277)
38 3dlc_A Putative S-adenosyl-L-m 99.4 2.4E-12 8.1E-17 117.3 12.4 99 232-344 45-148 (219)
39 3mti_A RRNA methylase; SAM-dep 99.4 2.9E-12 9.8E-17 114.6 12.5 107 230-344 22-135 (185)
40 4df3_A Fibrillarin-like rRNA/T 99.4 7.8E-12 2.7E-16 117.3 15.8 125 230-366 77-213 (233)
41 1vl5_A Unknown conserved prote 99.4 1.7E-12 5.9E-17 122.5 11.4 99 230-343 37-139 (260)
42 3g89_A Ribosomal RNA small sub 99.4 3.3E-12 1.1E-16 121.0 13.3 122 230-365 80-207 (249)
43 3evz_A Methyltransferase; NYSG 99.4 4.1E-12 1.4E-16 117.5 13.8 128 230-365 55-201 (230)
44 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.4E-12 8.3E-17 119.8 12.0 121 230-365 77-212 (233)
45 2gb4_A Thiopurine S-methyltran 99.4 1.5E-12 5.1E-17 123.7 10.7 102 230-344 68-191 (252)
46 2b3t_A Protein methyltransfera 99.4 6.1E-12 2.1E-16 120.4 14.9 131 230-367 109-260 (276)
47 1nt2_A Fibrillarin-like PRE-rR 99.4 6.1E-12 2.1E-16 116.0 14.3 101 230-344 57-161 (210)
48 2p35_A Trans-aconitate 2-methy 99.4 1.3E-12 4.6E-17 122.6 10.0 100 230-344 33-132 (259)
49 3eey_A Putative rRNA methylase 99.4 3.6E-12 1.2E-16 115.1 12.1 111 230-344 22-139 (197)
50 3mgg_A Methyltransferase; NYSG 99.4 2.7E-12 9.1E-17 122.2 11.8 102 230-344 37-142 (276)
51 2p7i_A Hypothetical protein; p 99.4 2.4E-12 8.2E-17 119.5 11.0 100 231-346 43-143 (250)
52 3grz_A L11 mtase, ribosomal pr 99.4 2.4E-12 8.2E-17 117.2 10.3 118 230-366 60-181 (205)
53 3ujc_A Phosphoethanolamine N-m 99.4 3.2E-12 1.1E-16 120.2 11.5 103 230-344 55-159 (266)
54 3f4k_A Putative methyltransfer 99.3 6.2E-12 2.1E-16 118.1 13.0 100 230-344 46-150 (257)
55 3lpm_A Putative methyltransfer 99.3 8.4E-12 2.9E-16 118.3 13.8 128 231-365 50-196 (259)
56 1xxl_A YCGJ protein; structura 99.3 2.4E-12 8.2E-17 120.3 9.9 99 230-343 21-123 (239)
57 3hnr_A Probable methyltransfer 99.3 5.6E-12 1.9E-16 115.6 12.1 119 230-362 45-166 (220)
58 3g5t_A Trans-aconitate 3-methy 99.3 3.4E-12 1.2E-16 123.3 11.0 99 230-342 36-147 (299)
59 3jwh_A HEN1; methyltransferase 99.3 3.4E-12 1.2E-16 117.2 10.3 108 230-349 29-145 (217)
60 4htf_A S-adenosylmethionine-de 99.3 1.1E-11 3.8E-16 118.6 14.1 102 231-346 69-175 (285)
61 4fsd_A Arsenic methyltransfera 99.3 3.8E-12 1.3E-16 127.8 11.4 128 230-365 83-246 (383)
62 3g07_A 7SK snRNA methylphospha 99.3 4.6E-12 1.6E-16 122.5 11.4 113 231-345 47-221 (292)
63 3bwc_A Spermidine synthase; SA 99.3 1.4E-11 4.8E-16 120.0 15.0 128 230-364 95-234 (304)
64 3dli_A Methyltransferase; PSI- 99.3 5.3E-12 1.8E-16 117.8 11.2 121 231-366 42-180 (240)
65 3tma_A Methyltransferase; thum 99.3 1.1E-11 3.8E-16 123.0 14.1 118 230-352 203-325 (354)
66 1fbn_A MJ fibrillarin homologu 99.3 1.1E-11 3.7E-16 115.4 13.1 123 230-365 74-208 (230)
67 2r3s_A Uncharacterized protein 99.3 6.5E-13 2.2E-17 130.1 4.8 209 115-343 38-270 (335)
68 1nkv_A Hypothetical protein YJ 99.3 7.4E-12 2.5E-16 117.5 11.7 121 230-365 36-182 (256)
69 1dus_A MJ0882; hypothetical pr 99.3 1.2E-11 3.9E-16 110.3 12.2 116 230-360 52-173 (194)
70 3p9n_A Possible methyltransfer 99.3 1.1E-11 3.6E-16 111.6 12.0 106 230-346 44-155 (189)
71 4dzr_A Protein-(glutamine-N5) 99.3 9.7E-13 3.3E-17 119.5 5.1 131 230-363 30-185 (215)
72 3bkw_A MLL3908 protein, S-aden 99.3 1.9E-11 6.5E-16 113.5 14.0 103 230-346 43-146 (243)
73 3kkz_A Uncharacterized protein 99.3 7.2E-12 2.5E-16 118.8 11.2 121 230-365 46-191 (267)
74 3ou2_A SAM-dependent methyltra 99.3 5.7E-12 1.9E-16 115.0 10.1 102 231-346 47-148 (218)
75 2ex4_A Adrenal gland protein A 99.3 5.2E-12 1.8E-16 118.0 10.0 125 231-367 80-222 (241)
76 2b25_A Hypothetical protein; s 99.3 7.4E-12 2.5E-16 123.3 11.5 115 230-360 105-235 (336)
77 3dr5_A Putative O-methyltransf 99.3 1.4E-11 4.8E-16 114.5 12.7 98 231-342 57-161 (221)
78 3ntv_A MW1564 protein; rossman 99.3 1.4E-11 4.7E-16 115.0 12.7 99 230-342 71-174 (232)
79 1zx0_A Guanidinoacetate N-meth 99.3 7.8E-12 2.7E-16 116.6 11.0 106 230-343 60-169 (236)
80 2yxd_A Probable cobalt-precorr 99.3 5.1E-11 1.8E-15 105.2 15.7 114 230-365 35-152 (183)
81 3jwg_A HEN1, methyltransferase 99.3 4.6E-12 1.6E-16 116.3 9.2 105 230-346 29-142 (219)
82 2xvm_A Tellurite resistance pr 99.3 1.5E-11 5.2E-16 110.5 12.3 101 230-344 32-136 (199)
83 3bus_A REBM, methyltransferase 99.3 1.8E-11 6E-16 116.1 13.2 101 230-344 61-166 (273)
84 1l3i_A Precorrin-6Y methyltran 99.3 4.1E-11 1.4E-15 106.5 14.8 117 230-364 33-154 (192)
85 3fpf_A Mtnas, putative unchara 99.3 1.8E-11 6.3E-16 118.5 13.3 97 230-344 122-222 (298)
86 3q87_B N6 adenine specific DNA 99.3 1.1E-11 3.7E-16 110.2 10.8 123 230-367 23-146 (170)
87 1xtp_A LMAJ004091AAA; SGPP, st 99.3 8.2E-12 2.8E-16 116.9 10.5 124 230-365 93-233 (254)
88 2ozv_A Hypothetical protein AT 99.3 1.6E-11 5.5E-16 116.8 12.4 127 231-360 37-185 (260)
89 1inl_A Spermidine synthase; be 99.3 2.4E-11 8.2E-16 118.0 13.8 124 230-360 90-225 (296)
90 3m33_A Uncharacterized protein 99.3 4.5E-12 1.5E-16 117.5 8.3 115 230-366 48-163 (226)
91 3duw_A OMT, O-methyltransferas 99.3 2E-11 7E-16 112.4 12.6 102 231-343 59-166 (223)
92 3ccf_A Cyclopropane-fatty-acyl 99.3 7.9E-12 2.7E-16 119.4 10.1 98 230-344 57-154 (279)
93 2pxx_A Uncharacterized protein 99.3 1.9E-11 6.6E-16 111.0 12.0 110 230-347 42-162 (215)
94 3tfw_A Putative O-methyltransf 99.3 2E-11 6.7E-16 115.2 12.5 100 231-343 64-169 (248)
95 3sm3_A SAM-dependent methyltra 99.3 1.5E-11 5E-16 113.4 11.4 103 230-344 30-141 (235)
96 2frn_A Hypothetical protein PH 99.3 9.4E-12 3.2E-16 119.6 10.3 116 231-365 126-252 (278)
97 1xj5_A Spermidine synthase 1; 99.3 1.9E-11 6.5E-16 120.8 12.5 110 230-346 120-237 (334)
98 2yqz_A Hypothetical protein TT 99.3 1E-11 3.6E-16 116.6 10.2 99 230-343 39-140 (263)
99 2o57_A Putative sarcosine dime 99.3 1.7E-11 5.8E-16 117.9 11.7 101 230-344 82-187 (297)
100 3e23_A Uncharacterized protein 99.3 6.6E-12 2.3E-16 114.6 7.8 121 231-367 44-179 (211)
101 4dcm_A Ribosomal RNA large sub 99.3 3.1E-11 1.1E-15 121.1 13.4 119 231-358 223-349 (375)
102 1jsx_A Glucose-inhibited divis 99.3 1.5E-11 5E-16 111.8 10.1 97 231-345 66-166 (207)
103 3ocj_A Putative exported prote 99.3 8.6E-12 2.9E-16 121.0 9.0 104 230-344 118-227 (305)
104 1iy9_A Spermidine synthase; ro 99.3 4.5E-11 1.5E-15 114.8 13.8 123 230-360 75-209 (275)
105 3e8s_A Putative SAM dependent 99.3 3.3E-11 1.1E-15 110.3 12.1 102 230-345 52-153 (227)
106 3cgg_A SAM-dependent methyltra 99.3 2.3E-11 8E-16 108.4 10.8 124 230-366 46-171 (195)
107 3vc1_A Geranyl diphosphate 2-C 99.3 3E-11 1E-15 117.5 12.4 100 230-344 117-221 (312)
108 3hem_A Cyclopropane-fatty-acyl 99.3 3.5E-11 1.2E-15 116.3 12.8 106 230-344 72-183 (302)
109 2pt6_A Spermidine synthase; tr 99.3 4E-11 1.4E-15 117.8 13.3 123 230-360 116-250 (321)
110 3adn_A Spermidine synthase; am 99.2 1.7E-11 6E-16 118.9 10.4 123 230-360 83-218 (294)
111 2yvl_A TRMI protein, hypotheti 99.2 3.9E-11 1.3E-15 111.9 12.5 111 230-360 91-206 (248)
112 3i9f_A Putative type 11 methyl 99.2 1.5E-11 5.1E-16 108.2 8.9 95 230-343 17-111 (170)
113 2plw_A Ribosomal RNA methyltra 99.2 1.3E-11 4.5E-16 111.6 8.8 120 231-359 23-169 (201)
114 3ofk_A Nodulation protein S; N 99.2 2E-11 6.8E-16 111.7 10.0 105 230-347 51-157 (216)
115 3ege_A Putative methyltransfer 99.2 1E-11 3.4E-16 117.7 8.2 97 230-344 34-130 (261)
116 1uir_A Polyamine aminopropyltr 99.2 7E-11 2.4E-15 115.6 14.4 126 230-360 77-216 (314)
117 3lcc_A Putative methyl chlorid 99.2 1.7E-11 5.7E-16 113.9 9.4 123 231-367 67-204 (235)
118 1ws6_A Methyltransferase; stru 99.2 4.3E-11 1.5E-15 104.8 11.6 103 231-347 42-150 (171)
119 2o07_A Spermidine synthase; st 99.2 4.8E-11 1.6E-15 116.4 13.0 122 230-359 95-228 (304)
120 1mjf_A Spermidine synthase; sp 99.2 5.9E-11 2E-15 114.3 13.5 121 230-360 75-213 (281)
121 3gjy_A Spermidine synthase; AP 99.2 4.8E-11 1.6E-15 116.8 12.9 122 232-360 91-219 (317)
122 2gs9_A Hypothetical protein TT 99.2 2.3E-11 7.8E-16 110.9 10.0 98 230-346 36-134 (211)
123 3tr6_A O-methyltransferase; ce 99.2 5.1E-11 1.8E-15 109.7 12.4 102 231-343 65-173 (225)
124 1p91_A Ribosomal RNA large sub 99.2 2.3E-11 7.7E-16 115.4 10.2 101 230-351 85-185 (269)
125 2nxc_A L11 mtase, ribosomal pr 99.2 5E-11 1.7E-15 113.0 12.4 118 230-367 120-241 (254)
126 3gu3_A Methyltransferase; alph 99.2 2.9E-11 9.8E-16 116.1 10.8 103 230-346 22-128 (284)
127 3a27_A TYW2, uncharacterized p 99.2 3.4E-11 1.1E-15 115.4 11.0 113 230-360 119-240 (272)
128 1ve3_A Hypothetical protein PH 99.2 3.6E-11 1.2E-15 110.4 10.8 101 231-345 39-143 (227)
129 1ej0_A FTSJ; methyltransferase 99.2 1.9E-11 6.3E-16 107.0 8.4 122 230-360 22-152 (180)
130 2i7c_A Spermidine synthase; tr 99.2 7.9E-11 2.7E-15 113.6 13.2 123 230-360 78-212 (283)
131 2fhp_A Methylase, putative; al 99.2 4E-11 1.4E-15 106.8 9.9 106 230-346 44-156 (187)
132 3g2m_A PCZA361.24; SAM-depende 99.2 3.2E-11 1.1E-15 116.4 9.8 105 231-349 83-195 (299)
133 3m70_A Tellurite resistance pr 99.2 5.8E-11 2E-15 113.6 11.6 100 230-344 120-223 (286)
134 2ift_A Putative methylase HI07 99.2 5.4E-11 1.8E-15 108.6 10.6 104 231-347 54-166 (201)
135 3ggd_A SAM-dependent methyltra 99.2 6.5E-11 2.2E-15 110.5 11.3 106 230-344 56-163 (245)
136 1g8a_A Fibrillarin-like PRE-rR 99.2 7.3E-11 2.5E-15 109.1 11.3 103 230-344 73-178 (227)
137 3r3h_A O-methyltransferase, SA 99.2 3.6E-11 1.2E-15 113.2 9.3 102 231-343 61-169 (242)
138 2vdw_A Vaccinia virus capping 99.2 7.1E-11 2.4E-15 115.0 11.6 110 230-349 48-174 (302)
139 1y8c_A S-adenosylmethionine-de 99.2 8E-11 2.7E-15 109.1 11.4 104 230-347 37-145 (246)
140 3thr_A Glycine N-methyltransfe 99.2 2.7E-11 9.3E-16 116.1 8.3 115 230-349 57-180 (293)
141 2gpy_A O-methyltransferase; st 99.2 1.2E-10 4.3E-15 108.1 12.6 100 231-343 55-159 (233)
142 3u81_A Catechol O-methyltransf 99.2 3.2E-11 1.1E-15 111.4 8.4 123 231-362 59-188 (221)
143 2esr_A Methyltransferase; stru 99.2 5.9E-11 2E-15 105.2 9.9 104 230-347 31-141 (177)
144 2fpo_A Methylase YHHF; structu 99.2 9.7E-11 3.3E-15 106.9 11.4 103 231-347 55-163 (202)
145 3c3p_A Methyltransferase; NP_9 99.2 1.3E-10 4.4E-15 106.2 12.2 97 231-343 57-159 (210)
146 1sui_A Caffeoyl-COA O-methyltr 99.2 1.6E-10 5.5E-15 109.1 13.1 103 230-343 79-189 (247)
147 2b2c_A Spermidine synthase; be 99.2 8E-11 2.7E-15 115.3 11.2 123 230-360 108-242 (314)
148 2aot_A HMT, histamine N-methyl 99.2 7.7E-11 2.6E-15 113.5 10.8 106 231-344 53-172 (292)
149 1kpg_A CFA synthase;, cyclopro 99.2 1.8E-10 6E-15 110.2 13.1 100 230-344 64-168 (287)
150 3pfg_A N-methyltransferase; N, 99.2 4E-11 1.4E-15 113.3 8.3 100 230-343 50-150 (263)
151 2p8j_A S-adenosylmethionine-de 99.2 3.3E-11 1.1E-15 109.4 7.3 101 231-344 24-128 (209)
152 3id6_C Fibrillarin-like rRNA/T 99.2 2.3E-10 8E-15 107.2 12.9 122 230-365 76-211 (232)
153 2kw5_A SLR1183 protein; struct 99.2 9.6E-11 3.3E-15 106.0 10.0 96 233-344 32-131 (202)
154 1ri5_A MRNA capping enzyme; me 99.2 1.4E-10 4.7E-15 111.0 11.6 109 230-348 64-178 (298)
155 3bgv_A MRNA CAP guanine-N7 met 99.2 1.1E-10 3.8E-15 113.4 10.9 113 230-348 34-159 (313)
156 1ixk_A Methyltransferase; open 99.2 1.4E-10 4.7E-15 113.5 11.6 110 230-344 118-246 (315)
157 3ajd_A Putative methyltransfer 99.2 3.2E-10 1.1E-14 108.5 13.8 114 230-344 83-211 (274)
158 1nv8_A HEMK protein; class I a 99.1 9.6E-11 3.3E-15 113.1 10.0 119 231-360 124-264 (284)
159 3q7e_A Protein arginine N-meth 99.1 1.6E-10 5.4E-15 114.7 11.9 101 231-342 67-171 (349)
160 2avn_A Ubiquinone/menaquinone 99.1 8.9E-11 3E-15 111.0 9.6 101 230-347 54-155 (260)
161 1vlm_A SAM-dependent methyltra 99.1 1.1E-10 3.9E-15 107.3 9.8 92 231-344 48-139 (219)
162 2fk8_A Methoxy mycolic acid sy 99.1 2.7E-10 9.2E-15 110.8 12.9 100 230-344 90-194 (318)
163 3lbf_A Protein-L-isoaspartate 99.1 2.6E-10 8.7E-15 103.9 12.0 96 230-346 77-176 (210)
164 3uwp_A Histone-lysine N-methyl 99.1 6.3E-11 2.2E-15 119.2 8.5 101 230-342 173-286 (438)
165 1wxx_A TT1595, hypothetical pr 99.1 4.9E-10 1.7E-14 112.4 15.0 130 231-364 210-350 (382)
166 2hnk_A SAM-dependent O-methylt 99.1 3.5E-10 1.2E-14 105.6 12.8 103 231-344 61-181 (239)
167 2avd_A Catechol-O-methyltransf 99.1 3.1E-10 1.1E-14 104.8 12.3 102 230-343 69-178 (229)
168 3bxo_A N,N-dimethyltransferase 99.1 1.1E-10 3.8E-15 108.0 9.3 101 230-344 40-141 (239)
169 3c3y_A Pfomt, O-methyltransfer 99.1 3.6E-10 1.2E-14 105.9 12.8 103 230-343 70-180 (237)
170 3htx_A HEN1; HEN1, small RNA m 99.1 1.2E-10 4.2E-15 125.3 10.6 108 230-349 721-839 (950)
171 3dp7_A SAM-dependent methyltra 99.1 2.1E-10 7.2E-15 114.2 11.6 104 230-343 179-286 (363)
172 1wzn_A SAM-dependent methyltra 99.1 2.5E-10 8.4E-15 106.9 11.5 103 230-346 41-147 (252)
173 2h00_A Methyltransferase 10 do 99.1 6.4E-10 2.2E-14 104.6 13.9 110 231-342 66-190 (254)
174 3d2l_A SAM-dependent methyltra 99.1 3.1E-10 1E-14 105.2 11.2 104 231-349 34-142 (243)
175 1qzz_A RDMB, aclacinomycin-10- 99.1 4.6E-10 1.6E-14 111.6 12.9 102 230-344 182-287 (374)
176 3dmg_A Probable ribosomal RNA 99.1 4.9E-10 1.7E-14 112.6 13.2 117 230-357 233-354 (381)
177 1wy7_A Hypothetical protein PH 99.1 1.6E-09 5.4E-14 98.4 15.3 118 230-365 49-170 (207)
178 3bkx_A SAM-dependent methyltra 99.1 3.5E-10 1.2E-14 107.2 11.3 104 230-344 43-159 (275)
179 3cbg_A O-methyltransferase; cy 99.1 4.8E-10 1.7E-14 104.5 12.0 101 231-343 73-181 (232)
180 3i53_A O-methyltransferase; CO 99.1 3.8E-10 1.3E-14 110.6 11.8 102 230-344 169-274 (332)
181 3cc8_A Putative methyltransfer 99.1 2.7E-10 9.3E-15 104.3 9.9 105 230-350 32-136 (230)
182 1o9g_A RRNA methyltransferase; 99.1 7.7E-11 2.6E-15 110.9 6.3 111 230-343 51-213 (250)
183 3kr9_A SAM-dependent methyltra 99.1 4.1E-10 1.4E-14 105.0 11.1 118 230-365 15-138 (225)
184 2bm8_A Cephalosporin hydroxyla 99.1 1.3E-10 4.4E-15 109.1 7.3 98 231-343 82-186 (236)
185 2yxe_A Protein-L-isoaspartate 99.1 3E-10 1E-14 103.9 9.2 99 230-347 77-180 (215)
186 2qe6_A Uncharacterized protein 99.1 5.8E-10 2E-14 107.0 11.6 106 231-344 78-196 (274)
187 2fyt_A Protein arginine N-meth 99.1 6.4E-10 2.2E-14 109.9 12.2 101 230-341 64-168 (340)
188 3mcz_A O-methyltransferase; ad 99.1 5.4E-10 1.8E-14 110.2 11.5 103 231-343 180-286 (352)
189 3lec_A NADB-rossmann superfami 99.1 8.6E-10 2.9E-14 103.1 12.2 120 230-366 21-145 (230)
190 3tm4_A TRNA (guanine N2-)-meth 99.1 1.2E-09 4E-14 109.4 14.1 123 230-364 217-346 (373)
191 2nyu_A Putative ribosomal RNA 99.1 3.7E-10 1.3E-14 101.4 9.4 118 231-359 23-160 (196)
192 2b78_A Hypothetical protein SM 99.1 1.7E-09 5.9E-14 108.7 15.3 113 230-346 212-333 (385)
193 1x19_A CRTF-related protein; m 99.1 8E-10 2.7E-14 109.6 12.4 208 115-344 63-295 (359)
194 2pbf_A Protein-L-isoaspartate 99.1 3E-10 1E-14 104.8 8.8 101 230-345 80-194 (227)
195 2pjd_A Ribosomal RNA small sub 99.1 2.6E-10 8.7E-15 112.8 8.7 116 231-357 197-317 (343)
196 1i1n_A Protein-L-isoaspartate 99.1 3.5E-10 1.2E-14 104.3 9.1 97 230-345 77-183 (226)
197 3dou_A Ribosomal RNA large sub 99.1 2.9E-10 9.8E-15 103.2 8.2 121 230-359 25-154 (191)
198 1dl5_A Protein-L-isoaspartate 99.1 7.7E-10 2.6E-14 108.1 11.7 98 230-346 75-177 (317)
199 3c0k_A UPF0064 protein YCCW; P 99.1 1.7E-09 5.9E-14 108.9 14.6 131 230-364 220-364 (396)
200 3gwz_A MMCR; methyltransferase 99.0 7.6E-10 2.6E-14 110.4 11.8 101 230-343 202-306 (369)
201 2as0_A Hypothetical protein PH 99.0 2.2E-09 7.6E-14 108.1 15.0 113 230-346 217-337 (396)
202 1jg1_A PIMT;, protein-L-isoasp 99.0 4E-10 1.4E-14 104.9 8.9 99 230-348 91-193 (235)
203 3gnl_A Uncharacterized protein 99.0 1.3E-09 4.5E-14 102.7 11.7 117 230-364 21-143 (244)
204 1tw3_A COMT, carminomycin 4-O- 99.0 9.6E-10 3.3E-14 108.8 11.2 102 230-344 183-288 (360)
205 1ne2_A Hypothetical protein TA 99.0 1.7E-09 5.8E-14 97.9 11.8 112 230-361 51-162 (200)
206 3gdh_A Trimethylguanosine synt 99.0 5.4E-11 1.8E-15 110.9 1.9 96 231-342 79-179 (241)
207 3iv6_A Putative Zn-dependent a 99.0 5.1E-10 1.8E-14 106.7 8.4 106 230-346 45-150 (261)
208 2igt_A SAM dependent methyltra 99.0 2.1E-09 7E-14 106.1 12.4 109 231-344 154-272 (332)
209 2g72_A Phenylethanolamine N-me 99.0 2E-10 6.8E-15 110.3 4.9 131 230-365 71-251 (289)
210 3r0q_C Probable protein argini 99.0 1.7E-09 5.8E-14 108.3 11.8 101 230-342 63-167 (376)
211 1g6q_1 HnRNP arginine N-methyl 99.0 2.2E-09 7.4E-14 105.5 12.3 100 231-341 39-142 (328)
212 2oxt_A Nucleoside-2'-O-methylt 99.0 1.9E-10 6.5E-15 110.0 4.6 102 230-345 74-186 (265)
213 3m4x_A NOL1/NOP2/SUN family pr 99.0 1.6E-09 5.4E-14 111.2 11.7 111 230-344 105-234 (456)
214 4e2x_A TCAB9; kijanose, tetron 99.0 2.7E-10 9.1E-15 115.2 5.9 101 230-345 107-209 (416)
215 2i62_A Nicotinamide N-methyltr 99.0 1.8E-10 6.2E-15 108.2 3.9 132 230-367 56-236 (265)
216 1af7_A Chemotaxis receptor met 99.0 4.8E-10 1.6E-14 107.7 6.8 102 231-343 106-251 (274)
217 2zfu_A Nucleomethylin, cerebra 99.0 4.4E-10 1.5E-14 102.7 6.3 106 230-365 67-174 (215)
218 1u2z_A Histone-lysine N-methyl 99.0 9.4E-10 3.2E-14 112.0 9.3 104 230-343 242-358 (433)
219 2wa2_A Non-structural protein 99.0 2.5E-10 8.7E-15 109.7 4.7 102 230-344 82-193 (276)
220 1vbf_A 231AA long hypothetical 99.0 9.4E-10 3.2E-14 101.6 8.1 97 230-347 70-168 (231)
221 2y1w_A Histone-arginine methyl 99.0 1.9E-09 6.4E-14 106.8 10.7 101 230-343 50-154 (348)
222 2ip2_A Probable phenazine-spec 99.0 1.3E-09 4.5E-14 106.7 9.3 98 232-343 169-271 (334)
223 2cmg_A Spermidine synthase; tr 99.0 1.2E-09 4.2E-14 104.2 8.6 107 230-359 72-190 (262)
224 3reo_A (ISO)eugenol O-methyltr 98.9 1.1E-09 3.9E-14 109.2 8.6 97 230-343 203-299 (368)
225 2a14_A Indolethylamine N-methy 98.9 2E-10 6.9E-15 109.1 2.9 130 230-366 55-234 (263)
226 2ih2_A Modification methylase 98.9 8.4E-10 2.9E-14 111.4 7.3 119 231-362 40-186 (421)
227 1sqg_A SUN protein, FMU protei 98.9 1.1E-08 3.6E-13 104.3 15.4 111 230-344 246-374 (429)
228 3fzg_A 16S rRNA methylase; met 98.9 2.6E-09 8.8E-14 96.8 9.5 96 231-342 50-150 (200)
229 2frx_A Hypothetical protein YE 98.9 5.5E-09 1.9E-13 107.9 13.0 110 231-344 118-246 (479)
230 3sso_A Methyltransferase; macr 98.9 6.7E-10 2.3E-14 111.5 5.8 100 230-343 216-323 (419)
231 1r18_A Protein-L-isoaspartate( 98.9 8.8E-10 3E-14 101.9 6.3 96 231-345 85-195 (227)
232 4a6d_A Hydroxyindole O-methylt 98.9 2.5E-09 8.5E-14 106.1 9.9 100 230-343 179-282 (353)
233 2qm3_A Predicted methyltransfe 98.9 1.2E-08 3.9E-13 102.1 14.4 121 231-364 173-303 (373)
234 3p9c_A Caffeic acid O-methyltr 98.9 2.2E-09 7.5E-14 107.0 8.8 96 230-343 201-297 (364)
235 3hp7_A Hemolysin, putative; st 98.9 1.2E-09 4E-14 105.8 6.3 99 230-343 85-184 (291)
236 1fp1_D Isoliquiritigenin 2'-O- 98.9 1.9E-09 6.5E-14 107.5 8.0 97 230-343 209-305 (372)
237 4dmg_A Putative uncharacterize 98.9 2.3E-08 7.8E-13 100.8 16.0 124 231-363 215-350 (393)
238 2yxl_A PH0851 protein, 450AA l 98.9 7.3E-09 2.5E-13 106.2 12.5 112 230-344 259-389 (450)
239 3m6w_A RRNA methylase; rRNA me 98.9 6.8E-09 2.3E-13 106.6 12.0 110 230-344 101-229 (464)
240 2qfm_A Spermine synthase; sper 98.9 1.6E-08 5.6E-13 100.2 13.5 113 230-347 188-317 (364)
241 3bzb_A Uncharacterized protein 98.9 2.1E-08 7.3E-13 96.2 14.0 129 230-367 79-234 (281)
242 1fp2_A Isoflavone O-methyltran 98.9 3E-09 1E-13 105.2 8.1 97 230-343 188-287 (352)
243 2ld4_A Anamorsin; methyltransf 98.9 5.5E-09 1.9E-13 92.5 8.9 107 230-362 12-128 (176)
244 3lst_A CALO1 methyltransferase 98.9 3.3E-09 1.1E-13 104.8 7.9 101 230-344 184-286 (348)
245 1uwv_A 23S rRNA (uracil-5-)-me 98.9 2.3E-08 7.7E-13 102.0 14.3 121 230-366 286-410 (433)
246 2xyq_A Putative 2'-O-methyl tr 98.8 2.4E-09 8.1E-14 103.6 6.4 117 230-363 63-190 (290)
247 3opn_A Putative hemolysin; str 98.8 3.9E-09 1.3E-13 98.8 7.5 99 230-343 37-136 (232)
248 2yx1_A Hypothetical protein MJ 98.8 6.3E-09 2.2E-13 102.6 9.4 107 230-360 195-306 (336)
249 2qy6_A UPF0209 protein YFCK; s 98.8 1.2E-08 4E-13 97.1 10.8 126 230-364 60-229 (257)
250 2p41_A Type II methyltransfera 98.8 3.2E-09 1.1E-13 103.5 6.7 102 231-345 83-192 (305)
251 3k6r_A Putative transferase PH 98.8 5.6E-09 1.9E-13 100.4 8.2 95 230-343 125-224 (278)
252 3v97_A Ribosomal RNA large sub 98.8 2.7E-08 9.2E-13 107.4 13.7 126 230-363 539-675 (703)
253 3b3j_A Histone-arginine methyl 98.8 6.2E-09 2.1E-13 107.6 8.4 100 230-342 158-261 (480)
254 4hc4_A Protein arginine N-meth 98.8 2.1E-08 7.1E-13 100.4 11.6 100 231-342 84-187 (376)
255 2jjq_A Uncharacterized RNA met 98.8 4.3E-08 1.5E-12 99.7 14.0 104 230-354 290-397 (425)
256 3giw_A Protein of unknown func 98.8 2.4E-08 8.1E-13 95.6 11.2 125 231-361 79-221 (277)
257 2dul_A N(2),N(2)-dimethylguano 98.8 2.9E-08 1E-12 99.5 12.0 98 231-344 48-164 (378)
258 1zg3_A Isoflavanone 4'-O-methy 98.7 1.1E-08 3.7E-13 101.4 7.6 96 231-343 194-292 (358)
259 3bt7_A TRNA (uracil-5-)-methyl 98.7 7.6E-08 2.6E-12 96.0 12.9 111 231-358 214-340 (369)
260 1zq9_A Probable dimethyladenos 98.7 2.1E-08 7.3E-13 96.5 8.5 73 230-311 28-105 (285)
261 3ldu_A Putative methylase; str 98.7 7.5E-08 2.6E-12 96.7 11.8 111 231-351 196-351 (385)
262 3ldg_A Putative uncharacterize 98.7 1.2E-07 4.1E-12 95.2 12.8 111 231-351 195-350 (384)
263 3k0b_A Predicted N6-adenine-sp 98.7 8.8E-08 3E-12 96.5 11.8 111 231-351 202-357 (393)
264 2f8l_A Hypothetical protein LM 98.7 3.8E-08 1.3E-12 97.1 8.6 125 231-362 131-278 (344)
265 3axs_A Probable N(2),N(2)-dime 98.6 1.6E-07 5.4E-12 94.5 10.8 99 231-345 53-159 (392)
266 2h1r_A Dimethyladenosine trans 98.6 5.9E-08 2E-12 94.1 6.5 73 230-311 42-118 (299)
267 4azs_A Methyltransferase WBDD; 98.6 1.8E-07 6.2E-12 98.6 10.5 100 231-344 67-173 (569)
268 2b9e_A NOL1/NOP2/SUN domain fa 98.6 5.9E-07 2E-11 87.5 13.2 112 230-344 102-234 (309)
269 2okc_A Type I restriction enzy 98.5 1.5E-07 5.1E-12 96.2 8.8 109 231-347 172-310 (445)
270 3lcv_B Sisomicin-gentamicin re 98.5 4.6E-07 1.6E-11 85.8 9.3 118 231-363 133-265 (281)
271 1yub_A Ermam, rRNA methyltrans 98.4 4.1E-09 1.4E-13 99.1 -6.3 105 230-344 29-145 (245)
272 3gru_A Dimethyladenosine trans 98.4 7.7E-07 2.6E-11 86.1 8.6 72 230-308 50-123 (295)
273 1m6y_A S-adenosyl-methyltransf 98.4 6.9E-07 2.3E-11 86.8 8.2 77 230-308 26-107 (301)
274 2r6z_A UPF0341 protein in RSP 98.3 7.4E-07 2.5E-11 84.6 6.9 71 231-306 84-168 (258)
275 3v97_A Ribosomal RNA large sub 98.3 2.6E-06 9E-11 91.8 11.9 113 231-350 191-353 (703)
276 3frh_A 16S rRNA methylase; met 98.3 3.2E-06 1.1E-10 79.2 10.7 96 230-342 105-204 (253)
277 1qam_A ERMC' methyltransferase 98.3 4.3E-06 1.5E-10 78.4 11.4 71 230-308 30-103 (244)
278 3o4f_A Spermidine synthase; am 98.3 3.9E-06 1.3E-10 80.9 10.9 124 229-360 82-218 (294)
279 3tqs_A Ribosomal RNA small sub 98.2 1.9E-06 6.4E-11 81.7 7.5 74 230-308 29-105 (255)
280 2wk1_A NOVP; transferase, O-me 98.2 5.9E-06 2E-10 79.3 10.9 99 231-342 107-242 (282)
281 3ftd_A Dimethyladenosine trans 98.2 4.5E-06 1.5E-10 78.7 10.0 74 230-308 31-104 (249)
282 3ll7_A Putative methyltransfer 98.2 2.5E-06 8.7E-11 86.1 8.1 71 231-306 94-170 (410)
283 2ar0_A M.ecoki, type I restric 98.2 2.6E-06 8.8E-11 89.2 8.3 124 231-360 170-333 (541)
284 3s1s_A Restriction endonucleas 98.2 5E-06 1.7E-10 89.6 10.2 124 231-360 322-487 (878)
285 3uzu_A Ribosomal RNA small sub 98.1 2.2E-06 7.5E-11 82.3 5.9 59 230-288 42-102 (279)
286 3lkd_A Type I restriction-modi 98.1 1.4E-05 4.7E-10 83.7 12.3 128 230-361 221-380 (542)
287 3fut_A Dimethyladenosine trans 98.1 3.4E-06 1.2E-10 80.6 6.6 70 231-308 48-119 (271)
288 3cvo_A Methyltransferase-like 98.1 2.2E-05 7.6E-10 71.7 11.5 96 231-342 31-152 (202)
289 2oyr_A UPF0341 protein YHIQ; a 98.0 4.4E-06 1.5E-10 79.2 5.5 69 232-306 90-171 (258)
290 2efj_A 3,7-dimethylxanthine me 98.0 2.5E-05 8.6E-10 78.1 10.8 112 231-344 53-225 (384)
291 4fzv_A Putative methyltransfer 98.0 8.9E-05 3E-09 73.5 14.1 124 230-357 148-303 (359)
292 3c6k_A Spermine synthase; sper 97.9 5.3E-05 1.8E-09 75.4 12.0 115 230-346 205-333 (381)
293 3khk_A Type I restriction-modi 97.9 1E-05 3.5E-10 84.7 6.7 124 232-361 246-418 (544)
294 3evf_A RNA-directed RNA polyme 97.9 2E-05 6.9E-10 74.9 7.9 120 231-359 75-201 (277)
295 1qyr_A KSGA, high level kasuga 97.8 1.5E-05 5E-10 75.4 5.6 76 230-308 21-99 (252)
296 3b5i_A S-adenosyl-L-methionine 97.8 4.2E-05 1.4E-09 76.3 8.6 113 230-344 52-225 (374)
297 4gqb_A Protein arginine N-meth 97.7 9.6E-05 3.3E-09 78.3 9.3 99 231-341 358-464 (637)
298 3ua3_A Protein arginine N-meth 97.6 9.1E-05 3.1E-09 78.8 8.5 104 231-341 410-531 (745)
299 1m6e_X S-adenosyl-L-methionnin 97.5 3.5E-05 1.2E-09 76.4 3.5 112 231-344 52-209 (359)
300 2k4m_A TR8_protein, UPF0146 pr 97.5 0.00011 3.6E-09 63.4 5.9 85 231-344 36-121 (153)
301 3gcz_A Polyprotein; flavivirus 97.5 9.5E-05 3.2E-09 70.4 5.3 122 230-359 90-218 (282)
302 3vyw_A MNMC2; tRNA wobble urid 97.4 0.00079 2.7E-08 65.1 10.7 125 231-367 97-245 (308)
303 1wg8_A Predicted S-adenosylmet 97.3 0.00074 2.5E-08 64.4 9.4 74 230-306 22-96 (285)
304 3eld_A Methyltransferase; flav 97.1 0.00058 2E-08 65.4 6.3 122 230-359 81-208 (300)
305 3lkz_A Non-structural protein 97.0 0.0023 7.8E-08 61.2 9.6 108 231-347 95-207 (321)
306 3p8z_A Mtase, non-structural p 97.0 0.00054 1.8E-08 63.5 4.9 105 231-345 79-187 (267)
307 4auk_A Ribosomal RNA large sub 96.9 0.0032 1.1E-07 62.3 9.5 68 230-307 211-278 (375)
308 2px2_A Genome polyprotein [con 96.6 0.0036 1.2E-07 58.8 7.3 97 230-346 73-185 (269)
309 3tka_A Ribosomal RNA small sub 96.6 0.0034 1.2E-07 61.3 7.4 76 230-306 57-135 (347)
310 3ufb_A Type I restriction-modi 96.6 0.0083 2.8E-07 62.4 10.4 126 231-360 218-383 (530)
311 3pvc_A TRNA 5-methylaminomethy 96.3 0.0076 2.6E-07 64.5 8.5 126 231-365 59-228 (689)
312 3ps9_A TRNA 5-methylaminomethy 96.2 0.011 3.9E-07 62.9 9.2 125 231-364 67-235 (676)
313 2zig_A TTHA0409, putative modi 95.7 0.026 9.1E-07 53.9 8.4 85 275-364 19-130 (297)
314 3r24_A NSP16, 2'-O-methyl tran 95.6 0.042 1.4E-06 52.6 8.8 100 229-344 108-217 (344)
315 3tos_A CALS11; methyltransfera 95.5 0.069 2.3E-06 50.2 10.2 102 231-342 70-215 (257)
316 1i4w_A Mitochondrial replicati 95.5 0.021 7.4E-07 56.2 6.9 58 231-288 59-117 (353)
317 1boo_A Protein (N-4 cytosine-s 95.4 0.046 1.6E-06 53.0 9.0 84 276-364 13-114 (323)
318 2zig_A TTHA0409, putative modi 95.4 0.023 7.7E-07 54.4 6.7 37 230-268 235-271 (297)
319 1g60_A Adenine-specific methyl 94.6 0.1 3.5E-06 48.7 8.5 80 278-363 5-92 (260)
320 1g55_A DNA cytosine methyltran 94.5 0.1 3.6E-06 50.9 8.7 129 231-364 2-143 (343)
321 3g7u_A Cytosine-specific methy 94.1 0.4 1.4E-05 47.4 11.9 129 232-364 3-145 (376)
322 1f8f_A Benzyl alcohol dehydrog 93.9 0.2 6.9E-06 49.0 9.3 95 230-343 190-288 (371)
323 2oo3_A Protein involved in cat 93.8 0.42 1.4E-05 45.4 11.0 121 231-362 92-218 (283)
324 1pl8_A Human sorbitol dehydrog 93.4 0.28 9.4E-06 47.7 9.3 98 230-343 171-272 (356)
325 3jv7_A ADH-A; dehydrogenase, n 93.0 0.23 7.8E-06 48.0 8.1 98 230-343 171-269 (345)
326 3iht_A S-adenosyl-L-methionine 92.9 0.17 5.9E-06 43.7 5.9 105 231-342 41-145 (174)
327 2dph_A Formaldehyde dismutase; 92.4 0.22 7.5E-06 49.3 7.2 107 230-343 185-298 (398)
328 1eg2_A Modification methylase 92.2 0.3 1E-05 47.1 7.7 65 278-347 39-109 (319)
329 3fpc_A NADP-dependent alcohol 92.1 0.3 1E-05 47.3 7.5 96 230-343 166-265 (352)
330 1g60_A Adenine-specific methyl 91.8 0.15 5.2E-06 47.6 4.8 37 230-268 212-248 (260)
331 1e3j_A NADP(H)-dependent ketos 91.4 0.73 2.5E-05 44.6 9.5 97 230-343 168-270 (352)
332 3fwz_A Inner membrane protein 91.3 1.6 5.6E-05 36.1 10.4 112 231-363 7-120 (140)
333 3s2e_A Zinc-containing alcohol 90.7 0.78 2.7E-05 44.1 8.9 96 230-343 166-262 (340)
334 2c7p_A Modification methylase 90.4 2.1 7.1E-05 41.3 11.5 123 231-364 11-147 (327)
335 2py6_A Methyltransferase FKBM; 90.3 0.57 2E-05 46.7 7.6 57 230-286 226-292 (409)
336 2h6e_A ADH-4, D-arabinose 1-de 90.2 0.88 3E-05 43.8 8.8 95 231-343 171-268 (344)
337 1cdo_A Alcohol dehydrogenase; 90.1 0.7 2.4E-05 45.1 8.0 95 230-343 192-293 (374)
338 1kol_A Formaldehyde dehydrogen 90.1 0.63 2.2E-05 45.8 7.7 106 230-343 185-299 (398)
339 4ej6_A Putative zinc-binding d 90.1 1.4 4.7E-05 43.0 10.1 100 230-343 182-283 (370)
340 3two_A Mannitol dehydrogenase; 89.9 0.55 1.9E-05 45.4 6.9 88 230-343 176-264 (348)
341 3qv2_A 5-cytosine DNA methyltr 89.6 1.6 5.6E-05 42.1 10.0 128 231-364 10-154 (327)
342 3m6i_A L-arabinitol 4-dehydrog 89.6 1.6 5.3E-05 42.3 10.0 97 230-343 179-282 (363)
343 1p0f_A NADP-dependent alcohol 89.4 0.71 2.4E-05 45.0 7.4 97 230-343 191-292 (373)
344 4dvj_A Putative zinc-dependent 89.3 0.68 2.3E-05 45.2 7.2 96 231-343 172-269 (363)
345 2jhf_A Alcohol dehydrogenase E 89.3 0.91 3.1E-05 44.2 8.1 95 230-343 191-292 (374)
346 1e3i_A Alcohol dehydrogenase, 88.8 0.96 3.3E-05 44.1 7.9 97 230-343 195-296 (376)
347 2fzw_A Alcohol dehydrogenase c 88.8 0.84 2.9E-05 44.4 7.4 97 230-343 190-291 (373)
348 1vj0_A Alcohol dehydrogenase, 88.7 1.1 3.7E-05 44.0 8.2 96 230-343 195-297 (380)
349 2d8a_A PH0655, probable L-thre 88.3 0.93 3.2E-05 43.7 7.3 95 231-343 168-266 (348)
350 3uko_A Alcohol dehydrogenase c 87.9 0.91 3.1E-05 44.4 7.0 97 230-343 193-294 (378)
351 3uog_A Alcohol dehydrogenase; 87.0 2.6 9E-05 40.8 9.8 94 230-343 189-286 (363)
352 1pqw_A Polyketide synthase; ro 86.8 0.88 3E-05 39.9 5.7 95 230-344 38-137 (198)
353 1jvb_A NAD(H)-dependent alcoho 86.3 1.6 5.6E-05 41.9 7.8 98 230-343 170-270 (347)
354 4eez_A Alcohol dehydrogenase 1 85.6 3.3 0.00011 39.5 9.5 98 230-343 163-262 (348)
355 1v3u_A Leukotriene B4 12- hydr 85.2 2.4 8.3E-05 40.4 8.3 94 230-343 145-243 (333)
356 1uuf_A YAHK, zinc-type alcohol 84.7 2.3 7.8E-05 41.4 8.0 93 230-343 194-287 (369)
357 1rjd_A PPM1P, carboxy methyl t 84.5 6.9 0.00023 37.8 11.2 122 231-359 98-253 (334)
358 2hcy_A Alcohol dehydrogenase 1 84.4 1.7 5.7E-05 41.9 6.8 94 230-343 169-268 (347)
359 4a2c_A Galactitol-1-phosphate 82.0 3.9 0.00013 39.0 8.3 98 230-343 160-259 (346)
360 3fbg_A Putative arginate lyase 81.6 3.1 0.00011 39.9 7.5 94 231-342 151-246 (346)
361 2eih_A Alcohol dehydrogenase; 81.6 2.5 8.7E-05 40.5 6.8 94 230-343 166-264 (343)
362 2b5w_A Glucose dehydrogenase; 81.4 2.8 9.5E-05 40.5 7.1 92 232-343 174-272 (357)
363 3llv_A Exopolyphosphatase-rela 81.2 11 0.00037 30.7 9.8 109 232-362 7-117 (141)
364 1rjw_A ADH-HT, alcohol dehydro 81.1 5.4 0.00018 38.1 8.9 96 230-343 164-260 (339)
365 3ip1_A Alcohol dehydrogenase, 80.9 3.4 0.00012 40.7 7.6 97 230-343 213-317 (404)
366 2qrv_A DNA (cytosine-5)-methyl 80.8 3 0.0001 39.7 6.9 77 230-308 15-92 (295)
367 4b7c_A Probable oxidoreductase 80.5 4.9 0.00017 38.2 8.4 96 230-343 149-247 (336)
368 4eye_A Probable oxidoreductase 80.4 3.1 0.0001 39.9 6.9 94 230-343 159-256 (342)
369 2j3h_A NADP-dependent oxidored 80.0 3.4 0.00012 39.5 7.1 94 230-343 155-254 (345)
370 3gms_A Putative NADPH:quinone 79.2 1.8 6.1E-05 41.5 4.8 94 230-343 144-242 (340)
371 1yb5_A Quinone oxidoreductase; 79.2 5.2 0.00018 38.5 8.1 94 230-343 170-268 (351)
372 1id1_A Putative potassium chan 78.5 8.6 0.00029 31.9 8.4 113 232-362 4-119 (153)
373 3l9w_A Glutathione-regulated p 78.1 9 0.00031 38.1 9.7 104 231-351 4-109 (413)
374 3l4b_C TRKA K+ channel protien 77.4 11 0.00038 33.3 9.3 102 234-351 3-106 (218)
375 4h0n_A DNMT2; SAH binding, tra 77.4 1.9 6.6E-05 41.7 4.4 127 232-364 4-143 (333)
376 4had_A Probable oxidoreductase 77.3 8.3 0.00028 36.8 9.0 70 232-310 24-97 (350)
377 4dcm_A Ribosomal RNA large sub 77.2 8.9 0.00031 37.5 9.3 109 231-360 39-152 (375)
378 2aef_A Calcium-gated potassium 76.5 18 0.00061 32.2 10.5 101 231-350 9-111 (234)
379 1piw_A Hypothetical zinc-type 74.9 2.9 0.0001 40.4 5.0 93 230-343 179-275 (360)
380 2dq4_A L-threonine 3-dehydroge 73.7 3.4 0.00012 39.6 5.1 96 230-343 164-261 (343)
381 1qor_A Quinone oxidoreductase; 73.5 4.2 0.00014 38.5 5.7 96 230-343 140-238 (327)
382 3gaz_A Alcohol dehydrogenase s 73.3 6.9 0.00023 37.4 7.2 94 230-343 150-245 (343)
383 3qwb_A Probable quinone oxidor 72.4 5.4 0.00019 37.9 6.1 94 230-343 148-246 (334)
384 2cdc_A Glucose dehydrogenase g 72.2 6.4 0.00022 38.0 6.7 92 231-343 181-277 (366)
385 2c0c_A Zinc binding alcohol de 70.9 14 0.00049 35.5 8.9 93 230-343 163-260 (362)
386 3e18_A Oxidoreductase; dehydro 69.3 27 0.00092 33.5 10.5 107 232-362 6-117 (359)
387 4hkt_A Inositol 2-dehydrogenas 69.0 35 0.0012 32.1 11.1 106 233-363 5-116 (331)
388 1wly_A CAAR, 2-haloacrylate re 69.0 11 0.00038 35.6 7.5 94 230-343 145-243 (333)
389 3jyn_A Quinone oxidoreductase; 68.4 5.1 0.00017 38.0 4.9 94 230-343 140-238 (325)
390 3c85_A Putative glutathione-re 68.2 53 0.0018 27.7 11.2 104 231-351 39-146 (183)
391 1boo_A Protein (N-4 cytosine-s 66.4 5.1 0.00018 38.3 4.5 39 230-270 252-290 (323)
392 2j8z_A Quinone oxidoreductase; 65.6 9.2 0.00032 36.7 6.2 94 230-343 162-260 (354)
393 2zb4_A Prostaglandin reductase 65.3 21 0.00073 34.0 8.8 94 232-343 162-259 (357)
394 3gqv_A Enoyl reductase; medium 65.0 23 0.00079 34.1 9.0 96 230-343 164-262 (371)
395 1iz0_A Quinone oxidoreductase; 64.9 14 0.00049 34.3 7.3 90 230-343 125-217 (302)
396 3ohs_X Trans-1,2-dihydrobenzen 63.0 61 0.0021 30.4 11.5 108 233-363 4-119 (334)
397 2cf5_A Atccad5, CAD, cinnamyl 62.4 11 0.00037 36.2 6.1 93 230-343 180-274 (357)
398 3i23_A Oxidoreductase, GFO/IDH 62.0 15 0.00051 35.1 7.0 109 233-363 4-118 (349)
399 3goh_A Alcohol dehydrogenase, 60.8 6.2 0.00021 37.2 3.9 86 230-343 142-228 (315)
400 3moi_A Probable dehydrogenase; 60.6 33 0.0011 33.2 9.3 68 233-310 4-75 (387)
401 3e9m_A Oxidoreductase, GFO/IDH 59.9 35 0.0012 32.2 9.1 109 232-363 6-120 (330)
402 3db2_A Putative NADPH-dependen 59.7 76 0.0026 30.0 11.6 107 232-362 6-118 (354)
403 4dup_A Quinone oxidoreductase; 59.5 21 0.0007 34.2 7.4 96 230-343 167-264 (353)
404 1lnq_A MTHK channels, potassiu 59.3 43 0.0015 31.6 9.7 100 232-350 116-217 (336)
405 3mz0_A Inositol 2-dehydrogenas 58.9 48 0.0016 31.3 10.0 108 233-362 4-118 (344)
406 3dmg_A Probable ribosomal RNA 58.9 38 0.0013 33.0 9.3 108 231-358 46-153 (381)
407 4gqa_A NAD binding oxidoreduct 58.4 31 0.0011 33.6 8.7 71 232-311 27-108 (412)
408 1yqd_A Sinapyl alcohol dehydro 58.1 20 0.00069 34.5 7.2 93 230-343 187-281 (366)
409 3me5_A Cytosine-specific methy 58.1 1E+02 0.0035 31.1 12.6 131 231-364 88-254 (482)
410 2km1_A Protein DRE2; yeast, an 58.0 6.7 0.00023 32.9 3.1 42 295-342 55-96 (136)
411 1xa0_A Putative NADPH dependen 57.8 12 0.00042 35.2 5.4 91 233-343 152-245 (328)
412 3rc1_A Sugar 3-ketoreductase; 56.9 79 0.0027 30.0 11.2 108 232-363 28-142 (350)
413 3ezy_A Dehydrogenase; structur 55.3 1E+02 0.0035 29.0 11.6 108 233-363 4-117 (344)
414 4gmf_A Yersiniabactin biosynth 53.5 92 0.0032 30.2 11.1 70 231-312 7-79 (372)
415 2uyo_A Hypothetical protein ML 52.8 56 0.0019 30.9 9.1 106 231-344 103-218 (310)
416 2g1u_A Hypothetical protein TM 51.9 42 0.0014 27.6 7.3 105 231-350 19-124 (155)
417 3kux_A Putative oxidoreductase 51.5 41 0.0014 32.0 8.1 69 232-311 8-79 (352)
418 1eg2_A Modification methylase 50.8 13 0.00043 35.6 4.2 33 230-264 242-274 (319)
419 4a27_A Synaptic vesicle membra 50.1 16 0.00054 34.9 4.8 94 230-343 142-237 (349)
420 3evn_A Oxidoreductase, GFO/IDH 50.0 29 0.001 32.7 6.7 109 232-363 6-120 (329)
421 3nx4_A Putative oxidoreductase 49.9 26 0.00088 32.8 6.3 90 233-343 149-240 (324)
422 1h2b_A Alcohol dehydrogenase; 49.8 28 0.00095 33.3 6.6 48 230-277 186-234 (359)
423 4h3v_A Oxidoreductase domain p 49.7 36 0.0012 32.4 7.4 69 233-311 8-87 (390)
424 3cea_A MYO-inositol 2-dehydrog 49.6 1.4E+02 0.0048 27.8 11.6 110 231-363 8-125 (346)
425 2vz8_A Fatty acid synthase; tr 49.6 3.4 0.00012 50.6 -0.1 98 231-343 1241-1347(2512)
426 3krt_A Crotonyl COA reductase; 49.4 38 0.0013 33.6 7.7 95 230-343 228-343 (456)
427 3v5n_A Oxidoreductase; structu 48.0 98 0.0034 30.2 10.4 78 231-310 37-121 (417)
428 1vpt_A VP39; RNA CAP, poly(A) 48.0 21 0.00071 34.3 5.0 50 231-283 76-129 (348)
429 3ubt_Y Modification methylase 47.6 28 0.00097 32.7 6.2 121 233-363 2-136 (331)
430 3q2i_A Dehydrogenase; rossmann 45.5 1.4E+02 0.0049 28.0 11.0 70 231-310 13-86 (354)
431 3mag_A VP39; methylated adenin 44.2 12 0.00042 35.4 2.8 51 230-283 60-114 (307)
432 3uuw_A Putative oxidoreductase 43.9 98 0.0033 28.5 9.3 106 232-363 7-119 (308)
433 2vn8_A Reticulon-4-interacting 43.7 54 0.0019 31.4 7.6 96 230-344 183-280 (375)
434 3ec7_A Putative dehydrogenase; 43.6 1.4E+02 0.0049 28.2 10.6 110 231-362 23-139 (357)
435 1lss_A TRK system potassium up 43.2 1.2E+02 0.004 23.7 11.1 112 231-363 4-117 (140)
436 3euw_A MYO-inositol dehydrogen 42.7 1.2E+02 0.004 28.5 9.8 107 232-362 5-117 (344)
437 3ic5_A Putative saccharopine d 42.0 1.1E+02 0.0037 23.0 9.4 67 231-306 5-76 (118)
438 4a0s_A Octenoyl-COA reductase/ 41.9 57 0.0019 32.1 7.6 94 230-343 220-335 (447)
439 1tt7_A YHFP; alcohol dehydroge 41.8 15 0.00053 34.5 3.2 90 233-343 153-246 (330)
440 2vhw_A Alanine dehydrogenase; 41.7 76 0.0026 30.7 8.3 99 230-343 167-267 (377)
441 3swr_A DNA (cytosine-5)-methyl 39.2 67 0.0023 35.7 8.1 127 231-363 540-695 (1002)
442 1zkd_A DUF185; NESG, RPR58, st 39.0 26 0.0009 34.5 4.5 37 231-267 81-124 (387)
443 1apy_A Aspartylglucosaminidase 38.8 1E+02 0.0034 26.4 7.6 65 9-78 76-140 (162)
444 3gdo_A Uncharacterized oxidore 38.6 1.5E+02 0.0052 28.0 9.9 69 232-311 6-77 (358)
445 3u3x_A Oxidoreductase; structu 38.0 2.4E+02 0.0081 26.7 11.2 71 231-310 26-99 (361)
446 2nvw_A Galactose/lactose metab 37.7 2.1E+02 0.0073 28.5 11.2 72 231-310 39-119 (479)
447 3ggo_A Prephenate dehydrogenas 37.0 1.9E+02 0.0064 27.0 10.1 105 232-357 34-142 (314)
448 3m2t_A Probable dehydrogenase; 36.5 97 0.0033 29.5 8.1 69 232-308 6-77 (359)
449 2ixa_A Alpha-N-acetylgalactosa 36.5 2.7E+02 0.0094 27.1 11.7 74 231-310 20-102 (444)
450 4gbj_A 6-phosphogluconate dehy 36.4 46 0.0016 31.1 5.6 109 233-364 7-118 (297)
451 1zh8_A Oxidoreductase; TM0312, 36.0 2.7E+02 0.0093 25.9 11.5 72 230-310 17-93 (340)
452 1ydw_A AX110P-like protein; st 35.7 2.8E+02 0.0096 26.0 11.9 111 232-363 7-124 (362)
453 2eez_A Alanine dehydrogenase; 35.4 1E+02 0.0034 29.6 8.1 98 231-343 166-265 (369)
454 3b1f_A Putative prephenate deh 35.4 1.5E+02 0.005 26.9 8.9 90 232-342 7-99 (290)
455 4dkj_A Cytosine-specific methy 35.1 77 0.0026 31.2 7.2 41 231-271 10-55 (403)
456 3tqh_A Quinone oxidoreductase; 34.3 98 0.0034 28.7 7.6 90 230-343 152-244 (321)
457 2o3j_A UDP-glucose 6-dehydroge 34.0 2E+02 0.0069 28.7 10.3 119 232-359 10-151 (481)
458 1tlt_A Putative oxidoreductase 32.6 2.3E+02 0.0078 26.1 9.9 106 232-363 6-118 (319)
459 3trk_A Nonstructural polyprote 32.4 42 0.0014 31.4 4.3 45 298-344 210-259 (324)
460 3e82_A Putative oxidoreductase 32.2 2E+02 0.0067 27.3 9.5 106 232-362 8-119 (364)
461 3dty_A Oxidoreductase, GFO/IDH 31.8 2.6E+02 0.0089 26.7 10.5 77 232-310 13-96 (398)
462 3c1a_A Putative oxidoreductase 31.1 1.7E+02 0.0058 27.0 8.7 107 232-363 11-122 (315)
463 2glx_A 1,5-anhydro-D-fructose 29.7 3.3E+02 0.011 25.0 10.6 106 233-363 2-115 (332)
464 3fhl_A Putative oxidoreductase 29.5 92 0.0031 29.6 6.6 68 232-310 6-76 (362)
465 3pi7_A NADH oxidoreductase; gr 29.3 29 0.00098 33.0 2.9 92 232-343 166-262 (349)
466 4gx0_A TRKA domain protein; me 28.6 1.4E+02 0.0047 30.3 8.1 101 232-350 128-230 (565)
467 3ulk_A Ketol-acid reductoisome 28.6 1.9E+02 0.0066 29.1 8.7 92 230-345 36-133 (491)
468 3btv_A Galactose/lactose metab 28.5 3.6E+02 0.012 26.3 10.9 72 232-310 21-100 (438)
469 1gu7_A Enoyl-[acyl-carrier-pro 28.3 59 0.002 30.8 5.0 97 231-343 167-274 (364)
470 3iei_A Leucine carboxyl methyl 27.8 3.9E+02 0.013 25.3 12.6 127 231-363 91-251 (334)
471 3f4l_A Putative oxidoreductase 27.8 61 0.0021 30.6 5.0 108 233-363 4-118 (345)
472 3obb_A Probable 3-hydroxyisobu 26.6 1.7E+02 0.0058 27.2 7.8 107 234-364 6-118 (300)
473 2hwk_A Helicase NSP2; rossman 26.4 91 0.0031 29.5 5.5 59 298-359 205-271 (320)
474 4fb5_A Probable oxidoreductase 26.2 2.4E+02 0.0083 26.3 9.0 72 231-311 25-106 (393)
475 4g65_A TRK system potassium up 26.0 2.1E+02 0.0073 28.3 8.8 71 231-306 3-75 (461)
476 3upl_A Oxidoreductase; rossman 26.0 1.9E+02 0.0063 28.9 8.2 75 231-311 23-119 (446)
477 4f3n_A Uncharacterized ACR, CO 25.7 25 0.00086 35.2 1.7 33 231-263 138-175 (432)
478 3e8x_A Putative NAD-dependent 25.4 3.2E+02 0.011 23.4 9.4 70 230-307 20-92 (236)
479 4a7p_A UDP-glucose dehydrogena 24.7 2.3E+02 0.0078 28.1 8.7 117 232-360 9-146 (446)
480 3s4y_A Thiamin pyrophosphokina 24.6 1.2E+02 0.0039 27.7 6.0 39 7-48 21-59 (247)
481 2p2s_A Putative oxidoreductase 23.8 2.1E+02 0.0073 26.5 8.0 107 232-363 5-119 (336)
482 1dlj_A UDP-glucose dehydrogena 23.1 2.6E+02 0.0088 27.1 8.6 111 234-357 3-131 (402)
483 2q3e_A UDP-glucose 6-dehydroge 22.6 4E+02 0.014 26.2 10.1 121 232-361 6-149 (467)
484 4gua_A Non-structural polyprot 22.4 95 0.0032 32.2 5.2 47 296-344 218-269 (670)
485 2y0c_A BCEC, UDP-glucose dehyd 22.2 4.9E+02 0.017 25.8 10.6 116 231-359 8-144 (478)
486 4gwg_A 6-phosphogluconate dehy 21.5 3.9E+02 0.013 26.8 9.7 114 232-363 5-123 (484)
487 4ft4_B DNA (cytosine-5)-methyl 20.8 5.1E+02 0.017 27.3 11.0 57 231-288 212-273 (784)
488 3g0o_A 3-hydroxyisobutyrate de 20.8 4.1E+02 0.014 24.1 9.2 110 231-363 7-122 (303)
489 3ca8_A Protein YDCF; two domai 20.2 2.5E+02 0.0084 25.8 7.3 33 6-40 36-70 (266)
No 1
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=100.00 E-value=4.8e-66 Score=511.45 Aligned_cols=211 Identities=27% Similarity=0.481 Sum_probs=196.7
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (416)
+++|+||++||||||||||||++|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|+
T Consensus 200 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~A~~ll~ka~~~g~~i~ 279 (415)
T 16pk_A 200 LGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVI 279 (415)
T ss_dssp HSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECTTHHHHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeEeCcHHHHHHHHHcCCCcCccccChhhHHHHHHHHHHHHhcCCEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeeecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHhh
Q 014919 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (416)
Q Consensus 82 lP~D~~v~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (416)
||+|++|++++ .+.+..++++++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++++
T Consensus 280 lPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDIGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~ 359 (415)
T 16pk_A 280 LPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRG 359 (415)
T ss_dssp CCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHH
T ss_pred CCceeehhhcccCCCceEEeehhcCCCCCEEeecCHHHHHHHHHHHHhCCEEEEECCcccccCchHHHHHHHHHHHHHhc
Confidence 99999999986 44566677889999999999999999999999999999999999999999999999999999999997
Q ss_pred hcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccc
Q 014919 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (416)
Q Consensus 161 ~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~ 214 (416)
+++.+.+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 360 t~~~~a~sIvGGGDt~aAv~~~G~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 414 (415)
T 16pk_A 360 THEHGLMSIIGGGDSASAAELSGEAKRMSHVST--GGGASLELLEGKTLPGVTVLDD 414 (415)
T ss_dssp HHHHCCEEEECSHHHHHHHHHTTCTTTSSEECS--CHHHHHHHHTTCCCHHHHTSCB
T ss_pred cCCCCCEEEECCcHHHHHHHHcCCccCceEEeC--ChHHHHHHHcCCCcchHHHhhc
Confidence 52122489999986 4457889999999999 8999999999999999999864
No 2
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=100.00 E-value=5.8e-66 Score=509.25 Aligned_cols=210 Identities=26% Similarity=0.503 Sum_probs=196.9
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (416)
+++|+||++||+|||||||||++|+||+++||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|+
T Consensus 181 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~SL~E~d~~~~a~~ll~ka~~~g~~i~ 260 (398)
T 1vpe_A 181 TYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELVEKAKEKGVEIV 260 (398)
T ss_dssp HHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHHHHHTSCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeEeCcHHHHHHHHHcCCCCCchhcChhhHHHHHHHHHHHHhcCCEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeeec-CCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHh
Q 014919 82 YPKDFWCTKIH-HPNQVEIFP-SHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCK 159 (416)
Q Consensus 82 lP~D~~v~~~~-~~~~~~~~~-~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~ 159 (416)
||+|++|++++ .+.+..+++ +++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||+++++++++
T Consensus 261 lPvD~vva~~f~~~a~~~~~~~~~~ip~~~m~lDIGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~ 340 (398)
T 1vpe_A 261 LPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAA 340 (398)
T ss_dssp CCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHH
T ss_pred CCceeehhhcccCCCCeEEecccccCCCCCEeeecCHHHHHHHHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHh
Confidence 99999999986 455666778 8999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccc
Q 014919 160 VSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (416)
Q Consensus 160 ~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~ 214 (416)
+++.++ +||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 341 ~t~~~~-~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 395 (398)
T 1vpe_A 341 LTEKGA-ITVVGGGDSAAAVNKFGLEDKFSHVST--GGGASLEFLEGKELPGIASMRI 395 (398)
T ss_dssp HHHTTC-EEEEESHHHHHHHHHTTCGGGSSEEES--CHHHHHHHHTSSCCHHHHTSCB
T ss_pred hccCCC-EEEECCcHHHHHHHHcCCcCCccEEeC--ChHHHHHHHcCCCCcHHHHHHh
Confidence 764443 89999886 4457889899999999 8999999999999999999865
No 3
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=100.00 E-value=1.3e-65 Score=509.39 Aligned_cols=209 Identities=24% Similarity=0.473 Sum_probs=196.2
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHH-cCCCCCCcccccCchHHHHHHHHHHhhCCCee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHA-LGLPVPPELVEKGANDAASDLIQFARDKHITI 80 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a-~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (416)
+++|+||++||+|||||||||++|+||+++||+|||||+||||||+| +|++||+|++|++.++.|++|+++|+++|++|
T Consensus 202 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~~G~~iG~Sl~e~d~~~~a~~il~~a~~~g~~i 281 (417)
T 3oz7_A 202 LENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQI 281 (417)
T ss_dssp HTSCCSSEEEEEECSCSTTSHHHHHHHHTTCSEEEEETTHHHHHHHHHHCCCBTTSCCCTTTHHHHHHHHHHHHHTTCEE
T ss_pred HcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEeccHHHHHHHHHHcCCccCchhcCccChHHHHHHHHHHHHcCCEE
Confidence 58999999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeee-cCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHH
Q 014919 81 LYPKDFWCTKIH-HPNQVEIF-PSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (416)
Q Consensus 81 ~lP~D~~v~~~~-~~~~~~~~-~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (416)
+||+|++|++++ .+++..++ +.++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++
T Consensus 282 ~LPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia 361 (417)
T 3oz7_A 282 FLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVV 361 (417)
T ss_dssp ECCSEEEEESSSSTTSCEEEEESSSCBCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSBCTTSSTTTHHHHHHHHHHH
T ss_pred ECCceeEEeecccCCCCeEEecccccCCCCCeeeecCHHHHHHHHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHH
Confidence 999999999987 45566676 6899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCccccc
Q 014919 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALD 213 (416)
Q Consensus 159 ~~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~ 213 (416)
++|+++ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.
T Consensus 362 ~~t~~~-a~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~ 416 (417)
T 3oz7_A 362 EVTKKG-AITIVGGGDTASLVEQQNKKNEISHVST--GGGASLELLEGKELPGVLALS 416 (417)
T ss_dssp HHHHHT-CEEEECSHHHHHHHHHTTCGGGSSEECS--CSHHHHHHHTTCCCHHHHTSC
T ss_pred hhccCC-CEEEEcCcHHHHHHHHcCCcCCccEEcC--ChHHHHHHHcCCCCcceeecc
Confidence 977555 489999886 4457889899999999 899999999999999999885
No 4
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=100.00 E-value=9.3e-66 Score=510.34 Aligned_cols=212 Identities=25% Similarity=0.458 Sum_probs=197.8
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCC-CCCcccccCchHHHHHHHHHHhhCCCee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLP-VPPELVEKGANDAASDLIQFARDKHITI 80 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~-ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (416)
+++|+||++||||||||||||++|+||++|||+|||||+||||||+|+|++ ||+|++|++.++.|++|+++|+++|++|
T Consensus 128 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TFl~A~G~~~IG~SL~E~d~~~~a~~ll~kak~~g~~i 207 (416)
T 1fw8_A 128 LENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEV 207 (416)
T ss_dssp HHSCCSSEEEEEECSCSTTTHHHHHHHHTTCSEEEEEGGGHHHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCeEEEEcCcchhhHHHHHHHHHHhhCeeEeChHHHHHHHHHcCCCccCccccChhhHHHHHHHHHHHHhcCCEE
Confidence 579999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceee-ecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHH
Q 014919 81 LYPKDFWCTKIH-HPNQVEI-FPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (416)
Q Consensus 81 ~lP~D~~v~~~~-~~~~~~~-~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (416)
+||+|++|++++ .+.+..+ ++.++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||.+++++++
T Consensus 208 ~lPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDIGp~T~~~~~~~i~~akTIvWNGPmGVFE~~~Fa~GT~~va~aia 287 (416)
T 1fw8_A 208 VLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVV 287 (416)
T ss_dssp ECCSEEEEESSSSTTCCEEEEETTTCCCTTCEEEEECHHHHHHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHH
T ss_pred ECCceEEEeeccCCCCCeEEecchhcCCCCCEEEecCHHHHHHHHHHHhhCCEEEEECCCccccCchHHHHHHHHHHHHH
Confidence 999999999987 4455556 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccccC
Q 014919 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRAF 216 (416)
Q Consensus 159 ~~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~~~ 216 (416)
++++.+ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+..
T Consensus 288 ~~~~~~-a~sIvGGGDt~aav~~~G~~d~~shiST--GGGA~LE~LEGk~LPgV~aL~~~~ 345 (416)
T 1fw8_A 288 KSSAAG-NTVIIGGGDTATVAKKYGVTDKISHVST--GGGASLELLEGKELPGVAFLSEKK 345 (416)
T ss_dssp HHHHTT-CEEEECTTHHHHHHHHTTCGGGSSEECS--CSHHHHHHHTTCCCHHHHTSCSSC
T ss_pred hhccCC-CEEEEcCcHHHHHHHHcCCCCCcceecc--ccceehHhhcCCCChHHHHHHhcc
Confidence 976444 489999886 4467899899999999 899999999999999999997653
No 5
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=100.00 E-value=1.8e-65 Score=504.53 Aligned_cols=208 Identities=26% Similarity=0.460 Sum_probs=194.9
Q ss_pred CCCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCee
Q 014919 1 MAKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITI 80 (416)
Q Consensus 1 ~~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (416)
.+++|+||++||+|||||||||++|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|
T Consensus 178 ~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~ll~~a~~~g~~i 257 (390)
T 1v6s_A 178 LLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRV 257 (390)
T ss_dssp TTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGHHHHHHHHHHHHHHTCEE
T ss_pred HhcCCCCCeEEEEcCCchhhHHHHHHHHHHHhccceeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHcCCEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeeecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHh
Q 014919 81 LYPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCK 159 (416)
Q Consensus 81 ~lP~D~~v~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~ 159 (416)
+||+|++|++++ .+.+..++++++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||+++++++++
T Consensus 258 ~lPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~ 337 (390)
T 1v6s_A 258 YLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAA 337 (390)
T ss_dssp ECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSCTTSTTTTHHHHHHHHHHHT
T ss_pred ECCcChhhhhccCCCCceEEeehhcCCCCCEeeecCHHHHHHHHHHHhhCCEEEEeCCcccccCchHHHHHHHHHHHHHh
Confidence 999999999987 4556667788999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCccccc
Q 014919 160 VSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALD 213 (416)
Q Consensus 160 ~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~ 213 (416)
++ + .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.
T Consensus 338 ~~--~-~~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~ 389 (390)
T 1v6s_A 338 LE--G-AFTVVGGGDSVAAVNRLGLKERFGHVST--GGGASLEFLEKGTLPGLEVLE 389 (390)
T ss_dssp CS--S-CEEEEESHHHHHHHHTTTCGGGSSEECC--SSSHHHHHHHHSCCHHHHTTC
T ss_pred cC--C-CEEEECChHHHHHHHHcCCccCceEEeC--ChHHHHHHHcCCCcchHHHhc
Confidence 52 2 389999886 3456788889999999 899999999999999999885
No 6
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=100.00 E-value=1.1e-65 Score=509.76 Aligned_cols=210 Identities=26% Similarity=0.468 Sum_probs=196.1
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCC-CCCcccccCchHHHHHHHHHHhhCCCee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLP-VPPELVEKGANDAASDLIQFARDKHITI 80 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~-ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (416)
+++|+||++||||||||||||++|+||+++||+|||||+||||||+|+|++ ||+|++|++.++.|++|+++|+++|++|
T Consensus 198 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TFl~A~G~~~iG~Sl~E~d~~~~a~~ll~ka~~~g~~i 277 (415)
T 1qpg_A 198 LENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEV 277 (415)
T ss_dssp HSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCEEEeChHHHHHHHHHcCCCcccchhcChhhHHHHHHHHHHHHHcCCEE
Confidence 589999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceee-ecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHH
Q 014919 81 LYPKDFWCTKIH-HPNQVEI-FPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (416)
Q Consensus 81 ~lP~D~~v~~~~-~~~~~~~-~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (416)
+||+|++|++++ .+.+..+ ++.++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++
T Consensus 278 ~lPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia 357 (415)
T 1qpg_A 278 VLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVV 357 (415)
T ss_dssp ECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHH
T ss_pred ECCcchhhhhccCCCCCeEEecchhcCCCCCeeeccCHHHHHHHHHHHhhCCEEEEeCCccccccchHHHHHHHHHHHHH
Confidence 999999999986 3445555 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccc
Q 014919 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (416)
Q Consensus 159 ~~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~ 214 (416)
++++.+ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 358 ~~t~~~-a~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LEGk~LPgv~aL~~ 413 (415)
T 1qpg_A 358 KSSAAG-NTVIIGGGDTATVAKKYGVTDKISHVST--GGGASLELLEGKELPGVAFLSE 413 (415)
T ss_dssp HHHHHT-CEEEECCHHHHHHHHHTTCGGGSSEECC--CTHHHHHHHTSCCCHHHHTSCB
T ss_pred hhccCC-CEEEECCcHHHHHHHHcCCCCCceEEeC--ChHHHHHHHcCCCCchHHHhhc
Confidence 975434 489999986 4467899899999999 8999999999999999999864
No 7
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=100.00 E-value=1.3e-65 Score=506.65 Aligned_cols=208 Identities=27% Similarity=0.486 Sum_probs=195.3
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (416)
+++|+||++||+|||||||||++|+||+++||+|||||+||||||+|+|++||+|++|++.++.|++|+++|+++|++|+
T Consensus 189 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~e~d~~~~a~~ll~~a~~~g~~i~ 268 (403)
T 3q3v_A 189 IKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIY 268 (403)
T ss_dssp TTCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECSTTHHHHHHHTTCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEE
T ss_pred HcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEECcHHHHHHHHHcCCCcCccccchhhHHHHHHHHHHHHHcCCEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeeecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHhh
Q 014919 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (416)
Q Consensus 82 lP~D~~v~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (416)
||+|++|++++ .+.+..++++++||+|||++||||+|++.|++++..|+||+||||||+||+++|+.||++++++++++
T Consensus 269 LPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDIGp~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~ 348 (403)
T 3q3v_A 269 LPVDVVAAPACSQDVPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEG 348 (403)
T ss_dssp CCSEEEEESSSSTTSCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHS
T ss_pred CCceEEEeeccCCCCceEEEecccCCCCCEeeecChHHHHHHHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHHhc
Confidence 99999999987 45566677889999999999999999999999999999999999999999999999999999999885
Q ss_pred hcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCccccccc
Q 014919 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRA 215 (416)
Q Consensus 161 ~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~~ 215 (416)
. .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+.
T Consensus 349 ~----a~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~~ 400 (403)
T 3q3v_A 349 H----ATSVVGGGDTADVVARAGDADEMTFIST--GGGASLELIEGKELPGVKALRSK 400 (403)
T ss_dssp S----SEEEEESHHHHHHHHHTTCGGGSSEECC--CHHHHHHHHTTCCCHHHHTTBC-
T ss_pred C----CEEEECCcHHHHHHHHcCCcCCccEEcC--ChHHHHHHHcCCCCcHHHHHhhh
Confidence 2 489999886 4457889899999999 89999999999999999999753
No 8
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=100.00 E-value=1.8e-65 Score=505.14 Aligned_cols=208 Identities=26% Similarity=0.487 Sum_probs=195.2
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (416)
+++|+||++||+|||||||||++|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|+
T Consensus 182 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~SL~E~d~~~~a~~ll~~a~~~g~~i~ 261 (394)
T 1php_A 182 LSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFY 261 (394)
T ss_dssp HHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHHHHTTCCCTTSCCCGGGHHHHHHHHHHHHHHTCEEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeeeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHhcCCEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeeecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHhh
Q 014919 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (416)
Q Consensus 82 lP~D~~v~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (416)
||+|++|++++ .+.+..++++++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++++
T Consensus 262 lPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~ 341 (394)
T 1php_A 262 MPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAEA 341 (394)
T ss_dssp CCSEEEEESSSSTTSCEEEEEGGGCCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHC
T ss_pred CCcchhhhhccCCCCceEEeehhcCCCCCEeeecCHHHHHHHHHHHhhCCEEEEeCCcccccCchHHHHHHHHHHHHHhc
Confidence 99999999987 45666677889999999999999999999999999999999999999999999999999999999985
Q ss_pred hcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccc
Q 014919 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (416)
Q Consensus 161 ~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~ 214 (416)
.+ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 342 --~~-~~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 393 (394)
T 1php_A 342 --LD-TYSVIGGGDSAAAVEKFGLADKMDHIST--GGGASLEFMEGKQLPGVVALED 393 (394)
T ss_dssp --TT-CEEEECSHHHHHHHHHTTCGGGSSEECS--CTHHHHHHHTTCCCHHHHTSCB
T ss_pred --CC-CEEEECChHHHHHHHHcCCCCCccEEeC--ChHHHHHHHcCCCcchHHHhhc
Confidence 12 389999986 4457889899999999 8999999999999999999864
No 9
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=100.00 E-value=1.7e-65 Score=504.74 Aligned_cols=208 Identities=24% Similarity=0.355 Sum_probs=195.4
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (416)
+++|+||++||+|||||||||++|+||+++||+|||||+||||||+|+|++||+|++|++.++.|++|+++|+++|++|+
T Consensus 181 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~il~~a~~~g~~i~ 260 (395)
T 4fey_A 181 LKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIP 260 (395)
T ss_dssp HTSCCSSEEEEEEESCHHHHHHHHHHHTTTCSEEEEEEHHHHHHHHHTTCCCTTCCCCGGGHHHHHHHHHHHHHTTCBCC
T ss_pred hcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEEChHHHHHHHHHcCCccCccccchhhHHHHHHHHHHHHHcCCEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeeecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHhh
Q 014919 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (416)
Q Consensus 82 lP~D~~v~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (416)
||+|++|++++ ++.+..++++++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++++
T Consensus 261 LPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~ 340 (395)
T 4fey_A 261 VPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQS 340 (395)
T ss_dssp CCSEEEEESSSSTTCCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHHHCSEEEEECCSSCTTSGGGCHHHHHHHHHHHHH
T ss_pred ccceEEEeccccCCCceEEEEcccCCCCCcceecChHHHHHHHHHHHhCCEEEEECCCCccccchhhHHHHHHHHHHHhc
Confidence 99999999987 45566677889999999999999999999999999999999999999999999999999999999884
Q ss_pred hcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCccccccc
Q 014919 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRA 215 (416)
Q Consensus 161 ~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~~ 215 (416)
+ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+.
T Consensus 341 ---~-a~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~~ 392 (395)
T 4fey_A 341 ---H-AFSVAGGGDTIAAIEKFGIKDQVSYIST--AGGAFLEFLEGKKLPAIEILKEK 392 (395)
T ss_dssp ---C-SEEEEESHHHHHHHHHTTCSTTSSEEEC--CSHHHHHHHTTCCCHHHHHHHHT
T ss_pred ---C-CeEEECCcHHHHHHHHcCCcCCceEEcC--ChHHHHHHHcCCCchHHHHHHhh
Confidence 2 589999886 4457899999999999 89999999999999999998653
No 10
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=100.00 E-value=1.4e-65 Score=509.09 Aligned_cols=210 Identities=26% Similarity=0.487 Sum_probs=196.4
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCC-CCCcccccCchHHHHHHHHHHhhCCCee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLP-VPPELVEKGANDAASDLIQFARDKHITI 80 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~-ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (416)
+++|+||++||+|||||||||++|+||+++||+|||||+||||||+|+|++ ||+|++|++.++.|++|+++|+++|++|
T Consensus 200 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TFl~A~G~~~iG~Sl~E~d~~~~a~~ll~ka~~~g~~i 279 (416)
T 2wzb_A 200 LESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKI 279 (416)
T ss_dssp HHSCCSSEEEEECSSCHHHHGGGHHHHTTTCSEEEECGGGHHHHHHHHHCCCCTTSCCCHHHHTTHHHHHHHHHHTTCEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeeeChHHHHHHHHHcCCCcccchhcChhhHHHHHHHHHHHHHcCCEE
Confidence 579999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceee-ecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHH
Q 014919 81 LYPKDFWCTKIH-HPNQVEI-FPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (416)
Q Consensus 81 ~lP~D~~v~~~~-~~~~~~~-~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (416)
+||+|++|++++ .+.+..+ ++.++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++
T Consensus 280 ~lPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia 359 (416)
T 2wzb_A 280 TLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVV 359 (416)
T ss_dssp ECCCEEEEESSSSTTCCEEEEETTTCCCTTCEEEEECHHHHHHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHH
T ss_pred ECCcchhhhhccCCCCCeEEecchhcCCCCCeeeecCHHHHHHHHHHHhhCCEEEEECCCcccccchHHHHHHHHHHHHH
Confidence 999999999987 4455556 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccc
Q 014919 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (416)
Q Consensus 159 ~~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~ 214 (416)
++++.+ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 360 ~~t~~~-a~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LEGk~LPgv~aL~~ 415 (416)
T 2wzb_A 360 KATSRG-CITIIGGGDTATCCAKWNTEDKVSHVST--GGGASLELLEGKVLPGVDALSN 415 (416)
T ss_dssp HHHHTT-CEEEEESTTHHHHHHHTTCTTSSSEEES--CSHHHHHHHHTCCCHHHHTSCB
T ss_pred hhccCC-CEEEEcCcHHHHHHHHcCCCCCceEEeC--chHHHHHHHcCCCccHHHHHhc
Confidence 976444 489999876 4567899999999999 8999999999999999998864
No 11
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-63 Score=490.18 Aligned_cols=202 Identities=23% Similarity=0.372 Sum_probs=188.8
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (416)
+++|+||++||+|||||||||++|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++ ++|+
T Consensus 178 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~ll~~-----~~i~ 252 (387)
T 1zmr_A 178 LKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVDEAKRLLTT-----CNIP 252 (387)
T ss_dssp HSSCSSSEEEEEEESCTTTTHHHHHHHHTTCSEEEEEEHHHHHHHHHTTCCCTTCSCCGGGHHHHHHHHTT-----SCCC
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCEEEeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHh-----CCcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999976 8999
Q ss_pred cceeEEEecCC-CCCceeeecCCCCCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCCchHHHHHHHHHhh
Q 014919 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (416)
Q Consensus 82 lP~D~~v~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (416)
||+|++|++++ .+.+..++++++||+|||++||||+|++.|++++..|+||+|||||||||+++|+.||++++++++++
T Consensus 253 lPvD~vva~~f~~~~~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~ 332 (387)
T 1zmr_A 253 VPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADS 332 (387)
T ss_dssp CCSEEEEESSSSSSCCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHHHCSEEEEESCSBCTTSGGGCHHHHHHHHHHHHS
T ss_pred CCccceeeeccCCCCceEEeehhhCCCCCEEeecCHHHHHHHHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHhc
Confidence 99999999886 44566677889999999999999999999999999999999999999999999999999999999985
Q ss_pred hcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCcccccc
Q 014919 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (416)
Q Consensus 161 ~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~ 214 (416)
+ .+||+|||+ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 333 ---~-~~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 383 (387)
T 1zmr_A 333 ---E-AFSIAGGGDTLAAIDLFGIADKISYIST--GGGAFLEFVEGKVLPAVAMLEE 383 (387)
T ss_dssp ---S-SEEEECSHHHHHHHHHHTCGGGSSEECC--CTHHHHHHHTTCCCHHHHHHHH
T ss_pred ---C-CeEEECCHHHHHHHHHcCCccCceEEeC--ChHHHHHHHcCCCCchHHHHHh
Confidence 2 389999986 4457889899999999 8999999999999999999865
No 12
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-61 Score=478.65 Aligned_cols=200 Identities=18% Similarity=0.257 Sum_probs=186.6
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHh--cCeEEEehHHHHHHHHHcCCCCCCc---cccc----CchHHHHHHHHH
Q 014919 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASR--CDGLIFVGLMSFQIMHALGLPVPPE---LVEK----GANDAASDLIQF 72 (416)
Q Consensus 2 ~~~~~~p~~~i~GGaKv~dki~~~~~l~~~--~d~~~~gG~~a~~fl~a~g~~ig~s---~~e~----~~~~~a~~~~~~ 72 (416)
+++|+||++||+|||||||||++|+||+++ ||+|||||+||||||+|+|++||+| ++|+ +.++.|++|+++
T Consensus 185 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~k~~vD~liiGGgma~tFl~A~G~~iG~S~~~l~E~~g~~d~~~~a~~ll~k 264 (410)
T 2cun_A 185 YYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLGRKNVEFMKKKGLLDYVKHAEEILDE 264 (410)
T ss_dssp HTCCCSCEEEEECSSCHHHHHHHHHHHHHTTSCSEEEECHHHHHHHHHHHTCCCCHHHHHHHHTTTGGGGHHHHHHHHHH
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHhcccCCCEEEEChHHHHHHHHHcCCCcCcchhhhhhcccchhhHHHHHHHHHh
Confidence 589999999999999999999999999999 9999999999999999999999999 9999 999999999999
Q ss_pred HhhCCCeeecceeEEEecCCCCCceeeecCCC-----CCCCCCccccChhhHHHHHHHhccCCeEEEeccceEEEeCCCC
Q 014919 73 ARDKHITILYPKDFWCTKIHHPNQVEIFPSHG-----IPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYS 147 (416)
Q Consensus 73 ~~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~-----i~~~~~~~DiGp~T~~~~~~~~~~a~~i~wnGp~G~~e~~~f~ 147 (416)
+ |++|+||+|++|+++ .+..++++++ || |||++||||+|++.|++++..|+||+|||||||||+++|+
T Consensus 265 a---g~~i~lPvD~vva~~---a~~~~~~~~~~~~~~ip-~~m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa 337 (410)
T 2cun_A 265 F---YPYIRTPVDFAVDYK---GERVEIDLLSENRGLLH-QYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFA 337 (410)
T ss_dssp H---GGGEECCSEEEEEET---TEEEEEESSSGGGGGGG-TSCEEEECHHHHHHHHHHHHTCSEEEEESCSSCTTSGGGC
T ss_pred c---cCeEeCCceeEEecC---CCeEEEecccccccCCC-CCeeeeeCHHHHHHHHHHHhhCCEEEEECCcccccCchHH
Confidence 9 899999999999987 3455677887 99 9999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEcchh---HHHHhcccCCccceeeecCCceEeeeecccCCCCccccccc
Q 014919 148 NGASKLTGMLCKVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRA 215 (416)
Q Consensus 148 ~GT~~l~~~~a~~~~~~~~~~v~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~gr~lPg~~aL~~~ 215 (416)
.||++++++++++ + .+||+|||+ ++..+|+ ++++|+|| ||||+||||+|+.+|++++|.+.
T Consensus 338 ~GT~~va~aia~~---~-~~sivGGGDt~aav~~~g~-d~~shiST--GGGA~Le~LeGk~LPgv~aL~~~ 401 (410)
T 2cun_A 338 IGTVEVFKAIADS---P-AFSVLGGGHSIASIQKYGI-TGITHIST--GGGAMLSFFAGEELPVLRALQIS 401 (410)
T ss_dssp HHHHHHHHHHHHS---S-SEEEEECGGGGGGGGGSCC-CCCSEECS--CSHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc---C-CeEEECChHHHHHHHHhCC-CCcEEEcC--ChHHHHHHHcCCCCcHHHHHHHH
Confidence 9999999999985 2 389999886 4457888 89999999 89999999999999999999754
No 13
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.98 E-value=7e-32 Score=252.03 Aligned_cols=183 Identities=22% Similarity=0.358 Sum_probs=158.0
Q ss_pred ccccccccCCCCCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhc
Q 014919 219 DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVA 294 (416)
Q Consensus 219 ~~~~~~~f~~~~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~ 294 (416)
+.+|.+.|++ ++++|||||||+|.++..+|+.+|+.+|+|||++. .|+++++..+++|++|+++|+.++++..+
T Consensus 24 ~~d~~~~f~~-~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~- 101 (218)
T 3dxy_A 24 MLDFPALFGR-EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI- 101 (218)
T ss_dssp CCCHHHHHSS-CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS-
T ss_pred CCCHHHHcCC-CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc-
Confidence 4578888987 58999999999999999999999999999999754 45556666789999999999999766545
Q ss_pred cCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceeeecccccc
Q 014919 295 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDT 374 (416)
Q Consensus 295 ~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 374 (416)
+++++|.|+++||+||++.+|+++|++++.++++++++|||||.|++.||+..|++++.+.+.+...+. .+.
T Consensus 102 -~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~-~~~------ 173 (218)
T 3dxy_A 102 -PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK-NLS------ 173 (218)
T ss_dssp -CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE-ECC------
T ss_pred -CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc-ccc------
Confidence 588999999999999999999999999999999999999999999999999999999999998765332 221
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCC
Q 014919 375 KTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPS 413 (416)
Q Consensus 375 ~~~~~~~~~~~~~~~~T~~E~k~~~~G~~i~~~~~~k~~ 413 (416)
...+|...+..++.|+||+|+.++|+.||+++|+|++
T Consensus 174 --~~~~~~~~~~~~~~t~fE~k~~~~G~~~~~~~~~~~~ 210 (218)
T 3dxy_A 174 --ESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK 210 (218)
T ss_dssp --TTSSCBCCCTTSCCCTTCCTTCTTCCSCEEEEEEECC
T ss_pred --CcCccCCCCCCCCCcHHHHHHHHCCCCeEEEEEEEcc
Confidence 1124555666789999999999999999999999975
No 14
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.97 E-value=1.7e-31 Score=248.12 Aligned_cols=181 Identities=19% Similarity=0.405 Sum_probs=155.5
Q ss_pred ccccccccCCCCCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhc
Q 014919 219 DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVA 294 (416)
Q Consensus 219 ~~~~~~~f~~~~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~ 294 (416)
..+|.+.|++ ++++|||||||+|.++..||+.+|+.+++|+|++.. |.++++..+++|++++++|+.++ +..+
T Consensus 28 ~~~~~~~f~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l-~~~~- 104 (213)
T 2fca_A 28 KGKWNTVFGN-DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL-TDVF- 104 (213)
T ss_dssp TTCHHHHHTS-CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH-HHHC-
T ss_pred CCCHHHHcCC-CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH-Hhhc-
Confidence 4578888876 579999999999999999999999999999997554 44555566889999999999986 4444
Q ss_pred cCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceeeecccccc
Q 014919 295 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDT 374 (416)
Q Consensus 295 ~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 374 (416)
+++++|.|+++||+||++.+|+++|++++.++++++++|||||.|++.||+..+++++.+.+.++++.......|
T Consensus 105 -~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~~~d---- 179 (213)
T 2fca_A 105 -EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYVSLD---- 179 (213)
T ss_dssp -CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESS----
T ss_pred -CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccccccc----
Confidence 578999999999999999999999999999999999999999999999999999999999999988765444434
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeC
Q 014919 375 KTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKP 412 (416)
Q Consensus 375 ~~~~~~~~~~~~~~~~T~~E~k~~~~G~~i~~~~~~k~ 412 (416)
++. ..++..++|+||+++.++|++||++.|+|+
T Consensus 180 -~~~----~~~~~~~~t~~E~~~~~~G~~i~~~~~~~~ 212 (213)
T 2fca_A 180 -LHN----SNLEGNIMTEYEEKFSALGQPIYRAEVEWR 212 (213)
T ss_dssp -GGG----SSCTTCCCCTTGGGSSSSSCCCEEEEEECC
T ss_pred -ccc----ccCCCCCCcHHHHHHHHCCCCeEEEEEEEC
Confidence 222 134668899999999999999999999986
No 15
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=239.13 Aligned_cols=176 Identities=23% Similarity=0.352 Sum_probs=135.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HH------hCCCcEEEEEcChhhhhhhhhccCCCc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QL------SGITNGYFIATNATSTFRSIVASYPGK 299 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~------~~l~nv~f~~~Da~~l~~~~~~~~~~s 299 (416)
..++|||||||+|.++..||+.+|+.+++|||++..+++.+ +. .++.|++++++|+...++..| ++++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~--~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF--YKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC--CTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC--CCcC
Confidence 46799999999999999999999999999999765544433 22 357899999999987445545 5789
Q ss_pred eeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceeeeccccccccCCC
Q 014919 300 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQG 379 (416)
Q Consensus 300 ~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 379 (416)
+|.|+++|||||++.+|+|||++++.++++++++|||||.|++.||+..|.++|.+.+.+++.+. ....+ .+.+
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~-~~~~~-----~~~~ 197 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFE-RVPLE-----DLSE 197 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE-EECGG-----GGTT
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc-ccCch-----hccc
Confidence 99999999999999999999999999999999999999999999999999999999999988543 23222 1223
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCCC
Q 014919 380 GWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPSC 414 (416)
Q Consensus 380 ~~~~~~~~~~~T~~E~k~~~~G~~i~~~~~~k~~~ 414 (416)
.|. .+...+.|+||+|+.++|+++|+++|+|+..
T Consensus 198 ~~~-~~~~~~~t~~e~k~~~~G~~~~~~~f~r~~~ 231 (235)
T 3ckk_A 198 DPV-VGHLGTSTEEGKKVLRNGGKNFPAIFRRIQD 231 (235)
T ss_dssp CTT-GGGTTTSSHHHHHHHHTTCCCEEEEEEECCC
T ss_pred Ccc-ccCCCCCCHHHHHHHHCCCCeEEEEEEECCC
Confidence 342 2345678999999999999999999999864
No 16
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.96 E-value=8.2e-29 Score=229.22 Aligned_cols=180 Identities=18% Similarity=0.397 Sum_probs=153.4
Q ss_pred ccccccccCCCCCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhc
Q 014919 219 DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVA 294 (416)
Q Consensus 219 ~~~~~~~f~~~~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~ 294 (416)
...|.+.|+. .+++|||||||+|.++..+|+.+|+.+++|+|++.. |.+++...+++|++++++|+.++ ++.+
T Consensus 31 ~~~~~~~f~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~- 107 (214)
T 1yzh_A 31 KAKWRDLFGN-DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL-TDYF- 107 (214)
T ss_dssp TTTHHHHHTS-CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG-GGTS-
T ss_pred ccCHHHHcCC-CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH-Hhhc-
Confidence 3468778875 578999999999999999999999999999997544 44555567888999999999885 3333
Q ss_pred cCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceeeecccccc
Q 014919 295 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDT 374 (416)
Q Consensus 295 ~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 374 (416)
+++++|.|+++||+||++.+|+++|+.++.+++++.++|+|||.+++.||+..+++++.+.+.++++.......|
T Consensus 108 -~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~d---- 182 (214)
T 1yzh_A 108 -EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVWLD---- 182 (214)
T ss_dssp -CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESS----
T ss_pred -CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecccc----
Confidence 477899999999999999999999999999999999999999999999999999999999999999876555444
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEe
Q 014919 375 KTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSK 411 (416)
Q Consensus 375 ~~~~~~~~~~~~~~~~T~~E~k~~~~G~~i~~~~~~k 411 (416)
++. ...+..+.|+||+++.++|++||+++|++
T Consensus 183 -~~~----~~~~~~~~t~~e~~~~~~g~~i~~~~~~~ 214 (214)
T 1yzh_A 183 -LHA----SDFEGNVMTEYEQKFSNKGQVIYRVEAEF 214 (214)
T ss_dssp -GGG----SCCCCCCCCHHHHHTGGGCCCCEEEEEEC
T ss_pred -ccc----cCCCCCCCcHHHHHHHHCCCCeEEEEEEC
Confidence 222 13466889999999999999999999974
No 17
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.95 E-value=3e-27 Score=223.80 Aligned_cols=187 Identities=17% Similarity=0.267 Sum_probs=145.0
Q ss_pred cccccccCC---------CCCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHh--------CCCcE
Q 014919 220 IDWSAAYHD---------PAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLS--------GITNG 278 (416)
Q Consensus 220 ~~~~~~f~~---------~~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~--------~l~nv 278 (416)
.+|.+.|++ ..+.+|||||||+|.+++.+|+.+|+.+++|+|++..+++ +++.. +++|+
T Consensus 30 ~~w~~~f~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv 109 (246)
T 2vdv_E 30 MDWSKLYPYYKNAENGQMTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNI 109 (246)
T ss_dssp CCGGGTCGGGBC----CBSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTE
T ss_pred CCHHHHhCcccccccccCCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcE
Confidence 478888875 2468999999999999999999999999999997655444 33333 77899
Q ss_pred EEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHH
Q 014919 279 YFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFL 358 (416)
Q Consensus 279 ~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~ 358 (416)
+++++|+.+.++..+ .++++|.|+++|||||++.+|+++|++++.+++++.++|+|||.|++.||+..|.+++.+.+.
T Consensus 110 ~~~~~D~~~~l~~~~--~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 187 (246)
T 2vdv_E 110 NVLRGNAMKFLPNFF--EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLE 187 (246)
T ss_dssp EEEECCTTSCGGGTS--CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHhc--cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHH
Confidence 999999987545445 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCceeeeccccccccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCCCC
Q 014919 359 EYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPSCV 415 (416)
Q Consensus 359 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~T~~E~k~~~~G~~i~~~~~~k~~~~ 415 (416)
+++++ .....+ .+..+| +.....+.|+||+++.++|.++|+++|+|++..
T Consensus 188 ~~~~~-~~~~~~-----~~~~d~-~~~~~~~~t~~e~k~~~~g~~~~~~~~~k~~~~ 237 (246)
T 2vdv_E 188 EHPLF-ERLSKE-----WEENDE-CVKIMRNATEEGKKVERKKGDKFVACFTRLPTP 237 (246)
T ss_dssp HSTTE-EECCHH-----HHHTCH-HHHHHHHSSHHHHHHHHTTCCCEEEEEEECCCC
T ss_pred hCcCe-EecCcc-----ccccCc-ccccCCCCCHHHHHHHHCCCCeEEEEEEECCCc
Confidence 98863 222211 111111 001123569999999999999999999998653
No 18
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.60 E-value=8.4e-16 Score=143.61 Aligned_cols=113 Identities=17% Similarity=0.212 Sum_probs=86.8
Q ss_pred cccccCCCCCCeEEEEeccccHHHHHHHHhCCCCeEEEEchH-H-------HHHHHHHHhCCCcEEEEEcChhhhhhhhh
Q 014919 222 WSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV-T-------HCRDSLQLSGITNGYFIATNATSTFRSIV 293 (416)
Q Consensus 222 ~~~~f~~~~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~-~-------~a~~~a~~~~l~nv~f~~~Da~~l~~~~~ 293 (416)
|.+.+.. .+.+|||||||+|.++..||++.|+.+++|||++ . .|.+++.+.+++|++|+++|+.++ +..+
T Consensus 17 ~~~~~~~-~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~ 94 (225)
T 3p2e_A 17 LTEIIGQ-FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFEL 94 (225)
T ss_dssp HHHHHTT-CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGG
T ss_pred HHHHhCC-CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhc
Confidence 3344444 4689999999999999999999999999999986 2 224444456788999999999987 3322
Q ss_pred ccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 294 ASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 294 ~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
.+.+|.++++||.|+ . +...+...+.++++++|+|||||++++
T Consensus 95 ---~d~v~~i~~~~~~~~--~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 ---KNIADSISILFPWGT--L-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ---TTCEEEEEEESCCHH--H-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred ---cCeEEEEEEeCCCcH--H-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 378999999976443 2 333344457899999999999999998
No 19
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.52 E-value=1.5e-14 Score=138.15 Aligned_cols=125 Identities=15% Similarity=0.164 Sum_probs=90.5
Q ss_pred cccCCCCcccccccCccccccccccCCCCCCeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHH----HHhCC
Q 014919 202 KGRMLPGVSALDRAFPFDIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSL----QLSGI 275 (416)
Q Consensus 202 ~gr~lPg~~aL~~~~p~~~~~~~~f~~~~~~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a----~~~~l 275 (416)
-.|+.|+++.+.+.. ..+.+.+.. .+.+|||||||+|.++..||++. |+++++|||+++.+++.+ ...+.
T Consensus 46 i~rsvP~Y~~~~~~i---~~l~~~~~~-~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~ 121 (261)
T 4gek_A 46 IQRSVPGYSNIISMI---GMLAERFVQ-PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA 121 (261)
T ss_dssp HHHHSTTHHHHHHHH---HHHHHHHCC-TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC
T ss_pred HhhcCCCHHHHHHHH---HHHHHHhCC-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc
Confidence 346778876554332 234444544 47899999999999999999974 678999999766555444 33444
Q ss_pred -CcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 276 -TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 276 -~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.||+|+++|+.++ | .+++|.|++++...|..... ...+|++++++|||||.|++.
T Consensus 122 ~~~v~~~~~D~~~~-----~--~~~~d~v~~~~~l~~~~~~~------~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 122 PTPVDVIEGDIRDI-----A--IENASMVVLNFTLQFLEPSE------RQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp SSCEEEEESCTTTC-----C--CCSEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEeecccccc-----c--ccccccceeeeeeeecCchh------HhHHHHHHHHHcCCCcEEEEE
Confidence 4799999999876 3 45699999887654432111 137899999999999999885
No 20
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.49 E-value=2e-13 Score=130.77 Aligned_cols=155 Identities=12% Similarity=0.012 Sum_probs=112.0
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHHHH----HHHh-CCCcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCRDS----LQLS-GITNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~~~----a~~~-~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+++. .|..+++|+|++..+++. ++.. +.+|++++++|+.+. + ++++||.|
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~----~--~~~~fD~V 183 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF----I--SDQMYDAV 183 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC----C--CSCCEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc----C--cCCCccEE
Confidence 4679999999999999999998 788999999976555444 4444 778999999998763 2 36789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceeeeccccccccCCCCCCC
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLG 383 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 383 (416)
+++.|+|| .+++++.++|||||.+++.+......+.+.+.+++.+|........ -...|..
T Consensus 184 i~~~~~~~-------------~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~~------~~~~~~~ 244 (275)
T 1yb2_A 184 IADIPDPW-------------NHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVEL------MKRRILV 244 (275)
T ss_dssp EECCSCGG-------------GSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEEE------EECCCCC
T ss_pred EEcCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEEE------ecceeEe
Confidence 99877664 6899999999999999999888767777778888888754433211 1122321
Q ss_pred CCCCCCCCHHHHHHHHCCCCeEEEEEEeCCC
Q 014919 384 ENSFGVRSDWEQHVIDRGAPMYRLMLSKPSC 414 (416)
Q Consensus 384 ~~~~~~~T~~E~k~~~~G~~i~~~~~~k~~~ 414 (416)
... ...... ...|++.|-+..+|.+.
T Consensus 245 ~~~-~~rp~~----~~~~~~~~li~ark~~~ 270 (275)
T 1yb2_A 245 REG-ATRPAS----DDLTHTAFITFAIKKSG 270 (275)
T ss_dssp CTT-CCCCGG----GGSCEEEEEEEEEECCS
T ss_pred cCC-cccccc----ccCCCcEEEEEEEehhc
Confidence 111 111111 14577888888888765
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.48 E-value=8.4e-13 Score=120.22 Aligned_cols=117 Identities=16% Similarity=0.154 Sum_probs=95.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+|+..|..+++|+|++.. |.++++..+++|++++++|+.+.+. ..+++|.|++
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~D~i~~ 114 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-----DLPDPDRVFI 114 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-----TSCCCSEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-----cCCCCCEEEE
Confidence 468999999999999999999999999999997554 4445555678899999999976522 2367999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCC
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~ 362 (416)
..+.+ ....+++++.++|+|||.+++.+......+.+.+.+++.++
T Consensus 115 ~~~~~-----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 115 GGSGG-----------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp SCCTT-----------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred CCCCc-----------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 75432 12489999999999999999988777778888889999987
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=2.8e-13 Score=127.34 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=82.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC-CCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG-ITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~-l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+.+|||||||+|.++..+++..+. +++|+|++..+++.+++.. ..++.++++|+.++ ++++++||.|++...
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~~~ 117 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDI-----AIEPDAYNVVLSSLA 117 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGC-----CCCTTCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhC-----CCCCCCeEEEEEchh
Confidence 4689999999999999999998654 9999999888777766543 46899999999876 435789999999864
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
-.+... ...++++++++|||||.+++.+.
T Consensus 118 l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 118 LHYIAS--------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp GGGCSC--------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhhh--------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 433311 14899999999999999999753
No 23
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.46 E-value=3.9e-13 Score=126.42 Aligned_cols=118 Identities=14% Similarity=0.014 Sum_probs=96.7
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHHH----HHHHh-CCCcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCRD----SLQLS-GITNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~~----~a~~~-~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+++. .|..+++|+|++..+++ +++.. +.+|+.+.++|+.+. +++++++|.|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-----~~~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-----ELEEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-----CCCTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-----CCCCCCcCEE
Confidence 4679999999999999999998 67899999997554444 44444 778999999999875 2246789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCce
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~ 365 (416)
+++.|+|| .+++++.++|+|||.+++.+........+.+.+++.+|...
T Consensus 171 ~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~ 219 (258)
T 2pwy_A 171 ALDLMEPW-------------KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLE 219 (258)
T ss_dssp EEESSCGG-------------GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEE
T ss_pred EECCcCHH-------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceE
Confidence 99887775 68999999999999999988877777778888888776543
No 24
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.45 E-value=6.4e-13 Score=125.11 Aligned_cols=117 Identities=15% Similarity=0.245 Sum_probs=97.5
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHH----HHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVT----HCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~----~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+++. .|..+++|+|++. .|.++++..+++| ++++++|+.+. + +++++|.|
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~D~v 166 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG----I--EEENVDHV 166 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC----C--CCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc----c--CCCCcCEE
Confidence 4679999999999999999999 8899999999754 4455555668777 99999999864 2 46789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCC--CCce
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYG--KGKL 365 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~--~~~~ 365 (416)
+++.|+|| .+++++.++|+|||.+++.+...+....+.+.+++++ |...
T Consensus 167 ~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 167 ILDLPQPE-------------RVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp EECSSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCC
T ss_pred EECCCCHH-------------HHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcccc
Confidence 99877775 6899999999999999998877777888888899888 6543
No 25
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.45 E-value=4e-13 Score=123.56 Aligned_cols=127 Identities=12% Similarity=0.122 Sum_probs=90.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHH----HhCCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQ----LSGITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~----~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
.+.+|||||||+|.++..+|+++|+.+++|+|++..+++ +++ ..+++|++|+++|+.++ |+.+++ |
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-----~~~~~~-d 100 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-----PPLSGV-G 100 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-----CSCCCE-E
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-----CCCCCC-C
Confidence 468899999999999999999999999999997654332 222 35677999999999886 435667 8
Q ss_pred EEEEECCCCCCCCc-chhhhhhhHHHHHHHHhhccCCcEEEEEeC-----------------cHHHH-HHHHHHHHhCCC
Q 014919 302 LVSIQCPNPDFNRP-EHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-----------------IEEVM-LRMKQQFLEYGK 362 (416)
Q Consensus 302 ~v~~~fpdpw~k~~-h~krRl~~~~~l~~i~r~LkpgG~l~l~tD-----------------~~~~~-~~~~~~~~~~~~ 362 (416)
.+++.++ |.... |+-. -...++++++++|||||.+++... ...+. +.+.+.+.+.||
T Consensus 101 ~v~~~~~--~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (218)
T 3mq2_A 101 ELHVLMP--WGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGW 176 (218)
T ss_dssp EEEEESC--CHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTE
T ss_pred EEEEEcc--chhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCC
Confidence 8887754 32110 0100 014889999999999999999631 12232 335667888888
Q ss_pred Ccee
Q 014919 363 GKLV 366 (416)
Q Consensus 363 ~~~~ 366 (416)
....
T Consensus 177 ~i~~ 180 (218)
T 3mq2_A 177 KLAD 180 (218)
T ss_dssp EEEE
T ss_pred Ccee
Confidence 6544
No 26
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.44 E-value=1.5e-12 Score=115.26 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=93.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++.+|..+++|+|++..++ +++...+++ |+ ++++|+.+.+ +..+++||.|+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~----~~~~~~~D~i~ 99 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF----DDVPDNPDVIF 99 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG----GGCCSCCSEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh----hccCCCCCEEE
Confidence 35799999999999999999999999999999755444 444455776 89 8899986542 21237899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCce
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~ 365 (416)
++++..+ ..+++++.++|+|||.+++.+...+....+.+.+++.++...
T Consensus 100 ~~~~~~~------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 100 IGGGLTA------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp ECC-TTC------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred ECCcccH------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 8865443 278999999999999999988777777777888888876543
No 27
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=5.9e-13 Score=120.77 Aligned_cols=122 Identities=15% Similarity=0.100 Sum_probs=93.4
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+.+|||||||+|.++..+++. ..+++|+|++..+++.++++ ..|++++++|+.++ ++++++||.|+++..-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~d~~~~-----~~~~~~fD~v~~~~~l~ 113 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQT-HPSVTFHHGTITDL-----SDSPKRWAGLLAWYSLI 113 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHH-CTTSEEECCCGGGG-----GGSCCCEEEEEEESSST
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh-CCCCeEEeCccccc-----ccCCCCeEEEEehhhHh
Confidence 678999999999999999988 56999999988888777655 46899999999886 33578999999986554
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH---------------HHHHHHHHHHhCCCCcee
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE---------------VMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~---------------~~~~~~~~~~~~~~~~~~ 366 (416)
+..... ...+++++.++|||||.+++.+-... -.+++.+.+++.||....
T Consensus 114 ~~~~~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 114 HMGPGE------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp TCCTTT------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEE
T ss_pred cCCHHH------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEE
Confidence 432111 24899999999999999998752211 145566777777776443
No 28
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.43 E-value=1.4e-12 Score=122.12 Aligned_cols=121 Identities=15% Similarity=0.101 Sum_probs=90.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.+++.+|+..|+.+++|+|++.. |.++++..+++|++++++|+.++... +..+++||.|++.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR--KDVRESYDIVTAR 148 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC--TTTTTCEEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc--ccccCCccEEEEe
Confidence 67999999999999999999889999999997554 44445566888999999999876210 0015789999987
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC--cHHHHHHHHHHHHhCCCCce
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD--IEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD--~~~~~~~~~~~~~~~~~~~~ 365 (416)
.... ...+++.+.++|+|||.+++... ...-...+.+.+++.++...
T Consensus 149 ~~~~------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~ 197 (240)
T 1xdz_A 149 AVAR------------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELE 197 (240)
T ss_dssp CCSC------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEE
T ss_pred ccCC------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEe
Confidence 4211 14899999999999999988632 23334456667788877543
No 29
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.42 E-value=4.2e-13 Score=125.88 Aligned_cols=129 Identities=11% Similarity=-0.078 Sum_probs=92.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh---CCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS---GITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~---~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+.+|||||||+|.++..+++..|. +++|||++..+++.+++. ...+++++.+|+.++.. ++++++||.|++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~---~~~~~~FD~i~~- 134 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP---TLPDGHFDGILY- 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG---GSCTTCEEEEEE-
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcc---cccccCCceEEE-
Confidence 4789999999999999999988764 899999866655555432 33579999999988743 235789999964
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC--------------cHHHHHHHHHHHHhCCCCce
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD--------------IEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD--------------~~~~~~~~~~~~~~~~~~~~ 365 (416)
|++....+..+....+.++++++|+|||||+|.+... ...+.+.....|.+.||...
T Consensus 135 --D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~ 205 (236)
T 3orh_A 135 --DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp --CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGG
T ss_pred --eeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEE
Confidence 6665544444444456899999999999999987421 01233334456677787643
No 30
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.42 E-value=2.6e-12 Score=117.79 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=93.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+|+. ..+++|+|++.. |.++++..+++ |++++++|+.+.++ ...+||.|+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-----~~~~~D~v~ 127 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-----DLPLPEAVF 127 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-----TSCCCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-----cCCCCCEEE
Confidence 4689999999999999999998 789999997544 44555566887 99999999988522 235799998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCcee
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~ 366 (416)
+.... ..+ +++++.++|||||++++.+...+....+.+.+++.++....
T Consensus 128 ~~~~~------------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 128 IGGGG------------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp ECSCC------------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred ECCcc------------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 76321 113 89999999999999999988877888888899988865443
No 31
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.42 E-value=2e-13 Score=130.19 Aligned_cols=97 Identities=12% Similarity=0.027 Sum_probs=81.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
...+|||||||+|.++..|++.. .+++|+|++..+++.++ ..+|+.++++|+.++ |+++++||.|++...-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~--~~~~v~~~~~~~e~~-----~~~~~sfD~v~~~~~~ 109 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQAL--RHPRVTYAVAPAEDT-----GLPPASVDVAIAAQAM 109 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCC--CCTTEEEEECCTTCC-----CCCSSCEEEEEECSCC
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhh--hcCCceeehhhhhhh-----cccCCcccEEEEeeeh
Confidence 35789999999999999999885 58999999988877653 346899999999887 5578999999998666
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.|+. .+.++++++|+|||||.|.+.+
T Consensus 110 h~~~---------~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 110 HWFD---------LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp TTCC---------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhh---------HHHHHHHHHHHcCCCCEEEEEE
Confidence 6642 2478999999999999998753
No 32
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.42 E-value=1.5e-12 Score=124.20 Aligned_cols=116 Identities=16% Similarity=0.208 Sum_probs=94.4
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHHH----HHHHh-C--CCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCRD----SLQLS-G--ITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~~----~a~~~-~--l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
.+.+|||+|||+|.++..+++. .|..+++|+|++..+++ +++.. + ..|++++++|+.+. ++++++||
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-----~~~~~~~D 173 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-----ELPDGSVD 173 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-----CCCTTCEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-----CCCCCcee
Confidence 3679999999999999999986 57889999997554444 44444 5 67899999999875 22467899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHh-CCCC
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLE-YGKG 363 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~-~~~~ 363 (416)
.|+++.++|| .+++++.++|+|||.+++.+...+....+.+.+.+ .+|.
T Consensus 174 ~v~~~~~~~~-------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 174 RAVLDMLAPW-------------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEEEESSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EEEECCcCHH-------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 9999988887 67999999999999999998887777777777776 5554
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.42 E-value=1.4e-13 Score=126.13 Aligned_cols=101 Identities=10% Similarity=0.042 Sum_probs=76.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-C---------------CCcEEEEEcChhhhhhhhh
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-G---------------ITNGYFIATNATSTFRSIV 293 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-~---------------l~nv~f~~~Da~~l~~~~~ 293 (416)
.+.+|||+|||+|..+..||++ ..+++|+|+++.+++.+++. + ..|++|+++|+.++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l----- 94 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL----- 94 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS-----
T ss_pred CCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC-----
Confidence 4689999999999999999998 57999999988887776543 2 35899999999887
Q ss_pred ccCC-CceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 294 ASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 294 ~~~~-~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++.+ ++||.|+..+.-.+... . ....++++++|+|||||++++.
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~--~----~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPA--D----MRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCH--H----HHHHHHHHHHHHSCSEEEEEEE
T ss_pred CcccCCCEEEEEECcchhhCCH--H----HHHHHHHHHHHHcCCCcEEEEE
Confidence 2123 68999997643322211 0 1247899999999999985544
No 34
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.41 E-value=2.4e-12 Score=119.30 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=81.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+++.+|..+++|+|++..+++.+++. ...|++++++|+.++ +. +++||.|+++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-----~~-~~~fD~v~~~~ 117 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKY-----DF-EEKYDMVVSAL 117 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTC-----CC-CSCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhcc-----CC-CCCceEEEEeC
Confidence 46899999999999999999999999999999887777666543 223899999999886 32 38999999986
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+-.+.... ....++++++++|||||.+++.+
T Consensus 118 ~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 118 SIHHLEDE------DKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp CGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCHH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 54432111 11368999999999999999864
No 35
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.40 E-value=1e-12 Score=120.46 Aligned_cols=123 Identities=9% Similarity=0.101 Sum_probs=93.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++.. |..+++|+|++.. +.+++...+++|++++++|+.++ ++++++||.|+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 111 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI-----PLPDNTVDFIF 111 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC-----SSCSSCEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC-----CCCCCCeeEEE
Confidence 46799999999999999999996 8889999997544 44455556778999999999876 33578999999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----------H--HHHHHHHHHHHhCCCCce
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----------E--EVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----------~--~~~~~~~~~~~~~~~~~~ 365 (416)
++..-.+..+ ...+++++.++|+|||.+++.+-. . -..+.+.+.+++.||...
T Consensus 112 ~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 176 (219)
T 3dh0_A 112 MAFTFHELSE--------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVG 176 (219)
T ss_dssp EESCGGGCSS--------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEE
T ss_pred eehhhhhcCC--------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEE
Confidence 8855443321 148999999999999999986311 0 013556778888888644
No 36
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.39 E-value=1.3e-12 Score=121.40 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=82.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-CCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-GITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.+++. ...|+.++++|+.++ ++++++||.|+++..
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~~~ 125 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSL-----PFENEQFEAIMAINS 125 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBC-----SSCTTCEEEEEEESC
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcC-----CCCCCCccEEEEcCh
Confidence 3689999999999999999998 66999999988888877654 346899999999876 335789999998865
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
-.+.... ..++++++++|+|||.+++.+
T Consensus 126 l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 126 LEWTEEP--------LRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp TTSSSCH--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred HhhccCH--------HHHHHHHHHHhCCCeEEEEEE
Confidence 5443221 378999999999999999975
No 37
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.38 E-value=3e-12 Score=122.54 Aligned_cols=119 Identities=12% Similarity=0.138 Sum_probs=96.6
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHH----HHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCR----DSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~----~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+++. .|..+++++|++..++ ++++..++ +|++++++|+.+. + ++++||.|
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~D~V 185 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG----F--DEKDVDAL 185 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC----C--SCCSEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc----c--cCCccCEE
Confidence 3679999999999999999998 6889999999755444 44444566 6899999998765 2 35789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceee
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~ 367 (416)
+++.|+|| .+++++.++|+|||.+++.+........+.+.+++.+|.....
T Consensus 186 ~~~~~~~~-------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 186 FLDVPDPW-------------NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEV 236 (277)
T ss_dssp EECCSCGG-------------GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEE
T ss_pred EECCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEE
Confidence 99877775 6789999999999999998887667777888888888754433
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.38 E-value=2.4e-12 Score=117.28 Aligned_cols=99 Identities=14% Similarity=0.241 Sum_probs=79.0
Q ss_pred CeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+|||||||+|.++..++++ |+.+++|+|++..+ .+++...++. |++++++|+.++ ++++++||.|+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D~v~~~ 118 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI-----PIEDNYADLIVSR 118 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC-----SSCTTCEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC-----CCCcccccEEEEC
Confidence 49999999999999999998 88899999975544 4444455654 799999999876 3357899999998
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
..-.+... ...++++++++|+|||.+++..
T Consensus 119 ~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 119 GSVFFWED--------VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp SCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHhhccC--------HHHHHHHHHHhCCCCCEEEEEe
Confidence 65444321 1479999999999999999963
No 39
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=2.9e-12 Score=114.62 Aligned_cols=107 Identities=15% Similarity=0.110 Sum_probs=77.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.++..+|++ ..+++|+|++.. |.++++..+++|+++++.|+..+ ... .+++||.|++
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l-~~~---~~~~fD~v~~ 95 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL-DHY---VREPIRAAIF 95 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG-GGT---CCSCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH-Hhh---ccCCcCEEEE
Confidence 3689999999999999999988 789999997554 44555566788999999888775 222 3678999987
Q ss_pred ECCCCCCCC-cch--hhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNR-PEH--RWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~-~h~--krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+++ +... .+. ........+++++.++|||||.+++..
T Consensus 96 ~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 96 NLG--YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCC--CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 742 2111 000 001112478899999999999998864
No 40
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.38 E-value=7.8e-12 Score=117.30 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=95.5
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+.+|||+|||+|.++..+|+. -|+-+++|+|++..+++.+.+. ...|+..+.+|+... ... +...+++|.|+..
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p-~~~-~~~~~~vDvVf~d 154 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP-EKY-RHLVEGVDGLYAD 154 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG-GGG-TTTCCCEEEEEEC
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc-ccc-ccccceEEEEEEe
Confidence 4799999999999999999997 4889999999887777665432 457999999999875 222 2356889999877
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe---------CcHHHHHHHHHHHHhCCCCcee
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---------DIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t---------D~~~~~~~~~~~~~~~~~~~~~ 366 (416)
++.||. ...++.++++.|||||++++.. +....+....+.+++.||....
T Consensus 155 ~~~~~~----------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e 213 (233)
T 4df3_A 155 VAQPEQ----------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKD 213 (233)
T ss_dssp CCCTTH----------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEE
T ss_pred ccCChh----------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEE
Confidence 665541 1378999999999999998852 2233455667788888987544
No 41
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.38 E-value=1.7e-12 Score=122.49 Aligned_cols=99 Identities=18% Similarity=0.294 Sum_probs=79.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++..+ +++|+|++..+ .+++...+++|+.|+++|+.++ |+++++||.|++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l-----~~~~~~fD~V~~ 109 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-----PFTDERFHIVTC 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-----CSCTTCEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC-----CCCCCCEEEEEE
Confidence 468999999999999999999875 99999975544 4444556778999999999876 446789999999
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++.-.|..+. +.+|++++++|||||.|++.
T Consensus 110 ~~~l~~~~d~--------~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 110 RIAAHHFPNP--------ASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhHhcCCH--------HHHHHHHHHHcCCCCEEEEE
Confidence 8665554321 48999999999999999985
No 42
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.38 E-value=3.3e-12 Score=121.03 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=91.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|..++.+|..+|+.+++|+|++.. |.++++..+++|++++++|+.++... +..+++||.|++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~--~~~~~~fD~I~s 157 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE--AGHREAYARAVA 157 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS--TTTTTCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc--cccCCCceEEEE
Confidence 367999999999999999999999999999997554 44555667888999999999887211 012478999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC--cHHHHHHHHHHHHhCCCCce
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD--IEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD--~~~~~~~~~~~~~~~~~~~~ 365 (416)
....++ +.+++.+.++|||||++++..- ..+-.....+.++..++...
T Consensus 158 ~a~~~~------------~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 158 RAVAPL------------CVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLG 207 (249)
T ss_dssp ESSCCH------------HHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEE
T ss_pred CCcCCH------------HHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEE
Confidence 743221 4889999999999999887542 23334445566777777543
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.38 E-value=4.1e-12 Score=117.54 Aligned_cols=128 Identities=18% Similarity=0.228 Sum_probs=92.0
Q ss_pred CCCeEEEEecc-ccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSG-NGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG-~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+||| +|.++..+|+.. ..+++|+|++..+ .++++.+++ |++++++|+..+ . ++.+++||.|+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-~---~~~~~~fD~I~ 128 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII-K---GVVEGTFDVIF 128 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS-T---TTCCSCEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh-h---hcccCceeEEE
Confidence 36899999999 999999999986 7899999975544 444555677 899999997654 2 22468999999
Q ss_pred EECCCCCCCCcchh-------------hhhhhHHHHHHHHhhccCCcEEEEEeCc-HHHHHHHHHHHHhCCCCce
Q 014919 305 IQCPNPDFNRPEHR-------------WRMVQRSLVEAVSDLLVHDGKVFLQSDI-EEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 305 ~~fpdpw~k~~h~k-------------rRl~~~~~l~~i~r~LkpgG~l~l~tD~-~~~~~~~~~~~~~~~~~~~ 365 (416)
++. |++...... .......+++++.++|||||.+++.+.. ....+.+.+.+++.++...
T Consensus 129 ~np--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 129 SAP--PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp ECC--CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred ECC--CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceE
Confidence 873 332211100 0011258999999999999999987543 3556778888899887543
No 44
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.37 E-value=2.4e-12 Score=119.84 Aligned_cols=121 Identities=11% Similarity=0.088 Sum_probs=88.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.++..+|+.. |..+++|+|++.. +++.++.+ .|++++++|+.+... ++..+++||.|+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~--~~~~~~~~D~V~ 152 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHK--YRMLIAMVDVIF 152 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGG--GGGGCCCEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhh--hcccCCcEEEEE
Confidence 36799999999999999999986 7789999998754 44444443 789999999987411 122467899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH----------HHHHHHHHHHhCCCCce
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE----------VMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~----------~~~~~~~~~~~~~~~~~ 365 (416)
++.+.|+ . ...++.++.++|||||.+++.+.... +.++ ++.+++.||...
T Consensus 153 ~~~~~~~-----~-----~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~ 212 (233)
T 2ipx_A 153 ADVAQPD-----Q-----TRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQ 212 (233)
T ss_dssp ECCCCTT-----H-----HHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEE
T ss_pred EcCCCcc-----H-----HHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceE
Confidence 9766443 1 13568889999999999999654321 3333 466677776543
No 45
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.37 E-value=1.5e-12 Score=123.68 Aligned_cols=102 Identities=10% Similarity=-0.009 Sum_probs=78.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH-hC--------------------CCcEEEEEcChhhh
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL-SG--------------------ITNGYFIATNATST 288 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~-~~--------------------l~nv~f~~~Da~~l 288 (416)
.+.+|||+|||+|..+..||++ +.+|+|||+++.+++.+++ .+ ..|++|+++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 3679999999999999999987 6799999998888887753 22 25899999999887
Q ss_pred hhhhhccC-CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 289 FRSIVASY-PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 289 ~~~~~~~~-~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.. .++||.|+....-.+.... ....++++++++|||||++++.|
T Consensus 146 -----~~~~~~~FD~V~~~~~l~~l~~~------~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 -----PRANIGKFDRIWDRGALVAINPG------DHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp -----GGGCCCCEEEEEESSSTTTSCGG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -----CcccCCCEEEEEEhhhhhhCCHH------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 212 3799999976443332111 12478999999999999997654
No 46
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.37 E-value=6.1e-12 Score=120.40 Aligned_cols=131 Identities=18% Similarity=0.238 Sum_probs=95.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.++..+++.+|..+++|+|++..++ ++++..+++|++|+++|+.+. + ++++||.|++
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~----~--~~~~fD~Iv~ 182 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA----L--AGQQFAMIVS 182 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG----G--TTCCEEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh----c--ccCCccEEEE
Confidence 35799999999999999999999999999999765544 444556788999999998764 2 3578999999
Q ss_pred ECCCCCCCCcchh---------hh--------hhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceee
Q 014919 306 QCPNPDFNRPEHR---------WR--------MVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 306 ~fpdpw~k~~h~k---------rR--------l~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~ 367 (416)
+.|..+....|-. .. -....+++.+.+.|+|||.+++..... ..+.+.+.+++.||.....
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-QGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-CHHHHHHHHHHTTCTTCCE
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-HHHHHHHHHHHCCCcEEEE
Confidence 8544332211100 00 123578999999999999999976543 3455777888888764433
No 47
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.37 E-value=6.1e-12 Score=116.04 Aligned_cols=101 Identities=13% Similarity=0.078 Sum_probs=76.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+|+..+..+++|+|++..++ +.++. ..|+.++++|+... ....+ ..++||.|++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--~~~v~~~~~d~~~~-~~~~~-~~~~fD~V~~ 132 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--RNNIIPLLFDASKP-WKYSG-IVEKVDLIYQ 132 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--CSSEEEECSCTTCG-GGTTT-TCCCEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--CCCeEEEEcCCCCc-hhhcc-cccceeEEEE
Confidence 46799999999999999999998777999999877543 33332 46899999998764 21112 2478999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.++|+ ....++++++++|||||+|++..
T Consensus 133 ~~~~~~----------~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DIAQKN----------QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CCCSTT----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccChh----------HHHHHHHHHHHHhCCCCEEEEEE
Confidence 754432 01256899999999999999973
No 48
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.37 E-value=1.3e-12 Score=122.64 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=84.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++.+|..+++|+|++..+++.+++. ..|++++++|+.++ + ++++||.|+++..-
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~d~~~~-----~-~~~~fD~v~~~~~l 105 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-LPNTNFGKADLATW-----K-PAQKADLLYANAVF 105 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-STTSEEEECCTTTC-----C-CSSCEEEEEEESCG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-CCCcEEEECChhhc-----C-ccCCcCEEEEeCch
Confidence 46789999999999999999999999999999988887777655 57899999999876 3 46889999998765
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.|..+ ...++++++++|||||.+++.+
T Consensus 106 ~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 106 QWVPD--------HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp GGSTT--------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred hhCCC--------HHHHHHHHHHhcCCCeEEEEEe
Confidence 55422 1488999999999999999975
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.36 E-value=3.6e-12 Score=115.15 Aligned_cols=111 Identities=14% Similarity=0.097 Sum_probs=80.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHH----HHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTH----CRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~----a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..++++. |..+++|+|++.. |.++++..++ +|++++++|+.++ ... .+++||.|
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~---~~~~fD~v 97 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNM-DKY---IDCPVKAV 97 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGG-GGT---CCSCEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH-hhh---ccCCceEE
Confidence 36799999999999999999985 6789999997554 4445555676 6899999999887 222 36889999
Q ss_pred EEECCC-CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 304 SIQCPN-PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 304 ~~~fpd-pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+++.|. |...............+++++.++|||||.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 988543 21111111111122479999999999999999874
No 50
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.36 E-value=2.7e-12 Score=122.16 Aligned_cols=102 Identities=16% Similarity=0.252 Sum_probs=83.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++.+|..+++|+|++.. |.+++...+++|++++++|+.++ ++++++||.|++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~ 111 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL-----PFEDSSFDHIFV 111 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC-----CSCTTCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC-----CCCCCCeeEEEE
Confidence 468999999999999999999999999999997544 44445556788999999999876 335789999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+....+..+. ..+++++.++|||||.+++..
T Consensus 112 ~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 112 CFVLEHLQSP--------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhhcCCH--------HHHHHHHHHHcCCCcEEEEEE
Confidence 8654443221 388999999999999999863
No 51
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.36 E-value=2.4e-12 Score=119.50 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=80.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+.+|||||||+|.++..+++..+ +++|+|++..+++.+++.-..|+.++++|+.++ + ++++||.|++...-.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~----~--~~~~fD~v~~~~~l~ 114 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDA----Q--LPRRYDNIVLTHVLE 114 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC----C--CSSCEEEEEEESCGG
T ss_pred CCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc----C--cCCcccEEEEhhHHH
Confidence 56899999999999999999865 799999988887777654333899999999876 1 478999999875433
Q ss_pred CCCCcchhhhhhhHHHHHHHH-hhccCCcEEEEEeCc
Q 014919 311 DFNRPEHRWRMVQRSLVEAVS-DLLVHDGKVFLQSDI 346 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~-r~LkpgG~l~l~tD~ 346 (416)
+..+. ..+|++++ ++|||||.+++.+.+
T Consensus 115 ~~~~~--------~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 115 HIDDP--------VALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp GCSSH--------HHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhcCH--------HHHHHHHHHHhcCCCCEEEEEcCC
Confidence 32211 48999999 999999999997643
No 52
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.35 E-value=2.4e-12 Score=117.15 Aligned_cols=118 Identities=17% Similarity=0.216 Sum_probs=91.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++. +..+++|+|++..+ .+++...++.|++++++|+.+. .+++||.|++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~~~~fD~i~~ 131 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-------VDGKFDLIVA 131 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-------CCSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-------CCCCceEEEE
Confidence 3689999999999999998874 67799999975544 4445556787899999998764 3678999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCcee
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~ 366 (416)
+.+.. + ...+++++.++|+|||.+++.+-.....+.+.+.+++.++....
T Consensus 132 ~~~~~------~-----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 132 NILAE------I-----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDL 181 (205)
T ss_dssp ESCHH------H-----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEE
T ss_pred CCcHH------H-----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEE
Confidence 84321 1 24889999999999999999755555567788888998876543
No 53
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.35 E-value=3.2e-12 Score=120.22 Aligned_cols=103 Identities=15% Similarity=0.129 Sum_probs=82.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCC--CcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGI--TNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l--~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+++++ ..+++|+|++..+++.+++... .|++++++|+.++ ++++++||.|+++.
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-----EFPENNFDLIYSRD 128 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-----CCCTTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-----CCCCCcEEEEeHHH
Confidence 46799999999999999999987 6799999998888777765432 6899999999876 44578999999885
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.-.+.... ....++++++++|||||.+++.+
T Consensus 129 ~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 129 AILALSLE------NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcChH------HHHHHHHHHHHHcCCCCEEEEEE
Confidence 43332111 12489999999999999999864
No 54
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.34 E-value=6.2e-12 Score=118.07 Aligned_cols=100 Identities=16% Similarity=0.122 Sum_probs=80.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++..|. +++|+|++.. |.+++...++.+ ++++++|+.++ ++++++||.|+
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 119 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-----PFQNEELDLIW 119 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----SSCTTCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-----CCCCCCEEEEE
Confidence 3579999999999999999999875 9999997554 444555667765 99999999776 44578999999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++..-.+. . .+.+++++.++|||||.+++.+
T Consensus 120 ~~~~l~~~-~--------~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYNI-G--------FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCCC-C--------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred ecChHhhc-C--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 98654443 1 1489999999999999999975
No 55
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.34 E-value=8.4e-12 Score=118.30 Aligned_cols=128 Identities=16% Similarity=0.259 Sum_probs=91.8
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+.+|||+|||+|.+++.+|++.+. +++|+|++.. |.+++..+++. |++++++|+.++. ..+ .+++||.|++
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~-~~~--~~~~fD~Ii~ 125 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT-DLI--PKERADIVTC 125 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG-GTS--CTTCEEEEEE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh-hhh--ccCCccEEEE
Confidence 679999999999999999998765 9999997544 44455556776 6999999999873 222 4689999999
Q ss_pred ECCCCCCCC-cch-------------hhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCce
Q 014919 306 QCPNPDFNR-PEH-------------RWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 306 ~fpdpw~k~-~h~-------------krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~ 365 (416)
| .|++.. .+. ..+.....+++.+.++|||||.+++...... ...+.+.+.++++...
T Consensus 126 n--pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 126 N--PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER-LLDIIDIMRKYRLEPK 196 (259)
T ss_dssp C--CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT-HHHHHHHHHHTTEEEE
T ss_pred C--CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH-HHHHHHHHHHCCCceE
Confidence 7 344322 000 0011235799999999999999999876554 4446777888776543
No 56
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.34 E-value=2.4e-12 Score=120.33 Aligned_cols=99 Identities=23% Similarity=0.338 Sum_probs=79.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++..+ +++|+|++.. +.+++...+++|++++++|+..+ ++++++||.|++
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~v~~ 93 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-----PFPDDSFDIITC 93 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-----CSCTTCEEEEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC-----CCCCCcEEEEEE
Confidence 468999999999999999999864 8999997544 44445556788999999999876 445789999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+.-.|..+ ...++++++++|||||.+++.
T Consensus 94 ~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 94 RYAAHHFSD--------VRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhccC--------HHHHHHHHHHHcCCCcEEEEE
Confidence 854433221 148899999999999999985
No 57
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.34 E-value=5.6e-12 Score=115.61 Aligned_cols=119 Identities=12% Similarity=0.047 Sum_probs=88.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..++++ ..+++|+|++..+++.+++.-..|++++++|+.++ +.. ++||.|+++..-
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~-----~~~-~~fD~v~~~~~l 116 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSF-----EVP-TSIDTIVSTYAF 116 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSC-----CCC-SCCSEEEEESCG
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhc-----CCC-CCeEEEEECcch
Confidence 3679999999999999999987 67999999988877776654335899999999886 324 899999998544
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe---CcHHHHHHHHHHHHhCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t---D~~~~~~~~~~~~~~~~~ 362 (416)
.+.... ....+|+++.++|||||.+++.+ +...........+...++
T Consensus 117 ~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 166 (220)
T 3hnr_A 117 HHLTDD------EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGF 166 (220)
T ss_dssp GGSCHH------HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTC
T ss_pred hcCChH------HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCC
Confidence 432211 11358999999999999999973 334444444455555544
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.34 E-value=3.4e-12 Score=123.25 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=80.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHH----h--CCCcEEEEEcChhhhhhhhhccCC-----
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQL----S--GITNGYFIATNATSTFRSIVASYP----- 297 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~----~--~l~nv~f~~~Da~~l~~~~~~~~~----- 297 (416)
.+.+|||||||+|.++..+++.+ +..+++|+|++..+++.+++ . ...|++|+++|+.++ ++.+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~~~~ 110 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDF-----KFLGADSVD 110 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCC-----GGGCTTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhC-----Ccccccccc
Confidence 47899999999999999999986 89999999986655554433 2 357899999999886 2234
Q ss_pred -CceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 298 -GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 298 -~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
++||.|+++..-.|. . ...+++++.++|||||.|++
T Consensus 111 ~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 799999998765554 1 24899999999999999988
No 59
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.33 E-value=3.4e-12 Score=117.19 Aligned_cols=108 Identities=10% Similarity=0.013 Sum_probs=80.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCCC-----cEEEEEcChhhhhhhhhccCCCce
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGIT-----NGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l~-----nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
.+.+|||||||+|.++..++++.|..+++|+|++..+++.++ ..++. |++++++|+... +..+++|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~f 103 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-----DKRFHGY 103 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-----CGGGCSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-----cccCCCc
Confidence 367999999999999999999988899999998666555443 33444 799999998654 2235789
Q ss_pred eEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 301 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
|.|+++..-.+.... ....+++++.++|||||.+++ +++..+
T Consensus 104 D~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~-~~~~~~ 145 (217)
T 3jwh_A 104 DAATVIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVT-TPNIEY 145 (217)
T ss_dssp SEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEE-EEBHHH
T ss_pred CEEeeHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEE-ccCccc
Confidence 999988543332111 114889999999999996555 555443
No 60
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.33 E-value=1.1e-11 Score=118.60 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=79.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHH----HHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDS----LQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~----a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+.+|||||||+|.++..+++. ..+++|+|++..+++. +...++ +|++++++|+.++. ++.+++||.|++
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~v~~ 142 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA----SHLETPVDLILF 142 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG----GGCSSCEEEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh----hhcCCCceEEEE
Confidence 579999999999999999988 6799999976555444 444566 68999999998872 125789999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+..-.|..+. ..+++++.++|||||.+++.+.+
T Consensus 143 ~~~l~~~~~~--------~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 143 HAVLEWVADP--------RSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp ESCGGGCSCH--------HHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CchhhcccCH--------HHHHHHHHHHcCCCeEEEEEEeC
Confidence 8654443221 48999999999999999997643
No 61
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.33 E-value=3.8e-12 Score=127.80 Aligned_cols=128 Identities=13% Similarity=0.163 Sum_probs=94.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHHh---------C-C--CcEEEEEcChhhhhhh-hhcc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQLS---------G-I--TNGYFIATNATSTFRS-IVAS 295 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~~---------~-l--~nv~f~~~Da~~l~~~-~~~~ 295 (416)
.+.+|||||||+|.++..+++.+ |..+++|+|++..+++.++++ | + .|++|+++|+.++... ..++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 36899999999999999999986 788999999876666555432 3 2 6899999999876211 0023
Q ss_pred CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH----------------------HHHHHH
Q 014919 296 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----------------------EVMLRM 353 (416)
Q Consensus 296 ~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~----------------------~~~~~~ 353 (416)
++++||.|++++.-.|..+. ..+|++++++|||||.|++.+-.. ...+.+
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~--------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNK--------LALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDF 234 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHH
T ss_pred CCCCEEEEEEccchhcCCCH--------HHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHH
Confidence 57899999998755543221 489999999999999999863110 112566
Q ss_pred HHHHHhCCCCce
Q 014919 354 KQQFLEYGKGKL 365 (416)
Q Consensus 354 ~~~~~~~~~~~~ 365 (416)
.+.+++.||...
T Consensus 235 ~~ll~~aGF~~v 246 (383)
T 4fsd_A 235 RRLVAEAGFRDV 246 (383)
T ss_dssp HHHHHHTTCCCE
T ss_pred HHHHHHCCCceE
Confidence 778888888644
No 62
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.33 E-value=4.6e-12 Score=122.46 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=82.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh----CC-------------------------------
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS----GI------------------------------- 275 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~----~l------------------------------- 275 (416)
+.+|||||||+|.++..+|+++|..+++|+|++..+++.++++ +.
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 6899999999999999999999999999999876666555432 10
Q ss_pred ---------------------------CcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHH
Q 014919 276 ---------------------------TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVE 328 (416)
Q Consensus 276 ---------------------------~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~ 328 (416)
.|++|+++|+........++.+++||.|+++....|..-.+.. -....+++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~--~~~~~~l~ 204 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGD--EGLKRMFR 204 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHH--HHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCH--HHHHHHHH
Confidence 4899999999754222223357899999988544332100000 01247899
Q ss_pred HHHhhccCCcEEEEEeC
Q 014919 329 AVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 329 ~i~r~LkpgG~l~l~tD 345 (416)
+++++|+|||.|++.+.
T Consensus 205 ~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHEEEEEEEEEECC
T ss_pred HHHHHhCCCcEEEEecC
Confidence 99999999999999753
No 63
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.33 E-value=1.4e-11 Score=120.01 Aligned_cols=128 Identities=16% Similarity=0.131 Sum_probs=93.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--------CCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--------GITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--------~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
++.+|||||||+|.++..+++..|..+++++|++..+++.+++. ..+|++++.+|+.+++.. ..+++||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~---~~~~~fD 171 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ---TPDNTYD 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS---SCTTCEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh---ccCCcee
Confidence 46799999999999999999887788999999866555544332 236799999999887321 1367899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH----HHHHHHHHHHHhCCCCc
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~----~~~~~~~~~~~~~~~~~ 364 (416)
.|+++.++|+... .++...+++++++++|||||.+++.+... .....+.+.+++.||..
T Consensus 172 vIi~d~~~~~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~ 234 (304)
T 3bwc_A 172 VVIIDTTDPAGPA----SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFAS 234 (304)
T ss_dssp EEEEECC-------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSE
T ss_pred EEEECCCCccccc----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCc
Confidence 9999988876321 22444689999999999999999986542 34566777888887753
No 64
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.33 E-value=5.3e-12 Score=117.83 Aligned_cols=121 Identities=14% Similarity=0.072 Sum_probs=90.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+.+|||||||+|.++..+++. +.+++|+|++..+++.+++. +.++++|+.+.+. ++++++||.|++...-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~----~~~~~~d~~~~~~---~~~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK----FNVVKSDAIEYLK---SLPDKYLDGVMISHFVE 112 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT----SEEECSCHHHHHH---TSCTTCBSEEEEESCGG
T ss_pred CCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh----cceeeccHHHHhh---hcCCCCeeEEEECCchh
Confidence 688999999999999999998 56899999988888877644 8999999988632 33578999999875443
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH------------------HHHHHHHHHhCCCCcee
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV------------------MLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~------------------~~~~~~~~~~~~~~~~~ 366 (416)
|..... ...++++++++|||||.+++.+.+... .+.+.+.+++.|+....
T Consensus 113 ~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 113 HLDPER------LFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp GSCGGG------HHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred hCCcHH------HHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence 332111 148999999999999999997643221 13456677777876443
No 65
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.32 E-value=1.1e-11 Score=122.99 Aligned_cols=118 Identities=16% Similarity=0.101 Sum_probs=88.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..+||+|||+|.+++.+|... |+.+++|+|++. .|.++++..++++++|+++|+.++ +.+..++|.|+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~-----~~~~~~~D~Ii 277 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL-----PRFFPEVDRIL 277 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG-----GGTCCCCSEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC-----ccccCCCCEEE
Confidence 35789999999999999999987 889999999754 455556667888999999999987 22356789999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHH
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLR 352 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~ 352 (416)
+|.|..+....+....-.+..+++++.++|+|||.+++.|.+..+++.
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~~ 325 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKR 325 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHHH
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHH
Confidence 984432211111111223468999999999999999999988766443
No 66
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.32 E-value=1.1e-11 Score=115.37 Aligned_cols=123 Identities=12% Similarity=0.089 Sum_probs=87.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+|+..|..+++|+|++..+++.++++ ..+|+.++++|+... ..++++. ++||.|+..+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~-~~~~~~~-~~~D~v~~~~ 151 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKP-QEYANIV-EKVDVIYEDV 151 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCG-GGGTTTS-CCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCc-ccccccC-ccEEEEEEec
Confidence 36799999999999999999998888999999887766655432 237899999999873 1112323 7899998554
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC-----c----HHHH-HHHHHHHHhCCCCce
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-----I----EEVM-LRMKQQFLEYGKGKL 365 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD-----~----~~~~-~~~~~~~~~~~~~~~ 365 (416)
++|- ....+++++.++|||||.+++... . ..++ +++. .+.+.++...
T Consensus 152 ~~~~----------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~ 208 (230)
T 1fbn_A 152 AQPN----------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIV 208 (230)
T ss_dssp CSTT----------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEE
T ss_pred CChh----------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEE
Confidence 4331 124789999999999999998521 1 1223 3344 7777777543
No 67
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.32 E-value=6.5e-13 Score=130.11 Aligned_cols=209 Identities=16% Similarity=0.167 Sum_probs=120.5
Q ss_pred ChhhHHHHHHHhccCCeEE--Eec---cceEEEeCCCCchHHHHHHHHHhhhcCCCCeEEEcchhHH---HHhcccCC-c
Q 014919 115 GPRSVEEITSTITKCKKVI--WVG---PVKFRFSSQYSNGASKLTGMLCKVSQGTCNVTVIGSMACK---AIAKVSSS-I 185 (416)
Q Consensus 115 Gp~T~~~~~~~~~~a~~i~--wnG---p~G~~e~~~f~~GT~~l~~~~a~~~~~~~~~~v~gg~~~~---~~~~~~~~-~ 185 (416)
||.|++++++.++..++.+ |.. .+|+++.+ .|+|.+.+.-+.........++.+..... ........ .
T Consensus 38 ~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~---~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 114 (335)
T 2r3s_A 38 GIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQ---AEGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLT 114 (335)
T ss_dssp SEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE---TTEEEECHHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHH
T ss_pred CCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEec---CCEEecCHHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHH
Confidence 8999999999999876653 444 45888753 46665543321211111122222221111 11111122 3
Q ss_pred cceeeecCCceE--eeeecccCCCCc-ccccccC-c----cccccccccCC--CCCCeEEEEeccccHHHHHHHHhCCCC
Q 014919 186 FGLNMVESGSAV--WEFLKGRMLPGV-SALDRAF-P----FDIDWSAAYHD--PAQPLVVDIGSGNGLFLLGMARKRKDL 255 (416)
Q Consensus 186 ~~~st~~GGGa~--le~l~gr~lPg~-~aL~~~~-p----~~~~~~~~f~~--~~~~~vLDIGCG~G~~~~~lA~~~p~~ 255 (416)
+.+++ |...+ |+.+.. .|.. ..+...+ + ....+.+.++. ....+|||||||+|.++..+++++|+.
T Consensus 115 ~~l~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~ 190 (335)
T 2r3s_A 115 AAVLK--GGTAISSEGTLSP--EHPVWVQFAKAMSPMMANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNA 190 (335)
T ss_dssp HHHHH--TSCCSTTTGGGST--TCTHHHHHHHHSGGGGHHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTC
T ss_pred HHHhc--CCCCCCCcccccC--CHHHHHHHHHHHHHHHhhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCC
Confidence 56666 33333 222211 1111 1111110 0 00011222221 246899999999999999999999999
Q ss_pred eEEEEchHHHHHHH----HHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHH
Q 014919 256 NFLGLELVTHCRDS----LQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAV 330 (416)
Q Consensus 256 ~~iGvD~~~~a~~~----a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i 330 (416)
+++|+|++ .+++. +...++. +++|+++|+.+. +. +..+|.|++..+-.+.... ....+++++
T Consensus 191 ~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~-~~~~D~v~~~~~l~~~~~~------~~~~~l~~~ 257 (335)
T 2r3s_A 191 EIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV-----DY-GNDYDLVLLPNFLHHFDVA------TCEQLLRKI 257 (335)
T ss_dssp EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS-----CC-CSCEEEEEEESCGGGSCHH------HHHHHHHHH
T ss_pred eEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC-----CC-CCCCcEEEEcchhccCCHH------HHHHHHHHH
Confidence 99999986 55444 3445665 699999998764 21 3349999987432211111 124889999
Q ss_pred HhhccCCcEEEEE
Q 014919 331 SDLLVHDGKVFLQ 343 (416)
Q Consensus 331 ~r~LkpgG~l~l~ 343 (416)
+++|+|||++++.
T Consensus 258 ~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 258 KTALAVEGKVIVF 270 (335)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHhCCCCcEEEEE
Confidence 9999999998885
No 68
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.32 E-value=7.4e-12 Score=117.48 Aligned_cols=121 Identities=17% Similarity=0.225 Sum_probs=89.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+|+.. +.+++|+|++..+ .++++..++. |+.|+++|+.++ ++ +++||.|+
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~-~~~fD~V~ 108 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-----VA-NEKCDVAA 108 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-----CC-SSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC-----Cc-CCCCCEEE
Confidence 46799999999999999999987 6799999975544 4444556764 899999999876 32 68899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc-------HHH--------------HHHHHHHHHhCCCC
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------EEV--------------MLRMKQQFLEYGKG 363 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~-------~~~--------------~~~~~~~~~~~~~~ 363 (416)
+...-.+... ...+|++++++|||||.+++.... ..+ ...+.+.+++.|+.
T Consensus 109 ~~~~~~~~~~--------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 180 (256)
T 1nkv_A 109 CVGATWIAGG--------FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYD 180 (256)
T ss_dssp EESCGGGTSS--------SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBC
T ss_pred ECCChHhcCC--------HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCe
Confidence 8643322211 148899999999999999986311 111 14566778888876
Q ss_pred ce
Q 014919 364 KL 365 (416)
Q Consensus 364 ~~ 365 (416)
..
T Consensus 181 ~~ 182 (256)
T 1nkv_A 181 VV 182 (256)
T ss_dssp CC
T ss_pred eE
Confidence 54
No 69
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.31 E-value=1.2e-11 Score=110.35 Aligned_cols=116 Identities=12% Similarity=0.220 Sum_probs=88.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCc--EEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITN--GYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~n--v~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+++. ..+++|+|++..+ .+++...+++| ++++++|+.+.+ .++++|.|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~D~v 123 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------KDRKYNKI 123 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------TTSCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc------ccCCceEE
Confidence 4679999999999999999988 7799999975544 44444567787 999999987641 36789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
+++.|..| . . -....+++++.++|+|||.+++.+........+.+.+++.
T Consensus 124 ~~~~~~~~--~---~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 124 ITNPPIRA--G---K--EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp EECCCSTT--C---H--HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred EECCCccc--c---h--hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH
Confidence 98743222 1 1 1124889999999999999999887766666677777665
No 70
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.31 E-value=1.1e-11 Score=111.62 Aligned_cols=106 Identities=11% Similarity=0.081 Sum_probs=79.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.++..+++. +..+++|+|++.. |.++++..+++|++++++|+.+++.. + ++++||.|++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~--~~~~fD~i~~ 119 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA-G--TTSPVDLVLA 119 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH-C--CSSCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh-c--cCCCccEEEE
Confidence 4689999999999999988875 5668999997544 45555566788999999999987432 2 3689999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHh--hccCCcEEEEEeCc
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSD--LLVHDGKVFLQSDI 346 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r--~LkpgG~l~l~tD~ 346 (416)
+.| ++.... ....+++.+.+ +|+|||.+++.+..
T Consensus 120 ~~p--~~~~~~-----~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 120 DPP--YNVDSA-----DVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CCC--TTSCHH-----HHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCC--CCcchh-----hHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 743 321100 12478899998 99999999997643
No 71
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.31 E-value=9.7e-13 Score=119.51 Aligned_cols=131 Identities=12% Similarity=0.090 Sum_probs=79.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.++..+++..|+.+++|+|++..+++.+ ...+. |++++++|+.+.++... ...++||.|++
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~-~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERA-ERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHH-HTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhh-hccCcccEEEE
Confidence 46899999999999999999999999999999866555443 33444 79999999887432100 02389999999
Q ss_pred ECCCCCCCCcchhh----------hh--------hhHHHHHHHHhhccCCcE-EEEEeCcHHHHHHHHHHHH--hCCCC
Q 014919 306 QCPNPDFNRPEHRW----------RM--------VQRSLVEAVSDLLVHDGK-VFLQSDIEEVMLRMKQQFL--EYGKG 363 (416)
Q Consensus 306 ~fpdpw~k~~h~kr----------Rl--------~~~~~l~~i~r~LkpgG~-l~l~tD~~~~~~~~~~~~~--~~~~~ 363 (416)
+.|..+....++-. .+ ....+++++.++|||||. +++.+... ..+.+.+.+. +.++.
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~l~~~~~gf~ 185 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN-QADEVARLFAPWRERGF 185 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS-CHHHHHHHTGGGGGGTE
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc-cHHHHHHHHHHhhcCCc
Confidence 74322111111000 00 115889999999999999 77765433 3455666677 66664
No 72
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.31 E-value=1.9e-11 Score=113.47 Aligned_cols=103 Identities=17% Similarity=0.144 Sum_probs=80.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+.+|||||||+|.++..+++.. ..+++|+|++..+++.+++... .++.++++|+.++ ++++++||.|++..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKL-----HLPQDSFDLAYSSLA 116 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGC-----CCCTTCEEEEEEESC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhc-----cCCCCCceEEEEecc
Confidence 46799999999999999999873 2399999998888877765432 4799999999876 335789999998854
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
-.+... ...++++++++|+|||.+++.+.+
T Consensus 117 l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 117 LHYVED--------VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp GGGCSC--------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccch--------HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 333211 148899999999999999997643
No 73
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.31 E-value=7.2e-12 Score=118.78 Aligned_cols=121 Identities=15% Similarity=0.116 Sum_probs=90.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+|+. +..+++|+|++.. |.++++..+++ |++++++|+.++ ++++++||.|+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~i~ 119 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-----PFRNEELDLIW 119 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----CCCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-----CCCCCCEEEEE
Confidence 4689999999999999999998 8889999997554 44445556764 599999999876 33578999999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc-------HH---H----------HHHHHHHHHhCCCCc
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------EE---V----------MLRMKQQFLEYGKGK 364 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~-------~~---~----------~~~~~~~~~~~~~~~ 364 (416)
++.+-.+. . ...+++++.++|||||.+++.+-. .. + ...+.+.+++.||..
T Consensus 120 ~~~~~~~~-~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 120 SEGAIYNI-G--------FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp ESSCGGGT-C--------HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred EcCCceec-C--------HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 87543332 1 248999999999999999986421 11 1 234567788888764
Q ss_pred e
Q 014919 365 L 365 (416)
Q Consensus 365 ~ 365 (416)
.
T Consensus 191 v 191 (267)
T 3kkz_A 191 V 191 (267)
T ss_dssp E
T ss_pred E
Confidence 4
No 74
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.31 E-value=5.7e-12 Score=114.96 Aligned_cols=102 Identities=13% Similarity=0.028 Sum_probs=83.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+.+|||||||+|.++..+++. ..+++|+|++..+++.+++.+..|++++++|+.++ + ++++||.|++++.-.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~----~--~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW----T--PDRQWDAVFFAHWLA 118 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC----C--CSSCEEEEEEESCGG
T ss_pred CCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC----C--CCCceeEEEEechhh
Confidence 579999999999999999998 66999999998888888777778999999999775 2 478999999885433
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+.... ....+++++.++|+|||.+++.+..
T Consensus 119 ~~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 119 HVPDD------RFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp GSCHH------HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHH------HHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 32111 1148899999999999999997543
No 75
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.31 E-value=5.2e-12 Score=117.95 Aligned_cols=125 Identities=10% Similarity=0.072 Sum_probs=90.8
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh----CCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS----GITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~----~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.++..+++.. ..+++|+|++..+++.++++ +..++.++++|+.++ +..+++||.|++.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF-----TPEPDSYDVIWIQ 153 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC-----CCCSSCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc-----CCCCCCEEEEEEc
Confidence 6799999999999999999886 56999999877666655433 234699999998776 3346789999988
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH--------------HHHHHHHHHHHhCCCCceee
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE--------------EVMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~--------------~~~~~~~~~~~~~~~~~~~~ 367 (416)
....+.... ....+++++.++|||||.+++.+... ...+.+.+.+++.||.....
T Consensus 154 ~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 154 WVIGHLTDQ------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp SCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred chhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 543332111 11478999999999999999854211 02455677788888865433
No 76
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.31 E-value=7.4e-12 Score=123.28 Aligned_cols=115 Identities=15% Similarity=0.130 Sum_probs=87.0
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHHH----HHHHhC-----------CCcEEEEEcChhhhhhhhh
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCRD----SLQLSG-----------ITNGYFIATNATSTFRSIV 293 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~~----~a~~~~-----------l~nv~f~~~Da~~l~~~~~ 293 (416)
.+.+|||+|||+|.++..+|+. .|..+++|+|++..+++ ++...+ ..|++++++|+.+...
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~--- 181 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE--- 181 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc---
Confidence 4679999999999999999998 57789999997554444 333221 3689999999987521
Q ss_pred ccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 294 ASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 294 ~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
++++++||.|+++.++|| .+++++.++|+|||.+++.+..........+.+.++
T Consensus 182 ~~~~~~fD~V~~~~~~~~-------------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 182 DIKSLTFDAVALDMLNPH-------------VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTC 235 (336)
T ss_dssp ------EEEEEECSSSTT-------------TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred ccCCCCeeEEEECCCCHH-------------HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhc
Confidence 123568999999888876 478999999999999999887777777777777654
No 77
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.31 E-value=1.4e-11 Score=114.55 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=77.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCC--cEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~--nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.++|||||||+|..++.||+..| +.+++++|++. .|++++++.++. |++++++|+.+.++. + .+++||.|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~-~--~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR-L--ANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG-S--CTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH-h--cCCCcCeE
Confidence 45899999999999999999875 88999999744 455556666776 799999999887532 1 36899999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
++. ++. .+ .+.+++++.++|||||.+++
T Consensus 134 ~~d---~~~--~~------~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 134 FGQ---VSP--MD------LKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEC---CCT--TT------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEc---CcH--HH------HHHHHHHHHHHcCCCcEEEE
Confidence 874 331 11 24789999999999999998
No 78
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.31 E-value=1.4e-11 Score=114.97 Aligned_cols=99 Identities=18% Similarity=0.233 Sum_probs=78.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+|+..|..+++|+|++. .|.++++..++. |++++++|+.+.++. ..+++||.|+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~~fD~V~ 147 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFEN---VNDKVYDMIF 147 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHH---HTTSCEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh---hccCCccEEE
Confidence 36899999999999999999988899999999754 445555566775 899999999876430 1267899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
+..+.+ ..+.+++.+.+.|||||.|++
T Consensus 148 ~~~~~~-----------~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 148 IDAAKA-----------QSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EETTSS-----------SHHHHHHHHGGGEEEEEEEEE
T ss_pred EcCcHH-----------HHHHHHHHHHHhcCCCeEEEE
Confidence 864321 124799999999999999988
No 79
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.30 E-value=7.8e-12 Score=116.60 Aligned_cols=106 Identities=9% Similarity=-0.064 Sum_probs=76.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC---CCcEEEEEcChhhhhhhhhccCCCceeEEEE-
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG---ITNGYFIATNATSTFRSIVASYPGKLILVSI- 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~---l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~- 305 (416)
.+.+|||||||+|.++..+++..+ .+++|+|++..+++.++++. ..|++++++|+.+++. ++++++||.|++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~---~~~~~~fD~V~~d 135 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP---TLPDGHFDGILYD 135 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG---GSCTTCEEEEEEC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhc---ccCCCceEEEEEC
Confidence 367999999999999999977543 48999998766665554321 2689999999988632 335789999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.|+... ...|. .....++++++|+|||||+|++.
T Consensus 136 ~~~~~~-~~~~~---~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 136 TYPLSE-ETWHT---HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBG-GGTTT---HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred Ccccch-hhhhh---hhHHHHHHHHHHhcCCCeEEEEE
Confidence 443211 11111 11247799999999999999874
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.30 E-value=5.1e-11 Score=105.23 Aligned_cols=114 Identities=15% Similarity=0.179 Sum_probs=91.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.++..+++ +..+++|+|++.. |.+++...+++|++++++|+.+. + +++++|.|++
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~--~~~~~D~i~~ 106 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV----L--DKLEFNKAFI 106 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH----G--GGCCCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc----c--cCCCCcEEEE
Confidence 467999999999999999998 7889999997544 44445556778999999998763 2 2478999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCce
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~ 365 (416)
+.+ .+ ...+++++.++ |||.+++.+........+.+.++++++...
T Consensus 107 ~~~------~~------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 107 GGT------KN------IEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp CSC------SC------HHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEE
T ss_pred CCc------cc------HHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEE
Confidence 754 11 24788999888 999999998777788889999999986543
No 81
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.30 E-value=4.6e-12 Score=116.33 Aligned_cols=105 Identities=7% Similarity=0.080 Sum_probs=78.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCCC-----cEEEEEcChhhhhhhhhccCCCce
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGIT-----NGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l~-----nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
.+.+|||||||+|.++..+++..|..+++|+|++..+++.++ ..++. |+.++++|+... +..+++|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~f 103 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-----DKRFSGY 103 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-----CGGGTTC
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-----ccccCCC
Confidence 467999999999999999999988899999998666555543 33343 899999998654 2246789
Q ss_pred eEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 301 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
|.|+++..-.+.... ....+++++.++|||||.++. +++
T Consensus 104 D~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i~-~~~ 142 (219)
T 3jwg_A 104 DAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIVS-TPN 142 (219)
T ss_dssp SEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEE-EEB
T ss_pred CEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEEE-ccc
Confidence 999987543332111 013889999999999996554 444
No 82
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.30 E-value=1.5e-11 Score=110.47 Aligned_cols=101 Identities=10% Similarity=0.030 Sum_probs=78.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..++ +++...+++|++++++|+.++ ++ +++||.|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~~-~~~~D~v~~ 103 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL-----TF-DRQYDFILS 103 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC-----CC-CCCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC-----CC-CCCceEEEE
Confidence 3579999999999999999987 67999999755444 444456777899999999876 33 678999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.+-.+.... ....+++++.++|+|||.+++.+
T Consensus 104 ~~~l~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLMFLEAK------TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGGGSCGG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEE
Confidence 8654432211 12489999999999999987754
No 83
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.30 E-value=1.8e-11 Score=116.13 Aligned_cols=101 Identities=16% Similarity=0.175 Sum_probs=80.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++++ +.+++|+|++..+ .+++...++. +++++++|+.++ |+++++||.|+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 134 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-----PFEDASFDAVW 134 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----CSCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-----CCCCCCccEEE
Confidence 46899999999999999999987 6899999975544 4444455664 799999999876 44578999999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+...-.|..+. ..+++++.++|||||.+++.+
T Consensus 135 ~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHHMPDR--------GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTTSSCH--------HHHHHHHHTTEEEEEEEEEEE
T ss_pred EechhhhCCCH--------HHHHHHHHHHcCCCeEEEEEE
Confidence 88655543221 488999999999999999864
No 84
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.30 E-value=4.1e-11 Score=106.54 Aligned_cols=117 Identities=15% Similarity=0.237 Sum_probs=92.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.++..+++.. .+++|+|++..++ +++...++ .++.++++|+.+.+ + ..+++|.|+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~-~~~~~D~v~ 105 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL----C-KIPDIDIAV 105 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH----T-TSCCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhc----c-cCCCCCEEE
Confidence 46799999999999999999986 7999999755444 44445666 68999999987632 2 125899998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCc
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~ 364 (416)
+..+.++ ...+++.+.++|+|||.+++.+........+.+.+++.++..
T Consensus 106 ~~~~~~~-----------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 106 VGGSGGE-----------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDV 154 (192)
T ss_dssp ESCCTTC-----------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCC
T ss_pred ECCchHH-----------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCce
Confidence 8643221 148899999999999999998877777888888999988743
No 85
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.30 E-value=1.8e-11 Score=118.46 Aligned_cols=97 Identities=10% Similarity=0.090 Sum_probs=76.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..++.+.++++++|+|++. .|++++++.++.|++|+++|+.++ + +++||.|++
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l-----~--d~~FDvV~~ 194 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI-----D--GLEFDVLMV 194 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG-----G--GCCCSEEEE
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC-----C--CCCcCEEEE
Confidence 47899999999998775555556799999999754 455555556888999999999886 3 578999987
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
...-| . ..++++++.++|||||+|.+..
T Consensus 195 ~a~~~------d-----~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 195 AALAE------P-----KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CTTCS------C-----HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCcc------C-----HHHHHHHHHHHcCCCcEEEEEc
Confidence 53211 1 1489999999999999999975
No 86
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.29 E-value=1.1e-11 Score=110.20 Aligned_cols=123 Identities=14% Similarity=0.216 Sum_probs=90.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||+|||+|.++..++++. +++|+|++..+++. ..|++++++|+.+. + .+++||.|+++.|-
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-----~~~~~~~~~d~~~~----~--~~~~fD~i~~n~~~ 88 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-----HRGGNLVRADLLCS----I--NQESVDVVVFNPPY 88 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-----CSSSCEEECSTTTT----B--CGGGCSEEEECCCC
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-----ccCCeEEECChhhh----c--ccCCCCEEEECCCC
Confidence 35799999999999999999986 99999998888775 56799999999763 2 35899999998543
Q ss_pred CCCCCcch-hhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceee
Q 014919 310 PDFNRPEH-RWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 310 pw~k~~h~-krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~ 367 (416)
-|...... ........+++++.+.| |||.+++.+......+.+.+.+++.+|.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 89 VPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp BTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEE
T ss_pred ccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEE
Confidence 33222100 00000126788888888 99999997755556777888899998865443
No 87
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.29 E-value=8.2e-12 Score=116.89 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=90.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC--CCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG--ITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~--l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+++.. ..+++|+|++..+++.+++.- ..+++++++|+..+ ++++++||.|++.+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~~ 166 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-----TLPPNTYDLIVIQW 166 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-----CCCSSCEEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC-----CCCCCCeEEEEEcc
Confidence 46899999999999999999886 557999998877777665432 26899999999876 33578999999875
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH---------------HHHHHHHHHHhCCCCce
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE---------------VMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~---------------~~~~~~~~~~~~~~~~~ 365 (416)
.-.+.... ....++++++++|||||.+++.+.... -.+.+.+.++++||...
T Consensus 167 ~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 167 TAIYLTDA------DFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp CGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred hhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 43322110 124889999999999999999752100 12445666777777644
No 88
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.29 E-value=1.6e-11 Score=116.76 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=89.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----H---hCCC-cEEEEEcChhhhhhhhh--ccCCCce
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----L---SGIT-NGYFIATNATSTFRSIV--ASYPGKL 300 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~---~~l~-nv~f~~~Da~~l~~~~~--~~~~~s~ 300 (416)
+.+|||||||+|.+++.+|++.|..+++|+|++..+.+.++ . +++. +++++++|+.++..... ++.+++|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 57899999999999999999999999999998666555443 3 4454 59999999987632110 1246789
Q ss_pred eEEEEECCCCCCCCc-----chhh-------hhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 301 ILVSIQCPNPDFNRP-----EHRW-------RMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 301 D~v~~~fpdpw~k~~-----h~kr-------Rl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
|.|+++ .|++... ...+ ......+++.+.++|||||.|++...... ..++.+.+.+.
T Consensus 117 D~Vv~n--PPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~l~~~ 185 (260)
T 2ozv_A 117 HHVIMN--PPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQS-VAEIIAACGSR 185 (260)
T ss_dssp EEEEEC--CCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGG-HHHHHHHHTTT
T ss_pred CEEEEC--CCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHH-HHHHHHHHHhc
Confidence 999998 3443221 0000 11236889999999999999999887654 34466666553
No 89
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.29 E-value=2.4e-11 Score=117.98 Aligned_cols=124 Identities=14% Similarity=0.139 Sum_probs=88.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------C--CCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------G--ITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~--l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|..+..+++..|..+++++|++..+++.++++ + .++++++++|+.+.++. .+++||
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK----FKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG----CSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh----CCCCce
Confidence 45799999999999999999987888999999866555544322 2 36899999999876431 357899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
.|+++.++||... ...+...++++.++++|+|||.+++.+.. ......+.+.+++.
T Consensus 166 ~Ii~d~~~~~~~~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 225 (296)
T 1inl_A 166 VIIIDSTDPTAGQ---GGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV 225 (296)
T ss_dssp EEEEEC-------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCcccCc---hhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH
Confidence 9999888886422 12234569999999999999999998644 33455556666664
No 90
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.29 E-value=4.5e-12 Score=117.54 Aligned_cols=115 Identities=10% Similarity=0.132 Sum_probs=88.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccC-CCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASY-PGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~-~~s~D~v~~~fp 308 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.++++ ..|++|+++|+.+.+ |+. +++||.|+++ +
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~d~~~~~----~~~~~~~fD~v~~~-~ 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-APHADVYEWNGKGEL----PAGLGAPFGLIVSR-R 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-CTTSEEEECCSCSSC----CTTCCCCEEEEEEE-S
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-CCCceEEEcchhhcc----CCcCCCCEEEEEeC-C
Confidence 4689999999999999999998 57999999988888877666 678999999995432 335 7899999987 3
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCcee
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~ 366 (416)
++. .++++++++|||||.++..... ...+.+.+.+.+.|+....
T Consensus 120 ~~~-------------~~l~~~~~~LkpgG~l~~~~~~-~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 120 GPT-------------SVILRLPELAAPDAHFLYVGPR-LNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp CCS-------------GGGGGHHHHEEEEEEEEEEESS-SCCTHHHHHHHHTTCEEEE
T ss_pred CHH-------------HHHHHHHHHcCCCcEEEEeCCc-CCHHHHHHHHHHCCCeEEE
Confidence 332 6788999999999999843221 1233466778888876443
No 91
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.29 E-value=2e-11 Score=112.41 Aligned_cols=102 Identities=13% Similarity=0.086 Sum_probs=78.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
+.+|||||||+|.++..+|+..| +.+++|+|++. .|.+++...++.| ++++++|+.+.++...+...++||.|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 67999999999999999999988 78999999754 4455555667765 999999998764432211126799998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+..+.+ ..+.+++.+.++|+|||.+++.
T Consensus 139 ~d~~~~-----------~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 139 IDADKQ-----------NNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp ECSCGG-----------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred EcCCcH-----------HHHHHHHHHHHhcCCCcEEEEe
Confidence 753211 1258999999999999988874
No 92
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=7.9e-12 Score=119.39 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=80.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++ +..+++|+|++..+++.+++.. +|+.++++|+.++ + .+++||.|++++.-
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~d~~~~-----~-~~~~fD~v~~~~~l 127 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-PHLHFDVADARNF-----R-VDKPLDAVFSNAML 127 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-TTSCEEECCTTTC-----C-CSSCEEEEEEESCG
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-CCCEEEECChhhC-----C-cCCCcCEEEEcchh
Confidence 467999999999999999998 6889999999888877765543 7899999999876 3 25799999998655
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.|..+. +.++++++++|||||.+++.+
T Consensus 128 ~~~~d~--------~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 128 HWVKEP--------EAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp GGCSCH--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred hhCcCH--------HHHHHHHHHhcCCCcEEEEEe
Confidence 443321 488999999999999999875
No 93
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.28 E-value=1.9e-11 Score=111.02 Aligned_cols=110 Identities=12% Similarity=0.100 Sum_probs=84.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC--CCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG--ITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~--l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+++..+. +++|+|++..+++.++++. ..++.++++|+.++ ++++++||.|+++.
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~v~~~~ 115 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKL-----DFPSASFDVVLEKG 115 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSC-----CSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcC-----CCCCCcccEEEECc
Confidence 3678999999999999999998654 8999998877777665432 35899999999876 33578999998753
Q ss_pred ---------CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 308 ---------PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 308 ---------pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
++||....++.. ....+++++.++|||||.+++.+-..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 116 TLDALLAGERDPWTVSSEGVH--TVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHTTTCSCTTSCCHHHHH--HHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred chhhhccccccccccccchhH--HHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 346654332221 12589999999999999999987554
No 94
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2e-11 Score=115.22 Aligned_cols=100 Identities=20% Similarity=0.187 Sum_probs=78.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
+.+|||||||+|.++..+|+..| +.+++|+|++. .|.+++++.++. |++++++|+.+.++... ..++||.|+
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~--~~~~fD~V~ 141 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG--ECPAFDLIF 141 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC--SCCCCSEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC--CCCCeEEEE
Confidence 68999999999999999999988 89999999754 445555566776 79999999988644221 235899998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+..+.+ -.+.+++++.++|||||.|++.
T Consensus 142 ~d~~~~-----------~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 142 IDADKP-----------NNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ECSCGG-----------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred ECCchH-----------HHHHHHHHHHHhcCCCeEEEEe
Confidence 853211 1257999999999999999874
No 95
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.28 E-value=1.5e-11 Score=113.35 Aligned_cols=103 Identities=18% Similarity=0.301 Sum_probs=79.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH----hCC-----CcEEEEEcChhhhhhhhhccCCCce
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL----SGI-----TNGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~----~~l-----~nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.+++ .++ .++.++++|+..+ ++.+++|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~ 102 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-----SFHDSSF 102 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-----CSCTTCE
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-----CCCCCce
Confidence 3689999999999999999998 6799999987766665544 233 2689999999876 3357899
Q ss_pred eEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 301 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
|.|+++..-.+...... ...+++++.++|+|||.+++.+
T Consensus 103 D~v~~~~~l~~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKE-----RSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEEEESCGGGCCCHHH-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEcchhhcCCCHHH-----HHHHHHHHHHHcCCCeEEEEEE
Confidence 99998854433222211 1378999999999999999864
No 96
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=9.4e-12 Score=119.62 Aligned_cols=116 Identities=14% Similarity=0.114 Sum_probs=90.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+.+|||+|||+|.+++.+|+..+. +++|+|++..+ .++++.+++.| ++|+++|+.++. .+++||.|++
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~------~~~~fD~Vi~ 198 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------GENIADRILM 198 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------CCSCEEEEEE
T ss_pred CCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc------ccCCccEEEE
Confidence 689999999999999999998765 89999975544 44555568776 999999998872 2678999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc------HHHHHHHHHHHHhCCCCce
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI------EEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~------~~~~~~~~~~~~~~~~~~~ 365 (416)
+.|... ..+++++.++|+|||.+++.+.. .+..+.+.+.+++.++...
T Consensus 199 ~~p~~~------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 199 GYVVRT------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp CCCSSG------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred CCchhH------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeE
Confidence 643111 26889999999999999996543 3456667778888887643
No 97
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.28 E-value=1.9e-11 Score=120.78 Aligned_cols=110 Identities=17% Similarity=0.175 Sum_probs=85.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------CC--CcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------GI--TNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~l--~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|.++..+++..|..+++++|++..+++.++++ ++ ++++++++|+.+.++. + .+++||
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~-~--~~~~fD 196 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN-A--AEGSYD 196 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT-S--CTTCEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh-c--cCCCcc
Confidence 46799999999999999999988889999999866655544432 33 5899999999886432 1 357899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+|+++.++|+... ..+....+++.+.++|+|||.|++.++.
T Consensus 197 lIi~d~~~p~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 197 AVIVDSSDPIGPA----KELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEEECCCCTTSGG----GGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEECCCCccCcc----hhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9999877777321 1244579999999999999999997544
No 98
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.28 E-value=1e-11 Score=116.64 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=80.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh---CCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS---GITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~---~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.++++ ...|++++++|+.++ ++++++||.|+++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~~ 111 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI-----PLPDESVHGVIVV 111 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC-----CSCTTCEEEEEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC-----CCCCCCeeEEEEC
Confidence 3679999999999999999987 57999999877776665543 357899999999876 3357899999998
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+.-.|..+ ...+++++.++|||||.+++.
T Consensus 112 ~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 112 HLWHLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CchhhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 76555432 148899999999999999886
No 99
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.27 E-value=1.7e-11 Score=117.93 Aligned_cols=101 Identities=13% Similarity=0.051 Sum_probs=79.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++.+ +.+++|+|++..+ .+++...++ .+++++++|+.++ |+++++||.|+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 155 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-----PCEDNSYDFIW 155 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-----SSCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-----CCCCCCEeEEE
Confidence 46799999999999999999986 4699999975544 444445566 4799999999876 44678999999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+...-.+... ...+|++++++|||||.+++.+
T Consensus 156 ~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 156 SQDAFLHSPD--------KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEE
Confidence 8854433222 1489999999999999999874
No 100
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.26 E-value=6.6e-12 Score=114.60 Aligned_cols=121 Identities=9% Similarity=0.006 Sum_probs=90.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+.+|||||||+|.++..+++. ..+++|+|++..+++.++++- ++.++++|+..+ + .+++||.|+++..-.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~--~~~~~~~d~~~~-----~-~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL--GRPVRTMLFHQL-----D-AIDAYDAVWAHACLL 113 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--TSCCEECCGGGC-----C-CCSCEEEEEECSCGG
T ss_pred CCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc--CCceEEeeeccC-----C-CCCcEEEEEecCchh
Confidence 679999999999999999987 569999999877777665432 577889998876 3 478999999875433
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH--------------HHHHHHHHHHhCC-CCceee
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE--------------VMLRMKQQFLEYG-KGKLVL 367 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~--------------~~~~~~~~~~~~~-~~~~~~ 367 (416)
+... -....++++++++|||||.+++.+.... -.+.+.+.+++.| |.....
T Consensus 114 ~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 114 HVPR------DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp GSCH------HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred hcCH------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 2210 0124889999999999999999743211 2455677788888 875443
No 101
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.26 E-value=3.1e-11 Score=121.09 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=85.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCC---cEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGIT---NGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~---nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
+.+|||+|||+|.+++.+++.+|..+++|+|++.. |.++++.+++. +++|+++|+.+. + ++++||.|
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~----~--~~~~fD~I 296 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG----V--EPFRFNAV 296 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT----C--CTTCEEEE
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc----C--CCCCeeEE
Confidence 47999999999999999999999999999997554 44555556654 699999998764 2 46799999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC-cHHHHHHHHHHHH
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFL 358 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD-~~~~~~~~~~~~~ 358 (416)
+++. |++.... ..+.....+++++.++|||||++++... ...|...+.+.+.
T Consensus 297 i~np--pfh~~~~-~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 297 LCNP--PFHQQHA-LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp EECC--CC--------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred EECC--CcccCcc-cCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 9983 4432111 1111234789999999999999999753 3345555555543
No 102
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.26 E-value=1.5e-11 Score=111.82 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=78.4
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.++..+++.+|+.+++|+|++..+. +++...+++|++++++|+.++ + ++++||.|+++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF-----P-SEPPFDGVISR 139 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS-----C-CCSCEEEEECS
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC-----C-ccCCcCEEEEe
Confidence 5789999999999999999999999999999755544 444556788899999999876 2 35789999875
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
...+ ...+++.+.++|+|||.+++...
T Consensus 140 ~~~~------------~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 140 AFAS------------LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSSS------------HHHHHHHHTTSEEEEEEEEEEES
T ss_pred ccCC------------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 2211 14889999999999999999753
No 103
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.26 E-value=8.6e-12 Score=120.98 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=78.7
Q ss_pred CCCeEEEEeccccHHHHHHH-HhCCCCeEEEEchHHHHHHHH----HHhCCC-cEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMA-RKRKDLNFLGLELVTHCRDSL----QLSGIT-NGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA-~~~p~~~~iGvD~~~~a~~~a----~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||||||+|.++..+| ...|+.+++|+|++..+++.+ ...++. +++|+++|+.++ +++ ++||.|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~-~~fD~v 191 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL-----DTR-EGYDLL 191 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC-----CCC-SCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC-----Ccc-CCeEEE
Confidence 36899999999999999997 568899999999765554444 344555 499999999886 334 899999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+++.+-.+..... ....++++++++|||||.+++.+
T Consensus 192 ~~~~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDDA-----RVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCHH-----HHHHHHHHHHHhcCCCeEEEEEe
Confidence 9865433322211 12368999999999999999864
No 104
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.26 E-value=4.5e-11 Score=114.81 Aligned_cols=123 Identities=10% Similarity=0.121 Sum_probs=93.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------CC--CcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------GI--TNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~l--~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|..+..+++..|..+++++|++..+++.++++ ++ ++++++.+|+.+.++. .+++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~----~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK----SENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT----CCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh----CCCCee
Confidence 46899999999999999999877788999999866655554432 23 5799999999886432 357899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
.|++..++|+.... .+...++++.++++|+|||.+++.+.. .+....+.+.+++.
T Consensus 151 ~Ii~d~~~~~~~~~----~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 151 VIMVDSTEPVGPAV----NLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp EEEESCSSCCSCCC----CCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCcch----hhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh
Confidence 99998877763221 233458999999999999999998643 34455666667665
No 105
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.26 E-value=3.3e-11 Score=110.28 Aligned_cols=102 Identities=19% Similarity=0.234 Sum_probs=79.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.+++. .++.+.++|+.++....++ ...+||.|++++.-
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~-~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA--GAGEVHLASYAQLAEAKVP-VGKDYDLICANFAL 126 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT--CSSCEEECCHHHHHTTCSC-CCCCEEEEEEESCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh--cccccchhhHHhhcccccc-cCCCccEEEECchh
Confidence 3589999999999999999988 66999999988888877665 6788999999886322121 34559999988543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
. +.. ...++++++++|||||.+++.+.
T Consensus 127 ~-~~~--------~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 127 L-HQD--------IIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp C-SSC--------CHHHHHHHHHTEEEEEEEEEEEC
T ss_pred h-hhh--------HHHHHHHHHHHhCCCeEEEEEec
Confidence 3 111 13899999999999999999764
No 106
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=2.3e-11 Score=108.43 Aligned_cols=124 Identities=12% Similarity=0.101 Sum_probs=91.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.++++ .+|+.++++|+.++ +++++++|.|+++.+-
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~d~~~~-----~~~~~~~D~i~~~~~~ 117 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQD-FPEARWVVGDLSVD-----QISETDFDLIVSAGNV 117 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHH-CTTSEEEECCTTTS-----CCCCCCEEEEEECCCC
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHh-CCCCcEEEcccccC-----CCCCCceeEEEECCcH
Confidence 4689999999999999999987 57999999988777776544 36799999999875 3356889999886221
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH--HHHHHHHHHHhCCCCcee
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE--VMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~--~~~~~~~~~~~~~~~~~~ 366 (416)
-++.... ....+++++.++|+|||.+++.+.... ..+.+.+.+++.|+....
T Consensus 118 ~~~~~~~-----~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 118 MGFLAED-----GREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp GGGSCHH-----HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEE
T ss_pred HhhcChH-----HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEee
Confidence 1111100 124889999999999999999754322 245677788888876443
No 107
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.25 E-value=3e-11 Score=117.53 Aligned_cols=100 Identities=16% Similarity=0.085 Sum_probs=80.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++++ ..+++|+|++.. |.+++...++. |++|+++|+.++ ++++++||.|+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~V~ 190 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-----PFDKGAVTASW 190 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----CCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-----CCCCCCEeEEE
Confidence 46899999999999999999986 579999997544 44455556765 799999999876 34578999999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++..-.+.. ...+++++.++|||||++++.+
T Consensus 191 ~~~~l~~~~---------~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYVD---------LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGSC---------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhCC---------HHHHHHHHHHHcCCCcEEEEEE
Confidence 875444321 2589999999999999999875
No 108
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.25 E-value=3.5e-11 Score=116.28 Aligned_cols=106 Identities=13% Similarity=0.106 Sum_probs=78.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+|+.++ .+++|+|++..+ .+++...++. |++++++|+.++ +++||.|+
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------~~~fD~v~ 142 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--------DEPVDRIV 142 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--------CCCCSEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--------CCCccEEE
Confidence 467999999999999999999977 899999975544 4444555766 899999998764 57899998
Q ss_pred EECCCCCCCCcchh-hhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHR-WRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~k-rRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++..-.+..++... .+-..+.+++++.++|||||.+++.+
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 86432222111000 00112589999999999999999864
No 109
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.25 E-value=4e-11 Score=117.82 Aligned_cols=123 Identities=11% Similarity=0.111 Sum_probs=93.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------C--CCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------G--ITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~--l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|..+..+++..|..+++++|++..+++.++++ + .++++++++|+.+.++. .+++||
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~fD 191 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----VTNTYD 191 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH----CCSCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh----cCCCce
Confidence 46799999999999999999887889999999877766665442 1 25799999999876431 367899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
.|+++.++|+.. ...+...++++.+.++|+|||.+++.+.+ .+....+.+.+++.
T Consensus 192 vIi~d~~~p~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 192 VIIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 250 (321)
T ss_dssp EEEEECCCSSSG----GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT
T ss_pred EEEECCcCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 999998888731 12344469999999999999999997543 23445555666654
No 110
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.25 E-value=1.7e-11 Score=118.93 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=85.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----Hh-----CCCcEEEEEcChhhhhhhhhccCCCce
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LS-----GITNGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~-----~l~nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
+..+|||||||+|..+..+++..|..+++++|++..+++.++ .. .-+|++++.+|+.+.+.. .+++|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~----~~~~f 158 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ----TSQTF 158 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C----CCCCE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh----cCCCc
Confidence 468999999999999999999878889999997544443332 22 235899999999876431 36789
Q ss_pred eEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 301 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
|.|++..++|+... ..+...+|++.+.++|+|||.+.+.+.. .+.+..+.+.+++.
T Consensus 159 DvIi~D~~~p~~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~ 218 (294)
T 3adn_A 159 DVIISDCTDPIGPG----ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY 218 (294)
T ss_dssp EEEEECC--------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred cEEEECCCCccCcc----hhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH
Confidence 99999888887322 2344568999999999999999997532 23455566666654
No 111
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.25 E-value=3.9e-11 Score=111.95 Aligned_cols=111 Identities=16% Similarity=0.218 Sum_probs=89.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHH----HHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDS----LQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~----a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.++..+++. ..+++++|++..+++. ....++ +|+.++.+|+.+.. + .++++|.|+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~--~~~~~D~v~ 163 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE---V--PEGIFHAAF 163 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC---C--CTTCBSEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc---c--CCCcccEEE
Confidence 3679999999999999999998 6799999976554444 444566 68999999987651 1 356899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
++.|+|| .+++++.++|+|||.+++.+........+.+.+.+.
T Consensus 164 ~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 164 VDVREPW-------------HYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp ECSSCGG-------------GGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred ECCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 9766664 678999999999999999998777777777777665
No 112
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.25 E-value=1.5e-11 Score=108.24 Aligned_cols=95 Identities=13% Similarity=0.253 Sum_probs=78.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++... +++|+|++..+++.+++. .+|++++++| + ++++++||.|+++..-
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-~~~v~~~~~d---~-----~~~~~~~D~v~~~~~l 85 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK-FDSVITLSDP---K-----EIPDNSVDFILFANSF 85 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-CTTSEEESSG---G-----GSCTTCEEEEEEESCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-CCCcEEEeCC---C-----CCCCCceEEEEEccch
Confidence 467999999999999999999873 999999988887777665 6789999999 2 2357899999998655
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+..+ ...+++++.++|||||.+++.
T Consensus 86 ~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 86 HDMDD--------KQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp TTCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcccC--------HHHHHHHHHHhcCCCCEEEEE
Confidence 54322 148899999999999999986
No 113
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.25 E-value=1.3e-11 Score=111.64 Aligned_cols=120 Identities=14% Similarity=0.193 Sum_probs=82.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCC--CCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhh-------------------
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK--DLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTF------------------- 289 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p--~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~------------------- 289 (416)
+.+|||||||+|.++..+++++| ..+++|+|++.. ...+|++++++|+.+..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~-------~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM-------DPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC-------CCCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc-------CCCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 57899999999999999999988 689999998762 23568999999997651
Q ss_pred ---hhhhccCCCceeEEEEECCCCCCCC---cchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHh
Q 014919 290 ---RSIVASYPGKLILVSIQCPNPDFNR---PEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLE 359 (416)
Q Consensus 290 ---~~~~~~~~~s~D~v~~~fpdpw~k~---~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~ 359 (416)
...+ ++++||.|+++.+.+|... .+.+..-....+++++.++|||||.|++.+-.......+.+.+..
T Consensus 96 ~~~~~~~--~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~ 169 (201)
T 2plw_A 96 YKLKEIL--QDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG 169 (201)
T ss_dssp HHHHHHH--TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT
T ss_pred HHHHhhc--CCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH
Confidence 0012 4578999998765444311 111100112358899999999999999864322223344555554
No 114
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.24 E-value=2e-11 Score=111.68 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=81.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
...+|||||||+|.++..+++.. .+++|+|++..+++.++++ ...|++++++|+.++ + ++++||.|+++.
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-----~-~~~~fD~v~~~~ 122 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQF-----S-TAELFDLIVVAE 122 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTC-----C-CSCCEEEEEEES
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhC-----C-CCCCccEEEEcc
Confidence 35789999999999999999885 5899999887777766543 234899999999886 2 478999999986
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
.-.|...... ...+++++.++|||||.+++.+...
T Consensus 123 ~l~~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 123 VLYYLEDMTQ-----MRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CGGGSSSHHH-----HHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHhCCCHHH-----HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 5444332211 1378999999999999999976443
No 115
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=1e-11 Score=117.71 Aligned_cols=97 Identities=16% Similarity=0.200 Sum_probs=77.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++ |..+++|+|++..+++.++... |++|+++|+.++ ++++++||.|++.+.-
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~d~~~~-----~~~~~~fD~v~~~~~l 104 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP--QVEWFTGYAENL-----ALPDKSVDGVISILAI 104 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT--TEEEECCCTTSC-----CSCTTCBSEEEEESCG
T ss_pred CCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc--CCEEEECchhhC-----CCCCCCEeEEEEcchH
Confidence 468999999999999999997 6789999999887777554332 999999999876 4457899999988654
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.+..+ .+.++++++++|| ||.+++.+
T Consensus 105 ~~~~~--------~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 105 HHFSH--------LEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp GGCSS--------HHHHHHHHHHHBC-SSCEEEEE
T ss_pred hhccC--------HHHHHHHHHHHhC-CcEEEEEE
Confidence 33211 1489999999999 99777754
No 116
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.24 E-value=7e-11 Score=115.61 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=92.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH------hC---CCcEEEEEcChhhhhhhhhccCCCce
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL------SG---ITNGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~------~~---l~nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
+..+|||||||+|.++..+++..|..+++++|++..+++.+++ .+ .++++++++|+.+.++. .+++|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~f 152 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER----TEERY 152 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH----CCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh----cCCCc
Confidence 4689999999999999999998788899999986555544432 12 36899999999886432 36789
Q ss_pred eEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc-----HHHHHHHHHHHHhC
Q 014919 301 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-----EEVMLRMKQQFLEY 360 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~-----~~~~~~~~~~~~~~ 360 (416)
|.|++..++|+.. .....++...++++.++++|+|||.+++.+.. .+....+.+.+++.
T Consensus 153 D~Ii~d~~~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~ 216 (314)
T 1uir_A 153 DVVIIDLTDPVGE-DNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA 216 (314)
T ss_dssp EEEEEECCCCBST-TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT
T ss_pred cEEEECCCCcccc-cCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH
Confidence 9999998887610 01122344579999999999999999987422 23455566666654
No 117
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.24 E-value=1.7e-11 Score=113.94 Aligned_cols=123 Identities=11% Similarity=0.065 Sum_probs=89.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-----CCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-----GITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-----~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
..+|||||||+|.++..+++ +..+++|+|++..+++.+++. ...|++|+++|+.++ + ++++||.|++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~fD~v~~ 138 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTW-----R-PTELFDLIFD 138 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTC-----C-CSSCEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcC-----C-CCCCeeEEEE
Confidence 45999999999999999986 577999999877666655432 235799999999876 2 3569999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH----------HHHHHHHHHHHhCCCCceee
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----------EVMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~----------~~~~~~~~~~~~~~~~~~~~ 367 (416)
+....+.... ....+++++.++|||||.+++..-.. .-.+++.+.+++.||.....
T Consensus 139 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 139 YVFFCAIEPE------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp ESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred ChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 8655543211 12489999999999999998853210 11355677888888875443
No 118
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.24 E-value=4.3e-11 Score=104.82 Aligned_cols=103 Identities=14% Similarity=0.136 Sum_probs=75.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+..|||+|||+|.++..+++..+. ++|+|++..+ .+++...++ |++++++|+.+.++.. +..+++||.|+++
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~-~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEA-KAQGERFTVAFMA 117 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHH-HHTTCCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhh-hccCCceEEEEEC
Confidence 678999999999999999998664 9999975544 444445666 8999999998853322 1123589999987
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHH--hhccCCcEEEEEeCcH
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVS--DLLVHDGKVFLQSDIE 347 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~--r~LkpgG~l~l~tD~~ 347 (416)
. |++ .+. +.+++.+. ++|+|||.+++.+...
T Consensus 118 ~--~~~--~~~------~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 P--PYA--MDL------AALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp C--CTT--SCT------THHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred C--CCc--hhH------HHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 3 343 111 25566666 9999999999987543
No 119
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.24 E-value=4.8e-11 Score=116.35 Aligned_cols=122 Identities=13% Similarity=0.135 Sum_probs=85.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------C--CCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------G--ITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~--l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|.++..+++..|..+++++|++..+++.++++ + .++++++++|+.+.++. .+++||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~----~~~~fD 170 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ----NQDAFD 170 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT----CSSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh----CCCCce
Confidence 46899999999999999999988889999999866555444321 2 36899999999886432 367899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHh
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLE 359 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~ 359 (416)
.|++..++|+.... .+...++++++.++|+|||.+++.+.. ......+.+.+++
T Consensus 171 ~Ii~d~~~~~~~~~----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 228 (304)
T 2o07_A 171 VIITDSSDPMGPAE----SLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQS 228 (304)
T ss_dssp EEEEECC---------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcch----hhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHH
Confidence 99999888763221 123458999999999999999987522 2334445444444
No 120
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.24 E-value=5.9e-11 Score=114.27 Aligned_cols=121 Identities=11% Similarity=0.075 Sum_probs=89.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-----C---------CCcEEEEEcChhhhhhhhhcc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-----G---------ITNGYFIATNATSTFRSIVAS 295 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-----~---------l~nv~f~~~Da~~l~~~~~~~ 295 (416)
++.+|||||||+|.++..+++. |..+++++|++..+++.++++ + .++++++++|+.+.+..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~---- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN---- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH----
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc----
Confidence 4679999999999999999998 888999999866655554432 2 35799999999876431
Q ss_pred CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 296 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 296 ~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
+++||.|++..++|+... ..+...++++.++++|+|||.+++.+.. .+....+.+.+++.
T Consensus 150 -~~~fD~Ii~d~~~~~~~~----~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 213 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPA----KVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV 213 (281)
T ss_dssp -CCCEEEEEEECCCCC---------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH
T ss_pred -cCCeeEEEECCCCCCCcc----hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 578999999988876321 1233568999999999999999997532 34455555555554
No 121
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=4.8e-11 Score=116.77 Aligned_cols=122 Identities=10% Similarity=-0.043 Sum_probs=91.8
Q ss_pred CeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh----CCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS----GITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~----~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+|||||||+|.++..+++.+|+.++++||+...+++.++++ .-++++++++|+.+++.. + .+++||.|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~-~--~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES-F--TPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT-C--CTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh-c--cCCCCCEEEECC
Confidence 389999999999999999999999999999877766666543 235799999999987542 1 367899999987
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc-H--HHHHHHHHHHHhC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-E--EVMLRMKQQFLEY 360 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~-~--~~~~~~~~~~~~~ 360 (416)
.+|+.... .+...+|++.++++|+|||.|.+.+-. . .++..+.+.+.+.
T Consensus 168 ~~~~~~~~----~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v 219 (317)
T 3gjy_A 168 FAGAITPQ----NFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV 219 (317)
T ss_dssp STTSCCCG----GGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCccccch----hhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH
Confidence 67753221 245579999999999999999987531 1 2334455555553
No 122
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.24 E-value=2.3e-11 Score=110.89 Aligned_cols=98 Identities=9% Similarity=0.082 Sum_probs=78.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCC-eEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDL-NFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~-~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+.+|||||||+|.++..+ .. +++|+|++..+++.++++. .++.++++|+.++ ++++++||.|+++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~d~~~~-----~~~~~~fD~v~~~~~ 104 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-PEATWVRAWGEAL-----PFPGESFDVVLLFTT 104 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-TTSEEECCCTTSC-----CSCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-CCcEEEEcccccC-----CCCCCcEEEEEEcCh
Confidence 4689999999999998877 34 8999999888877776554 7899999999876 435789999998865
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
..+..+. ..+++++.++|||||.+++.+.+
T Consensus 105 l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 105 LEFVEDV--------ERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp TTTCSCH--------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhcCCH--------HHHHHHHHHHcCCCCEEEEEecC
Confidence 5543221 48899999999999999997543
No 123
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.24 E-value=5.1e-11 Score=109.74 Aligned_cols=102 Identities=17% Similarity=0.200 Sum_probs=77.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHHH----HHHHHHHhCCCc-EEEEEcChhhhhhhhhc-cCCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVTH----CRDSLQLSGITN-GYFIATNATSTFRSIVA-SYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~----a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~-~~~~s~D~v 303 (416)
+.+|||||||+|.++..+|+..| +.+++|+|++.. |.++++..++.+ ++++++|+.+.++.... ...++||.|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 57999999999999999999987 899999997544 445555667764 99999999876443210 001789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++. ++. . ....+++.+.++|+|||.|++.
T Consensus 145 ~~~---~~~--~------~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 145 YID---ADK--A------NTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEC---SCG--G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEC---CCH--H------HHHHHHHHHHHhcCCCcEEEEe
Confidence 864 331 1 1247899999999999999884
No 124
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.23 E-value=2.3e-11 Score=115.35 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=83.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++..|..+++|+|++..+++.+++.. .++.+..+|+.++ ++.+++||.|+++++
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~d~~~~-----~~~~~~fD~v~~~~~- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-PQVTFCVASSHRL-----PFSDTSMDAIIRIYA- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-TTSEEEECCTTSC-----SBCTTCEEEEEEESC-
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-CCcEEEEcchhhC-----CCCCCceeEEEEeCC-
Confidence 468999999999999999999988899999999888888776554 6799999999876 335789999998754
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHH
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVML 351 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~ 351 (416)
+ .+++++.++|||||.+++.+.......
T Consensus 158 ~--------------~~l~~~~~~L~pgG~l~~~~~~~~~~~ 185 (269)
T 1p91_A 158 P--------------CKAEELARVVKPGGWVITATPGPRHLM 185 (269)
T ss_dssp C--------------CCHHHHHHHEEEEEEEEEEEECTTTTH
T ss_pred h--------------hhHHHHHHhcCCCcEEEEEEcCHHHHH
Confidence 1 357899999999999999876554433
No 125
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.23 E-value=5e-11 Score=112.97 Aligned_cols=118 Identities=16% Similarity=0.267 Sum_probs=91.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchH----HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV----THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~----~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.+++.+++..+ +++|+|++ ..|.+++..+++. +++.++|+.+. + ++++||.|++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~----~--~~~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA----L--PFGPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH----G--GGCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc----C--cCCCCCEEEE
Confidence 368999999999999999998755 99999964 4555566666766 99999998764 2 2568999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCceee
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~~ 367 (416)
+.+. |+ ...+++.+.++|+|||.+++........+.+.+.++++|+.....
T Consensus 191 n~~~------~~-----~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 191 NLYA------EL-----HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp ECCH------HH-----HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCcH------HH-----HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 8431 11 248899999999999999997655556777888899999875443
No 126
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.23 E-value=2.9e-11 Score=116.08 Aligned_cols=103 Identities=13% Similarity=0.112 Sum_probs=79.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC-CeEEEEchHHHHHHHHHHh--C-CCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVTHCRDSLQLS--G-ITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~~a~~~a~~~--~-l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++.+|. .+++|+|++..+.+.+++. . ..|++|+++|+.++ ++ +++||.|++
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-----~~-~~~fD~v~~ 95 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-----EL-NDKYDIAIC 95 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC-----CC-SSCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc-----Cc-CCCeeEEEE
Confidence 4689999999999999999999985 8999999866555544332 1 23899999999876 32 569999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+..-.+..+ .+.++++++++|||||.+++....
T Consensus 96 ~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 96 HAFLLHMTT--------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ESCGGGCSS--------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CChhhcCCC--------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 864333221 148999999999999999986543
No 127
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.23 E-value=3.4e-11 Score=115.42 Aligned_cols=113 Identities=15% Similarity=0.207 Sum_probs=86.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.+++.+|+..+..+++|+|++.. |.++++.++++|+.|+++|+.++ + ..+++|.|++
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~-----~~~~~D~Vi~ 192 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-E-----LKDVADRVIM 192 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-C-----CTTCEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-C-----ccCCceEEEE
Confidence 368999999999999999999988889999997554 44555667889999999999876 2 2568999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH-----HHHHHHHHHHHhC
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE-----EVMLRMKQQFLEY 360 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~-----~~~~~~~~~~~~~ 360 (416)
+.|. . ...++..+.+.|+|||.+++.+... +......+.+.+.
T Consensus 193 d~p~----~--------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T 3a27_A 193 GYVH----K--------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEK 240 (272)
T ss_dssp CCCS----S--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHH
T ss_pred CCcc----c--------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHH
Confidence 7442 1 1267899999999999999875432 3444555555553
No 128
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.23 E-value=3.6e-11 Score=110.44 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=76.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.++..+++..+ +++|+|++..+++.+ ...+ .|++++++|+.++ +++++++|.|+++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~-----~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKL-----SFEDKTFDYVIFI 110 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSC-----CSCTTCEEEEEEE
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcC-----CCCCCcEEEEEEc
Confidence 67999999999999999999876 899999765554443 3334 7899999999875 3356799999988
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
.+..++... ....++++++++|+|||.+++.+.
T Consensus 111 ~~~~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 111 DSIVHFEPL------ELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp SCGGGCCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CchHhCCHH------HHHHHHHHHHHHcCCCcEEEEEec
Confidence 431121111 124789999999999999988754
No 129
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.23 E-value=1.9e-11 Score=106.99 Aligned_cols=122 Identities=14% Similarity=0.097 Sum_probs=87.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhh-----hhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTF-----RSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~-----~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+++.+ |+.+++|+|++. +. ...+++++++|+.+.. +..+ ++++||.|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~------~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~D~i 92 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD------PIVGVDFLQGDFRDELVMKALLERV--GDSKVQVV 92 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC------CCTTEEEEESCTTSHHHHHHHHHHH--TTCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc------ccCcEEEEEcccccchhhhhhhccC--CCCceeEE
Confidence 36799999999999999999984 778999999876 32 2378999999998751 1113 46799999
Q ss_pred EEECCCCCCCCcchhh---hhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 304 SIQCPNPDFNRPEHRW---RMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 304 ~~~fpdpw~k~~h~kr---Rl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
+++.+..|....+... .-....+++++.++|+|||.+++.+........+.+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 152 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL 152 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh
Confidence 9986655543321110 01125889999999999999999754444445556666553
No 130
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.22 E-value=7.9e-11 Score=113.55 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=93.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--------CCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--------GITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--------~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
++.+|||||||+|..+..+++..|..+++++|++..+++.++++ ..+|++++++|+.+.++. .+++||
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~fD 153 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----VTNTYD 153 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH----CCSCEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh----CCCCce
Confidence 46899999999999999999887889999999877666655432 136899999999886432 367899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
.|++..++|+.. ...+...++++.++++|+|||.+.+.+.+ ......+.+.+++.
T Consensus 154 ~Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 212 (283)
T 2i7c_A 154 VIIVDSSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 212 (283)
T ss_dssp EEEEECCCTTTG----GGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH
Confidence 999988888632 22344579999999999999999998542 23445555556554
No 131
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.21 E-value=4e-11 Score=106.77 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=76.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..|||+|||+|.++..+++. +..+++|+|++..+ .+++...++ +|++++++|+.+.++. ++..+++||.|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~fD~i~ 121 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ-FYEEKLQFDLVL 121 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH-HHHTTCCEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH-HHhcCCCCCEEE
Confidence 3679999999999999998874 56799999975544 444555666 4899999999886432 122367899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHH--HhhccCCcEEEEEeCc
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAV--SDLLVHDGKVFLQSDI 346 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i--~r~LkpgG~l~l~tD~ 346 (416)
++.| +... ..+..++.+ .++|+|||.+++.+..
T Consensus 122 ~~~~--~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 122 LDPP--YAKQ-------EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp ECCC--GGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ECCC--CCch-------hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 8633 3211 123566666 8899999999997654
No 132
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.21 E-value=3.2e-11 Score=116.45 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=77.8
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCC---CcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGI---TNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l---~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
..+|||||||+|.++..+++. ..+++|+|++..+++.++ ..++ .|++|+++|+.++ + .+++||.|
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~fD~v 154 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-----A-LDKRFGTV 154 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-----C-CSCCEEEE
T ss_pred CCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-----C-cCCCcCEE
Confidence 459999999999999999988 578999998665555443 3332 6899999999886 3 26899988
Q ss_pred EEECC-CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 304 SIQCP-NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 304 ~~~fp-dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
++.+. -.|.. . -....+|++++++|||||.|++.+.+...
T Consensus 155 ~~~~~~~~~~~-~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 155 VISSGSINELD-E-----ADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp EECHHHHTTSC-H-----HHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred EECCcccccCC-H-----HHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 75421 11211 1 01248999999999999999998766544
No 133
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.21 E-value=5.8e-11 Score=113.63 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=77.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++. +.+++|+|++..++ +++...++ |++++++|+.++ + .+++||.|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-----~-~~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAA-----N-IQENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGC-----C-CCSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccc-----c-ccCCccEEEE
Confidence 3689999999999999999998 56999999765544 44445566 899999999876 3 2688999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.+-.|.... ....+++++.++|+|||.+++.+
T Consensus 191 ~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRE------RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 7544332111 12489999999999999988764
No 134
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.20 E-value=5.4e-11 Score=108.56 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=76.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCC--CcEEEEEcChhhhhhhhhccCCCc-eeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGI--TNGYFIATNATSTFRSIVASYPGK-LILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l--~nv~f~~~Da~~l~~~~~~~~~~s-~D~v 303 (416)
+.+|||+|||+|.+++.++++. ..+++|+|++.. |.++++..++ +|++++++|+.+++.. ..+++ ||.|
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~~~fD~I 129 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ---PQNQPHFDVV 129 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS---CCSSCCEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh---hccCCCCCEE
Confidence 5789999999999999877764 358999997554 4445555677 6999999999876321 12578 9999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHH--HhhccCCcEEEEEeCcH
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAV--SDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i--~r~LkpgG~l~l~tD~~ 347 (416)
+++.| +. .. ..+.+++.+ .++|+|||.+++.+...
T Consensus 130 ~~~~~--~~-~~------~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 130 FLDPP--FH-FN------LAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EECCC--SS-SC------HHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EECCC--CC-Cc------cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 98633 32 11 124677888 67899999999987543
No 135
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=6.5e-11 Score=110.47 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=79.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-CCCcEEEEEcChhhhhhh-hhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-GITNGYFIATNATSTFRS-IVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-~l~nv~f~~~Da~~l~~~-~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+|+..+ +++|+|++..+++.++++ ...|++|+++|+.++... .++ ...++|.|+++.
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIH-SEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHH-HHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccc-cccCccEEEEcc
Confidence 357899999999999999999977 899999988877776544 345899999999886211 111 012489999886
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.-.+..... ...++++++++|||||.+++..
T Consensus 133 ~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIPVEK------RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSCGGG------HHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCCHHH------HHHHHHHHHHHcCCCCEEEEEe
Confidence 555432111 2489999999999999987753
No 136
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.20 E-value=7.3e-11 Score=109.07 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=76.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHH--hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQL--SGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~--~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+.+|||+|||+|.++..+|+.. |..+++|+|++..+++.+.+ ...+|++++++|+.+.. ...+ .+++||.|++.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~-~~~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE-EYRA-LVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG-GGTT-TCCCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc-hhhc-ccCCceEEEEC
Confidence 36799999999999999999885 66899999987755444322 12378999999998741 1111 24689999987
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.+.|+ ....+++++.++|||||.+++..
T Consensus 151 ~~~~~----------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 151 VAQPT----------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CCSTT----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCHh----------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 65443 11256999999999999998863
No 137
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.19 E-value=3.6e-11 Score=113.21 Aligned_cols=102 Identities=14% Similarity=0.113 Sum_probs=79.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchH----HHHHHHHHHhCCC-cEEEEEcChhhhhhhhhcc-CCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELV----THCRDSLQLSGIT-NGYFIATNATSTFRSIVAS-YPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~----~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~-~~~s~D~v 303 (416)
..+|||||||+|..++.||+..| +.+++|+|++ ..|.++++..++. |++++++|+.+.++...+. .+++||.|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 57999999999999999999886 8899999964 4566777777875 8999999998875432100 14789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++..+ . . ....+++++.++|+|||.|++.
T Consensus 141 ~~d~~---~--~------~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 141 FIDAD---K--T------NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEESC---G--G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCC---h--H------HhHHHHHHHHHhcCCCeEEEEE
Confidence 88632 1 1 1247899999999999999983
No 138
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.19 E-value=7.1e-11 Score=114.98 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=77.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCCC------cEEEEEcCh------hhhhhhhh
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGIT------NGYFIATNA------TSTFRSIV 293 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l~------nv~f~~~Da------~~l~~~~~ 293 (416)
.+.+|||||||+|..+..+++. ...+++|+|++..+++.|+ ..+.. ++.|.+.|+ .++ ++.+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l-~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSV-REVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHH-HTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhh-hccc
Confidence 3678999999999877777664 3568999998665555443 33432 367888887 333 2222
Q ss_pred ccCCCceeEEEEECCCCCC-CCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 294 ASYPGKLILVSIQCPNPDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 294 ~~~~~s~D~v~~~fpdpw~-k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
++++||.|++.+.-.|. ...|. ..+|++++++|||||.|++.|.+...
T Consensus 126 --~~~~FD~V~~~~~lhy~~~~~~~------~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 126 --YFGKFNIIDWQFAIHYSFHPRHY------ATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp --CSSCEEEEEEESCGGGTCSTTTH------HHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred --cCCCeeEEEECchHHHhCCHHHH------HHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 46899999988754432 11221 48999999999999999998866543
No 139
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.19 E-value=8e-11 Score=109.13 Aligned_cols=104 Identities=13% Similarity=0.132 Sum_probs=77.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.+ ...+. ++.++++|+.++ ++ +++||.|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-----~~-~~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNL-----NI-NRKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGC-----CC-SCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccC-----Cc-cCCceEEEE
Confidence 3679999999999999999988 46899999765554443 33344 899999999876 32 378999998
Q ss_pred EC-CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 306 QC-PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 306 ~f-pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
++ .-++..... ....+|++++++|+|||.+++.+.+.
T Consensus 108 ~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 108 CLDSTNYIIDSD-----DLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CTTGGGGCCSHH-----HHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cCccccccCCHH-----HHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 75 434332111 12488999999999999999866543
No 140
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.19 E-value=2.7e-11 Score=116.14 Aligned_cols=115 Identities=7% Similarity=0.048 Sum_probs=81.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--------CCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--------GITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--------~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.++++ ...++.+..+|+..+..+++ .+++||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP--AGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC--CTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc--cCCCeE
Confidence 3679999999999999999998 44999999876666555331 23578999999988732222 578999
Q ss_pred EEEEE-CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 302 LVSIQ-CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 302 ~v~~~-fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
.|+++ ..-.+....... .-....++++++++|||||.+++.+.+.++
T Consensus 133 ~V~~~g~~l~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGD-QSEHRLALKNIASMVRPGGLLVIDHRNYDY 180 (293)
T ss_dssp EEEECTTCGGGSCCSSSS-SHHHHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred EEEEcChHHhhcCccccC-HHHHHHHHHHHHHHcCCCeEEEEEeCCHHH
Confidence 99986 332222220000 001248999999999999999998766443
No 141
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.19 E-value=1.2e-10 Score=108.06 Aligned_cols=100 Identities=12% Similarity=0.163 Sum_probs=78.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+.+|||||||+|.++..+|+..|+.+++|+|++.. |.+++...++. ++.++++|+.+.++... .+++||.|++
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~~fD~I~~ 132 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE--LYPLFDVLFI 132 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT--TSCCEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc--cCCCccEEEE
Confidence 57999999999999999999999999999997544 44444555774 69999999987533211 2578999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..+.+ ....+++.+.++|+|||.+++.
T Consensus 133 ~~~~~-----------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 133 DAAKG-----------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EGGGS-----------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCHH-----------HHHHHHHHHHHHcCCCeEEEEE
Confidence 75422 1248899999999999999885
No 142
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.19 E-value=3.2e-11 Score=111.39 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=81.3
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCC-cEEEEEcChhhhhhhhh-ccCCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGIT-NGYFIATNATSTFRSIV-ASYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~-~~~~~s~D~v 303 (416)
..+|||||||+|.+++.+|+..+ +.+++|+|++. .|.++++..++. +++++++|+.+.++..- ....++||.|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 57899999999999999999764 88999999754 455555566775 59999999987643211 0012689999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCC
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~ 362 (416)
++..+.. +. .....+++.+ ++|||||.|++..-...-.....+.+.+++.
T Consensus 139 ~~d~~~~-----~~---~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~ 188 (221)
T 3u81_A 139 FLDHWKD-----RY---LPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSS 188 (221)
T ss_dssp EECSCGG-----GH---HHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTT
T ss_pred EEcCCcc-----cc---hHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCC
Confidence 8752211 11 0112567777 9999999998742111111234455556554
No 143
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.19 E-value=5.9e-11 Score=105.21 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=76.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.++..+++. +..+++|+|++..+++ +++..++. |++++++|+.+.++. .+++||.|+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~fD~i~ 105 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC----LTGRFDLVF 105 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH----BCSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh----hcCCCCEEE
Confidence 3679999999999999999987 6679999997555444 44445664 799999999885331 246799998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHH--hhccCCcEEEEEeCcH
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVS--DLLVHDGKVFLQSDIE 347 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~--r~LkpgG~l~l~tD~~ 347 (416)
++. |+. . ...+.+++.+. ++|+|||.+++.+...
T Consensus 106 ~~~--~~~----~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 106 LDP--PYA----K---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ECC--SSH----H---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred ECC--CCC----c---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 863 331 1 11246677776 9999999999987543
No 144
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.19 E-value=9.7e-11 Score=106.92 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=75.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||+|||+|.+++.++++.. .+++|+|++.. |.++++..+++|++++++|+.+.+ +..+++||.|+++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~----~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL----AQKGTPHNIVFVD 129 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH----SSCCCCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH----hhcCCCCCEEEEC
Confidence 57899999999999998887643 48999997554 444555567789999999998853 2245789999886
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHh--hccCCcEEEEEeCcH
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSD--LLVHDGKVFLQSDIE 347 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r--~LkpgG~l~l~tD~~ 347 (416)
.| ++. . ..+.+++.+.+ +|+|||.+++.+...
T Consensus 130 ~p--~~~-~------~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 130 PP--FRR-G------LLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CS--SST-T------THHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CC--CCC-C------cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 33 321 1 12367777765 599999999987543
No 145
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.18 E-value=1.3e-10 Score=106.20 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=75.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
..+|||||||+|.++..+|+..| +.+++++|++..+ .++++..++. +++++++|+.+.++ ..++ ||.|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~-fD~v~ 131 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA----GQRD-IDILF 131 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT----TCCS-EEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc----cCCC-CCEEE
Confidence 57899999999999999999988 8899999975544 4444455664 59999999987632 1246 99999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+..+.+ ..+.+++++.++|||||.+++.
T Consensus 132 ~~~~~~-----------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 132 MDCDVF-----------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EETTTS-----------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EcCChh-----------hhHHHHHHHHHhcCCCeEEEEE
Confidence 873211 1258999999999999999874
No 146
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.18 E-value=1.6e-10 Score=109.12 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=78.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCC-CCeEEEEchH----HHHHHHHHHhCC-CcEEEEEcChhhhhhhhhcc--CCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELV----THCRDSLQLSGI-TNGYFIATNATSTFRSIVAS--YPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~----~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~--~~~s~D 301 (416)
...+|||||||+|.+++.+|+..| +.+++++|++ ..|.+++++.++ ++++++++|+.+.++..... .+++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 357999999999999999999987 7899999964 455555666677 47999999998865432100 157899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.|++. .+. . ..+.+++.+.++|||||.+++.
T Consensus 159 ~V~~d---~~~--~------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 159 FIFVD---ADK--D------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEEEC---SCS--T------THHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEc---Cch--H------HHHHHHHHHHHhCCCCeEEEEe
Confidence 99875 221 1 1258899999999999999874
No 147
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.18 E-value=8e-11 Score=115.32 Aligned_cols=123 Identities=14% Similarity=0.094 Sum_probs=85.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------C--CCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------G--ITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~--l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|..+..+++..|..+++++|++..+++.++++ + .++++++.+|+.+.++. .+++||
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~----~~~~fD 183 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN----HKNEFD 183 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH----CTTCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh----cCCCce
Confidence 45799999999999999999987889999999876666655432 2 25799999999886432 367899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
.|+++.++|+... .++...++++.+.++|+|||.+++.+.. ......+.+.+++.
T Consensus 184 ~Ii~d~~~~~~~~----~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v 242 (314)
T 2b2c_A 184 VIITDSSDPVGPA----ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKI 242 (314)
T ss_dssp EEEECCC-----------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCcc----hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH
Confidence 9999887776321 1234468999999999999999997532 23344455555543
No 148
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.18 E-value=7.7e-11 Score=113.51 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=73.5
Q ss_pred CCeEEEEeccccHHHH----HHHHhCCCCeE--EEEchHHHHHHHHHH-----hCCCcEEE--EEcChhhhhhhh-hccC
Q 014919 231 QPLVVDIGSGNGLFLL----GMARKRKDLNF--LGLELVTHCRDSLQL-----SGITNGYF--IATNATSTFRSI-VASY 296 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~----~lA~~~p~~~~--iGvD~~~~a~~~a~~-----~~l~nv~f--~~~Da~~l~~~~-~~~~ 296 (416)
+.+|||||||+|.++. .++.++|+..+ +|+|.+..+++.+++ .+++|+.+ .++++.++...+ .+++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 5689999999997654 44556788854 999976665554432 25667655 466666542111 0124
Q ss_pred CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 297 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 297 ~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+++||.|++++.-.|..+. ..+|++++|+|||||.+.+..
T Consensus 133 ~~~fD~V~~~~~l~~~~d~--------~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDI--------PATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCEEEEEEESCGGGCSCH--------HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecCCH--------HHHHHHHHHHcCCCcEEEEEE
Confidence 7899999998766654332 378999999999999999863
No 149
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.17 E-value=1.8e-10 Score=110.21 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=75.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++.++ .+++|+|++..+++.+ ...++ .++.++++|+.++ +++||.|+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------~~~fD~v~ 134 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF--------DEPVDRIV 134 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC--------CCCCSEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC--------CCCeeEEE
Confidence 467999999999999999997764 5999999865554443 33455 4899999998765 27899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+...-.+.... ....+++++.++|||||.+++.+
T Consensus 135 ~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHFGHE------RYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGTCTT------THHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeCchhhcChH------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 87433222111 12488999999999999999864
No 150
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.17 E-value=4e-11 Score=113.26 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=78.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC-C
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC-P 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f-p 308 (416)
.+.+|||||||+|.++..+++.. .+++|+|++..+++.+++. ..++.++++|+.++ +. +++||.|++.+ .
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~-~~~~~~~~~d~~~~-----~~-~~~fD~v~~~~~~ 120 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRR-NPDAVLHHGDMRDF-----SL-GRRFSAVTCMFSS 120 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHH-CTTSEEEECCTTTC-----CC-SCCEEEEEECTTG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhh-CCCCEEEECChHHC-----Cc-cCCcCEEEEcCch
Confidence 35899999999999999999884 4899999988888777654 34899999999886 32 68999999875 4
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.|..... ....++++++++|||||.|++.
T Consensus 121 l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 121 IGHLAGQA-----ELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhhcCCHH-----HHHHHHHHHHHhcCCCcEEEEE
Confidence 33321111 1247899999999999999995
No 151
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.17 E-value=3.3e-11 Score=109.37 Aligned_cols=101 Identities=11% Similarity=0.073 Sum_probs=73.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||+|||+|.++..++.. ++.+++|+|++..+++.+ ...+ .|++++++|+.++ ++++++||.|+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~-----~~~~~~fD~v~~~ 96 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKL-----PFKDESMSFVYSY 96 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSC-----CSCTTCEEEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhC-----CCCCCceeEEEEc
Confidence 689999999999985555443 567999999766555443 3334 5799999999876 3357899999986
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.+-.+.. . -....++++++++|||||.+++.+
T Consensus 97 ~~l~~~~-~-----~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 97 GTIFHMR-K-----NDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SCGGGSC-H-----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHhCC-H-----HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4322211 0 112488999999999999999864
No 152
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.16 E-value=2.3e-10 Score=107.25 Aligned_cols=122 Identities=12% Similarity=0.105 Sum_probs=84.6
Q ss_pred CCCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.++..+|+. .|..+++|+|++..++ +.+++ ..|+.++++|+... ..... ..++||.|+
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~-~~~~~-~~~~~D~I~ 151 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFP-QSYKS-VVENVDVLY 151 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCG-GGTTT-TCCCEEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccc-hhhhc-cccceEEEE
Confidence 4789999999999999999987 4688999999876553 33322 37999999999864 21101 246899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC---------cHHHHHHHHHHHHhCCCCce
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD---------IEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD---------~~~~~~~~~~~~~~~~~~~~ 365 (416)
++.+.|+. ...++..+.+.|||||+|++..- .++.++...+.+++++|...
T Consensus 152 ~d~a~~~~----------~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~ 211 (232)
T 3id6_C 152 VDIAQPDQ----------TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETI 211 (232)
T ss_dssp ECCCCTTH----------HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEE
T ss_pred ecCCChhH----------HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 98765531 11345566779999999998621 11223445566777776543
No 153
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.16 E-value=9.6e-11 Score=105.97 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=74.3
Q ss_pred eEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 233 LVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 233 ~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+|||||||+|.++..+++. ..+++|+|++..+++.+ ...+. ++.++++|+.++ ++++++||.|++.+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-----~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADF-----DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTB-----SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhc-----CCCcCCccEEEEEhh
Confidence 9999999999999999987 56999999766555444 33354 899999999876 335689999998753
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.+ +. -....+++++.++|+|||.+++.+
T Consensus 104 -~~----~~---~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 -HL----PS---SLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp -CC----CH---HHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred -cC----CH---HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 11 10 012488999999999999999975
No 154
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.16 E-value=1.4e-10 Score=110.96 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=80.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCC-CcEEEEEcChhhhhhhhhcc-CCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGI-TNGYFIATNATSTFRSIVAS-YPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l-~nv~f~~~Da~~l~~~~~~~-~~~s~D~v 303 (416)
.+.+|||||||+|.++..+++. +..+++|+|++..+++.++ ..++ .|+.++++|+.++ ++ .+++||.|
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~~fD~v 137 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-----HMDLGKEFDVI 137 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-----CCCCSSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-----ccCCCCCcCEE
Confidence 4689999999999999998886 5569999998665554443 3344 4799999999876 33 46789999
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE 348 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~ 348 (416)
++.+.-.+. ..|.. ....+++++.++|||||.+++.+.+..
T Consensus 138 ~~~~~l~~~-~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~ 178 (298)
T 1ri5_A 138 SSQFSFHYA-FSTSE---SLDIAQRNIARHLRPGGYFIMTVPSRD 178 (298)
T ss_dssp EEESCGGGG-GSSHH---HHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred EECchhhhh-cCCHH---HHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 988543220 01111 124899999999999999999876543
No 155
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.15 E-value=1.1e-10 Score=113.40 Aligned_cols=113 Identities=14% Similarity=0.068 Sum_probs=81.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH----h-------CCCcEEEEEcChhhhh-hhhhccCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL----S-------GITNGYFIATNATSTF-RSIVASYP 297 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~----~-------~l~nv~f~~~Da~~l~-~~~~~~~~ 297 (416)
...+|||||||+|.++..+++. +..+++|+|++..+++.+++ . +..+++++++|+..+. ...++.++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3579999999999999999984 67899999986655554432 2 4458999999998761 01122124
Q ss_pred CceeEEEEECCCCCC-CCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH
Q 014919 298 GKLILVSIQCPNPDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE 348 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~-k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~ 348 (416)
++||.|++++.-.|. .... ....++++++++|||||.+++.+...+
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~-----~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYE-----QADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHH-----HHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred CCEEEEEEecchhhccCCHH-----HHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 589999998766653 1111 124899999999999999999876543
No 156
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.15 E-value=1.4e-10 Score=113.53 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=80.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|..+..+|+..+ ..+++|+|++.. +.+++++.++.|++++++|+..+.. .+++||.|+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-----~~~~fD~Il 192 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-----LNVEFDKIL 192 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-----GCCCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-----ccccCCEEE
Confidence 367999999999999999999864 589999997544 4555566788899999999988621 256899999
Q ss_pred EECCCC----CCCCcchhh----------hhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNP----DFNRPEHRW----------RMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdp----w~k~~h~kr----------Rl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++.|-. +.+.+..++ .-.+..+|+++.++|||||++++.|
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 874311 111110000 1124689999999999999999975
No 157
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.15 E-value=3.2e-10 Score=108.54 Aligned_cols=114 Identities=14% Similarity=0.184 Sum_probs=81.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC-CeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|..+..+|+..++ .+++|+|++.. +.+++++.+++|+.++++|+..+.. .++..+++||.|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~-~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKD-YLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHH-HHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcch-hhhhccccCCEEE
Confidence 3679999999999999999998776 89999997544 4455556788899999999988722 1110256899999
Q ss_pred EECCCCCCCC--cch--------hhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNR--PEH--------RWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~--~h~--------krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+..|-..... ++. ...-.+..+++.+.+.|||||++++.|
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 8733211000 000 000134689999999999999999976
No 158
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.15 E-value=9.6e-11 Score=113.06 Aligned_cols=119 Identities=12% Similarity=0.150 Sum_probs=85.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCc-EEEEEcChhhhhhhhhccCCCce---eE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITN-GYFIATNATSTFRSIVASYPGKL---IL 302 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~---D~ 302 (416)
+.+|||+|||+|.+++.+|+. |+.+++|+|++..++ ++++.+++.| ++|+++|+.+.+ +++| |.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-------~~~f~~~D~ 195 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-------KEKFASIEM 195 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-------GGGTTTCCE
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-------ccccCCCCE
Confidence 578999999999999999999 999999999865554 4455567775 999999998742 2467 99
Q ss_pred EEEECCCCCCCCc--------chhhh-hh----hHHHHHHHH-hhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 303 VSIQCPNPDFNRP--------EHRWR-MV----QRSLVEAVS-DLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 303 v~~~fpdpw~k~~--------h~krR-l~----~~~~l~~i~-r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
|++| .|+.... |..+. +. ...+++++. +.|+|||.+++.+... ..+.+.+.+.+.
T Consensus 196 Ivsn--PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~-q~~~v~~~~~~~ 264 (284)
T 1nv8_A 196 ILSN--PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED-QVEELKKIVSDT 264 (284)
T ss_dssp EEEC--CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT-CHHHHTTTSTTC
T ss_pred EEEc--CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch-HHHHHHHHHHhC
Confidence 9998 4443221 11000 00 016899999 9999999999987653 455555555443
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.15 E-value=1.6e-10 Score=114.70 Aligned_cols=101 Identities=16% Similarity=0.210 Sum_probs=77.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchH---HHHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV---THCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~---~~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.++..+|++ +..+++|+|++ ..|.++++.+++.+ ++++++|+.++ ++++++||.|++.
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~Iis~ 140 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-----ELPVEKVDIIISE 140 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-----CCSSSCEEEEEEC
T ss_pred CCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-----cCCCCceEEEEEc
Confidence 689999999999999999987 66799999975 45566666677765 99999999887 3356899999986
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
....+.... -..+.+++++.++|||||.++.
T Consensus 141 ~~~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 141 WMGYCLFYE-----SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCBBTBTBT-----CCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccCc-----hhHHHHHHHHHHhCCCCCEEcc
Confidence 432221000 0125789999999999999753
No 160
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.15 E-value=8.9e-11 Score=110.98 Aligned_cols=101 Identities=16% Similarity=0.199 Sum_probs=78.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC-
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP- 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp- 308 (416)
.+.+|||||||+|.++..+++. ..+++|+|++..+++.+++....+ ++++|+.++ ++++++||.|++..+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~--~~~~d~~~~-----~~~~~~fD~v~~~~~~ 124 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKN--VVEAKAEDL-----PFPSGAFEAVLALGDV 124 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSC--EEECCTTSC-----CSCTTCEEEEEECSSH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCC--EEECcHHHC-----CCCCCCEEEEEEcchh
Confidence 3679999999999999999987 569999999888887776654444 889998876 335789999987532
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
..|..+ ...+++++.++|||||.+++.+.+.
T Consensus 125 ~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 125 LSYVEN--------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHCSC--------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred hhcccc--------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 111111 2488999999999999999987664
No 161
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.14 E-value=1.1e-10 Score=107.28 Aligned_cols=92 Identities=13% Similarity=0.159 Sum_probs=74.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+.+|||||||+|.++..+++. +|+|++..+++.+++. +++++++|+..+ ++++++||.|++...-.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~---~~~~~~~d~~~~-----~~~~~~fD~v~~~~~l~ 113 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR---GVFVLKGTAENL-----PLKDESFDFALMVTTIC 113 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT---TCEEEECBTTBC-----CSCTTCEEEEEEESCGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc---CCEEEEcccccC-----CCCCCCeeEEEEcchHh
Confidence 578999999999999988765 9999988888877665 789999998775 33567999999885433
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+..+ ...+++++.++|+|||.+++.+
T Consensus 114 ~~~~--------~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 114 FVDD--------PERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp GSSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccC--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 3211 1489999999999999999874
No 162
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.14 E-value=2.7e-10 Score=110.76 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=76.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++.+ +.+++|+|++..+++.+ ...++. ++.++++|+.++ +++||.|+
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------~~~fD~v~ 160 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--------AEPVDRIV 160 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--------CCCCSEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--------CCCcCEEE
Confidence 46799999999999999999986 56999999865554443 344654 699999998765 37899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+...-.+.... ....+++++.++|||||.+++.+
T Consensus 161 ~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 161 SIEAFEHFGHE------NYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EESCGGGTCGG------GHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeChHHhcCHH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 87543322111 12489999999999999999864
No 163
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.14 E-value=2.6e-10 Score=103.90 Aligned_cols=96 Identities=17% Similarity=0.179 Sum_probs=75.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++. ..+++|+|++.. |.+++...+++|++++++|+.+... .+++||.|++
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~D~i~~ 149 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-----ARAPFDAIIV 149 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-----GGCCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-----cCCCccEEEE
Confidence 4689999999999999999998 679999997554 4444555678899999999987521 3578999999
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+.+.++.. +.+.+.|||||++++....
T Consensus 150 ~~~~~~~~--------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 150 TAAPPEIP--------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSBCSSCC--------------THHHHTEEEEEEEEEEECS
T ss_pred ccchhhhh--------------HHHHHhcccCcEEEEEEcC
Confidence 75544421 2578999999999997654
No 164
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.14 E-value=6.3e-11 Score=119.20 Aligned_cols=101 Identities=17% Similarity=0.178 Sum_probs=72.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHH-----------HHHhCC--CcEEEEEcChhhhhhhhhccC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDS-----------LQLSGI--TNGYFIATNATSTFRSIVASY 296 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~-----------a~~~~l--~nv~f~~~Da~~l~~~~~~~~ 296 (416)
.+.+|||||||+|..++.+|...+..+++|||++..+.+. ++..++ .++.|+++|+.++ + ++..
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l-p--~~d~ 249 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE-E--WRER 249 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH-H--HHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC-c--cccc
Confidence 4789999999999999999998876679999975433222 233455 6899999999886 2 1100
Q ss_pred CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 297 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 297 ~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
-.++|+|++|.+ ++. .. ....|.+++++|||||+|++
T Consensus 250 ~~~aDVVf~Nn~--~F~-pd------l~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 250 IANTSVIFVNNF--AFG-PE------VDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp HHTCSEEEECCT--TCC-HH------HHHHHHHHHTTSCTTCEEEE
T ss_pred cCCccEEEEccc--ccC-ch------HHHHHHHHHHcCCCCcEEEE
Confidence 146899998733 221 11 12567889999999999987
No 165
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.14 E-value=4.9e-10 Score=112.42 Aligned_cols=130 Identities=15% Similarity=0.098 Sum_probs=89.3
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+..|||+|||+|.+++.+|+. ..+++|+|++..+ .++++.++++|++|+++|+.++++... ..+.+||.|+++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~-~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLE-KEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHH-HTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHH-hcCCCeeEEEEC
Confidence 578999999999999999998 5789999975544 455556788899999999988754221 125689999885
Q ss_pred CCCCCCCCcchhhhh--hhHHHHHHHHhhccCCcEEEEEeCcH----H-HHHHHHHHHHhCCCCc
Q 014919 307 CPNPDFNRPEHRWRM--VQRSLVEAVSDLLVHDGKVFLQSDIE----E-VMLRMKQQFLEYGKGK 364 (416)
Q Consensus 307 fpdpw~k~~h~krRl--~~~~~l~~i~r~LkpgG~l~l~tD~~----~-~~~~~~~~~~~~~~~~ 364 (416)
-| -|.+......+. ....++..+.++|+|||.+++.+... + +.+.+.+.+.+.+...
T Consensus 287 pP-~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 287 PP-AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp CC-CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 22 122211111111 23578999999999999999986542 2 2333334666666543
No 166
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.13 E-value=3.5e-10 Score=105.58 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=77.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHHH----HHHHHHHhCCCc-EEEEEcChhhhhhhhhc----------
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVTH----CRDSLQLSGITN-GYFIATNATSTFRSIVA---------- 294 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~----a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~---------- 294 (416)
+.+|||||||+|.++..+|+..| ..+++++|++.. |.++++..++.| ++++++|+.+.++....
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 67999999999999999999987 789999997544 444455567765 99999999875432210
Q ss_pred cCC--CceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 295 SYP--GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 295 ~~~--~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+++ ++||.|++.+..+ ..+.+++.+.+.|+|||.+++.+
T Consensus 141 f~~~~~~fD~I~~~~~~~-----------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKE-----------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCGG-----------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCHH-----------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 122 7899998863211 12488999999999999999853
No 167
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.13 E-value=3.1e-10 Score=104.77 Aligned_cols=102 Identities=17% Similarity=0.108 Sum_probs=77.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCC-CCeEEEEchH----HHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCC--Ccee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELV----THCRDSLQLSGI-TNGYFIATNATSTFRSIVASYP--GKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~----~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~--~s~D 301 (416)
.+.+|||||||+|.++..+|+..| +.+++++|++ ..|.++++..++ .+++++++|+.+.++.... .. ++||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~-~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA-AGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-TTCTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHh-cCCCCCcc
Confidence 357999999999999999999887 7899999964 445555556676 5899999999876443211 11 6899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.|++. ++. . ....+++++.+.|+|||.+++.
T Consensus 148 ~v~~d---~~~--~------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 148 VAVVD---ADK--E------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEEC---SCS--T------THHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEC---CCH--H------HHHHHHHHHHHHcCCCeEEEEE
Confidence 99885 321 1 1248899999999999999883
No 168
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.13 E-value=1.1e-10 Score=108.00 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=78.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC-C
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC-P 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f-p 308 (416)
.+.+|||||||+|.++..+++..+ +++|+|++..+++.+++. .++++++++|+.++ +. +++||.|++.+ .
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~-~~~~~~~~~d~~~~-----~~-~~~~D~v~~~~~~ 110 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR-LPDATLHQGDMRDF-----RL-GRKFSAVVSMFSS 110 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH-CTTCEEEECCTTTC-----CC-SSCEEEEEECTTG
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh-CCCCEEEECCHHHc-----cc-CCCCcEEEEcCch
Confidence 468999999999999999999876 899999988887776654 46799999999876 32 67899998543 2
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
-.+..... ....++++++++|+|||.+++.+
T Consensus 111 ~~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 111 VGYLKTTE-----ELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp GGGCCSHH-----HHHHHHHHHHHTEEEEEEEEECC
T ss_pred HhhcCCHH-----HHHHHHHHHHHhcCCCeEEEEEe
Confidence 22211111 12488999999999999999864
No 169
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.13 E-value=3.6e-10 Score=105.87 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=78.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCC-cEEEEEcChhhhhhhhhcc--CCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGIT-NGYFIATNATSTFRSIVAS--YPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~--~~~s~D 301 (416)
...+|||||||+|..++.+|+..| +.+++++|++. .|.+++++.++. +++++++|+.+.++..... .+++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 367999999999999999999987 79999999744 455555566775 5999999998865432110 147899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.|++. .|. . ..+.+++.+.+.|+|||.+++.
T Consensus 150 ~I~~d---~~~--~------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 150 FGFVD---ADK--P------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEC---SCG--G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEC---Cch--H------HHHHHHHHHHHhcCCCeEEEEe
Confidence 99874 331 1 1358999999999999999884
No 170
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.13 E-value=1.2e-10 Score=125.29 Aligned_cols=108 Identities=11% Similarity=0.086 Sum_probs=83.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHH----------hCCCcEEEEEcChhhhhhhhhccCCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQL----------SGITNGYFIATNATSTFRSIVASYPG 298 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~----------~~l~nv~f~~~Da~~l~~~~~~~~~~ 298 (416)
.+.+|||||||+|.++..||+.. |..+++|+|++..+++.+++ .++.|++|+++|+.++ +..++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-----p~~d~ 795 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-----DSRLH 795 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-----CTTSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-----CcccC
Confidence 46899999999999999999987 56799999987666555533 2567999999999886 33578
Q ss_pred ceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 299 KLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 299 s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
+||.|++...-.|.... ....+++++.++|||| .+++.+.+.++
T Consensus 796 sFDlVV~~eVLeHL~dp------~l~~~L~eI~RvLKPG-~LIISTPN~ey 839 (950)
T 3htx_A 796 DVDIGTCLEVIEHMEED------QACEFGEKVLSLFHPK-LLIVSTPNYEF 839 (950)
T ss_dssp SCCEEEEESCGGGSCHH------HHHHHHHHHHHTTCCS-EEEEEECBGGG
T ss_pred CeeEEEEeCchhhCChH------HHHHHHHHHHHHcCCC-EEEEEecCchh
Confidence 99999987544332211 1136899999999999 88888877655
No 171
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.13 E-value=2.1e-10 Score=114.20 Aligned_cols=104 Identities=15% Similarity=0.102 Sum_probs=76.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
...+|||||||+|.++..+++++|+.+++++|+ +..|.+++.+.++ ++++|+.+|+.+. +..+ ++++|.|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~---p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDR-DVPF---PTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSS-SCCC---CCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEcccccc-CCCC---CCCcCEEEE
Confidence 468999999999999999999999999999996 2334444444455 4799999998763 0012 368999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
...-...... ....+|++++++|||||+|++.
T Consensus 255 ~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 255 SQFLDCFSEE------EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp ESCSTTSCHH------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred echhhhCCHH------HHHHHHHHHHHhcCCCcEEEEE
Confidence 7543211111 1137899999999999999885
No 172
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.13 E-value=2.5e-10 Score=106.87 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=76.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH----HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL----QLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a----~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++. +.+++|+|++..+++.+ ...+. ++.++++|+.++ + .++++|.|++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~-----~-~~~~fD~v~~ 111 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEI-----A-FKNEFDAVTM 111 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGC-----C-CCSCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhc-----c-cCCCccEEEE
Confidence 3579999999999999999987 67999999765554443 33444 799999999876 2 2468999987
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
.+....+-.. -....++++++++|+|||.+++.+.+
T Consensus 112 ~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 112 FFSTIMYFDE-----EDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CSSGGGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCchhcCCH-----HHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 6543221111 11248899999999999999986543
No 173
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.12 E-value=6.4e-10 Score=104.60 Aligned_cols=110 Identities=10% Similarity=0.128 Sum_probs=69.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCc-EEEEEcChhhhhhhhhccC-CCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITN-GYFIATNATSTFRSIVASY-PGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~-~~s~D~v~ 304 (416)
+.+|||+|||+|.++..+|++.|+.+++|+|++.. |.++++.+++++ ++++++|+.+.+.+.++.. +++||.|+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 57899999999999999999988899999997554 444555567765 9999999876211122101 26899999
Q ss_pred EECCCCCCCCc---ch------hhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 305 IQCPNPDFNRP---EH------RWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 305 ~~fpdpw~k~~---h~------krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
++. |++... +. ++......++.+++++|||||.+.+
T Consensus 146 ~np--p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 146 CNP--PFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp ECC--CCC-------------------------CTTTTHHHHTHHHH
T ss_pred ECC--CCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 873 443221 10 0001112456667777777776655
No 174
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.11 E-value=3.1e-10 Score=105.25 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=77.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.++..+++. .+++|+|++..+++.++ ..+ .+++++++|+.++ + .+++||.|++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~-----~-~~~~fD~v~~~ 103 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMREL-----E-LPEPVDAITIL 103 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGC-----C-CSSCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhc-----C-CCCCcCEEEEe
Confidence 579999999999999999887 69999998665555443 333 5799999999876 3 24789999886
Q ss_pred C-CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 307 C-PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 307 f-pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
+ +-.+..... ....+++++.++|+|||.+++.+.....
T Consensus 104 ~~~~~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 142 (243)
T 3d2l_A 104 CDSLNYLQTEA-----DVKQTFDSAARLLTDGGKLLFDVHSPYK 142 (243)
T ss_dssp TTGGGGCCSHH-----HHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCchhhcCCHH-----HHHHHHHHHHHhcCCCeEEEEEcCCHHH
Confidence 4 222221111 1247899999999999999997765543
No 175
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.10 E-value=4.6e-10 Score=111.58 Aligned_cols=102 Identities=18% Similarity=0.223 Sum_probs=76.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
...+|||||||+|.++..+++.+|+.+++++|+ +..|.+++...++. +++|+++|+.+. + +..+|.|++
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~~~D~v~~ 254 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKP----L---PVTADVVLL 254 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----C---SCCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCc----C---CCCCCEEEE
Confidence 468999999999999999999999999999997 33344444455665 899999998652 2 234999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
...-.++.+. ....++++++++|+|||++++..
T Consensus 255 ~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 255 SFVLLNWSDE------DALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEe
Confidence 7532211111 11378999999999999988753
No 176
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.10 E-value=4.9e-10 Score=112.57 Aligned_cols=117 Identities=17% Similarity=0.204 Sum_probs=83.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.++..+++. +.+++|+|++..+++ ++..++++ ++++++|+.+.. ..+++||.|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~-----~~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEAL-----TEEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTS-----CTTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcc-----ccCCCeEEEEE
Confidence 3579999999999999999998 569999997655544 44445544 899999998762 13579999999
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH-HHHHHHHHHH
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE-EVMLRMKQQF 357 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~-~~~~~~~~~~ 357 (416)
+.|-.+...... -....+++++.++|||||.+++.+... .|...+.+.+
T Consensus 305 npp~~~~~~~~~---~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f 354 (381)
T 3dmg_A 305 NPPFHVGGAVIL---DVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKF 354 (381)
T ss_dssp CCCCCTTCSSCC---HHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHH
T ss_pred CCchhhcccccH---HHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhh
Confidence 844332111100 123589999999999999999986533 4444444444
No 177
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.10 E-value=1.6e-09 Score=98.38 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=85.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..|||+|||+|.++..+++.. ..+++|+|++..+++.++ ..++ |++++++|+.++ +++||.|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~--------~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF--------NSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC--------CCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc--------CCCCCEEEE
Confidence 36799999999999999999873 348999998766655544 3455 899999999875 248999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCce
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~ 365 (416)
+.| ++..++ -....+++++.+.| |+.+.+.++.....+...+.+.+.++...
T Consensus 119 ~~p--~~~~~~----~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 119 NPP--FGSQRK----HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVT 170 (207)
T ss_dssp CCC--CSSSST----TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEE
T ss_pred cCC--CccccC----CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 844 322221 12347889999998 55555444566667777888888886543
No 178
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.10 E-value=3.5e-10 Score=107.22 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=74.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHH----------HHHHHHHHhCC-CcEEEEEcC-hhhhhhhhhccC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVT----------HCRDSLQLSGI-TNGYFIATN-ATSTFRSIVASY 296 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~----------~a~~~a~~~~l-~nv~f~~~D-a~~l~~~~~~~~ 296 (416)
.+.+|||||||+|.++..+++++ |+.+++|+|++. .|.+++...++ +|++++++| .... .+|++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 119 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDD---LGPIA 119 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTC---CGGGT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhc---cCCCC
Confidence 46899999999999999999996 778999999754 34444545555 589999998 2211 11335
Q ss_pred CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 297 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 297 ~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+++||.|+++.+-.+.... ..+++.+.++++|||.+++.+
T Consensus 120 ~~~fD~v~~~~~l~~~~~~--------~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASA--------NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TCCCSEEEEESCGGGSSCH--------HHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCEEEEEEccchhhCCCH--------HHHHHHHHHHhCCCCEEEEEE
Confidence 7899999987543322111 256777777777899999863
No 179
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.10 E-value=4.8e-10 Score=104.50 Aligned_cols=101 Identities=18% Similarity=0.170 Sum_probs=77.3
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHHH----HHHHHHHhCCC-cEEEEEcChhhhhhhhhccCC--CceeE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVTH----CRDSLQLSGIT-NGYFIATNATSTFRSIVASYP--GKLIL 302 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~----a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~--~s~D~ 302 (416)
+.+|||||||+|.++..+|+..| +.+++++|++.. |.++++..++. +++++++|+.+.++.. +..+ ++||.
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l-~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQL-TQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH-HTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH-HhcCCCCCcCE
Confidence 57999999999999999999987 789999997554 44444556775 6999999998764432 2123 78999
Q ss_pred EEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 303 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 303 v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
|++..+. . ..+.+++++.++|+|||.+++.
T Consensus 152 V~~d~~~-----~------~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 152 IFIDADK-----R------NYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEECSCG-----G------GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCCH-----H------HHHHHHHHHHHHcCCCeEEEEe
Confidence 9875321 1 1258899999999999999984
No 180
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.10 E-value=3.8e-10 Score=110.64 Aligned_cols=102 Identities=16% Similarity=0.179 Sum_probs=76.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+..+|||||||+|.++..+++++|+.+++++|+ +..|.+++.+.++ ++++|+.+|+.+- + +. ++|.|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--p~-~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP----L--PA-GAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC----C--CC-SCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCC----C--CC-CCcEEEE
Confidence 357999999999999999999999999999996 3344444445565 5799999998632 2 23 8999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
...-.++.+. ....+|++++++|+|||++++..
T Consensus 242 ~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHDWDDL------SAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ehhhccCCHH------HHHHHHHHHHHhcCCCCEEEEEe
Confidence 7433211111 12478999999999999999853
No 181
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.09 E-value=2.7e-10 Score=104.29 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=79.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..+++. + .+++|+|++..+++.+++.. .+++++|+.+. .. ++++++||.|+++..-
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~---~~~~~~d~~~~-~~--~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL---DHVVLGDIETM-DM--PYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS---SEEEESCTTTC-CC--CSCTTCEEEEEEESCG
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC---CcEEEcchhhc-CC--CCCCCccCEEEECChh
Confidence 4689999999999999999988 4 89999999888877765432 37889998764 11 3356899999987443
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHH
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 350 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~ 350 (416)
.+..+. ..+++++.++|+|||.+++.+.+....
T Consensus 104 ~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~~ 136 (230)
T 3cc8_A 104 EHLFDP--------WAVIEKVKPYIKQNGVILASIPNVSHI 136 (230)
T ss_dssp GGSSCH--------HHHHHHTGGGEEEEEEEEEEEECTTSH
T ss_pred hhcCCH--------HHHHHHHHHHcCCCCEEEEEeCCcchH
Confidence 322111 388999999999999999987554433
No 182
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.09 E-value=7.7e-11 Score=110.86 Aligned_cols=111 Identities=12% Similarity=0.009 Sum_probs=76.5
Q ss_pred CCCeEEEEeccccHHHHHHHHh--CCCCeEEEEchHHHHHHHHHH----h---CCCc-----------------------
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLELVTHCRDSLQL----S---GITN----------------------- 277 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~--~p~~~~iGvD~~~~a~~~a~~----~---~l~n----------------------- 277 (416)
...+|||+|||+|.++..+++. .|..+++|+|++..+++.+++ . ++.+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3578999999999999999998 788899999987666555442 2 2222
Q ss_pred ---EE-------------EEEcChhhhhhhh-hccCCCceeEEEEECCCCCCCCcchh---hhhhhHHHHHHHHhhccCC
Q 014919 278 ---GY-------------FIATNATSTFRSI-VASYPGKLILVSIQCPNPDFNRPEHR---WRMVQRSLVEAVSDLLVHD 337 (416)
Q Consensus 278 ---v~-------------f~~~Da~~l~~~~-~~~~~~s~D~v~~~fpdpw~k~~h~k---rRl~~~~~l~~i~r~Lkpg 337 (416)
++ |+++|+.+..... +. ...+||.|+++. |+....+.. ..-....++++++++|+||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~fD~Iv~np--p~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-AGSAPDVVLTDL--PYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-TTCCCSEEEEEC--CGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhccccccccccceeeccccccccccccc-CCCCceEEEeCC--CeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 66 9999987642100 00 234899999983 332111100 0112358999999999999
Q ss_pred cEEEEE
Q 014919 338 GKVFLQ 343 (416)
Q Consensus 338 G~l~l~ 343 (416)
|.+++.
T Consensus 208 G~l~~~ 213 (250)
T 1o9g_A 208 AVIAVT 213 (250)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 999994
No 183
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.09 E-value=4.1e-10 Score=104.98 Aligned_cols=118 Identities=13% Similarity=0.175 Sum_probs=90.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCC-ceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPG-KLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~-s~D~v 303 (416)
.+.+|||||||+|.+++.+|+..|..+++|+|+++ .|.++++.+++. ++++.++|+.+-+ +++ .||.|
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l------~~~~~~D~I 88 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAF------EETDQVSVI 88 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC------CGGGCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhc------ccCcCCCEE
Confidence 36799999999999999999999999999999754 455566677887 5999999986542 233 69998
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCce
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~ 365 (416)
++.-. .+ . +-.++++...+.|+|+|+|+++.-. -...+++.+.++||...
T Consensus 89 viaG~--------Gg-~-~i~~Il~~~~~~L~~~~~lVlq~~~--~~~~vr~~L~~~Gf~i~ 138 (225)
T 3kr9_A 89 TIAGM--------GG-R-LIARILEEGLGKLANVERLILQPNN--REDDLRIWLQDHGFQIV 138 (225)
T ss_dssp EEEEE--------CH-H-HHHHHHHHTGGGCTTCCEEEEEESS--CHHHHHHHHHHTTEEEE
T ss_pred EEcCC--------Ch-H-HHHHHHHHHHHHhCCCCEEEEECCC--CHHHHHHHHHHCCCEEE
Confidence 86411 11 1 2248899999999999999998653 34567778889988654
No 184
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.08 E-value=1.3e-10 Score=109.05 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=74.8
Q ss_pred CCeEEEEeccccHHHHHHHHh----CCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh--hhhhhccCCCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARK----RKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST--FRSIVASYPGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~----~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l--~~~~~~~~~~s~D~v~ 304 (416)
..+|||||||+|..+..||+. .|+.+++|||++..+++.++.. ..|++++++|+.+. ++ .+ ...+||.|+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~-~~~v~~~~gD~~~~~~l~-~~--~~~~fD~I~ 157 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD-MENITLHQGDCSDLTTFE-HL--REMAHPLIF 157 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG-CTTEEEEECCSSCSGGGG-GG--SSSCSSEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc-CCceEEEECcchhHHHHH-hh--ccCCCCEEE
Confidence 579999999999999999997 7889999999876655444322 36899999999874 22 11 234799998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHh-hccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSD-LLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r-~LkpgG~l~l~ 343 (416)
+... + . ..+.+++++.+ +|||||+|++.
T Consensus 158 ~d~~---~----~----~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 158 IDNA---H----A----NTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp EESS---C----S----SHHHHHHHHHHHTCCTTCEEEEC
T ss_pred ECCc---h----H----hHHHHHHHHHHhhCCCCCEEEEE
Confidence 8643 1 1 12478999997 99999999984
No 185
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=3e-10 Score=103.85 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=76.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+++.. |+.+++|+|++.. |.+++...+++|+.+.++|+...+ + .+++||.|+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~fD~v~ 151 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY----E-PLAPYDRIY 151 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC----G-GGCCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC----C-CCCCeeEEE
Confidence 46799999999999999999987 6689999997544 444444567889999999985431 1 256899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
++.+.++. .+++.++|||||.+++.+...
T Consensus 152 ~~~~~~~~--------------~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 152 TTAAGPKI--------------PEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ESSBBSSC--------------CHHHHHTEEEEEEEEEEESSS
T ss_pred ECCchHHH--------------HHHHHHHcCCCcEEEEEECCC
Confidence 87654432 247899999999999987543
No 186
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.07 E-value=5.8e-10 Score=106.97 Aligned_cols=106 Identities=11% Similarity=0.014 Sum_probs=78.8
Q ss_pred CCeEEEEeccc---cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhh--------hhhccCC
Q 014919 231 QPLVVDIGSGN---GLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFR--------SIVASYP 297 (416)
Q Consensus 231 ~~~vLDIGCG~---G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~--------~~~~~~~ 297 (416)
...|||||||+ |.++..+++.+|+.+++|+|++..+++.+++. ...|++|+++|+.+... +.+ +.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~--d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI--DF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC--CT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC--CC
Confidence 47899999999 99888788888999999999876665554432 24689999999976410 123 23
Q ss_pred CceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 298 GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.++|.|++++.-.|..... ...+|++++++|+|||+|++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~~------~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDV------VDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp TSCCEEEETTTGGGSCTTT------HHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEEechhhhCCcHH------HHHHHHHHHHhCCCCcEEEEEE
Confidence 5899998876555433321 1378999999999999999864
No 187
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.07 E-value=6.4e-10 Score=109.91 Aligned_cols=101 Identities=18% Similarity=0.231 Sum_probs=75.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchH---HHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV---THCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~---~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+|+. +..+++|+|++ ..|.++++.+++ ++++++++|+.++ +++++++|.|++
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~~D~Ivs 137 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV-----HLPVEKVDVIIS 137 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-----CCSCSCEEEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHh-----cCCCCcEEEEEE
Confidence 3679999999999999999987 45699999964 445555666777 6899999999876 334689999997
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 341 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~ 341 (416)
+.. ++.- .+. ...+.+++++.++|||||.++
T Consensus 138 ~~~-~~~l-~~~---~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 138 EWM-GYFL-LFE---SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCC-BTTB-TTT---CHHHHHHHHHHHHEEEEEEEE
T ss_pred cCc-hhhc-cCH---HHHHHHHHHHHhhcCCCcEEE
Confidence 631 1110 111 012478999999999999987
No 188
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.07 E-value=5.4e-10 Score=110.25 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=79.4
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
..+|||||||+|.++..+++++|+.+++++|+ +..+.+++...++. +++|+.+|+.+. +. + .++.+|.|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~-~--~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDA-RN-F--EGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCG-GG-G--TTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccC-cc-c--CCCCccEEEEe
Confidence 68999999999999999999999999999996 45566666566664 699999999875 21 1 25679999987
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..-.+....+ ...+|++++++|+|||++++.
T Consensus 256 ~vlh~~~~~~------~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 256 DCLHYFDARE------AREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp SCGGGSCHHH------HHHHHHHHHHTEEEEEEEEEE
T ss_pred cccccCCHHH------HHHHHHHHHHHcCCCCEEEEE
Confidence 5432211111 148899999999999999885
No 189
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.07 E-value=8.6e-10 Score=103.09 Aligned_cols=120 Identities=14% Similarity=0.097 Sum_probs=90.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|+|||||+|.+++.+|+..|..+++|+|++. .|.++++.+++.+ +++.++|+.+.+. +.+.||.|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~-----~~~~~D~Iv 95 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE-----EADNIDTIT 95 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC-----GGGCCCEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc-----cccccCEEE
Confidence 36899999999999999999999888999999754 4555666778864 9999999877521 223699987
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCcee
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~ 366 (416)
+--. .. . +-.++|....+.|+++|+|+++.-.. .+.+++.+.++||.+..
T Consensus 96 iaGm--------Gg-~-lI~~IL~~~~~~l~~~~~lIlqp~~~--~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 96 ICGM--------GG-R-LIADILNNDIDKLQHVKTLVLQPNNR--EDDLRKWLAANDFEIVA 145 (230)
T ss_dssp EEEE--------CH-H-HHHHHHHHTGGGGTTCCEEEEEESSC--HHHHHHHHHHTTEEEEE
T ss_pred EeCC--------ch-H-HHHHHHHHHHHHhCcCCEEEEECCCC--hHHHHHHHHHCCCEEEE
Confidence 5310 11 1 22488999999999999999986442 55677888899887543
No 190
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.07 E-value=1.2e-09 Score=109.40 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=85.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..|||+|||+|.+++.+|+..+..+++|+|++.. |.++++..++ ++++|+++|+.++ +.+++++|.|+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~-----~~~~~~fD~Ii 291 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL-----SQYVDSVDFAI 291 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG-----GGTCSCEEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC-----CcccCCcCEEE
Confidence 467899999999999999999987779999997544 5555556677 5899999999987 32468999999
Q ss_pred EECCCCCCCCcc--hhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCc
Q 014919 305 IQCPNPDFNRPE--HRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 305 ~~fpdpw~k~~h--~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~ 364 (416)
+| .||..... ....-+...+++++.++| +|.+++.+.+...+ .+.+.+.|+..
T Consensus 292 ~n--pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~---~~~~~~~G~~~ 346 (373)
T 3tm4_A 292 SN--LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAI---EEAIAENGFEI 346 (373)
T ss_dssp EE--CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHH---HHHHHHTTEEE
T ss_pred EC--CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHH---HHHHHHcCCEE
Confidence 98 44432211 111123468899999999 44444445444443 34566777653
No 191
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.07 E-value=3.7e-10 Score=101.42 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=80.3
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC---------CeEEEEchHHHHHHHHHHhCCCcEEEE-EcChhhhhh-----hhhcc
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD---------LNFLGLELVTHCRDSLQLSGITNGYFI-ATNATSTFR-----SIVAS 295 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~---------~~~iGvD~~~~a~~~a~~~~l~nv~f~-~~Da~~l~~-----~~~~~ 295 (416)
+.+|||||||+|.++..++++.+. .+++|+|++.. ..+.+++++ ++|+..... ..+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~-------~~~~~~~~~~~~d~~~~~~~~~~~~~~-- 93 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI-------FPLEGATFLCPADVTDPRTSQRILEVL-- 93 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC-------CCCTTCEEECSCCTTSHHHHHHHHHHS--
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc-------ccCCCCeEEEeccCCCHHHHHHHHHhc--
Confidence 689999999999999999999765 89999998762 235689999 999865410 112
Q ss_pred CCCceeEEEEECCCCCCCCcchhh-----hhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHh
Q 014919 296 YPGKLILVSIQCPNPDFNRPEHRW-----RMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLE 359 (416)
Q Consensus 296 ~~~s~D~v~~~fpdpw~k~~h~kr-----Rl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~ 359 (416)
++++||.|+++++..+. .|+.. ......+++++.++|||||.|++.+-...-...+.+.+..
T Consensus 94 ~~~~fD~V~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 160 (196)
T 2nyu_A 94 PGRRADVILSDMAPNAT--GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTE 160 (196)
T ss_dssp GGGCEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCC--CCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHH
Confidence 34689999987543321 11100 0011478999999999999999975332223334444444
No 192
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.06 E-value=1.7e-09 Score=108.65 Aligned_cols=113 Identities=13% Similarity=0.192 Sum_probs=80.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchH----HHHHHHHHHhCCC--cEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV----THCRDSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~----~~a~~~a~~~~l~--nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.+++.+|+.. ..+++|+|++ ..|.++++.++++ |++|+++|+.+.++... ....+||.|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~-~~~~~fD~I 289 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYAR-RHHLTYDII 289 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHH-HTTCCEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHH-HhCCCccEE
Confidence 36799999999999999999863 3489999964 4555666677887 89999999988654321 124589999
Q ss_pred EEECCCCCCCCc-chhhhh--hhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 304 SIQCPNPDFNRP-EHRWRM--VQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 304 ~~~fpdpw~k~~-h~krRl--~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+++ .|.+... +..... ...++++.+.++|+|||.+++.+..
T Consensus 290 i~D--PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 290 IID--PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EEC--CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEC--CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 886 2332110 111111 1246788899999999999998754
No 193
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.06 E-value=8e-10 Score=109.56 Aligned_cols=208 Identities=12% Similarity=0.067 Sum_probs=120.5
Q ss_pred ChhhHHHHHHHhccCCeEE--Eec---cceEEEeCCCCchHHHHHHHHHhhhcCCCC---eEEEcchhHH-H-HhcccCC
Q 014919 115 GPRSVEEITSTITKCKKVI--WVG---PVKFRFSSQYSNGASKLTGMLCKVSQGTCN---VTVIGSMACK-A-IAKVSSS 184 (416)
Q Consensus 115 Gp~T~~~~~~~~~~a~~i~--wnG---p~G~~e~~~f~~GT~~l~~~~a~~~~~~~~---~~v~gg~~~~-~-~~~~~~~ 184 (416)
||.|++++++.++..+..+ |.. .+|+++.+ .|+|.+.+..+.....+.. .++.+-.... . .+.....
T Consensus 63 ~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~---~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (359)
T 1x19_A 63 GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLE---DGKWSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFYMG 139 (359)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE---TTEEEECHHHHHHSSSSCSBTTBCCHHHHHHHHHHHHHTGGG
T ss_pred CCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEee---CCeEecCHHHHHHhcCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 8999999999999876653 444 45888765 2455554332222222211 1222211111 1 1111112
Q ss_pred -ccceeeecCCceEeeeecccCCCC---c-cc----ccccCc-c-ccccccccCCCCCCeEEEEeccccHHHHHHHHhCC
Q 014919 185 -IFGLNMVESGSAVWEFLKGRMLPG---V-SA----LDRAFP-F-DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRK 253 (416)
Q Consensus 185 -~~~~st~~GGGa~le~l~gr~lPg---~-~a----L~~~~p-~-~~~~~~~f~~~~~~~vLDIGCG~G~~~~~lA~~~p 253 (416)
.+.+++ |.. |+++.. .|. . +. +..... . ...+.+.++.....+|||||||+|.++..+++++|
T Consensus 140 L~~~l~~--g~~--~~~~~~--~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p 213 (359)
T 1x19_A 140 LSQAVRG--QKN--FKGQVP--YPPVTREDNLYFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFP 213 (359)
T ss_dssp HHHHHTT--SCC--CCCSSC--SSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCT
T ss_pred HHHHHhc--CCC--Cccccc--CchhhHHHHHHHHHHHHhccchhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCC
Confidence 245566 322 555432 222 1 11 111111 0 00122223222468999999999999999999999
Q ss_pred CCeEEEEch---HHHHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHH
Q 014919 254 DLNFLGLEL---VTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEA 329 (416)
Q Consensus 254 ~~~~iGvD~---~~~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~ 329 (416)
+.+++++|+ +..|.+++...++.+ ++|+.+|+.+. +.++ .|.|++...-....+. ....+|++
T Consensus 214 ~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~--~D~v~~~~vlh~~~d~------~~~~~l~~ 280 (359)
T 1x19_A 214 ELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE-----SYPE--ADAVLFCRILYSANEQ------LSTIMCKK 280 (359)
T ss_dssp TCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS-----CCCC--CSEEEEESCGGGSCHH------HHHHHHHH
T ss_pred CCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC-----CCCC--CCEEEEechhccCCHH------HHHHHHHH
Confidence 999999996 445555555567765 99999999765 2123 3999887543211110 12478999
Q ss_pred HHhhccCCcEEEEEe
Q 014919 330 VSDLLVHDGKVFLQS 344 (416)
Q Consensus 330 i~r~LkpgG~l~l~t 344 (416)
++++|+|||++++..
T Consensus 281 ~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 281 AFDAMRSGGRLLILD 295 (359)
T ss_dssp HHTTCCTTCEEEEEE
T ss_pred HHHhcCCCCEEEEEe
Confidence 999999999997753
No 194
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.06 E-value=3e-10 Score=104.77 Aligned_cols=101 Identities=25% Similarity=0.342 Sum_probs=75.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-----CCCeEEEEchHHH----HHHHHHHhC-----CCcEEEEEcChhhhhhhhhcc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-----KDLNFLGLELVTH----CRDSLQLSG-----ITNGYFIATNATSTFRSIVAS 295 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-----p~~~~iGvD~~~~----a~~~a~~~~-----l~nv~f~~~Da~~l~~~~~~~ 295 (416)
.+.+|||||||+|.++..+++.. |+.+++|+|++.. |.+++...+ ..|++++++|+.+...... .
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~ 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK-K 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH-H
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC-c
Confidence 36799999999999999999986 5789999997544 444444556 5789999999987521000 1
Q ss_pred CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 296 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 296 ~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
..++||.|++..+.++ +++.+.+.|+|||++++...
T Consensus 159 ~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE--------------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS--------------CCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH--------------HHHHHHHhcCCCcEEEEEEc
Confidence 2568999988754332 34778999999999999764
No 195
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.06 E-value=2.6e-10 Score=112.77 Aligned_cols=116 Identities=17% Similarity=0.279 Sum_probs=82.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
..+|||||||+|.++..+++.+|+.+++|+|++..+++ ++..+++. ++++.+|+... .+++||.|+++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~-------~~~~fD~Iv~~ 268 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSE-------VKGRFDMIISN 268 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTT-------CCSCEEEEEEC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEcccccc-------ccCCeeEEEEC
Confidence 56899999999999999999999999999997655544 44444543 67888988654 26789999998
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC-cHHHHHHHHHHH
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQF 357 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD-~~~~~~~~~~~~ 357 (416)
.|-.+....+ .-....++++++++|||||.+++.+. ...|...+.+.+
T Consensus 269 ~~~~~g~~~~---~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f 317 (343)
T 2pjd_A 269 PPFHDGMQTS---LDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETF 317 (343)
T ss_dssp CCCCSSSHHH---HHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHH
T ss_pred CCcccCccCC---HHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhc
Confidence 4422210001 11235899999999999999998753 333444444444
No 196
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.06 E-value=3.5e-10 Score=104.29 Aligned_cols=97 Identities=14% Similarity=0.263 Sum_probs=73.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHH----HHHHHhC-----CCcEEEEEcChhhhhhhhhccCCCc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCR----DSLQLSG-----ITNGYFIATNATSTFRSIVASYPGK 299 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~----~~a~~~~-----l~nv~f~~~Da~~l~~~~~~~~~~s 299 (416)
.+.+|||||||+|.++..+++.. |..+++|+|++..++ +++...+ .+|+.++++|+.... . .+++
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~--~~~~ 151 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---A--EEAP 151 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---G--GGCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc---c--cCCC
Confidence 36799999999999999999885 667999999755444 4444434 468999999987541 1 3568
Q ss_pred eeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 300 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 300 ~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
||.|++..+.+ .+++++.++|||||.+++.+.
T Consensus 152 fD~i~~~~~~~--------------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 152 YDAIHVGAAAP--------------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEEEECSBBS--------------SCCHHHHHTEEEEEEEEEEES
T ss_pred cCEEEECCchH--------------HHHHHHHHhcCCCcEEEEEEe
Confidence 99998874432 245688999999999999764
No 197
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.05 E-value=2.9e-10 Score=103.23 Aligned_cols=121 Identities=14% Similarity=0.103 Sum_probs=80.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhh-----hhhhc-cCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTF-----RSIVA-SYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~-----~~~~~-~~~~s~D~v 303 (416)
.+.+|||+|||+|.++..+|++ ..+++|+|++.. ...+|++++++|+.+.. .+.++ ...++||.|
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~-------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~V 95 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM-------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDV 95 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC-------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc-------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEE
Confidence 3689999999999999999988 779999998652 24578999999987641 11120 001489999
Q ss_pred EEECCCCCCCCc---chhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHh
Q 014919 304 SIQCPNPDFNRP---EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLE 359 (416)
Q Consensus 304 ~~~fpdpw~k~~---h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~ 359 (416)
+++.+..+.... |.+..-.....++.+.++|||||.|++.+-...-...+...++.
T Consensus 96 lsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~ 154 (191)
T 3dou_A 96 VSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK 154 (191)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG
T ss_pred ecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH
Confidence 886432221110 11101113577899999999999999875333334445555544
No 198
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.05 E-value=7.7e-10 Score=108.09 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=76.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||||||+|.++..+|+..+ +.+++|+|++.. |.++++..+++|++++++|+.+.+. .+++||.|+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-----~~~~fD~Iv 149 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-----EFSPYDVIF 149 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-----GGCCEEEEE
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-----cCCCeEEEE
Confidence 367999999999999999999877 478999997544 4444555688899999999987521 357899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+..+-++. .+.+.+.|||||.+++....
T Consensus 150 ~~~~~~~~--------------~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDEV--------------PETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSCC--------------CHHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHHH--------------HHHHHHhcCCCcEEEEEECC
Confidence 88554432 14678899999999998654
No 199
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.05 E-value=1.7e-09 Score=108.92 Aligned_cols=131 Identities=12% Similarity=0.119 Sum_probs=89.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCC-C-cEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGI-T-NGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l-~-nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.+++.+|+.. ..+++|+|++..+ .++++.+++ + |++|+++|+.+++.... ....+||.|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~-~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYR-DRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH-HTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHH-hcCCCCCEE
Confidence 36899999999999999999874 4589999976554 445556677 6 89999999988754221 124689999
Q ss_pred EEECCCCCCCC-cchhhh--hhhHHHHHHHHhhccCCcEEEEEeCcH-----HHHHHHHHHHHhCCCCc
Q 014919 304 SIQCPNPDFNR-PEHRWR--MVQRSLVEAVSDLLVHDGKVFLQSDIE-----EVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 304 ~~~fpdpw~k~-~h~krR--l~~~~~l~~i~r~LkpgG~l~l~tD~~-----~~~~~~~~~~~~~~~~~ 364 (416)
+++. |.+.. .....+ -....++..+.+.|+|||.+++.+... .+.+.+.+.+.+.+...
T Consensus 298 i~dp--P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 298 VMDP--PKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp EECC--SSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred EECC--CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 8863 32211 111000 123588999999999999999987543 22333334666666543
No 200
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=7.6e-10 Score=110.39 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=76.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
...+|||||||+|.++..+++++|+.+++++|+ +..|.+++...++ ++++|+.+|+.+. + +. .+|.|++
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~----~--p~-~~D~v~~ 274 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFET----I--PD-GADVYLI 274 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTC----C--CS-SCSEEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCC----C--CC-CceEEEh
Confidence 468999999999999999999999999999997 3344444555565 5799999998732 2 23 7999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
...-.++.+. ....+|++++++|+|||++++.
T Consensus 275 ~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 275 KHVLHDWDDD------DVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEE
T ss_pred hhhhccCCHH------HHHHHHHHHHHHcCCCCEEEEE
Confidence 7433221111 1137899999999999999985
No 201
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.04 E-value=2.2e-09 Score=108.06 Aligned_cols=113 Identities=17% Similarity=0.167 Sum_probs=80.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.+++.+|+. +..+++|+|++..+ .++++.++++ |++|+++|+.++++... ...++||.|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~-~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQ-KKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH-HTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHH-hhCCCCCEEE
Confidence 3689999999999999999987 45589999975544 4455567777 89999999988743221 1256899998
Q ss_pred EECCCCCCC-Ccchhhh--hhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 305 IQCPNPDFN-RPEHRWR--MVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 305 ~~fpdpw~k-~~h~krR--l~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
++ .|.+. ....... -....++.++.+.|+|||.+++.+..
T Consensus 295 ~d--pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 295 LD--PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EC--CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred EC--CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 85 23222 1111111 11357899999999999999988654
No 202
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.04 E-value=4e-10 Score=104.92 Aligned_cols=99 Identities=14% Similarity=0.239 Sum_probs=75.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+++..+ .+++|+|++.. |.+++...++.|+.++.+|+..- ++ ....||.|++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~-~~~~fD~Ii~ 164 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----FP-PKAPYDVIIV 164 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CG-GGCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC----CC-CCCCccEEEE
Confidence 367899999999999999999987 89999997544 44445556788999999998322 11 1235999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE 348 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~ 348 (416)
..+.++ +.+++.+.|+|||.+++.+....
T Consensus 165 ~~~~~~--------------~~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 165 TAGAPK--------------IPEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CSBBSS--------------CCHHHHHTEEEEEEEEEEECSSS
T ss_pred CCcHHH--------------HHHHHHHhcCCCcEEEEEEecCC
Confidence 755443 12467899999999999887543
No 203
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=1.3e-09 Score=102.69 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=89.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCC-ceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGITN-GYFIATNATSTFRSIVASYPG-KLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~-s~D~v 303 (416)
.+.+|||||||+|.+++.+|+..|..+++|+|++. .|.++++.+++.| +++.++|..+.+ .++ +||.|
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~------~~~~~~D~I 94 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI------EKKDAIDTI 94 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC------CGGGCCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc------CccccccEE
Confidence 36799999999999999999999888999999754 4555566678865 999999987752 233 59998
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCc
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~ 364 (416)
++.- -.+ .+ -.++|+...+.|+++++|+++.-.. ...+++.+.++||.+
T Consensus 95 viag--------mGg-~l-I~~IL~~~~~~L~~~~~lIlq~~~~--~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 95 VIAG--------MGG-TL-IRTILEEGAAKLAGVTKLILQPNIA--AWQLREWSEQNNWLI 143 (244)
T ss_dssp EEEE--------ECH-HH-HHHHHHHTGGGGTTCCEEEEEESSC--HHHHHHHHHHHTEEE
T ss_pred EEeC--------Cch-HH-HHHHHHHHHHHhCCCCEEEEEcCCC--hHHHHHHHHHCCCEE
Confidence 7531 111 12 2488999999999999999986432 445677788888864
No 204
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.02 E-value=9.6e-10 Score=108.80 Aligned_cols=102 Identities=18% Similarity=0.288 Sum_probs=77.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
...+|||||||+|.++..+++++|+.+++++|+ +..|.+++...++. |++|+.+|+.+. + +..+|.|++
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~~~D~v~~ 255 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEP----L---PRKADAIIL 255 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSC----C---SSCEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCC----C---CCCccEEEE
Confidence 467999999999999999999999999999995 45555555566765 899999998652 2 234999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
...-..+... ....++++++++|+|||++++..
T Consensus 256 ~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 256 SFVLLNWPDH------DAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 7542211111 11378999999999999998863
No 205
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.02 E-value=1.7e-09 Score=97.86 Aligned_cols=112 Identities=13% Similarity=0.212 Sum_probs=79.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||+|||+|.++..+++. +..+++|+|++..+++.++++- .|++++++|+.++ +++||.|+++.|-
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~d~~~~--------~~~~D~v~~~~p~ 120 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNC-GGVNFMVADVSEI--------SGKYDTWIMNPPF 120 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHC-TTSEEEECCGGGC--------CCCEEEEEECCCC
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhc-CCCEEEECcHHHC--------CCCeeEEEECCCc
Confidence 3679999999999999999987 5568999999888887776543 3899999999875 3689999988433
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYG 361 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~ 361 (416)
.|. ++. ....+++++.+.| |.+++..+. ....++.+.+.+.+
T Consensus 121 ~~~--~~~----~~~~~l~~~~~~~---g~~~~~~~~-~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 121 GSV--VKH----SDRAFIDKAFETS---MWIYSIGNA-KARDFLRREFSARG 162 (200)
T ss_dssp -------------CHHHHHHHHHHE---EEEEEEEEG-GGHHHHHHHHHHHE
T ss_pred hhc--cCc----hhHHHHHHHHHhc---CcEEEEEcC-chHHHHHHHHHHCC
Confidence 322 211 1247889999998 445554433 33456667777766
No 206
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.02 E-value=5.4e-11 Score=110.89 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=72.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+.+|||+|||+|.++..+|+. ..+++|+|++.. |.++++..++ +|++|+++|+.++. .+++||.|++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~D~v~~ 150 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA------SFLKADVVFL 150 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG------GGCCCSEEEE
T ss_pred CCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc------ccCCCCEEEE
Confidence 689999999999999999987 489999997554 4445556677 58999999998872 3578999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
+.|-.+. .... ..+.+++++|+|||.+++
T Consensus 151 ~~~~~~~--~~~~------~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 151 SPPWGGP--DYAT------AETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CCCCSSG--GGGG------SSSBCTTTSCSSCHHHHH
T ss_pred CCCcCCc--chhh------hHHHHHHhhcCCcceeHH
Confidence 7433321 1111 245578899999998655
No 207
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.01 E-value=5.1e-10 Score=106.72 Aligned_cols=106 Identities=13% Similarity=0.127 Sum_probs=71.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+.+|||||||+|.++..||++ ..+++|+|++..+++.++++-..+ +++.++.++..+.....+++||.|++++.-
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIPKELAGHFDFVLNDRLI 120 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCCGGGTTCCSEEEEESCG
T ss_pred CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc--cceeeeeecccccccccCCCccEEEEhhhh
Confidence 4679999999999999999987 569999999888877776543332 233333332100000025789999988543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
.++...+ ...+++++.++| |||.++++...
T Consensus 121 ~~~~~~~------~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 121 NRFTTEE------ARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGSCHHH------HHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred HhCCHHH------HHHHHHHHHHhC-cCcEEEEEecc
Confidence 3221111 246899999999 99999998654
No 208
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.00 E-value=2.1e-09 Score=106.05 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=76.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCc--EEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITN--GYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~n--v~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
+.+|||+|||+|.+++.+|+.. .+++|+|++..++ ++++.++++| ++++++|+.+++.... ...++||.|+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~-~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE-RRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH-HHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHH-hcCCCceEEE
Confidence 5799999999999999999864 4999999765544 4455567774 9999999988743211 0146899999
Q ss_pred EECCCCCCCCc--c--hhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRP--E--HRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~--h--~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++. |.+... . ....-....+++.+.++|+|||.|++.+
T Consensus 231 ~dP--P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 231 TDP--PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp ECC--CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred ECC--ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 862 321110 0 0000113588999999999999977754
No 209
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.00 E-value=2e-10 Score=110.25 Aligned_cols=131 Identities=11% Similarity=0.087 Sum_probs=81.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh---------------------CC-------------
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS---------------------GI------------- 275 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~---------------------~l------------- 275 (416)
.+.+|||||||+|.+.. ++...+..+++|+|++..+++.+++. +.
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 36799999999999544 44444567999999877766654431 10
Q ss_pred CcEEEEEcChhhhhhh-hhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc--------
Q 014919 276 TNGYFIATNATSTFRS-IVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------- 346 (416)
Q Consensus 276 ~nv~f~~~Da~~l~~~-~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~-------- 346 (416)
..+.++++|+...++- ...+++++||.|++++.-.|...... ....+|++++++|||||.|++....
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~----~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~ 225 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLA----SFQRALDHITTLLRPGGHLLLIGALEESWYLAG 225 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHH----HHHHHHHHHHTTEEEEEEEEEEEEESCCEEEET
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHH----HHHHHHHHHHHhcCCCCEEEEEEecCcceEEcC
Confidence 0156778898773110 00013567999999865333111000 1248899999999999999985210
Q ss_pred -------HHHHHHHHHHHHhCCCCce
Q 014919 347 -------EEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 347 -------~~~~~~~~~~~~~~~~~~~ 365 (416)
.--.+++.+.|++.||...
T Consensus 226 ~~~~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 226 EARLTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred CeeeeeccCCHHHHHHHHHHcCCeEE
Confidence 0013456667777777543
No 210
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.99 E-value=1.7e-09 Score=108.35 Aligned_cols=101 Identities=16% Similarity=0.232 Sum_probs=75.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchH---HHHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV---THCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~---~~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+|++ ...+++|+|++ ..|.++++.+++.+ ++++++|+.++ + .+++||.|++
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~~D~Iv~ 135 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDI-----S-LPEKVDVIIS 135 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGC-----C-CSSCEEEEEE
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhc-----C-cCCcceEEEE
Confidence 4689999999999999999987 34599999964 45566666677764 99999999886 2 2378999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
.....+. . +. -....+++.+.++|||||.+++
T Consensus 136 ~~~~~~l-~-~e---~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 136 EWMGYFL-L-RE---SMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp CCCBTTB-T-TT---CTHHHHHHHHHHHEEEEEEEES
T ss_pred cChhhcc-c-ch---HHHHHHHHHHHhhCCCCeEEEE
Confidence 5321111 1 00 0124789999999999999876
No 211
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.99 E-value=2.2e-09 Score=105.54 Aligned_cols=100 Identities=15% Similarity=0.263 Sum_probs=74.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchH---HHHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV---THCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~---~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.++..+|++ +..+++|+|++ ..|.++++.+++. +++++++|+.++ +++++++|.|++.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~~D~Ivs~ 112 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-----HLPFPKVDIIISE 112 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-----CCSSSCEEEEEEC
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhc-----cCCCCcccEEEEe
Confidence 579999999999999998886 55699999964 4555566667775 699999999876 3245789999986
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 341 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~ 341 (416)
.+.... .+. -..+.++..+.++|||||.++
T Consensus 113 ~~~~~l--~~~---~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 113 WMGYFL--LYE---SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCBTTB--STT---CCHHHHHHHHHHHEEEEEEEE
T ss_pred Cchhhc--ccH---HHHHHHHHHHHhhcCCCeEEE
Confidence 332111 011 012478899999999999987
No 212
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.99 E-value=1.9e-10 Score=109.98 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=71.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCC------cEEEE--EcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGIT------NGYFI--ATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~------nv~f~--~~Da~~l~~~~~~~~~~s~D 301 (416)
.+.+|||||||+|.++..+|++ .+++|||++.. ...+.+.... |+.|+ ++|+.++ ++++||
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m-~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-------~~~~fD 142 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTL-GVGGHEVPRITESYGWNIVKFKSRVDIHTL-------PVERTD 142 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECC-CCSSCCCCCCCCBTTGGGEEEECSCCTTTS-------CCCCCS
T ss_pred CCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchh-hhhhhhhhhhhhccCCCeEEEecccCHhHC-------CCCCCc
Confidence 3679999999999999999987 68999998652 1111112222 79999 9999876 367899
Q ss_pred EEEEECCCCCCCCcch-hhhhhhHHHHHHHHhhccCCc--EEEEEeC
Q 014919 302 LVSIQCPNPDFNRPEH-RWRMVQRSLVEAVSDLLVHDG--KVFLQSD 345 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~-krRl~~~~~l~~i~r~LkpgG--~l~l~tD 345 (416)
.|++.+. ........ ..+ ...+|+.+.++||||| .|++.+-
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~--~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESER--TIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHH--HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred EEEEeCc-ccCCccchhHHH--HHHHHHHHHHHhccCCCeEEEEEeC
Confidence 9998765 22111100 001 1137899999999999 9988753
No 213
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.99 E-value=1.6e-09 Score=111.15 Aligned_cols=111 Identities=13% Similarity=0.157 Sum_probs=82.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|..+..+|+..+ ...++|+|++. .+.+++++.|+.|+.++++|+..+ ...+ +++||.|+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l-~~~~---~~~FD~Il 180 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAEL-VPHF---SGFFDRIV 180 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHH-HHHH---TTCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHh-hhhc---cccCCEEE
Confidence 468999999999999999998865 47999999754 445566678999999999999887 3223 57899999
Q ss_pred EECCCC----CCCCcchhh----------hhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNP----DFNRPEHRW----------RMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdp----w~k~~h~kr----------Rl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++-|-. +.+.+..+. .-.+.++|+.+.+.|||||+|+++|
T Consensus 181 ~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 181 VDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 873310 111111111 0124588999999999999999876
No 214
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.99 E-value=2.7e-10 Score=115.18 Aligned_cols=101 Identities=21% Similarity=0.325 Sum_probs=76.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEE--EEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGY--FIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~--f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..++++ ..+++|+|++..+++.+++.+.++.. |...++..+ ++++++||.|+++.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l-----~~~~~~fD~I~~~~ 179 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDV-----RRTEGPANVIYAAN 179 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHH-----HHHHCCEEEEEEES
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhc-----ccCCCCEEEEEECC
Confidence 4679999999999999999987 45999999998888888776655432 333344333 22468999999886
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
.-.|..+ ...++++++++|||||.+++.+.
T Consensus 180 vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 180 TLCHIPY--------VQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp CGGGCTT--------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHHhcCC--------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 5433321 14899999999999999999754
No 215
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.98 E-value=1.8e-10 Score=108.22 Aligned_cols=132 Identities=14% Similarity=0.030 Sum_probs=87.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC--CC-------------------------------
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG--IT------------------------------- 276 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~--l~------------------------------- 276 (416)
.+.+|||||||+|.++..+++..+ .+++|+|++..+++.+++.- ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 357899999999999999998765 58999998776666554321 11
Q ss_pred cE-EEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH--------
Q 014919 277 NG-YFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE-------- 347 (416)
Q Consensus 277 nv-~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~-------- 347 (416)
++ .++++|+.+... ..+...++||.|++.+.-.+.. .+. -....++++++++|||||.|++.+...
T Consensus 135 ~v~~~~~~d~~~~~~-~~~~~~~~fD~v~~~~~l~~~~-~~~---~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~ 209 (265)
T 2i62_A 135 AIKQVLKCDVTQSQP-LGGVSLPPADCLLSTLCLDAAC-PDL---PAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGE 209 (265)
T ss_dssp HEEEEEECCTTSSST-TTTCCCCCEEEEEEESCHHHHC-SSH---HHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred hheeEEEeeeccCCC-CCccccCCccEEEEhhhhhhhc-CCh---HHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCC
Confidence 28 999999987521 0001127899999875322100 010 012488999999999999999864110
Q ss_pred -----H--HHHHHHHHHHhCCCCceee
Q 014919 348 -----E--VMLRMKQQFLEYGKGKLVL 367 (416)
Q Consensus 348 -----~--~~~~~~~~~~~~~~~~~~~ 367 (416)
. -.+.+.+.+++.|+.....
T Consensus 210 ~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 210 QKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp EEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccccCHHHHHHHHHHCCCEEEEE
Confidence 0 1235667788888765433
No 216
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.98 E-value=4.8e-10 Score=107.71 Aligned_cols=102 Identities=15% Similarity=0.154 Sum_probs=74.9
Q ss_pred CCeEEEEeccccH----HHHHHHHhCC----CCeEEEEchHHHHHHHHHHhC----------------------------
Q 014919 231 QPLVVDIGSGNGL----FLLGMARKRK----DLNFLGLELVTHCRDSLQLSG---------------------------- 274 (416)
Q Consensus 231 ~~~vLDIGCG~G~----~~~~lA~~~p----~~~~iGvD~~~~a~~~a~~~~---------------------------- 274 (416)
..+|+|+|||+|. +++.|++..| +.+++|+|++..+++.|++.-
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999999 5556676645 469999999888888776421
Q ss_pred C-------CcEEEEEcChhhhhhhhhccC-CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 275 I-------TNGYFIATNATSTFRSIVASY-PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 275 l-------~nv~f~~~Da~~l~~~~~~~~-~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. .+|.|.++|+.+. |++ .++||.|++...-.++... .+..+++++++.|+|||.|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~-----~~~~~~~fDlI~crnvliyf~~~------~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEK-----QYNVPGPFDAIFCRNVMIYFDKT------TQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCS-----SCCCCCCEEEEEECSSGGGSCHH------HHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCC-----CCCcCCCeeEEEECCchHhCCHH------HHHHHHHHHHHHhCCCcEEEEE
Confidence 0 3699999998763 222 4789999986443333211 2358899999999999999984
No 217
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.98 E-value=4.4e-10 Score=102.71 Aligned_cols=106 Identities=10% Similarity=0.081 Sum_probs=80.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+..|||||||+|.++..++ .+++|+|++.. ++.++++|+.++ ++++++||.|++++.-
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-----------~~~~~~~d~~~~-----~~~~~~fD~v~~~~~l 125 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-----------DPRVTVCDMAQV-----PLEDESVDVAVFCLSL 125 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-----------STTEEESCTTSC-----SCCTTCEEEEEEESCC
T ss_pred CCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-----------CceEEEeccccC-----CCCCCCEeEEEEehhc
Confidence 35789999999999988874 58999998654 678899998875 3357899999987543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH--HHHHHHHHHHhCCCCce
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE--VMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~--~~~~~~~~~~~~~~~~~ 365 (416)
.| .. ...++++++++|+|||.+++..-... ..+.+.+.+++.|+...
T Consensus 126 ~~---~~------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 126 MG---TN------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp CS---SC------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEE
T ss_pred cc---cC------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEE
Confidence 32 11 14889999999999999999643321 24556778888887644
No 218
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.98 E-value=9.4e-10 Score=112.00 Aligned_cols=104 Identities=16% Similarity=0.101 Sum_probs=74.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----H-------HHHHHHhC--CCcEEEEEcChhhhhhhhhccC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----C-------RDSLQLSG--ITNGYFIATNATSTFRSIVASY 296 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a-------~~~a~~~~--l~nv~f~~~Da~~l~~~~~~~~ 296 (416)
.+.+|||||||+|.++..+|+..+..+++|+|++.. | .++++..+ +.|++++++|.... ...++..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~-~~~~~~~ 320 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVD-NNRVAEL 320 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTT-CHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccc-ccccccc
Confidence 468999999999999999999888779999996443 3 44455567 57999999865421 0001101
Q ss_pred CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 297 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 297 ~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.++||.|+++..- +. .. .+..|+++.++|||||++++.
T Consensus 321 ~~~FDvIvvn~~l-~~--~d------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 321 IPQCDVILVNNFL-FD--ED------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGGCSEEEECCTT-CC--HH------HHHHHHHHHTTCCTTCEEEES
T ss_pred cCCCCEEEEeCcc-cc--cc------HHHHHHHHHHhCCCCeEEEEe
Confidence 4689999986321 21 11 136789999999999999884
No 219
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=2.5e-10 Score=109.74 Aligned_cols=102 Identities=16% Similarity=0.035 Sum_probs=70.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCC------cEEEE--EcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGIT------NGYFI--ATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~------nv~f~--~~Da~~l~~~~~~~~~~s~D 301 (416)
.+.+|||||||+|.++..+|++ .+++|||++. ....+.+.... |+.|+ ++|+.++ ++++||
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-------~~~~fD 150 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-------EPFQAD 150 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-------CCCCCS
T ss_pred CCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-------CCCCcC
Confidence 3679999999999999999987 5899999865 21112112222 89999 9999875 367899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCc--EEEEEe
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDG--KVFLQS 344 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG--~l~l~t 344 (416)
.|++.+. .+.... .....-...+|+.+.++||||| .|++.+
T Consensus 151 ~Vvsd~~-~~~~~~-~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 151 TVLCDIG-ESNPTA-AVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEEECCC-CCCSCH-HHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEECCC-cCCCch-hhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9998765 221111 0000001137899999999999 988864
No 220
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.97 E-value=9.4e-10 Score=101.60 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=73.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|||||||+|.++..+++.. .+++|+|++..+++.++++ ...|++++++|+.+.+ + .+++||.|++..
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~fD~v~~~~ 142 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY----E-EEKPYDRVVVWA 142 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----G-GGCCEEEEEESS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc----c-cCCCccEEEECC
Confidence 36799999999999999999985 7999999876666555432 1128999999997631 1 257899999875
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
+-++ +.+++.++|+|||.+++.+...
T Consensus 143 ~~~~--------------~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 143 TAPT--------------LLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp BBSS--------------CCHHHHHTEEEEEEEEEEECSS
T ss_pred cHHH--------------HHHHHHHHcCCCcEEEEEEcCC
Confidence 4332 1246889999999999986543
No 221
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.97 E-value=1.9e-09 Score=106.82 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=74.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchH---HHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELV---THCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~---~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.++..+|++ +..+++|+|.+ ..|.++++.+++ ++++++++|+.++ + .++++|.|++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-----~-~~~~~D~Ivs 122 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-----S-LPEQVDIIIS 122 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-----C-CSSCEEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhC-----C-CCCceeEEEE
Confidence 3679999999999999998886 56799999964 345555566677 6899999999876 2 2468999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..+....... .....+..+.++|||||.+++.
T Consensus 123 ~~~~~~~~~~------~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 123 EPMGYMLFNE------RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCBTTBTTT------SHHHHHHHGGGGEEEEEEEESC
T ss_pred eCchhcCChH------HHHHHHHHHHhhcCCCeEEEEe
Confidence 6332111100 0136777889999999999854
No 222
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.96 E-value=1.3e-09 Score=106.68 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=75.3
Q ss_pred CeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+|||||||+|.++..+++++|+.+++++|+ +..|.+++...++ ++++|+.+|+.+. + ++++|.|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE----V---PSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC----C---CSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC----C---CCCCCEEEEch
Confidence 8999999999999999999999999999996 3444444444444 5799999998652 2 36799999875
Q ss_pred CCC-CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNP-DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdp-w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.-. |. .. ....++++++++|+|||++++.
T Consensus 242 vl~~~~-~~------~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 242 IIGDLD-EA------ASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp CGGGCC-HH------HHHHHHHHHHHHSCTTCEEEEE
T ss_pred hccCCC-HH------HHHHHHHHHHHhcCCCCEEEEE
Confidence 432 21 11 1138899999999999999986
No 223
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.96 E-value=1.2e-09 Score=104.16 Aligned_cols=107 Identities=9% Similarity=-0.090 Sum_probs=82.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--------CCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--------GITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--------~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+..+|||||||+|..+..+++. + .+++++|++..+.+.++++ .-++++++.+|+.+. . ++||
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~-------~-~~fD 141 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD-------I-KKYD 141 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC-------C-CCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH-------H-hhCC
Confidence 4579999999999999999988 7 8999999877666554321 125799999998765 2 6899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH----HHHHHHHHHHHh
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLE 359 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~----~~~~~~~~~~~~ 359 (416)
.|++..+||+ .|++.+.++|+|||.+.+.+... ..+..+.+.+.+
T Consensus 142 ~Ii~d~~dp~-------------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 190 (262)
T 2cmg_A 142 LIFCLQEPDI-------------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGG 190 (262)
T ss_dssp EEEESSCCCH-------------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHT
T ss_pred EEEECCCChH-------------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH
Confidence 9999877763 48999999999999999875332 344445555554
No 224
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.95 E-value=1.1e-09 Score=109.16 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=73.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
...+|||||||+|.++..+++++|+.+++++|+ ..+++.++ ..+|++|+.+|+.+- + +++ |.|++.+.-
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~v~~~~~d~~~~----~--p~~--D~v~~~~vl 271 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP--AFSGVEHLGGDMFDG----V--PKG--DAIFIKWIC 271 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--CCTTEEEEECCTTTC----C--CCC--SEEEEESCG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh--hcCCCEEEecCCCCC----C--CCC--CEEEEechh
Confidence 368999999999999999999999999999998 55555433 236899999998652 2 233 999887543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+.... ....+|++++++|+|||+|++.
T Consensus 272 h~~~~~------~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 272 HDWSDE------HCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp GGBCHH------HHHHHHHHHHHHSCTTCEEEEE
T ss_pred hcCCHH------HHHHHHHHHHHHcCCCCEEEEE
Confidence 211111 1137899999999999999885
No 225
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.95 E-value=2e-10 Score=109.07 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=83.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------C---------------------------CC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------G---------------------------IT 276 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~---------------------------l~ 276 (416)
.+.+|||||||+|.++..++... -.+++|+|+++.+++.++++ . ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 35789999999998877666542 23799999877666544321 0 01
Q ss_pred cEE-EEEcChhhhhhhhhccCCCceeEEEEECCCCCC-CCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH--H----
Q 014919 277 NGY-FIATNATSTFRSIVASYPGKLILVSIQCPNPDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE--E---- 348 (416)
Q Consensus 277 nv~-f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~-k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~--~---- 348 (416)
++. ++++|+....+ .-+...++||.|++++...+. .... -...++++++++|||||.|++.+-.. .
T Consensus 134 ~i~~~~~~D~~~~~~-~~~~~~~~fD~V~~~~~l~~i~~~~~-----~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g 207 (263)
T 2a14_A 134 AVKRVLKCDVHLGNP-LAPAVLPLADCVLTLLAMECACCSLD-----AYRAALCNLASLLKPGGHLVTTVTLRLPSYMVG 207 (263)
T ss_dssp HEEEEEECCTTSSST-TTTCCCCCEEEEEEESCHHHHCSSHH-----HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET
T ss_pred hhheEEeccccCCCC-CCccccCCCCEeeehHHHHHhcCCHH-----HHHHHHHHHHHHcCCCcEEEEEEeecCccceeC
Confidence 354 89999887411 001125689999998643221 0000 11478999999999999999974110 0
Q ss_pred ---------HHHHHHHHHHhCCCCcee
Q 014919 349 ---------VMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 349 ---------~~~~~~~~~~~~~~~~~~ 366 (416)
-.+++.+.+++.||....
T Consensus 208 ~~~~~~~~~~~~~l~~~l~~aGF~i~~ 234 (263)
T 2a14_A 208 KREFSCVALEKGEVEQAVLDAGFDIEQ 234 (263)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred CeEeeccccCHHHHHHHHHHCCCEEEE
Confidence 134567788888876543
No 226
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.94 E-value=8.4e-10 Score=111.36 Aligned_cols=119 Identities=16% Similarity=0.110 Sum_probs=88.0
Q ss_pred CCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
+.+|||+|||+|.++..+++++ +..+++|+|++..+.+.+ .++.++++|+... + ..++||.|+.| .
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----~~~~~~~~D~~~~-----~-~~~~fD~Ii~N--P 106 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----PWAEGILADFLLW-----E-PGEAFDLILGN--P 106 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----TTEEEEESCGGGC-----C-CSSCEEEEEEC--C
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----CCCcEEeCChhhc-----C-ccCCCCEEEEC--c
Confidence 5699999999999999999886 678999999876655433 5799999998775 1 35689999998 5
Q ss_pred CCCCCcc---------h-hhhh-------------hhHHHHHHHHhhccCCcEEEEEeCcH----HHHHHHHHHHHhCCC
Q 014919 310 PDFNRPE---------H-RWRM-------------VQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLEYGK 362 (416)
Q Consensus 310 pw~k~~h---------~-krRl-------------~~~~~l~~i~r~LkpgG~l~l~tD~~----~~~~~~~~~~~~~~~ 362 (416)
||....+ . .+.. ....|++.+.++|+|||.+.+.+... .+.+.+++.+.+.++
T Consensus 107 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 107 PYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp CCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred CccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 6643222 1 1111 12378999999999999999987543 245667777766554
No 227
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.94 E-value=1.1e-08 Score=104.27 Aligned_cols=111 Identities=11% Similarity=0.208 Sum_probs=81.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch----HHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL----VTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~----~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..|||+|||+|..+..+|+..|+.+++|+|+ +..+.+++++.++ +++++++|+..+ ...+ .+++||.|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~-~~~~--~~~~fD~Vl~ 321 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYP-SQWC--GEQQFDRILL 321 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCT-HHHH--TTCCEEEEEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhc-hhhc--ccCCCCEEEE
Confidence 467999999999999999999998899999996 4455566666676 579999999886 3223 3578999998
Q ss_pred ECCCC----CCCCcchhhh----------hhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNP----DFNRPEHRWR----------MVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdp----w~k~~h~krR----------l~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.|-. +.+.+..+++ -.+..+|+.+.+.|||||+++++|
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 74321 1111111110 124588999999999999999986
No 228
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.94 E-value=2.6e-09 Score=96.78 Aligned_cols=96 Identities=16% Similarity=0.089 Sum_probs=71.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
...|||||||+|.+++.++...|+.+|+|+|+++.+ .+++...|.. |+++ +|.... . +++++|.|.+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~----~--~~~~~DvVLa 121 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD----V--YKGTYDVVFL 121 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH----H--TTSEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc----C--CCCCcChhhH
Confidence 689999999999999999999999999999975554 4555567887 7887 555433 1 4788999998
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
+-. -|.-+. .+..+.++.+.|+|||.++-
T Consensus 122 ~k~------LHlL~~--~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 122 LKM------LPVLKQ--QDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp ETC------HHHHHH--TTCCHHHHHHTCEEEEEEEE
T ss_pred hhH------HHhhhh--hHHHHHHHHHHhCCCCEEEE
Confidence 732 222100 01345589999999998765
No 229
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.93 E-value=5.5e-09 Score=107.95 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=80.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+.+|||+|||+|..+..+|+..+ ...++|+|++. .+.+++++.++.|+.++++|+..+ ... .+++||.|++
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~-~~~---~~~~fD~Il~ 193 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF-GAA---VPEMFDAILL 193 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTH-HHH---STTCEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHh-hhh---ccccCCEEEE
Confidence 67999999999999999999865 57999999754 445556667889999999999886 221 2578999998
Q ss_pred ECCCC----CCCCcchh-----h---h--hhhHHHHHHHHhhccCCcEEEEEe
Q 014919 306 QCPNP----DFNRPEHR-----W---R--MVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 306 ~fpdp----w~k~~h~k-----r---R--l~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.-|-. +.+.+..+ . + -.+..+|+++.++|||||+|+++|
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 63210 00000000 0 0 124688999999999999999976
No 230
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.93 E-value=6.7e-10 Score=111.45 Aligned_cols=100 Identities=17% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCCeEEEEecc------ccHHHHHHHHh-CCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhh-hhhhccCCCcee
Q 014919 230 AQPLVVDIGSG------NGLFLLGMARK-RKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTF-RSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGCG------~G~~~~~lA~~-~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~-~~~~~~~~~s~D 301 (416)
...+||||||| +|..++.++++ +|+.+++|+|++..+. ...+|++|+++|+.++. ...+...+++||
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-----VDELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-----GCBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-----hcCCCcEEEEecccccchhhhhhcccCCcc
Confidence 36899999999 77777777776 5999999999876642 23478999999998861 000100157899
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.|+++.. .+ .. -...+|++++++|||||.+++.
T Consensus 291 lVisdgs-H~--~~------d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 291 IVIDDGS-HI--NA------HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EEEECSC-CC--HH------HHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCc-cc--ch------hHHHHHHHHHHhcCCCeEEEEE
Confidence 9987532 11 01 1247899999999999999985
No 231
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.93 E-value=8.8e-10 Score=101.94 Aligned_cols=96 Identities=16% Similarity=0.290 Sum_probs=72.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCC------CCeEEEEchHHHH----HHHHHHhC-----CCcEEEEEcChhhhhhhhhcc
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK------DLNFLGLELVTHC----RDSLQLSG-----ITNGYFIATNATSTFRSIVAS 295 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p------~~~~iGvD~~~~a----~~~a~~~~-----l~nv~f~~~Da~~l~~~~~~~ 295 (416)
+.+|||||||+|.++..+++..+ ..+++|+|++..+ .+++...+ ..|++++++|+...+ +
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~----~- 159 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY----P- 159 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC----G-
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC----C-
Confidence 57999999999999999998755 3699999975544 44444444 578999999987631 2
Q ss_pred CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 296 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 296 ~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
..++||.|++..+-++ +++++.+.|||||++++...
T Consensus 160 ~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPD--------------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGCSEEEEEECSCBSS--------------CCHHHHHTEEEEEEEEEEES
T ss_pred cCCCccEEEECCchHH--------------HHHHHHHHhcCCCEEEEEEe
Confidence 2368999998755432 23678999999999999764
No 232
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.93 E-value=2.5e-09 Score=106.14 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=74.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
...+|||||||+|.++..+++++|+.+++..|. ++.|.+.+...+.+||+|+.+|+... | ....|.+++.
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~-----~--~~~~D~~~~~ 251 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD-----P--LPEADLYILA 251 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS-----C--CCCCSEEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccC-----C--CCCceEEEee
Confidence 367999999999999999999999999999995 44444444334567899999998643 2 2346998876
Q ss_pred CCCC-CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNP-DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdp-w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..-. |+ +. ....+|+++++.|+|||++++.
T Consensus 252 ~vlh~~~-d~------~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 252 RVLHDWA-DG------KCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp SSGGGSC-HH------HHHHHHHHHHHHCCTTCEEEEE
T ss_pred eecccCC-HH------HHHHHHHHHHhhCCCCCEEEEE
Confidence 4321 21 11 0137899999999999999885
No 233
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.92 E-value=1.2e-08 Score=102.09 Aligned_cols=121 Identities=9% Similarity=0.012 Sum_probs=86.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||+| |+|.+++.+|+..|..+++|+|++. .|.++++..++.|++++++|+.+.++.. .+++||.|+++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~---~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY---ALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT---TSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh---ccCCccEEEEC
Confidence 67999999 9999999999998888999999754 4455555668889999999998721210 24689999987
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcE-EEEEeCc----HHHHHHHHHHHH-hCCCCc
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGK-VFLQSDI----EEVMLRMKQQFL-EYGKGK 364 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~-l~l~tD~----~~~~~~~~~~~~-~~~~~~ 364 (416)
. |+. ... ...+++++.++|||||+ +++.+.. ......+.+.+. ..++..
T Consensus 249 ~--p~~----~~~---~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 249 P--PET----LEA---IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp C--CSS----HHH---HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred C--CCc----hHH---HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 3 332 111 25899999999999994 3555543 222244556666 666543
No 234
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.91 E-value=2.2e-09 Score=107.00 Aligned_cols=96 Identities=18% Similarity=0.175 Sum_probs=73.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
...+|||||||+|.++..+++++|+.+++++|+ ..+++.++ ..+|++|+.+|+.+- + +.+ |.|++.+.-
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~v~~~~~D~~~~----~--p~~--D~v~~~~vl 269 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP--QFPGVTHVGGDMFKE----V--PSG--DTILMKWIL 269 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--CCTTEEEEECCTTTC----C--CCC--SEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh--hcCCeEEEeCCcCCC----C--CCC--CEEEehHHh
Confidence 468999999999999999999999999999998 55554433 246899999998652 2 233 999887543
Q ss_pred C-CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 310 P-DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 310 p-w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. |. .. ....+|++++++|||||+|++.
T Consensus 270 h~~~-d~------~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 270 HDWS-DQ------HCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp GGSC-HH------HHHHHHHHHHHHSCTTCEEEEE
T ss_pred ccCC-HH------HHHHHHHHHHHHcCCCCEEEEE
Confidence 2 21 11 1137899999999999999885
No 235
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.90 E-value=1.2e-09 Score=105.75 Aligned_cols=99 Identities=16% Similarity=0.092 Sum_probs=68.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEE-EEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGY-FIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~-f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+.++||||||||.++..|+++ +..+++|||++..+++.+.++. +++. +...|+..+..+.+ +..+||.+++...
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~-~rv~~~~~~ni~~l~~~~l--~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD-DRVRSMEQYNFRYAEPVDF--TEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC-TTEEEECSCCGGGCCGGGC--TTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC-cccceecccCceecchhhC--CCCCCCEEEEEee
Confidence 3579999999999999999887 5569999998665554432222 3333 33456655422223 2446999987643
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.+. ..+|.+++|+|||||.+++.
T Consensus 161 f~sl-----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 161 FISL-----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSCG-----------GGTHHHHHHHSCTTCEEEEE
T ss_pred HhhH-----------HHHHHHHHHHcCcCCEEEEE
Confidence 2211 36899999999999999885
No 236
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.90 E-value=1.9e-09 Score=107.47 Aligned_cols=97 Identities=14% Similarity=0.191 Sum_probs=74.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
...+|||||||+|.++..+++++|+.+++++|+ ..+++.+++ .++++|+.+|+.+- + +. +|.|++...-
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~~----~---~~-~D~v~~~~~l 277 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP--LSGIEHVGGDMFAS----V---PQ-GDAMILKAVC 277 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--CTTEEEEECCTTTC----C---CC-EEEEEEESSG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh--cCCCEEEeCCcccC----C---CC-CCEEEEeccc
Confidence 368999999999999999999999999999998 666654432 46899999998652 2 23 8999987543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+..+. ....+|++++++|+|||++++.
T Consensus 278 h~~~d~------~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 278 HNWSDE------KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp GGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCHH------HHHHHHHHHHHhcCCCCEEEEE
Confidence 221111 1137899999999999999986
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.90 E-value=2.3e-08 Score=100.77 Aligned_cols=124 Identities=24% Similarity=0.259 Sum_probs=83.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||+|||+|.+++.+|+. ...++|+|++..++ ++++.+++.+ ++.++|+.++++. ..+.||.|+++
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~-~~~~~D~~~~l~~----~~~~fD~Ii~d 287 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRV-DIRHGEALPTLRG----LEGPFHHVLLD 287 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCC-EEEESCHHHHHHT----CCCCEEEEEEC
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCC-cEEEccHHHHHHH----hcCCCCEEEEC
Confidence 689999999999999999987 34599999865554 4455567763 5779999887532 13449999986
Q ss_pred CCCCCC-CCcchhhhh--hhHHHHHHHHhhccCCcEEEEEeCc-----HHHHHHHHHHHHhCCCC
Q 014919 307 CPNPDF-NRPEHRWRM--VQRSLVEAVSDLLVHDGKVFLQSDI-----EEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 307 fpdpw~-k~~h~krRl--~~~~~l~~i~r~LkpgG~l~l~tD~-----~~~~~~~~~~~~~~~~~ 363 (416)
.|.+ +.+....+. .+..+++.+.++|+|||.|++.+.. +.+.+.+.+.+.+.+..
T Consensus 288 --pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 288 --PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp --CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCC
T ss_pred --CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCe
Confidence 2332 222211111 1358899999999999999976543 22333344455555554
No 238
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.90 E-value=7.3e-09 Score=106.18 Aligned_cols=112 Identities=21% Similarity=0.276 Sum_probs=81.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC-CeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..|||+|||+|..+..+|+..++ .+++|+|++.. +.+++++.+++|++++++|+..+ +..+ .+++||.|+
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~-~~~~--~~~~fD~Vl 335 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKA-PEII--GEEVADKVL 335 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCC-SSSS--CSSCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhc-chhh--ccCCCCEEE
Confidence 4679999999999999999999876 89999997544 44555566888999999999876 2112 347899999
Q ss_pred EECCCC----CCCCcchhh--------hh--hhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNP----DFNRPEHRW--------RM--VQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdp----w~k~~h~kr--------Rl--~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.-|-. +.+.+..++ ++ .+..+|+.+.+.|||||.+++.|
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 863311 111111111 11 23688999999999999999875
No 239
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.89 E-value=6.8e-09 Score=106.63 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=81.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC-CeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|..+..+|+..++ ..++|+|++. .+.+++++.|+. +.++++|+.++ ...+ +++||.|+
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l-~~~~---~~~FD~Il 175 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRAL-AEAF---GTYFHRVL 175 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHH-HHHH---CSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHh-hhhc---cccCCEEE
Confidence 4689999999999999999998764 7999999754 445556667888 99999999887 3222 57899999
Q ss_pred EECCCC----CCCCcchhhh----------hhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNP----DFNRPEHRWR----------MVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdp----w~k~~h~krR----------l~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
++-|-. +.+.+..+.+ -.+.++|+.+.+.|||||+|+++|
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 873310 1111111110 124689999999999999999875
No 240
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.87 E-value=1.6e-08 Score=100.20 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=83.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-C------C-----CcEEEEEcChhhhhhhhhccCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-G------I-----TNGYFIATNATSTFRSIVASYP 297 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-~------l-----~nv~f~~~Da~~l~~~~~~~~~ 297 (416)
++.+||+||||+|.++..+++..+ .++++||+.+.+.+.++++ . + ++++++.+|+..++..... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~-~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK-EG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH-HT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc-cC
Confidence 578999999999999999988755 8999999877666665543 1 2 1699999999998653210 25
Q ss_pred CceeEEEEECCC-CCCCCcchhhhhhhHHHHHHH----HhhccCCcEEEEEeCcH
Q 014919 298 GKLILVSIQCPN-PDFNRPEHRWRMVQRSLVEAV----SDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 298 ~s~D~v~~~fpd-pw~k~~h~krRl~~~~~l~~i----~r~LkpgG~l~l~tD~~ 347 (416)
++||+|++..|+ |.-..+. ++...+|++.+ .++|+|||.+++.+...
T Consensus 266 ~~fDvII~D~~d~P~~~~p~---~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPE---EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCceEEEECCCCcccCcCch---hhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 789999998877 6422221 24556788877 99999999999986544
No 241
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.87 E-value=2.1e-08 Score=96.16 Aligned_cols=129 Identities=12% Similarity=0.046 Sum_probs=81.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEch-HHHHHHHHH---------HhCC-----CcEEEEEcChhhhhhhhhc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL-VTHCRDSLQ---------LSGI-----TNGYFIATNATSTFRSIVA 294 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~-~~~a~~~a~---------~~~l-----~nv~f~~~Da~~l~~~~~~ 294 (416)
.+.+|||||||+|.+++.+|+.. ..+++|+|+ +..+++.++ .+++ .|+++...|..+......+
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 35799999999999999998863 458999999 666655443 2233 2788886654332111110
Q ss_pred -cCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhcc---C--CcEEEEEeCcHH-----HHHHHHHHHHhCC-C
Q 014919 295 -SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLV---H--DGKVFLQSDIEE-----VMLRMKQQFLEYG-K 362 (416)
Q Consensus 295 -~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~Lk---p--gG~l~l~tD~~~-----~~~~~~~~~~~~~-~ 362 (416)
..+++||.|++. |..+... ....+++.+.++|+ | ||.+++...... ......+.+++.| +
T Consensus 158 ~~~~~~fD~Ii~~--dvl~~~~------~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f 229 (281)
T 3bzb_A 158 CTGLQRFQVVLLA--DLLSFHQ------AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGAL 229 (281)
T ss_dssp HHSCSSBSEEEEE--SCCSCGG------GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTE
T ss_pred hccCCCCCEEEEe--CcccChH------HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCE
Confidence 025789999875 3332111 12588999999999 9 998877644321 1234556677888 7
Q ss_pred Cceee
Q 014919 363 GKLVL 367 (416)
Q Consensus 363 ~~~~~ 367 (416)
.....
T Consensus 230 ~v~~~ 234 (281)
T 3bzb_A 230 IAEPW 234 (281)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 64433
No 242
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.87 E-value=3e-09 Score=105.21 Aligned_cols=97 Identities=13% Similarity=0.201 Sum_probs=74.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
...+|||||||+|.++..+++++|+.+++++|+ ..+++.+++ .++++|+.+|+.+- + + .+|.|++...-
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~~----~---p-~~D~v~~~~~l 256 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG--SNNLTYVGGDMFTS----I---P-NADAVLLKYIL 256 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--BTTEEEEECCTTTC----C---C-CCSEEEEESCG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc--CCCcEEEeccccCC----C---C-CccEEEeehhh
Confidence 358999999999999999999999999999999 766665433 46799999998542 2 2 39999987543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccC---CcEEEEE
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVH---DGKVFLQ 343 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~Lkp---gG~l~l~ 343 (416)
....+. ....+|++++++||| ||++++.
T Consensus 257 h~~~d~------~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 257 HNWTDK------DCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp GGSCHH------HHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred ccCCHH------HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 211111 113789999999999 9999885
No 243
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.86 E-value=5.5e-09 Score=92.50 Aligned_cols=107 Identities=14% Similarity=0.099 Sum_probs=78.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+..|||||||. +++|++..+++.+++....+++++++|+.++ + ..++++++||.|++++.-
T Consensus 12 ~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~-~-~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 12 AGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQL-L-QSAHKESSFDIILSGLVP 73 (176)
T ss_dssp TTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGG-G-GGCCCSSCEEEEEECCST
T ss_pred CCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcC-c-cccCCCCCEeEEEECChh
Confidence 478999999996 2489888888877665445799999999886 2 101157899999988765
Q ss_pred CCC-CCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHH---------HHHHHHHHHHhCCC
Q 014919 310 PDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE---------VMLRMKQQFLEYGK 362 (416)
Q Consensus 310 pw~-k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~---------~~~~~~~~~~~~~~ 362 (416)
.|. .+. ..++++++|+|||||+|++...... ..+++.+.+++.||
T Consensus 74 ~~~~~~~--------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHS--------AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCC--------HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCH--------HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 554 221 4899999999999999999632111 14567788899998
No 244
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.86 E-value=3.3e-09 Score=104.78 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=73.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH-HHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD-SLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~-~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
...+|||||||+|.++..+++++|+.+++++|+.....+ +++..+. ++++|+.+|+.+. + + ++|.|++..
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~----~---p-~~D~v~~~~ 255 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLRE----V---P-HADVHVLKR 255 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTC----C---C-CCSEEEEES
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCC----C---C-CCcEEEEeh
Confidence 468999999999999999999999999999998433221 1111233 4699999998621 1 3 899999875
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
.-.+..+. ....+|++++++|||||+|++..
T Consensus 256 vlh~~~d~------~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 256 ILHNWGDE------DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp CGGGSCHH------HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred hccCCCHH------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 43211111 11388999999999999998853
No 245
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.85 E-value=2.3e-08 Score=102.02 Aligned_cols=121 Identities=17% Similarity=0.181 Sum_probs=86.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..|||+|||+|.+++.||+. ..+++|+|++.. |.++++.++++|++|+++|+.+.+.. +++.+++||.|++
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~-~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTK-QPWAKNGFDKVLL 362 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSS-SGGGTTCCSEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhh-hhhhcCCCCEEEE
Confidence 3579999999999999999988 679999997554 44555567888999999999875322 1223578999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCcee
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~ 366 (416)
+- |. ... .++++.+.+ ++|++.++++.+...+.+.. ..+.+.++....
T Consensus 363 dP--Pr-~g~--------~~~~~~l~~-~~p~~ivyvsc~p~tlard~-~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 363 DP--AR-AGA--------AGVMQQIIK-LEPIRIVYVSCNPATLARDS-EALLKAGYTIAR 410 (433)
T ss_dssp CC--CT-TCC--------HHHHHHHHH-HCCSEEEEEESCHHHHHHHH-HHHHHTTCEEEE
T ss_pred CC--CC-ccH--------HHHHHHHHh-cCCCeEEEEECChHHHHhhH-HHHHHCCcEEEE
Confidence 52 22 111 145555543 79999999988776666654 556667776543
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.85 E-value=2.4e-09 Score=103.59 Aligned_cols=117 Identities=9% Similarity=0.040 Sum_probs=79.7
Q ss_pred CCCeEEEEec------cccHHHHHHHHhCC-CCeEEEEchHHHHHHHHHHhCCCcEEE-EEcChhhhhhhhhccCCCcee
Q 014919 230 AQPLVVDIGS------GNGLFLLGMARKRK-DLNFLGLELVTHCRDSLQLSGITNGYF-IATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 230 ~~~~vLDIGC------G~G~~~~~lA~~~p-~~~~iGvD~~~~a~~~a~~~~l~nv~f-~~~Da~~l~~~~~~~~~~s~D 301 (416)
.+.+|||||| |+|. ..+++..| +.+++|+|++.. ++|++| +++|+.++ + .+++||
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~---------v~~v~~~i~gD~~~~-----~-~~~~fD 125 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF---------VSDADSTLIGDCATV-----H-TANKWD 125 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC---------BCSSSEEEESCGGGC-----C-CSSCEE
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC---------CCCCEEEEECccccC-----C-ccCccc
Confidence 4679999999 5576 55677776 689999999764 368899 99999875 2 246899
Q ss_pred EEEEECCCCCCC--C-cchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCC
Q 014919 302 LVSIQCPNPDFN--R-PEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 302 ~v~~~fpdpw~k--~-~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~ 363 (416)
.|+++.+.++.. . .+.......+.+++++.++|||||.|++..-.......+.+.+++++|.
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~ 190 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWW 190 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEE
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCc
Confidence 999876544421 1 1111111235789999999999999999642222223566667776653
No 247
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.84 E-value=3.9e-09 Score=98.78 Aligned_cols=99 Identities=17% Similarity=0.106 Sum_probs=59.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEE-EEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYF-IATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f-~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+.+|||||||+|.++..|+++ ...+++|+|++..+++.+.++. +++.. ...++..+....++ ...+|.+.+...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD-ERVVVMEQFNFRNAVLADFE--QGRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC-TTEEEECSCCGGGCCGGGCC--SCCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC-ccccccccceEEEeCHhHcC--cCCCCEEEEEEE
Confidence 3579999999999999999987 3359999998765555443322 22222 22233222111111 112343333211
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+.. . ..++++++|+|||||.+++.
T Consensus 113 --~~~-l--------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 113 --FIS-L--------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp --SSC-G--------GGTHHHHHHHSCTTCEEEEE
T ss_pred --hhh-H--------HHHHHHHHHhccCCCEEEEE
Confidence 110 0 36899999999999999986
No 248
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.84 E-value=6.3e-09 Score=102.59 Aligned_cols=107 Identities=15% Similarity=0.252 Sum_probs=79.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|.+++. |+ +..+++|+|++..+ .++++.+++ +|++++++|+.++ . ++||.|+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~-------~-~~fD~Vi 263 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV-------D-VKGNRVI 263 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-------C-CCEEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh-------c-CCCcEEE
Confidence 368999999999999999 87 47899999975544 445556677 5899999999876 2 6899998
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
++. |.. . ..+++.+.++|+|||.+++.+-... .+...+.+.+.
T Consensus 264 ~dp--P~~----~------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 264 MNL--PKF----A------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp ECC--TTT----G------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred ECC--cHh----H------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 852 211 1 2688999999999999988644333 44455555554
No 249
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.84 E-value=1.2e-08 Score=97.09 Aligned_cols=126 Identities=15% Similarity=0.124 Sum_probs=85.7
Q ss_pred CCCeEEEEeccccHHHHHHHHh-------CCC-----CeEEEEchH-------H-----------HHHHHHHH-------
Q 014919 230 AQPLVVDIGSGNGLFLLGMARK-------RKD-----LNFLGLELV-------T-----------HCRDSLQL------- 272 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~-------~p~-----~~~iGvD~~-------~-----------~a~~~a~~------- 272 (416)
...+|||||||+|..++.+++. .|+ .+|+++|.. . .|.+..+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3579999999999999887764 674 589999941 1 12222221
Q ss_pred -------hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 273 -------SGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 273 -------~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
.+..|++++.+|+.+.++..-......||.|++ |+|.+++++ ++.++++|+.++++|+|||+|..-|-
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~ifl---D~fsp~~~p--~lw~~~~l~~l~~~L~pGG~l~tysa 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFL---DGFAPAKNP--DMWTQNLFNAMARLARPGGTLATFTS 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEE---CSSCTTTCG--GGCCHHHHHHHHHHEEEEEEEEESCC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEE---CCCCcccCh--hhcCHHHHHHHHHHcCCCcEEEEEeC
Confidence 123578999999999755321000137999865 888665554 46678999999999999999886443
Q ss_pred cHHHHHHHHHHHHhCCCCc
Q 014919 346 IEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~ 364 (416)
.. .+.+.+.+.||..
T Consensus 215 a~----~vrr~L~~aGF~v 229 (257)
T 2qy6_A 215 AG----FVRRGLQEAGFTM 229 (257)
T ss_dssp BH----HHHHHHHHHTEEE
T ss_pred CH----HHHHHHHHCCCEE
Confidence 33 3455667778764
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.83 E-value=3.2e-09 Score=103.47 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=69.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEch----HHHHHHHH--HHhCCCcEEEEEc-ChhhhhhhhhccCCCceeEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL----VTHCRDSL--QLSGITNGYFIAT-NATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~----~~~a~~~a--~~~~l~nv~f~~~-Da~~l~~~~~~~~~~s~D~v 303 (416)
+.+|||||||+|.++..+|++ .+++|+|+ +...+... +..+.+++.|+++ |+..+ ++++||.|
T Consensus 83 g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l-------~~~~fD~V 152 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFI-------PPERCDTL 152 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTS-------CCCCCSEE
T ss_pred CCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccC-------CcCCCCEE
Confidence 579999999999999999987 47999998 33111111 1122367999999 88765 35689999
Q ss_pred EEECCCCCCCCcchhh-hhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 304 SIQCPNPDFNRPEHRW-RMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 304 ~~~fpdpw~k~~h~kr-Rl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
++.++.. ..|+-. .......|+.+.++|||||.|.+.+-
T Consensus 153 ~sd~~~~---~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 153 LCDIGES---SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp EECCCCC---CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred EECCccc---cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 9875422 111100 00001478889999999999998653
No 251
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.83 E-value=5.6e-09 Score=100.39 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=75.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
++.+|||+|||+|.+++.+|+. ...+++++|++.. +.++++.++++| ++++++|+.++. ..+.+|.|+
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~------~~~~~D~Vi 197 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------GENIADRIL 197 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------CCSCEEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc------cccCCCEEE
Confidence 4789999999999999999987 4578999997554 455566778865 999999998762 367899999
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++.| . .. ..|+..+.++|||||.+++-
T Consensus 198 ~~~p--~--~~--------~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 198 MGYV--V--RT--------HEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp ECCC--S--SG--------GGGHHHHHHHEEEEEEEEEE
T ss_pred ECCC--C--cH--------HHHHHHHHHHcCCCCEEEEE
Confidence 8733 1 11 26888899999999999764
No 252
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.81 E-value=2.7e-08 Score=107.39 Aligned_cols=126 Identities=13% Similarity=0.174 Sum_probs=87.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHH----HHHHHhCCC--cEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCR----DSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~----~~a~~~~l~--nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.+.+|||+|||+|.+++.+|+.. ..+++++|++..++ ++++.++++ |++++++|+.++++. ..++||.|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~----~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE----ANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH----CCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh----cCCCccEE
Confidence 36799999999999999999853 34799999865554 445566776 799999999886432 35789999
Q ss_pred EEECCCCCCCCcch-----hhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCC
Q 014919 304 SIQCPNPDFNRPEH-----RWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 304 ~~~fpdpw~k~~h~-----krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~ 363 (416)
+++ .|.+..... ...-.+.++++.+.++|+|||.|++.+....+.. -.+.+.+.++.
T Consensus 614 i~D--PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~-~~~~l~~~g~~ 675 (703)
T 3v97_A 614 FID--PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-DLDGLAKLGLK 675 (703)
T ss_dssp EEC--CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCC-CHHHHHHTTEE
T ss_pred EEC--CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccccc-CHHHHHHcCCc
Confidence 886 233221100 0011246889999999999999999886532221 24566776654
No 253
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.81 E-value=6.2e-09 Score=107.59 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=72.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH---HHHHHHHHhCC-CcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT---HCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~---~a~~~a~~~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||||||+|.+++.+|+ .+..+++|+|++. .|.++++.+++ ++++++++|+.++ + .+++||.|++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~-----~-~~~~fD~Ivs 230 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-----S-LPEQVDIIIS 230 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTC-----C-CSSCEEEEEC
T ss_pred CCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhC-----c-cCCCeEEEEE
Confidence 357999999999999998887 5778999999765 34444556677 5899999999875 2 2468999987
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
+.+.-..... -....+..+.++|||||.+++
T Consensus 231 ~~~~~~~~~e------~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 231 EPMGYMLFNE------RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCHHHHTCH------HHHHHHHHGGGGEEEEEEEES
T ss_pred eCchHhcCcH------HHHHHHHHHHHhcCCCCEEEE
Confidence 5321000000 013566788999999999985
No 254
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.80 E-value=2.1e-08 Score=100.37 Aligned_cols=100 Identities=14% Similarity=0.243 Sum_probs=73.3
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+.+|||||||+|.+++..|++ ...+|+|||. ...|++.++.+++. +|+++++|++++ . .++.+|.|+..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~-----~-lpe~~DvivsE 156 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQA-GARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV-----E-LPEQVDAIVSE 156 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC-----C-CSSCEEEEECC
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee-----c-CCccccEEEee
Confidence 579999999999888766665 3468999995 46677777788886 599999999887 2 25789999764
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
..+... .+. . ..+.++....|+|||||.++-
T Consensus 157 ~~~~~l--~~e--~-~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 157 WMGYGL--LHE--S-MLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCBTTB--TTT--C-SHHHHHHHHHHHEEEEEEEES
T ss_pred cccccc--ccc--c-hhhhHHHHHHhhCCCCceECC
Confidence 222111 010 1 235888889999999998653
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.80 E-value=4.3e-08 Score=99.74 Aligned_cols=104 Identities=16% Similarity=0.234 Sum_probs=76.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+.+|||+|||+|.+++.+|+. ..+++|+|++..+ .++++.++++ ++|+++|+.+++ +.+||.|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~-------~~~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS-------VKGFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC-------CTTCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC-------ccCCCEEEE
Confidence 3679999999999999999987 4699999975544 4455556777 999999998762 228999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHH
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMK 354 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~ 354 (416)
+. |. .. ..+.+++.+. .|+|+|.++++++...+.+.+.
T Consensus 360 dP--Pr-~g-------~~~~~~~~l~-~l~p~givyvsc~p~tlarDl~ 397 (425)
T 2jjq_A 360 DP--PR-AG-------LHPRLVKRLN-REKPGVIVYVSCNPETFARDVK 397 (425)
T ss_dssp CC--CT-TC-------SCHHHHHHHH-HHCCSEEEEEESCHHHHHHHHH
T ss_pred cC--Cc-cc-------hHHHHHHHHH-hcCCCcEEEEECChHHHHhHHh
Confidence 52 21 11 1135666665 5999999999987766655443
No 256
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.79 E-value=2.4e-08 Score=95.62 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=80.4
Q ss_pred CCeEEEEeccc--cHHHHHHHH-hCCCCeEEEEchHHHHHHHHHH----hCCCcEEEEEcChhhhhhhhhccC--CCcee
Q 014919 231 QPLVVDIGSGN--GLFLLGMAR-KRKDLNFLGLELVTHCRDSLQL----SGITNGYFIATNATSTFRSIVASY--PGKLI 301 (416)
Q Consensus 231 ~~~vLDIGCG~--G~~~~~lA~-~~p~~~~iGvD~~~~a~~~a~~----~~l~nv~f~~~Da~~l~~~~~~~~--~~s~D 301 (416)
...+||||||+ +.++..+|+ ..|+++++++|.+..+++.++. .+..+++|+++|+.+. ...++.+ .+++|
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~-~~~l~~~~~~~~~D 157 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP-ASILDAPELRDTLD 157 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH-HHHHTCHHHHTTCC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh-hhhhcccccccccC
Confidence 46899999997 445666665 5799999999976665554432 2234799999999885 2111100 12343
Q ss_pred -----EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe---Cc-HHHHHHHHHHHHhCC
Q 014919 302 -----LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DI-EEVMLRMKQQFLEYG 361 (416)
Q Consensus 302 -----~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t---D~-~~~~~~~~~~~~~~~ 361 (416)
.|+++..-.|...... ...+++++++.|+|||+|.+++ |. ....+.+.+.+...+
T Consensus 158 ~~~p~av~~~avLH~l~d~~~-----p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g 221 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDD-----AVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARN 221 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGC-----HHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTT
T ss_pred cCCcchHHhhhhHhcCCchhh-----HHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcC
Confidence 4667766666433210 1378999999999999999873 22 234455555555544
No 257
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.78 E-value=2.9e-08 Score=99.46 Aligned_cols=98 Identities=10% Similarity=0.088 Sum_probs=78.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHh---------------CCCcEEEEEcChhhhhhh
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLS---------------GITNGYFIATNATSTFRS 291 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~---------------~l~nv~f~~~Da~~l~~~ 291 (416)
+.+|||+|||+|..++.+|++.+..+++++|++.. +.++++.+ +++|++++++|+..++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 68899999999999999999988889999997554 44555666 777899999999887432
Q ss_pred hhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 292 IVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 292 ~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
..++||.|++ ||... ...+++.+.+.|+|||.+++..
T Consensus 128 ----~~~~fD~I~l---DP~~~---------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 ----RHRYFHFIDL---DPFGS---------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp ----STTCEEEEEE---CCSSC---------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccCCCCEEEe---CCCCC---------HHHHHHHHHHhcCCCCEEEEEe
Confidence 1457999985 55321 1378999999999999988863
No 258
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.75 E-value=1.1e-08 Score=101.36 Aligned_cols=96 Identities=20% Similarity=0.272 Sum_probs=73.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
..+|||||||+|.++..+++++|+.+++++|+ ..+++.++ ..++++|+.+|+.+- + + ++|.|++...-.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--~~~~v~~~~~d~~~~----~---~-~~D~v~~~~vlh 262 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT--GNENLNFVGGDMFKS----I---P-SADAVLLKWVLH 262 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC--CCSSEEEEECCTTTC----C---C-CCSEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc--cCCCcEEEeCccCCC----C---C-CceEEEEccccc
Confidence 57999999999999999999999999999998 45554433 246799999998652 2 2 489999885433
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccC---CcEEEEE
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVH---DGKVFLQ 343 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~Lkp---gG~l~l~ 343 (416)
+..+. ....+|++++++|+| ||++++.
T Consensus 263 ~~~d~------~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 263 DWNDE------QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp GSCHH------HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred CCCHH------HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 21111 113889999999999 9999885
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.72 E-value=7.6e-08 Score=95.99 Aligned_cols=111 Identities=15% Similarity=0.173 Sum_probs=73.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCCCcEEEEEcChhhhhhhhhccC----------
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGITNGYFIATNATSTFRSIVASY---------- 296 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~---------- 296 (416)
+..|||+|||+|.+++.+|+. ..+++|+|++.. |.++++.++++|++|+++|+.++++......
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 467999999999999999986 358999997554 4555566788999999999988754321000
Q ss_pred -CCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe-CcHHHHHHHHHHHH
Q 014919 297 -PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS-DIEEVMLRMKQQFL 358 (416)
Q Consensus 297 -~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t-D~~~~~~~~~~~~~ 358 (416)
+.+||.|++. .|.. .+..++.+.|+++|.+++.+ +...+.+.. ..+.
T Consensus 292 ~~~~fD~Vv~d--PPr~------------g~~~~~~~~l~~~g~ivyvsc~p~t~ard~-~~l~ 340 (369)
T 3bt7_A 292 KSYQCETIFVD--PPRS------------GLDSETEKMVQAYPRILYISCNPETLCKNL-ETLS 340 (369)
T ss_dssp GGCCEEEEEEC--CCTT------------CCCHHHHHHHTTSSEEEEEESCHHHHHHHH-HHHH
T ss_pred ccCCCCEEEEC--cCcc------------ccHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHh
Confidence 1379999874 2211 12234555666777766654 444444433 3444
No 260
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.72 E-value=2.1e-08 Score=96.52 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=56.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH----hCC-CcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL----SGI-TNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~----~~l-~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..|||||||+|.++..|++.. .+++|+|++..+++.+++ .+. +|++++++|+..+ + ..++|.|+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~-----~--~~~fD~vv 98 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT-----D--LPFFDTCV 98 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS-----C--CCCCSEEE
T ss_pred CCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc-----c--chhhcEEE
Confidence 36799999999999999999984 589999986655554433 333 5899999999876 2 23799999
Q ss_pred EECCCCC
Q 014919 305 IQCPNPD 311 (416)
Q Consensus 305 ~~fpdpw 311 (416)
.+.|..|
T Consensus 99 ~nlpy~~ 105 (285)
T 1zq9_A 99 ANLPYQI 105 (285)
T ss_dssp EECCGGG
T ss_pred EecCccc
Confidence 9976554
No 261
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.69 E-value=7.5e-08 Score=96.73 Aligned_cols=111 Identities=16% Similarity=0.210 Sum_probs=79.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCC--------------------------------------CCeEEEEchHH----HHHH
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK--------------------------------------DLNFLGLELVT----HCRD 268 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p--------------------------------------~~~~iGvD~~~----~a~~ 268 (416)
+..+||.+||+|.+++.+|.... ..+++|+|++. .|.+
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 57899999999999999987632 25799999744 4555
Q ss_pred HHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccC--CcEEEEEeC
Q 014919 269 SLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH--DGKVFLQSD 345 (416)
Q Consensus 269 ~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkp--gG~l~l~tD 345 (416)
+++.+++. +++|.++|+.++ + .+.++|.|++| .|+......+.. ...+.+++.+.||+ |+.+++.|.
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l-----~-~~~~~D~Iv~N--PPyg~rl~~~~~--l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQF-----K-SEDEFGFIITN--PPYGERLEDKDS--VKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGC-----C-CSCBSCEEEEC--CCCCCSHHHHHH--HHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHcCCCCceEEEECChhhc-----C-cCCCCcEEEEC--CCCcCccCCHHH--HHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 56667876 799999999886 2 24689999987 455322111111 13566667777776 899988887
Q ss_pred cHHHHH
Q 014919 346 IEEVML 351 (416)
Q Consensus 346 ~~~~~~ 351 (416)
+..+..
T Consensus 346 ~~~l~~ 351 (385)
T 3ldu_A 346 YEDFEY 351 (385)
T ss_dssp CTTHHH
T ss_pred CHHHHH
Confidence 766543
No 262
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.68 E-value=1.2e-07 Score=95.19 Aligned_cols=111 Identities=13% Similarity=0.083 Sum_probs=78.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC--------------------------------------CeEEEEchHH----HHHH
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD--------------------------------------LNFLGLELVT----HCRD 268 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~--------------------------------------~~~iGvD~~~----~a~~ 268 (416)
+..+||.+||+|.++++.|....+ .+++|+|++. .|.+
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 578999999999999998875433 5699999744 4555
Q ss_pred HHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccC--CcEEEEEeC
Q 014919 269 SLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH--DGKVFLQSD 345 (416)
Q Consensus 269 ~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkp--gG~l~l~tD 345 (416)
+++..++.+ ++|+++|+.++ + .+.++|.|++| .||......+.. ...+.+.+.+.||+ ||.+++.|.
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l-----~-~~~~fD~Iv~N--PPYG~rl~~~~~--l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDF-----K-TNKINGVLISN--PPYGERLLDDKA--VDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGC-----C-CCCCSCEEEEC--CCCTTTTSCHHH--HHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHcCCCCceEEEECChHHC-----C-ccCCcCEEEEC--CchhhccCCHHH--HHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 666678864 99999999887 2 24589999988 455322111111 13566667777776 999998887
Q ss_pred cHHHHH
Q 014919 346 IEEVML 351 (416)
Q Consensus 346 ~~~~~~ 351 (416)
+..+..
T Consensus 345 ~~~l~~ 350 (384)
T 3ldg_A 345 DTDFEQ 350 (384)
T ss_dssp CTTHHH
T ss_pred CHHHHH
Confidence 766543
No 263
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.68 E-value=8.8e-08 Score=96.49 Aligned_cols=111 Identities=15% Similarity=0.104 Sum_probs=77.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC--------------------------------------CeEEEEchHH----HHHH
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD--------------------------------------LNFLGLELVT----HCRD 268 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~--------------------------------------~~~iGvD~~~----~a~~ 268 (416)
+..+||.+||+|.+++++|....+ .+++|+|++. .|.+
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 578999999999999998876433 5699999744 4555
Q ss_pred HHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccC--CcEEEEEeC
Q 014919 269 SLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH--DGKVFLQSD 345 (416)
Q Consensus 269 ~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkp--gG~l~l~tD 345 (416)
+++.+++. +++|+++|+.++ + .+.++|.|++| .||......+.. ...+.+.+.+.||+ ||.+++.|.
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~-----~-~~~~fD~Iv~N--PPYg~rl~~~~~--l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADF-----Q-TEDEYGVVVAN--PPYGERLEDEEA--VRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGC-----C-CCCCSCEEEEC--CCCCCSHHHHHH--HHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHcCCCCceEEEECChHhC-----C-CCCCCCEEEEC--CCCccccCCchh--HHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 66667876 499999999886 2 24689999987 455322111111 13455666666666 999998887
Q ss_pred cHHHHH
Q 014919 346 IEEVML 351 (416)
Q Consensus 346 ~~~~~~ 351 (416)
+..+..
T Consensus 352 ~~~l~~ 357 (393)
T 3k0b_A 352 YELFEE 357 (393)
T ss_dssp CTTHHH
T ss_pred CHHHHH
Confidence 776543
No 264
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.67 E-value=3.8e-08 Score=97.08 Aligned_cols=125 Identities=10% Similarity=0.091 Sum_probs=85.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC-----CeEEEEchHHHHHH----HHHHhCCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD-----LNFLGLELVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~-----~~~iGvD~~~~a~~----~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
..+|||+|||+|.++..+++..+. .+++|+|++..+.+ ++...++ ++.++++|+.... ..+.||
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~------~~~~fD 203 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL------LVDPVD 203 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC------CCCCEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc------ccCCcc
Confidence 578999999999999999988764 78999997555444 3344566 7899999986531 357899
Q ss_pred EEEEECCCCCCCCcchhhh----------hhhHHHHHHHHhhccCCcEEEEEeCcH----HHHHHHHHHHHhCCC
Q 014919 302 LVSIQCPNPDFNRPEHRWR----------MVQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLEYGK 362 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krR----------l~~~~~l~~i~r~LkpgG~l~l~tD~~----~~~~~~~~~~~~~~~ 362 (416)
.|+.|.|-.+.......+| -.+..|++.+.+.|+|||++.+.+.+. .....+++.+.+.++
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCe
Confidence 9999944222111100000 012368999999999999999886221 224556666666544
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.60 E-value=1.6e-07 Score=94.51 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=77.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC-CeEEEEchHHH----HHHHHHHhCCCc--EEEEEcChhhhhh-hhhccCCCceeE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVTH----CRDSLQLSGITN--GYFIATNATSTFR-SIVASYPGKLIL 302 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~~----a~~~a~~~~l~n--v~f~~~Da~~l~~-~~~~~~~~s~D~ 302 (416)
+.+|||++||+|.+++.+|++.++ ..++++|++.. +.++++.++++| ++++++|+.+++. . ..+.||.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~----~~~~fD~ 128 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE----WGFGFDY 128 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC----CSSCEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh----hCCCCcE
Confidence 578999999999999999997654 68999997554 455566778877 9999999988753 2 2457999
Q ss_pred EEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 303 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 303 v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
|++ ||. ... ..+++.+.+.|+|||.|++...
T Consensus 129 V~l---DP~-g~~--------~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 129 VDL---DPF-GTP--------VPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp EEE---CCS-SCC--------HHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEE---CCC-cCH--------HHHHHHHHHHhCCCCEEEEEec
Confidence 987 552 111 3789999999999999998753
No 266
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.56 E-value=5.9e-08 Score=94.07 Aligned_cols=73 Identities=15% Similarity=0.196 Sum_probs=53.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..|||||||+|.++..|+++ ..+++|+|++..+++ ++...+.+|++++++|+..+ + ..++|.|++
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~-----~--~~~~D~Vv~ 112 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT-----V--FPKFDVCTA 112 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS-----C--CCCCSEEEE
T ss_pred CcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC-----C--cccCCEEEE
Confidence 3679999999999999999987 469999997555444 34445678999999999876 2 347999999
Q ss_pred ECCCCC
Q 014919 306 QCPNPD 311 (416)
Q Consensus 306 ~fpdpw 311 (416)
+.|..|
T Consensus 113 n~py~~ 118 (299)
T 2h1r_A 113 NIPYKI 118 (299)
T ss_dssp ECCGGG
T ss_pred cCCccc
Confidence 865443
No 267
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.56 E-value=1.8e-07 Score=98.58 Aligned_cols=100 Identities=16% Similarity=0.180 Sum_probs=70.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+-+|||||||.|.++..||+. +++|+|||+++.+++ .+.+.+..|+.|.+++++++.. .+ .+++||+|++.
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~--~~~~fD~v~~~ 141 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIA-AL--EEGEFDLAIGL 141 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHH-HC--CTTSCSEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhh-hc--cCCCccEEEEC
Confidence 468999999999999999998 789999997655444 4445566689999999998843 22 47899999876
Q ss_pred CCCCCCCCcchhhhhhhH---HHHHHHHhhccCCcEEEEEe
Q 014919 307 CPNPDFNRPEHRWRMVQR---SLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~---~~l~~i~r~LkpgG~l~l~t 344 (416)
-. -|| +.++ ..+..+.+.|+++|..++.+
T Consensus 142 e~------~eh---v~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 142 SV------FHH---IVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp SC------HHH---HHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred cc------hhc---CCCHHHHHHHHHHHHHhccccceeeEE
Confidence 21 121 1111 22445667788887766543
No 268
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.55 E-value=5.9e-07 Score=87.54 Aligned_cols=112 Identities=9% Similarity=-0.001 Sum_probs=76.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHH----HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVT----HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~----~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+.+|||+|||+|..+..+|+.. +...++|+|++. .+.+++++.++.|++++++|+.++.. ..+ ...+||.|+
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~-~~~-~~~~fD~Vl 179 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP-SDP-RYHEVHYIL 179 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT-TCG-GGTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc-ccc-ccCCCCEEE
Confidence 36799999999999999999874 568999999754 44555666788999999999987621 100 015799998
Q ss_pred EECCCC----CCCCcch-------hhh-----hhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNP----DFNRPEH-------RWR-----MVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdp----w~k~~h~-------krR-----l~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.-|-. +.+.++. ..+ -.+.++|+...+.|+ ||+|+.+|
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 752210 1010000 011 124578888888887 99988875
No 269
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.53 E-value=1.5e-07 Score=96.23 Aligned_cols=109 Identities=18% Similarity=0.176 Sum_probs=76.7
Q ss_pred CCeEEEEeccccHHHHHHHHhC-------------CCCeEEEEchHHHHHH----HHHHhCCC--cEEEEEcChhhhhhh
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR-------------KDLNFLGLELVTHCRD----SLQLSGIT--NGYFIATNATSTFRS 291 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~-------------p~~~~iGvD~~~~a~~----~a~~~~l~--nv~f~~~Da~~l~~~ 291 (416)
+.+|||.|||+|.+++.+++.. +..+++|+|+...+.+ ++..+++. ++.+.++|+...
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~--- 248 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK--- 248 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS---
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC---
Confidence 5689999999999999988753 4578999997554443 34446765 788999998765
Q ss_pred hhccCCCceeEEEEECCCCCCCCcch-----hhh------hhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 292 IVASYPGKLILVSIQCPNPDFNRPEH-----RWR------MVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 292 ~~~~~~~s~D~v~~~fpdpw~k~~h~-----krR------l~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
+ ....||.|+.| .|+...... +.. -.+..|++.+.+.|||||++.+.+...
T Consensus 249 --~-~~~~fD~Iv~N--PPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 249 --E-PSTLVDVILAN--PPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp --C-CSSCEEEEEEC--CCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred --c-ccCCcCEEEEC--CCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 2 23489999998 344221110 000 012489999999999999998877543
No 270
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.46 E-value=4.6e-07 Score=85.76 Aligned_cols=118 Identities=9% Similarity=0.003 Sum_probs=83.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH----HHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~----~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
...|||||||+|-+++.++...|..+|+|+|+.+.+++ ++..+|+. .++...|...- + +++.+|++.++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~-----~-p~~~~DvaL~l 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLED-----R-LDEPADVTLLL 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTS-----C-CCSCCSEEEET
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeeccc-----C-CCCCcchHHHH
Confidence 67999999999999999999999999999998655544 44455655 78888887653 1 47889999886
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc-----------HHHHHHHHHHHHhCCCC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-----------EEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~-----------~~~~~~~~~~~~~~~~~ 363 (416)
-.-|.. ..+.| ...+ ++.+.|+|+|.++- .|. +.|.+++.+.+.+.++.
T Consensus 206 kti~~L-e~q~k-----g~g~-~ll~aL~~~~vvVS-fp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 206 KTLPCL-ETQQR-----GSGW-EVIDIVNSPNIVVT-FPTKSLGQRSKGMFQNYSQSFESQARERSCR 265 (281)
T ss_dssp TCHHHH-HHHST-----THHH-HHHHHSSCSEEEEE-EECC-------CHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHh-hhhhh-----HHHH-HHHHHhCCCCEEEe-ccchhhcCCCcchhhHHHHHHHHHHHhcCCc
Confidence 222211 01111 1344 89999999998764 333 45666666666666764
No 271
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.40 E-value=4.1e-09 Score=99.07 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=69.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccC-CCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASY-PGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~-~~s~D~v~~~ 306 (416)
.+..|||||||+|.++..+++.. .+++|+|++..+.+.++++ ...|++++++|+.++ +++ +++| .|+.|
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~-----~~~~~~~f-~vv~n 100 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF-----QFPNKQRY-KIVGN 100 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT-----TCCCSSEE-EEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhc-----CcccCCCc-EEEEe
Confidence 36789999999999999999984 7999999865544433221 346899999999886 223 3678 67777
Q ss_pred CCCCCCCCcchhhhh-----hhHHHH----HHHHhhccCCcEEEEEe
Q 014919 307 CPNPDFNRPEHRWRM-----VQRSLV----EAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 307 fpdpw~k~~h~krRl-----~~~~~l----~~i~r~LkpgG~l~l~t 344 (416)
. |+......-.++ ....++ +.+.|+|+|||.+.+.+
T Consensus 101 ~--Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 101 I--PYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp C--CSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred C--CccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 4 333221100000 001223 66889999999877643
No 272
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.36 E-value=7.7e-07 Score=86.15 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH--hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL--SGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~--~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..|||||||+|.++..|+++ ..+++|+|++..+.+.+++ .+.+|++++++|+..+ ++++.++|.|+.|.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~-----~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV-----DLNKLDFNKVVANL 122 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS-----CGGGSCCSEEEEEC
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC-----CcccCCccEEEEeC
Confidence 3679999999999999999998 5799999974433333221 1457999999999876 22355799999995
Q ss_pred C
Q 014919 308 P 308 (416)
Q Consensus 308 p 308 (416)
|
T Consensus 123 P 123 (295)
T 3gru_A 123 P 123 (295)
T ss_dssp C
T ss_pred c
Confidence 5
No 273
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.36 E-value=6.9e-07 Score=86.77 Aligned_cols=77 Identities=6% Similarity=0.055 Sum_probs=59.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH----hCCCcEEEEEcChhhhhhhhhcc-CCCceeEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL----SGITNGYFIATNATSTFRSIVAS-YPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~----~~l~nv~f~~~Da~~l~~~~~~~-~~~s~D~v~ 304 (416)
.+.+|||+|||+|.++..++++.|+.+++|+|.+..+++.+++ .+ .|++|+++|+.++ +..++. ...+||.|+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l-~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREA-DFLLKTLGIEKVDGIL 103 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGH-HHHHHHTTCSCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHH-HHHHHhcCCCCCCEEE
Confidence 3679999999999999999999988999999987666655543 34 6899999999886 322210 125799998
Q ss_pred EECC
Q 014919 305 IQCP 308 (416)
Q Consensus 305 ~~fp 308 (416)
+..+
T Consensus 104 ~D~g 107 (301)
T 1m6y_A 104 MDLG 107 (301)
T ss_dssp EECS
T ss_pred EcCc
Confidence 8643
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.31 E-value=7.4e-07 Score=84.59 Aligned_cols=71 Identities=18% Similarity=0.113 Sum_probs=55.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH-------HHHHHHH----HhCCCc-EEEEEcChhhhhhhhhccCC-
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT-------HCRDSLQ----LSGITN-GYFIATNATSTFRSIVASYP- 297 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~-------~a~~~a~----~~~l~n-v~f~~~Da~~l~~~~~~~~~- 297 (416)
+.+|||+|||+|.+++.+|+. ..+++|+|++. .+++.++ .+++.| ++|+++|+.++++. + ++
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~-~--~~~ 158 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPA-L--VKT 158 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHH-H--HHH
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHh-h--hcc
Confidence 578999999999999999996 57899999866 6666553 345545 99999999987432 2 23
Q ss_pred -CceeEEEEE
Q 014919 298 -GKLILVSIQ 306 (416)
Q Consensus 298 -~s~D~v~~~ 306 (416)
++||.|+++
T Consensus 159 ~~~fD~V~~d 168 (258)
T 2r6z_A 159 QGKPDIVYLD 168 (258)
T ss_dssp HCCCSEEEEC
T ss_pred CCCccEEEEC
Confidence 689999886
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.30 E-value=2.6e-06 Score=91.83 Aligned_cols=113 Identities=16% Similarity=0.097 Sum_probs=76.3
Q ss_pred CCeEEEEeccccHHHHHHHHh------------------------------------------CCCCeEEEEchH----H
Q 014919 231 QPLVVDIGSGNGLFLLGMARK------------------------------------------RKDLNFLGLELV----T 264 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~------------------------------------------~p~~~~iGvD~~----~ 264 (416)
+..+||.+||+|.++++.|.. .++.+++|+|+. .
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 578999999999999998864 234689999964 4
Q ss_pred HHHHHHHHhCCCc-EEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHH---HHHHHhhccCCcEE
Q 014919 265 HCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSL---VEAVSDLLVHDGKV 340 (416)
Q Consensus 265 ~a~~~a~~~~l~n-v~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~---l~~i~r~LkpgG~l 340 (416)
.|+++++..|+.+ ++|.++|+.++.. |...+++|.|++| .||- .+...... ...+ +.+..+.+.|||.+
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~~~---~~~~~~~d~Iv~N--PPYG-~Rlg~~~~-l~~ly~~l~~~lk~~~~g~~~ 343 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQLTN---PLPKGPYGTVLSN--PPYG-ERLDSEPA-LIALHSLLGRIMKNQFGGWNL 343 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGCCC---SCTTCCCCEEEEC--CCCC-C---CCHH-HHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHcCCCCceEEEECChhhCcc---ccccCCCCEEEeC--CCcc-ccccchhH-HHHHHHHHHHHHHhhCCCCeE
Confidence 5556666778876 9999999988621 1123489999998 4552 22111111 1233 34444555689999
Q ss_pred EEEeCcHHHH
Q 014919 341 FLQSDIEEVM 350 (416)
Q Consensus 341 ~l~tD~~~~~ 350 (416)
++.|.+..+.
T Consensus 344 ~ilt~~~~l~ 353 (703)
T 3v97_A 344 SLFSASPDLL 353 (703)
T ss_dssp EEEESCHHHH
T ss_pred EEEeCCHHHH
Confidence 9998877653
No 276
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.30 E-value=3.2e-06 Score=79.20 Aligned_cols=96 Identities=15% Similarity=-0.039 Sum_probs=67.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH----HhCCCcEEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ----LSGITNGYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~----~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
....|||||||.|-+++.++ |...|+|+|++..+++.++ .++ .+.++..+|.... + .++++|.+++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~-----~-~~~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCA-----P-PAEAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTS-----C-CCCBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccC-----C-CCCCcchHHH
Confidence 36799999999999988877 8999999998665555443 334 6789999998765 2 3679999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
+- .-|+-.+.-....+ .+.+.|++++.++-
T Consensus 175 lk------~lh~LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 175 FK------LLPLLEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp ES------CHHHHHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HH------HHHHhhhhchhhHH-HHHHHhcCCCEEEE
Confidence 72 22221111111333 77779999977654
No 277
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.28 E-value=4.3e-06 Score=78.43 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=54.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCC-CceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYP-GKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~-~s~D~v~~~ 306 (416)
.+..|||||||+|.++..++++. .+++|+|++..+++.++++ ..+|++++++|+.++ ++++ ..+ .|+.|
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~-----~~~~~~~~-~vv~n 101 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF-----KFPKNQSY-KIFGN 101 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC-----CCCSSCCC-EEEEE
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC-----CcccCCCe-EEEEe
Confidence 36789999999999999999985 6899999877776665543 246899999999886 2232 345 46677
Q ss_pred CC
Q 014919 307 CP 308 (416)
Q Consensus 307 fp 308 (416)
.|
T Consensus 102 lP 103 (244)
T 1qam_A 102 IP 103 (244)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.26 E-value=3.9e-06 Score=80.91 Aligned_cols=124 Identities=13% Similarity=0.162 Sum_probs=91.8
Q ss_pred CCCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH------h---CCCcEEEEEcChhhhhhhhhccCCCc
Q 014919 229 PAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL------S---GITNGYFIATNATSTFRSIVASYPGK 299 (416)
Q Consensus 229 ~~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~------~---~l~nv~f~~~Da~~l~~~~~~~~~~s 299 (416)
++..+||=||-|.|..+.++++..|..+++.||+.....+.+++ . .-++++++.+|+..++.. ..++
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~----~~~~ 157 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ----TSQT 157 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC----SSCC
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh----cccc
Confidence 45789999999999999999988777899999974433333221 1 235799999999988642 4678
Q ss_pred eeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc----HHHHHHHHHHHHhC
Q 014919 300 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 360 (416)
Q Consensus 300 ~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~----~~~~~~~~~~~~~~ 360 (416)
+|+|++-.+||+-.. ..+...+|++.++++|+|||.+..++.. .+.+..+.+.+.+.
T Consensus 158 yDvIi~D~~dp~~~~----~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~ 218 (294)
T 3o4f_A 158 FDVIISDCTDPIGPG----ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY 218 (294)
T ss_dssp EEEEEESCCCCCCTT----CCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcCCCc----hhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhh
Confidence 999999888887322 2467789999999999999999987532 22334455555554
No 279
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.22 E-value=1.9e-06 Score=81.70 Aligned_cols=74 Identities=20% Similarity=0.088 Sum_probs=54.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhh-hhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTF-RSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~-~~~~~~~~~s~D~v~~~ 306 (416)
.+..|||||||+|.++..|+++. .+++|+|++..+.+.++++ ...|++++++|+.++. ++.+ ..+++| |+.|
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~--~~~~~~-vv~N 103 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVK--TDKPLR-VVGN 103 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSC--CSSCEE-EEEE
T ss_pred CcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhc--cCCCeE-EEec
Confidence 46789999999999999999874 6999999876666555432 2578999999998861 1111 135688 7778
Q ss_pred CC
Q 014919 307 CP 308 (416)
Q Consensus 307 fp 308 (416)
.|
T Consensus 104 lP 105 (255)
T 3tqs_A 104 LP 105 (255)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.22 E-value=5.9e-06 Score=79.35 Aligned_cols=99 Identities=11% Similarity=0.050 Sum_probs=75.6
Q ss_pred CCeEEEEeccccHHHHHHHHhC-----CCCeEEEEch------------------------------HHHHHHHHHHhCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR-----KDLNFLGLEL------------------------------VTHCRDSLQLSGI 275 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~-----p~~~~iGvD~------------------------------~~~a~~~a~~~~l 275 (416)
...|||+||..|.+++.||+.. |+.+++++|. .+.++++.++.++
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 5799999999999999998764 5889999993 1235566667787
Q ss_pred --CcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 276 --TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 276 --~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
++++++.+|+.+.++. + +++++|+|++-. | ... -...+|+.+...|+|||.+++
T Consensus 187 ~~~~I~li~Gda~etL~~-~--~~~~~d~vfIDa-D-----~y~----~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPT-A--PIDTLAVLRMDG-D-----LYE----STWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp CSTTEEEEESCHHHHSTT-C--CCCCEEEEEECC-C-----SHH----HHHHHHHHHGGGEEEEEEEEE
T ss_pred CcCceEEEEeCHHHHHhh-C--CCCCEEEEEEcC-C-----ccc----cHHHHHHHHHhhcCCCEEEEE
Confidence 6899999999887653 2 357899998842 1 110 123789999999999999887
No 281
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.21 E-value=4.5e-06 Score=78.74 Aligned_cols=74 Identities=20% Similarity=0.180 Sum_probs=55.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..|||||||+|.++..++++ +..+++|+|++..+.+.++++...|++++++|+..+ + ++...+.+ .|+.|.|
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~-~--~~~~~~~~-~vv~NlP 104 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKF-P--FCSLGKEL-KVVGNLP 104 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTC-C--GGGSCSSE-EEEEECC
T ss_pred CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhC-C--hhHccCCc-EEEEECc
Confidence 3679999999999999999987 557999999988888777655445899999999886 1 11011233 6777744
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.19 E-value=2.5e-06 Score=86.06 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=55.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
+.+|||+|||+|..++.||+. ..+++|+|++.. |.++++.. +++|++++++|+.+.++. + .+++||.|+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~-~--~~~~fDvV~ 168 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPL-I--KTFHPDYIY 168 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHH-H--HHHCCSEEE
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhh-c--cCCCceEEE
Confidence 689999999999999999987 469999997544 44555555 788999999999886432 1 135799998
Q ss_pred EE
Q 014919 305 IQ 306 (416)
Q Consensus 305 ~~ 306 (416)
++
T Consensus 169 lD 170 (410)
T 3ll7_A 169 VD 170 (410)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 283
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.18 E-value=2.6e-06 Score=89.25 Aligned_cols=124 Identities=19% Similarity=0.187 Sum_probs=82.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCC------------------CCeEEEEchHHHHHHH----HHHhCCCc-----EEEEEc
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK------------------DLNFLGLELVTHCRDS----LQLSGITN-----GYFIAT 283 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p------------------~~~~iGvD~~~~a~~~----a~~~~l~n-----v~f~~~ 283 (416)
+.+|+|.+||+|.+++.+++... ..+++|+|+...+.+. +..+++.+ +.+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 57899999999999999887521 2479999975554443 33456665 788999
Q ss_pred ChhhhhhhhhccCCCceeEEEEECCCCCCCCcch--hh------hhhhHHHHHHHHhhccCCcEEEEEeCcHHH-----H
Q 014919 284 NATSTFRSIVASYPGKLILVSIQCPNPDFNRPEH--RW------RMVQRSLVEAVSDLLVHDGKVFLQSDIEEV-----M 350 (416)
Q Consensus 284 Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~--kr------Rl~~~~~l~~i~r~LkpgG~l~l~tD~~~~-----~ 350 (416)
|+.... .. ....||.|+.| .||...... +. .-....|++.+.+.|+|||++.+.+.+..+ .
T Consensus 250 DtL~~~--~~--~~~~fD~Vv~N--PPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~ 323 (541)
T 2ar0_A 250 NTLGSD--GE--NLPKAHIVATN--PPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKG 323 (541)
T ss_dssp CTTSHH--HH--TSCCEEEEEEC--CCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHH
T ss_pred CCcccc--cc--cccCCeEEEEC--CCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHH
Confidence 986641 11 35689999998 444322110 00 011347999999999999999988765433 3
Q ss_pred HHHHHHHHhC
Q 014919 351 LRMKQQFLEY 360 (416)
Q Consensus 351 ~~~~~~~~~~ 360 (416)
..+++.+.+.
T Consensus 324 ~~iR~~L~~~ 333 (541)
T 2ar0_A 324 TDIRRDLMDK 333 (541)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 3455555443
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.17 E-value=5e-06 Score=89.63 Aligned_cols=124 Identities=11% Similarity=0.111 Sum_probs=81.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCC---CCeEEEEchHHHHHHHH--H----H----hCCCcEEEEEcChhhhhhhhhccCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK---DLNFLGLELVTHCRDSL--Q----L----SGITNGYFIATNATSTFRSIVASYP 297 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p---~~~~iGvD~~~~a~~~a--~----~----~~l~nv~f~~~Da~~l~~~~~~~~~ 297 (416)
+.+|||.|||+|.+++.+++..+ ..+++|+|+...+.+.+ + . ++..+..+...|.... . .. ..
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~-~-~~--~~ 397 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSL-N-PE--DF 397 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGC-C-GG--GG
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcc-c-cc--cc
Confidence 67999999999999999998875 45899999754443333 1 1 2333445666666543 1 11 24
Q ss_pred CceeEEEEECCCCCCCCcc--hh-----hhh----------------hhHHHHHHHHhhccCCcEEEEEeCcHHH-----
Q 014919 298 GKLILVSIQCPNPDFNRPE--HR-----WRM----------------VQRSLVEAVSDLLVHDGKVFLQSDIEEV----- 349 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~~h--~k-----rRl----------------~~~~~l~~i~r~LkpgG~l~l~tD~~~~----- 349 (416)
..||.|..| .||..... .. +|+ ....|++.+.+.|+|||++.+.+....+
T Consensus 398 ~kFDVVIgN--PPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~ 475 (878)
T 3s1s_A 398 ANVSVVVMN--PPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGN 475 (878)
T ss_dssp TTEEEEEEC--CBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSH
T ss_pred CCCCEEEEC--CCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCCh
Confidence 689999998 55532110 00 011 1346899999999999999998766544
Q ss_pred -HHHHHHHHHhC
Q 014919 350 -MLRMKQQFLEY 360 (416)
Q Consensus 350 -~~~~~~~~~~~ 360 (416)
...+++.+.+.
T Consensus 476 ~~kkLRk~LLe~ 487 (878)
T 3s1s_A 476 ESKAFREFLVGN 487 (878)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHhC
Confidence 35566655443
No 285
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.13 E-value=2.2e-06 Score=82.31 Aligned_cols=59 Identities=17% Similarity=0.039 Sum_probs=47.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC--CeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD--LNFLGLELVTHCRDSLQLSGITNGYFIATNATST 288 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~--~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l 288 (416)
.+..|||||||+|.++..|+++.+. .+++|+|++..+++.++++...|++++++|+..+
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 4679999999999999999998653 4599999877666655443146899999999886
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.12 E-value=1.4e-05 Score=83.67 Aligned_cols=128 Identities=17% Similarity=0.177 Sum_probs=86.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhC---CCCeEEEEchHHHHH----HHHHHhCC--CcEEEEEcChhhhhhhhhccCCCce
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR---KDLNFLGLELVTHCR----DSLQLSGI--TNGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~---p~~~~iGvD~~~~a~----~~a~~~~l--~nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
.+.+|+|.+||+|.+++.+++.. +..+++|+|+...+. .++..+++ +++.+.++|.... + +-......|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~-d-~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDE-D-WPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTS-C-SCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecc-c-ccccccccc
Confidence 36799999999999999998874 467999999754443 33445677 5789999998653 1 000135789
Q ss_pred eEEEEECCCCCCCCcc------hhhhh-----------hhHHHHHHHHhhcc-CCcEEEEEeCcHHH-----HHHHHHHH
Q 014919 301 ILVSIQCPNPDFNRPE------HRWRM-----------VQRSLVEAVSDLLV-HDGKVFLQSDIEEV-----MLRMKQQF 357 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h------~krRl-----------~~~~~l~~i~r~Lk-pgG~l~l~tD~~~~-----~~~~~~~~ 357 (416)
|.|+.| .||..... ...|. .+-.|++.+.+.|+ |||++.+.+.+..+ ...+++.+
T Consensus 299 D~IvaN--PPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~L 376 (542)
T 3lkd_A 299 DGVLMN--PPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKAL 376 (542)
T ss_dssp SEEEEC--CCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHH
T ss_pred cEEEec--CCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHH
Confidence 999998 44432110 00111 02358999999999 99999888765544 24466666
Q ss_pred HhCC
Q 014919 358 LEYG 361 (416)
Q Consensus 358 ~~~~ 361 (416)
.+..
T Consensus 377 le~~ 380 (542)
T 3lkd_A 377 LEEG 380 (542)
T ss_dssp HHTT
T ss_pred HhCC
Confidence 5554
No 287
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.10 E-value=3.4e-06 Score=80.64 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=53.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-CCCcEEEEEcChhhhhhhhhccCC-CceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-GITNGYFIATNATSTFRSIVASYP-GKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-~l~nv~f~~~Da~~l~~~~~~~~~-~s~D~v~~~fp 308 (416)
+ .|||||||+|.++..|+++. .+++|+|++..+.+.++++ ...|++++++|+..+ ++++ ..+|.|+.|.|
T Consensus 48 ~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~-----~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 48 G-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLY-----PWEEVPQGSLLVANLP 119 (271)
T ss_dssp S-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGS-----CGGGSCTTEEEEEEEC
T ss_pred C-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhC-----ChhhccCccEEEecCc
Confidence 5 89999999999999999984 6899999765555544332 236899999999886 1112 25788999954
No 288
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.09 E-value=2.2e-05 Score=71.66 Aligned_cols=96 Identities=11% Similarity=0.007 Sum_probs=68.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEch----HHHHHHHHHHhCC---CcEEEEEcChhhh--------------h
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL----VTHCRDSLQLSGI---TNGYFIATNATST--------------F 289 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~----~~~a~~~a~~~~l---~nv~f~~~Da~~l--------------~ 289 (416)
..+|||||| |.+++.||+. ++.+++.+|. .+.|++..++.++ +|++++.+|+.+. +
T Consensus 31 a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 689999999 4788999984 5889999995 4556666777774 5899999997542 1
Q ss_pred hhh----hcc-CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 290 RSI----VAS-YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 290 ~~~----~~~-~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
+.+ ... ..++||+|++. . .|+ ...+..+.+.|+|||.+++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfID---g------~k~----~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVD---G------RFR----VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEEC---S------SSH----HHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEe---C------CCc----hhHHHHHHHhcCCCeEEEE
Confidence 111 111 13689999885 2 111 1556667799999999965
No 289
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.02 E-value=4.4e-06 Score=79.24 Aligned_cols=69 Identities=17% Similarity=0.125 Sum_probs=52.1
Q ss_pred CeEEEEeccccHHHHHHHHhCCCCeEEEEchHH-------HHHHHHHH----hC-C-CcEEEEEcChhhhhhhhhccCCC
Q 014919 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT-------HCRDSLQL----SG-I-TNGYFIATNATSTFRSIVASYPG 298 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~-------~a~~~a~~----~~-l-~nv~f~~~Da~~l~~~~~~~~~~ 298 (416)
.+|||+|||+|..++.+|.+ ..+++++|.+. .+++++.. ++ + .|++++++|+.++++. + +.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~-~---~~ 163 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD-I---TP 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT-C---SS
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh-C---cc
Confidence 78999999999999999998 56899999644 23443332 12 3 5799999999987532 2 34
Q ss_pred ceeEEEEE
Q 014919 299 KLILVSIQ 306 (416)
Q Consensus 299 s~D~v~~~ 306 (416)
+||.|++.
T Consensus 164 ~fDvV~lD 171 (258)
T 2oyr_A 164 RPQVVYLD 171 (258)
T ss_dssp CCSEEEEC
T ss_pred cCCEEEEc
Confidence 79999886
No 290
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.00 E-value=2.5e-05 Score=78.07 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=77.3
Q ss_pred CCeEEEEeccccHHHHHHHHh-----------------CCCCeEEEEch-----------HHHHHHHHH-HhCC-CcEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARK-----------------RKDLNFLGLEL-----------VTHCRDSLQ-LSGI-TNGYF 280 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~-----------------~p~~~~iGvD~-----------~~~a~~~a~-~~~l-~nv~f 280 (416)
.-+|+|+||++|..++.+... .|+.+|+.-|+ +....+.+. ..+. .+-.|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 478999999999999887765 47889999994 122222222 2222 24578
Q ss_pred EEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcc-----------hhhhh---------h-----------hHHHHHH
Q 014919 281 IATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPE-----------HRWRM---------V-----------QRSLVEA 329 (416)
Q Consensus 281 ~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h-----------~krRl---------~-----------~~~~l~~ 329 (416)
+.+....+....| +++++|.|+.++.-.|..+.. .|.++ + -..||+.
T Consensus 133 ~~gvpgSFy~rlf--p~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 133 IGAMPGSFYSRLF--PEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEECCSCTTSCCS--CTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccC--CCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877765666 589999999999999964321 11110 0 1245888
Q ss_pred HHhhccCCcEEEEEe
Q 014919 330 VSDLLVHDGKVFLQS 344 (416)
Q Consensus 330 i~r~LkpgG~l~l~t 344 (416)
.++.|+|||++++.+
T Consensus 211 Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 211 HSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhccCCeEEEEE
Confidence 899999999999874
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.97 E-value=8.9e-05 Score=73.55 Aligned_cols=124 Identities=13% Similarity=0.051 Sum_probs=85.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHH----HHHHHHHhCC------CcEEEEEcChhhhhhhhhccCCCc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTH----CRDSLQLSGI------TNGYFIATNATSTFRSIVASYPGK 299 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~----a~~~a~~~~l------~nv~f~~~Da~~l~~~~~~~~~~s 299 (416)
.+.+|||+++|.|.=+..||+..+...++++|++.. ..+++++.+. .|+.+...|+..+ ... ..+.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~-~~~---~~~~ 223 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKW-GEL---EGDT 223 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGH-HHH---STTC
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhc-chh---cccc
Confidence 468999999999999999999887778999997432 3344444443 4799999999887 322 3678
Q ss_pred eeEEEEECC-----------CCCCCCcchhh---h--hhhHHHHHHHHhhccCCcEEEEEe------CcHHHHHHHHHHH
Q 014919 300 LILVSIQCP-----------NPDFNRPEHRW---R--MVQRSLVEAVSDLLVHDGKVFLQS------DIEEVMLRMKQQF 357 (416)
Q Consensus 300 ~D~v~~~fp-----------dpw~k~~h~kr---R--l~~~~~l~~i~r~LkpgG~l~l~t------D~~~~~~~~~~~~ 357 (416)
||.|.+--| +|....+.... + .+|.++|+...+.|||||+|+.+| .++...++.++..
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 999988633 11000000000 1 136788999999999999999886 4555555555433
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.95 E-value=5.3e-05 Score=75.37 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=83.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh------C------CCcEEEEEcChhhhhhhhhccCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS------G------ITNGYFIATNATSTFRSIVASYP 297 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~------~------l~nv~f~~~Da~~l~~~~~~~~~ 297 (416)
++++||=||-|.|..+.++.+. |..+++.||+.....+.+++. + -++++++.+|+..++.+.-. ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~-~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK-EG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH-HT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh-cc
Confidence 3579999999999999998875 557999999765555544432 1 13589999999988654321 24
Q ss_pred CceeEEEEECCCCCCCC--cchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 298 GKLILVSIQCPNPDFNR--PEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~--~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+.||+|++-.+||+... .+.-..+...+|++.++++|+|||.+..+...
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 68999999877765321 12223467789999999999999999987544
No 293
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.92 E-value=1e-05 Score=84.66 Aligned_cols=124 Identities=14% Similarity=0.044 Sum_probs=79.6
Q ss_pred CeEEEEeccccHHHHHHHHhCC---------------CCeEEEEchHHHHHH----HHHHhCCC-cEEEEEcChhhhhhh
Q 014919 232 PLVVDIGSGNGLFLLGMARKRK---------------DLNFLGLELVTHCRD----SLQLSGIT-NGYFIATNATSTFRS 291 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p---------------~~~~iGvD~~~~a~~----~a~~~~l~-nv~f~~~Da~~l~~~ 291 (416)
.+|||.+||+|.+++.+++..+ ..+++|+|+...+.+ ++..+++. ++.+.++|.... +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~-~- 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLD-D- 323 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTS-C-
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcC-c-
Confidence 4899999999999998865432 468999997554433 33345654 454477886543 1
Q ss_pred hhccCCCceeEEEEECCCCCCCCcchh------hh------------h-----hhHHHHHHHHhhccCCcEEEEEeCcHH
Q 014919 292 IVASYPGKLILVSIQCPNPDFNRPEHR------WR------------M-----VQRSLVEAVSDLLVHDGKVFLQSDIEE 348 (416)
Q Consensus 292 ~~~~~~~s~D~v~~~fpdpw~k~~h~k------rR------------l-----~~~~~l~~i~r~LkpgG~l~l~tD~~~ 348 (416)
.+ ....||.|+.| .||....... .| + .+-.|++.+.+.|+|||++.+.+.+..
T Consensus 324 ~~--~~~~fD~Iv~N--PPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~ 399 (544)
T 3khk_A 324 QH--PDLRADFVMTN--PPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS 399 (544)
T ss_dssp SC--TTCCEEEEEEC--CCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH
T ss_pred cc--ccccccEEEEC--CCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh
Confidence 11 35789999998 4543211000 01 0 112699999999999999888765433
Q ss_pred H------HHHHHHHHHhCC
Q 014919 349 V------MLRMKQQFLEYG 361 (416)
Q Consensus 349 ~------~~~~~~~~~~~~ 361 (416)
+ ...+++.+.+..
T Consensus 400 L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 400 MSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp HHCCGGGHHHHHHHHHHTT
T ss_pred hhcCcchHHHHHHHHHhCC
Confidence 2 345666665554
No 294
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.91 E-value=2e-05 Score=74.85 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=72.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHH---HhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ---LSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~---~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
..+|||||||+|.++...+++.+...+.|+|+......... ..+ .|+..++.++... .+.++.+|+|....
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g-~~ii~~~~~~dv~-----~l~~~~~DlVlsD~ 148 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLG-WNIITFKDKTDIH-----RLEPVKCDTLLCDI 148 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTT-GGGEEEECSCCTT-----TSCCCCCSEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCC-CCeEEEeccceeh-----hcCCCCccEEEecC
Confidence 56899999999999999988877667888886321100000 001 1556667765332 22467899998754
Q ss_pred CCCCCCCcchhhhh-hhHHHHHHHHhhccCC-cEEEEEeCc--HHHHHHHHHHHHh
Q 014919 308 PNPDFNRPEHRWRM-VQRSLVEAVSDLLVHD-GKVFLQSDI--EEVMLRMKQQFLE 359 (416)
Q Consensus 308 pdpw~k~~h~krRl-~~~~~l~~i~r~Lkpg-G~l~l~tD~--~~~~~~~~~~~~~ 359 (416)
... ..++-... -.-.+|+.+.++|+|| |.|+++.=. ..-+..+++.|++
T Consensus 149 apn---sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~ 201 (277)
T 3evf_A 149 GES---SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQR 201 (277)
T ss_dssp CCC---CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHH
T ss_pred ccC---cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHH
Confidence 211 22211100 0124588899999999 999998644 2333444555554
No 295
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.84 E-value=1.5e-05 Score=75.38 Aligned_cols=76 Identities=17% Similarity=0.102 Sum_probs=52.8
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC--CCcEEEEEcChhhh-hhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG--ITNGYFIATNATST-FRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~--l~nv~f~~~Da~~l-~~~~~~~~~~s~D~v~~~ 306 (416)
.+..|||||||+|.++. +++ .+..+++|+|++..+.+.++++- .+|++++++|+..+ +++.++ .++..+.|+.|
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~-~~~~~~~vvsN 97 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE-KMGQPLRVFGN 97 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHH-HHTSCEEEEEE
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhc-ccCCceEEEEC
Confidence 35789999999999999 654 44334999999887777765432 35899999999885 122110 01235778888
Q ss_pred CC
Q 014919 307 CP 308 (416)
Q Consensus 307 fp 308 (416)
.|
T Consensus 98 lP 99 (252)
T 1qyr_A 98 LP 99 (252)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.81 E-value=4.2e-05 Score=76.31 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=70.8
Q ss_pred CCCeEEEEeccccHHHHHHHH--------hC-------CCCeEEEEchH-----HHHHHHHHH----------h-CCCcE
Q 014919 230 AQPLVVDIGSGNGLFLLGMAR--------KR-------KDLNFLGLELV-----THCRDSLQL----------S-GITNG 278 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~--------~~-------p~~~~iGvD~~-----~~a~~~a~~----------~-~l~nv 278 (416)
..-+|+|+|||+|..++.++. ++ |+.+++.-|+- ......... . .-.+-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 357899999999999988732 22 77888888841 111110000 0 00122
Q ss_pred EEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcch-----------hhhh-------------------hhHHHHH
Q 014919 279 YFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEH-----------RWRM-------------------VQRSLVE 328 (416)
Q Consensus 279 ~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~-----------krRl-------------------~~~~~l~ 328 (416)
.|+.+....+....| +++++|.|+.++.-.|..+... |.++ --..||+
T Consensus 132 ~f~~gvpgSFy~rlf--P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~ 209 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLF--PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR 209 (374)
T ss_dssp SEEEEEESCTTSCCS--CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccC--CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 355555555434445 5899999999999999653211 1100 1135789
Q ss_pred HHHhhccCCcEEEEEe
Q 014919 329 AVSDLLVHDGKVFLQS 344 (416)
Q Consensus 329 ~i~r~LkpgG~l~l~t 344 (416)
..++.|+|||++++.+
T Consensus 210 ~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 210 ARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEE
Confidence 9999999999999874
No 297
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.68 E-value=9.6e-05 Score=78.33 Aligned_cols=99 Identities=12% Similarity=0.183 Sum_probs=66.3
Q ss_pred CCeEEEEeccccHH---HHHHHHhC-CCCeEEEEch---HHHHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeE
Q 014919 231 QPLVVDIGSGNGLF---LLGMARKR-KDLNFLGLEL---VTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLIL 302 (416)
Q Consensus 231 ~~~vLDIGCG~G~~---~~~lA~~~-p~~~~iGvD~---~~~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~ 302 (416)
..+|||||||+|-+ ++..+++. -..++++||. ...|++..+.++.. .|+++++|++++ . .++.+|.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev-~-----LPEKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREW-V-----APEKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTC-C-----CSSCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceec-c-----CCcccCE
Confidence 35799999999988 44444432 2347899995 34455666677776 499999999987 2 3578999
Q ss_pred EEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEE
Q 014919 303 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 341 (416)
Q Consensus 303 v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~ 341 (416)
|..=.-... - -+. .+ ++.|....|.|||||.++
T Consensus 432 IVSEwMG~f-L-l~E--~m--levL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSF-A-DNE--LS--PECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTT-B-GGG--CH--HHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCccc-c-ccc--CC--HHHHHHHHHhcCCCcEEc
Confidence 965321111 0 011 11 467788899999999843
No 298
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.64 E-value=9.1e-05 Score=78.83 Aligned_cols=104 Identities=10% Similarity=0.047 Sum_probs=66.3
Q ss_pred CCeEEEEeccccHHHHH---HHH-hC---------CCCeEEEEchHHHH---HHHHHHhCCCc-EEEEEcChhhhhhhhh
Q 014919 231 QPLVVDIGSGNGLFLLG---MAR-KR---------KDLNFLGLELVTHC---RDSLQLSGITN-GYFIATNATSTFRSIV 293 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~---lA~-~~---------p~~~~iGvD~~~~a---~~~a~~~~l~n-v~f~~~Da~~l~~~~~ 293 (416)
..+|||||||+|-+... .++ .. ...+++|||.+..| ++....++..+ |+++++|++++ ....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev-~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSL-PGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGH-HHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhc-cccc
Confidence 45899999999999632 222 11 24599999965433 23333467765 99999999997 2100
Q ss_pred -ccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEE
Q 014919 294 -ASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 341 (416)
Q Consensus 294 -~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~ 341 (416)
.-.++.+|.|..-..... -. ....++.|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsf-l~-----nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSF-GD-----NELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTT-BG-----GGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccc-cc-----hhccHHHHHHHHHhCCCCcEEE
Confidence 001578999976422211 00 0123578888899999999743
No 299
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.55 E-value=3.5e-05 Score=76.38 Aligned_cols=112 Identities=13% Similarity=0.149 Sum_probs=74.2
Q ss_pred CCeEEEEeccccHHHHHHHHh----------------CCCCeEEEEchHH---HHH-HHHHHh-CCCcEEEEEcChhhhh
Q 014919 231 QPLVVDIGSGNGLFLLGMARK----------------RKDLNFLGLELVT---HCR-DSLQLS-GITNGYFIATNATSTF 289 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~----------------~p~~~~iGvD~~~---~a~-~~a~~~-~l~nv~f~~~Da~~l~ 289 (416)
.-+|+|+||++|..++.+... .|+.+++..|+-. +.+ +..... .-.+-.|+.+....+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 467999999999887765443 5778899999521 111 111100 0013477777777665
Q ss_pred hhhhccCCCceeEEEEECCCCCCCCcc-----hhhh-------------h----h---hHHHHHHHHhhccCCcEEEEEe
Q 014919 290 RSIVASYPGKLILVSIQCPNPDFNRPE-----HRWR-------------M----V---QRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 290 ~~~~~~~~~s~D~v~~~fpdpw~k~~h-----~krR-------------l----~---~~~~l~~i~r~LkpgG~l~l~t 344 (416)
...| +++++|.++.++.-.|..+.- .|.+ . . -..||+..++.|+|||++++.+
T Consensus 132 ~rlf--p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 132 GRLF--PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SCCS--CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hccC--CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 5556 589999999999999965421 0100 0 0 1367999999999999999874
No 300
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.54 E-value=0.00011 Score=63.42 Aligned_cols=85 Identities=13% Similarity=0.200 Sum_probs=57.8
Q ss_pred CCeEEEEecccc-HHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 231 QPLVVDIGSGNG-LFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 231 ~~~vLDIGCG~G-~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
..++||||||+| ..+..||++ .+.+++++|++..|.. |++.|+.+...+. -..+|+|+..-|.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~-----------~v~dDiF~P~~~~----Y~~~DLIYsirPP 99 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG-----------IVRDDITSPRMEI----YRGAALIYSIRPP 99 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT-----------EECCCSSSCCHHH----HTTEEEEEEESCC
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc-----------eEEccCCCCcccc----cCCcCEEEEcCCC
Confidence 579999999999 699999974 2689999999765543 8888886531110 1479999887554
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
|- +++.+++...+ -|.-+++.+
T Consensus 100 ~E----------l~~~i~~lA~~---v~adliI~p 121 (153)
T 2k4m_A 100 AE----------IHSSLMRVADA---VGARLIIKP 121 (153)
T ss_dssp TT----------THHHHHHHHHH---HTCEEEEEC
T ss_pred HH----------HHHHHHHHHHH---cCCCEEEEc
Confidence 42 34444443333 366777764
No 301
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.48 E-value=9.5e-05 Score=70.36 Aligned_cols=122 Identities=9% Similarity=-0.006 Sum_probs=71.9
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH--hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL--SGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~--~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
....|||||||.|.++...+++.+...++|+|+.......... .--.|+.....++... .+.+..+|+|...-
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~-----~l~~~~~DvVLSDm 164 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVF-----NMEVIPGDTLLCDI 164 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGG-----GSCCCCCSEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchh-----hcCCCCcCEEEecC
Confidence 3568999999999999999988787789999974321110000 0012444444443221 12467899997643
Q ss_pred CCCCCCCcchhhh-hhhHHHHHHHHhhccCC--cEEEEEeCc--HHHHHHHHHHHHh
Q 014919 308 PNPDFNRPEHRWR-MVQRSLVEAVSDLLVHD--GKVFLQSDI--EEVMLRMKQQFLE 359 (416)
Q Consensus 308 pdpw~k~~h~krR-l~~~~~l~~i~r~Lkpg--G~l~l~tD~--~~~~~~~~~~~~~ 359 (416)
. +...++... .-+-.+|+.+.++|+|| |.|+++.=. ..-+..+++.|++
T Consensus 165 A---pnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~ 218 (282)
T 3gcz_A 165 G---ESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQL 218 (282)
T ss_dssp C---CCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHH
T ss_pred c---cCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHH
Confidence 1 222221110 01124588889999999 999998644 2333445555554
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.39 E-value=0.00079 Score=65.11 Aligned_cols=125 Identities=13% Similarity=0.050 Sum_probs=79.1
Q ss_pred CCeEEEEeccccHHHHHHH----HhCCCC--eEEEEch------------HHHHHHHHHHh----CCC--cEEEEEcChh
Q 014919 231 QPLVVDIGSGNGLFLLGMA----RKRKDL--NFLGLEL------------VTHCRDSLQLS----GIT--NGYFIATNAT 286 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA----~~~p~~--~~iGvD~------------~~~a~~~a~~~----~l~--nv~f~~~Da~ 286 (416)
.-+|||+|+|+|...+... +..|+. +++.+|- .....+..... .-. .+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 4579999999998754322 346664 5778872 11111111111 112 3678999999
Q ss_pred hhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCCcee
Q 014919 287 STFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 366 (416)
Q Consensus 287 ~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~~~~ 366 (416)
+.+++. .+..+|.+++ |+......+ .+=++++++.++++++|||+|.--|- .-.+++.|.+.||.+..
T Consensus 177 ~~l~~l---~~~~~Da~fl---DgFsP~kNP--eLWs~e~f~~l~~~~~pgg~laTYta----ag~VRR~L~~aGF~V~k 244 (308)
T 3vyw_A 177 KRIKEV---ENFKADAVFH---DAFSPYKNP--ELWTLDFLSLIKERIDEKGYWVSYSS----SLSVRKSLLTLGFKVGS 244 (308)
T ss_dssp HHGGGC---CSCCEEEEEE---CCSCTTTSG--GGGSHHHHHHHHTTEEEEEEEEESCC----CHHHHHHHHHTTCEEEE
T ss_pred HHHhhh---cccceeEEEe---CCCCcccCc--ccCCHHHHHHHHHHhCCCcEEEEEeC----cHHHHHHHHHCCCEEEe
Confidence 876532 3457999977 554222211 24457999999999999999875332 33467788999987654
Q ss_pred e
Q 014919 367 L 367 (416)
Q Consensus 367 ~ 367 (416)
.
T Consensus 245 ~ 245 (308)
T 3vyw_A 245 S 245 (308)
T ss_dssp E
T ss_pred c
Confidence 3
No 303
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.32 E-value=0.00074 Score=64.45 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=57.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhc-cCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVA-SYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~-~~~~s~D~v~~~ 306 (416)
.+.++||.+||.|.++..++++ +.+++|+|....|++.+++..-++++++++|..++ +..+. ...+++|.|++.
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l-~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHL-KRHLAALGVERVDGILAD 96 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGH-HHHHHHTTCSCEEEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchH-HHHHHHcCCCCcCEEEeC
Confidence 3689999999999999999998 77999999988887776552115899999999987 33332 123579998764
No 304
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.11 E-value=0.00058 Score=65.36 Aligned_cols=122 Identities=9% Similarity=-0.031 Sum_probs=70.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHH-hC-CCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQL-SG-ITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~-~~-l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||||||++|.++..++++.+-..++|+|+.......... .. -.++.....++... .+..+.+|+|...-
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~-----~l~~~~~DlVlsD~ 155 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVF-----TMPTEPSDTLLCDI 155 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTT-----TSCCCCCSEEEECC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceee-----ecCCCCcCEEeecC
Confidence 4789999999999999999987776788999973211000000 00 01333333332211 11467899997742
Q ss_pred CCCCCCCcchhh-hhhhHHHHHHHHhhccCC-cEEEEEeCc--HHHHHHHHHHHHh
Q 014919 308 PNPDFNRPEHRW-RMVQRSLVEAVSDLLVHD-GKVFLQSDI--EEVMLRMKQQFLE 359 (416)
Q Consensus 308 pdpw~k~~h~kr-Rl~~~~~l~~i~r~Lkpg-G~l~l~tD~--~~~~~~~~~~~~~ 359 (416)
. |...++.. ..-+-.+|+.+.++|+|| |.|+++.=. ..-...+++.|++
T Consensus 156 A---PnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~ 208 (300)
T 3eld_A 156 G---ESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQL 208 (300)
T ss_dssp C---CCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHH
T ss_pred c---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHH
Confidence 1 22222111 111124588889999999 999998544 2333444555554
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.05 E-value=0.0023 Score=61.17 Aligned_cols=108 Identities=14% Similarity=0.078 Sum_probs=68.9
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH---HHHHhCCCcEEEEEc-ChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD---SLQLSGITNGYFIAT-NATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~---~a~~~~l~nv~f~~~-Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+..||||||++|.++...|.+..-..|+|+|+-..-.. ..+..+-..|.|..+ |+..+ .+..+|.|.+-
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l-------~~~~~D~ivcD 167 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYR-------PSECCDTLLCD 167 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSS-------CCCCCSEEEEC
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhC-------CCCCCCEEEEE
Confidence 56999999999999998888876678999996221000 000112234888888 88766 24669998875
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEEeCcH
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQSDIE 347 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~tD~~ 347 (416)
.-..-+...-...|-+ ..|+.+.++|++| |.|+++.-.+
T Consensus 168 igeSs~~~~ve~~Rtl--~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 168 IGESSSSAEVEEHRTI--RVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCCCSCHHHHHHHHH--HHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CccCCCChhhhhhHHH--HHHHHHHHHhccCCCcEEEEEcCC
Confidence 3211100000111211 4688889999999 9999986554
No 306
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.02 E-value=0.00054 Score=63.52 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=69.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH---HHHHhCCCcEEEEEc-ChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD---SLQLSGITNGYFIAT-NATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~---~a~~~~l~nv~f~~~-Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+..||||||++|.++...+.+.....|+|+|+-..-.+ ..+..|-..|+|.++ |+..+ ++..+|.|.+-
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~-------~~~~~DtllcD 151 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYL-------PPEKCDTLLCD 151 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGC-------CCCCCSEEEEC
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeec-------CCccccEEEEe
Confidence 56999999999999998888877778999996221000 011235567999999 98665 34679999875
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
.-..-+...-...|-+ ..|+.+.++|++ |.|+++.-
T Consensus 152 IgeSs~~~~vE~~Rtl--rvLela~~wL~~-~~fc~KVl 187 (267)
T 3p8z_A 152 IGESSPSPTVEESRTI--RVLKMVEPWLKN-NQFCIKVL 187 (267)
T ss_dssp CCCCCSCHHHHHHHHH--HHHHHHGGGCSS-CEEEEEES
T ss_pred cCCCCCChhhhhhHHH--HHHHHHHHhccc-CCEEEEEc
Confidence 3211100000111221 478888999999 88888753
No 307
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.89 E-value=0.0032 Score=62.31 Aligned_cols=68 Identities=7% Similarity=0.103 Sum_probs=51.3
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.++|||||.+|.++..++++ ...|+|||.....-. ....++|.++++|+..+. + ....+|.|++-.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~---l~~~~~V~~~~~d~~~~~----~-~~~~~D~vvsDm 278 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQS---LMDTGQVTWLREDGFKFR----P-TRSNISWMVCDM 278 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHH---HHTTTCEEEECSCTTTCC----C-CSSCEEEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChh---hccCCCeEEEeCcccccc----C-CCCCcCEEEEcC
Confidence 3789999999999999999988 679999995321111 123478999999998762 1 356899997743
No 308
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.65 E-value=0.0036 Score=58.77 Aligned_cols=97 Identities=15% Similarity=0.034 Sum_probs=60.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC----CeEEEEchHHHHHHHHHHhCC----Cc---EEEEEc-ChhhhhhhhhccCC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD----LNFLGLELVTHCRDSLQLSGI----TN---GYFIAT-NATSTFRSIVASYP 297 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~----~~~iGvD~~~~a~~~a~~~~l----~n---v~f~~~-Da~~l~~~~~~~~~ 297 (416)
.+..|||+||+.|.++...+++.+- ..++|+|+ . ...+ .+ +.|.++ |+.++ .+
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~Df~~~-------~~ 137 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVDVFYK-------PS 137 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCCGGGS-------CC
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCCccCC-------CC
Confidence 3789999999999999988876211 23445552 0 1111 23 356657 98775 35
Q ss_pred CceeEEEEECCCCCCCCcch---hhhhhhHHHHHHHHhhccCCc-EEEEEeCc
Q 014919 298 GKLILVSIQCPNPDFNRPEH---RWRMVQRSLVEAVSDLLVHDG-KVFLQSDI 346 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~~h~---krRl~~~~~l~~i~r~LkpgG-~l~l~tD~ 346 (416)
..+|.|.+-. =|...+. .-|.+ ..|+-+.++|+||| .|+++.=.
T Consensus 138 ~~~DvVLSDM---APnSG~~~vD~~Rs~--~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 138 EISDTLLCDI---GESSPSAEIEEQRTL--RILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCSEEEECC---CCCCSCHHHHHHHHH--HHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCEEEeCC---CCCCCccHHHHHHHH--HHHHHHHHHhhcCCcEEEEEECC
Confidence 6799997643 2222221 11222 25777789999999 88887543
No 309
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.64 E-value=0.0034 Score=61.34 Aligned_cols=76 Identities=12% Similarity=0.017 Sum_probs=59.4
Q ss_pred CCCeEEEEeccccHHHHHHHHhC-CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccC--CCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASY--PGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~--~~s~D~v~~~ 306 (416)
.+.++||..||.|.++..++++. |+.+++|+|....|++.+++....++++++++..++ .+.++.. .+++|.|++.
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l-~~~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSAL-GEYVAERDLIGKIDGILLD 135 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGH-HHHHHHTTCTTCEEEEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHH-HHHHHhcCCCCcccEEEEC
Confidence 46899999999999999999884 788999999988888877433335799999999887 3333211 1369999765
No 310
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.57 E-value=0.0083 Score=62.40 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=77.0
Q ss_pred CCeEEEEeccccHHHHHHHHhC-------------CCCeEEEEchHHHH----HHHHHHhCCCcEEEEEcChhhhh-hhh
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR-------------KDLNFLGLELVTHC----RDSLQLSGITNGYFIATNATSTF-RSI 292 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~-------------p~~~~iGvD~~~~a----~~~a~~~~l~nv~f~~~Da~~l~-~~~ 292 (416)
+.+|+|-.||+|.|++...+.. ...+++|+|+...+ ..++.-++..+-.+.++|..... .+.
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~ 297 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREM 297 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhh
Confidence 5689999999999998876531 13579999964433 33333467766667788875431 111
Q ss_pred hccCCCceeEEEEECCCCCCCCcch----------hhhhhhHHHHHHHHhhcc-------CCcEEEEEeCcHHH-----H
Q 014919 293 VASYPGKLILVSIQCPNPDFNRPEH----------RWRMVQRSLVEAVSDLLV-------HDGKVFLQSDIEEV-----M 350 (416)
Q Consensus 293 ~~~~~~s~D~v~~~fpdpw~k~~h~----------krRl~~~~~l~~i~r~Lk-------pgG~l~l~tD~~~~-----~ 350 (416)
. ....||+|..| .||-..... +..-.+-.|++.+.+.|| |||++.+.+.+..+ .
T Consensus 298 ~--~~~~fD~Il~N--PPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~ 373 (530)
T 3ufb_A 298 G--DKDRVDVILTN--PPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGIS 373 (530)
T ss_dssp C--GGGCBSEEEEC--CCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHH
T ss_pred c--ccccceEEEec--CCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchH
Confidence 1 23579999998 454221100 000113468888999887 69999887655433 2
Q ss_pred HHHHHHHHhC
Q 014919 351 LRMKQQFLEY 360 (416)
Q Consensus 351 ~~~~~~~~~~ 360 (416)
..+++.+.+.
T Consensus 374 ~~iRk~Lle~ 383 (530)
T 3ufb_A 374 ARIKEELLKN 383 (530)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 3455555443
No 311
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.32 E-value=0.0076 Score=64.51 Aligned_cols=126 Identities=12% Similarity=0.101 Sum_probs=79.5
Q ss_pred CCeEEEEeccccHHHHHHHHhC-------CC-----CeEEEEch---H----HHHHH-----------HHHHh-----C-
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR-------KD-----LNFLGLEL---V----THCRD-----------SLQLS-----G- 274 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~-------p~-----~~~iGvD~---~----~~a~~-----------~a~~~-----~- 274 (416)
.-+|+|+|+|+|...+.+.+.+ |+ .+|+.+|. . .++++ ..+.. |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4689999999999988876642 33 57999993 1 12211 11111 1
Q ss_pred ----C----CcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 275 ----I----TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 275 ----l----~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
+ -.+.++.+|+.+.+++.-......+|.+|+ |+......+ .+-+.+++..+.++++|||.+.--+-.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~fl---D~f~p~~np--~~w~~~~~~~l~~~~~~g~~~~t~~~~ 213 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFL---DGFAPAKNP--DMWNEQLFNAMARMTRPGGTFSTFTAA 213 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEE---CSSCC--CC--TTCSHHHHHHHHHHEEEEEEEEESCCC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEE---CCCCCCCCh--hhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 1 147889999998865421101468999977 333111100 123469999999999999998764433
Q ss_pred HHHHHHHHHHHHhCCCCce
Q 014919 347 EEVMLRMKQQFLEYGKGKL 365 (416)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~ 365 (416)
....+.+.+.|+...
T Consensus 214 ----~~vr~~l~~aGf~~~ 228 (689)
T 3pvc_A 214 ----GFVRRGLQQAGFNVT 228 (689)
T ss_dssp ----HHHHHHHHHTTCEEE
T ss_pred ----HHHHHHHHhCCeEEE
Confidence 346677888888643
No 312
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.22 E-value=0.011 Score=62.91 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=77.9
Q ss_pred CCeEEEEeccccHHHHHHHHh-------CCC-----CeEEEEch---HH----HHHH-----------HHHHh-----C-
Q 014919 231 QPLVVDIGSGNGLFLLGMARK-------RKD-----LNFLGLEL---VT----HCRD-----------SLQLS-----G- 274 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~-------~p~-----~~~iGvD~---~~----~a~~-----------~a~~~-----~- 274 (416)
.-+|+|+|+|+|...+...+. +|+ .+|+++|. .. ++++ ..... +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 468999999999987776543 333 46999993 22 1221 11111 1
Q ss_pred --------CCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCc
Q 014919 275 --------ITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 346 (416)
Q Consensus 275 --------l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~ 346 (416)
--.+.+..+|+.+.+++.-......+|.+|+ |++..... ..+-+.++++.++++++|||.+...+-.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~---D~f~p~~n--p~~w~~~~~~~l~~~~~~g~~~~t~~~~ 221 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFL---DGFAPAKN--PDMWTQNLFNAMARLARPGGTLATFTSA 221 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEE---CCSCGGGC--GGGSCHHHHHHHHHHEEEEEEEEESCCC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEE---CCCCCcCC--hhhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 1236688899988765431111467999977 44321111 1233579999999999999998865433
Q ss_pred HHHHHHHHHHHHhCCCCc
Q 014919 347 EEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~ 364 (416)
....+.+.+.|+..
T Consensus 222 ----~~vr~~L~~aGf~v 235 (676)
T 3ps9_A 222 ----GFVRRGLQDAGFTM 235 (676)
T ss_dssp ----HHHHHHHHHHTCEE
T ss_pred ----HHHHHHHHhCCeEE
Confidence 24566777778754
No 313
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.73 E-value=0.026 Score=53.89 Aligned_cols=85 Identities=13% Similarity=0.098 Sum_probs=54.4
Q ss_pred CCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCcch------hhh------hh--hHHHHHHHHhhccCCcEE
Q 014919 275 ITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEH------RWR------MV--QRSLVEAVSDLLVHDGKV 340 (416)
Q Consensus 275 l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~------krR------l~--~~~~l~~i~r~LkpgG~l 340 (416)
+.+++++++|+.+.+.. + ++++||+|+.+ .|+...... .+. .. ...+++++.++|||||.+
T Consensus 19 ~~~~~i~~gD~~~~l~~-l--~~~s~DlIvtd--PPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 19 FGVHRLHVGDAREVLAS-F--PEASVHLVVTS--PPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp --CEEEEESCHHHHHTT-S--CTTCEEEEEEC--CCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred ccCCEEEECcHHHHHhh-C--CCCceeEEEEC--CCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 45789999999986442 3 47899999987 455422110 000 00 135678999999999999
Q ss_pred EEEeCcH-------------HHHHHHHHHHHhCCCCc
Q 014919 341 FLQSDIE-------------EVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 341 ~l~tD~~-------------~~~~~~~~~~~~~~~~~ 364 (416)
++..++. ++...+...+++.||..
T Consensus 94 ~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~ 130 (297)
T 2zig_A 94 VIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDN 130 (297)
T ss_dssp EEEECCEEEECC----EEEECHHHHHHHHHHHTTCEE
T ss_pred EEEECCCccccccCCcccccccHHHHHHHHHHcCCee
Confidence 9876532 12345666788888753
No 314
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.57 E-value=0.042 Score=52.56 Aligned_cols=100 Identities=11% Similarity=0.091 Sum_probs=64.5
Q ss_pred CCCCeEEEEec------cccHHHHHHHHhCCC-CeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 229 PAQPLVVDIGS------GNGLFLLGMARKRKD-LNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 229 ~~~~~vLDIGC------G~G~~~~~lA~~~p~-~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
|.+.+|||+|+ -.|.+ .+.+..|. ..++++|+.... ...+ .++++|..... ..+.+|
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-------sda~-~~IqGD~~~~~------~~~k~D 171 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-------SDAD-STLIGDCATVH------TANKWD 171 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-------CSSS-EEEESCGGGEE------ESSCEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-------cCCC-eEEEccccccc------cCCCCC
Confidence 35899999995 77874 45566786 699999974311 1123 55999987651 247899
Q ss_pred EEEEECCCCCCCCcchhh-hh--hhHHHHHHHHhhccCCcEEEEEe
Q 014919 302 LVSIQCPNPDFNRPEHRW-RM--VQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~kr-Rl--~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+|..-..++-......-+ |. +-+..++-+.++|+|||.|.++.
T Consensus 172 LVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 172 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp EEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 997643222111111111 12 23567788899999999999984
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.51 E-value=0.069 Score=50.21 Aligned_cols=102 Identities=13% Similarity=0.157 Sum_probs=70.7
Q ss_pred CCeEEEEeccccHHHHHHHHh-------CCCCeEEEEch-------HH--------------------HHHHHH-H----
Q 014919 231 QPLVVDIGSGNGLFLLGMARK-------RKDLNFLGLEL-------VT--------------------HCRDSL-Q---- 271 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~-------~p~~~~iGvD~-------~~--------------------~a~~~a-~---- 271 (416)
...++|+||-.|..+..+|+. +++.+++|+|. .+ .-.++. +
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 578999999999999987753 47889999992 00 001111 1
Q ss_pred --HhCC--CcEEEEEcChhhhhhhhhcc-CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 272 --LSGI--TNGYFIATNATSTFRSIVAS-YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 272 --~~~l--~nv~f~~~Da~~l~~~~~~~-~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
..+. +|++++.+++.+.++.++.. +...+|.+++-. | + .. -....++.+...|+|||.+++
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D-~----Y~----~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-D-L----YE----PTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-C-C----HH----HHHHHHHHHGGGEEEEEEEEE
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-c-c----cc----hHHHHHHHHHHHhCCCcEEEE
Confidence 1232 68999999999987665321 345799998853 2 1 00 123678899999999999988
No 316
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.50 E-value=0.021 Score=56.19 Aligned_cols=58 Identities=14% Similarity=-0.013 Sum_probs=44.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh-CCCcEEEEEcChhhh
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS-GITNGYFIATNATST 288 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~-~l~nv~f~~~Da~~l 288 (416)
+..|||||.|.|.++..|+++....++++||+........++. ..+|++++.+|+..+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 5889999999999999999875445899999755444433321 346899999999765
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.44 E-value=0.046 Score=53.00 Aligned_cols=84 Identities=15% Similarity=0.066 Sum_probs=55.4
Q ss_pred CcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCCc--------chhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 276 TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRP--------EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 276 ~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~--------h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
++.+++++|+.+.+. .+ +++++|+|++. .|+.... +...-......+++++++|+|||.+++..++.
T Consensus 13 ~~~~ii~gD~~~~l~-~l--~~~svDlI~tD--PPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 13 SNGSMYIGDSLELLE-SF--PEESISLVMTS--PPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSEEEEESCHHHHGG-GS--CSSCEEEEEEC--CCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCceEEeCcHHHHHh-hC--CCCCeeEEEEC--CCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 457899999988654 23 47899999885 4443221 00000112477889999999999999987754
Q ss_pred ----------HHHHHHHHHHHhCCCCc
Q 014919 348 ----------EVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 348 ----------~~~~~~~~~~~~~~~~~ 364 (416)
.....+++.++..|+..
T Consensus 88 ~~~g~~~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 88 YMKGVPARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp EETTEEEECCHHHHHHHHHHHTTCCEE
T ss_pred ecCCCcccccchHHHHHHHHHhCCCEE
Confidence 13445566677887653
No 318
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.43 E-value=0.023 Score=54.39 Aligned_cols=37 Identities=32% Similarity=0.394 Sum_probs=30.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD 268 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~ 268 (416)
.+.+|||++||+|..++.+++. +.+++|+|+...+.+
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~ 271 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQ 271 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHH
Confidence 4789999999999999998876 569999997554433
No 319
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.55 E-value=0.1 Score=48.69 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=50.8
Q ss_pred EEEEEcChhhhhhhhhccCCCceeEEEEECCCCCCCC-c-------chhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHH
Q 014919 278 GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNR-P-------EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 349 (416)
Q Consensus 278 v~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~-~-------h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~ 349 (416)
.+++++|+.+.+.. + +++++|+|++. .|+... . +....-.....++++.++|+|||.+++..+...
T Consensus 5 ~~l~~gD~~~~l~~-l--~~~~vdlI~~D--PPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~~- 78 (260)
T 1g60_A 5 NKIHQMNCFDFLDQ-V--ENKSVQLAVID--PPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFN- 78 (260)
T ss_dssp SSEEECCHHHHHHH-S--CTTCEEEEEEC--CCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHH-
T ss_pred CeEEechHHHHHHh-c--cccccCEEEEC--CCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcHH-
Confidence 46789999887653 3 46799999875 344322 1 000001234678889999999999999865432
Q ss_pred HHHHHHHHHhCCCC
Q 014919 350 MLRMKQQFLEYGKG 363 (416)
Q Consensus 350 ~~~~~~~~~~~~~~ 363 (416)
...+...+.+.+|.
T Consensus 79 ~~~~~~~~~~~gf~ 92 (260)
T 1g60_A 79 CAFICQYLVSKGMI 92 (260)
T ss_dssp HHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhhccc
Confidence 23345566666664
No 320
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.49 E-value=0.1 Score=50.90 Aligned_cols=129 Identities=10% Similarity=0.034 Sum_probs=75.8
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC-CeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
..+++|+-||.|.+.+.+.++.-+ ..++++|+...|.+..+.+ .++..++++|+.++....++ ...+|+++..+|=
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N-~~~~~~~~~Di~~~~~~~~~--~~~~D~l~~gpPC 78 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN-FPHTQLLAKTIEGITLEEFD--RLSFDMILMSPPC 78 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH-CTTSCEECSCGGGCCHHHHH--HHCCSEEEECCC-
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHh-ccccccccCCHHHccHhHcC--cCCcCEEEEcCCC
Confidence 357999999999999999887321 3689999988888776544 34556789999887433231 2268999987652
Q ss_pred -CCCCCcchhh----h-hhhHHHHHHHHhhcc--CCcEEEEE--eC--cHHHHHHHHHHHHhCCCCc
Q 014919 310 -PDFNRPEHRW----R-MVQRSLVEAVSDLLV--HDGKVFLQ--SD--IEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 310 -pw~k~~h~kr----R-l~~~~~l~~i~r~Lk--pgG~l~l~--tD--~~~~~~~~~~~~~~~~~~~ 364 (416)
++....+.+. | -....++ ++.+.++ |.- +++. .. ....+..+++.|++.|+..
T Consensus 79 q~fS~ag~~~g~~d~r~~l~~~~~-~~i~~~~~~P~~-~~~ENV~~l~~~~~~~~i~~~l~~~GY~v 143 (343)
T 1g55_A 79 QPFTRIGRQGDMTDSRTNSFLHIL-DILPRLQKLPKY-ILLENVKGFEVSSTRDLLIQTIENCGFQY 143 (343)
T ss_dssp -----------------CHHHHHH-HHGGGCSSCCSE-EEEEEETTGGGSHHHHHHHHHHHHTTEEE
T ss_pred cchhhcCCcCCccCccchHHHHHH-HHHHHhcCCCCE-EEEeCCccccCHHHHHHHHHHHHHCCCee
Confidence 2222111110 1 1112333 3344555 653 3331 11 1246677888888888653
No 321
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.05 E-value=0.4 Score=47.42 Aligned_cols=129 Identities=12% Similarity=0.039 Sum_probs=79.2
Q ss_pred CeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhc---cCCCceeEEEEECC
Q 014919 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVA---SYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~---~~~~s~D~v~~~fp 308 (416)
-+++|+-||.|.+.+.+.++. -..+.++|+...|.+..+.+ .++..++++|+.++..+.+. .....+|+|+..+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N-~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAIN-FPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHH-CTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHh-CCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 469999999999999998873 22466999988887765543 45778889999886322110 02467999988765
Q ss_pred CCCCCCcc-----hhhhhhhHHHHHHHHhhccCCcEEE------EEeCcHHHHHHHHHHHHhCCCCc
Q 014919 309 NPDFNRPE-----HRWRMVQRSLVEAVSDLLVHDGKVF------LQSDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 309 dpw~k~~h-----~krRl~~~~~l~~i~r~LkpgG~l~------l~tD~~~~~~~~~~~~~~~~~~~ 364 (416)
=.-+.... ..|.-+...+++ +.+.++|.-.++ +..+...+++.++ .|++.|+..
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred CCCcccccCCCCCCchHHHHHHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 22222111 111111234443 444568854443 1234456788888 888887654
No 322
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.85 E-value=0.2 Score=48.96 Aligned_cols=95 Identities=18% Similarity=0.189 Sum_probs=63.7
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc---ChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||-+|||. |..++.+|+......++++|.+..-++.+++.|.+.+ +.. |..+.+.+. .++.+|.|+-
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~~~---~~gg~D~vid 264 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV--INSKTQDPVAAIKEI---TDGGVNFALE 264 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE--EETTTSCHHHHHHHH---TTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEE--ecCCccCHHHHHHHh---cCCCCcEEEE
Confidence 368999999987 8889999987643379999987666666667776532 222 221111222 2347998865
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.-.. +..++...+.|+++|++.+.
T Consensus 265 ~~g~--------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 265 STGS--------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp CSCC--------------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCC--------------HHHHHHHHHHHhcCCEEEEe
Confidence 4211 25678889999999998874
No 323
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=93.83 E-value=0.42 Score=45.37 Aligned_cols=121 Identities=16% Similarity=0.123 Sum_probs=81.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHh--CCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~--~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+..+||+=+|+|.+++++.+ +..+++.+|....+.+..+++ ..+++++++.|+...+....| +...+|+|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~-~~~~fdLVfi--- 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLP-PPEKRGLIFI--- 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCS-CTTSCEEEEE---
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcC-CCCCccEEEE---
Confidence 46689999999999999887 357899999877777665433 235799999998776554433 3457999987
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHh--hccCCcEEEEEeC--cHHHHHHHHHHHHhCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSD--LLVHDGKVFLQSD--IEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r--~LkpgG~l~l~tD--~~~~~~~~~~~~~~~~~ 362 (416)
||-+.... ...+.++.+.+ .+.|+|.+.+-.. ...-.+.|.+.+++.+.
T Consensus 166 DPPYe~k~-----~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 166 DPSYERKE-----EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp CCCCCSTT-----HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCc-----HHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 56333211 11244544444 4578999888643 23345677777776655
No 324
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.39 E-value=0.28 Score=47.73 Aligned_cols=98 Identities=13% Similarity=0.050 Sum_probs=63.8
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcC---hhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATN---ATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~D---a~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||-+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+ +..+ ..++...........+|.++-
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV--LQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE--EECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE--EcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 367899999986 8889999988743389999987666666667776533 3322 122211111101246898865
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.-.. +..++...+.|+|+|++.+.
T Consensus 249 ~~g~--------------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 249 CTGA--------------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCC--------------hHHHHHHHHHhcCCCEEEEE
Confidence 4211 25678889999999998874
No 325
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.03 E-value=0.23 Score=48.01 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=66.2
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..||=+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+.-...|..+.+.+.. ....+|.++-.-.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t--~g~g~d~v~d~~G 248 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT--GGQGATAVFDFVG 248 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHH--GGGCEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHh--CCCCCeEEEECCC
Confidence 468899999986 8888999988767899999987766677777776543221222222112222 1236898865322
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. +..++...+.|+++|++.+.
T Consensus 249 ~--------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 249 A--------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp C--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred C--------------HHHHHHHHHHHhcCCEEEEE
Confidence 1 25788899999999998874
No 326
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.88 E-value=0.17 Score=43.70 Aligned_cols=105 Identities=13% Similarity=0.130 Sum_probs=65.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
..-|||+|-|+|..--.|.+.+|+..++.+|....+.- ..-.+.=.++.+|+.+.++...+.-.....+++.-+--.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp---~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g 117 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHP---DSTPPEAQLILGDIRETLPATLERFGATASLVHADLGGH 117 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCG---GGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEECCCCS
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCC---CCCCchHheecccHHHHHHHHHHhcCCceEEEEeecCCC
Confidence 56799999999999999999999999999995221111 011233468899999876542110144555565543211
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
.+ .|.-.....+-..+..+|.|||.++-
T Consensus 118 ---~~-~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 118 ---NR-EKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp ---CH-HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ---Cc-chhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 11 11111112334567889999998764
No 327
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.44 E-value=0.22 Score=49.27 Aligned_cols=107 Identities=11% Similarity=-0.028 Sum_probs=64.3
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc---Ch-hhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT---NA-TSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~---Da-~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..||-+|||. |.+++.+|+.....+++++|.+..-++.+++.|.. .+.. |. .+.+.+.. ....+|.++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---~i~~~~~~~~~~~~~~~~--~g~g~Dvvi 259 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE---TIDLRNSAPLRDQIDQIL--GKPEVDCGV 259 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE---EEETTSSSCHHHHHHHHH--SSSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc---EEcCCCcchHHHHHHHHh--CCCCCCEEE
Confidence 368899999987 89999999976433899999876666666666652 2322 21 11112222 123699987
Q ss_pred EECCCCCCCCcchh--hhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHR--WRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~k--rRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.-..++. .+.. -.+..+..++...+.|+++|++.+.
T Consensus 260 d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 260 DAVGFEAH--GLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp ECSCTTCB--CSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCccc--cccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 54332210 0000 0000024678889999999998753
No 328
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.22 E-value=0.3 Score=47.15 Aligned_cols=65 Identities=8% Similarity=0.070 Sum_probs=43.5
Q ss_pred EEEE-EcChhhhhhhhhccCCCceeEEEEECCCCCCCCc-----chhhhhhhHHHHHHHHhhccCCcEEEEEeCcH
Q 014919 278 GYFI-ATNATSTFRSIVASYPGKLILVSIQCPNPDFNRP-----EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 347 (416)
Q Consensus 278 v~f~-~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw~k~~-----h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~ 347 (416)
.+++ ++|+.+.+.. + +++++|+|++- .|+.... +...--.....|.++.++|+|||.+++.+|+.
T Consensus 39 ~~l~i~gD~l~~L~~-l--~~~svDlI~tD--PPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK-L--PDDSVQLIICD--PPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEECCHHHHHHT-S--CTTCEEEEEEC--CCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred ceEEECCcHHHHHHh-C--ccCCcCEEEEC--CCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 5677 9999887653 3 47799999874 3432220 11000012467888999999999999998865
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.09 E-value=0.3 Score=47.32 Aligned_cols=96 Identities=16% Similarity=0.077 Sum_probs=63.2
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc---ChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |..++.+|+.....+++++|.....++.+++.|.+.+ +.. |..+-+.+.. ....+|.++-
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~v~~~t--~g~g~D~v~d 241 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDI--INYKNGDIVEQILKAT--DGKGVDKVVI 241 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEE--ECGGGSCHHHHHHHHT--TTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceE--EcCCCcCHHHHHHHHc--CCCCCCEEEE
Confidence 367888899986 8888889987643489999987766666777776532 222 2222112222 2346998875
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
....+ ..++...+.|+|+|++.+.
T Consensus 242 ~~g~~--------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 242 AGGDV--------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CSSCT--------------THHHHHHHHEEEEEEEEEC
T ss_pred CCCCh--------------HHHHHHHHHHhcCCEEEEe
Confidence 43222 4578888999999998753
No 330
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.83 E-value=0.15 Score=47.56 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=30.6
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHH
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRD 268 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~ 268 (416)
.+.+|||..||+|..+++.++. +.+++|+|+...+.+
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~ 248 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVN 248 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHH
Confidence 4789999999999999988776 579999997554443
No 331
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.45 E-value=0.73 Score=44.55 Aligned_cols=97 Identities=12% Similarity=0.059 Sum_probs=62.1
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEE--cChhhhhhhhhccC---CCceeEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASY---PGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~--~Da~~l~~~~~~~~---~~s~D~v 303 (416)
.+..||-+|+|. |..++.+|+.. +++++++|.+..-++.+++.|.+.+--.. .|..+-+.+.. . ...+|.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~--~~~~g~g~D~v 244 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERI--RSAIGDLPNVT 244 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHH--HHHSSSCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHh--ccccCCCCCEE
Confidence 367888899986 88888899876 56799999876666666677765321111 12111111111 1 2468988
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+-.-.. +..++...+.|+++|++.+.
T Consensus 245 id~~g~--------------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 245 IDCSGN--------------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp EECSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred EECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 654211 24678888999999998874
No 332
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.30 E-value=1.6 Score=36.07 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=67.3
Q ss_pred CCeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
...++=+||| .++..+|+.. .+..++++|......+.+.+. .+.++.+|+.+. +..-...-...|.+++..+
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~---g~~~i~gd~~~~-~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER---GVRAVLGNAANE-EIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---TCEEEESCTTSH-HHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc---CCCEEECCCCCH-HHHHhcCcccCCEEEEECC
Confidence 3567778885 4555444431 367899999876666655543 457788998653 1110101246888887655
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~ 363 (416)
++- . ...+-...+.+.|+..++.......+.+ .+++.|..
T Consensus 81 ~~~----------~-n~~~~~~a~~~~~~~~iiar~~~~~~~~----~l~~~G~d 120 (140)
T 3fwz_A 81 NGY----------E-AGEIVASARAKNPDIEIIARAHYDDEVA----YITERGAN 120 (140)
T ss_dssp CHH----------H-HHHHHHHHHHHCSSSEEEEEESSHHHHH----HHHHTTCS
T ss_pred ChH----------H-HHHHHHHHHHHCCCCeEEEEECCHHHHH----HHHHCCCC
Confidence 431 1 1234456777889998888877766543 45555543
No 333
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.74 E-value=0.78 Score=44.05 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=63.6
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..||-+|+|. |..++.+|+.. +.+++++|.+..-++.+++.|.+.+ +..+-.++.+.... ..+.+|.++....
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~--i~~~~~~~~~~~~~-~~g~~d~vid~~g 241 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVA--VNARDTDPAAWLQK-EIGGAHGVLVTAV 241 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEE--EETTTSCHHHHHHH-HHSSEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEE--EeCCCcCHHHHHHH-hCCCCCEEEEeCC
Confidence 367888899986 99999999986 5699999987766666777776532 22221222111110 1236888865421
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. ...++...+.|+|+|++.+.
T Consensus 242 ~--------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 242 S--------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp C--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred C--------------HHHHHHHHHHhccCCEEEEe
Confidence 1 36788899999999998874
No 334
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=90.39 E-value=2.1 Score=41.34 Aligned_cols=123 Identities=11% Similarity=0.062 Sum_probs=75.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
..+++|+-||.|.+.+.+.++. -..+.++|+...|.+..+.+- ++.. ++|+.++....+ ..+|+++..+|=.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~-~~~~--~~Di~~~~~~~~----~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNF-GEKP--EGDITQVNEKTI----PDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHH-SCCC--BSCGGGSCGGGS----CCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHc-CCCC--cCCHHHcCHhhC----CCCCEEEECCCCC
Confidence 4789999999999999988763 235788998877776654432 1111 689888743322 2589999887633
Q ss_pred CCCC-cc-----hhh-hhhhHHHHHHHHhhccCCcEEEEE-------eCcHHHHHHHHHHHHhCCCCc
Q 014919 311 DFNR-PE-----HRW-RMVQRSLVEAVSDLLVHDGKVFLQ-------SDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 311 w~k~-~h-----~kr-Rl~~~~~l~~i~r~LkpgG~l~l~-------tD~~~~~~~~~~~~~~~~~~~ 364 (416)
-+.. .. ..| .++ ..+++. .+.++|. .+++. .+....++.+++.|++.|+..
T Consensus 83 ~fS~ag~~~g~~d~r~~L~-~~~~r~-i~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v 147 (327)
T 2c7p_A 83 AFSISGKQKGFEDSRGTLF-FDIARI-VREKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYSF 147 (327)
T ss_dssp TTCTTSCCCGGGSTTSCHH-HHHHHH-HHHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCC
T ss_pred CcchhcccCCCcchhhHHH-HHHHHH-HHhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEE
Confidence 2322 11 111 122 344443 3446885 34443 122356778888899888653
No 335
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=90.30 E-value=0.57 Score=46.75 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=41.2
Q ss_pred CCCeEEEEeccccHHHHHHH-HhCCC-CeEEEEchHHH----HHHHHHH---hCC-CcEEEEEcChh
Q 014919 230 AQPLVVDIGSGNGLFLLGMA-RKRKD-LNFLGLELVTH----CRDSLQL---SGI-TNGYFIATNAT 286 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA-~~~p~-~~~iGvD~~~~----a~~~a~~---~~l-~nv~f~~~Da~ 286 (416)
++.+++|||++.|.++..+| +..+. .+++++|-... ..++.+. ++. +|++++..-+.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 47899999999999999988 56665 79999995333 3333433 246 78887765443
No 336
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.25 E-value=0.88 Score=43.80 Aligned_cols=95 Identities=15% Similarity=0.209 Sum_probs=62.3
Q ss_pred CCeEEEEeccc-cHHHHHHHHhC-CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcCh-hhhhhhhhccCCCceeEEEEEC
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKR-KDLNFLGLELVTHCRDSLQLSGITNGYFIATNA-TSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~-p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da-~~l~~~~~~~~~~s~D~v~~~f 307 (416)
+..||-+|+|. |..++.+|+.. |+++++++|.+..-++.+++.|.+.+ +..+- .+...... ....+|.++-.-
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~--~g~g~D~vid~~ 246 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV--SEMKDAESLINKLT--DGLGASIAIDLV 246 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEE--ECHHHHHHHHHHHH--TTCCEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEE--eccccchHHHHHhh--cCCCccEEEECC
Confidence 68899999975 77888888874 46789999987665666666776533 21111 11212221 223699886542
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.. +..++...+.|+|+|++.+.
T Consensus 247 g~--------------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 247 GT--------------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp CC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CC--------------hHHHHHHHHHhhcCCEEEEe
Confidence 11 24678889999999998764
No 337
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.14 E-value=0.7 Score=45.08 Aligned_cols=95 Identities=12% Similarity=0.118 Sum_probs=61.7
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc-----ChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT-----NATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~-----Da~~l~~~~~~~~~~s~D~v 303 (416)
.+..||-+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+ +.. +..+.+.+.. .+.+|.+
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~~---~~g~D~v 266 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF--VNPNDHSEPISQVLSKMT---NGGVDFS 266 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE--ECGGGCSSCHHHHHHHHH---TSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE--EeccccchhHHHHHHHHh---CCCCCEE
Confidence 367899999876 8888899988643389999976555555666676533 211 1222112222 2478988
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~ 343 (416)
+-.-.. +..++...+.|+++ |++.+.
T Consensus 267 id~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 267 LECVGN--------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp EECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred EECCCC--------------HHHHHHHHHHhhcCCcEEEEE
Confidence 654211 25678889999999 998764
No 338
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.11 E-value=0.63 Score=45.83 Aligned_cols=106 Identities=11% Similarity=0.064 Sum_probs=64.7
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcC----hhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATN----ATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~D----a~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..||-+|||. |.+++.+|+......++++|.+..-++.+++.|.+ .+..+ ..+.+.+.. ....+|.++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~---~i~~~~~~~~~~~v~~~t--~g~g~Dvvi 259 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE---IADLSLDTPLHEQIAALL--GEPEVDCAV 259 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE---EEETTSSSCHHHHHHHHH--SSSCEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc---EEccCCcchHHHHHHHHh--CCCCCCEEE
Confidence 367888899977 88899999987444799999877666677777763 22221 111112222 234699887
Q ss_pred EECCCCCCCC----cchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNR----PEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~----~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.-..+.... .|+. ..+..++...+.|+++|++.+.
T Consensus 260 d~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHE---APATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp ECCCTTCBCSSTTGGGSB---CTTHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCccccccccccccc---chHHHHHHHHHHHhcCCEEEEe
Confidence 5433221000 0000 0124678889999999998763
No 339
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.07 E-value=1.4 Score=43.02 Aligned_cols=100 Identities=20% Similarity=0.152 Sum_probs=64.6
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEE-EEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGY-FIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~-f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+|. |.+++.+|+.....+++++|.+..-++.+++.|.+.+. ....|..+.+.+......+.+|.++-..
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 367888899976 88889999887544899999877666667777765321 1112222221210001234799886532
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.. +..++...+.|+++|++.+.
T Consensus 262 G~--------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 262 GV--------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp CC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CC--------------HHHHHHHHHHhccCCEEEEE
Confidence 11 26788899999999998874
No 340
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.88 E-value=0.55 Score=45.38 Aligned_cols=88 Identities=17% Similarity=0.144 Sum_probs=61.3
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..||=+|+|. |..++.+|+.. +++++++|.+..-++.+++.|.+.+. .+...+ ...+|.++-...
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~--------~~~~D~vid~~g 243 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY---TDPKQC--------KEELDFIISTIP 243 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGC--------CSCEEEEEECCC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHH--------hcCCCEEEECCC
Confidence 467888899986 88889999876 56999999765555566667765443 343322 227898875433
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+ ..++...+.|+|+|++.+.
T Consensus 244 ~~--------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 244 TH--------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp SC--------------CCHHHHHTTEEEEEEEEEC
T ss_pred cH--------------HHHHHHHHHHhcCCEEEEE
Confidence 22 2466778899999998875
No 341
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=89.57 E-value=1.6 Score=42.13 Aligned_cols=128 Identities=10% Similarity=0.011 Sum_probs=74.8
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeE-EEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNF-LGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~-iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
..+++|+-||.|.+...+.+..- -..+ .++|+...|.+..+.+-.. . ++++|+.++..+.++ ...+|+++..+|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-~-~~~~DI~~~~~~~i~--~~~~Dil~ggpP 85 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-E-VQVKNLDSISIKQIE--SLNCNTWFMSPP 85 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-C-CBCCCTTTCCHHHHH--HTCCCEEEECCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-C-cccCChhhcCHHHhc--cCCCCEEEecCC
Confidence 46899999999999999887632 2345 6999988887765543222 2 667898887433332 236899998765
Q ss_pred CCCC--CCcchhhhhh--hHHHHHHHHh-h---c--cCCcEEEEEeCc-----HHHHHHHHHHHHhCCCCc
Q 014919 309 NPDF--NRPEHRWRMV--QRSLVEAVSD-L---L--VHDGKVFLQSDI-----EEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 309 dpw~--k~~h~krRl~--~~~~l~~i~r-~---L--kpgG~l~l~tD~-----~~~~~~~~~~~~~~~~~~ 364 (416)
=.-+ .....++... ...++.++.+ + + +|- .+++. .+ ...++.+++.|++.|+..
T Consensus 86 CQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lE-NV~gl~~~~~~~~i~~~l~~~GY~v 154 (327)
T 3qv2_A 86 CQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIE-NVPLFKESLVFKEIYNILIKNQYYI 154 (327)
T ss_dssp CTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEE-ECGGGGGSHHHHHHHHHHHHTTCEE
T ss_pred ccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEE-chhhhcChHHHHHHHHHHHhCCCEE
Confidence 3223 1000000000 1133444444 4 4 453 33332 22 245777888899888753
No 342
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.57 E-value=1.6 Score=42.33 Aligned_cols=97 Identities=13% Similarity=-0.017 Sum_probs=61.6
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcC---hhhh---hhhhhccCCCceeE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATN---ATST---FRSIVASYPGKLIL 302 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~D---a~~l---~~~~~~~~~~s~D~ 302 (416)
.+..||=+|+|. |.+++.+|+......++++|.+..-++.+++. .+.+.-...+ ..++ +.+.. ....+|.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t--~g~g~Dv 255 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESF--GGIEPAV 255 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHT--SSCCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHh--CCCCCCE
Confidence 356788899977 88899999987444599999766655656555 3333222211 1222 12222 2346898
Q ss_pred EEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 303 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 303 v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++-.... +..++...+.|+++|++.+.
T Consensus 256 vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 256 ALECTGV--------------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp EEECSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCCC--------------hHHHHHHHHHhcCCCEEEEE
Confidence 8653211 25678889999999999874
No 343
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=89.43 E-value=0.71 Score=45.01 Aligned_cols=97 Identities=8% Similarity=-0.044 Sum_probs=62.0
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEE---cChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIA---TNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~---~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+--.. .|..+.+.+.. .+.+|.++-
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t---~gg~Dvvid 267 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKT---NGGVDYAVE 267 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHT---TSCBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHh---CCCCCEEEE
Confidence 367899999975 88888899876434899999765555566667765331111 11222112222 347898865
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~ 343 (416)
.-.. +..++...+.|+++ |++.+.
T Consensus 268 ~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 268 CAGR--------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC--------------HHHHHHHHHHHhcCCCEEEEE
Confidence 3211 25678889999999 998764
No 344
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.34 E-value=0.68 Score=45.15 Aligned_cols=96 Identities=18% Similarity=0.236 Sum_probs=62.7
Q ss_pred CCeEEEEe-cc-ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIG-SG-NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIG-CG-~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+..||=+| +| .|..++.+|+.....+++++|....-++.+++.|.+.+--...|..+.+. ....+.+|.++-...
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~---~~~~~g~Dvvid~~g 248 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVA---ALGLGAPAFVFSTTH 248 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHH---TTCSCCEEEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHH---HhcCCCceEEEECCC
Confidence 56788888 54 48899999987567899999987665666667776533111112211111 112457898864311
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+..++...++|+++|++.+.
T Consensus 249 --------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 --------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp --------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred --------------chhhHHHHHHHhcCCCEEEEE
Confidence 135778899999999998874
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=89.32 E-value=0.91 Score=44.24 Aligned_cols=95 Identities=9% Similarity=0.077 Sum_probs=61.4
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc-----ChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT-----NATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~-----Da~~l~~~~~~~~~~s~D~v 303 (416)
.+..||=+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+ +.. |..+.+.+. ..+.+|.+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~~~~---~~~g~D~v 265 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC--VNPQDYKKPIQEVLTEM---SNGGVDFS 265 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE--ECGGGCSSCHHHHHHHH---TTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE--ecccccchhHHHHHHHH---hCCCCcEE
Confidence 367899999876 8888889988643389999976555555666676532 211 122211221 23478988
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~ 343 (416)
+-.-.. +..++...+.|+++ |++.+.
T Consensus 266 id~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 266 FEVIGR--------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp EECSCC--------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred EECCCC--------------HHHHHHHHHHhhcCCcEEEEe
Confidence 654211 25678889999999 998763
No 346
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=88.80 E-value=0.96 Score=44.13 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=61.4
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEE---cChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIA---TNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~---~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |.+++.+|+.....+++++|.+..-++.+++.|.+.+--.. .|..+.+.+.. .+.+|.++-
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid 271 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELT---AGGVDYSLD 271 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHH---TSCBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHh---CCCccEEEE
Confidence 367899999875 88888999887433899999765555556666765321001 11222112222 247898864
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~ 343 (416)
.-.. +..++...+.|+++ |++.+.
T Consensus 272 ~~G~--------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 272 CAGT--------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC--------------HHHHHHHHHHhhcCCCEEEEE
Confidence 3211 25678889999999 998763
No 347
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.75 E-value=0.84 Score=44.44 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=61.4
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEE---cChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIA---TNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~---~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+--.. .|..+.+.+. ..+.+|.++-
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~---~~~g~D~vid 266 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM---TDGGVDYSFE 266 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHH---TTSCBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHH---hCCCCCEEEE
Confidence 367889999876 78888888876433899999765555556666765331101 1122211222 2347898865
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~ 343 (416)
.... +..++...+.|+++ |++.+.
T Consensus 267 ~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 267 CIGN--------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp CSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCc--------------HHHHHHHHHhhccCCcEEEEE
Confidence 4211 25678889999999 998763
No 348
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.70 E-value=1.1 Score=43.97 Aligned_cols=96 Identities=18% Similarity=0.092 Sum_probs=62.6
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcC---hhhh---hhhhhccCCCceeE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATN---ATST---FRSIVASYPGKLIL 302 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~D---a~~l---~~~~~~~~~~s~D~ 302 (416)
.+..||-+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+ +..+ -.++ +.+.. ....+|.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~~~v~~~~--~g~g~Dv 270 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT--LNRRETSVEERRKAIMDIT--HGRGADF 270 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE--EETTTSCHHHHHHHHHHHT--TTSCEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEE--EeccccCcchHHHHHHHHh--CCCCCcE
Confidence 367899999774 7888889988643699999987666666667776532 3322 1222 12221 1236998
Q ss_pred EEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 303 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 303 v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
++-.-..+ ..++...+.|+++|++.+.
T Consensus 271 vid~~g~~--------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 271 ILEATGDS--------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEECSSCT--------------THHHHHHHHEEEEEEEEEC
T ss_pred EEECCCCH--------------HHHHHHHHHHhcCCEEEEE
Confidence 87542222 4567888999999998764
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.28 E-value=0.93 Score=43.72 Aligned_cols=95 Identities=16% Similarity=0.089 Sum_probs=61.1
Q ss_pred CCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~~~ 306 (416)
+..||-+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+ +..+-.++ +.+.. ....+|.++-.
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~v~~~~--~g~g~D~vid~ 243 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVMDIT--DGNGVDVFLEF 243 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE--ECTTTSCHHHHHHHHT--TTSCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE--ECCCCcCHHHHHHHHc--CCCCCCEEEEC
Confidence 67899999974 7888888887643389999986655566666665432 22211121 11111 12368988754
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.. +..++...+.|+++|++.+.
T Consensus 244 ~g~--------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 244 SGA--------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp SCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 221 25678889999999998764
No 350
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.94 E-value=0.91 Score=44.38 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=62.7
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEE---cChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIA---TNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~---~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+--.. .|..+.+.+. .++.+|.++-
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~---~~gg~D~vid 269 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDL---TDGGVDYSFE 269 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHH---TTSCBSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHh---cCCCCCEEEE
Confidence 367788899975 88888999876444899999766556666666765321111 1222222222 2347998875
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCC-cEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~Lkpg-G~l~l~ 343 (416)
.... +..++...+.|++| |++.+.
T Consensus 270 ~~g~--------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 270 CIGN--------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp CSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCC--------------HHHHHHHHHHhhccCCEEEEE
Confidence 4221 36788899999997 998774
No 351
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.04 E-value=2.6 Score=40.79 Aligned_cols=94 Identities=16% Similarity=0.082 Sum_probs=62.5
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |..++.+|+.. +++++++|.+..-++.+++.|.+.+ +..+..++ +.+.. ....+|.++-
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~v~~~~--~g~g~D~vid 263 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHG--INRLEEDWVERVYALT--GDRGADHILE 263 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHH--TTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEE--EcCCcccHHHHHHHHh--CCCCceEEEE
Confidence 368899999886 88888888876 5699999987655666667776533 22221222 12222 2346998876
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
... + ..++...+.|+|+|++.+.
T Consensus 264 ~~g-~--------------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 264 IAG-G--------------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp ETT-S--------------SCHHHHHHHEEEEEEEEEE
T ss_pred CCC-h--------------HHHHHHHHHhhcCCEEEEE
Confidence 533 1 2356778899999998875
No 352
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.84 E-value=0.88 Score=39.85 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=58.6
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..||.+|+ |.|..+..+++.. +.+++++|......+.+++.+...+ +..+-.+. +.+.. ....+|.++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~--~d~~~~~~~~~~~~~~--~~~~~D~vi 112 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYV--GDSRSVDFADEILELT--DGYGVDVVL 112 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEE--EETTCSTHHHHHHHHT--TTCCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEE--eeCCcHHHHHHHHHHh--CCCCCeEEE
Confidence 3688999994 6677888877764 5789999976555555544454321 22111111 11111 234699887
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
-+- -+ ..++...+.|+|+|++.+..
T Consensus 113 ~~~-g~--------------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 113 NSL-AG--------------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp ECC-CT--------------HHHHHHHHTEEEEEEEEECS
T ss_pred ECC-ch--------------HHHHHHHHHhccCCEEEEEc
Confidence 542 11 45778889999999988753
No 353
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.32 E-value=1.6 Score=41.92 Aligned_cols=98 Identities=12% Similarity=0.159 Sum_probs=60.9
Q ss_pred CCCeEEEEecc--ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCC-CceeEEEEE
Q 014919 230 AQPLVVDIGSG--NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYP-GKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG--~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~-~s~D~v~~~ 306 (416)
.+..+|-+|+| .|..+..+|+...+++++++|.+...++.+++.+.+.+ +-..+ .+.......... +.+|.++-+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV-INASM-QDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE-EETTT-SCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEE-ecCCC-ccHHHHHHHHhcCCCceEEEEC
Confidence 46889999998 67778888887646789999976655555555564422 21112 111111101112 579988654
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.. +..++...+.|+++|++.+.
T Consensus 248 ~g~--------------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 248 NNS--------------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp CCC--------------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 211 24677888999999998764
No 354
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.56 E-value=3.3 Score=39.53 Aligned_cols=98 Identities=12% Similarity=0.024 Sum_probs=61.6
Q ss_pred CCCeEEEEecccc-HHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcE-EEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGNG-LFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNG-YFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~G-~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv-~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+|.+ .++..+|++.-..+++++|.+..-++.+++.+.+.+ ..-..|..+-+.+.. ....+|.++..-
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t--~g~g~d~~~~~~ 240 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKIT--GGLGVQSAIVCA 240 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHT--TSSCEEEEEECC
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhc--CCCCceEEEEec
Confidence 3678888999874 556667777778899999987665666666676532 222233322222222 233566665431
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. .+..+....+.|+++|++.+.
T Consensus 241 ~--------------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 241 V--------------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp S--------------CHHHHHHHHHTEEEEEEEEEC
T ss_pred c--------------CcchhheeheeecCCceEEEE
Confidence 1 136678888999999998764
No 355
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=85.16 E-value=2.4 Score=40.35 Aligned_cols=94 Identities=12% Similarity=0.079 Sum_probs=59.3
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc---ChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..+|-.|| |.|..+..+++.. +++++++|.....++.+++.+...+ +-.. +..+.+.+. ..+.+|.++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~---~~~~~d~vi 219 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKA---SPDGYDCYF 219 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHH---CTTCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEE-EecCCHHHHHHHHHHH---hCCCCeEEE
Confidence 3689999998 6788888888775 5699999976555555555554321 2111 121221221 135789886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+-. ...++...+.|+++|++.+.
T Consensus 220 ~~~g---------------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 220 DNVG---------------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp ESSC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred ECCC---------------hHHHHHHHHHHhcCCEEEEE
Confidence 5421 13467888999999998764
No 356
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.69 E-value=2.3 Score=41.44 Aligned_cols=93 Identities=14% Similarity=0.196 Sum_probs=59.9
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..||-+|+|. |..++.+|+.. +++++++|.+..-++.+++.|.+.+ +..+-.+.... + .+.+|.++-.-.
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~-~---~~g~Dvvid~~g 266 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEV--VNSRNADEMAA-H---LKSFDFILNTVA 266 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEE--EETTCHHHHHT-T---TTCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEE--eccccHHHHHH-h---hcCCCEEEECCC
Confidence 367899999985 88888999876 5689999976554555556675432 22221222121 1 246898865432
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+ ..++...+.|+++|++.+.
T Consensus 267 ~~--------------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 267 AP--------------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp SC--------------CCHHHHHTTEEEEEEEEEC
T ss_pred CH--------------HHHHHHHHHhccCCEEEEe
Confidence 22 2356778899999998764
No 357
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=84.47 E-value=6.9 Score=37.79 Aligned_cols=122 Identities=16% Similarity=0.193 Sum_probs=72.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEch---HHHHHHHHHHh-------C--------------CCcEEEEEcChh
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEL---VTHCRDSLQLS-------G--------------ITNGYFIATNAT 286 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~---~~~a~~~a~~~-------~--------------l~nv~f~~~Da~ 286 (416)
...|+.+|||.......|...+|+..|+-||. ++.-.+.+.+. + .++.+++-+|+.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 57899999999999999998888999999994 22111222221 1 267999999998
Q ss_pred hh--hhhhhcc--CCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEE-EEe--C---cHHHHHHHHHH
Q 014919 287 ST--FRSIVAS--YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF-LQS--D---IEEVMLRMKQQ 356 (416)
Q Consensus 287 ~l--~~~~~~~--~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~-l~t--D---~~~~~~~~~~~ 356 (416)
+. +...+.. .+.....+.+-..-.+..... ...+++.+.+.+ |+|.++ +.. . ...+...|...
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~------~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~ 250 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVISECLLCYMHNNE------SQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSN 250 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH------HHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHH
T ss_pred CcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH------HHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHH
Confidence 74 1111110 123334444444444432221 237777787776 777664 321 1 22455567666
Q ss_pred HHh
Q 014919 357 FLE 359 (416)
Q Consensus 357 ~~~ 359 (416)
+.+
T Consensus 251 l~~ 253 (334)
T 1rjd_A 251 LKE 253 (334)
T ss_dssp HHH
T ss_pred hhc
Confidence 655
No 358
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=84.45 E-value=1.7 Score=41.87 Aligned_cols=94 Identities=19% Similarity=0.176 Sum_probs=60.0
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEE-c---ChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIA-T---NATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~-~---Da~~l~~~~~~~~~~s~D~v 303 (416)
.+..+|-+|+ |.|..+..+|+.. +.+++++|.+....+.+++.+.+. .+. . +..+.+.+.. .+.+|.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~--~~d~~~~~~~~~~~~~~~---~~~~D~v 242 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEV--FIDFTKEKDIVGAVLKAT---DGGAHGV 242 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCE--EEETTTCSCHHHHHHHHH---TSCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCce--EEecCccHhHHHHHHHHh---CCCCCEE
Confidence 4689999999 6788888888875 569999996544444455555432 222 1 2222222222 2368988
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+-+... ...++...+.|+++|++.+.
T Consensus 243 i~~~g~--------------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 243 INVSVS--------------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EECSSC--------------HHHHHHHTTSEEEEEEEEEC
T ss_pred EECCCc--------------HHHHHHHHHHHhcCCEEEEE
Confidence 755221 25678889999999998764
No 359
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.04 E-value=3.9 Score=39.02 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=61.9
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEE-EEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGY-FIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~-f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+|. |.+++.+|+..-...++++|.+..-++.+++.|.+.+- .-..|..+.....- ....+|.++-..
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~--~~~g~d~v~d~~ 237 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLR--ELRFNQLILETA 237 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHG--GGCSSEEEEECS
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhc--ccCCcccccccc
Confidence 467888899975 55677788887666789999877666777777765321 11122222211111 124467665431
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. .+..++...+.|+++|++.+.
T Consensus 238 G--------------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 238 G--------------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp C--------------SHHHHHHHHHHCCTTCEEEEC
T ss_pred c--------------ccchhhhhhheecCCeEEEEE
Confidence 1 136788889999999998874
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=81.57 E-value=3.1 Score=39.90 Aligned_cols=94 Identities=12% Similarity=0.051 Sum_probs=59.9
Q ss_pred CCeEEEE-ecc-ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDI-GSG-NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDI-GCG-~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+..||=+ |+| .|..++.+|+.. ++++++++....-++.+++.|.+.+--...|..+.+.+. ....+|.++-...
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~---~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQ---GIELVDYVFCTFN 226 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHH---TCCCEEEEEESSC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHh---CCCCccEEEECCC
Confidence 6788888 454 488888888875 569999998666566666677553311111222211211 2456998864311
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
.+..++...++|+++|++..
T Consensus 227 --------------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 227 --------------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp --------------HHHHHHHHHHHEEEEEEEEE
T ss_pred --------------chHHHHHHHHHhccCCEEEE
Confidence 13567888999999999865
No 361
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=81.56 E-value=2.5 Score=40.46 Aligned_cols=94 Identities=10% Similarity=0.022 Sum_probs=60.4
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..+|-+|+ |.|..+..+|+.. +++++++|.+...++.+++.+.+.+ +..+-.++ +.+.. ....+|.++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga~~~--~d~~~~~~~~~~~~~~--~~~~~d~vi 240 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLT--GGKGADKVV 240 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEE--EETTSTTHHHHHHHHT--TTTCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEE--EcCCcccHHHHHHHHh--CCCCceEEE
Confidence 3688999998 6788899999876 5699999976655555555665432 22211111 12222 124699886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+-. + ..++...+.|+++|++.+.
T Consensus 241 ~~~g-~--------------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 241 DHTG-A--------------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp ESSC-S--------------SSHHHHHHHEEEEEEEEES
T ss_pred ECCC-H--------------HHHHHHHHhhccCCEEEEE
Confidence 5432 1 2356778899999998764
No 362
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=81.40 E-value=2.8 Score=40.47 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=57.9
Q ss_pred CeEEEEeccc-cHHH-HHHH-HhCCCCe-EEEEchHHH---HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 232 PLVVDIGSGN-GLFL-LGMA-RKRKDLN-FLGLELVTH---CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~-~~lA-~~~p~~~-~iGvD~~~~---a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
..||=+|+|. |.++ +.+| +.. +++ ++++|.+.. -++.+++.|.+.+.....|..+ +.+. .+.+|.++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~----~gg~Dvvi 247 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDV----YEQMDFIY 247 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHH----SCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHh----CCCCCEEE
Confidence 7899999864 7777 8888 765 455 999997654 4555666675433000112222 1211 23689886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.... +..++...+.|+++|++.+.
T Consensus 248 d~~g~--------------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 248 EATGF--------------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp ECSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCC--------------hHHHHHHHHHHhcCCEEEEE
Confidence 43211 24678889999999998764
No 363
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=81.21 E-value=11 Score=30.67 Aligned_cols=109 Identities=14% Similarity=0.039 Sum_probs=62.5
Q ss_pred CeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
..++=+||| .++..+|+.. .+.+++++|......+.+...+ +.++.+|+.+. ...-...-...|.+++..++
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~---~~~~~gd~~~~-~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG---FDAVIADPTDE-SFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT---CEEEECCTTCH-HHHHHSCCTTCSEEEECCSC
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC---CcEEECCCCCH-HHHHhCCcccCCEEEEecCC
Confidence 567888885 4666555532 3678999998665555554433 57788988763 11111123468888876442
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~ 362 (416)
. . . ...+....+.+. ...++.......+.+ .+++.|.
T Consensus 81 ~------~----~-n~~~~~~a~~~~-~~~iia~~~~~~~~~----~l~~~G~ 117 (141)
T 3llv_A 81 D------E----F-NLKILKALRSVS-DVYAIVRVSSPKKKE----EFEEAGA 117 (141)
T ss_dssp H------H----H-HHHHHHHHHHHC-CCCEEEEESCGGGHH----HHHHTTC
T ss_pred H------H----H-HHHHHHHHHHhC-CceEEEEEcChhHHH----HHHHcCC
Confidence 2 1 1 133445555666 666666665555433 3455554
No 364
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=81.10 E-value=5.4 Score=38.11 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=60.3
Q ss_pred CCCeEEEEecc-ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSG-NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG-~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..||-+|+| .|..++.+|+.. +++++++|.+..-++.+++.|.+.+ +..+-.++........ +.+|.++-...
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~--~d~~~~~~~~~~~~~~-~~~d~vid~~g 239 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLV--VNPLKEDAAKFMKEKV-GGVHAAVVTAV 239 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEE--ECTTTSCHHHHHHHHH-SSEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEE--ecCCCccHHHHHHHHh-CCCCEEEECCC
Confidence 36789999996 488888888876 5699999976655566666665422 2111111111110001 46898865421
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. +..++...+.|+++|++.+.
T Consensus 240 ~--------------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 240 S--------------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp C--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred C--------------HHHHHHHHHHhhcCCEEEEe
Confidence 1 25678888999999998764
No 365
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.86 E-value=3.4 Score=40.67 Aligned_cols=97 Identities=14% Similarity=0.084 Sum_probs=59.9
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc---ChhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+|. |..++.+|+.....+++++|.+..-++.+++.|.+.+ +.. |..+.+.+.. ....+|.++-
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~i~~~t--~g~g~D~vid 288 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV--IDPTKENFVEAVLDYT--NGLGAKLFLE 288 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE--ECTTTSCHHHHHHHHT--TTCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE--EcCCCCCHHHHHHHHh--CCCCCCEEEE
Confidence 367788899876 7888889988744499999987766666677775532 222 2222112222 2336898875
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhc----cCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLL----VHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~L----kpgG~l~l~ 343 (416)
.-..+ ...+..+.+.| +++|++.+.
T Consensus 289 ~~g~~-------------~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 289 ATGVP-------------QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp CSSCH-------------HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CCCCc-------------HHHHHHHHHHHHhccCCCcEEEEe
Confidence 42211 12445555556 999998874
No 366
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=80.77 E-value=3 Score=39.65 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=54.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCe-EEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLN-FLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~-~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
...+++|+=||.|.+...+.+..-+.. +.++|+...|.+..+.+ .++..++.+|+.++....++ ..+.+|+++..+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N-~~~~~~~~~DI~~i~~~~i~-~~~~~Dll~ggpP 92 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-HQGKIMYVGDVRSVTQKHIQ-EWGPFDLVIGGSP 92 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH-TTTCEEEECCGGGCCHHHHH-HTCCCSEEEECCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh-CCCCceeCCChHHccHHHhc-ccCCcCEEEecCC
Confidence 356899999999999998887632333 58999988777655443 34556788999887433332 1246899988764
No 367
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=80.53 E-value=4.9 Score=38.17 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=61.2
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHH-HHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSL-QLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a-~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+..||-+|| |.|..+..+|+.. +++++++|.+...++.+ ++.+.+.+ +..+-.++.........+.+|.++-+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGA--IDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEE--EETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEE--EECCCHHHHHHHHHhcCCCceEEEEC
Confidence 4689999998 6788888888875 56999999766555555 55565422 22211222111111123568987643
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-. ...++...+.|+++|++.+.
T Consensus 226 ~g---------------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 226 VG---------------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp SC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred CC---------------cchHHHHHHHHhhCCEEEEE
Confidence 11 14678888999999998874
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=80.40 E-value=3.1 Score=39.95 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=59.9
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcC--hhhhhhhhhccCCCceeEEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATN--ATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~D--a~~l~~~~~~~~~~s~D~v~~ 305 (416)
.+..||=+|+ |.|..+..+|+.. ++++++++....-++.+++.|.+.+ +..+ ..+.+.+.. ....+|.++-
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v--~~~~~~~~~~v~~~~--~~~g~Dvvid 233 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIV--LPLEEGWAKAVREAT--GGAGVDMVVD 233 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEE--EESSTTHHHHHHHHT--TTSCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEE--ecCchhHHHHHHHHh--CCCCceEEEE
Confidence 4688999997 6688899999876 5699999975544455556665533 2222 222112222 2336998865
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.-.. ..++...+.|+++|++.+.
T Consensus 234 ~~g~---------------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 234 PIGG---------------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp SCC-----------------CHHHHHHTEEEEEEEEEC
T ss_pred CCch---------------hHHHHHHHhhcCCCEEEEE
Confidence 4221 2356778899999998874
No 369
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=80.00 E-value=3.4 Score=39.45 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=60.1
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHH-HhCCCcEEEEEc---ChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQ-LSGITNGYFIAT---NATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~-~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D~v 303 (416)
.+..||-+|| |.|..+..+|+.. +++++++|.+...++.++ +.|...+ +-.. +..+.+... ..+.+|.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~---~~~~~d~v 229 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRC---FPNGIDIY 229 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHH---CTTCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHH---hCCCCcEE
Confidence 3688999998 6788888888876 569999997665555554 3454322 1111 222222221 13568988
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+-+.. ...++...+.|+++|++.+.
T Consensus 230 i~~~g---------------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 230 FENVG---------------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EESSC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred EECCC---------------HHHHHHHHHHHhcCCEEEEE
Confidence 65421 14577888999999998764
No 370
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=79.21 E-value=1.8 Score=41.50 Aligned_cols=94 Identities=9% Similarity=0.025 Sum_probs=57.9
Q ss_pred CCCeEEEEecc--ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSG--NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG--~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..||=+|+| .|..+..+|+.. +++++++|.+..-++.+++.|.+.+ +..+-.++ +.+.. ....+|.++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~--~~~~~~~~~~~~~~~~--~~~g~Dvvi 218 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYV--IDTSTAPLYETVMELT--NGIGADAAI 218 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEE--EETTTSCHHHHHHHHT--TTSCEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEE--EeCCcccHHHHHHHHh--CCCCCcEEE
Confidence 46899999986 688888888876 5699999975544455555665422 22211122 12222 234799886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-.-.. ..+....+.|+++|++.+.
T Consensus 219 d~~g~---------------~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 219 DSIGG---------------PDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp ESSCH---------------HHHHHHHHTEEEEEEEEEC
T ss_pred ECCCC---------------hhHHHHHHHhcCCCEEEEE
Confidence 53211 2233445899999998874
No 371
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=79.15 E-value=5.2 Score=38.54 Aligned_cols=94 Identities=19% Similarity=0.190 Sum_probs=59.5
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..||-.|+ |.|..+..+|+.. ++++++++.+...++.+++.+.+.+ +..+-.++ +.+.. ....+|.++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~--~d~~~~~~~~~~~~~~--~~~~~D~vi 244 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEV--FNHREVNYIDKIKKYV--GEKGIDIII 244 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEE--EETTSTTHHHHHHHHH--CTTCEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEE--EeCCCchHHHHHHHHc--CCCCcEEEE
Confidence 3688999997 6788888888875 5799999976655555555565422 22211121 12222 234689886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+.. ...+....+.|+++|++.+.
T Consensus 245 ~~~G---------------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 245 EMLA---------------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp ESCH---------------HHHHHHHHHHEEEEEEEEEC
T ss_pred ECCC---------------hHHHHHHHHhccCCCEEEEE
Confidence 4411 13467788999999998764
No 372
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=78.49 E-value=8.6 Score=31.90 Aligned_cols=113 Identities=9% Similarity=0.010 Sum_probs=64.4
Q ss_pred CeEEEEeccccHHHHHHHHhC--CCCeEEEEchH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
..++=+|| |..+..+++.. .+.+++.+|.. ....+........++.++.+|+.+. ...-...-...|.|++..+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~-~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDS-SVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSH-HHHHHHTTTTCSEEEECSS
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCH-HHHHHcChhhCCEEEEecC
Confidence 44665665 77777766542 35789999974 3222222221123578899998653 1110111346788877644
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~ 362 (416)
+. . ....+....+.+.|...++...++..+.+ .++..|.
T Consensus 81 ~d------~-----~n~~~~~~a~~~~~~~~ii~~~~~~~~~~----~l~~~G~ 119 (153)
T 1id1_A 81 ND------A-----DNAFVVLSAKDMSSDVKTVLAVSDSKNLN----KIKMVHP 119 (153)
T ss_dssp CH------H-----HHHHHHHHHHHHTSSSCEEEECSSGGGHH----HHHTTCC
T ss_pred Ch------H-----HHHHHHHHHHHHCCCCEEEEEECCHHHHH----HHHHcCC
Confidence 32 1 12455667777888888888777666543 3445454
No 373
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.11 E-value=9 Score=38.06 Aligned_cols=104 Identities=12% Similarity=0.039 Sum_probs=64.8
Q ss_pred CCeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
...|+=+|| |.++..+|+.. .+..|+.||......+.++..+ +.++.+|+.+. +-.-...-...|.|++..+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g---~~vi~GDat~~-~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFG---MKVFYGDATRM-DLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTT---CCCEESCTTCH-HHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCC---CeEEEcCCCCH-HHHHhcCCCccCEEEECCC
Confidence 355777777 55655555432 3678999998766666665544 45788999774 1111112356888887665
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHH
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVML 351 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~ 351 (416)
++. ....+-...+.+.|+..++..+.+.....
T Consensus 78 ~~~-----------~n~~i~~~ar~~~p~~~Iiara~~~~~~~ 109 (413)
T 3l9w_A 78 DPQ-----------TNLQLTEMVKEHFPHLQIIARARDVDHYI 109 (413)
T ss_dssp SHH-----------HHHHHHHHHHHHCTTCEEEEEESSHHHHH
T ss_pred ChH-----------HHHHHHHHHHHhCCCCeEEEEECCHHHHH
Confidence 431 12445667788889988888776555433
No 374
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=77.37 E-value=11 Score=33.29 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=59.4
Q ss_pred EEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCC
Q 014919 234 VVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPD 311 (416)
Q Consensus 234 vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw 311 (416)
|+=+| .|.++..+|+.. .+..++.+|......+.+.+. .++.++.+|+.+. ...-...-...|.+++..++.-
T Consensus 3 iiIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~--~~~~~i~gd~~~~-~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 3 VIIIG--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK--LKATIIHGDGSHK-EILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp EEEEC--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH--SSSEEEESCTTSH-HHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEC--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--cCCeEEEcCCCCH-HHHHhcCcccCCEEEEecCCcH
Confidence 34455 477777777642 367899999765544443222 2467889998763 1110111346788887654331
Q ss_pred CCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHH
Q 014919 312 FNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVML 351 (416)
Q Consensus 312 ~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~ 351 (416)
...++....+.+.|...++....+..+.+
T Consensus 78 -----------~n~~~~~~a~~~~~~~~iia~~~~~~~~~ 106 (218)
T 3l4b_C 78 -----------VNLFIAQLVMKDFGVKRVVSLVNDPGNME 106 (218)
T ss_dssp -----------HHHHHHHHHHHTSCCCEEEECCCSGGGHH
T ss_pred -----------HHHHHHHHHHHHcCCCeEEEEEeCcchHH
Confidence 12455666677777777777665555433
No 375
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=77.36 E-value=1.9 Score=41.74 Aligned_cols=127 Identities=11% Similarity=0.081 Sum_probs=75.6
Q ss_pred CeEEEEeccccHHHHHHHHhCCC-CeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 232 PLVVDIGSGNGLFLLGMARKRKD-LNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~p~-~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
-+++|+-||.|.+...+.+..-+ ..+.++|+...|.+..+.+ .++..++.+|+.++....++ ...+|+++..+|=.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N-~~~~~~~~~DI~~~~~~~~~--~~~~D~l~ggpPCQ 80 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHN-FPETNLLNRNIQQLTPQVIK--KWNVDTILMSPPCQ 80 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH-CTTSCEECCCGGGCCHHHHH--HTTCCEEEECCCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHh-CCCCceeccccccCCHHHhc--cCCCCEEEecCCCc
Confidence 46999999999999998876322 3578999988887765543 33455778999887433332 34689998876522
Q ss_pred CCC-Ccch-----hh-hhhhHHHHHHHHhhcc-CCcEEEEEe----CcHHHHHHHHHHHHhCCCCc
Q 014919 311 DFN-RPEH-----RW-RMVQRSLVEAVSDLLV-HDGKVFLQS----DIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 311 w~k-~~h~-----kr-Rl~~~~~l~~i~r~Lk-pgG~l~l~t----D~~~~~~~~~~~~~~~~~~~ 364 (416)
-+. .... .| .++ ..+++ +.+.++ |- .+++.. -....++.+++.|++.|+..
T Consensus 81 ~fS~ag~~~~~~d~r~~L~-~~~~r-~i~~~~~P~-~~vlENV~gl~~~~~~~~i~~~l~~~GY~v 143 (333)
T 4h0n_A 81 PFTRNGKYLDDNDPRTNSF-LYLIG-ILDQLDNVD-YILMENVKGFENSTVRNLFIDKLKECNFIY 143 (333)
T ss_dssp CSEETTEECCTTCTTSCCH-HHHHH-HGGGCTTCC-EEEEEECTTGGGSHHHHHHHHHHHHTTEEE
T ss_pred chhhhhhccCCcCcccccH-HHHHH-HHHHhcCCC-EEEEecchhhhhhhHHHHHHHHHHhCCCeE
Confidence 221 1111 11 122 23333 333444 63 333321 01234677888888887653
No 376
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=77.31 E-value=8.3 Score=36.80 Aligned_cols=70 Identities=10% Similarity=0.046 Sum_probs=46.4
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
-++-=||||. |. +.+...+..|+.+++|| |.. +++.+.+++.+.++ ...|..+++. +..+|.|++.-
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~------~~~iDaV~I~t 94 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLA------SDVIDAVYIPL 94 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHH------CSSCSEEEECS
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhc------CCCCCEEEEeC
Confidence 3567799986 53 33445566799999986 653 44555566677653 3467777642 56799999875
Q ss_pred CCC
Q 014919 308 PNP 310 (416)
Q Consensus 308 pdp 310 (416)
|++
T Consensus 95 P~~ 97 (350)
T 4had_A 95 PTS 97 (350)
T ss_dssp CGG
T ss_pred CCc
Confidence 554
No 377
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=77.21 E-value=8.9 Score=37.48 Aligned_cols=109 Identities=16% Similarity=0.271 Sum_probs=71.7
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEc--hHHHHH-HHHHHhCCCc--EEEEEcChhhhhhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLE--LVTHCR-DSLQLSGITN--GYFIATNATSTFRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD--~~~~a~-~~a~~~~l~n--v~f~~~Da~~l~~~~~~~~~~s~D~v~~ 305 (416)
+..||.|+.+.|..+..++...| ..+ -| ++..|. .+++.+++++ +++...-. . .+..+|.|.+
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~--~~~-~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~--------~~~~~~~v~~ 106 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKP--YSI-GDSYISELATRENLRLNGIDESSVKFLDSTA-D--------YPQQPGVVLI 106 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCC--EEE-ESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-C--------CCSSCSEEEE
T ss_pred CCCEEEECCCCCHHHHhhccCCc--eEE-EhHHHHHHHHHHHHHHcCCCccceEeccccc-c--------cccCCCEEEE
Confidence 45799999999999999986533 222 36 344443 4566777764 66653311 1 2567999988
Q ss_pred ECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhC
Q 014919 306 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 306 ~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~ 360 (416)
..| |. +..+ ...|..+...|+||+.++...++......+.+.|++.
T Consensus 107 ~lp----k~---~~~l--~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~ 152 (375)
T 4dcm_A 107 KVP----KT---LALL--EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 152 (375)
T ss_dssp ECC----SC---HHHH--HHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHH
T ss_pred EcC----CC---HHHH--HHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhh
Confidence 754 22 1112 3678899999999999988877665555556666654
No 378
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=76.49 E-value=18 Score=32.24 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=61.0
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC--CeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD--LNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~--~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
...++=+|| |.++..+|+..-. . ++++|......+.+. .++.++.+|+.+. ...-...-...|.+++..+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~-~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR----SGANFVHGDPTRV-SDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----TTCEEEESCTTCH-HHHHHTTCTTCSEEEECCS
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----cCCeEEEcCCCCH-HHHHhcCcchhcEEEEcCC
Confidence 356777777 6788888876543 4 899997654444433 4578999998753 1110111346788877644
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHH
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 350 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~ 350 (416)
+. . . ........+.+.|+..++....+..+.
T Consensus 81 ~d------~----~-n~~~~~~a~~~~~~~~iia~~~~~~~~ 111 (234)
T 2aef_A 81 SD------S----E-TIHCILGIRKIDESVRIIAEAERYENI 111 (234)
T ss_dssp CH------H----H-HHHHHHHHHHHCSSSEEEEECSSGGGH
T ss_pred Cc------H----H-HHHHHHHHHHHCCCCeEEEEECCHhHH
Confidence 32 0 1 134556677788887877776555543
No 379
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=74.91 E-value=2.9 Score=40.37 Aligned_cols=93 Identities=12% Similarity=0.028 Sum_probs=57.6
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChh-hhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNAT-STFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~-~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||-+|+|. |..++.+|+.. +++++++|.+..-++.+++.|.+.+ +..+-. ++.. .+ .+.+|.++-..
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~~~-~~---~~~~D~vid~~ 251 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHY--IATLEEGDWGE-KY---FDTFDLIVVCA 251 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEE--EEGGGTSCHHH-HS---CSCEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCCEE--EcCcCchHHHH-Hh---hcCCCEEEECC
Confidence 368999999865 78888888875 5689999975544455555665533 222111 2211 11 24689887654
Q ss_pred CC--CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PN--PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pd--pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.. + ..++...+.|+++|++.+.
T Consensus 252 g~~~~--------------~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 252 SSLTD--------------IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp SCSTT--------------CCTTTGGGGEEEEEEEEEC
T ss_pred CCCcH--------------HHHHHHHHHhcCCCEEEEe
Confidence 33 2 1234556788999987753
No 380
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.69 E-value=3.4 Score=39.56 Aligned_cols=96 Identities=10% Similarity=0.019 Sum_probs=57.1
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCC-eEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDL-NFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~-~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||-+|+|. |..++.+|+.. ++ +++++|.+..-++.+++. .+ .++..+-.++...........+|.++-.-
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~--~v~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-AD--RLVNPLEEDLLEVVRRVTGSGVEVLLEFS 239 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CS--EEECTTTSCHHHHHHHHHSSCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HH--hccCcCccCHHHHHHHhcCCCCCEEEECC
Confidence 367899999865 77888888876 45 899999765444443332 22 22222111111111000134689886542
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.. +..++...+.|+++|++.+.
T Consensus 240 g~--------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 240 GN--------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp CC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 21 25678889999999998764
No 381
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=73.53 E-value=4.2 Score=38.50 Aligned_cols=96 Identities=15% Similarity=0.030 Sum_probs=58.6
Q ss_pred CCCeEEEEe--ccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhcc-CCCceeEEEEE
Q 014919 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVAS-YPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIG--CG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~-~~~s~D~v~~~ 306 (416)
.+..||-.| .|.|..+..+|+.. +++++++|.....++.+++.+.+.+ +..+-.+........ ....+|.++-+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEE--EECCCccHHHHHHHHhCCCCceEEEEC
Confidence 368899999 56788888888765 5699999976555555555554422 221111111111110 23468988654
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-. + ..++...+.|+++|++.+.
T Consensus 217 ~g-~--------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 217 VG-R--------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp SC-G--------------GGHHHHHHTEEEEEEEEEC
T ss_pred Cc-h--------------HHHHHHHHHhcCCCEEEEE
Confidence 22 1 3467788899999998764
No 382
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=73.29 E-value=6.9 Score=37.44 Aligned_cols=94 Identities=14% Similarity=0.006 Sum_probs=58.9
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+ |.|..++.+|+.. +++++++ .+..-++.+++.|.+.+. ...|..+.+.+.. ....+|.++-.-
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~--~~~g~D~vid~~ 224 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHT--AGQGFDLVYDTL 224 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHH--TTSCEEEEEESS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHh--cCCCceEEEECC
Confidence 4688999994 4688888899875 5689999 655555566666754311 1111222112222 234699876431
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. ...++...+.|+++|++.+.
T Consensus 225 g---------------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 225 G---------------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp C---------------THHHHHHHHHEEEEEEEEES
T ss_pred C---------------cHHHHHHHHHHhcCCeEEEE
Confidence 1 14577888899999998863
No 383
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=72.40 E-value=5.4 Score=37.90 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=60.1
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..||=+|+ |.|..+..+|+.. ++++++++....-++.+++.|.+. .+..+-.++ +.+.. ....+|.++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~--~~~~~~~~~~~~~~~~~--~~~g~D~vi 222 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEY--LINASKEDILRQVLKFT--NGKGVDASF 222 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSE--EEETTTSCHHHHHHHHT--TTSCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcE--EEeCCCchHHHHHHHHh--CCCCceEEE
Confidence 4688999994 6688888888875 569999998665555666666442 222221222 12222 234699886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+-.. ..++...+.|+++|++.+.
T Consensus 223 d~~g~---------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 223 DSVGK---------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp ECCGG---------------GGHHHHHHHEEEEEEEEEC
T ss_pred ECCCh---------------HHHHHHHHHhccCCEEEEE
Confidence 54211 3466778899999998874
No 384
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=72.23 E-value=6.4 Score=37.97 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=57.5
Q ss_pred CCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHH---HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVT---HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~---~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
+..||=+|+|. |..++.+|+.. +++++++|.+. .-++.+++.|.+.+ -..|..+.+.+ . .+.+|.++-.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~~~~~~~~~~~-~---~~~~d~vid~ 253 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETKTNYY--NSSNGYDKLKD-S---VGKFDVIIDA 253 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHTCEEE--ECTTCSHHHHH-H---HCCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhCCcee--chHHHHHHHHH-h---CCCCCEEEEC
Confidence 67899999854 66777777765 45999999764 44455566665433 11111111111 1 1468988755
Q ss_pred CCCCCCCCcchhhhhhhHHHH-HHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLV-EAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l-~~i~r~LkpgG~l~l~ 343 (416)
-..+ ..+ +...+.|+++|++.+.
T Consensus 254 ~g~~--------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 254 TGAD--------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CCCC--------------THHHHHHGGGEEEEEEEEEC
T ss_pred CCCh--------------HHHHHHHHHHHhcCCEEEEE
Confidence 3322 345 7888999999998764
No 385
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=70.93 E-value=14 Score=35.50 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=60.9
Q ss_pred CCCeEEEEe--ccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc---ChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIG--CG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D~v~ 304 (416)
.+..||=+| .|.|..++.+|+.. ++++++++.....++.+++.|.+.+ +.. |..+.+... ....+|.++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~~~~~---~~~g~D~vi 236 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRP--INYKTEPVGTVLKQE---YPEGVDVVY 236 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEE--EETTTSCHHHHHHHH---CTTCEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEE--EecCChhHHHHHHHh---cCCCCCEEE
Confidence 368899999 56788899999876 5699999986655555666665432 222 221211211 134689886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-... ...++...+.|+++|++.+.
T Consensus 237 d~~g---------------~~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 237 ESVG---------------GAMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp ECSC---------------THHHHHHHHHEEEEEEEEEC
T ss_pred ECCC---------------HHHHHHHHHHHhcCCEEEEE
Confidence 5421 14567888999999998874
No 386
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=69.31 E-value=27 Score=33.53 Aligned_cols=107 Identities=20% Similarity=0.256 Sum_probs=58.5
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
-+|.=||||. |..........|+.+++++ |......+.++..+.. ...|..+++ .+..+|.|++.-|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~----~~~~~~~ll------~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLK----IYESYEAVL------ADEKVDAVLIATPN 75 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCC----BCSCHHHHH------HCTTCCEEEECSCG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCc----eeCCHHHHh------cCCCCCEEEEcCCc
Confidence 4577799985 4333344455688888886 7654433444444432 235666653 24578999987554
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~ 362 (416)
.. | .+.+.++|+.|-.+++. +....-.+.+.+..++.+.
T Consensus 76 ~~----h----------~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~ 117 (359)
T 3e18_A 76 DS----H----------KELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNK 117 (359)
T ss_dssp GG----H----------HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred HH----H----------HHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCC
Confidence 32 1 22334555555445543 2233345555555555544
No 387
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=69.05 E-value=35 Score=32.09 Aligned_cols=106 Identities=9% Similarity=0.047 Sum_probs=59.6
Q ss_pred eEEEEeccc-cHHHHHHHHhCCCCeEEE-EchHHH-HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 233 LVVDIGSGN-GLFLLGMARKRKDLNFLG-LELVTH-CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 233 ~vLDIGCG~-G~~~~~lA~~~p~~~~iG-vD~~~~-a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
+|.=||||. |........+.|+.++++ .|.... +.+.+++.+. . ..|..+++. +..+|.|++.-|+
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~---~--~~~~~~~l~------~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGC---E--VRTIDAIEA------AADIDAVVICTPT 73 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC---E--ECCHHHHHH------CTTCCEEEECSCG
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCC---C--cCCHHHHhc------CCCCCEEEEeCCc
Confidence 466789976 444444444568888886 576443 3333444443 3 466666632 4468999886554
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
.+ | .+.+...|+.|-.+++. +....-.+.+.+..++.+..
T Consensus 74 ~~----h----------~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 74 DT----H----------ADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp GG----H----------HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred hh----H----------HHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 32 1 22334456666555552 23344456666666666643
No 388
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=69.02 E-value=11 Score=35.64 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=58.7
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..+|-.|+ |.|..+..+++.. +++++++|.....++.+++.+.+.+ +..+-.+. +.+.. ....+|.++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~~~~--~d~~~~~~~~~i~~~~--~~~~~d~vi 219 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHT--INYSTQDFAEVVREIT--GGKGVDVVY 219 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHH--TTCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEE--EECCCHHHHHHHHHHh--CCCCCeEEE
Confidence 3678999995 6788888888876 5699999976654555555554422 22211111 11112 234689886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+-.. ..++...+.|+++|++.+.
T Consensus 220 ~~~g~---------------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 220 DSIGK---------------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp ECSCT---------------TTHHHHHHTEEEEEEEEEC
T ss_pred ECCcH---------------HHHHHHHHhhccCCEEEEE
Confidence 54211 2356778899999998764
No 389
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=68.44 E-value=5.1 Score=37.99 Aligned_cols=94 Identities=12% Similarity=0.010 Sum_probs=59.9
Q ss_pred CCCeEEEEe--ccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIG--CG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..||=+| .|.|..+..+|+.. ++++++++.+..-++.+++.|.+.+ +..+-.++ +.+.. ....+|.++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~~~~~~--~~~g~Dvvi 214 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWET--IDYSHEDVAKRVLELT--DGKKCPVVY 214 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHT--TTCCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEE--EeCCCccHHHHHHHHh--CCCCceEEE
Confidence 367899888 35688888888875 5699999976655566666665422 22221222 12222 234699886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+... ..++...+.|+++|++.+.
T Consensus 215 d~~g~---------------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 215 DGVGQ---------------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp ESSCG---------------GGHHHHHTTEEEEEEEEEC
T ss_pred ECCCh---------------HHHHHHHHHhcCCCEEEEE
Confidence 53211 3456778899999998875
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=68.18 E-value=53 Score=27.66 Aligned_cols=104 Identities=15% Similarity=0.137 Sum_probs=59.4
Q ss_pred CCeEEEEeccccHHHHHHHHhC--C-CCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhcc-CCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR--K-DLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVAS-YPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~--p-~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~-~~~s~D~v~~~ 306 (416)
+..|+=+||| ..+..+|+.. . +.+++++|......+.+...+ +.++.+|..+. +..-.. .-...|.|++.
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g---~~~~~gd~~~~-~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSEG---RNVISGDATDP-DFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTT---CCEEECCTTCH-HHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCC---CCEEEcCCCCH-HHHHhccCCCCCCEEEEe
Confidence 4567778875 5555554432 2 568999997665555554444 45667777542 111111 12458888876
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHH
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVML 351 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~ 351 (416)
.+++- .+ ..+-...+.+.|+..++..+......+
T Consensus 113 ~~~~~----------~~-~~~~~~~~~~~~~~~ii~~~~~~~~~~ 146 (183)
T 3c85_A 113 MPHHQ----------GN-QTALEQLQRRNYKGQIAAIAEYPDQLE 146 (183)
T ss_dssp CSSHH----------HH-HHHHHHHHHTTCCSEEEEEESSHHHHH
T ss_pred CCChH----------HH-HHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 54321 11 223345667778888888877665543
No 391
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=66.45 E-value=5.1 Score=38.30 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHH
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSL 270 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a 270 (416)
.+.+|||-=||+|..+.+..+. +.+++|+|+...+.+.+
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~ 290 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAAS 290 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHH
Confidence 4789999999999998887666 67999999866554443
No 392
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=65.63 E-value=9.2 Score=36.70 Aligned_cols=94 Identities=15% Similarity=-0.015 Sum_probs=58.4
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~ 304 (416)
.+..||-+|+ |.|..+..+|+.. +++++++|.+...++.+++.+.+. .+..+-.++ +.+.. ....+|.++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~--~~~~~d~vi 236 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAA--GFNYKKEDFSEATLKFT--KGAGVNLIL 236 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSE--EEETTTSCHHHHHHHHT--TTSCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcE--EEecCChHHHHHHHHHh--cCCCceEEE
Confidence 3678999984 6788888888875 579999997655555555556442 222221121 11112 234689886
Q ss_pred EECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 305 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 305 ~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-+-.. ..++...++|+++|++.+.
T Consensus 237 ~~~G~---------------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 237 DCIGG---------------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp ESSCG---------------GGHHHHHHHEEEEEEEEEC
T ss_pred ECCCc---------------hHHHHHHHhccCCCEEEEE
Confidence 54211 2356678899999998874
No 393
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=65.30 E-value=21 Score=33.95 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=57.0
Q ss_pred CeEEEEec--cccHHHHHHHHhCCCC-eEEEEchHHHHHHHHHH-hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGS--GNGLFLLGMARKRKDL-NFLGLELVTHCRDSLQL-SGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGC--G~G~~~~~lA~~~p~~-~~iGvD~~~~a~~~a~~-~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
..||=.|+ |.|..+..+|+.. ++ +++++|.....++.+.+ .+.+. .+..+-.++.........+.+|.++-+-
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~--~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDA--AINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSE--EEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCce--EEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 88999998 6677888888875 55 99999976544454444 45432 2222111111111111123688886541
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. ...++...+.|+++|++.+.
T Consensus 239 G---------------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 239 G---------------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp C---------------HHHHHHHHHTEEEEEEEEEC
T ss_pred C---------------HHHHHHHHHHhccCcEEEEE
Confidence 1 14577888999999998764
No 394
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=64.97 E-value=23 Score=34.09 Aligned_cols=96 Identities=13% Similarity=-0.003 Sum_probs=59.1
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+ |.|..++.+|+.. +++++++. +..-++.+++.|.+.+ +...-.++.+......++.+|.++-..
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v--i~~~~~~~~~~v~~~t~g~~d~v~d~~ 239 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGAEEV--FDYRAPNLAQTIRTYTKNNLRYALDCI 239 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEE--EETTSTTHHHHHHHHTTTCCCEEEESS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCCcEE--EECCCchHHHHHHHHccCCccEEEECC
Confidence 4678999998 3799999999886 56888884 4443455566675432 222222221111111234599886432
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhc-cCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLL-VHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~L-kpgG~l~l~ 343 (416)
.. +..++...+.| +++|++.+.
T Consensus 240 g~--------------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 240 TN--------------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CS--------------HHHHHHHHHHSCTTCEEEEES
T ss_pred Cc--------------hHHHHHHHHHhhcCCCEEEEE
Confidence 11 25677888899 699998763
No 395
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=64.93 E-value=14 Score=34.33 Aligned_cols=90 Identities=19% Similarity=0.111 Sum_probs=57.7
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcCh-hhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNA-TSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da-~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+..||-+|+ |.|..+..+|+.. +++++++|.+...++.+++.|.+.+ +..+- .++.+ .+ ..+|.++-
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~--~~~~~~~~~~~-~~----~~~d~vid- 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEA--ATYAEVPERAK-AW----GGLDLVLE- 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEE--EEGGGHHHHHH-HT----TSEEEEEE-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEE--EECCcchhHHH-Hh----cCceEEEE-
Confidence 3689999998 5688889999876 5699999975444444555565432 22211 22211 11 46888865
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
... ..++...+.|+++|++.+.
T Consensus 196 ~g~---------------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRG---------------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSC---------------TTHHHHHTTEEEEEEEEEC
T ss_pred CCH---------------HHHHHHHHhhccCCEEEEE
Confidence 432 1356778899999998763
No 396
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=63.01 E-value=61 Score=30.42 Aligned_cols=108 Identities=9% Similarity=-0.015 Sum_probs=58.1
Q ss_pred eEEEEeccc-cHHHHHHHHhCCC--CeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 233 LVVDIGSGN-GLFLLGMARKRKD--LNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 233 ~vLDIGCG~-G~~~~~lA~~~p~--~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
++.=||||. |.......+..|+ .+++++ |.. .++.+.+++.+.+.+ ..|..+++. +..+|.|++.-
T Consensus 4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~---~~~~~~ll~------~~~vD~V~i~t 74 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKA---YGSYEELAK------DPNVEVAYVGT 74 (334)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCE---ESSHHHHHH------CTTCCEEEECC
T ss_pred EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcc---cCCHHHHhc------CCCCCEEEECC
Confidence 455688874 3322222234453 466765 653 345555556666533 467766642 45799999875
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
|+.+ | .+.+..+|+.|=.+++. +.+..-.+.+.+..++.+..
T Consensus 75 p~~~----H----------~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~ 119 (334)
T 3ohs_X 75 QHPQ----H----------KAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 119 (334)
T ss_dssp CGGG----H----------HHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCC
T ss_pred CcHH----H----------HHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCE
Confidence 5442 1 22334456666555553 23334455666666666544
No 397
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=62.39 E-value=11 Score=36.20 Aligned_cols=93 Identities=18% Similarity=0.155 Sum_probs=56.0
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHH-HhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQ-LSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~-~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+|. |..++.+|+.. +++++++|.+..-++.+. +.|.+.+ +-..+...+ .+. .+.+|.++-.-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~-~~~----~~g~D~vid~~ 252 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKM-SEL----ADSLDYVIDTV 252 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHH-HHS----TTTEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHH-HHh----cCCCCEEEECC
Confidence 367888899874 77778888875 568999997654444444 4565433 111222222 211 24689886543
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..+ ..++...+.|+++|++.+.
T Consensus 253 g~~--------------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 253 PVH--------------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CSC--------------CCSHHHHTTEEEEEEEEEC
T ss_pred CCh--------------HHHHHHHHHhccCCEEEEe
Confidence 222 1245567899999998764
No 398
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=61.96 E-value=15 Score=35.12 Aligned_cols=109 Identities=15% Similarity=0.106 Sum_probs=59.0
Q ss_pred eEEEEeccc-cH-HHHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 233 LVVDIGSGN-GL-FLLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 233 ~vLDIGCG~-G~-~~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
+|.=||||. |. +.....+..|+.+++++ |.. .+.+.+++.+..++.. ..|..+++ .+..+|.|++.-|+
T Consensus 4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~-~~~~~~ll------~~~~~D~V~i~tp~ 75 (349)
T 3i23_A 4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNF-TADLNELL------TDPEIELITICTPA 75 (349)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEE-ESCTHHHH------SCTTCCEEEECSCG
T ss_pred EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeE-ECCHHHHh------cCCCCCEEEEeCCc
Confidence 466689987 44 34444555788888876 343 3333334434444543 46766663 35579999887544
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
.. | .+.+.+.|+.|=.+++. +....-.+.+.+..++.+..
T Consensus 76 ~~----h----------~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~ 118 (349)
T 3i23_A 76 HT----H----------YDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVV 118 (349)
T ss_dssp GG----H----------HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HH----H----------HHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCe
Confidence 32 1 22334455555444442 12233345555555555543
No 399
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=60.80 E-value=6.2 Score=37.15 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=55.5
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+..||=+|+|. |..++.+|+.. ++++++++ +..-++.+++.|.+.+ +. |. .. + ...+|.++-...
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v--~~-d~----~~-v---~~g~Dvv~d~~g 208 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGVRHL--YR-EP----SQ-V---TQKYFAIFDAVN 208 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTEEEE--ES-SG----GG-C---CSCEEEEECC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCCCEE--Ec-CH----HH-h---CCCccEEEECCC
Confidence 468899999974 88889999876 56999999 6555555666665432 22 41 21 1 457888763211
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
. ..+....++|+++|++.+.
T Consensus 209 ~---------------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 209 S---------------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp --------------------TTGGGEEEEEEEEEE
T ss_pred c---------------hhHHHHHHHhcCCCEEEEE
Confidence 1 1225567899999998875
No 400
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=60.63 E-value=33 Score=33.20 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=40.7
Q ss_pred eEEEEecc-c-cHHHHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 233 LVVDIGSG-N-GLFLLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 233 ~vLDIGCG-~-G~~~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+|.=|||| . |...+......|+.+++++ |... ++.+.+++.+.+ ...|..+++. +..+|.|++.-|
T Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~----~~~~~~ell~------~~~vD~V~i~tp 73 (387)
T 3moi_A 4 RFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIP----VFATLAEMMQ------HVQMDAVYIASP 73 (387)
T ss_dssp EEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCC----EESSHHHHHH------HSCCSEEEECSC
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCC----eECCHHHHHc------CCCCCEEEEcCC
Confidence 46678999 3 3333444456788888865 6533 333444455543 3567777643 346899988755
Q ss_pred CC
Q 014919 309 NP 310 (416)
Q Consensus 309 dp 310 (416)
+.
T Consensus 74 ~~ 75 (387)
T 3moi_A 74 HQ 75 (387)
T ss_dssp GG
T ss_pred cH
Confidence 43
No 401
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=59.88 E-value=35 Score=32.15 Aligned_cols=109 Identities=10% Similarity=-0.046 Sum_probs=58.3
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+|.=||||. |........+.|+.+++++ |.. .++.+.+++.+... ...|..+++ .+..+|.|++.-|
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll------~~~~~D~V~i~tp 76 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELC------KDETIDIIYIPTY 76 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHH------HCTTCSEEEECCC
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHh------cCCCCCEEEEcCC
Confidence 4577789984 4333333345688888875 653 33444444555432 235666553 2457899988755
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
+.. | .+.+..+|+.|-.+++. +-...-.+.+.+..++.+..
T Consensus 77 ~~~----h----------~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~ 120 (330)
T 3e9m_A 77 NQG----H----------YSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVF 120 (330)
T ss_dssp GGG----H----------HHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCC
T ss_pred CHH----H----------HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 442 1 22333455555445542 22233355566666665543
No 402
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=59.66 E-value=76 Score=30.01 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=56.7
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+|.=||||. |........+.|+.+++++ |... ++.+.+++.+.+. ..|..+++ .+..+|.|++.-|
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l------~~~~~D~V~i~tp 75 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALL------AREDVEMVIITVP 75 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHH------HCSSCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHh------cCCCCCEEEEeCC
Confidence 4677799974 3333333345678887765 7543 3333344555542 45666653 2457899998766
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~ 362 (416)
+++ | .+.+...|+.|-.+++. +-...-.+.+.+..++.+.
T Consensus 76 ~~~----h----------~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~ 118 (354)
T 3db2_A 76 NDK----H----------AEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGV 118 (354)
T ss_dssp TTS----H----------HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCC
T ss_pred hHH----H----------HHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCC
Confidence 543 1 12233455555555543 2223334455555555544
No 403
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=59.46 E-value=21 Score=34.16 Aligned_cols=96 Identities=18% Similarity=0.079 Sum_probs=59.5
Q ss_pred CCCeEEEEe--ccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIG--CG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+| .|.|..+..+|+.. +++++++|.+...++.+++.|.+.+ +..+-.++...........+|.++-..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRG--INYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEE--EeCCchHHHHHHHHHhCCCceEEEECC
Confidence 367899885 35688888888876 5699999976665666666665432 222222221111100134689886542
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.. ..++...+.|+++|++.+.
T Consensus 244 g~---------------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 244 GA---------------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp CG---------------GGHHHHHHTEEEEEEEEEC
T ss_pred CH---------------HHHHHHHHHhccCCEEEEE
Confidence 21 2456778899999998764
No 404
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=59.33 E-value=43 Score=31.56 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=60.0
Q ss_pred CeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
..++=+|| |..+..+++.. .+. ++.+|......+ +++ .++.++++|+.+. +..-...-...|.+.+..++
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~-~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---SGANFVHGDPTRV-SDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---TTCEEEESCTTSH-HHHHHTCSTTEEEEEECCSS
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---CCcEEEEeCCCCH-HHHHhcChhhccEEEEcCCc
Confidence 45666665 78888888753 245 999997654444 433 3578999999764 21111123568888776443
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHH
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 350 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~ 350 (416)
. . ..-......+.+.|...++....++++.
T Consensus 188 d------~-----~n~~~~~~ar~~~~~~~iiar~~~~~~~ 217 (336)
T 1lnq_A 188 D------S-----ETIHCILGIRKIDESVRIIAEAERYENI 217 (336)
T ss_dssp H------H-----HHHHHHHHHHTTCTTSEEEEECSSGGGH
T ss_pred c------H-----HHHHHHHHHHHHCCCCeEEEEECCHHHH
Confidence 2 1 0133445566777877777766555443
No 405
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=58.94 E-value=48 Score=31.34 Aligned_cols=108 Identities=15% Similarity=0.203 Sum_probs=58.5
Q ss_pred eEEEEeccc-cHH-HHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 233 LVVDIGSGN-GLF-LLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 233 ~vLDIGCG~-G~~-~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+|.=||||. |.. +..++++.|+.+++++ |... ++.+.+++.++. +. ...|..+++. +..+|.|++.-|
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~-~~-~~~~~~~ll~------~~~~D~V~i~tp 75 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLN-AT-VYPNDDSLLA------DENVDAVLVTSW 75 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCC-CE-EESSHHHHHH------CTTCCEEEECSC
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC-Ce-eeCCHHHHhc------CCCCCEEEECCC
Confidence 466689986 333 3334435688888865 6543 334444445531 22 3466666632 456899988654
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~ 362 (416)
+.. | .+.+...|+.|-.+++. +....-.+.+.+..++.+.
T Consensus 76 ~~~----h----------~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (344)
T 3mz0_A 76 GPA----H----------ESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGK 118 (344)
T ss_dssp GGG----H----------HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSS
T ss_pred chh----H----------HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCC
Confidence 332 1 22334556666555553 2233345556666666554
No 406
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=58.86 E-value=38 Score=33.03 Aligned_cols=108 Identities=18% Similarity=0.177 Sum_probs=68.8
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+..||.++-+-|.....++ |..+++.+.-+.-+.+..+.+|++- .+ .+ .. + ..+..+|.|.+..|
T Consensus 46 ~~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~-~~--~~--~~-~----~~~~~~d~v~~~~P-- 110 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRCLTASGLQA-RL--AL--PW-E----AAAGAYDLVVLALP-- 110 (381)
T ss_dssp SSEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHHHHHTTCCC-EE--CC--GG-G----SCTTCEEEEEEECC--
T ss_pred CCcEEEecCCCCccccccC---CCCceEEEeCcHHHHHHHHHcCCCc-cc--cC--Cc-c----CCcCCCCEEEEECC--
Confidence 3579999999998776664 3346666653333333355677763 21 11 11 1 13678999998843
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHH
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFL 358 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~ 358 (416)
|.+.. . .....|..+.+.|+|||.+++.-++..-++.....+.
T Consensus 111 --k~k~~--~-~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~ 153 (381)
T 3dmg_A 111 --AGRGT--A-YVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEAR 153 (381)
T ss_dssp --GGGCH--H-HHHHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHH
T ss_pred --cchhH--H-HHHHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHH
Confidence 32210 1 1246788899999999999998877777776666665
No 407
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=58.43 E-value=31 Score=33.63 Aligned_cols=71 Identities=18% Similarity=0.109 Sum_probs=41.3
Q ss_pred CeEEEEeccc-cH-HHHHHHHh---C----CCCeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCce
Q 014919 232 PLVVDIGSGN-GL-FLLGMARK---R----KDLNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~---~----p~~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
-+|-=||||. |. ++..+++. . ++.+++|| |.. +++.+.+++.+..+ ...|..+++. +..+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~------~~~v 97 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVN------DPQV 97 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHH------CTTC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhc------CCCC
Confidence 4677899985 32 22233321 1 24577776 654 34445556666553 3467777643 5579
Q ss_pred eEEEEECCCCC
Q 014919 301 ILVSIQCPNPD 311 (416)
Q Consensus 301 D~v~~~fpdpw 311 (416)
|.|++.-|+.+
T Consensus 98 D~V~I~tp~~~ 108 (412)
T 4gqa_A 98 DVVDITSPNHL 108 (412)
T ss_dssp CEEEECSCGGG
T ss_pred CEEEECCCcHH
Confidence 99998765543
No 408
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=58.15 E-value=20 Score=34.45 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=54.7
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHH-HhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQ-LSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~-~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+|. |..++.+|+.. ++++++++.+...++.+. +.|.+.+ +-..+...+ .+. .+.+|.++-..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~-~~~----~~~~D~vid~~ 259 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQM-QAA----AGTLDGIIDTV 259 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHH-HHT----TTCEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHH-HHh----hCCCCEEEECC
Confidence 357788899865 77778888876 568999996544334333 4454422 111221122 221 24689887553
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..+ ..++...+.|+++|++...
T Consensus 260 g~~--------------~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 260 SAV--------------HPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SSC--------------CCSHHHHHHEEEEEEEEEC
T ss_pred CcH--------------HHHHHHHHHHhcCCEEEEE
Confidence 322 1234566789999988764
No 409
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=58.12 E-value=1e+02 Score=31.07 Aligned_cols=131 Identities=12% Similarity=0.024 Sum_probs=76.1
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhC--CCcEEEEEcChhhhhhhh------------hccC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSG--ITNGYFIATNATSTFRSI------------VASY 296 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~--l~nv~f~~~Da~~l~~~~------------~~~~ 296 (416)
.-+++|+=||.|.+...+.+.. -..+.++|+...|.+..+.+- .++..++++|+.++.... +...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~ 166 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQH 166 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhc
Confidence 4689999999999999887652 124789999887777655432 235567789998873100 0001
Q ss_pred CCceeEEEEECCCCCCC-Ccch--------------hhhhhhHHHHHHHHhhccCCcEEEEE-------eCcHHHHHHHH
Q 014919 297 PGKLILVSIQCPNPDFN-RPEH--------------RWRMVQRSLVEAVSDLLVHDGKVFLQ-------SDIEEVMLRMK 354 (416)
Q Consensus 297 ~~s~D~v~~~fpdpw~k-~~h~--------------krRl~~~~~l~~i~r~LkpgG~l~l~-------tD~~~~~~~~~ 354 (416)
...+|+++..+|=.-+. .... .|.-+...+++ +.+.++|- .|++. .+....+..++
T Consensus 167 ~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~r-iI~~~rPk-~fvlENV~gl~s~~~g~~f~~i~ 244 (482)
T 3me5_A 167 IPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVR-IIDARRPA-MFVLENVKNLKSHDKGKTFRIIM 244 (482)
T ss_dssp SCCCSEEEEECCCCCC------------------CTTTTSHHHHHHH-HHHHHCCS-EEEEEEETTTTTGGGGHHHHHHH
T ss_pred CCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHH-HHHHcCCc-EEEEeCcHHHhcccCCcHHHHHH
Confidence 13589998887532222 1111 11111223333 33345774 33442 23345778888
Q ss_pred HHHHhCCCCc
Q 014919 355 QQFLEYGKGK 364 (416)
Q Consensus 355 ~~~~~~~~~~ 364 (416)
+.|++.|+.+
T Consensus 245 ~~L~~lGY~v 254 (482)
T 3me5_A 245 QTLDELGYDV 254 (482)
T ss_dssp HHHHHTTEEE
T ss_pred HHHhcCCcEE
Confidence 8999887643
No 410
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=57.98 E-value=6.7 Score=32.90 Aligned_cols=42 Identities=17% Similarity=0.153 Sum_probs=30.8
Q ss_pred cCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEE
Q 014919 295 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 342 (416)
Q Consensus 295 ~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l 342 (416)
++++.||.|++.-|..- ..+.+.+.++..+++.|||||.|.-
T Consensus 55 Lp~stYD~V~~lt~~~~------~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQ------TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSS------CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCcc------chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 36789999987643221 1123446999999999999999996
No 411
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=57.82 E-value=12 Score=35.19 Aligned_cols=91 Identities=15% Similarity=0.140 Sum_probs=54.9
Q ss_pred eEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcCh-hhhhhhhhccCCCceeEEEEECCC
Q 014919 233 LVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNA-TSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 233 ~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da-~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.||=+|+ |.|..++.+|+.. ++++++++.+..-++.+++.|.+.+ +-..+. .+.... + ..+.+|.++-....
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~-~--~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRP-L--DKQRWAAAVDPVGG 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEE-EECC----------C--CSCCEEEEEECSTT
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHH-h--cCCcccEEEECCcH
Confidence 6999997 6788899999876 5689999975444445555665432 111111 111111 1 23468887644221
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
..++...+.|+++|++.+.
T Consensus 227 ---------------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 227 ---------------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ---------------TTHHHHHHTEEEEEEEEEC
T ss_pred ---------------HHHHHHHHhhccCCEEEEE
Confidence 2356778899999998874
No 412
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=56.89 E-value=79 Score=30.00 Aligned_cols=108 Identities=12% Similarity=-0.020 Sum_probs=61.2
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+|.=||||. |. ..+....+.|+.+++++ |.. .++.+.+++.+.+ .. .|..+++ .+..+|.|++.-
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~---~~-~~~~~ll------~~~~~D~V~i~t 97 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGE---PV-EGYPALL------ERDDVDAVYVPL 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSE---EE-ESHHHHH------TCTTCSEEEECC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCC---Cc-CCHHHHh------cCCCCCEEEECC
Confidence 4688899984 43 23333345688888866 654 3344444455543 32 6766663 355799999865
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
|+.. | .+.+..+|+.|-.+++. +....-.+.+.+..++.+..
T Consensus 98 p~~~----h----------~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~ 142 (350)
T 3rc1_A 98 PAVL----H----------AEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLL 142 (350)
T ss_dssp CGGG----H----------HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred CcHH----H----------HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 4432 1 23344556666555553 22334456666666666654
No 413
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=55.33 E-value=1e+02 Score=28.98 Aligned_cols=108 Identities=14% Similarity=0.050 Sum_probs=59.3
Q ss_pred eEEEEeccc-cHHHHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 233 LVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 233 ~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
+|.=||||. |........+.|+.+++++ |... ++.+.++..+.. -...|..+++. +..+|.|++.-|+
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~---~~~~~~~~ll~------~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVE---KAYKDPHELIE------DPNVDAVLVCSST 74 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCS---EEESSHHHHHH------CTTCCEEEECSCG
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCC---ceeCCHHHHhc------CCCCCEEEEcCCC
Confidence 466689974 3333333334688888875 7643 333334445543 23467666632 4578999887554
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
.+ | .+.+..+|+.|-.+++. +....-.+.+.+..++.+..
T Consensus 75 ~~----h----------~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~ 117 (344)
T 3ezy_A 75 NT----H----------SELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVI 117 (344)
T ss_dssp GG----H----------HHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCC
T ss_pred cc----h----------HHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCc
Confidence 32 1 22334456666556554 23334455666666666543
No 414
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=53.46 E-value=92 Score=30.16 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=44.4
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEE-ch-HHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGL-EL-VTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGv-D~-~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
..+|.=||||.|.+-+....+.| +.+++|| |. .+++.+.+++.|.+ ...|..+++ ..+|.+++--
T Consensus 7 ~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~----~~~~~~~l~--------~~~D~v~i~~ 74 (372)
T 4gmf_A 7 KQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIP----LYTSPEQIT--------GMPDIACIVV 74 (372)
T ss_dssp CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCC----EESSGGGCC--------SCCSEEEECC
T ss_pred CCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCC----EECCHHHHh--------cCCCEEEEEC
Confidence 45788899998876444334455 4788886 54 45666667777764 246776662 2478888876
Q ss_pred CCCCC
Q 014919 308 PNPDF 312 (416)
Q Consensus 308 pdpw~ 312 (416)
|++.+
T Consensus 75 p~~~h 79 (372)
T 4gmf_A 75 RSTVA 79 (372)
T ss_dssp C--CT
T ss_pred CCccc
Confidence 66644
No 415
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=52.75 E-value=56 Score=30.90 Aligned_cols=106 Identities=8% Similarity=0.035 Sum_probs=60.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCeEEEEch---HHHHHHHHHHhC---CCcEEEEEcChhhhhhhhhc---cCCCce
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEL---VTHCRDSLQLSG---ITNGYFIATNATSTFRSIVA---SYPGKL 300 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~---~~~a~~~a~~~~---l~nv~f~~~Da~~l~~~~~~---~~~~s~ 300 (416)
...||+||||-=.....+. .| ++.|+=||. +....+...+.+ -.+.+++.+|+.+-+.+.+. +....-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCC
Confidence 4679999999877755544 34 479999993 333333333322 35799999998752111111 011111
Q ss_pred eEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 301 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 301 D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
-.+.+-..-.+..... ...+++.+...+.||+.+.+..
T Consensus 181 t~~i~Egvl~Yl~~~~------~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATA------QDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp EEEEECSCGGGSCHHH------HHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEEEEechHhhCCHHH------HHHHHHHHHHhCCCCeEEEEEe
Confidence 2222222222222111 2478899999999999999864
No 416
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=51.95 E-value=42 Score=27.62 Aligned_cols=105 Identities=11% Similarity=0.111 Sum_probs=55.2
Q ss_pred CCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
+..|+=+|||. |..+...+... +.+++++|......+.+.. ..++.++.+|..+. +..-...-..+|.|+...++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~--~~g~~~~~~d~~~~-~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS--EFSGFTVVGDAAEF-ETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT--TCCSEEEESCTTSH-HHHHTTTGGGCSEEEECSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh--cCCCcEEEecCCCH-HHHHHcCcccCCEEEEEeCC
Confidence 57788888854 33333333333 5689999965432222210 12345667776442 11111012358888876543
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHH
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 350 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~ 350 (416)
+- . ...+..+.+.+.+...++..+....+.
T Consensus 95 ~~----------~-~~~~~~~~~~~~~~~~iv~~~~~~~~~ 124 (155)
T 2g1u_A 95 DS----------T-NFFISMNARYMFNVENVIARVYDPEKI 124 (155)
T ss_dssp HH----------H-HHHHHHHHHHTSCCSEEEEECSSGGGH
T ss_pred cH----------H-HHHHHHHHHHHCCCCeEEEEECCHHHH
Confidence 21 1 133444556666777777777666543
No 417
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=51.48 E-value=41 Score=32.00 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=40.4
Q ss_pred CeEEEEeccc-cHH-HHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~-~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
-+|.=||||. |.. ........|+.+++++ |......+ ....++.+ ..|..+++. +..+|.|++.-|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~----~~~~~~~~-~~~~~~ll~------~~~vD~V~i~tp 76 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH----ADWPAIPV-VSDPQMLFN------DPSIDLIVIPTP 76 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH----TTCSSCCE-ESCHHHHHH------CSSCCEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH----hhCCCCce-ECCHHHHhc------CCCCCEEEEeCC
Confidence 4678899987 442 4444556788888865 54332111 12223332 467666642 457999998755
Q ss_pred CCC
Q 014919 309 NPD 311 (416)
Q Consensus 309 dpw 311 (416)
+.+
T Consensus 77 ~~~ 79 (352)
T 3kux_A 77 NDT 79 (352)
T ss_dssp TTT
T ss_pred hHH
Confidence 543
No 418
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=50.77 E-value=13 Score=35.58 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=29.1
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCeEEEEchHH
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLELVT 264 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~ 264 (416)
.+.+|||-=||+|..+.+..+. +.+++|+|+..
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~ 274 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAP 274 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHH--TCEEEEEESST
T ss_pred CCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCc
Confidence 5789999999999999888777 67999999866
No 419
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=50.11 E-value=16 Score=34.90 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=53.6
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+|+ |.|..++.+|+......+++++... -.+.++ .|.+.+.-...|..+.+.+. ..+.+|.++-..
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~-~~~~~~-~ga~~~~~~~~~~~~~~~~~---~~~g~Dvv~d~~ 216 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTF-KHEAIK-DSVTHLFDRNADYVQEVKRI---SAEGVDIVLDCL 216 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGG-GHHHHG-GGSSEEEETTSCHHHHHHHH---CTTCEEEEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHH-HHHHHH-cCCcEEEcCCccHHHHHHHh---cCCCceEEEECC
Confidence 3688999998 4588888899877678999988422 223333 55543211111221111211 245799887543
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.. ..++...+.|+++|++.+.
T Consensus 217 g~---------------~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 217 CG---------------DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp C----------------------CTTEEEEEEEEEE
T ss_pred Cc---------------hhHHHHHHHhhcCCEEEEE
Confidence 22 1236678899999998874
No 420
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=50.00 E-value=29 Score=32.69 Aligned_cols=109 Identities=5% Similarity=-0.050 Sum_probs=55.8
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.++.=||||. |..........|+.+++++ |... ++.+.+++.+..+ ...|..+++ .+..+|.|++.-|
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll------~~~~~D~V~i~tp 76 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDML------ADESIDVIYVATI 76 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHH------TCTTCCEEEECSC
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHh------cCCCCCEEEECCC
Confidence 4577799984 3322222234577788876 5432 2222223333322 245666653 3457899988755
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
+.. | .+.+...|+.|-.+++. +....-.+.+.+..++.+..
T Consensus 77 ~~~----h----------~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 77 NQD----H----------YKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLF 120 (329)
T ss_dssp GGG----H----------HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred cHH----H----------HHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCE
Confidence 432 1 22334455666555553 22333455566666666543
No 421
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=49.93 E-value=26 Score=32.79 Aligned_cols=90 Identities=13% Similarity=0.001 Sum_probs=57.5
Q ss_pred eEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 233 LVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 233 ~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
.||=+|+ |.|..++.+|+.. ++++++++.+..-++.+++.|.+.+- -..+.... .. ...+.+|.++-. .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~-~~---~~~~~~d~v~d~-~-- 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRIL-SRDEFAES-RP---LEKQLWAGAIDT-V-- 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEE-EGGGSSCC-CS---SCCCCEEEEEES-S--
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEE-ecCCHHHH-Hh---hcCCCccEEEEC-C--
Confidence 3898997 6789999999986 56999999765545555666755321 11111111 11 123568877532 1
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-...++...+.|+|+|++.+.
T Consensus 220 ------------g~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 220 ------------GDKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp ------------CHHHHHHHHHTEEEEEEEEEC
T ss_pred ------------CcHHHHHHHHHHhcCCEEEEE
Confidence 014678889999999998874
No 422
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=49.77 E-value=28 Score=33.30 Aligned_cols=48 Identities=13% Similarity=0.166 Sum_probs=34.7
Q ss_pred CCCeEEEEecc-ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCc
Q 014919 230 AQPLVVDIGSG-NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITN 277 (416)
Q Consensus 230 ~~~~vLDIGCG-~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~n 277 (416)
.+..||=+|+| .|.+++.+|+..++++++++|.+..-++.+++.|.+.
T Consensus 186 ~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~ 234 (359)
T 1h2b_A 186 PGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH 234 (359)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCE
Confidence 36788888875 3566777888764679999998766566666677553
No 423
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=49.70 E-value=36 Score=32.38 Aligned_cols=69 Identities=14% Similarity=0.046 Sum_probs=38.7
Q ss_pred eEEEEeccc-cHH-HHHHHHhCC-------CCeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 233 LVVDIGSGN-GLF-LLGMARKRK-------DLNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 233 ~vLDIGCG~-G~~-~~~lA~~~p-------~~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
+|-=||||. |.. +..+. ..| ..++++| |.. +++.+.+++.+... ...|..+++ .+..+|
T Consensus 8 rvgiIG~G~ig~~h~~~~~-~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll------~~~~iD 77 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWR-SAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLL------ERDDVQ 77 (390)
T ss_dssp EEEEECHHHHHHHHHHHHH-HHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHT------TCTTCS
T ss_pred cEEEEcCCHHHHHHHHHHH-hCccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHh------cCCCCC
Confidence 455689975 322 22222 223 2356665 654 34444455666653 356777764 356799
Q ss_pred EEEEECCCCC
Q 014919 302 LVSIQCPNPD 311 (416)
Q Consensus 302 ~v~~~fpdpw 311 (416)
.|++.-|+.+
T Consensus 78 aV~I~tP~~~ 87 (390)
T 4h3v_A 78 LVDVCTPGDS 87 (390)
T ss_dssp EEEECSCGGG
T ss_pred EEEEeCChHH
Confidence 9998766554
No 424
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=49.61 E-value=1.4e+02 Score=27.82 Aligned_cols=110 Identities=15% Similarity=0.019 Sum_probs=59.0
Q ss_pred CCeEEEEeccc-cHHHHHHHH-hCCCCeEEEE-chHHHHHHH-HHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGN-GLFLLGMAR-KRKDLNFLGL-ELVTHCRDS-LQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~-~~p~~~~iGv-D~~~~a~~~-a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
..+|.=||||. |........ ..|+.+++++ |......+. +++.+.. . ...|..+++ .+..+|.|++.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~--~-~~~~~~~~l------~~~~~D~V~i~ 78 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVE--T-TYTNYKDMI------DTENIDAIFIV 78 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCS--E-EESCHHHHH------TTSCCSEEEEC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCC--c-ccCCHHHHh------cCCCCCEEEEe
Confidence 45788899985 444333333 5678887764 765433333 3334442 2 235655552 24468999886
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhC-CCC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEY-GKG 363 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~-~~~ 363 (416)
-|+.. | .+.+..+|+.|-.+++. +-...-.+.+.+..++. +..
T Consensus 79 tp~~~----h----------~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 79 APTPF----H----------PEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp SCGGG----H----------HHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred CChHh----H----------HHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 44332 1 23344566776555553 11233345566666666 543
No 425
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=49.58 E-value=3.4 Score=50.56 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=39.5
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-----CCeEEEEchH----HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-----DLNFLGLELV----THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-----~~~~iGvD~~----~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
..+|||||.|+|..+..+.+... ...|+-.|++ ..|.++.+.. ++..-.-|.... . ++...++|
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~--~--~~~~~~yd 1313 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANP--A--PGSLGKAD 1313 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCC--C--C-----CC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---cccccccccccc--c--cCCCCcee
Confidence 35899999999987665544322 2356777764 2333332221 122111121110 0 11245799
Q ss_pred EEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 302 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 302 ~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+|... +..+..+. + ...|+.+++.|||||.+++.
T Consensus 1314 lvia~--~vl~~t~~----~--~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1314 LLVCN--CALATLGD----P--AVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp EEEEE--CC--------------------------CCEEEEE
T ss_pred EEEEc--cccccccc----H--HHHHHHHHHhcCCCcEEEEE
Confidence 99876 22221111 1 26788999999999998875
No 426
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=49.41 E-value=38 Score=33.60 Aligned_cols=95 Identities=14% Similarity=-0.004 Sum_probs=60.1
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEE-EcCh------------------hhh
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFI-ATNA------------------TST 288 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~-~~Da------------------~~l 288 (416)
.+..||=+|+ |.|..++.+|+.. ++++++++.+..-++.+++.|.+.+--. ..|. ..+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence 3678999997 5688888899876 6789998876655566666676432110 0110 111
Q ss_pred hhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 289 FRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 289 ~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.+.. ....+|.++-.-. ...++...+.|+++|++.+.
T Consensus 307 -~~~t--~g~g~Dvvid~~G---------------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 307 -RELT--GGEDIDIVFEHPG---------------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp -HHHH--TSCCEEEEEECSC---------------HHHHHHHHHHEEEEEEEEES
T ss_pred -HHHh--CCCCCcEEEEcCC---------------chhHHHHHHHhhCCcEEEEE
Confidence 2222 2347898864311 15677888999999998873
No 427
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=48.04 E-value=98 Score=30.19 Aligned_cols=78 Identities=14% Similarity=0.108 Sum_probs=43.4
Q ss_pred CCeEEEEeccc----cHHHHHHHHhCCCCeEEE-E-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 231 QPLVVDIGSGN----GLFLLGMARKRKDLNFLG-L-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 231 ~~~vLDIGCG~----G~~~~~lA~~~p~~~~iG-v-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
.-+|.=||||. |..-.......++.++++ + |.. +++.+.+++.+.+..+ ...|..+++..--. .+..+|.|
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~-~~~~~~~ll~~~~~-~~~~vD~V 114 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSR-VYSDFKEMAIREAK-LKNGIEAV 114 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGG-BCSCHHHHHHHHHH-CTTCCSEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCccc-ccCCHHHHHhcccc-cCCCCcEE
Confidence 34788899996 433333344567778875 5 764 4455555566765211 23566666431000 01468999
Q ss_pred EEECCCC
Q 014919 304 SIQCPNP 310 (416)
Q Consensus 304 ~~~fpdp 310 (416)
++.-|+.
T Consensus 115 ~I~tp~~ 121 (417)
T 3v5n_A 115 AIVTPNH 121 (417)
T ss_dssp EECSCTT
T ss_pred EECCCcH
Confidence 9875544
No 428
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=47.98 E-value=21 Score=34.31 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=36.3
Q ss_pred CCeEEEEeccccHHHHHHHHhCCC----CeEEEEchHHHHHHHHHHhCCCcEEEEEc
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKD----LNFLGLELVTHCRDSLQLSGITNGYFIAT 283 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~----~~~iGvD~~~~a~~~a~~~~l~nv~f~~~ 283 (416)
+..||=+|.+.|.++..|++.+|+ .+|+.+|-...+. ...+++|+.++..
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~---~Le~~~ni~li~~ 129 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDP---ILNGLRDVTLVTR 129 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCG---GGTTCTTEEEEEC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhh---hhcCCCcEEeehh
Confidence 569999999999999999998775 7999999422111 1234556766654
No 429
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=47.64 E-value=28 Score=32.69 Aligned_cols=121 Identities=10% Similarity=0.001 Sum_probs=73.2
Q ss_pred eEEEEeccccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC-CCC
Q 014919 233 LVVDIGSGNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP-NPD 311 (416)
Q Consensus 233 ~vLDIGCG~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp-dpw 311 (416)
++||+=||.|.+...+-+.. -.-+.++|+...|.+..+.+-. -.++.+|+.++..+.+ ..+|+++..+| .++
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~--~~~~~~DI~~i~~~~~----~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHS--AKLIKGDISKISSDEF----PKCDGIIGGPPSQSW 74 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCC--SEEEESCGGGCCGGGS----CCCSEEECCCCGGGT
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCC--CCcccCChhhCCHhhC----CcccEEEecCCCCCc
Confidence 58999999999988887662 2245689987766665544432 2567899988733323 35898876654 222
Q ss_pred CCCc-----chhh-hhhhHHHHHHHHhhccCCcEEEEE-------eCcHHHHHHHHHHHHhCCCC
Q 014919 312 FNRP-----EHRW-RMVQRSLVEAVSDLLVHDGKVFLQ-------SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 312 ~k~~-----h~kr-Rl~~~~~l~~i~r~LkpgG~l~l~-------tD~~~~~~~~~~~~~~~~~~ 363 (416)
.... +..| .++ ..+++ +.+.++|. .+++. .+....++.+++.|++.|+.
T Consensus 75 S~ag~~~g~~d~R~~L~-~~~~r-~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~ 136 (331)
T 3ubt_Y 75 SEGGSLRGIDDPRGKLF-YEYIR-ILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYD 136 (331)
T ss_dssp EETTEECCTTCGGGHHH-HHHHH-HHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEE
T ss_pred CCCCCccCCCCchhHHH-HHHHH-HHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcE
Confidence 1111 1111 222 24443 44556885 34443 23446788888889887764
No 430
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=45.47 E-value=1.4e+02 Score=28.02 Aligned_cols=70 Identities=9% Similarity=0.145 Sum_probs=40.9
Q ss_pred CCeEEEEeccc-cHH-HHHHHHhCCCCeEEEE-chHHH-HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGN-GLF-LLGMARKRKDLNFLGL-ELVTH-CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~-~~~lA~~~p~~~~iGv-D~~~~-a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
..+|.=||||. |.. +..+++..|+.+++++ |.... +.+.+++.+. -...|..+++. +..+|.|++.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~----~~~~~~~~ll~------~~~~D~V~i~ 82 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA----RGHASLTDMLA------QTDADIVILT 82 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC----EEESCHHHHHH------HCCCSEEEEC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC----ceeCCHHHHhc------CCCCCEEEEC
Confidence 45788899993 443 3334433378887754 76433 3333444553 23467766642 3468999886
Q ss_pred CCCC
Q 014919 307 CPNP 310 (416)
Q Consensus 307 fpdp 310 (416)
-|+.
T Consensus 83 tp~~ 86 (354)
T 3q2i_A 83 TPSG 86 (354)
T ss_dssp SCGG
T ss_pred CCcH
Confidence 5543
No 431
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=44.16 E-value=12 Score=35.40 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=37.2
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCC----CeEEEEchHHHHHHHHHHhCCCcEEEEEc
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKD----LNFLGLELVTHCRDSLQLSGITNGYFIAT 283 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~----~~~iGvD~~~~a~~~a~~~~l~nv~f~~~ 283 (416)
++..|+=+|||.|.++..|++.+|+ .+++.+|-...+. ...+..||.++..
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~---~l~~~~NV~li~~ 114 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDP---ILNGLRDVTLVTR 114 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCG---GGTTCTTEEEEEC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchh---hhcCCCcEEEEec
Confidence 3579999999999999999998775 6999999522110 1235577776655
No 432
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=43.89 E-value=98 Score=28.53 Aligned_cols=106 Identities=13% Similarity=0.055 Sum_probs=60.6
Q ss_pred CeEEEEeccc-cHH-HHHHHHhCCCCeEEE-EchHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLG-LELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~-G~~-~~~lA~~~p~~~~iG-vD~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.++.=||||. |.. ......+.|+.++++ +|... ++.+.+++.+.+. ..|..++ + . .+|.|++.-
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~l----l---~-~~D~V~i~t 74 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESL----A---K-KCDCIFLHS 74 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHH----H---T-TCSEEEECC
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHH----H---h-cCCEEEEeC
Confidence 5677899985 442 333344568888886 57543 3444444556542 3555554 2 3 689998864
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
|+.. | .+.+..+|+.|-.+++. +....-.+.+.+..++.+..
T Consensus 75 p~~~----h----------~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 75 STET----H----------YEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp CGGG----H----------HHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CcHh----H----------HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 4332 1 23344566666666653 23344566677777776654
No 433
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=43.68 E-value=54 Score=31.36 Aligned_cols=96 Identities=10% Similarity=0.020 Sum_probs=57.0
Q ss_pred CCCeEEEEe-c-cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIG-S-GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIG-C-G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+..||=+| | |.|..++.+|+.. ++++++++ +..-++.+++.|.+.+ +..+-.++..... ....+|.++-.-
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v--~~~~~~~~~~~~~--~~~g~D~vid~~ 256 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKLGADDV--IDYKSGSVEEQLK--SLKPFDFILDNV 256 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEE--EETTSSCHHHHHH--TSCCBSEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHcCCCEE--EECCchHHHHHHh--hcCCCCEEEECC
Confidence 367899999 3 4688888899876 57899988 3333444555665432 2222122211111 124689886542
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
..+ ...++...+.|+++|++.+..
T Consensus 257 g~~-------------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 257 GGS-------------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CTT-------------HHHHGGGGBCSSSCCEEEESC
T ss_pred CCh-------------hhhhHHHHHhhcCCcEEEEeC
Confidence 221 023466678899999988753
No 434
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=43.64 E-value=1.4e+02 Score=28.21 Aligned_cols=110 Identities=15% Similarity=0.127 Sum_probs=60.9
Q ss_pred CCeEEEEeccc-cHH-HHHHHHhCCCCeEEE-EchH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGN-GLF-LLGMARKRKDLNFLG-LELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~-~~~lA~~~p~~~~iG-vD~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
..+|.=||||. |.. +..+++..|+.++++ +|.. .++.+.+++.++. +. ...|..+++. +..+|.|++.
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~-~~-~~~~~~~ll~------~~~~D~V~i~ 94 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIE-AK-DYNDYHDLIN------DKDVEVVIIT 94 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCC-CE-EESSHHHHHH------CTTCCEEEEC
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCC-Ce-eeCCHHHHhc------CCCCCEEEEc
Confidence 34688899986 433 333443668888886 4653 3333444455531 22 3466666642 4568999886
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~ 362 (416)
-|+.+ | .+.+..+|+.|-.+++. +....-.+.+.+..++.+.
T Consensus 95 tp~~~----h----------~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 139 (357)
T 3ec7_A 95 ASNEA----H----------ADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGK 139 (357)
T ss_dssp SCGGG----H----------HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTS
T ss_pred CCcHH----H----------HHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCC
Confidence 55432 1 23344556666555553 2233345556666666554
No 435
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.18 E-value=1.2e+02 Score=23.68 Aligned_cols=112 Identities=10% Similarity=0.066 Sum_probs=59.2
Q ss_pred CCeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
...|+=+|| |..+..+|+.. .+.+++.+|......+.+.+. .++.++.+|..+. .......-...|.|++..|
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~--~~~~~~~~d~~~~-~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE--IDALVINGDCTKI-KTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--CSSEEEESCTTSH-HHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh--cCcEEEEcCCCCH-HHHHHcCcccCCEEEEeeC
Confidence 356777777 55555555431 357899999755444433322 1355677776543 1111111246898887644
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHHHHHHHHHHhCCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~~~~~~~~~~~~~~ 363 (416)
++. . ...+..+.+.+.++ .++..+....+. +.+++.+..
T Consensus 79 ~~~----------~-~~~~~~~~~~~~~~-~ii~~~~~~~~~----~~l~~~g~~ 117 (140)
T 1lss_A 79 KEE----------V-NLMSSLLAKSYGIN-KTIARISEIEYK----DVFERLGVD 117 (140)
T ss_dssp CHH----------H-HHHHHHHHHHTTCC-CEEEECSSTTHH----HHHHHTTCS
T ss_pred Cch----------H-HHHHHHHHHHcCCC-EEEEEecCHhHH----HHHHHcCCC
Confidence 321 1 13455566677875 555555554443 345555643
No 436
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=42.72 E-value=1.2e+02 Score=28.51 Aligned_cols=107 Identities=11% Similarity=0.118 Sum_probs=56.4
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEEE-EchHHH-HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLG-LELVTH-CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~iG-vD~~~~-a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+|.=||||. |........+.|+.++++ +|.... +.+.+++.+ +. ...|..+++ .+..+|.|++.-|
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g---~~-~~~~~~~~l------~~~~~D~V~i~tp 74 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANG---AE-AVASPDEVF------ARDDIDGIVIGSP 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT---CE-EESSHHHHT------TCSCCCEEEECSC
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC---Cc-eeCCHHHHh------cCCCCCEEEEeCC
Confidence 3577799976 444333344578888886 465433 333333334 33 245666653 3457899988755
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~ 362 (416)
+.+ | .+.+..+|+.|-.+++. +....-.+.+.+..++.+.
T Consensus 75 ~~~----h----------~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 117 (344)
T 3euw_A 75 TST----H----------VDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGAS 117 (344)
T ss_dssp GGG----H----------HHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGG
T ss_pred chh----h----------HHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 442 1 22334455555555542 2222334455555555543
No 437
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.04 E-value=1.1e+02 Score=23.02 Aligned_cols=67 Identities=10% Similarity=-0.013 Sum_probs=39.4
Q ss_pred CCeEEEEeccccHHHHHHHH---hCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh--hhhhhccCCCceeEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMAR---KRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST--FRSIVASYPGKLILVSI 305 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~---~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l--~~~~~~~~~~s~D~v~~ 305 (416)
...|+=+|+ |..+..+++ .....+++++|......+.+. ..++.++..|..+. +.+.+ ..+|.|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~----~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKAL----GGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHT----TTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHH----cCCCEEEE
Confidence 356888898 555554443 333378999997554444333 23467777777653 12222 35788876
Q ss_pred E
Q 014919 306 Q 306 (416)
Q Consensus 306 ~ 306 (416)
.
T Consensus 76 ~ 76 (118)
T 3ic5_A 76 A 76 (118)
T ss_dssp C
T ss_pred C
Confidence 5
No 438
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=41.91 E-value=57 Score=32.07 Aligned_cols=94 Identities=11% Similarity=-0.006 Sum_probs=58.6
Q ss_pred CCCeEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEE-EEcC-------------------hhh
Q 014919 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYF-IATN-------------------ATS 287 (416)
Q Consensus 230 ~~~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f-~~~D-------------------a~~ 287 (416)
.+..||=+|+ |.|..++.+|+.. ++++++++.+..-++.+++.|.+.+-- ...| ...
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 4688999997 5588888888875 578999987665566666666553211 0011 011
Q ss_pred hhhhhhccCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 288 TFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 288 l~~~~~~~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+ .+.. ...+|.++-.-. ...++...+.|+++|++.+.
T Consensus 299 v-~~~~---g~g~Dvvid~~G---------------~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 299 V-VEKA---GREPDIVFEHTG---------------RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp H-HHHH---SSCCSEEEECSC---------------HHHHHHHHHHSCTTCEEEES
T ss_pred H-HHHh---CCCceEEEECCC---------------chHHHHHHHHHhcCCEEEEE
Confidence 1 1111 345888764311 14567788899999998874
No 439
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=41.81 E-value=15 Score=34.52 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=55.4
Q ss_pred eEEEEec--cccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEc-Ch-hhhhhhhhccCCCceeEEEEECC
Q 014919 233 LVVDIGS--GNGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIAT-NA-TSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 233 ~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~-Da-~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
.||=+|+ |.|..++.+|+.. ++++++++.+..-++.+++.|.+.+ +.. +. .+.+.. + ..+.+|.++-...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~~~~~-~--~~~~~d~vid~~g 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEV--ISREDVYDGTLKA-L--SKQQWQGAVDPVG 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEE--EEHHHHCSSCCCS-S--CCCCEEEEEESCC
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEE--EECCCchHHHHHH-h--hcCCccEEEECCc
Confidence 7999997 6788888888876 4689999875433444555665432 211 11 010010 1 2346888764311
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
...++...+.|+++|++.+.
T Consensus 227 ---------------~~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 227 ---------------GKQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp ---------------THHHHHHHTTEEEEEEEEEC
T ss_pred ---------------HHHHHHHHHhhcCCCEEEEE
Confidence 13567888999999998764
No 440
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=41.73 E-value=76 Score=30.69 Aligned_cols=99 Identities=16% Similarity=0.049 Sum_probs=53.2
Q ss_pred CCCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHH-hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQL-SGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 230 ~~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~-~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+.+|+=+|+|. |..+..+++.. +.+++++|......+.+++ .+.. +.....+..++ .+.+ ...|.|+..-
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l-~~~l----~~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYEL-EGAV----KRADLVIGAV 239 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHH-HHHH----HHCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHH-HHHH----cCCCEEEECC
Confidence 357899999954 33344445554 4589999976555444443 3332 22222233332 2222 2578887643
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+.|....+ .++ .++..+.|||||.+...
T Consensus 240 ~~p~~~t~----~li----~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 240 LVPGAKAP----KLV----SNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CCTTSCCC----CCB----CHHHHTTSCTTCEEEEG
T ss_pred CcCCCCCc----cee----cHHHHhcCCCCcEEEEE
Confidence 33321111 122 23455678999987653
No 441
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=39.21 E-value=67 Score=35.66 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=76.6
Q ss_pred CCeEEEEeccccHHHHHHHHhCCCC--eEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhh------------hhccC
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRKDL--NFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRS------------IVASY 296 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p~~--~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~------------~~~~~ 296 (416)
..+++|+=||.|.+...|.+. +. .+.++|+...|.+..+.+ .++..++.+|+.++... .+| .
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N-~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp-~ 615 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLN-NPGSTVFTEDCNILLKLVMAGETTNSRGQRLP-Q 615 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHH-CTTSEEECSCHHHHHHHHHHTCSBCTTCCBCC-C
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHh-CCCCccccccHHHHhhhccchhhhhhhhhhcc-c
Confidence 458999999999999998776 43 577999988887765443 45677888888765311 011 1
Q ss_pred CCceeEEEEECCCCCCCC-cchhhh-------hhhHHHHHHHHhhccCCcEEEEE-------eCcHHHHHHHHHHHHhCC
Q 014919 297 PGKLILVSIQCPNPDFNR-PEHRWR-------MVQRSLVEAVSDLLVHDGKVFLQ-------SDIEEVMLRMKQQFLEYG 361 (416)
Q Consensus 297 ~~s~D~v~~~fpdpw~k~-~h~krR-------l~~~~~l~~i~r~LkpgG~l~l~-------tD~~~~~~~~~~~~~~~~ 361 (416)
.+.+|+|+..+|=.-+.. ...+.| -+...+++ +.+.++|-- +++. .+....+..+++.|...|
T Consensus 616 ~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~r-iv~~~rPk~-~llENV~glls~~~~~~~~~i~~~L~~lG 693 (1002)
T 3swr_A 616 KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS-YCDYYRPRF-FLLENVRNFVSFKRSMVLKLTLRCLVRMG 693 (1002)
T ss_dssp TTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHH-HHHHHCCSE-EEEEEEGGGGTTGGGHHHHHHHHHHHHHT
T ss_pred CCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHH-HHHHhCCCE-EEEeccHHHhccCcchHHHHHHHHHHhcC
Confidence 357899988765322222 111111 11123443 445567753 3332 122346777888888777
Q ss_pred CC
Q 014919 362 KG 363 (416)
Q Consensus 362 ~~ 363 (416)
+.
T Consensus 694 Y~ 695 (1002)
T 3swr_A 694 YQ 695 (1002)
T ss_dssp CE
T ss_pred Ce
Confidence 64
No 442
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=39.02 E-value=26 Score=34.48 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=27.7
Q ss_pred CCeEEEEeccccHHHHHHHHh---C----CCCeEEEEchHHHHH
Q 014919 231 QPLVVDIGSGNGLFLLGMARK---R----KDLNFLGLELVTHCR 267 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~---~----p~~~~iGvD~~~~a~ 267 (416)
.-.++|+|.|+|.++..+.+. . ...+|+-||++..-+
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 346999999999998877643 2 345899999876433
No 443
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=38.83 E-value=1e+02 Score=26.44 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=50.8
Q ss_pred EEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHHcCCCCCCcccccCchHHHHHHHHHHhhCCC
Q 014919 9 YAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHI 78 (416)
Q Consensus 9 ~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~ 78 (416)
+-+|.|=..|..=|.+.+.++++..++++.|-=|..|.+.+|++. +.-..+.+++..++.++..+
T Consensus 76 ~GAVa~v~~vknPI~vAr~Vme~t~HvlLvG~GA~~fA~~~G~~~-----~~l~t~~~~~~~~~~~~~~~ 140 (162)
T 1apy_A 76 VGAVGDLRRIKNAIGVARKVLEHTTHTLLVGESATTFAQSMGFIN-----EDLSTSASQALHSDWLARNC 140 (162)
T ss_dssp EEEEEEECSCSCHHHHHHHHHHHBSCSEEEHHHHHHHHHHTTCCC-----CCCCCHHHHHHHHHHHHTTS
T ss_pred eEEEEecCCCCCHHHHHHHHHhcCCCeEEEcHHHHHHHHHcCCCc-----cccCCHHHHHHHHHHHHhcc
Confidence 344444445889999999999999999999999999999999986 22234677777777777654
No 444
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=38.56 E-value=1.5e+02 Score=27.97 Aligned_cols=69 Identities=13% Similarity=0.001 Sum_probs=40.0
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
-+|.=||||. |. +.....+..|+.+++++ |..... .++.. .++.. ..|..+++ .+..+|.|++.-|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~--~~~~~-~~~~~~ll------~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE--VKRDF--PDAEV-VHELEEIT------NDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH--HHHHC--TTSEE-ESSTHHHH------TCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHhhC--CCCce-ECCHHHHh------cCCCCCEEEEcCC
Confidence 4567799987 33 23444556788888877 443321 11222 23332 46766663 3567999998765
Q ss_pred CCC
Q 014919 309 NPD 311 (416)
Q Consensus 309 dpw 311 (416)
+.+
T Consensus 75 ~~~ 77 (358)
T 3gdo_A 75 SGL 77 (358)
T ss_dssp TTT
T ss_pred cHH
Confidence 543
No 445
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=38.00 E-value=2.4e+02 Score=26.69 Aligned_cols=71 Identities=8% Similarity=-0.014 Sum_probs=41.2
Q ss_pred CCeEEEEeccccHH-HHHHHHhCCCCeEEEE-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 231 QPLVVDIGSGNGLF-LLGMARKRKDLNFLGL-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 231 ~~~vLDIGCG~G~~-~~~lA~~~p~~~~iGv-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.-+|.=||||.... ...-+...|+.+++++ |.. +++.+.+++.+... ...|..+++ .+..+|.|++.-
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll------~~~~vD~V~I~t 96 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADAR---RIATAEEIL------EDENIGLIVSAA 96 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHH------TCTTCCEEEECC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHh------cCCCCCEEEEeC
Confidence 35788899997542 2211212488888876 553 34444444544322 246776663 355799998864
Q ss_pred CCC
Q 014919 308 PNP 310 (416)
Q Consensus 308 pdp 310 (416)
|+.
T Consensus 97 p~~ 99 (361)
T 3u3x_A 97 VSS 99 (361)
T ss_dssp CHH
T ss_pred ChH
Confidence 443
No 446
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=37.71 E-value=2.1e+02 Score=28.46 Aligned_cols=72 Identities=8% Similarity=0.063 Sum_probs=42.3
Q ss_pred CCeEEEEeccc--cHHH----HHHHHhC-CCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCcee
Q 014919 231 QPLVVDIGSGN--GLFL----LGMARKR-KDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 301 (416)
Q Consensus 231 ~~~vLDIGCG~--G~~~----~~lA~~~-p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D 301 (416)
.-+|.=||||. |... ..++ +. |+.++++| |... ++.+.+++.+.+++.. ..|..+++. +..+|
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~-~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~-~~d~~ell~------~~~vD 110 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQ-QLSSQFQIVALYNPTLKSSLQTIEQLQLKHATG-FDSLESFAQ------YKDID 110 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHH-HTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEE-ESCHHHHHH------CTTCS
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHH-hcCCCeEEEEEEeCCHHHHHHHHHHcCCCccee-eCCHHHHhc------CCCCC
Confidence 35788899943 4332 3333 44 78888765 6543 3444445556654333 467666642 45699
Q ss_pred EEEEECCCC
Q 014919 302 LVSIQCPNP 310 (416)
Q Consensus 302 ~v~~~fpdp 310 (416)
.|++.-|+.
T Consensus 111 ~V~I~tp~~ 119 (479)
T 2nvw_A 111 MIVVSVKVP 119 (479)
T ss_dssp EEEECSCHH
T ss_pred EEEEcCCcH
Confidence 999875544
No 447
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=37.00 E-value=1.9e+02 Score=27.03 Aligned_cols=105 Identities=17% Similarity=0.181 Sum_probs=58.4
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhh-hhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATS-TFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~-l~~~~~~~~~~s~D~v~~~fp 308 (416)
.+|.=||+|. |. ++..|++.....+++++|......+.+.+.|... . ...|..+ . + ...|+|++.-|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~-~-~~~~~~~~~----~----~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIID-E-GTTSIAKVE----D----FSPDFVMLSSP 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCS-E-EESCTTGGG----G----GCCSEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcc-h-hcCCHHHHh----h----ccCCEEEEeCC
Confidence 5688888864 22 2333444322238999998766666666655421 1 1234333 2 1 24688887644
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcH-HHHHHHHHHH
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE-EVMLRMKQQF 357 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~-~~~~~~~~~~ 357 (416)
.. ...+.++++...|+|+..+.-.+-.. ...+.+.+.+
T Consensus 104 ~~-----------~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 104 VR-----------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp GG-----------GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred HH-----------HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhc
Confidence 22 12467888999999987765433322 2344444444
No 448
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=36.53 E-value=97 Score=29.46 Aligned_cols=69 Identities=16% Similarity=0.074 Sum_probs=39.2
Q ss_pred CeEEEEeccc-cHH-HHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~-~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
-+|.=||||. |.. ........|+.+++++ |......+.+.+. ...+. ...|..+++. +..+|.|++.-|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~-~~~~~-~~~~~~~ll~------~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRF-ISDIP-VLDNVPAMLN------QVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGT-SCSCC-EESSHHHHHH------HSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHh-cCCCc-ccCCHHHHhc------CCCCCEEEEcCC
Confidence 4577799998 652 3344455688888865 7644333322221 22222 2367666643 346899988644
No 449
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=36.47 E-value=2.7e+02 Score=27.10 Aligned_cols=74 Identities=11% Similarity=0.102 Sum_probs=40.2
Q ss_pred CCeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chHHHHHHH-H---HHhCCCcEEEEEc---ChhhhhhhhhccCCCcee
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELVTHCRDS-L---QLSGITNGYFIAT---NATSTFRSIVASYPGKLI 301 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~~~a~~~-a---~~~~l~nv~f~~~---Da~~l~~~~~~~~~~s~D 301 (416)
.-+|.=||||. |..-+......|+.+++++ |......+. + .+.+++.+..... |..+++ .+..+|
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll------~~~~vD 93 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNML------KDKNID 93 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHT------TCTTCC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHh------cCCCCC
Confidence 34677889983 3322223334688888766 553322222 2 2345544554432 555553 345799
Q ss_pred EEEEECCCC
Q 014919 302 LVSIQCPNP 310 (416)
Q Consensus 302 ~v~~~fpdp 310 (416)
.|++.-|+.
T Consensus 94 ~V~i~tp~~ 102 (444)
T 2ixa_A 94 AVFVSSPWE 102 (444)
T ss_dssp EEEECCCGG
T ss_pred EEEEcCCcH
Confidence 999875544
No 450
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=36.38 E-value=46 Score=31.09 Aligned_cols=109 Identities=15% Similarity=0.057 Sum_probs=59.6
Q ss_pred eEEEEeccccHHHHHHHHh--CCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCC
Q 014919 233 LVVDIGSGNGLFLLGMARK--RKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNP 310 (416)
Q Consensus 233 ~vLDIGCG~G~~~~~lA~~--~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdp 310 (416)
+|==||. |.....||++ ..+.++++.|......+.+.+.| ++. ..+..++ -...|.|++..|++
T Consensus 7 kIgfIGL--G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G---~~~-~~s~~e~--------~~~~dvvi~~l~~~ 72 (297)
T 4gbj_A 7 KIAFLGL--GNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG---ATV-VENAIDA--------ITPGGIVFSVLADD 72 (297)
T ss_dssp EEEEECC--STTHHHHHHHHHHTTCEEEEC-------CTTTTTT---CEE-CSSGGGG--------CCTTCEEEECCSSH
T ss_pred cEEEEec--HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC---CeE-eCCHHHH--------HhcCCceeeeccch
Confidence 3445666 4555555554 23678999998665444333333 222 2333333 23468888876665
Q ss_pred CCCCcchhhhhhhHHHHHHHHhhccCCcEEEE-EeCcHHHHHHHHHHHHhCCCCc
Q 014919 311 DFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL-QSDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 311 w~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l-~tD~~~~~~~~~~~~~~~~~~~ 364 (416)
- .+...+...+...+++|+.++- .|-.+...+++.+.+.+.+...
T Consensus 73 ~---------~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ 118 (297)
T 4gbj_A 73 A---------AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHY 118 (297)
T ss_dssp H---------HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred h---------hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCce
Confidence 1 1112334557788899887653 4666777888888888887653
No 451
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=36.04 E-value=2.7e+02 Score=25.93 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=42.6
Q ss_pred CCCeEEEEeccc--cHHHHHHHHhC-CCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 230 AQPLVVDIGSGN--GLFLLGMARKR-KDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 230 ~~~~vLDIGCG~--G~~~~~lA~~~-p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
+.-++.=||||. |..-+...++. |+.+++++ |... ++.+.+++.+... ...|..+++. +..+|.|+
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~------~~~vD~V~ 87 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPA---VFDSYEELLE------SGLVDAVD 87 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCE---EESCHHHHHH------SSCCSEEE
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCc---ccCCHHHHhc------CCCCCEEE
Confidence 346788899993 55433333445 77787665 6533 3444444555422 3567766642 45699999
Q ss_pred EECCCC
Q 014919 305 IQCPNP 310 (416)
Q Consensus 305 ~~fpdp 310 (416)
+.-|++
T Consensus 88 i~tp~~ 93 (340)
T 1zh8_A 88 LTLPVE 93 (340)
T ss_dssp ECCCGG
T ss_pred EeCCch
Confidence 875544
No 452
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=35.70 E-value=2.8e+02 Score=25.99 Aligned_cols=111 Identities=8% Similarity=0.010 Sum_probs=62.2
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCC-cEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~-nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
-+|.=||||. |..........|+.+++++ |... ++.+.+++.+.+ .+. ...|..+++. +..+|.|++.-
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~-~~~~~~~ll~------~~~~D~V~i~t 79 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTK-IHGSYESLLE------DPEIDALYVPL 79 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCE-EESSHHHHHH------CTTCCEEEECC
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCe-eeCCHHHHhc------CCCCCEEEEcC
Confidence 4677799985 4433333345677777654 6543 344444455542 233 2456666532 44689999875
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
|+.+ | .+.+..+|+.|=.+++. +....-.+.+.+..++.+..
T Consensus 80 p~~~----h----------~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 80 PTSL----H----------VEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp CGGG----H----------HHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ChHH----H----------HHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 4332 1 23344567776556653 22334467777777777654
No 453
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=35.43 E-value=1e+02 Score=29.61 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=51.2
Q ss_pred CCeEEEEeccc-cHHHHHHHHhCCCCeEEEEchHHHHHHHHHH-hCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGLELVTHCRDSLQL-SGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~-~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+.+|+=+|+|. |..+..+++.. +++++++|......+.+.+ .+. .+.....+..++ .+.+ ..+|.|+..-+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~-~~~~~~~~~~~l-~~~~----~~~DvVi~~~g 238 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGG-RVITLTATEANI-KKSV----QHADLLIGAVL 238 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-SEEEEECCHHHH-HHHH----HHCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCc-eEEEecCCHHHH-HHHH----hCCCEEEECCC
Confidence 57899999853 33344444444 5699999976544444433 333 233333333333 3333 25788866533
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
.|....+ .++ .++..+.|++||.+...
T Consensus 239 ~~~~~~~----~li----~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 239 VPGAKAP----KLV----TRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp -----------CCS----CHHHHTTSCTTCEEEEC
T ss_pred CCccccc----hhH----HHHHHHhhcCCCEEEEE
Confidence 2210111 112 34556778999987754
No 454
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=35.36 E-value=1.5e+02 Score=26.94 Aligned_cols=90 Identities=18% Similarity=0.239 Sum_probs=51.0
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+|.=||||. |. ++..|++..++.+++++|......+.+.+.+... . ...|..+. -...|.|++..|.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~-~-~~~~~~~~--------~~~aDvVilavp~ 76 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVD-E-ATADFKVF--------AALADVIILAVPI 76 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCS-E-EESCTTTT--------GGGCSEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcc-c-ccCCHHHh--------hcCCCEEEEcCCH
Confidence 4577788876 32 2334444444678999997655455554444321 1 12233222 1246888886443
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhh-ccCCcEEEE
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDL-LVHDGKVFL 342 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~-LkpgG~l~l 342 (416)
+. ...+++++... |+++..+..
T Consensus 77 ~~-----------~~~v~~~l~~~~l~~~~ivi~ 99 (290)
T 3b1f_A 77 KK-----------TIDFIKILADLDLKEDVIITD 99 (290)
T ss_dssp HH-----------HHHHHHHHHTSCCCTTCEEEC
T ss_pred HH-----------HHHHHHHHHhcCCCCCCEEEE
Confidence 21 14677788887 888766553
No 455
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=35.06 E-value=77 Score=31.21 Aligned_cols=41 Identities=12% Similarity=-0.093 Sum_probs=29.2
Q ss_pred CCeEEEEeccccHHHHHHHHhCC-CCe----EEEEchHHHHHHHHH
Q 014919 231 QPLVVDIGSGNGLFLLGMARKRK-DLN----FLGLELVTHCRDSLQ 271 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~p-~~~----~iGvD~~~~a~~~a~ 271 (416)
.-+++|+=||.|.+...|-+..- -.- +.++|+...|++..+
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~ 55 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYV 55 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHH
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHH
Confidence 35899999999999988876531 112 677998776665443
No 456
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=34.33 E-value=98 Score=28.71 Aligned_cols=90 Identities=12% Similarity=0.072 Sum_probs=57.6
Q ss_pred CCCeEEEEe-cc-ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhh-hhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIG-SG-NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATS-TFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIG-CG-~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~-l~~~~~~~~~~s~D~v~~~ 306 (416)
.+..||=+| +| .|..++.+|+.. ++++++++...+ ++.+++.|.+. .+..+-.+ + .+ .-..+|.++-.
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~-~~~~~~lGa~~--~i~~~~~~~~-~~----~~~g~D~v~d~ 222 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRN-HAFLKALGAEQ--CINYHEEDFL-LA----ISTPVDAVIDL 222 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHH-HHHHHHHTCSE--EEETTTSCHH-HH----CCSCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccch-HHHHHHcCCCE--EEeCCCcchh-hh----hccCCCEEEEC
Confidence 367888886 54 588899999876 568999975444 55666777653 23222222 2 11 12468887643
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-. ...++...++|+++|++...
T Consensus 223 ~g---------------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 223 VG---------------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SC---------------HHHHHHHGGGEEEEEEEEEC
T ss_pred CC---------------cHHHHHHHHhccCCCEEEEe
Confidence 11 12347889999999998875
No 457
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=34.02 E-value=2e+02 Score=28.67 Aligned_cols=119 Identities=13% Similarity=0.079 Sum_probs=65.9
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEEchHHHHHHHHHHhCC----------------CcEEEEEcChhhhhhhhh
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGLELVTHCRDSLQLSGI----------------TNGYFIATNATSTFRSIV 293 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l----------------~nv~f~~~Da~~l~~~~~ 293 (416)
.+|.=||+|. |. ++..|++..++.+++++|......+.+.+.+. .++++ ..|..+. +
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~----~ 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKA----I 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHH----H
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHH----h
Confidence 4688889985 32 34456666567799999986554444432111 12222 2222221 1
Q ss_pred ccCCCceeEEEEECCCCCCCCc---chhhhh-hhHHHHHHHHhhccCCcEEEEE-eCcHHHHHHHHHHHHh
Q 014919 294 ASYPGKLILVSIQCPNPDFNRP---EHRWRM-VQRSLVEAVSDLLVHDGKVFLQ-SDIEEVMLRMKQQFLE 359 (416)
Q Consensus 294 ~~~~~s~D~v~~~fpdpw~k~~---h~krRl-~~~~~l~~i~r~LkpgG~l~l~-tD~~~~~~~~~~~~~~ 359 (416)
...|.|++..|.|..... ++.-.+ .-...++.+.+.|++|..+... |-.....+.+.+.+++
T Consensus 85 ----~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 85 ----AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp ----HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred ----hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 246889888777742110 000001 0136678888899998766653 4344455667777776
No 458
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=32.59 E-value=2.3e+02 Score=26.06 Aligned_cols=106 Identities=13% Similarity=0.027 Sum_probs=56.6
Q ss_pred CeEEEEeccc-cHH-HHHHHHhCCCCeEE-EEchHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFL-GLELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~-G~~-~~~lA~~~p~~~~i-GvD~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
.+|.=||||. |.. ......+.|+.+++ .+|... ++.+.+++.+.+ ...|...+ ...+|.|++.-
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~----~~~~~~~l--------~~~~D~V~i~t 73 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP----YADSLSSL--------AASCDAVFVHS 73 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC----BCSSHHHH--------HTTCSEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC----ccCcHHHh--------hcCCCEEEEeC
Confidence 4677899985 432 33333446777877 456432 233333444543 23343332 23589998865
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
|+.+ ..+.+...|+.|-.+++. +-...-.+.+.+..++.+..
T Consensus 74 p~~~--------------h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 74 STAS--------------HFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp CTTH--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred Cchh--------------HHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 5332 123344567776556654 12334456677777777654
No 459
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=32.41 E-value=42 Score=31.44 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=29.8
Q ss_pred CceeEEEEECCCCCCCCcchhhh-h----hhHHHHHHHHhhccCCcEEEEEe
Q 014919 298 GKLILVSIQCPNPDFNRPEHRWR-M----VQRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~~h~krR-l----~~~~~l~~i~r~LkpgG~l~l~t 344 (416)
+.+|+|++|..-|+ .-||-.. . ...-+-....+.|+|||.+++..
T Consensus 210 grYDlVfvNv~Tpy--R~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~a 259 (324)
T 3trk_A 210 GRYDLVVINIHTPF--RIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRA 259 (324)
T ss_dssp CCEEEEEEECCCCC--CSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred CceeEEEEecCCcc--ccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 78999999987775 2333211 1 11233455678999999999873
No 460
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=32.23 E-value=2e+02 Score=27.31 Aligned_cols=106 Identities=15% Similarity=0.037 Sum_probs=56.6
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
-+|.=||||. |. +.....+..|+.+++++ |......+ +.. ..+.. ..|..+++ .+..+|.|++.-|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~--~~~~~-~~~~~~ll------~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK--RDL--PDVTV-IASPEAAV------QHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--HHC--TTSEE-ESCHHHHH------TCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhC--CCCcE-ECCHHHHh------cCCCCCEEEEeCC
Confidence 4678899986 43 24445566788888876 55432211 122 23332 46766663 3567999998755
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 362 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~ 362 (416)
+.+ | .+.+.+.|+.|=.+++. +....-.+.+.+..++.+.
T Consensus 77 ~~~----H----------~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 77 NAT----H----------APLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQR 119 (364)
T ss_dssp GGG----H----------HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred hHH----H----------HHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 432 1 12333455555444442 1223334555555555554
No 461
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=31.82 E-value=2.6e+02 Score=26.74 Aligned_cols=77 Identities=16% Similarity=0.139 Sum_probs=44.7
Q ss_pred CeEEEEeccc----cHHHHHHHHhCCCCeEEE-E-chH-HHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEE
Q 014919 232 PLVVDIGSGN----GLFLLGMARKRKDLNFLG-L-ELV-THCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 304 (416)
Q Consensus 232 ~~vLDIGCG~----G~~~~~lA~~~p~~~~iG-v-D~~-~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~ 304 (416)
-+|.=||||. |..-.......++.++++ + |.. +++.+.+++.+.+..+ ...|..+++...- ..+..+|.|+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~-~~~~~~~ll~~~~-~~~~~vD~V~ 90 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSER-CYADYLSMFEQEA-RRADGIQAVS 90 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGG-BCSSHHHHHHHHT-TCTTCCSEEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcce-eeCCHHHHHhccc-ccCCCCCEEE
Confidence 4688899996 444344344567788886 4 864 4455555566664211 2357666643200 0124599999
Q ss_pred EECCCC
Q 014919 305 IQCPNP 310 (416)
Q Consensus 305 ~~fpdp 310 (416)
+.-|+.
T Consensus 91 i~tp~~ 96 (398)
T 3dty_A 91 IATPNG 96 (398)
T ss_dssp EESCGG
T ss_pred ECCCcH
Confidence 875544
No 462
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=31.10 E-value=1.7e+02 Score=26.95 Aligned_cols=107 Identities=11% Similarity=-0.004 Sum_probs=57.4
Q ss_pred CeEEEEeccc-cHHHHHHHHhCCCCeEE-EEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 232 PLVVDIGSGN-GLFLLGMARKRKDLNFL-GLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 232 ~~vLDIGCG~-G~~~~~lA~~~p~~~~i-GvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
.+|.=||||. |........+.|+.+++ .+|......+.+.+ .+. ...|..+++ .+..+|.|++.-|+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~----~~~-~~~~~~~~l------~~~~~D~V~i~tp~ 79 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP----GCV-IESDWRSVV------SAPEVEAVIIATPP 79 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT----TCE-EESSTHHHH------TCTTCCEEEEESCG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh----hCc-ccCCHHHHh------hCCCCCEEEEeCCh
Confidence 5688899985 54433333446777766 45654432222111 133 245555542 24568999987554
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
.+ | .+.+...|+.|-.+++. +-...-.+.+.+..++.+..
T Consensus 80 ~~----h----------~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 80 AT----H----------AEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp GG----H----------HHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HH----H----------HHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 32 1 22334556666555554 22334456677777776654
No 463
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=29.69 E-value=3.3e+02 Score=24.96 Aligned_cols=106 Identities=13% Similarity=-0.008 Sum_probs=52.9
Q ss_pred eEEEEeccc-cHHH-H-HHHHhCCCCeEEEE-chHHH-HHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 233 LVVDIGSGN-GLFL-L-GMARKRKDLNFLGL-ELVTH-CRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 233 ~vLDIGCG~-G~~~-~-~lA~~~p~~~~iGv-D~~~~-a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
+|.=||||. |... . .++ + |+.+++++ |.... +.+.+++.+... ...|..++ + .+..+|.|++.-
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~-~-~~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~----l--~~~~~D~V~i~t 70 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIR-A-TGGEVVSMMSTSAERGAAYATENGIGK---SVTSVEEL----V--GDPDVDAVYVST 70 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHH-H-TTCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHH----H--TCTTCCEEEECS
T ss_pred eEEEEcccHHHHHhhhHHhh-c-CCCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHH----h--cCCCCCEEEEeC
Confidence 355689974 4332 2 333 3 78888764 76443 333344445432 13455444 2 244689998875
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
|+.+ | .+.+...|+.|-.+++. +-...-.+.+.+..++.+..
T Consensus 71 p~~~----h----------~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 71 TNEL----H----------REQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp CGGG----H----------HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred ChhH----h----------HHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 5432 1 12233455555444442 11233345555555555543
No 464
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=29.53 E-value=92 Score=29.61 Aligned_cols=68 Identities=7% Similarity=0.017 Sum_probs=38.8
Q ss_pred CeEEEEeccc-cHH-HHHHHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 232 ~~vLDIGCG~-G~~-~~~lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
-+|.=||||. |.. .....+..|+.+++++ |.... ++. ....++.. ..|..+++ .+..+|.|++.-|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~---~~~-~~~~~~~~-~~~~~~ll------~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKE---LSK-ERYPQASI-VRSFKELT------EDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCC---GGG-TTCTTSEE-ESCSHHHH------TCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHH---HHH-HhCCCCce-ECCHHHHh------cCCCCCEEEEeCC
Confidence 4567789987 332 3444456788888876 44321 111 12223433 46766663 3557999998755
Q ss_pred CC
Q 014919 309 NP 310 (416)
Q Consensus 309 dp 310 (416)
+.
T Consensus 75 ~~ 76 (362)
T 3fhl_A 75 DN 76 (362)
T ss_dssp GG
T ss_pred hH
Confidence 43
No 465
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=29.29 E-value=29 Score=32.97 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=52.8
Q ss_pred CeEEEE-ecc-ccHHHHHHHHhCCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh---hhhhhccCCCceeEEEEE
Q 014919 232 PLVVDI-GSG-NGLFLLGMARKRKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATST---FRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 232 ~~vLDI-GCG-~G~~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l---~~~~~~~~~~s~D~v~~~ 306 (416)
..+|=. |+| .|..++.+|+.. +++++++|.+..-++.+++.|.+.+ +..+-.++ +.+.. ....+|.++-.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~v~~~~--~~~g~D~vid~ 240 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGAAHV--LNEKAPDFEATLREVM--KAEQPRIFLDA 240 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTCSEE--EETTSTTHHHHHHHHH--HHHCCCEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEE--EECCcHHHHHHHHHHh--cCCCCcEEEEC
Confidence 445432 544 577777888876 5699999975544455556665432 22222222 11111 11358887643
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
-. ...++...+.|+++|++.+.
T Consensus 241 ~g---------------~~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 241 VT---------------GPLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp SC---------------HHHHHHHHHHSCTTCEEEEC
T ss_pred CC---------------ChhHHHHHhhhcCCCEEEEE
Confidence 11 13346788999999998875
No 466
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=28.60 E-value=1.4e+02 Score=30.30 Aligned_cols=101 Identities=8% Similarity=-0.055 Sum_probs=57.4
Q ss_pred CeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCC
Q 014919 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPN 309 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpd 309 (416)
..++=+| .|.++..+|+.. -+..++.+|......+.+... .++.++.+|+.+. +..-...-...|.+.+...|
T Consensus 128 ~hviI~G--~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~--~~~~~i~Gd~~~~-~~L~~a~i~~a~~vi~t~~D 202 (565)
T 4gx0_A 128 GHILIFG--IDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ--EGFKVVYGSPTDA-HVLAGLRVAAARSIIANLSD 202 (565)
T ss_dssp SCEEEES--CCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS--CSSEEEESCTTCH-HHHHHTTGGGCSEEEECSCH
T ss_pred CeEEEEC--CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh--cCCeEEEeCCCCH-HHHHhcCcccCCEEEEeCCc
Confidence 4455544 567888888753 356899999876655555443 1578999999764 11111123467777763211
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeCcHHHH
Q 014919 310 PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 350 (416)
Q Consensus 310 pw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD~~~~~ 350 (416)
. .+ .......+.+. +..++....++.+.
T Consensus 203 ~-----------~n-~~~~~~ar~~~-~~~iiar~~~~~~~ 230 (565)
T 4gx0_A 203 P-----------DN-ANLCLTVRSLC-QTPIIAVVKEPVHG 230 (565)
T ss_dssp H-----------HH-HHHHHHHHTTC-CCCEEEECSSGGGH
T ss_pred H-----------HH-HHHHHHHHHhc-CceEEEEECCHHHH
Confidence 1 11 23333456666 66666665554443
No 467
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=28.60 E-value=1.9e+02 Score=29.09 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=59.7
Q ss_pred CCCeEEEEeccccHHHHHHHHhCCCCe-EEEEch-H--H--HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKRKDLN-FLGLEL-V--T--HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~p~~~-~iGvD~-~--~--~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
++.+|.=||||+=..+.++=-+-.+.+ ++|+-- + + ...++|++.|+. ..+..+. -..-|+|
T Consensus 36 kgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~-----v~~~~eA--------~~~ADvV 102 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFK-----VGTYEEL--------IPQADLV 102 (491)
T ss_dssp TTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCE-----EEEHHHH--------GGGCSEE
T ss_pred cCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCE-----ecCHHHH--------HHhCCEE
Confidence 368899999988766665554434444 345531 1 1 345566777753 2344433 2356899
Q ss_pred EEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC
Q 014919 304 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 345 (416)
Q Consensus 304 ~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD 345 (416)
.+.-||. .++...+.+...||||-.|.|+.-
T Consensus 103 ~~L~PD~-----------~q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 103 INLTPDK-----------QHSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp EECSCGG-----------GHHHHHHHHGGGSCTTCEEEESSC
T ss_pred EEeCChh-----------hHHHHHHHHHhhCCCCCEEEecCc
Confidence 8887765 245677889999999999999653
No 468
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=28.50 E-value=3.6e+02 Score=26.27 Aligned_cols=72 Identities=11% Similarity=-0.038 Sum_probs=42.0
Q ss_pred CeEEEEec----cc-cHHHHHHHHhC-CCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEE
Q 014919 232 PLVVDIGS----GN-GLFLLGMARKR-KDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 303 (416)
Q Consensus 232 ~~vLDIGC----G~-G~~~~~lA~~~-p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v 303 (416)
-+|.=||| |. |..-+....+. |+.+++++ |... ++.+.+++.+.+++.. ..|..+++. +..+|.|
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~-~~~~~~ll~------~~~vD~V 93 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATA-FPTLESFAS------SSTIDMI 93 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEE-ESSHHHHHH------CSSCSEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCccee-eCCHHHHhc------CCCCCEE
Confidence 56888999 55 33333333445 88887764 6543 3334444556654433 457666642 4569999
Q ss_pred EEECCCC
Q 014919 304 SIQCPNP 310 (416)
Q Consensus 304 ~~~fpdp 310 (416)
++.-|+.
T Consensus 94 ~i~tp~~ 100 (438)
T 3btv_A 94 VIAIQVA 100 (438)
T ss_dssp EECSCHH
T ss_pred EEeCCcH
Confidence 9875544
No 469
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=28.31 E-value=59 Score=30.81 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=53.3
Q ss_pred C-CeEEEEec--cccHHHHHHHHhCCCCeEEEEchH-H---HHHHHHHHhCCCcEEEEE----cChhhhhhhhhccCCCc
Q 014919 231 Q-PLVVDIGS--GNGLFLLGMARKRKDLNFLGLELV-T---HCRDSLQLSGITNGYFIA----TNATSTFRSIVASYPGK 299 (416)
Q Consensus 231 ~-~~vLDIGC--G~G~~~~~lA~~~p~~~~iGvD~~-~---~a~~~a~~~~l~nv~f~~----~Da~~l~~~~~~~~~~s 299 (416)
+ ..||=+|+ |.|..++.+|+.. +++++++... . ..++.+++.|.+.+--.. .|..+.+.+........
T Consensus 167 g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 167 GKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 5 78998887 5688888999875 5677777531 1 123344556765321111 12111111111000246
Q ss_pred eeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE
Q 014919 300 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 343 (416)
Q Consensus 300 ~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~ 343 (416)
+|.++-.-. .+.+. ...++|+++|++.+.
T Consensus 246 ~Dvvid~~G--------------~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 246 AKLALNCVG--------------GKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp EEEEEESSC--------------HHHHH-HHHHTSCTTCEEEEC
T ss_pred ceEEEECCC--------------chhHH-HHHHHhccCCEEEEe
Confidence 898864311 12333 667999999998763
No 470
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=27.83 E-value=3.9e+02 Score=25.25 Aligned_cols=127 Identities=8% Similarity=0.056 Sum_probs=71.4
Q ss_pred CCeEEEEeccccHHHHHHHHh-CCCCeEEEEchHHHH-HH--HHHH-------h----------------CCCcEEEEEc
Q 014919 231 QPLVVDIGSGNGLFLLGMARK-RKDLNFLGLELVTHC-RD--SLQL-------S----------------GITNGYFIAT 283 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~-~p~~~~iGvD~~~~a-~~--~a~~-------~----------------~l~nv~f~~~ 283 (416)
...|+-+|||.=.....|... .++..|+=||.=... .+ .... . .-.+.+++-+
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 578999999998888888764 367899999941111 11 1111 0 1357899999
Q ss_pred Chhhh--hhhhhc---cCCCceeEEEEECCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEe--CcHHHHHHHHHH
Q 014919 284 NATST--FRSIVA---SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS--DIEEVMLRMKQQ 356 (416)
Q Consensus 284 Da~~l--~~~~~~---~~~~s~D~v~~~fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~t--D~~~~~~~~~~~ 356 (416)
|+.+. ++..+. +.+..--++.+-..-.+..... ...+++.+.+...++..+.+.. ....+...|.+.
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~------~~~ll~~ia~~f~~~~~i~yE~i~p~d~fg~~M~~~ 244 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQ------SANLLKWAANSFERAMFINYEQVNMGDRFGQIMIEN 244 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH------HHHHHHHHHHHCSSEEEEEEEECCTTSHHHHHHHHH
T ss_pred ccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHH------HHHHHHHHHHhCCCceEEEEeccCCCCHHHHHHHHH
Confidence 99763 222110 1222222333333333322211 2477888887765544443321 234577888888
Q ss_pred HHhCCCC
Q 014919 357 FLEYGKG 363 (416)
Q Consensus 357 ~~~~~~~ 363 (416)
+++.|..
T Consensus 245 l~~~g~p 251 (334)
T 3iei_A 245 LRRRQCD 251 (334)
T ss_dssp HHTTTCC
T ss_pred HHHhCCC
Confidence 8876653
No 471
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=27.76 E-value=61 Score=30.60 Aligned_cols=108 Identities=10% Similarity=0.079 Sum_probs=55.4
Q ss_pred eEEEEeccc-cH-HHHH-HHHhCCCCeEEEE-chHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 233 LVVDIGSGN-GL-FLLG-MARKRKDLNFLGL-ELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 233 ~vLDIGCG~-G~-~~~~-lA~~~p~~~~iGv-D~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
+|.=||||. |. +... +....|+.+++++ |......+.+.+. .++.. ..|..+++ .+..+|.|++.-|
T Consensus 4 rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~--~~~~~-~~~~~~ll------~~~~~D~V~i~tp 74 (345)
T 3f4l_A 4 NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIY--SHIHF-TSDLDEVL------NDPDVKLVVVCTH 74 (345)
T ss_dssp EEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGG--TTCEE-ESCTHHHH------TCTTEEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhc--CCCce-ECCHHHHh------cCCCCCEEEEcCC
Confidence 456689987 43 2344 3356788888865 5432111211121 23432 46666653 3557999998754
Q ss_pred CCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
+.. | .+.+.+.|+.|=.+++. +....-.+.+.+..++.+..
T Consensus 75 ~~~----h----------~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~ 118 (345)
T 3f4l_A 75 ADS----H----------FEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLT 118 (345)
T ss_dssp GGG----H----------HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred hHH----H----------HHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 432 1 22334555555444442 22333455566655555543
No 472
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=26.56 E-value=1.7e+02 Score=27.20 Aligned_cols=107 Identities=18% Similarity=0.101 Sum_probs=61.7
Q ss_pred EEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECCCCC
Q 014919 234 VVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPD 311 (416)
Q Consensus 234 vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fpdpw 311 (416)
|==||. |.....||++. .+..+++.|......+.+...|. + ...+..++ -...|.|++..||+-
T Consensus 6 IgfIGl--G~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga---~-~a~s~~e~--------~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 6 IAFIGL--GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGA---S-AARSARDA--------VQGADVVISMLPASQ 71 (300)
T ss_dssp EEEECC--STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC---E-ECSSHHHH--------HTTCSEEEECCSCHH
T ss_pred EEEeee--hHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCC---E-EcCCHHHH--------HhcCCceeecCCchH
Confidence 334555 45555555542 36789999987766666655553 2 22333333 135688888766651
Q ss_pred CCCcchhhhhhhHHHHHH---HHhhccCCcEEE-EEeCcHHHHHHHHHHHHhCCCCc
Q 014919 312 FNRPEHRWRMVQRSLVEA---VSDLLVHDGKVF-LQSDIEEVMLRMKQQFLEYGKGK 364 (416)
Q Consensus 312 ~k~~h~krRl~~~~~l~~---i~r~LkpgG~l~-l~tD~~~~~~~~~~~~~~~~~~~ 364 (416)
.+ .+.+.. +...|+||..++ ++|-.+...+++.+.+++.+...
T Consensus 72 ---------~v-~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~ 118 (300)
T 3obb_A 72 ---------HV-EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAM 118 (300)
T ss_dssp ---------HH-HHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred ---------HH-HHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 01 122211 344567776554 35677778888888888887653
No 473
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=26.43 E-value=91 Score=29.49 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=37.4
Q ss_pred CceeEEEEECCCCCCCCcch-h-----hhhhhHHHHHHHHhhccCCcEEEEEe-CcH-HHHHHHHHHHHh
Q 014919 298 GKLILVSIQCPNPDFNRPEH-R-----WRMVQRSLVEAVSDLLVHDGKVFLQS-DIE-EVMLRMKQQFLE 359 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~~h~-k-----rRl~~~~~l~~i~r~LkpgG~l~l~t-D~~-~~~~~~~~~~~~ 359 (416)
+.+|+|+++...|. ..|+ . .|+++- +++...++|+|||.|+++. +.. .-.+.....+++
T Consensus 205 ~k~DvV~SDMApn~--sGh~yqQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR 271 (320)
T 2hwk_A 205 PKYDIIFVNVRTPY--KYHHYQQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIAR 271 (320)
T ss_dssp CCEEEEEEECCCCC--CSCHHHHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHT
T ss_pred CcCCEEEEcCCCCC--CCccccccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHH
Confidence 67999999865553 3333 2 133433 6788899999999999874 222 123445555555
No 474
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=26.24 E-value=2.4e+02 Score=26.35 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=41.9
Q ss_pred CCeEEEEeccc-cHH-HHHHH------HhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCce
Q 014919 231 QPLVVDIGSGN-GLF-LLGMA------RKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKL 300 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~-~~~lA------~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~ 300 (416)
.-+|-=||||. |.. +..+. ...|+.+++|| |... ++.+.+++.+.++ ...|..+++. +..+
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~------~~~i 95 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIA------DPEV 95 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHH------CTTC
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhc------CCCC
Confidence 34677899984 221 11111 12467888887 5533 3444455666653 3577777643 5679
Q ss_pred eEEEEECCCCC
Q 014919 301 ILVSIQCPNPD 311 (416)
Q Consensus 301 D~v~~~fpdpw 311 (416)
|.|++.-|+.+
T Consensus 96 DaV~IatP~~~ 106 (393)
T 4fb5_A 96 DVVSVTTPNQF 106 (393)
T ss_dssp CEEEECSCGGG
T ss_pred cEEEECCChHH
Confidence 99998766554
No 475
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=26.03 E-value=2.1e+02 Score=28.34 Aligned_cols=71 Identities=8% Similarity=-0.010 Sum_probs=43.8
Q ss_pred CCeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
..+|+=+|| |..+..+|+.. .+..++.||..+...+++.+. + ++..+++|+.+. +-.-...-...|.+..-
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~-~-~~~~i~Gd~~~~-~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK-Y-DLRVVNGHASHP-DVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH-S-SCEEEESCTTCH-HHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-c-CcEEEEEcCCCH-HHHHhcCCCcCCEEEEE
Confidence 345555555 77888888864 356899999876666655432 2 478899999874 11101123567777553
No 476
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=26.02 E-value=1.9e+02 Score=28.92 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=42.4
Q ss_pred CCeEEEEeccc-cHHHHHHHHhCCCCeEEEE-chH-HHHHHHHHHh-CC-CcE-----------------EEEEcChhhh
Q 014919 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGL-ELV-THCRDSLQLS-GI-TNG-----------------YFIATNATST 288 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~~~~lA~~~p~~~~iGv-D~~-~~a~~~a~~~-~l-~nv-----------------~f~~~Da~~l 288 (416)
.-+|-=||||. |........+.|+.++++| |.. .++.+.+++. |. .++ .....|..++
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 45688899974 4444444445788887776 332 3343333332 31 111 2245666665
Q ss_pred hhhhhccCCCceeEEEEECCCCC
Q 014919 289 FRSIVASYPGKLILVSIQCPNPD 311 (416)
Q Consensus 289 ~~~~~~~~~~s~D~v~~~fpdpw 311 (416)
+ .+..+|.|+..-|+|+
T Consensus 103 L------~d~dIDaVviaTp~p~ 119 (446)
T 3upl_A 103 L------SNPLIDVIIDATGIPE 119 (446)
T ss_dssp H------TCTTCCEEEECSCCHH
T ss_pred h------cCCCCCEEEEcCCChH
Confidence 3 3567999988766654
No 477
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=25.72 E-value=25 Score=35.17 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=25.2
Q ss_pred CCeEEEEeccccHHHHHHHHhC----C-CCeEEEEchH
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR----K-DLNFLGLELV 263 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~----p-~~~~iGvD~~ 263 (416)
...++|+|.|+|.++..+.+.. + ..+|+-||.|
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~S 175 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLS 175 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTT
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcC
Confidence 4689999999999887775432 1 2479999974
No 478
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=25.39 E-value=3.2e+02 Score=23.40 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=41.5
Q ss_pred CCCeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhCCCcE-EEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 230 AQPLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSGITNG-YFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 230 ~~~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~l~nv-~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
.+.+||=.|+ +|..+..++++. .+.++++++......+.... .++ +++.+|+.+.+.+.+ +.+|.|+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~----~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---RGASDIVVANLEEDFSHAF----ASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---TTCSEEEECCTTSCCGGGG----TTCSEEEEC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---CCCceEEEcccHHHHHHHH----cCCCEEEEC
Confidence 3678888885 455555555432 36799999864332222222 267 899999863223333 368888755
Q ss_pred C
Q 014919 307 C 307 (416)
Q Consensus 307 f 307 (416)
-
T Consensus 92 a 92 (236)
T 3e8x_A 92 A 92 (236)
T ss_dssp C
T ss_pred C
Confidence 3
No 479
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=24.72 E-value=2.3e+02 Score=28.10 Aligned_cols=117 Identities=12% Similarity=0.010 Sum_probs=62.6
Q ss_pred CeEEEEeccccHHHHHHHHhC--CCCeEEEEchHHHHHHHHHHhC-----------------CCcEEEEEcChhhhhhhh
Q 014919 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLELVTHCRDSLQLSG-----------------ITNGYFIATNATSTFRSI 292 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~~--p~~~~iGvD~~~~a~~~a~~~~-----------------l~nv~f~~~Da~~l~~~~ 292 (416)
-++-=||+| ..+..+|... .+.+++++|..+...+.+.+.. ..++++ ..|..+.
T Consensus 9 ~~~~vIGlG--~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea---- 81 (446)
T 4a7p_A 9 VRIAMIGTG--YVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEG---- 81 (446)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH----
T ss_pred eEEEEEcCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHH----
Confidence 345556665 4544444332 2568999997544333332211 123443 2344332
Q ss_pred hccCCCceeEEEEECCCCCCC-CcchhhhhhhHHHHHHHHhhccCCcEEEEE-eCcHHHHHHHHHHHHhC
Q 014919 293 VASYPGKLILVSIQCPNPDFN-RPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ-SDIEEVMLRMKQQFLEY 360 (416)
Q Consensus 293 ~~~~~~s~D~v~~~fpdpw~k-~~h~krRl~~~~~l~~i~r~LkpgG~l~l~-tD~~~~~~~~~~~~~~~ 360 (416)
. ...|.|++..|.|.-. +...--+.+ .+.++.+.+.|++|-.+... |-.....+.+.+.+.+.
T Consensus 82 ~----~~aDvvii~Vptp~~~~~~~~Dl~~v-~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 82 V----KDADAVFIAVGTPSRRGDGHADLSYV-FAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp H----TTCSEEEECCCCCBCTTTCCBCTHHH-HHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred H----hcCCEEEEEcCCCCccccCCccHHHH-HHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 1 2468888877777421 111100011 35677888899998877665 33445667777777664
No 480
>3s4y_A Thiamin pyrophosphokinase 1; structural genomics, structural genomics consortium, transferase; HET: TPP; 1.80A {Homo sapiens} PDB: 1ig3_A* 2f17_A*
Probab=24.63 E-value=1.2e+02 Score=27.75 Aligned_cols=39 Identities=13% Similarity=-0.025 Sum_probs=31.1
Q ss_pred CcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHH
Q 014919 7 KPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHA 48 (416)
Q Consensus 7 ~p~~~i~GGaKv~dki~~~~~l~~~~d~~~~gG~~a~~fl~a 48 (416)
.|.+.|+.+..+.+ .++.+++.++.++-.-+=||..+..
T Consensus 21 ~~~~lIv~ng~~~~---~~~~~~~~~~~~i~aDgGa~~l~~~ 59 (247)
T 3s4y_A 21 LKYCLVILNQPLDN---YFRHLWNKALLRACADGGANRLYDI 59 (247)
T ss_dssp CCEEEEECSSCCCT---THHHHHHHCSCEEEETTHHHHHHHH
T ss_pred CCEEEEEECCcchH---HHHHHHhhCCEEEEEchHHHHHHHh
Confidence 46777777777875 7889999999988878888888874
No 481
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=23.78 E-value=2.1e+02 Score=26.52 Aligned_cols=107 Identities=14% Similarity=0.064 Sum_probs=54.6
Q ss_pred CeEEEEeccccHH---HHHHHHhCCCCeEEEE-chHH-HHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEE
Q 014919 232 PLVVDIGSGNGLF---LLGMARKRKDLNFLGL-ELVT-HCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 306 (416)
Q Consensus 232 ~~vLDIGCG~G~~---~~~lA~~~p~~~~iGv-D~~~-~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~ 306 (416)
-+|-=||||.... +..+ +.|+.+++++ |... ++.+.+++.+. +. ...|..+++ .+..+|.|++.
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l--~~~~~~lvav~d~~~~~~~~~a~~~~~--~~-~~~~~~~ll------~~~~~D~V~i~ 73 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQL--IDAGAELAGVFESDSDNRAKFTSLFPS--VP-FAASAEQLI------TDASIDLIACA 73 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHH--HHTTCEEEEEECSCTTSCHHHHHHSTT--CC-BCSCHHHHH------TCTTCCEEEEC
T ss_pred cEEEEECCChHHHHHhhhhh--cCCCcEEEEEeCCCHHHHHHHHHhcCC--Cc-ccCCHHHHh------hCCCCCEEEEe
Confidence 4577799997653 2222 2467887765 6432 22232333322 22 235655553 34579999987
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEE---eCcHHHHHHHHHHHHhCCCC
Q 014919 307 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 307 fpdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~---tD~~~~~~~~~~~~~~~~~~ 363 (416)
-|+.+ | .+.+...|+.|=-+++. +-...-.+.+.+..++.+..
T Consensus 74 tp~~~----h----------~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~ 119 (336)
T 2p2s_A 74 VIPCD----R----------AELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRK 119 (336)
T ss_dssp SCGGG----H----------HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCC
T ss_pred CChhh----H----------HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 55443 1 12333455555445542 12233455566666665543
No 482
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=23.15 E-value=2.6e+02 Score=27.06 Aligned_cols=111 Identities=13% Similarity=0.121 Sum_probs=57.5
Q ss_pred EEEEeccccHHHHHHHHhCC-CCeEEEEchHHHHHHHHHHhCCC---------------cEEEEEcChhhhhhhhhccCC
Q 014919 234 VVDIGSGNGLFLLGMARKRK-DLNFLGLELVTHCRDSLQLSGIT---------------NGYFIATNATSTFRSIVASYP 297 (416)
Q Consensus 234 vLDIGCG~G~~~~~lA~~~p-~~~~iGvD~~~~a~~~a~~~~l~---------------nv~f~~~Da~~l~~~~~~~~~ 297 (416)
|.=||+ |..+..+|...- +.+++++|......+.+.+.+.. ++++ ..|..+. +
T Consensus 3 I~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~----~---- 71 (402)
T 1dlj_A 3 IAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAA----Y---- 71 (402)
T ss_dssp EEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHH----H----
T ss_pred EEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHH----h----
Confidence 445677 455555444311 57899999865544444433321 2332 2232221 1
Q ss_pred CceeEEEEECCCCCCCCcchhhhh-hhHHHHHHHHhhccCCcEEEE-EeCcHHHHHHHHHHH
Q 014919 298 GKLILVSIQCPNPDFNRPEHRWRM-VQRSLVEAVSDLLVHDGKVFL-QSDIEEVMLRMKQQF 357 (416)
Q Consensus 298 ~s~D~v~~~fpdpw~k~~h~krRl-~~~~~l~~i~r~LkpgG~l~l-~tD~~~~~~~~~~~~ 357 (416)
...|.|++..|.|..+. +..-.+ .-.+.++.+.+ |++|..++. +|-.....+.+.+.+
T Consensus 72 ~~aDvviiavpt~~~~~-~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~ 131 (402)
T 1dlj_A 72 KEAELVIIATPTNYNSR-INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKF 131 (402)
T ss_dssp HHCSEEEECCCCCEETT-TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHT
T ss_pred cCCCEEEEecCCCcccC-CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHh
Confidence 24688888766653110 000000 12466778888 888887776 455445555555544
No 483
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=22.61 E-value=4e+02 Score=26.16 Aligned_cols=121 Identities=12% Similarity=0.051 Sum_probs=63.5
Q ss_pred CeEEEEeccc-cH-HHHHHHHhCCCCeEEEEchHHHHHHHHHHhCC----------------CcEEEEEcChhhhhhhhh
Q 014919 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGLELVTHCRDSLQLSGI----------------TNGYFIATNATSTFRSIV 293 (416)
Q Consensus 232 ~~vLDIGCG~-G~-~~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l----------------~nv~f~~~Da~~l~~~~~ 293 (416)
.+|.=||+|. |. ++..|++..++.+++++|......+.+++.+. .++++ ..|..+. +
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~----~ 80 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDA----I 80 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHH----H
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHH----H
Confidence 4577788875 33 23445555456789999986544443321110 13333 2232222 1
Q ss_pred ccCCCceeEEEEECCCCCCCCcc---hhhhh-hhHHHHHHHHhhccCCcEEEEE-eCcHHHHHHHHHHHHhCC
Q 014919 294 ASYPGKLILVSIQCPNPDFNRPE---HRWRM-VQRSLVEAVSDLLVHDGKVFLQ-SDIEEVMLRMKQQFLEYG 361 (416)
Q Consensus 294 ~~~~~s~D~v~~~fpdpw~k~~h---~krRl-~~~~~l~~i~r~LkpgG~l~l~-tD~~~~~~~~~~~~~~~~ 361 (416)
...|.|++..|.|...+.- +.-.+ .-...++.+.+.|++|..+... |-.....+.+.+.+++.+
T Consensus 81 ----~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 81 ----KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp ----HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred ----hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 2468888887776421110 00000 0135667788888887766543 333344556666776653
No 484
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=22.41 E-value=95 Score=32.18 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCCceeEEEEECCCCCCCCcchhhhhh-----hHHHHHHHHhhccCCcEEEEEe
Q 014919 296 YPGKLILVSIQCPNPDFNRPEHRWRMV-----QRSLVEAVSDLLVHDGKVFLQS 344 (416)
Q Consensus 296 ~~~s~D~v~~~fpdpw~k~~h~krRl~-----~~~~l~~i~r~LkpgG~l~l~t 344 (416)
..+.||+|++|-..|+ .-||-..=. ..-+-....+.|+|||.+++..
T Consensus 218 ~~~ryDlvfvn~~t~y--r~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~ 269 (670)
T 4gua_A 218 PQARYDLVFINIGTKY--RNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKS 269 (670)
T ss_dssp CCCCEEEEEECCCCCC--CSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCcccEEEEecCCCc--ccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEE
Confidence 3579999999977775 334322111 1233455678999999998874
No 485
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=22.18 E-value=4.9e+02 Score=25.82 Aligned_cols=116 Identities=16% Similarity=0.095 Sum_probs=62.1
Q ss_pred CCeEEEEeccc-cHH-HHHHHHhCCCCeEEEEchHHHHHHHHHHhCC-----------------CcEEEEEcChhhhhhh
Q 014919 231 QPLVVDIGSGN-GLF-LLGMARKRKDLNFLGLELVTHCRDSLQLSGI-----------------TNGYFIATNATSTFRS 291 (416)
Q Consensus 231 ~~~vLDIGCG~-G~~-~~~lA~~~p~~~~iGvD~~~~a~~~a~~~~l-----------------~nv~f~~~Da~~l~~~ 291 (416)
..+|.=||+|. |.. +..||+. +.+++++|..+...+.+++.+. .++++ ..|..+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a--- 81 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAA--- 81 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHH---
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHH---
Confidence 46777888874 332 3344444 5689999986655554443321 12332 2232221
Q ss_pred hhccCCCceeEEEEECCCCCCCCcchhhhh-hhHHHHHHHHhhccCCcEEEEEe-CcHHHHHHHHHHHHh
Q 014919 292 IVASYPGKLILVSIQCPNPDFNRPEHRWRM-VQRSLVEAVSDLLVHDGKVFLQS-DIEEVMLRMKQQFLE 359 (416)
Q Consensus 292 ~~~~~~~s~D~v~~~fpdpw~k~~h~krRl-~~~~~l~~i~r~LkpgG~l~l~t-D~~~~~~~~~~~~~~ 359 (416)
+ ...|.|++..|.|--.... -.+ .-.+.++.+.+.|+||-.+...+ -.....+.+.+.+.+
T Consensus 82 -~----~~aDvviiaVptp~~~~~~--~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 82 -V----AHGDVQFIAVGTPPDEDGS--ADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp -H----HHCSEEEECCCCCBCTTSS--BCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred -h----hcCCEEEEEeCCCcccCCC--ccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 1 2468888887776321111 111 12467788888999987765543 223344555555543
No 486
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=21.53 E-value=3.9e+02 Score=26.75 Aligned_cols=114 Identities=9% Similarity=-0.024 Sum_probs=61.7
Q ss_pred CeEEEEeccccHHHHHHHHh--CCCCeEEEEchHHHHHHHHHHhCCC--cEEEEEcChhhhhhhhhccCCCceeEEEEEC
Q 014919 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLELVTHCRDSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILVSIQC 307 (416)
Q Consensus 232 ~~vLDIGCG~G~~~~~lA~~--~p~~~~iGvD~~~~a~~~a~~~~l~--nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~f 307 (416)
..|-=||+| ..+..||.. ..+.++++.|......+.+.+.+.. ++.. ..+..++... -...|.|++..
T Consensus 5 ~kIgiIGlG--~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~-~~s~~e~v~~-----l~~aDvVil~V 76 (484)
T 4gwg_A 5 ADIALIGLA--VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVG-AQSLKEMVSK-----LKKPRRIILLV 76 (484)
T ss_dssp BSEEEECCS--HHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE-CSSHHHHHHT-----BCSSCEEEECS
T ss_pred CEEEEEChh--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceec-cCCHHHHHhh-----ccCCCEEEEec
Confidence 345566764 455555443 1256899999765555554444322 2222 2344444210 12468888876
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHhhccCCcEEEEEeC-cHHHHHHHHHHHHhCCCC
Q 014919 308 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 308 pdpw~k~~h~krRl~~~~~l~~i~r~LkpgG~l~l~tD-~~~~~~~~~~~~~~~~~~ 363 (416)
|++. .....++.+...|+||..++-.+- .......+.+.+.+.+..
T Consensus 77 p~~~----------~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~ 123 (484)
T 4gwg_A 77 KAGQ----------AVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGIL 123 (484)
T ss_dssp CSSH----------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CChH----------HHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccc
Confidence 6541 113677888899999876654332 222334455566666654
No 487
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=20.85 E-value=5.1e+02 Score=27.29 Aligned_cols=57 Identities=14% Similarity=0.113 Sum_probs=39.5
Q ss_pred CCeEEEEeccccHHHHHHHHhC----CC-CeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhh
Q 014919 231 QPLVVDIGSGNGLFLLGMARKR----KD-LNFLGLELVTHCRDSLQLSGITNGYFIATNATST 288 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~~----p~-~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l 288 (416)
.-.+||+=||.|.+..-+.+.. +. -.+.++|+...|.+..+.+ .++..+.+.|+.++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N-hp~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN-HPQTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH-CTTSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH-CCCCceecCcHHHh
Confidence 4579999999999988776542 11 2467899888887765443 34556667777554
No 488
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.79 E-value=4.1e+02 Score=24.15 Aligned_cols=110 Identities=20% Similarity=0.212 Sum_probs=61.4
Q ss_pred CCeEEEEeccccHHHHHHHHh--CCCCeEEEEchHHHHHHHHHHhCCCcEEEEEcChhhhhhhhhccCCCceeEEEEECC
Q 014919 231 QPLVVDIGSGNGLFLLGMARK--RKDLNFLGLELVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 308 (416)
Q Consensus 231 ~~~vLDIGCG~G~~~~~lA~~--~p~~~~iGvD~~~~a~~~a~~~~l~nv~f~~~Da~~l~~~~~~~~~~s~D~v~~~fp 308 (416)
..+|.=||+|. ....+|.. ..+.++++.|......+.+.+.+.. ....+..+. -...|.|++..|
T Consensus 7 ~~~I~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~---~~~~~~~e~--------~~~aDvvi~~vp 73 (303)
T 3g0o_A 7 DFHVGIVGLGS--MGMGAARSCLRAGLSTWGADLNPQACANLLAEGAC---GAAASAREF--------AGVVDALVILVV 73 (303)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS---EEESSSTTT--------TTTCSEEEECCS
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCc---cccCCHHHH--------HhcCCEEEEECC
Confidence 35677788764 44444432 1356899999876655555555542 123343332 134699988766
Q ss_pred CCCCCCcchhhhhhhHHHH---HHHHhhccCCcEEEEEe-CcHHHHHHHHHHHHhCCCC
Q 014919 309 NPDFNRPEHRWRMVQRSLV---EAVSDLLVHDGKVFLQS-DIEEVMLRMKQQFLEYGKG 363 (416)
Q Consensus 309 dpw~k~~h~krRl~~~~~l---~~i~r~LkpgG~l~l~t-D~~~~~~~~~~~~~~~~~~ 363 (416)
++. + .+..+ +.+...|+||..+.-.+ -.....+.+.+.+.+.+..
T Consensus 74 ~~~----~------~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 74 NAA----Q------VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp SHH----H------HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred CHH----H------HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 541 0 11333 45567788887765443 3344455566666665543
No 489
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=20.20 E-value=2.5e+02 Score=25.78 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=19.1
Q ss_pred CCcEEEEEcCCccchHHHHHHHHHHh--cCeEEEehH
Q 014919 6 EKPYAAIIGGGNLCNKAAALHFLASR--CDGLIFVGL 40 (416)
Q Consensus 6 ~~p~~~i~GGaKv~dki~~~~~l~~~--~d~~~~gG~ 40 (416)
+...++|+||+-. ..+...-.|.+. +. ||+.|+
T Consensus 36 ~~D~IVVLG~~~~-~Rl~~A~~L~~~g~~~-lIvSGG 70 (266)
T 3ca8_A 36 QADCVILAGNAVM-PTIDAACKIARDQQIP-LLISGG 70 (266)
T ss_dssp CCSEEEEESCCCH-HHHHHHHHHHHHHTCC-EEEECC
T ss_pred CCCEEEECCCCch-HHHHHHHHHHHcCCCc-EEEECC
Confidence 4567899999853 344444444443 55 555554
Done!