Query 014922
Match_columns 416
No_of_seqs 219 out of 1949
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 03:31:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1sez_A Protoporphyrinogen oxid 100.0 1.2E-43 4E-48 352.1 25.8 401 2-415 77-498 (504)
2 3nks_A Protoporphyrinogen oxid 100.0 3.3E-42 1.1E-46 339.4 30.9 386 2-409 72-473 (477)
3 3lov_A Protoporphyrinogen oxid 100.0 9.3E-42 3.2E-46 335.9 31.3 387 2-413 70-468 (475)
4 3i6d_A Protoporphyrinogen oxid 100.0 5.7E-42 1.9E-46 337.0 28.2 385 2-410 75-468 (470)
5 2ivd_A PPO, PPOX, protoporphyr 100.0 2.5E-40 8.5E-45 326.0 33.7 391 2-414 80-477 (478)
6 4dsg_A UDP-galactopyranose mut 100.0 1.7E-33 5.7E-38 276.4 22.1 365 2-407 75-452 (484)
7 1s3e_A Amine oxidase [flavin-c 100.0 1.2E-31 4.1E-36 266.6 28.3 366 2-412 69-456 (520)
8 3ka7_A Oxidoreductase; structu 100.0 1.6E-31 5.5E-36 259.1 25.9 336 2-407 66-424 (425)
9 4gde_A UDP-galactopyranose mut 100.0 1.1E-31 3.9E-36 266.5 22.1 372 2-409 76-478 (513)
10 3nrn_A Uncharacterized protein 100.0 1.2E-29 4.1E-34 245.6 27.2 332 2-412 66-407 (421)
11 2yg5_A Putrescine oxidase; oxi 100.0 3E-30 1E-34 252.3 18.0 296 68-411 143-452 (453)
12 2vvm_A Monoamine oxidase N; FA 100.0 1.7E-26 5.9E-31 228.1 29.7 350 1-413 102-488 (495)
13 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 6.2E-27 2.1E-31 220.2 17.0 232 154-409 103-341 (342)
14 1b37_A Protein (polyamine oxid 99.9 7.2E-27 2.5E-31 229.3 15.8 299 68-415 135-463 (472)
15 2z3y_A Lysine-specific histone 99.9 6.1E-26 2.1E-30 230.7 18.3 238 154-412 392-660 (662)
16 2xag_A Lysine-specific histone 99.9 5.7E-26 1.9E-30 233.8 15.2 240 154-414 563-833 (852)
17 2jae_A L-amino acid oxidase; o 99.9 4.3E-25 1.5E-29 217.8 17.4 245 153-413 229-488 (489)
18 2iid_A L-amino-acid oxidase; f 99.9 1.2E-23 4E-28 208.0 24.6 239 154-411 232-485 (498)
19 4gut_A Lysine-specific histone 99.9 1.8E-23 6E-28 214.1 14.3 236 154-408 525-775 (776)
20 1rsg_A FMS1 protein; FAD bindi 99.9 3.2E-22 1.1E-26 198.4 16.2 242 156-413 196-510 (516)
21 3k7m_X 6-hydroxy-L-nicotine ox 99.9 8.5E-21 2.9E-25 184.0 21.2 274 71-409 141-425 (431)
22 1v0j_A UDP-galactopyranose mut 99.9 1.7E-22 5.7E-27 193.5 6.7 303 1-410 74-387 (399)
23 2bi7_A UDP-galactopyranose mut 99.8 6.5E-21 2.2E-25 181.4 14.5 293 2-412 70-372 (384)
24 1i8t_A UDP-galactopyranose mut 99.8 4.4E-21 1.5E-25 181.5 11.1 297 2-408 66-365 (367)
25 4dgk_A Phytoene dehydrogenase; 99.8 9.3E-20 3.2E-24 180.1 19.8 245 155-413 213-494 (501)
26 2b9w_A Putative aminooxidase; 99.8 5.8E-20 2E-24 177.8 17.0 278 68-407 140-423 (424)
27 3ayj_A Pro-enzyme of L-phenyla 99.8 2.3E-20 7.9E-25 187.2 13.0 251 153-413 337-682 (721)
28 1yvv_A Amine oxidase, flavin-c 99.8 6.5E-19 2.2E-23 164.8 18.3 227 155-411 102-328 (336)
29 3hdq_A UDP-galactopyranose mut 99.8 4.4E-19 1.5E-23 167.9 10.4 294 2-412 95-393 (397)
30 1d5t_A Guanine nucleotide diss 99.4 1.7E-12 5.7E-17 125.4 16.9 322 2-407 90-427 (433)
31 2bcg_G Secretory pathway GDP d 99.4 5.1E-12 1.7E-16 122.8 18.3 319 2-407 98-438 (453)
32 1vg0_A RAB proteins geranylger 99.3 7.2E-11 2.5E-15 117.2 18.1 254 2-306 240-507 (650)
33 3p1w_A Rabgdi protein; GDI RAB 99.3 7.7E-12 2.6E-16 120.6 9.2 187 1-218 102-312 (475)
34 2e1m_C L-glutamate oxidase; L- 99.1 3.9E-11 1.3E-15 100.8 4.8 111 297-412 33-154 (181)
35 2e1m_B L-glutamate oxidase; L- 98.2 1.5E-06 5.3E-11 67.7 5.4 103 206-336 5-110 (130)
36 2e1m_A L-glutamate oxidase; L- 97.7 5.3E-05 1.8E-09 70.9 7.7 61 152-216 309-369 (376)
37 3kkj_A Amine oxidase, flavin-c 97.6 6.4E-05 2.2E-09 66.8 6.4 88 316-413 243-330 (336)
38 3ihg_A RDME; flavoenzyme, anth 96.4 0.087 3E-06 51.7 15.9 53 172-225 132-189 (535)
39 3oz2_A Digeranylgeranylglycero 95.5 0.2 6.7E-06 46.6 13.3 64 160-224 102-167 (397)
40 3nyc_A D-arginine dehydrogenas 94.6 0.045 1.5E-06 50.9 5.9 53 163-220 154-209 (381)
41 3dje_A Fructosyl amine: oxygen 93.6 0.11 3.6E-06 49.5 6.5 53 163-219 161-220 (438)
42 3ps9_A TRNA 5-methylaminomethy 93.4 0.11 3.6E-06 52.7 6.5 53 163-219 417-472 (676)
43 3dme_A Conserved exported prot 93.2 0.16 5.5E-06 46.7 7.0 55 163-219 150-208 (369)
44 3pvc_A TRNA 5-methylaminomethy 93.1 0.12 4.1E-06 52.4 6.4 62 155-219 401-468 (689)
45 2uzz_A N-methyl-L-tryptophan o 93.0 0.15 5.1E-06 47.2 6.4 51 164-219 150-203 (372)
46 3v76_A Flavoprotein; structura 92.7 0.15 5.1E-06 48.2 6.0 56 159-219 128-186 (417)
47 2oln_A NIKD protein; flavoprot 92.2 0.18 6.2E-06 47.1 5.8 51 164-219 154-207 (397)
48 1y56_B Sarcosine oxidase; dehy 92.0 0.26 8.8E-06 45.7 6.6 52 163-219 149-204 (382)
49 2gf3_A MSOX, monomeric sarcosi 91.9 0.23 7.8E-06 46.1 6.2 53 163-220 150-205 (389)
50 4hb9_A Similarities with proba 91.8 0.25 8.5E-06 46.2 6.4 58 164-224 113-171 (412)
51 4at0_A 3-ketosteroid-delta4-5a 91.7 0.26 9E-06 47.9 6.6 58 161-218 200-262 (510)
52 2qa2_A CABE, polyketide oxygen 91.6 0.35 1.2E-05 46.9 7.4 63 162-225 109-172 (499)
53 1ryi_A Glycine oxidase; flavop 91.4 0.21 7.1E-06 46.3 5.3 52 163-219 164-218 (382)
54 2i0z_A NAD(FAD)-utilizing dehy 91.2 0.35 1.2E-05 46.2 6.7 55 162-219 133-190 (447)
55 2qa1_A PGAE, polyketide oxygen 91.1 0.35 1.2E-05 46.9 6.6 63 162-225 108-171 (500)
56 2gag_B Heterotetrameric sarcos 91.0 0.3 1E-05 45.6 6.0 52 164-219 175-229 (405)
57 4a9w_A Monooxygenase; baeyer-v 90.6 0.38 1.3E-05 43.8 6.3 54 161-219 77-131 (357)
58 2ywl_A Thioredoxin reductase r 90.5 0.5 1.7E-05 38.4 6.3 49 164-218 57-108 (180)
59 2gqf_A Hypothetical protein HI 90.4 0.46 1.6E-05 44.6 6.6 53 162-219 108-167 (401)
60 3nlc_A Uncharacterized protein 90.2 0.5 1.7E-05 46.3 6.8 55 163-220 220-277 (549)
61 3lad_A Dihydrolipoamide dehydr 90.1 0.67 2.3E-05 44.5 7.7 46 172-218 233-278 (476)
62 3fmw_A Oxygenase; mithramycin, 90.1 0.38 1.3E-05 47.5 6.0 53 172-225 160-213 (570)
63 2vou_A 2,6-dihydroxypyridine h 89.8 0.57 2E-05 43.7 6.8 59 162-224 98-158 (397)
64 1xdi_A RV3303C-LPDA; reductase 89.5 0.69 2.3E-05 44.8 7.2 50 165-218 228-277 (499)
65 3lxd_A FAD-dependent pyridine 89.4 0.72 2.5E-05 43.4 7.2 51 164-218 198-249 (415)
66 3nix_A Flavoprotein/dehydrogen 89.4 0.59 2E-05 43.9 6.6 53 172-225 118-172 (421)
67 2x3n_A Probable FAD-dependent 89.0 0.61 2.1E-05 43.5 6.3 58 164-225 108-172 (399)
68 3o0h_A Glutathione reductase; 89.0 0.81 2.8E-05 44.1 7.3 43 172-218 244-286 (484)
69 3d1c_A Flavin-containing putat 88.9 0.6 2E-05 42.9 6.1 50 165-219 93-142 (369)
70 3fg2_P Putative rubredoxin red 88.6 0.79 2.7E-05 42.9 6.8 49 167-218 191-239 (404)
71 2xdo_A TETX2 protein; tetracyc 88.5 0.67 2.3E-05 43.3 6.2 52 164-219 129-181 (398)
72 3rp8_A Flavoprotein monooxygen 88.3 0.75 2.6E-05 43.0 6.4 51 164-218 128-179 (407)
73 3iwa_A FAD-dependent pyridine 88.1 0.85 2.9E-05 43.7 6.8 46 169-218 211-256 (472)
74 2gv8_A Monooxygenase; FMO, FAD 88.1 0.78 2.7E-05 43.6 6.5 54 164-218 119-175 (447)
75 1d4d_A Flavocytochrome C fumar 87.8 1.1 3.9E-05 44.1 7.6 55 164-218 256-315 (572)
76 3cgv_A Geranylgeranyl reductas 87.8 0.81 2.8E-05 42.4 6.3 51 173-224 115-167 (397)
77 3oc4_A Oxidoreductase, pyridin 87.3 1 3.4E-05 42.9 6.7 44 171-219 200-243 (452)
78 2v3a_A Rubredoxin reductase; a 87.2 0.96 3.3E-05 42.0 6.3 50 165-218 189-241 (384)
79 3axb_A Putative oxidoreductase 87.1 0.67 2.3E-05 44.0 5.4 52 164-219 182-253 (448)
80 1y0p_A Fumarate reductase flav 87.1 1.2 4.1E-05 43.9 7.3 56 163-218 255-315 (571)
81 1pj5_A N,N-dimethylglycine oxi 87.0 0.8 2.8E-05 47.4 6.2 52 164-220 152-207 (830)
82 3ef6_A Toluene 1,2-dioxygenase 86.8 1.2 4.1E-05 41.8 6.9 48 167-218 192-239 (410)
83 1qo8_A Flavocytochrome C3 fuma 86.6 1.2 4.1E-05 43.8 7.0 56 163-218 250-310 (566)
84 3r9u_A Thioredoxin reductase; 86.5 1.2 4.2E-05 39.6 6.5 55 164-218 187-242 (315)
85 2qae_A Lipoamide, dihydrolipoy 86.4 1.7 5.8E-05 41.6 7.8 47 171-218 227-274 (468)
86 1fec_A Trypanothione reductase 86.2 1.5 5E-05 42.3 7.3 44 172-218 243-286 (490)
87 2yqu_A 2-oxoglutarate dehydrog 85.9 1.3 4.5E-05 42.1 6.8 42 173-218 221-262 (455)
88 2wpf_A Trypanothione reductase 85.7 1.7 5.7E-05 42.0 7.4 44 172-218 247-290 (495)
89 1ges_A Glutathione reductase; 85.1 1.9 6.3E-05 41.1 7.3 44 172-218 220-263 (450)
90 1m6i_A Programmed cell death p 85.0 1.3 4.6E-05 42.7 6.3 44 171-218 237-280 (493)
91 3gwf_A Cyclohexanone monooxyge 85.0 1.2 4.3E-05 43.5 6.1 54 162-218 89-145 (540)
92 2a8x_A Dihydrolipoyl dehydroge 85.0 2.5 8.6E-05 40.3 8.2 47 170-218 222-269 (464)
93 3da1_A Glycerol-3-phosphate de 84.9 1.5 5E-05 43.2 6.6 58 163-220 170-232 (561)
94 3fpz_A Thiazole biosynthetic e 84.8 0.45 1.5E-05 43.2 2.7 37 376-412 282-326 (326)
95 3e1t_A Halogenase; flavoprotei 84.7 1.7 5.9E-05 42.1 7.0 46 173-219 124-171 (512)
96 1trb_A Thioredoxin reductase; 83.8 3.3 0.00011 36.9 8.1 54 165-218 186-245 (320)
97 2xve_A Flavin-containing monoo 83.7 2 6.8E-05 41.1 6.8 52 167-218 108-164 (464)
98 3c4n_A Uncharacterized protein 83.6 0.7 2.4E-05 43.3 3.6 51 164-219 173-235 (405)
99 3itj_A Thioredoxin reductase 1 83.4 2.2 7.6E-05 38.3 6.8 56 163-218 212-269 (338)
100 1mo9_A ORF3; nucleotide bindin 83.3 2.2 7.4E-05 41.5 7.1 45 172-218 267-314 (523)
101 1zmd_A Dihydrolipoyl dehydroge 83.2 3.1 0.00011 39.7 8.1 48 170-218 230-280 (474)
102 2rgh_A Alpha-glycerophosphate 83.2 1.9 6.4E-05 42.5 6.6 57 164-220 189-250 (571)
103 3s5w_A L-ornithine 5-monooxyge 83.2 0.94 3.2E-05 43.2 4.3 59 160-218 127-190 (463)
104 4ap3_A Steroid monooxygenase; 83.1 1.9 6.4E-05 42.3 6.4 54 162-218 101-157 (549)
105 3ab1_A Ferredoxin--NADP reduct 83.0 2.2 7.6E-05 38.9 6.7 52 164-218 75-129 (360)
106 1q1r_A Putidaredoxin reductase 82.9 2.8 9.7E-05 39.5 7.5 44 171-218 202-248 (431)
107 2zbw_A Thioredoxin reductase; 82.9 1.8 6.2E-05 39.0 6.0 51 164-218 66-119 (335)
108 4a5l_A Thioredoxin reductase; 82.9 1.2 4.2E-05 39.7 4.8 38 376-413 275-314 (314)
109 3c96_A Flavin-containing monoo 82.8 2.5 8.5E-05 39.5 7.0 58 166-225 114-175 (410)
110 2eq6_A Pyruvate dehydrogenase 82.5 2.8 9.4E-05 40.0 7.3 46 172-218 222-269 (464)
111 3s5w_A L-ornithine 5-monooxyge 82.4 2.2 7.6E-05 40.5 6.6 44 174-218 330-375 (463)
112 1k0i_A P-hydroxybenzoate hydro 82.3 2.3 7.8E-05 39.4 6.6 51 174-225 117-169 (394)
113 3atr_A Conserved archaeal prot 82.3 2.7 9.3E-05 39.9 7.2 60 165-225 102-168 (453)
114 3lzw_A Ferredoxin--NADP reduct 82.3 1.6 5.4E-05 39.2 5.3 52 163-218 67-121 (332)
115 1ebd_A E3BD, dihydrolipoamide 82.2 2.4 8.3E-05 40.2 6.8 46 172-219 223-269 (455)
116 1dxl_A Dihydrolipoamide dehydr 82.0 2.6 8.8E-05 40.2 6.9 47 172-219 230-278 (470)
117 3l8k_A Dihydrolipoyl dehydroge 81.9 2.2 7.6E-05 40.7 6.4 55 163-218 214-270 (466)
118 4dna_A Probable glutathione re 81.8 2.6 8.9E-05 40.2 6.9 45 171-218 222-266 (463)
119 1onf_A GR, grase, glutathione 81.7 3 0.0001 40.2 7.3 43 173-218 230-273 (500)
120 3i3l_A Alkylhalidase CMLS; fla 81.2 2.9 9.8E-05 41.4 7.0 47 172-219 140-187 (591)
121 2hqm_A GR, grase, glutathione 80.9 2.9 9.8E-05 40.1 6.8 46 171-218 237-283 (479)
122 2r9z_A Glutathione amide reduc 80.8 2.7 9.1E-05 40.1 6.5 44 172-218 219-262 (463)
123 2cdu_A NADPH oxidase; flavoenz 80.7 2.9 9.8E-05 39.7 6.7 46 169-219 200-246 (452)
124 2e4g_A Tryptophan halogenase; 80.4 3.6 0.00012 40.2 7.5 44 172-219 206-251 (550)
125 3ic9_A Dihydrolipoamide dehydr 80.3 4 0.00014 39.3 7.6 53 165-218 217-272 (492)
126 2r0c_A REBC; flavin adenine di 80.2 3.4 0.00012 40.4 7.2 60 165-225 140-202 (549)
127 2qcu_A Aerobic glycerol-3-phos 80.1 3.4 0.00012 39.9 7.0 56 164-220 150-210 (501)
128 3urh_A Dihydrolipoyl dehydroge 79.9 3.7 0.00013 39.4 7.3 46 172-218 251-298 (491)
129 2cul_A Glucose-inhibited divis 79.6 2.5 8.5E-05 36.0 5.3 34 376-410 197-231 (232)
130 3klj_A NAD(FAD)-dependent dehy 79.0 2.5 8.4E-05 39.3 5.5 42 171-218 73-114 (385)
131 1w4x_A Phenylacetone monooxyge 78.8 3.2 0.00011 40.5 6.5 54 162-218 96-152 (542)
132 1v59_A Dihydrolipoamide dehydr 78.5 3.6 0.00012 39.4 6.6 46 171-218 235-285 (478)
133 3uox_A Otemo; baeyer-villiger 78.4 2.6 8.9E-05 41.2 5.7 54 162-218 89-145 (545)
134 1zk7_A HGII, reductase, mercur 78.4 3.2 0.00011 39.6 6.2 49 165-218 218-269 (467)
135 2weu_A Tryptophan 5-halogenase 78.2 4.8 0.00016 38.8 7.5 51 165-219 175-229 (511)
136 3dgh_A TRXR-1, thioredoxin red 77.3 6.2 0.00021 37.7 7.9 46 173-218 240-287 (483)
137 3ntd_A FAD-dependent pyridine 76.8 4.4 0.00015 39.6 6.9 49 166-218 198-265 (565)
138 1rp0_A ARA6, thiazole biosynth 76.4 4 0.00014 35.9 5.9 54 164-218 120-189 (284)
139 1ojt_A Surface protein; redox- 76.1 3.1 0.00011 39.9 5.4 44 173-218 239-284 (482)
140 2q0l_A TRXR, thioredoxin reduc 75.9 4.2 0.00014 36.0 6.0 53 165-218 184-239 (311)
141 3dk9_A Grase, GR, glutathione 75.6 7.2 0.00025 37.2 7.9 48 171-218 239-291 (478)
142 1fl2_A Alkyl hydroperoxide red 75.5 5.8 0.0002 35.1 6.8 53 165-218 185-240 (310)
143 2bry_A NEDD9 interacting prote 75.4 3.5 0.00012 39.8 5.6 56 164-219 167-229 (497)
144 1fl2_A Alkyl hydroperoxide red 75.1 4.2 0.00014 36.0 5.8 38 376-413 268-307 (310)
145 2pyx_A Tryptophan halogenase; 75.0 6.1 0.00021 38.3 7.2 44 173-219 189-232 (526)
146 3dgz_A Thioredoxin reductase 2 74.9 7.8 0.00027 37.1 7.9 46 173-218 238-285 (488)
147 4b63_A L-ornithine N5 monooxyg 74.6 6.1 0.00021 38.1 7.1 57 162-218 147-212 (501)
148 1coy_A Cholesterol oxidase; ox 74.5 5.2 0.00018 38.6 6.6 50 175-224 242-297 (507)
149 2wdq_A Succinate dehydrogenase 74.3 6.5 0.00022 38.8 7.3 57 163-219 143-205 (588)
150 2aqj_A Tryptophan halogenase, 74.2 6.2 0.00021 38.3 7.1 43 173-219 178-221 (538)
151 2h88_A Succinate dehydrogenase 74.0 5.2 0.00018 39.8 6.5 57 163-219 155-216 (621)
152 3vrd_B FCCB subunit, flavocyto 73.7 1.3 4.3E-05 41.3 1.9 41 174-218 216-256 (401)
153 3f8d_A Thioredoxin reductase ( 73.5 5.1 0.00017 35.5 5.9 51 164-219 71-124 (323)
154 3ics_A Coenzyme A-disulfide re 73.2 4.8 0.00017 39.6 6.1 42 171-218 239-280 (588)
155 1n4w_A CHOD, cholesterol oxida 72.9 6 0.00021 38.1 6.6 50 175-224 237-292 (504)
156 2dkh_A 3-hydroxybenzoate hydro 72.8 6 0.00021 39.4 6.7 54 172-225 153-217 (639)
157 3itj_A Thioredoxin reductase 1 72.7 5.5 0.00019 35.6 6.0 37 376-412 298-336 (338)
158 2gqw_A Ferredoxin reductase; f 72.7 6.7 0.00023 36.6 6.7 44 167-218 194-237 (408)
159 1y56_A Hypothetical protein PH 72.5 5.7 0.0002 38.2 6.3 60 155-219 253-312 (493)
160 2bs2_A Quinol-fumarate reducta 72.2 8 0.00027 38.7 7.4 56 164-219 159-219 (660)
161 2q7v_A Thioredoxin reductase; 72.2 6.6 0.00023 35.0 6.4 54 164-218 192-247 (325)
162 3f8d_A Thioredoxin reductase ( 72.2 5.4 0.00018 35.4 5.7 54 164-218 194-249 (323)
163 2e5v_A L-aspartate oxidase; ar 72.1 3.9 0.00013 39.1 5.0 53 164-219 120-175 (472)
164 1vdc_A NTR, NADPH dependent th 72.0 7.6 0.00026 34.7 6.8 53 165-218 200-257 (333)
165 3ab1_A Ferredoxin--NADP reduct 71.2 7 0.00024 35.5 6.3 45 174-218 216-261 (360)
166 2gmh_A Electron transfer flavo 71.1 10 0.00036 37.3 7.9 34 378-411 347-386 (584)
167 2cul_A Glucose-inhibited divis 70.8 3.5 0.00012 35.0 4.0 42 174-219 83-124 (232)
168 4g6h_A Rotenone-insensitive NA 70.5 9.4 0.00032 36.8 7.3 53 162-217 274-329 (502)
169 2q0l_A TRXR, thioredoxin reduc 70.0 6.2 0.00021 34.9 5.6 50 164-218 60-112 (311)
170 3cty_A Thioredoxin reductase; 69.5 12 0.00041 33.2 7.4 53 165-218 196-250 (319)
171 2a87_A TRXR, TR, thioredoxin r 69.4 6.9 0.00024 35.1 5.8 53 165-218 196-250 (335)
172 4gcm_A TRXR, thioredoxin reduc 68.1 4.5 0.00015 35.9 4.2 41 372-413 266-308 (312)
173 1vdc_A NTR, NADPH dependent th 68.1 7.8 0.00027 34.6 5.9 50 164-219 71-123 (333)
174 2ywl_A Thioredoxin reductase r 68.0 6 0.00021 31.7 4.7 39 376-414 134-174 (180)
175 4b1b_A TRXR, thioredoxin reduc 67.8 8.9 0.0003 37.4 6.5 49 165-217 265-316 (542)
176 3alj_A 2-methyl-3-hydroxypyrid 67.8 9.1 0.00031 35.1 6.4 46 173-225 120-166 (379)
177 2i0z_A NAD(FAD)-utilizing dehy 67.5 3.7 0.00013 38.9 3.7 36 376-411 403-444 (447)
178 3hyw_A Sulfide-quinone reducta 66.9 6.5 0.00022 36.9 5.3 50 164-218 204-254 (430)
179 3ntd_A FAD-dependent pyridine 66.6 8.2 0.00028 37.7 6.1 51 166-218 64-115 (565)
180 4eqs_A Coenzyme A disulfide re 66.2 7.9 0.00027 36.5 5.7 51 167-218 64-114 (437)
181 3fbs_A Oxidoreductase; structu 66.0 6.2 0.00021 34.4 4.7 38 376-413 256-294 (297)
182 3fbs_A Oxidoreductase; structu 65.5 8.7 0.0003 33.5 5.6 52 163-218 56-110 (297)
183 1kf6_A Fumarate reductase flav 65.4 11 0.00037 37.3 6.7 57 163-219 134-196 (602)
184 3h8l_A NADH oxidase; membrane 64.6 7.7 0.00026 36.0 5.3 44 167-218 225-268 (409)
185 3lzw_A Ferredoxin--NADP reduct 64.3 11 0.00036 33.6 6.0 46 172-218 201-248 (332)
186 1chu_A Protein (L-aspartate ox 63.7 6.7 0.00023 38.2 4.8 55 165-219 144-207 (540)
187 2zxi_A TRNA uridine 5-carboxym 63.2 8.7 0.0003 38.1 5.4 52 164-219 124-179 (637)
188 3cgb_A Pyridine nucleotide-dis 62.9 12 0.00041 35.7 6.4 42 172-219 239-281 (480)
189 1nhp_A NADH peroxidase; oxidor 62.3 12 0.0004 35.3 6.1 42 172-218 203-244 (447)
190 3r9u_A Thioredoxin reductase; 62.2 7.4 0.00025 34.3 4.5 37 376-412 275-313 (315)
191 4fk1_A Putative thioredoxin re 61.5 3.5 0.00012 36.5 2.2 38 376-413 263-302 (304)
192 2jbv_A Choline oxidase; alcoho 61.3 10 0.00036 36.9 5.6 51 174-224 223-277 (546)
193 3qfa_A Thioredoxin reductase 1 61.2 15 0.00052 35.4 6.8 46 173-218 263-313 (519)
194 3cty_A Thioredoxin reductase; 60.9 8.5 0.00029 34.1 4.7 37 376-412 279-317 (319)
195 3k30_A Histamine dehydrogenase 60.5 15 0.0005 37.0 6.7 44 171-218 578-622 (690)
196 2a87_A TRXR, TR, thioredoxin r 60.5 13 0.00044 33.3 5.8 37 376-412 279-317 (335)
197 2zbw_A Thioredoxin reductase; 60.3 19 0.00066 32.0 7.0 54 165-219 193-251 (335)
198 3ics_A Coenzyme A-disulfide re 60.1 12 0.00043 36.6 6.0 51 166-218 99-150 (588)
199 1lvl_A Dihydrolipoamide dehydr 59.9 13 0.00045 35.1 6.0 42 172-218 224-266 (458)
200 3h28_A Sulfide-quinone reducta 59.8 11 0.00036 35.4 5.3 47 167-217 207-253 (430)
201 1hyu_A AHPF, alkyl hydroperoxi 59.4 12 0.00042 36.1 5.8 52 164-218 268-324 (521)
202 3sx6_A Sulfide-quinone reducta 59.1 22 0.00076 33.3 7.4 50 165-217 213-266 (437)
203 2bc0_A NADH oxidase; flavoprot 58.9 17 0.00059 34.7 6.7 41 172-218 248-289 (490)
204 1trb_A Thioredoxin reductase; 57.8 11 0.00036 33.5 4.7 37 376-412 277-315 (320)
205 3ces_A MNMG, tRNA uridine 5-ca 56.6 11 0.00036 37.6 4.7 51 165-219 126-180 (651)
206 2q7v_A Thioredoxin reductase; 56.5 11 0.00039 33.4 4.7 37 376-412 275-313 (325)
207 1q1r_A Putidaredoxin reductase 56.4 14 0.00047 34.7 5.4 42 171-218 71-112 (431)
208 2vdc_G Glutamate synthase [NAD 55.7 11 0.00039 35.7 4.7 37 376-412 408-445 (456)
209 3oc4_A Oxidoreductase, pyridin 55.4 13 0.00045 35.0 5.1 45 171-218 69-113 (452)
210 3d1c_A Flavin-containing putat 55.2 15 0.00052 33.2 5.4 41 175-218 230-270 (369)
211 3iwa_A FAD-dependent pyridine 55.0 12 0.00041 35.5 4.8 50 167-218 73-123 (472)
212 1jnr_A Adenylylsulfate reducta 54.6 31 0.0011 34.3 7.9 45 174-218 166-216 (643)
213 2gqf_A Hypothetical protein HI 53.3 8.6 0.00029 35.8 3.4 32 376-407 362-399 (401)
214 3gyx_A Adenylylsulfate reducta 52.7 27 0.00092 34.9 7.0 54 165-218 172-231 (662)
215 3t37_A Probable dehydrogenase; 52.6 12 0.00042 36.0 4.5 50 175-224 226-275 (526)
216 1kdg_A CDH, cellobiose dehydro 52.3 12 0.0004 36.5 4.3 60 165-224 201-265 (546)
217 3ef6_A Toluene 1,2-dioxygenase 52.0 16 0.00056 33.8 5.1 42 171-218 68-109 (410)
218 1xhc_A NADH oxidase /nitrite r 51.1 19 0.00066 32.8 5.4 41 171-218 71-111 (367)
219 3pl8_A Pyranose 2-oxidase; sub 49.9 20 0.00067 35.6 5.5 51 174-224 274-328 (623)
220 3cgb_A Pyridine nucleotide-dis 49.3 23 0.00077 33.7 5.7 50 167-218 100-150 (480)
221 3cp8_A TRNA uridine 5-carboxym 48.4 15 0.00051 36.5 4.3 35 376-410 377-411 (641)
222 4a9w_A Monooxygenase; baeyer-v 47.9 15 0.00052 32.8 4.1 37 376-412 313-353 (357)
223 2bc0_A NADH oxidase; flavoprot 47.2 21 0.0007 34.1 5.1 45 171-218 103-147 (490)
224 4fk1_A Putative thioredoxin re 46.9 34 0.0012 29.9 6.2 51 165-218 62-115 (304)
225 2cdu_A NADPH oxidase; flavoenz 45.8 27 0.00091 32.9 5.6 46 171-218 69-115 (452)
226 3nlc_A Uncharacterized protein 45.7 13 0.00044 36.2 3.4 38 376-413 507-545 (549)
227 3v76_A Flavoprotein; structura 45.7 9.5 0.00032 35.7 2.3 30 376-405 381-416 (417)
228 1ps9_A 2,4-dienoyl-COA reducta 45.4 30 0.001 34.6 6.1 47 167-219 580-627 (671)
229 2x8g_A Thioredoxin glutathione 45.4 45 0.0015 32.6 7.4 44 174-218 340-393 (598)
230 1xhc_A NADH oxidase /nitrite r 45.3 23 0.0008 32.3 4.9 40 170-218 193-232 (367)
231 3cp8_A TRNA uridine 5-carboxym 44.9 18 0.00063 35.8 4.3 41 174-219 132-173 (641)
232 3lxd_A FAD-dependent pyridine 44.9 22 0.00075 33.0 4.8 44 169-218 74-117 (415)
233 1nhp_A NADH peroxidase; oxidor 44.4 31 0.0011 32.3 5.8 45 172-218 68-113 (447)
234 1hyu_A AHPF, alkyl hydroperoxi 44.1 34 0.0012 32.9 6.2 43 174-217 405-450 (521)
235 3ces_A MNMG, tRNA uridine 5-ca 44.0 19 0.00066 35.7 4.3 40 371-410 378-417 (651)
236 4eqs_A Coenzyme A disulfide re 43.8 44 0.0015 31.3 6.7 46 165-218 193-238 (437)
237 2gqw_A Ferredoxin reductase; f 43.5 21 0.00073 33.1 4.4 40 173-218 72-111 (408)
238 1pn0_A Phenol 2-monooxygenase; 43.3 41 0.0014 33.5 6.7 33 378-410 351-389 (665)
239 3kd9_A Coenzyme A disulfide re 43.2 34 0.0011 32.1 5.8 45 169-218 68-112 (449)
240 3hyw_A Sulfide-quinone reducta 43.2 16 0.00056 34.1 3.6 38 376-413 285-335 (430)
241 1m6i_A Programmed cell death p 41.9 16 0.00056 34.9 3.4 40 173-218 103-142 (493)
242 3qvp_A Glucose oxidase; oxidor 41.1 31 0.001 33.9 5.2 50 175-224 242-297 (583)
243 2gjc_A Thiazole biosynthetic e 40.9 27 0.00093 31.4 4.5 35 377-411 283-325 (326)
244 2v3a_A Rubredoxin reductase; a 39.7 28 0.00095 31.8 4.6 45 167-218 67-111 (384)
245 3kd9_A Coenzyme A disulfide re 38.0 31 0.0011 32.3 4.7 39 175-218 204-242 (449)
246 1ju2_A HydroxynitrIle lyase; f 37.5 44 0.0015 32.3 5.7 52 173-224 207-265 (536)
247 1y56_A Hypothetical protein PH 37.4 41 0.0014 32.0 5.5 54 163-218 161-217 (493)
248 1o94_A Tmadh, trimethylamine d 36.6 49 0.0017 33.4 6.1 43 173-218 584-644 (729)
249 3h28_A Sulfide-quinone reducta 36.0 40 0.0014 31.3 5.1 38 376-413 285-335 (430)
250 2zxi_A TRNA uridine 5-carboxym 35.4 31 0.0011 34.2 4.3 40 371-410 383-422 (637)
251 3jsk_A Cypbp37 protein; octame 35.1 27 0.00093 31.6 3.5 37 377-413 293-337 (344)
252 3g5s_A Methylenetetrahydrofola 34.5 26 0.00089 32.7 3.3 40 371-410 322-361 (443)
253 3q9t_A Choline dehydrogenase a 34.5 38 0.0013 33.2 4.7 51 174-224 220-274 (577)
254 3sx6_A Sulfide-quinone reducta 32.9 46 0.0016 31.0 4.9 38 376-413 296-346 (437)
255 3fg2_P Putative rubredoxin red 32.8 52 0.0018 30.2 5.2 41 171-218 68-108 (404)
256 3fim_B ARYL-alcohol oxidase; A 32.6 39 0.0013 33.0 4.4 50 175-224 223-280 (566)
257 3vrd_B FCCB subunit, flavocyto 32.2 35 0.0012 31.2 4.0 37 376-412 285-325 (401)
258 3h8l_A NADH oxidase; membrane 31.7 44 0.0015 30.7 4.6 35 376-410 298-335 (409)
259 3lad_A Dihydrolipoamide dehydr 30.6 31 0.0011 32.6 3.4 37 372-409 306-343 (476)
260 1gpe_A Protein (glucose oxidas 30.3 34 0.0012 33.6 3.6 51 174-224 245-301 (587)
261 1cjc_A Protein (adrenodoxin re 28.2 33 0.0011 32.4 3.1 37 377-413 359-397 (460)
262 2gag_A Heterotetrameric sarcos 27.1 52 0.0018 34.5 4.5 37 376-412 409-445 (965)
263 3atr_A Conserved archaeal prot 26.3 63 0.0021 30.2 4.6 34 378-411 282-321 (453)
264 3k30_A Histamine dehydrogenase 26.3 23 0.0008 35.5 1.7 36 376-411 640-675 (690)
265 1chu_A Protein (L-aspartate ox 26.2 37 0.0013 32.9 3.0 35 376-410 366-410 (540)
266 3urh_A Dihydrolipoyl dehydroge 26.1 30 0.001 32.9 2.4 34 376-409 329-363 (491)
267 3ic9_A Dihydrolipoamide dehydr 26.1 51 0.0017 31.4 3.9 36 372-408 301-337 (492)
268 3l8k_A Dihydrolipoyl dehydroge 26.0 50 0.0017 31.1 3.9 37 372-409 296-333 (466)
269 1rp0_A ARA6, thiazole biosynth 25.8 44 0.0015 29.0 3.2 37 377-413 233-277 (284)
270 1qo8_A Flavocytochrome C3 fuma 25.5 29 0.001 33.8 2.2 36 376-411 520-564 (566)
271 2gag_A Heterotetrameric sarcos 25.4 82 0.0028 33.0 5.7 48 171-218 327-381 (965)
272 4dna_A Probable glutathione re 24.9 51 0.0017 31.0 3.7 34 376-409 297-331 (463)
273 1ebd_A E3BD, dihydrolipoamide 24.8 91 0.0031 29.1 5.4 33 376-408 299-332 (455)
274 1lqt_A FPRA; NADP+ derivative, 24.7 41 0.0014 31.7 2.9 36 377-412 351-388 (456)
275 1y0p_A Fumarate reductase flav 24.6 29 0.001 33.8 2.0 35 376-410 525-568 (571)
276 2a8x_A Dihydrolipoyl dehydroge 24.3 55 0.0019 30.7 3.8 33 376-408 300-333 (464)
277 1v59_A Dihydrolipoamide dehydr 24.3 59 0.002 30.6 4.1 33 376-408 316-349 (478)
278 3o0h_A Glutathione reductase; 23.8 56 0.0019 30.9 3.8 34 376-409 317-351 (484)
279 1gte_A Dihydropyrimidine dehyd 23.4 62 0.0021 34.2 4.3 36 376-411 472-508 (1025)
280 2gmh_A Electron transfer flavo 23.3 70 0.0024 31.3 4.4 56 164-219 145-216 (584)
281 3dk9_A Grase, GR, glutathione 22.3 63 0.0022 30.5 3.8 34 376-409 322-356 (478)
282 4at0_A 3-ketosteroid-delta4-5a 22.0 35 0.0012 32.7 1.9 32 376-407 467-507 (510)
283 1zmd_A Dihydrolipoyl dehydroge 21.8 57 0.0019 30.8 3.3 33 376-408 311-344 (474)
284 1dxl_A Dihydrolipoamide dehydr 21.5 1.3E+02 0.0044 28.1 5.8 33 376-408 308-341 (470)
285 1ges_A Glutathione reductase; 21.4 68 0.0023 30.0 3.8 33 376-408 294-327 (450)
286 2hqm_A GR, grase, glutathione 21.2 70 0.0024 30.2 3.9 33 376-408 313-346 (479)
287 1d4d_A Flavocytochrome C fumar 21.2 33 0.0011 33.5 1.5 35 376-410 526-569 (572)
288 2yqu_A 2-oxoglutarate dehydrog 20.3 80 0.0028 29.5 4.1 33 376-408 293-326 (455)
289 3jsk_A Cypbp37 protein; octame 20.3 1.2E+02 0.0042 27.2 5.1 27 164-190 161-191 (344)
290 2eq6_A Pyruvate dehydrogenase 20.2 65 0.0022 30.3 3.4 33 376-408 300-333 (464)
291 1fec_A Trypanothione reductase 20.2 73 0.0025 30.2 3.8 33 376-408 317-350 (490)
292 1ojt_A Surface protein; redox- 20.1 66 0.0022 30.4 3.4 33 376-408 315-348 (482)
No 1
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=1.2e-43 Score=352.06 Aligned_cols=401 Identities=28% Similarity=0.475 Sum_probs=305.0
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhHHHhhhcccCCCCC----CCCCCCcHHHHH
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRPP----PPGHEESVEEFV 77 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~~~~~~~~----~~~~~~s~~~~l 77 (416)
++++++||+.+++.+......++++.+|+.+++|.++..++...+++..++++.+...+..... ...+++|+++|+
T Consensus 77 ~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 156 (504)
T 1sez_A 77 TFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFF 156 (504)
T ss_dssp HHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHH
T ss_pred HHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHH
Confidence 5799999998877665443346778899999998764444444567777777765443211110 124679999999
Q ss_pred HHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCC-CCCCCcee
Q 014922 78 RRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLP-KPKGQTVG 156 (416)
Q Consensus 78 ~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 156 (416)
+++++++.++++++|++.++|+.+++++|+.++++.++.+++.+|+++.+++.................+. ......++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (504)
T 1sez_A 157 QRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSF 236 (504)
T ss_dssp HHHHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCB
T ss_pred HHHcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceE
Confidence 99999999999999999999999999999999999999888888888777765332111000000000000 00122468
Q ss_pred ehhhhHhHHHHHHHHHhc-cceecCceeeeEEEcCCCc-----eEEEEeCCCCc--eEEecCEEEEcCChHHHHhccC--
Q 014922 157 SFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKLDSGE-----YSLTYETPEGL--VSLRSRSVVMTVPSYVASSLLR-- 226 (416)
Q Consensus 157 ~~~gG~~~l~~~L~~~lg-~~I~l~~~V~~I~~~~~~~-----v~v~~~~~~g~--~~~~ad~VI~a~p~~~~~~ll~-- 226 (416)
+++||+++|+++|++.++ ++|++|++|++|+.++++. |.|++.+.+|. ++++||+||+|+|+..+.+++.
T Consensus 237 ~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~ 316 (504)
T 1sez_A 237 SFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAK 316 (504)
T ss_dssp EETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEES
T ss_pred eeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcc
Confidence 899999999999999997 7999999999999887753 67776544552 2689999999999999999872
Q ss_pred ---CCCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCC---CCceEEEEccCCCCCCCCCCCcE
Q 014922 227 ---PLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQ---GVETLGTIYSSSLFPNRAPAGRV 300 (416)
Q Consensus 227 ---~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~s~~~~~~~p~g~~ 300 (416)
+..+ ..+.++.+.++.+|++.|++++|+. +..++++++|..+ +..+.+++|.|..+|..+|+|..
T Consensus 317 ~~~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~------~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~ 387 (504)
T 1sez_A 317 RGNPFLL---NFIPEVDYVPLSVVITTFKRENVKY------PLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVY 387 (504)
T ss_dssp SSSBCCC---TTSCCCCEEEEEEEEEEEEGGGBSS------CCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEE
T ss_pred cCCcccH---HHHhcCCCCceEEEEEEEchhhcCC------CCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCE
Confidence 2222 2367788889999999999998864 3467788887544 23567788888888888888888
Q ss_pred EEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCE
Q 014922 301 LLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGL 380 (416)
Q Consensus 301 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l 380 (416)
++++|+++..+..+..++++++++.++++|++++|.. .+|..+.+++|.+++|+|.+|+......+..... +++||
T Consensus 388 ~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~--~~~~l 463 (504)
T 1sez_A 388 LYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAE--GEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEK--NLPGL 463 (504)
T ss_dssp EEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBC--SCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHH--HSTTE
T ss_pred EEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHH--hCCCE
Confidence 8999998877666778899999999999999999864 4688889999999999999999876665544433 57899
Q ss_pred EEeeccCCCCchhHHHHHHHHHHHHHHHHhhhccc
Q 014922 381 FLGGNYVAGVALGRCVESAYEVASEVSNFLSQYAY 415 (416)
Q Consensus 381 ~~aG~~~~g~~~~~ai~sg~~aA~~il~~l~~~~~ 415 (416)
||||+++.|.++++|+.||++||++|+..+.+...
T Consensus 464 ~~aG~~~~g~~v~gai~sG~~aA~~il~~l~~~~~ 498 (504)
T 1sez_A 464 FYAGNHRGGLSVGKALSSGCNAADLVISYLESVST 498 (504)
T ss_dssp EECCSSSSCSSHHHHHHHHHHHHHHHHHHHSSCC-
T ss_pred EEEeecCCCCCHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999889999999999999999999877654
No 2
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=339.37 Aligned_cols=386 Identities=26% Similarity=0.380 Sum_probs=301.3
Q ss_pred hhHHHhcCCCCceeeCCCC----CCceEEECCeeeeCCCCCCCCcc-ccCCChhhHHHhhhcccCCCCCCCCCCCcHHHH
Q 014922 2 LKMVVDSGLKDDLVLGDPN----APRFVLWNGRLRPVPSSPTDLPI-FDLMSIGGKIRAGLGALGLRPPPPGHEESVEEF 76 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~----~~~~i~~~g~~~~~p~~~~~~~~-~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~~~~ 76 (416)
++|+++||+.+++++.... ..++++.+|+++++|.+...++. ...+......+.+... +.+....+++|+.+|
T Consensus 72 ~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~ 149 (477)
T 3nks_A 72 LLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLREL--TKPRGKEPDETVHSF 149 (477)
T ss_dssp HHHHHHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCSSHHHHTTT--TSCCCCSSCCBHHHH
T ss_pred HHHHHHcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhHHHHHHHHhh--hcCCCCCCCcCHHHH
Confidence 5899999999888765432 23688899999999986544322 1222222222322222 222334578999999
Q ss_pred HHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCC---CCCCCC
Q 014922 77 VRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRL---PKPKGQ 153 (416)
Q Consensus 77 l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 153 (416)
++++++++.++++++|++.++|+.+++++|+.++++.++.++..+++++++++...... +. .+..+ ....+.
T Consensus 150 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~---~~--~~~~~~~~~~~~~~ 224 (477)
T 3nks_A 150 AQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRT---PQ--PDSALIRQALAERW 224 (477)
T ss_dssp HHHHHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC--------C--CCCHHHHHHHHTTC
T ss_pred HHHhhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccc---cC--CchhhhhhhcccCc
Confidence 99999999999999999999999999999999999999988888999988775421000 00 00000 000123
Q ss_pred ceeehhhhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCH
Q 014922 154 TVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSV 230 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~ 230 (416)
.+++++||+++|+++|++.+ |++|++|++|++|+.++++.|.|+ ++++ +++||+||+|+|++.+.+|+++..+
T Consensus 225 ~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~--~~~~--~~~ad~vv~a~p~~~~~~ll~~~~~ 300 (477)
T 3nks_A 225 SQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVS--LRDS--SLEADHVISAIPASVLSELLPAEAA 300 (477)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEE--CSSC--EEEESEEEECSCHHHHHHHSCGGGH
T ss_pred cEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEE--ECCe--EEEcCEEEECCCHHHHHHhccccCH
Confidence 57899999999999999988 569999999999998766447775 4444 7899999999999999999987777
Q ss_pred HHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCC-CCCcEEEEEEecCC
Q 014922 231 DAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRA-PAGRVLLLNYIGGA 309 (416)
Q Consensus 231 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~-p~g~~~l~~~~~~~ 309 (416)
...+.+.++.|.++.+|++.|++++|+ ..++|+++|..++..+++++|++++|++.. |++..++++++++.
T Consensus 301 ~~~~~l~~~~~~~~~~v~l~~~~~~~~--------~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~ 372 (477)
T 3nks_A 301 PLARALSAITAVSVAVVNLQYQGAHLP--------VQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGS 372 (477)
T ss_dssp HHHHHHHTCCEEEEEEEEEEETTCCCS--------SCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHH
T ss_pred HHHHHHhcCCCCcEEEEEEEECCCCCC--------CCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCc
Confidence 788889999999999999999998884 346799998877788899999998888643 34778999999765
Q ss_pred CCCC----CCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeec
Q 014922 310 TNLG----ILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGN 385 (416)
Q Consensus 310 ~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~ 385 (416)
+... ...++++++++.++++|.+++|.. .+|..+.+++|++++|+|.+|+...+..++..+.. ..++|++||+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~--~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~-~~~~l~l~G~ 449 (477)
T 3nks_A 373 WLQTLEASGCVLSQELFQQRAQEAAATQLGLK--EMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTA-HRLPLTLAGA 449 (477)
T ss_dssp HHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-TTCSEEECST
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHh-cCCCEEEEcc
Confidence 3221 235689999999999999999864 57889999999999999999999988888777765 3478999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHH
Q 014922 386 YVAGVALGRCVESAYEVASEVSNF 409 (416)
Q Consensus 386 ~~~g~~~~~ai~sg~~aA~~il~~ 409 (416)
|+.|.++++|+.||++||++|+..
T Consensus 450 ~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 450 SYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999864
No 3
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=9.3e-42 Score=335.89 Aligned_cols=387 Identities=24% Similarity=0.359 Sum_probs=305.1
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCC--------CCCccccCCChhhHHHhhhcccCCCC---CCCCCC
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSP--------TDLPIFDLMSIGGKIRAGLGALGLRP---PPPGHE 70 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~--------~~~~~~~~l~~~~~lr~~~~~~~~~~---~~~~~~ 70 (416)
++|+++||+.++++... ...++++.+|+++.+|... ..++...+++..+++ .+.+.+.... ....++
T Consensus 70 ~~l~~~lg~~~~~~~~~-~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 147 (475)
T 3lov_A 70 TDLIEAIGLGEKLVRNN-TSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ-EVADLLLHPSDSLRIPEQD 147 (475)
T ss_dssp HHHHHHTTCGGGEEECC-CCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH-HHHHHHHSCCTTCCCCSSC
T ss_pred HHHHHHcCCcceEeecC-CCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH-HhhCcccCCcccccCCCCC
Confidence 58999999998887542 2457889999999998642 122334567766665 3333221111 113578
Q ss_pred CcHHHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCC
Q 014922 71 ESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKP 150 (416)
Q Consensus 71 ~s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (416)
+|+.+|++++++++.++.+++|++.++|+.+++++|+.++++.+..++..+++++.++.... ..+....+..+...
T Consensus 148 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~ 223 (475)
T 3lov_A 148 IPLGEYLRPRLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMR----PLDQLPQTPQTTIK 223 (475)
T ss_dssp CBHHHHHHHHHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTC----C-------------
T ss_pred cCHHHHHHHHhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhc----cccccccccccccc
Confidence 99999999999999999999999999999999999999999999988888888877654310 00000000000000
Q ss_pred CCCceeehhhhHhHHHHHHHHHhc-cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCC
Q 014922 151 KGQTVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLS 229 (416)
Q Consensus 151 ~~~~~~~~~gG~~~l~~~L~~~lg-~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~ 229 (416)
.+..+++++||+++|+++|++.++ ++|++|++|++|+.++++ |+|+ +.+| +++||+||+|+|++.+.+++.+.+
T Consensus 224 ~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-~~v~--~~~g--~~~ad~vV~a~p~~~~~~ll~~~~ 298 (475)
T 3lov_A 224 ATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGR-YRLK--TDHG--PEYADYVLLTIPHPQVVQLLPDAH 298 (475)
T ss_dssp -CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTE-EEEE--CTTC--CEEESEEEECSCHHHHHHHCTTSC
T ss_pred CCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCE-EEEE--ECCC--eEECCEEEECCCHHHHHHHcCccC
Confidence 134578999999999999999997 699999999999998886 8886 5677 689999999999999999976542
Q ss_pred HHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCC
Q 014922 230 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGA 309 (416)
Q Consensus 230 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~ 309 (416)
. +.+.++.|.++.+|++.|++++ .. +..+++++++..++..+.+++|+++.|+...|+ ..++++++++.
T Consensus 299 ~---~~~~~~~~~~~~~v~l~~~~~~-~~------~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~ 367 (475)
T 3lov_A 299 L---PELEQLTTHSTATVTMIFDQQQ-SL------PIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRP 367 (475)
T ss_dssp C---HHHHTCCEEEEEEEEEEEECCS-SC------SSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBT
T ss_pred H---HHHhcCCCCeEEEEEEEECCcC-CC------CCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCC
Confidence 2 6778899999999999999987 21 456788888877777888899999889888887 77888899776
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCCC
Q 014922 310 TNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAG 389 (416)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~g 389 (416)
.+..+..++++++++.++++|.+++|.. .+|....+++|.+++|+|.+|+......+++.+.+ +.++|||||+++.+
T Consensus 368 ~~~~~~~~~~e~~~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~-~~~~l~~aG~~~~g 444 (475)
T 3lov_A 368 GNDHLVHESDEVLQQAVLQDLEKICGRT--LEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLA-QYPGIYLAGLAYDG 444 (475)
T ss_dssp TBCGGGGSCHHHHHHHHHHHHHHHHSSC--CCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHH-HSTTEEECSTTTSC
T ss_pred CCCcccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHh-hCCCEEEEccCCCC
Confidence 6666778899999999999999999864 47889999999999999999998887777777766 67899999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhhhc
Q 014922 390 VALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 390 ~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.|+++|+.||+++|++|+..++..
T Consensus 445 ~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 445 VGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp SSHHHHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999887653
No 4
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=5.7e-42 Score=336.97 Aligned_cols=385 Identities=30% Similarity=0.508 Sum_probs=291.6
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCC--------CCCccccCCChhhHHHhhhcccCCCCCCCCCCCcH
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSP--------TDLPIFDLMSIGGKIRAGLGALGLRPPPPGHEESV 73 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~--------~~~~~~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~ 73 (416)
++|++++|+.+++... .....+++.+|+++.+|.+. ..++..++++..++++.+...+. ......+++|+
T Consensus 75 ~~l~~~lgl~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~ 152 (470)
T 3i6d_A 75 PQLVKDLGLEHLLVNN-ATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFIL-PASKTKDDQSL 152 (470)
T ss_dssp HHHHHHTTCCTTEEEC-CCCCEEEECSSCEEECCC---------------------CCSHHHHHHHHS-CCCSSSSCCBH
T ss_pred HHHHHHcCCcceeecC-CCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCccc-CCCCCCCCcCH
Confidence 5899999999988743 22457888999999988642 22333445555556665554432 12234688999
Q ss_pred HHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCC
Q 014922 74 EEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQ 153 (416)
Q Consensus 74 ~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (416)
.+|++++++.+..+.++.|++.++|+.+++++|+.++++.+..++..++++..++........ ..+.....+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 225 (470)
T 3i6d_A 153 GEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGS-------GQQLTAKKQG 225 (470)
T ss_dssp HHHHHHHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------------
T ss_pred HHHHHHhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccc-------cccccccCCc
Confidence 999999999999999999999999999999999999998887655566666555432110000 0000000123
Q ss_pred ceeehhhhHhHHHHHHHHHhc-cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHHH
Q 014922 154 TVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDA 232 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~lg-~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~ 232 (416)
.+++++||++.|+++|++.++ ++|+++++|++|+.++++ |+|+ +.+|+ +++||+||+|+|++.+.+++.+. ..
T Consensus 226 ~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-~~v~--~~~g~-~~~ad~vi~a~p~~~~~~l~~~~--~~ 299 (470)
T 3i6d_A 226 QFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSC-YSLE--LDNGV-TLDADSVIVTAPHKAAAGMLSEL--PA 299 (470)
T ss_dssp -EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSS-EEEE--ESSSC-EEEESEEEECSCHHHHHHHTTTS--TT
T ss_pred eEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCe-EEEE--ECCCC-EEECCEEEECCCHHHHHHHcCCc--hh
Confidence 578999999999999999997 699999999999998887 8887 45774 79999999999999999987654 24
Q ss_pred HhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCC
Q 014922 233 AGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNL 312 (416)
Q Consensus 233 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~ 312 (416)
.+.+.++.+.++.+|++.|++++|+. +..++++++|..+...+.+++|+++.|+...|+|..++++++++..+.
T Consensus 300 ~~~~~~~~~~~~~~v~l~~~~~~~~~------~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~ 373 (470)
T 3i6d_A 300 ISHLKNMHSTSVANVALGFPEGSVQM------EHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDE 373 (470)
T ss_dssp HHHHHTCEEEEEEEEEEEESSTTCCC------SSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCC
T ss_pred hHHHhcCCCCceEEEEEEECchhcCC------CCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCc
Confidence 56788899999999999999999864 346788888877777788889988888888888888899999877766
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCCCCch
Q 014922 313 GILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVAL 392 (416)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~g~~~ 392 (416)
.+..++++++++.++++|.+++|.. .+|....+++|++++|+|.+|+......+++.+.+ +.++||+||+++.|.|+
T Consensus 374 ~~~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~-~~~~l~~aG~~~~g~gv 450 (470)
T 3i6d_A 374 SIVDLSDNDIINIVLEDLKKVMNIN--GEPEMTCVTRWHESMPQYHVGHKQRIKELREALAS-AYPGVYMTGASFEGVGI 450 (470)
T ss_dssp GGGTSCHHHHHHHHHHHHGGGSCCC--SCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHH-HSTTEEECSTTTSCCSH
T ss_pred cccCCCHHHHHHHHHHHHHHHhCCC--CCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHh-hCCCEEEEeecCCCCCH
Confidence 6778899999999999999999863 47888999999999999999998887777777766 67899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 014922 393 GRCVESAYEVASEVSNFL 410 (416)
Q Consensus 393 ~~ai~sg~~aA~~il~~l 410 (416)
++|+.||+++|++|+..+
T Consensus 451 ~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 451 PDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999876
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2.5e-40 Score=326.03 Aligned_cols=391 Identities=29% Similarity=0.506 Sum_probs=301.6
Q ss_pred hhHHHhcCCCCceeeCCC-CCCceEEECCeeeeCCCCCCCCccccCCChhhHHHhhhcccCCCCCCCCCCCcHHHHHHHh
Q 014922 2 LKMVVDSGLKDDLVLGDP-NAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRRN 80 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~-~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~~~~l~~~ 80 (416)
.++++++|+.+++.+... ....+++.+|+.+.+|.+...++...++++.++++.+...+.. .....+++|+.+|++++
T Consensus 80 ~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~l~~~ 158 (478)
T 2ivd_A 80 RALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELFSR-RAPEGVDESLAAFGRRH 158 (478)
T ss_dssp HHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHHHHGGGGCC-CCCTTCCCBHHHHHHHH
T ss_pred HHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHHHhhhhhcC-CCCCCCCCCHHHHHHHh
Confidence 589999999887775442 2346888999999998764444444567777777765544322 22236789999999999
Q ss_pred hCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHH-hhccCCCCCCCCCCCCCCC----Cce
Q 014922 81 LGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQ-EKNKAPKQPRDPRLPKPKG----QTV 155 (416)
Q Consensus 81 ~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~ 155 (416)
++++.++.++.|++.++|+.+++++|+.+++..+..++..+++++.++..... ... .. .. ...+ ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~---~~~~~~~~~~~ 230 (478)
T 2ivd_A 159 LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQ---AA--LP---AGTAPKLSGAL 230 (478)
T ss_dssp TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTC---C---------CCSCCCCCCE
T ss_pred hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhcccc---cc--Cc---ccccccccccE
Confidence 99999999999999999999999999999999998877778888776653211 000 00 00 0011 356
Q ss_pred eehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCceEEecCEEEEcCChHHHHhccCCCCHHHHh
Q 014922 156 GSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAG 234 (416)
Q Consensus 156 ~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~ 234 (416)
++++||+++|+++|++.++++|+++++|++|+.++++ |+|++.+ .+|. +++||+||+|+|+..+.+|+++.++...+
T Consensus 231 ~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~-~~v~~~~~~~g~-~~~ad~vV~a~~~~~~~~ll~~l~~~~~~ 308 (478)
T 2ivd_A 231 STFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGG-WRLIIEEHGRRA-ELSVAQVVLAAPAHATAKLLRPLDDALAA 308 (478)
T ss_dssp EEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--C-CEEEEEETTEEE-EEECSEEEECSCHHHHHHHHTTTCHHHHH
T ss_pred EEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCe-EEEEEeecCCCc-eEEcCEEEECCCHHHHHHHhhccCHHHHH
Confidence 8999999999999999999999999999999998877 8887421 3553 78999999999999999999877777778
Q ss_pred hhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCCC
Q 014922 235 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGI 314 (416)
Q Consensus 235 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~ 314 (416)
.++++++.++.+|++.|++++|+. + .++++++|..++.+...++|++..++..+|+|..++++++++..+..+
T Consensus 309 ~l~~~~~~~~~~v~l~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~ 381 (478)
T 2ivd_A 309 LVAGIAYAPIAVVHLGFDAGTLPA------P-DGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGL 381 (478)
T ss_dssp HHHTCCBCCEEEEEEEECTTSSCC------C-CSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGG
T ss_pred HHhcCCCCcEEEEEEEEccccCCC------C-CceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccc
Confidence 899999999999999999988853 1 356767665444556677888877776778788889999887665556
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCCCCchhH
Q 014922 315 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGR 394 (416)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~g~~~~~ 394 (416)
.+.+++++.+.++++|++++|.. .+|....+++|.+++|.+.+|+......+++.+.. .+||||||+++.|.|+++
T Consensus 382 ~~~~~~~~~~~~~~~l~~~~~~~--~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~--~~~l~~aG~~~~g~gv~g 457 (478)
T 2ivd_A 382 VEQDEDALAALAREELKALAGVT--ARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR--LPGLHLIGNAYKGVGLND 457 (478)
T ss_dssp GGSCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT--STTEEECSTTTSCCSHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh--CCCEEEEccCCCCCCHHH
Confidence 67889999999999999999864 46888889999999999999987766665555542 589999999988889999
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 014922 395 CVESAYEVASEVSNFLSQYA 414 (416)
Q Consensus 395 ai~sg~~aA~~il~~l~~~~ 414 (416)
|+.||++||++|+..+++++
T Consensus 458 A~~SG~~aA~~i~~~l~~~~ 477 (478)
T 2ivd_A 458 CIRNAAQLADALVAGNTSHA 477 (478)
T ss_dssp HHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHHHHHhhccCC
Confidence 99999999999998887653
No 6
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=1.7e-33 Score=276.41 Aligned_cols=365 Identities=13% Similarity=0.106 Sum_probs=262.8
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhHHHhhhcccCCC-CCCCCCCCcHHHHHHHh
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLR-PPPPGHEESVEEFVRRN 80 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~~~~~~-~~~~~~~~s~~~~l~~~ 80 (416)
.+|+++++ ++..... ..++++++|+++++|.+.. ...++...+++.+...+... .....+++|+++|++++
T Consensus 75 ~~l~~~~~--~~~~~~~--~~~~~~~~g~~~~~P~~~~----~~~l~~~~~~~~~~~ll~~~~~~~~~~~~s~~e~~~~~ 146 (484)
T 4dsg_A 75 DDVMDWAV--QGWNVLQ--RESWVWVRGRWVPYPFQNN----IHRLPEQDRKRCLDELVRSHARTYTEPPNNFEESFTRQ 146 (484)
T ss_dssp HHHHHHHC--SCEEEEE--CCCEEEETTEEEESSGGGC----GGGSCHHHHHHHHHHHHHHHHCCCSSCCSSHHHHHHHH
T ss_pred HHHHHHHh--hhhhhcc--CceEEEECCEEEEeCccch----hhhCCHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Confidence 47888874 3444322 3478899999999983211 12344444444332222100 11235788999999999
Q ss_pred hCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCceeehhh
Q 014922 81 LGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFRK 160 (416)
Q Consensus 81 ~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 160 (416)
+|+++++++++|++.++|+.+++++|+.++++++...+. ..++++++. ..... . ....+...|.+.|
T Consensus 147 ~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l--~~~~~~~~~----~~~~~------~-~~~~~~f~yp~~g 213 (484)
T 4dsg_A 147 FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDL--ERIRRNIQE----NRDDL------G-WGPNATFRFPQRG 213 (484)
T ss_dssp HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCH--HHHHHHHHH----TCCCC------C-CSTTSEEEEESSS
T ss_pred hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCH--HHHHHHHhh----ccccc------C-CCccceEEeecCC
Confidence 999999999999999999999999999988776542000 012222222 11000 0 0011222334679
Q ss_pred hHhHHHHHHHHHhcc-ceecC--ceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCC----CCHHHH
Q 014922 161 GLTMLPEAISKRLGS-KVKLS--WKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRP----LSVDAA 233 (416)
Q Consensus 161 G~~~l~~~L~~~lg~-~I~l~--~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~----~~~~~~ 233 (416)
|+++|+++|++.++. +|+++ ++|++|+.++++ |++ .+|. ++.||+||+|+|++.+.+++.+ .+++..
T Consensus 214 G~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~-v~~----~~G~-~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~ 287 (484)
T 4dsg_A 214 GTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKT-ITF----SNGE-VVSYDYLISTVPFDNLLRMTKGTGFKGYDEWP 287 (484)
T ss_dssp CTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTE-EEE----TTSC-EEECSEEEECSCHHHHHHHEECSSCTTGGGHH
T ss_pred CHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCE-EEE----CCCC-EEECCEEEECCCHHHHHHHhhccCCCCCHHHH
Confidence 999999999999975 89999 569999987765 654 4664 7999999999999999999865 456677
Q ss_pred hhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCC
Q 014922 234 GALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLG 313 (416)
Q Consensus 234 ~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~ 313 (416)
+.+.++.|.++.+|++.|+.+.... + ..++++++|+.+ .++..+++.++.+|..+|+|++++++.++.. .
T Consensus 288 ~~l~~l~y~s~~~v~l~~~~~~~~~--~----~~~~~i~vp~~~-~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~ 357 (484)
T 4dsg_A 288 AIADKMVYSSTNVIGIGVKGTPPPH--L----KTACWLYFPEDT-SPFYRATVFSNYSKYNVPEGHWSLMLEVSES---K 357 (484)
T ss_dssp HHHHHCCEEEEEEEEEEEESCCCGG--G----TTCCEEECCSTT-CSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---T
T ss_pred HHHhCCCcCceEEEEEEEcCCCccc--C----CCCeEEEEEcCC-CeEEEEEeecCCCcccCCCCeEEEEEEEecC---c
Confidence 8889999999999999999863210 1 235677777654 3455677778788888899988888777543 2
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCCCC-cEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeec---cCCC
Q 014922 314 ILSKKESELVEAVDRDLRKMLINPNAKDP-LVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGN---YVAG 389 (416)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~---~~~g 389 (416)
....+++++++.++++|.++.+.. ..++ ...++.+|+++||+|.+||.+.+..+++.+.+ . ||+++|. |..+
T Consensus 358 ~~~~~d~~l~~~a~~~L~~~~~~~-~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~--~-~l~~~Gr~g~~~y~ 433 (484)
T 4dsg_A 358 YKPVNHSTLIEDCIVGCLASNLLL-PEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMS--R-CIYSRGRFGAWRYE 433 (484)
T ss_dssp TBCCCTTSHHHHHHHHHHHTTSCC-TTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--T-TEEECSTTTTCCGG
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCC-ccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHh--C-CcEeecCCcccccC
Confidence 446789999999999999976543 2234 34578999999999999999999999988886 3 9999996 5444
Q ss_pred -CchhHHHHHHHHHHHHHH
Q 014922 390 -VALGRCVESAYEVASEVS 407 (416)
Q Consensus 390 -~~~~~ai~sg~~aA~~il 407 (416)
.+++.|+.||..||++|+
T Consensus 434 v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 434 VGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp GCSHHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHHHH
Confidence 368889999999999998
No 7
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=1.2e-31 Score=266.59 Aligned_cols=366 Identities=14% Similarity=0.147 Sum_probs=253.8
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCcc-ccCCChh---hHHHhhhcccCC-CCCC-----CCCCC
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPI-FDLMSIG---GKIRAGLGALGL-RPPP-----PGHEE 71 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~-~~~l~~~---~~lr~~~~~~~~-~~~~-----~~~~~ 71 (416)
+++++++|+...... ..+..+++.+|+.+.++..++.... ....... ..+..+...+.. .++. ..+++
T Consensus 69 ~~l~~~lgl~~~~~~--~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (520)
T 1s3e_A 69 LRLAKELGLETYKVN--EVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNM 146 (520)
T ss_dssp HHHHHHTTCCEEECC--CSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTS
T ss_pred HHHHHHcCCcceecc--cCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhcc
Confidence 578999999864433 2233456789988887754322100 0000000 011111111100 0111 13679
Q ss_pred cHHHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 014922 72 SVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPK 151 (416)
Q Consensus 72 s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (416)
|+++|++++++++.++.++.+++.++++.+++++|+.+++..+. .++++.. +... ..
T Consensus 147 s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~----~~g~~~~-----~~~~--------------~~ 203 (520)
T 1s3e_A 147 TMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVK----QCGGTTR-----IIST--------------TN 203 (520)
T ss_dssp BHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHH----TTTCHHH-----HHCS--------------TT
T ss_pred CHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHh----hcCchhh-----hccc--------------CC
Confidence 99999999998888899999999999999999999998776554 3444322 1110 11
Q ss_pred CCceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhcc-CC-CC
Q 014922 152 GQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL-RP-LS 229 (416)
Q Consensus 152 ~~~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll-~~-~~ 229 (416)
+...+++.||+++|+++|++.+|++|++|++|++|+.++++ |+|+ +.+|+ +++||+||+|+|+..+.+++ .| .+
T Consensus 204 ~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~-v~v~--~~~g~-~~~ad~VI~a~p~~~l~~l~~~p~lp 279 (520)
T 1s3e_A 204 GGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTREN-VLVE--TLNHE-MYEAKYVISAIPPTLGMKIHFNPPLP 279 (520)
T ss_dssp STTSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEECSSSS-EEEE--ETTSC-EEEESEEEECSCGGGGGGSEEESCCC
T ss_pred CcceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCe-EEEE--ECCCe-EEEeCEEEECCCHHHHcceeeCCCCC
Confidence 33457899999999999999999999999999999988876 8876 35674 78999999999999998884 44 44
Q ss_pred HHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCC
Q 014922 230 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGA 309 (416)
Q Consensus 230 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~ 309 (416)
+...+.++++.+.++.++++.|++++|+.. .+ .+.+++..+..++ ..+|++.. .+++..++++|+++.
T Consensus 280 ~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-----~~--~g~~~~~~~~~~~-~~~~d~~~----~~~~~~~l~~~~~~~ 347 (520)
T 1s3e_A 280 MMRNQMITRVPLGSVIKCIVYYKEPFWRKK-----DY--CGTMIIDGEEAPV-AYTLDDTK----PEGNYAAIMGFILAH 347 (520)
T ss_dssp HHHHHHTTSCCBCCEEEEEEECSSCGGGGG-----TE--EEEEEECSTTCSC-SEEEECCC----TTSCSCEEEEEEETH
T ss_pred HHHHHHHHhCCCcceEEEEEEeCCCcccCC-----CC--CceeeccCCCCce-EEEeeCCC----CCCCCCEEEEEccch
Confidence 556778899999999999999999999642 22 2333322222222 23444321 122346788888765
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CC-CCCCCCHHHHHHHHHHHhhhcCCCCEEE
Q 014922 310 TNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AI-PQFLVGHLDLLDAAKSSLRDNGYQGLFL 382 (416)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~------~~-p~~~~g~~~~~~~~~~~l~~~~~~~l~~ 382 (416)
.+..|.+++++++.+.++++|++++|.....+|..+.+++|.. ++ +.+.+|+... +++.+.+ |++||||
T Consensus 348 ~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~---~~~~l~~-p~~~L~f 423 (520)
T 1s3e_A 348 KARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQ---YGRVLRQ-PVDRIYF 423 (520)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHH---HGGGTTC-CBTTEEE
T ss_pred hhhhhhcCCHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCcccc---chHHHhC-CCCCEEE
Confidence 4455677899999999999999999854235788899999963 23 3677887543 3335666 7899999
Q ss_pred eeccCC---CCchhHHHHHHHHHHHHHHHHhhh
Q 014922 383 GGNYVA---GVALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 383 aG~~~~---g~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
||+++. ..++++|+.||++||++|+..+++
T Consensus 424 AG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 424 AGTETATHWSGYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp CSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTS
T ss_pred eehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhc
Confidence 998763 347999999999999999998754
No 8
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.6e-31 Score=259.12 Aligned_cols=336 Identities=13% Similarity=0.132 Sum_probs=251.4
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEEC-----------CeeeeCCCCCCCCccccCCChhhHHHhhhcccCCCCCCCCCC
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWN-----------GRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRPPPPGHE 70 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~-----------g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~~~~~~~~~~~~~ 70 (416)
.+|++++|+..++++.+. .+++++ ++.+.++. ....+++.++++........+. ...++
T Consensus 66 ~~l~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 135 (425)
T 3ka7_A 66 ACFLKEVEASVNIVRSEM---TTVRVPLKKGNPDYVKGFKDISFND------FPSLLSYKDRMKIALLIVSTRK-NRPSG 135 (425)
T ss_dssp HHHHHHTTCCCCEEECCC---CEEEEESSTTCCSSTTCEEEEEGGG------GGGGSCHHHHHHHHHHHHHTTT-SCCCS
T ss_pred HHHHHHhCCCceEEecCC---ceEEeecCCCcccccccccceehhh------hhhhCCHHHHHHHHHHHHhhhh-cCCCC
Confidence 578999999988877552 244433 55565553 1235677777665433221211 23578
Q ss_pred CcHHHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCC
Q 014922 71 ESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKP 150 (416)
Q Consensus 71 ~s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (416)
.|+.+|++++++.+.++.++++++.++++.+++++|+.+++..+..+.. .
T Consensus 136 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~----------------------------- 185 (425)
T 3ka7_A 136 SSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR-F----------------------------- 185 (425)
T ss_dssp SBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH-H-----------------------------
T ss_pred CCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh-c-----------------------------
Confidence 9999999999999999999999999999999999999988887764321 0
Q ss_pred CCCceeehhhhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChHHHHhccC
Q 014922 151 KGQTVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSYVASSLLR 226 (416)
Q Consensus 151 ~~~~~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~ 226 (416)
+ ..+++.||++.|+++|++.+ |++|+++++|++|..++++ |+ |+ + +|. +++||+||+|+|+..+.+|++
T Consensus 186 -~-~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~gv~--~-~g~-~~~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 186 -G-GTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENGK-AAGII--A-DDR-IHDADLVISNLGHAATAVLCS 258 (425)
T ss_dssp -C-SCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTE-EEEEE--E-TTE-EEECSEEEECSCHHHHHHHTT
T ss_pred -C-CccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECCE-EEEEE--E-CCE-EEECCEEEECCCHHHHHHhcC
Confidence 1 23688999999999999987 5799999999999998776 65 65 3 353 799999999999999999986
Q ss_pred CC-----CHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEE
Q 014922 227 PL-----SVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVL 301 (416)
Q Consensus 227 ~~-----~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~ 301 (416)
+. ++...+.+.++.+++..+|++.++++.+. +++++++. +...+.++++.|..+|+.+|+|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~s~~~p~~ap~G~~~ 327 (425)
T 3ka7_A 259 EALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG----------HTGVLLTP-YTRRINGVNEVTQADPELAPPGKHL 327 (425)
T ss_dssp TTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC----------SSSEEECC-SSSSEEEEECGGGTCGGGSCTTCEE
T ss_pred CcccccCCHHHHHHhhCcCCCceEEEEeecCCCccC----------cCEEEECC-ChhhcceEEeccCCCCCcCCCCCeE
Confidence 42 45567788888999889999999987542 23445433 3445677888898899999999999
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEE
Q 014922 302 LLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLF 381 (416)
Q Consensus 302 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~ 381 (416)
+.+++...+. . .+. .++.++.++++|++++|. ..+....+++|.+++|++.+|+... ..... |++|||
T Consensus 328 l~~~~~~~~~-~-~~~-~~~~~~~~~~~l~~~~p~---~~~~~~~v~~~~~~~P~~~~~~~~~-----~~~~~-p~~gL~ 395 (425)
T 3ka7_A 328 TMCHQYVAPE-N-VKN-LESEIEMGLEDLKEIFPG---KRYEVLLIQSYHDEWPVNRAASGTD-----PGNET-PFSGLY 395 (425)
T ss_dssp EEEEEEECGG-G-GGG-HHHHHHHHHHHHHHHSTT---CCEEEEEEEEEBTTBCSBSSCTTCC-----CCSBC-SSBTEE
T ss_pred EEEEeccccc-c-ccc-hHHHHHHHHHHHHHhCCC---CceEEEEEEEECCCccccccccCCC-----CCCCC-CcCCeE
Confidence 8877654321 1 111 246679999999999975 2456678899999999999996432 12233 667999
Q ss_pred EeeccCCC---CchhHHHHHHHHHHHHHH
Q 014922 382 LGGNYVAG---VALGRCVESAYEVASEVS 407 (416)
Q Consensus 382 ~aG~~~~g---~~~~~ai~sg~~aA~~il 407 (416)
+||||+.+ .++++|+.||++||++|+
T Consensus 396 laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 396 VVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp ECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 99999976 789999999999999986
No 9
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.98 E-value=1.1e-31 Score=266.51 Aligned_cols=372 Identities=12% Similarity=0.114 Sum_probs=253.6
Q ss_pred hhHHHhcCCCC-ceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhHHHhhhcccC--C-CCCCCCCCCcHHHHH
Q 014922 2 LKMVVDSGLKD-DLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALG--L-RPPPPGHEESVEEFV 77 (416)
Q Consensus 2 ~~l~~elGl~~-~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~~~~--~-~~~~~~~~~s~~~~l 77 (416)
++|++|+|... ++....+ .++++++|+++++|.... + ..+......+.....+. + ......++.|+++|+
T Consensus 76 ~~l~~e~~~~~~~~~~~~~--~~~i~~~g~~~~~p~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 149 (513)
T 4gde_A 76 DDCLDEALPKEDDWYTHQR--ISYVRCQGQWVPYPFQNN--I--SMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWI 149 (513)
T ss_dssp HHHHHHHSCSGGGEEEEEC--CEEEEETTEEEESSGGGG--G--GGSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHH
T ss_pred HHHHHHhCCccceeEEecC--ceEEEECCeEeecchhhh--h--hhcchhhHHHHHHHHHHHHHhhhcccccccCHHHHH
Confidence 67899987754 3444333 478999999999985311 1 12222222222111110 0 012235678999999
Q ss_pred HHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCceee
Q 014922 78 RRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGS 157 (416)
Q Consensus 78 ~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (416)
.+++|+++++.++.|++.++|+.+++++|+.|+.+++... +........+..... ..........+.
T Consensus 150 ~~~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~-----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 216 (513)
T 4gde_A 150 VRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAP-----NLKAVTTNVILGKTA--------GNWGPNATFRFP 216 (513)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCC-----CHHHHHHHHHHTCCC--------CSCBTTBEEEEE
T ss_pred HHhhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhccc-----chhhhhhhhhhcccc--------cccccccceeec
Confidence 9999999999999999999999999999999987766421 111111111111000 000112234456
Q ss_pred hhhhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHHHHh
Q 014922 158 FRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAG 234 (416)
Q Consensus 158 ~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~ 234 (416)
++||+++|+++|++.| +++|++|++|++|..++++ +++ .+|. ++.||+||+|+|++.+.+++.+ +....
T Consensus 217 ~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~-v~~----~~G~-~~~ad~vI~t~P~~~l~~~l~~--~~~~~ 288 (513)
T 4gde_A 217 ARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT-VTL----QDGT-TIGYKKLVSTMAVDFLAEAMND--QELVG 288 (513)
T ss_dssp SSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE-EEE----TTSC-EEEEEEEEECSCHHHHHHHTTC--HHHHH
T ss_pred ccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE-EEE----cCCC-EEECCEEEECCCHHHHHHhcCc--hhhHh
Confidence 7899999999999988 4689999999999987653 433 4775 8999999999999999999874 34556
Q ss_pred hhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCC--------------------CCCceEEEEccCCCCCCC
Q 014922 235 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRS--------------------QGVETLGTIYSSSLFPNR 294 (416)
Q Consensus 235 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~~s~~~~~~ 294 (416)
....+.|.++..|++.++...... ......+.+|.. ....+.+..|.+..++..
T Consensus 289 ~~~~l~y~~~~~v~l~~~~~~~~~------~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~ 362 (513)
T 4gde_A 289 LTKQLFYSSTHVIGVGVRGSRPER------IGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQS 362 (513)
T ss_dssp HHTTCCEEEEEEEEEEEESSCCTT------TTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSC
T ss_pred hhhcccCCceEEEEEEEecccccc------ccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCccc
Confidence 778889999999999998754321 011112222221 112233344445555555
Q ss_pred CCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhh
Q 014922 295 APAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRD 374 (416)
Q Consensus 295 ~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~ 374 (416)
.+.+...+.+++++...+.+..++++++++.++++|.++.+.....++....+.||+++||+|.+|+.+.+..+++.++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~ 442 (513)
T 4gde_A 363 TEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD 442 (513)
T ss_dssp CSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH
T ss_pred ccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh
Confidence 55444455555554444567788999999999999999887654445678889999999999999999999999888876
Q ss_pred cCCCCEEEeec---cCCC-CchhHHHHHHHHHHHHHHHH
Q 014922 375 NGYQGLFLGGN---YVAG-VALGRCVESAYEVASEVSNF 409 (416)
Q Consensus 375 ~~~~~l~~aG~---~~~g-~~~~~ai~sg~~aA~~il~~ 409 (416)
+|||++|. |... .+++.|+.+|..||+.|+..
T Consensus 443 ---~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 443 ---KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp ---TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred ---cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 69999993 3221 25777999999999999864
No 10
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=1.2e-29 Score=245.61 Aligned_cols=332 Identities=14% Similarity=0.103 Sum_probs=235.2
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhHHHhhhcccCCCC-CCCCCCCcHHHHHHHh
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLGALGLRP-PPPGHEESVEEFVRRN 80 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~~~~~~~-~~~~~~~s~~~~l~~~ 80 (416)
.+|++++|+..++....+. ..++++|+.+.+|... ..++..++.+.......... ..+.++.|+.+|+.++
T Consensus 66 ~~l~~~lg~~~~~~~~~~~--~~~~~~g~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 137 (421)
T 3nrn_A 66 AHLLRILGAKVEIVNSNPK--GKILWEGKIFHYRESW------KFLSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEK 137 (421)
T ss_dssp HHHHHHHTCCCCEEECSSS--CEEEETTEEEEGGGGG------GGCC--------CCHHHHHTTCCCCCCSBHHHHHHHH
T ss_pred HHHHHHhCCcceEEECCCC--eEEEECCEEEEcCCch------hhCCHhHHHHHHHHHHHHHhccCCCCCCCHHHHHHHh
Confidence 4789999998887776553 4566799999888532 23444444433211100111 2234669999999998
Q ss_pred -hCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCceeehh
Q 014922 81 -LGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFR 159 (416)
Q Consensus 81 -~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (416)
++.+.++.++.|++.++++.+++++|+.+++..+..+... + ..++++
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~-g~~~~~ 185 (421)
T 3nrn_A 138 IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW-------------------------------G-GPGLIR 185 (421)
T ss_dssp TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH-------------------------------C-SCEEET
T ss_pred cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc-------------------------------C-Ccceec
Confidence 8999999999999999999999999999988887743210 1 136889
Q ss_pred hhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccC-C-CCHHHHh
Q 014922 160 KGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLR-P-LSVDAAG 234 (416)
Q Consensus 160 gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~-~-~~~~~~~ 234 (416)
||++.++++|++.+ |++|+++++|++|+.++++ | |+ + +|. +++||+||+|+|+..+.+|++ + .++...+
T Consensus 186 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-v-V~--~-~g~-~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~ 259 (421)
T 3nrn_A 186 GGCKAVIDELERIIMENKGKILTRKEVVEINIEEKK-V-YT--R-DNE-EYSFDVAISNVGVRETVKLIGRDYFDRDYLK 259 (421)
T ss_dssp TCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTE-E-EE--T-TCC-EEECSEEEECSCHHHHHHHHCGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCE-E-EE--e-CCc-EEEeCEEEECCCHHHHHHhcCcccCCHHHHH
Confidence 99999999999987 5799999999999988776 7 64 3 453 799999999999999999986 3 4456677
Q ss_pred hhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCCC
Q 014922 235 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGI 314 (416)
Q Consensus 235 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~ 314 (416)
.+.++.++++.++++.++++.+ ...+++++.+.. +.++.+.|+.+|..+|+|+.++.++..-
T Consensus 260 ~~~~~~~~~~~~v~l~~~~~~~----------~~~~~~~~~~~~--~~~i~~~s~~~p~~ap~G~~~~~~~~~~------ 321 (421)
T 3nrn_A 260 QVDSIEPSEGIKFNLAVPGEPR----------IGNTIVFTPGLM--INGFNEPSALDKSLAREGYTLIMAHMAL------ 321 (421)
T ss_dssp HHHTCCCCCEEEEEEEEESSCS----------SCSSEEECTTSS--SCEEECGGGTCGGGSCTTEEEEEEEEEC------
T ss_pred HHhCCCCCceEEEEEEEcCCcc----------cCCeEEEcCCcc--eeeEeccCCCCCCcCCCCceEEEEEEee------
Confidence 8889999999999999998632 223455544433 5678888888888999998887766521
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCCCC-ch-
Q 014922 315 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGV-AL- 392 (416)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~g~-~~- 392 (416)
...++++.++.++++|++++| . .....+++|..++|++.+.... .++ .. + +|||+||||+.+. ++
T Consensus 322 ~~~~~~~~~~~~~~~L~~~~p-~----~~~~~~~~~~~~~p~~~~~~~~---~~~---~~-~-~gl~laGd~~~~~~g~~ 388 (421)
T 3nrn_A 322 KNGNVKKAIEKGWEELLEIFP-E----GEPLLAQVYRDGNPVNRTRAGL---HIE---WP-L-NEVLVVGDGYRPPGGIE 388 (421)
T ss_dssp TTCCHHHHHHHHHHHHHHHCT-T----CEEEEEEEC----------------CCC---CC-C-SSEEECSTTCCCTTCCH
T ss_pred ccccHHHHHHHHHHHHHHHcC-C----CeEEEeeeccCCCCcccccCCC---CCC---CC-C-CcEEEECCcccCCCcee
Confidence 122345669999999999998 2 2445678899999988533211 111 23 6 9999999999877 56
Q ss_pred -hHHHHHHHHHHHHHHHHhhh
Q 014922 393 -GRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 393 -~~ai~sg~~aA~~il~~l~~ 412 (416)
++|+.||++||+.| .+++
T Consensus 389 ~~ga~~sg~~aA~~l--~~~~ 407 (421)
T 3nrn_A 389 VDGIALGVMKALEKL--NLGS 407 (421)
T ss_dssp HHHHHHHHHHHHHHT--TSCC
T ss_pred eehHHHHHHHHHHHh--CcCc
Confidence 99999999999998 5544
No 11
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.97 E-value=3e-30 Score=252.30 Aligned_cols=296 Identities=17% Similarity=0.163 Sum_probs=218.3
Q ss_pred CCCCcHHHHHHHhhCHHHHHHhhhhhhcccccCCcc-hhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCC
Q 014922 68 GHEESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPS-KLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPR 146 (416)
Q Consensus 68 ~~~~s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~-~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~ 146 (416)
.+++|+.+|++++++.+.++.++.+++.+.|+.+++ ++|+.+++..+. ..|++...+..
T Consensus 143 ~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~----~~g~~~~~~~~---------------- 202 (453)
T 2yg5_A 143 LDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAA----SAGSFSHLVDE---------------- 202 (453)
T ss_dssp HHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHH----HTTCHHHHHCH----------------
T ss_pred hhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhc----cCCcHhhhccC----------------
Confidence 358999999999988888889999999999999999 999988776654 23433211000
Q ss_pred CCCCCCCceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhcc-
Q 014922 147 LPKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLL- 225 (416)
Q Consensus 147 ~~~~~~~~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll- 225 (416)
.+...++++||+++|+++|++.+|++|++|++|++|+.++++.|+|+ + +|. +++||+||+|+|+.++.+++
T Consensus 203 ----~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~--~-~~~-~~~ad~VI~a~p~~~~~~l~~ 274 (453)
T 2yg5_A 203 ----DFILDKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLA--D-GDI-RVEASRVILAVPPNLYSRISY 274 (453)
T ss_dssp ----HHHTCEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEE--T-TTE-EEEEEEEEECSCGGGGGGSEE
T ss_pred ----CCcceEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEE--E-CCe-EEEcCEEEEcCCHHHHhcCEe
Confidence 01235789999999999999999999999999999998766326664 4 553 78999999999999998884
Q ss_pred CC-CCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCC-cEEEE
Q 014922 226 RP-LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAG-RVLLL 303 (416)
Q Consensus 226 ~~-~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g-~~~l~ 303 (416)
.+ .++...++++++.+.++.+|++.|++++|+.. .+ .+.+++.... ..++|++. .|++ ..+++
T Consensus 275 ~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-----~~--~g~~~~~~~~---~~~~~~~~-----~~~~~~~~l~ 339 (453)
T 2yg5_A 275 DPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED-----GL--SGTGFGASEV---VQEVYDNT-----NHEDDRGTLV 339 (453)
T ss_dssp ESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGG-----TE--EEEEECTTSS---SCEEEECC-----CTTCSSEEEE
T ss_pred CCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCC-----CC--CceeecCCCC---eEEEEeCC-----CCCCCCCEEE
Confidence 34 44556678888889999999999999999642 11 2333322211 12444432 3333 46788
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCC------C-CCCCCCHHHHHHHHHHHhhhcC
Q 014922 304 NYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQA------I-PQFLVGHLDLLDAAKSSLRDNG 376 (416)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~------~-p~~~~g~~~~~~~~~~~l~~~~ 376 (416)
+++++..++.|..++++++.+.++++|++++|.. ..+|..+.+++|... + +.+.+|+.... .+.+.+ |
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~-~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~---~~~~~~-p 414 (453)
T 2yg5_A 340 AFVSDEKADAMFELSAEERKATILASLARYLGPK-AEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRY---GADSRT-P 414 (453)
T ss_dssp EEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGG-GGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHH---GGGTTC-C
T ss_pred EEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCcc-CCCccEEEEeecCCCCCCCCCCcCcCCCCccccc---hHHHhC-C
Confidence 8886544444566788999999999999999753 357888889999742 2 35677865432 234566 7
Q ss_pred CCCEEEeeccCC---CCchhHHHHHHHHHHHHHHHHhh
Q 014922 377 YQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 377 ~~~l~~aG~~~~---g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
++||||||++++ ..++++|+.||++||++|+..++
T Consensus 415 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp BTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred cCceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 899999999874 23699999999999999998763
No 12
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.96 E-value=1.7e-26 Score=228.14 Aligned_cols=350 Identities=15% Similarity=0.093 Sum_probs=238.2
Q ss_pred ChhHHHhcCCCCceeeCC--C-CCCceEEEC--CeeeeCCCCCCCCccccCCChhhHHHhhhc--------ccC--CCCC
Q 014922 1 MLKMVVDSGLKDDLVLGD--P-NAPRFVLWN--GRLRPVPSSPTDLPIFDLMSIGGKIRAGLG--------ALG--LRPP 65 (416)
Q Consensus 1 ~~~l~~elGl~~~l~~~~--~-~~~~~i~~~--g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~--------~~~--~~~~ 65 (416)
++++++++|+.+++.+.. . ....+++.+ |+.+.+|... . ...+ ...+..+.. .+. +.+.
T Consensus 102 ~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (495)
T 2vvm_A 102 VWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA--E--DELL--RSALHKFTNVDGTNGRTVLPFPHDMF 175 (495)
T ss_dssp HHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH--H--HHHH--HHHHHHHHCSSSSTTTTTCSCTTSTT
T ss_pred HHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHHH--H--HHHH--HHHHHHHHccchhhhhhcCCCCCCcc
Confidence 367899999988777753 2 123565666 6766665310 0 0000 000001111 000 1000
Q ss_pred -----CCCCCCcHHHHHHHhh--CHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccC
Q 014922 66 -----PPGHEESVEEFVRRNL--GDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKA 138 (416)
Q Consensus 66 -----~~~~~~s~~~~l~~~~--g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 138 (416)
...+++|+.+|+++.. ..+..+.++++++..+++.+++++|+.+++..+.. ..+++ .+...
T Consensus 176 ~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~---~~~~~-~~~~~-------- 243 (495)
T 2vvm_A 176 YVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAM---SGYTY-QGCMD-------- 243 (495)
T ss_dssp SSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHH---TTSSH-HHHHH--------
T ss_pred cCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHH---cCCCH-HHHHh--------
Confidence 0135789999999864 33456789999999999999999999988876652 12222 11110
Q ss_pred CCCCCCCCCCCCCCCceeehhhhHhHHHHHHHHHhc----cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEE
Q 014922 139 PKQPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRLG----SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVM 214 (416)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~lg----~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~ 214 (416)
....++++||++.++++|++.+. ++|+++++|++|+.++++ |+|++ .+|. +++||+||+
T Consensus 244 -------------~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~--~~g~-~~~ad~vI~ 306 (495)
T 2vvm_A 244 -------------CLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTA--RDGR-EFVAKRVVC 306 (495)
T ss_dssp -------------HHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEE--TTCC-EEEEEEEEE
T ss_pred -------------hhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEE--CCCC-EEEcCEEEE
Confidence 12357899999999999999984 459999999999988776 88874 5664 789999999
Q ss_pred cCChHHHHhc-cCC-CCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCC
Q 014922 215 TVPSYVASSL-LRP-LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFP 292 (416)
Q Consensus 215 a~p~~~~~~l-l~~-~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~ 292 (416)
|+|+..+.++ +.| .++...++++.+.|.++.+|++.|++++|. .+ .|+..+ +. ++ ..+|+..
T Consensus 307 a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~-------~~--~g~~~~-~~--~~-~~~~~~~--- 370 (495)
T 2vvm_A 307 TIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR-------SW--TGIAYP-FN--KL-CYAIGDG--- 370 (495)
T ss_dssp CCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG-------GE--EEEECS-SC--SS-CEEEEEE---
T ss_pred CCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC-------Cc--eeEecC-CC--Cc-EEEecCC---
Confidence 9999999988 344 455667788889999999999999998874 12 233322 21 11 2333221
Q ss_pred CCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecC------CCCCCCCCCHHHHHH
Q 014922 293 NRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQ------QAIPQFLVGHLDLLD 366 (416)
Q Consensus 293 ~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~------~~~p~~~~g~~~~~~ 366 (416)
..|++..+|++|++.. . . +++++..+.++++|+++++. ..+|..+.+++|. ++++++.||+....
T Consensus 371 -~~~~~~~vl~~~~~~~-~-~---~~~~e~~~~~~~~L~~~~~~--~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~- 441 (495)
T 2vvm_A 371 -TTPAGNTHLVCFGNSA-N-H---IQPDEDVRETLKAVGQLAPG--TFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSEC- 441 (495)
T ss_dssp -ECTTSCEEEEEEECST-T-C---CCTTTCHHHHHHHHHTTSTT--SCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHH-
T ss_pred -CCCCCCeEEEEEeCcc-c-c---CCCHHHHHHHHHHHHHhcCC--CCCceEEEEeEcCCCCCCCCCccCcCCCcchhh-
Confidence 2355667777877532 1 1 34556678899999998763 2467888899996 46888899986432
Q ss_pred HHHHHhhhcCCCCEEEeeccCC---CCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 367 AAKSSLRDNGYQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 367 ~~~~~l~~~~~~~l~~aG~~~~---g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.+.+.+ |.++|||||+++. ..++++|++||++||++|+..+++.
T Consensus 442 --~~~l~~-p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~ 488 (495)
T 2vvm_A 442 --LQGLRE-KHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTK 488 (495)
T ss_dssp --HHHHHC-CBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred --HHHHhC-cCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccc
Confidence 235666 7899999999875 3568999999999999999988654
No 13
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.95 E-value=6.2e-27 Score=220.21 Aligned_cols=232 Identities=15% Similarity=0.148 Sum_probs=178.7
Q ss_pred ceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCC----C
Q 014922 154 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPL----S 229 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~----~ 229 (416)
..+...+|++.++++|++.++.+|+++++|++|+.++++ |+|++ .+|. +++||+||+|+|++.+.+|+.+. +
T Consensus 103 ~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~-~~v~~--~~g~-~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 103 CNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK-WEVSK--QTGS-PEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS-EEEEE--SSSC-CEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred cceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE-EEEEE--CCCC-EEEcCEEEECCCHHHHHHHhcccccccC
Confidence 457889999999999999998899999999999998887 99874 5664 67999999999999999998642 3
Q ss_pred HHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEE-ccCCCCCCCC-CCCcEEEEEEec
Q 014922 230 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTI-YSSSLFPNRA-PAGRVLLLNYIG 307 (416)
Q Consensus 230 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~s~~~~~~~-p~g~~~l~~~~~ 307 (416)
+...+.+.+++|.++.+|++.|++++|.. ....|++++.. ..++++ +++.+ +++. +++...++++.+
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~-------~~~~g~~~~~~---~~~~~~~~~~~k-~~r~~~~~~~~~v~~~~ 247 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGTKID-------VPWAGQYITSN---PCIRFVSIDNKK-RNIESSEIGPSLVIHTT 247 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC--C-------CSCSEEECSSC---SSEEEEEEHHHH-TTCCCC-CCCEEEEEEC
T ss_pred HHHHHHHhcCCccccEEEEEEECCCCccC-------CceeeEEccCC---cceEEEEccccC-CCCCCCCCCceEEEECC
Confidence 35678899999999999999999887753 22346676543 223444 44444 5432 333346677776
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhh-hcCCCCEEEeecc
Q 014922 308 GATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLR-DNGYQGLFLGGNY 386 (416)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~-~~~~~~l~~aG~~ 386 (416)
+.+++.+.+.+++++.+.++++|.+++|.. .+|..+.++||++++|++.... ... .+. . ..++|++||||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~v~rW~~a~p~~~~~~--~~~----~~~~~-~~~~l~laGd~ 318 (342)
T 3qj4_A 248 VPFGVTYLEHSIEDVQELVFQQLENILPGL--PQPIATKCQKWRHSQVTNAAAN--CPG----QMTLH-HKPFLACGGDG 318 (342)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHHHHHSCSC--CCCSEEEEEEETTCSBSSCCSS--SCS----CEEEE-TTTEEEECSGG
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHhccCC--CCCceeeeccccccccccccCC--Ccc----eeEec-CCccEEEEccc
Confidence 655455677899999999999999999842 5799999999999999885421 000 122 2 45899999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHH
Q 014922 387 VAGVALGRCVESAYEVASEVSNF 409 (416)
Q Consensus 387 ~~g~~~~~ai~sg~~aA~~il~~ 409 (416)
+.|.++++|+.||.+||++|+..
T Consensus 319 ~~g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 319 FTQSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp GSCSSHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCccHHHHHHHHHHHHHHhh
Confidence 99999999999999999999764
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.94 E-value=7.2e-27 Score=229.34 Aligned_cols=299 Identities=14% Similarity=0.161 Sum_probs=201.7
Q ss_pred CCCCcHHH--HHHHhhC---HHHHHHhhhhhhc-ccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCC
Q 014922 68 GHEESVEE--FVRRNLG---DEVFERLIEPFCS-GVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQ 141 (416)
Q Consensus 68 ~~~~s~~~--~l~~~~g---~~~~~~~~~p~~~-~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~ 141 (416)
.+++|+.+ |+.+... ....+.++++++. ..++.+++.+|+..++.. ..+.. .+
T Consensus 135 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~-~~------------------- 193 (472)
T 1b37_A 135 RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFSD-FG------------------- 193 (472)
T ss_dssp TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHHH-HC-------------------
T ss_pred chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-ccccc-cC-------------------
Confidence 46778765 5555431 2234556666653 345677777776544321 10000 00
Q ss_pred CCCCCCCCCCCCceeehhhhHhHHHHHHHHHh-----------ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecC
Q 014922 142 PRDPRLPKPKGQTVGSFRKGLTMLPEAISKRL-----------GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSR 210 (416)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l-----------g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad 210 (416)
.+..+..++||+++++++|++.+ +++|+++++|++|+.++++ |+|+ +.+|. +++||
T Consensus 194 ---------~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~v~--~~~g~-~~~ad 260 (472)
T 1b37_A 194 ---------DDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VTVK--TEDNS-VYSAD 260 (472)
T ss_dssp ---------SEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EEEE--ETTSC-EEEES
T ss_pred ---------CceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-EEEE--ECCCC-EEEcC
Confidence 01223345899999999999986 4589999999999998887 8886 45774 78999
Q ss_pred EEEEcCChHHHHhc---cCC-CCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEc
Q 014922 211 SVVMTVPSYVASSL---LRP-LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIY 286 (416)
Q Consensus 211 ~VI~a~p~~~~~~l---l~~-~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 286 (416)
+||+|+|+..+.++ +.| .++...++++++.+.++.+|++.|++++|+.. .+.++++.......... +|
T Consensus 261 ~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-------~~~~~~~~~~~~~~~~~-~~ 332 (472)
T 1b37_A 261 YVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-------KGREFFLYASSRRGYYG-VW 332 (472)
T ss_dssp EEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS-------TTCSEEEECCSSTTSSC-EE
T ss_pred EEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC-------CCcceEEecccCCccce-ee
Confidence 99999999999875 234 44556778888888899999999999999741 12334332221111111 22
Q ss_pred cCCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEec------CCCCCCCCCC
Q 014922 287 SSSLFPNRAPAGRVLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVW------QQAIPQFLVG 360 (416)
Q Consensus 287 ~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w------~~~~p~~~~g 360 (416)
.+ ++...| +..+|++++.+..+..+..++++++.+.+++.|++++|.....+|..+.+.+| .++++.+.+|
T Consensus 333 ~~--~~~~~p-~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g 409 (472)
T 1b37_A 333 QE--FEKQYP-DANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVG 409 (472)
T ss_dssp EE--CTTTST-TCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTT
T ss_pred ec--ccCCCC-CCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCC
Confidence 11 222334 34566666654332335567899999999999999995433356777888899 4456667778
Q ss_pred HHHHHHHHHHHhhhcCCCCEEEeeccCC---CCchhHHHHHHHHHHHHHHHHhhhccc
Q 014922 361 HLDLLDAAKSSLRDNGYQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLSQYAY 415 (416)
Q Consensus 361 ~~~~~~~~~~~l~~~~~~~l~~aG~~~~---g~~~~~ai~sg~~aA~~il~~l~~~~~ 415 (416)
+.... .+.+++ |+++|||||++++ +.++++|+.||++||++|+..+.+..+
T Consensus 410 ~~~~~---~~~l~~-p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~ 463 (472)
T 1b37_A 410 VNRYE---YDQLRA-PVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMC 463 (472)
T ss_dssp CCHHH---HHHHHC-CBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CChhH---HHHHhc-cCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcC
Confidence 65422 235566 8899999999875 457899999999999999999877654
No 15
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.94 E-value=6.1e-26 Score=230.70 Aligned_cols=238 Identities=15% Similarity=0.184 Sum_probs=182.7
Q ss_pred ceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC----CCCceEEecCEEEEcCChHHHHhc-----
Q 014922 154 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET----PEGLVSLRSRSVVMTVPSYVASSL----- 224 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~----~~g~~~~~ad~VI~a~p~~~~~~l----- 224 (416)
..+.++|||++|+++|++.+ +|++|++|++|++++++ |+|++.+ .+| .+++||+||+|+|+.+++++
T Consensus 392 ~~~~~~gG~~~l~~~La~~l--~I~l~~~V~~I~~~~~~-v~V~~~~~~~~~~~-~~~~Ad~VI~tvP~~vL~~l~~~i~ 467 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRYTASG-CEVIAVNTRSTSQT-FIYKCDAVLCTLPLGVLKQQPPAVQ 467 (662)
T ss_dssp CCEEETTCTTHHHHHHTTTC--EEETTEEEEEEEEETTE-EEEEEEESSCTTCE-EEEEESEEEECCCHHHHHCSSCSSE
T ss_pred ceeeecCcHHHHHHHHHhcC--ceecCCeEEEEEECCCc-EEEEEeecccCCCC-eEEEeCEEEECCCHHHHhcccCceE
Confidence 35789999999999999877 89999999999999887 8888642 113 47999999999999999873
Q ss_pred cCC-CCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEE
Q 014922 225 LRP-LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLL 303 (416)
Q Consensus 225 l~~-~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~ 303 (416)
|.| .++...++++++.|.++.||++.|++++|++ +..++|++.+..+....+.++|++. +..+|.
T Consensus 468 f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~------~~~~~G~l~~~~~~~~~~~~~~~~~--------~~~vL~ 533 (662)
T 2z3y_A 468 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP------SVNLFGHVGSTTASRGELFLFWNLY--------KAPILL 533 (662)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT------TCSEEEECCSSSTTTTEEEEEECCS--------SSSEEE
T ss_pred EcCCCCHHHHHHHHhCCccceeEEEEEcCcccccC------CCCceeeecCCCCCCCceeEEEeCC--------CCCEEE
Confidence 444 4445677889999999999999999999974 3456777665544444555665442 223777
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CCCCCCCCHHHHHHHHHHHhhh---
Q 014922 304 NYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRD--- 374 (416)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~l~~--- 374 (416)
+|++|..+..+..++++++++.++++|.+++|.....+|..+.+++|.. +|+.+.||......+ .+..
T Consensus 534 ~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~---~l~~p~~ 610 (662)
T 2z3y_A 534 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYD---LMAQPIT 610 (662)
T ss_dssp EEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHH---HHHCCBC
T ss_pred EEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHH---HHhCcCc
Confidence 8887776666778899999999999999999865445788999999985 466667775432111 2222
Q ss_pred ---------cCCCCEEEeeccCCC---CchhHHHHHHHHHHHHHHHHhhh
Q 014922 375 ---------NGYQGLFLGGNYVAG---VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 375 ---------~~~~~l~~aG~~~~g---~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
.+.++|||||++++. .++++|+.||.+||++|+..+..
T Consensus 611 ~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 611 PGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp C---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 034799999998763 57899999999999999988754
No 16
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.93 E-value=5.7e-26 Score=233.84 Aligned_cols=240 Identities=14% Similarity=0.169 Sum_probs=182.6
Q ss_pred ceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC----CCCceEEecCEEEEcCChHHHHhc-----
Q 014922 154 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET----PEGLVSLRSRSVVMTVPSYVASSL----- 224 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~----~~g~~~~~ad~VI~a~p~~~~~~l----- 224 (416)
..++++|||++|+++|++.+ +|++|++|++|++++++ |+|++.+ .+| .+++||+||||+|+.++.++
T Consensus 563 ~~~~~~gG~~~L~~aLa~~l--~I~Lnt~V~~I~~~~~g-V~V~~~~~~~~~~g-~~i~AD~VIvTvPl~vLk~l~~~I~ 638 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRYTASG-CEVIAVNTRSTSQT-FIYKCDAVLCTLPLGVLKQQPPAVQ 638 (852)
T ss_dssp CCEEETTCTTHHHHHHTTTC--CEECSEEEEEEEEETTE-EEEEEEESSSTTCE-EEEEESEEEECCCHHHHHCSSCSSE
T ss_pred ceEEecCcHHHHHHHHHhCC--CEEeCCeEEEEEEcCCc-EEEEEeecccCCCC-eEEECCEEEECCCHHHHHhhhcccc
Confidence 35789999999999999977 89999999999999887 8888642 113 47999999999999999873
Q ss_pred cCCC-CHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEE
Q 014922 225 LRPL-SVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLL 303 (416)
Q Consensus 225 l~~~-~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~ 303 (416)
|.|. ++...++++++.|.++.||+|.|++++|+. +..++|++.+..+....++++|++. +..+|+
T Consensus 639 F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~------~~~~fG~l~~~~~~~~~l~~~~~~~--------~~pvLl 704 (852)
T 2xag_A 639 FVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP------SVNLFGHVGSTTASRGELFLFWNLY--------KAPILL 704 (852)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT------TCCEEEECCSSSTTTTTTCEEEECS--------SSSEEE
T ss_pred cCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC------CCCeeeeeccccCCCCceEEEecCC--------CCCEEE
Confidence 4444 445667889999999999999999999974 3456777665443333344555442 123777
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CCCCCCCCHHHHHHHHHHHhhh---
Q 014922 304 NYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRD--- 374 (416)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~l~~--- 374 (416)
+|++|..+..+..++++++++.++++|.+++|.....+|..+.+++|.. +|+.+.+|+...... .+..
T Consensus 705 ~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~---~L~~P~~ 781 (852)
T 2xag_A 705 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYD---LMAQPIT 781 (852)
T ss_dssp EEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHH---HTTSCBC
T ss_pred EEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHH---HHhCccc
Confidence 8887766556778899999999999999999865445789999999986 466667776432111 3332
Q ss_pred ---------cCCCCEEEeeccCC---CCchhHHHHHHHHHHHHHHHHhhhcc
Q 014922 375 ---------NGYQGLFLGGNYVA---GVALGRCVESAYEVASEVSNFLSQYA 414 (416)
Q Consensus 375 ---------~~~~~l~~aG~~~~---g~~~~~ai~sg~~aA~~il~~l~~~~ 414 (416)
.+.++|||||++++ ..++++|+.||.+||++|+..+.+..
T Consensus 782 ~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~ 833 (852)
T 2xag_A 782 PGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM 833 (852)
T ss_dssp CCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCG
T ss_pred cccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 02368999999875 35788999999999999999886554
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.93 E-value=4.3e-25 Score=217.76 Aligned_cols=245 Identities=13% Similarity=0.178 Sum_probs=179.5
Q ss_pred CceeehhhhHhHHHHHHHHHhc-cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHH
Q 014922 153 QTVGSFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVD 231 (416)
Q Consensus 153 ~~~~~~~gG~~~l~~~L~~~lg-~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~ 231 (416)
..+++++||+++|+++|++.++ ++|++|++|++|+.++++ |+|++...++.++++||+||+|+|+..+.++..+.++.
T Consensus 229 ~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~~~ 307 (489)
T 2jae_A 229 MMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEG-VTVEYTAGGSKKSITADYAICTIPPHLVGRLQNNLPGD 307 (489)
T ss_dssp SSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCHHHHTTSEECCCHH
T ss_pred ccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCe-EEEEEecCCeEEEEECCEEEECCCHHHHHhCccCCCHH
Confidence 4578999999999999999998 899999999999998887 88875321112478999999999999999886666667
Q ss_pred HHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCC
Q 014922 232 AAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATN 311 (416)
Q Consensus 232 ~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~ 311 (416)
..+.++++.|.++.+|++.|++++|++. ...+|.+... +.++..+.+++..++ .| ...++++|+++..+
T Consensus 308 ~~~~l~~~~~~~~~kv~l~~~~~~w~~~------~~~~g~~~~~--~~~~~~~~~~s~~~~--~~-~~~l~~~~~~g~~~ 376 (489)
T 2jae_A 308 VLTALKAAKPSSSGKLGIEYSRRWWETE------DRIYGGASNT--DKDISQIMFPYDHYN--SD-RGVVVAYYSSGKRQ 376 (489)
T ss_dssp HHHHHHTEECCCEEEEEEEESSCHHHHT------TCCCSCEEEE--SSTTCEEECCSSSTT--SS-CEEEEEEEEETHHH
T ss_pred HHHHHHhCCCccceEEEEEeCCCCccCC------CCcccccccC--CCCceEEEeCCCCCC--CC-CCEEEEEeeCCchh
Confidence 7888999999999999999999999642 1233322212 223455666664442 23 23455568876655
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCC------CCCCC------CCHHHHHHHHHHHhhhcCCCC
Q 014922 312 LGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQA------IPQFL------VGHLDLLDAAKSSLRDNGYQG 379 (416)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~------~p~~~------~g~~~~~~~~~~~l~~~~~~~ 379 (416)
..|..++++++++.++++|++++|.....+|.....++|.+. ++.+. +|... ...+.+.+ |.++
T Consensus 377 ~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~---~~~~~l~~-~~~~ 452 (489)
T 2jae_A 377 EAFESLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAAT---PEYEKLLE-PVDK 452 (489)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CC---HHHHHHTS-CBTT
T ss_pred hhhhcCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccch---hhHHHHhC-CCCc
Confidence 556678899999999999999997511245777778899854 22222 33221 23335666 7899
Q ss_pred EEEeeccC--CCCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 380 LFLGGNYV--AGVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 380 l~~aG~~~--~g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
|||||+++ .+.++++|+.||.+||++|+..+.+.
T Consensus 453 l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 453 IYFAGDHLSNAIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp EEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999876 47789999999999999999988764
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.92 E-value=1.2e-23 Score=207.99 Aligned_cols=239 Identities=17% Similarity=0.224 Sum_probs=175.4
Q ss_pred ceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCC-ceEEecCEEEEcCChHHHHhc-c-CCCCH
Q 014922 154 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG-LVSLRSRSVVMTVPSYVASSL-L-RPLSV 230 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g-~~~~~ad~VI~a~p~~~~~~l-l-~~~~~ 230 (416)
..++++||+++|+++|++.++.+|++|++|++|+.++++ |+|++.+.++ .++++||+||+|+|+..+.++ + ++.++
T Consensus 232 ~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~-v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~ 310 (498)
T 2iid_A 232 RFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQK-VTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLP 310 (498)
T ss_dssp CEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSC-EEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCH
T ss_pred ceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEECCCe-EEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCH
Confidence 467899999999999999998899999999999998887 8887643221 114799999999999999887 4 44555
Q ss_pred HHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCC
Q 014922 231 DAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGAT 310 (416)
Q Consensus 231 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~ 310 (416)
...++++++.|.++.+|++.|++++|+++ ...+ ++.... . +...+.|++. ..|+|..+|.+|+.+..
T Consensus 311 ~~~~ai~~l~~~~~~kv~l~~~~~~w~~~-----~~~~-~~~~~~-~--~~~~~~~~s~----~~p~g~~~L~~~~~g~~ 377 (498)
T 2iid_A 311 KKAHALRSVHYRSGTKIFLTCTTKFWEDD-----GIHG-GKSTTD-L--PSRFIYYPNH----NFTNGVGVIIAYGIGDD 377 (498)
T ss_dssp HHHHHHHHCCEECEEEEEEEESSCGGGGG-----TCCS-SEEEES-S--TTCEEECCSS----CCTTSCEEEEEEEEHHH
T ss_pred HHHHHHHhCCCcceeEEEEEeCCCCccCC-----CccC-CcccCC-C--CcceEEECCC----CCCCCCcEEEEEeCCcc
Confidence 67788899999999999999999999753 2211 222211 1 1223444432 23556778888876655
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCCCCC----CcEEEEEecCC------CCCCCCCCHHHHHHHHHHHhhhcCCCCE
Q 014922 311 NLGILSKKESELVEAVDRDLRKMLINPNAKD----PLVLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRDNGYQGL 380 (416)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~l~~~~~~~l 380 (416)
+..+..++++++.+.++++|++++|... .. +....+++|.. ++..+.++.... +.+.+.+ |.++|
T Consensus 378 a~~~~~~~~~~~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~---~~~~l~~-p~~~l 452 (498)
T 2iid_A 378 ANFFQALDFKDCADIVFNDLSLIHQLPK-KDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQH---FSDPLTA-SQGRI 452 (498)
T ss_dssp HHTTTTSCHHHHHHHHHHHHHHHHTCCH-HHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHH---HHHHHHC-CBTTE
T ss_pred HhhhhcCCHHHHHHHHHHHHHHHcCCCh-hhhhhhcCccEEEecCCCCCCCceeeecCCcchHH---HHHHHhC-CCCcE
Confidence 5557778999999999999999998432 11 12367889985 233345665433 3335666 78999
Q ss_pred EEeeccCC--CCchhHHHHHHHHHHHHHHHHhh
Q 014922 381 FLGGNYVA--GVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 381 ~~aG~~~~--g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
||||+++. ..++++|+.||.+||++|+..+.
T Consensus 453 ~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 453 YFAGEYTAQAHGWIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp EECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcccccCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 99998873 35789999999999999998874
No 19
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.90 E-value=1.8e-23 Score=214.11 Aligned_cols=236 Identities=15% Similarity=0.254 Sum_probs=176.6
Q ss_pred ceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHh--c-c-CCCC
Q 014922 154 TVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASS--L-L-RPLS 229 (416)
Q Consensus 154 ~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~--l-l-~~~~ 229 (416)
....+.+|++.++++|++.+ +|++|++|++|+.++++ |+|++ .+|. +++||+||+|+|+.++++ + + ++.+
T Consensus 525 ~~~~~~~G~~~l~~aLa~gl--~I~l~t~V~~I~~~~~~-v~V~~--~~G~-~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp 598 (776)
T 4gut_A 525 DHTLLTPGYSVIIEKLAEGL--DIQLKSPVQCIDYSGDE-VQVTT--TDGT-GYSAQKVLVTVPLALLQKGAIQFNPPLS 598 (776)
T ss_dssp CEEECTTCTHHHHHHHHTTS--CEESSCCEEEEECSSSS-EEEEE--TTCC-EEEESEEEECCCHHHHHTTCSEEESCCC
T ss_pred CeEEECChHHHHHHHHHhCC--cEEcCCeeEEEEEcCCE-EEEEE--CCCc-EEEcCEEEECCCHHHHhhcccccCCCCC
Confidence 45678999999999999866 89999999999998887 88874 5674 799999999999999976 2 4 4455
Q ss_pred HHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCC-CcEEEEEEecC
Q 014922 230 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPA-GRVLLLNYIGG 308 (416)
Q Consensus 230 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~-g~~~l~~~~~~ 308 (416)
+...+++.++.+.++.+|++.|+++||++... ....+|++.+..+...+.+++|+.. |+ +..+|..|++|
T Consensus 599 ~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~---g~~~fG~l~~~~~~~~~~~~~~d~~------p~g~~~vL~~~i~G 669 (776)
T 4gut_A 599 EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQ---GADFFGHVPPSASKRGLFAVFYDMD------PQKKHSVLMSVIAG 669 (776)
T ss_dssp HHHHHHHHHEEEECCEEEEEECSSCTTHHHHT---TCSEEEECCSSGGGTTEEEEEEESC------TTSCSCEEEEEECT
T ss_pred HHHHHHHHhCCCeeEEEEEEecCcccccccCC---CCceEEeecCCcCCCceEEEEecCC------CCCCceEEEEEecc
Confidence 56677888889999999999999999985311 2234555544333444555665442 22 34678888877
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCC------CCCCCCCHHHHHHHHHHHhhhcCC-CCEE
Q 014922 309 ATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQA------IPQFLVGHLDLLDAAKSSLRDNGY-QGLF 381 (416)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~l~~~~~-~~l~ 381 (416)
..+..+..++++++++.++++|.+++|.....+|..+.+++|... +..+.+|..... ...+.+ |+ ++||
T Consensus 670 ~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~---~~~L~~-p~~grL~ 745 (776)
T 4gut_A 670 EAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEA---YDIIAE-DIQGTVF 745 (776)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHH---HHHHHC-CBTTTEE
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhH---HHHHhC-cCCCcEE
Confidence 655556788999999999999999998654467889999999843 333344432211 113454 54 8999
Q ss_pred EeeccCC---CCchhHHHHHHHHHHHHHHH
Q 014922 382 LGGNYVA---GVALGRCVESAYEVASEVSN 408 (416)
Q Consensus 382 ~aG~~~~---g~~~~~ai~sg~~aA~~il~ 408 (416)
|||++++ ..++++|+.||.+||++|++
T Consensus 746 FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 746 FAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp ECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred EEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 9999886 35689999999999999974
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.88 E-value=3.2e-22 Score=198.39 Aligned_cols=242 Identities=16% Similarity=0.193 Sum_probs=158.7
Q ss_pred eehhhhHhHHHHHHHHHhc-cceecCceeeeEEEc-CCCceEEEEeCCCCceEEecCEEEEcCChHHHHh----------
Q 014922 156 GSFRKGLTMLPEAISKRLG-SKVKLSWKLSGVKKL-DSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASS---------- 223 (416)
Q Consensus 156 ~~~~gG~~~l~~~L~~~lg-~~I~l~~~V~~I~~~-~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~---------- 223 (416)
.+++| +++|+++|++.++ ++|++|++|++|..+ +++ |+|++ .+|+ +++||+||+|+|+..+..
T Consensus 196 ~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~-v~v~~--~~g~-~~~ad~VI~t~p~~~l~~~~~~~~~~~~ 270 (516)
T 1rsg_A 196 AFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKN-VTVNC--EDGT-VYNADYVIITVPQSVLNLSVQPEKNLRG 270 (516)
T ss_dssp EEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSC-EEEEE--TTSC-EEEEEEEEECCCHHHHHGGGSSCSCSTT
T ss_pred hhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCe-EEEEE--CCCc-EEECCEEEECCCHHHhhhcccccccccc
Confidence 35567 9999999999985 589999999999986 444 88874 5774 789999999999999963
Q ss_pred -c--cCCCCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccC------------
Q 014922 224 -L--LRPLSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSS------------ 288 (416)
Q Consensus 224 -l--l~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s------------ 288 (416)
+ .++.++...++++++.|.++.||++.|++++|+.+ ..++..+. ...+ ++. ..+..
T Consensus 271 ~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~------~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~ 341 (516)
T 1rsg_A 271 RIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNE------SSKIVTLA-NSTN-EFV-EIVRNAENLDELDSMLE 341 (516)
T ss_dssp CCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCS------CSEEEECC-CCCH-HHH-HHHHHCCSHHHHHHHC-
T ss_pred ceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCC------CCcEEEeC-CCCc-cch-hhcccCcccchhhhccc
Confidence 3 35555667889999999999999999999999742 12222221 1000 000 00000
Q ss_pred ----------CCC--CC-----CCCCCcEEEEEEecCCCCCCCCCC--CHHHHHHH---HHHHHHHHhCC----CCCC--
Q 014922 289 ----------SLF--PN-----RAPAGRVLLLNYIGGATNLGILSK--KESELVEA---VDRDLRKMLIN----PNAK-- 340 (416)
Q Consensus 289 ----------~~~--~~-----~~p~g~~~l~~~~~~~~~~~~~~~--~~~~~~~~---~~~~l~~~~~~----~~~~-- 340 (416)
..| |. ..+.|..+|.+|+.+..+..+..+ +++++.+. +++.|.+++|. ....
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~ 421 (516)
T 1rsg_A 342 REDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPI 421 (516)
T ss_dssp --------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC--
T ss_pred ccccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCc
Confidence 011 10 012244577788876644444455 77777554 66667666652 1111
Q ss_pred -------CCc--EEEEEecCC------CCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCC---CCchhHHHHHHHHH
Q 014922 341 -------DPL--VLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVA---GVALGRCVESAYEV 402 (416)
Q Consensus 341 -------~~~--~~~~~~w~~------~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~---g~~~~~ai~sg~~a 402 (416)
.|. .+.+++|.. +|..+.||.... .+.+.+...+.++|||||++++ ..++++|++||.+|
T Consensus 422 ~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~--~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~ra 499 (516)
T 1rsg_A 422 ENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPV--DMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRRE 499 (516)
T ss_dssp -----CCSCEEEEEEECCTTTCTTTTTCCCCCBC----C--HHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHH
T ss_pred ccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHH--HHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHH
Confidence 254 778889973 466667776321 1122343215689999999874 35689999999999
Q ss_pred HHHHHHHhhhc
Q 014922 403 ASEVSNFLSQY 413 (416)
Q Consensus 403 A~~il~~l~~~ 413 (416)
|++|+..+...
T Consensus 500 A~~i~~~~~~~ 510 (516)
T 1rsg_A 500 ATRISDLLKLE 510 (516)
T ss_dssp HHHHHHHHHGG
T ss_pred HHHHHHHhhhh
Confidence 99999987654
No 21
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.87 E-value=8.5e-21 Score=184.00 Aligned_cols=274 Identities=14% Similarity=0.135 Sum_probs=194.2
Q ss_pred CcHHHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCC
Q 014922 71 ESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKP 150 (416)
Q Consensus 71 ~s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (416)
.|+.+|+.+...++....++.+++.+.++.+++++|+..++..+.. .++.+..++ .
T Consensus 141 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~-~-------------------- 196 (431)
T 3k7m_X 141 IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAA---HHYSILGVV-L-------------------- 196 (431)
T ss_dssp SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHH---TTSCHHHHH-H--------------------
T ss_pred CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHh---cCCccceee-c--------------------
Confidence 9999999987777777788899999999999999999888766652 233332111 1
Q ss_pred CCCceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhc-cCC-C
Q 014922 151 KGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSL-LRP-L 228 (416)
Q Consensus 151 ~~~~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~l-l~~-~ 228 (416)
.... ++.+|++.+++++++.++ +|++|++|++|+.++++ ++|++ .+|. +++||+||+|+|++.+.++ +.| .
T Consensus 197 -~~~~-~~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~-v~v~~--~~g~-~~~ad~vi~a~~~~~l~~i~~~p~l 269 (431)
T 3k7m_X 197 -SLDE-VFSNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV-VNVTV--KDGH-AFQAHSVIVATPMNTWRRIVFTPAL 269 (431)
T ss_dssp -TCCE-EETTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS-EEEEE--TTSC-CEEEEEEEECSCGGGGGGSEEESCC
T ss_pred -chhh-hcCCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe-EEEEE--CCCC-EEEeCEEEEecCcchHhheeeCCCC
Confidence 1122 789999999999999988 99999999999998887 88874 5674 7999999999999999988 544 4
Q ss_pred CHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecC
Q 014922 229 SVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGG 308 (416)
Q Consensus 229 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~ 308 (416)
++...+++..+.+...++|.+.|+++++ + +. .. .+... ..+|+... ..++..++..++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~kv~~~~~~~~~--------~---i~-~~-~d~~~---~~~~~~~~----~~~~~~~l~~~~~g 329 (431)
T 3k7m_X 270 PERRRSVIEEGHGGQGLKILIHVRGAEA--------G---IE-CV-GDGIF---PTLYDYCE----VSESERLLVAFTDS 329 (431)
T ss_dssp CHHHHHHHHHCCCCCEEEEEEEEESCCT--------T---EE-EE-BSSSS---SEEEEEEE----CSSSEEEEEEEEET
T ss_pred CHHHHHHHHhCCCcceEEEEEEECCCCc--------C---ce-Ec-CCCCE---EEEEeCcC----CCCCCeEEEEEecc
Confidence 4555667777888888999999998753 1 11 11 11111 12222211 11345677777765
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCC------CCCCCCCCHHHHHHHHHHHhhhcCCCCEEE
Q 014922 309 ATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQ------AIPQFLVGHLDLLDAAKSSLRDNGYQGLFL 382 (416)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~ 382 (416)
.. +...+. + .+.+.|+++++. ..|..+..++|.. +++.+.||.... ..+.+.+ |.++|||
T Consensus 330 ~~---~~~~~~-~---~~~~~l~~~~~~---~~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~---~~~~l~~-p~g~~~f 395 (431)
T 3k7m_X 330 GS---FDPTDI-G---AVKDAVLYYLPE---VEVLGIDYHDWIADPLFEGPWVAPRVGQFSR---VHKELGE-PAGRIHF 395 (431)
T ss_dssp TT---CCTTCH-H---HHHHHHHHHCTT---CEEEEEECCCTTTCTTTSSSSCCCCTTTTTT---SSGGGGS-CBTTEEE
T ss_pred cc---CCCCCH-H---HHHHHHHHhcCC---CCccEeEecccCCCCCCCCCCCCcCCCCCcc---cHHHHhC-CCCcEEE
Confidence 43 222232 2 356677887753 2367777889974 466777886432 2235676 8899999
Q ss_pred eeccCC---CCchhHHHHHHHHHHHHHHHH
Q 014922 383 GGNYVA---GVALGRCVESAYEVASEVSNF 409 (416)
Q Consensus 383 aG~~~~---g~~~~~ai~sg~~aA~~il~~ 409 (416)
||+++. ..++++|++||.+||++|+..
T Consensus 396 AGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 396 VGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp CSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred EehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 997654 356899999999999999864
No 22
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.7e-22 Score=193.50 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=189.7
Q ss_pred ChhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCc--cccCCChhhHHHhhhcccCCCCCCCCCCCcHHHHHH
Q 014922 1 MLKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLP--IFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVR 78 (416)
Q Consensus 1 ~~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~--~~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~~~~l~ 78 (416)
++++++++|+-.. .....+++++|+++++|.+...+. ....+. .++++..+... +......++.|++||+.
T Consensus 74 ~~~~~~~~g~~~~-----~~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~~-~~~~~~~l~~~-~~~~~~~~~~s~~e~l~ 146 (399)
T 1v0j_A 74 VWDYVRQFTDFTD-----YRHRVFAMHNGQAYQFPMGLGLVSQFFGKYFT-PEQARQLIAEQ-AAEIDTADAQNLEEKAI 146 (399)
T ss_dssp HHHHHTTTCCBCC-----CCCCEEEEETTEEEEESSSHHHHHHHHTSCCC-HHHHHHHHHHH-GGGSCTTC----CCHHH
T ss_pred HHHHHHHhhhhhc-----cccceEEEECCEEEeCCCCHHHHHHHhcccCC-HHHHHHHHHHH-hhccCCCCcccHHHHHH
Confidence 3678999987321 112467889999999986532111 111112 23444222111 11112346789999999
Q ss_pred HhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCce-ee
Q 014922 79 RNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTV-GS 157 (416)
Q Consensus 79 ~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 157 (416)
+++|++.+++++.|++.++|+.+++++|+.++. .+.. ... . + .......+ .+
T Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~-~~~~---~~~-~-------------------~---~~~~~~~~~~~ 199 (399)
T 1v0j_A 147 SLIGRPLYEAFVKGYTAKQWQTDPKELPAANIT-RLPV---RYT-F-------------------D---NRYFSDTYEGL 199 (399)
T ss_dssp HHHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCS-CCCC---CSS-S-------------------C---CCSCCCSEEEC
T ss_pred HHHhHHHHHHHHHHHHHhhcCCChhhcChHhhh-ccee---Eec-c-------------------c---cchhhhhhccc
Confidence 999999999999999999999999999998762 1100 000 0 0 00001122 38
Q ss_pred hhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEE-ecCEEEEcCChHHHHhccCCCCHHHHhhh
Q 014922 158 FRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSL-RSRSVVMTVPSYVASSLLRPLSVDAAGAL 236 (416)
Q Consensus 158 ~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~-~ad~VI~a~p~~~~~~ll~~~~~~~~~~l 236 (416)
++||+++|+++|++.++++|++|++|++|... | + ++ +||+||+|+|++.+.++ .+
T Consensus 200 p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~~----v-------~---~~~~aD~VI~t~p~~~l~~~----------~l 255 (399)
T 1v0j_A 200 PTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQ----L-------R---PGSPAAPVVYTGPLDRYFDY----------AE 255 (399)
T ss_dssp BTTHHHHHHHHHTCSTTEEEECSCCHHHHHHH----H-------T---TTSTTCCEEECSCHHHHTTT----------TT
T ss_pred ccccHHHHHHHHHhcCCeEEEECCchhhhhhh----h-------h---hcccCCEEEECCcHHHHHhh----------hh
Confidence 89999999999999888899999999999742 2 1 24 69999999999988776 24
Q ss_pred cCCCCCCEEEEEEEecCCccccccccCCCCCcceEE-ecCCCCCceEEEEccCCCCCCCC-CCCcEEEEEEecCCCCCCC
Q 014922 237 SQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQL-HPRSQGVETLGTIYSSSLFPNRA-PAGRVLLLNYIGGATNLGI 314 (416)
Q Consensus 237 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~s~~~~~~~-p~g~~~l~~~~~~~~~~~~ 314 (416)
.+++|.++..+.+.++.+.+. +.+++ .|.. +.+...+++.++..+... |+++.+++......+
T Consensus 256 ~~l~y~s~~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~ri~~~~~~~~~~~~~~~~~~v~~e~~~~~---- 320 (399)
T 1v0j_A 256 GRLGWRTLDFEVEVLPIGDFQ----------GTAVMNYNDL-DVPYTRIHEFRHFHPERDYPTDKTVIMREYSRFA---- 320 (399)
T ss_dssp CCCCEEEEEEEEEEESSSCSS----------SSSEEEECCT-TSSCSEEEEGGGGCTTSCCCSSCEEEEEEEEEEC----
T ss_pred CCCCcceEEEEEEEEccccCC----------CCeEEEeCCC-CCCcceeEeecCCCCCCcCCCCCeEEEEeecccc----
Confidence 578898888889998865332 12222 3332 223334555444334444 445556655442110
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCC---CCEEEeecc--CCC
Q 014922 315 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGY---QGLFLGGNY--VAG 389 (416)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~---~~l~~aG~~--~~g 389 (416)
. + .-...+|.+.+++.+....++..+.. . ++|+|||.+ +.+
T Consensus 321 ~--------------------------~------~~~~~ypv~~~~~~~~~~~~~~~~~~--~~~~~~v~~~G~~~~~~~ 366 (399)
T 1v0j_A 321 E--------------------------D------DDEPYYPINTEADRALLATYRARAKS--ETASSKVLFGGRLGTYQY 366 (399)
T ss_dssp C--------------------------T------TSCCCEECCCHHHHHHHHHHHHHHHH--HHHHHCEEECHHHHHTCC
T ss_pred c--------------------------C------CCccccccCcHHHHHHHHHHHHHHHh--ccccCCEEEccceEEEEe
Confidence 0 0 00112555666676666666655542 3 699999975 667
Q ss_pred CchhHHHHHHHHHHHHHHHHh
Q 014922 390 VALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 390 ~~~~~ai~sg~~aA~~il~~l 410 (416)
.++++||.||.++|++|++..
T Consensus 367 ~~~e~~i~sa~~~a~~l~~~~ 387 (399)
T 1v0j_A 367 LDMHMAIASALNMYDNVLAPH 387 (399)
T ss_dssp CCHHHHHHHHHHHHHHTHHHH
T ss_pred cCHHHHHHHHHHHHHHHhhhh
Confidence 889999999999999998654
No 23
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.85 E-value=6.5e-21 Score=181.38 Aligned_cols=293 Identities=14% Similarity=0.091 Sum_probs=189.0
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCc--cccCCChhhHHHhhhcccCCCCCCCCCCCcHHHHHHH
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLP--IFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRR 79 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~--~~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~~~~l~~ 79 (416)
+++++++|+. .... ...+++++|+.+++|.+...+. ....++. ++++...... ... ...++.|++||+.+
T Consensus 70 ~~~~~~l~~~---~~~~--~~~~~~~~g~~~~~P~~~~~~~~l~~~~~~~-~~~~~~l~~~-~~~-~~~~~~sl~e~~~~ 141 (384)
T 2bi7_A 70 WNYVNKHAEM---MPYV--NRVKATVNGQVFSLPINLHTINQFFSKTCSP-DEARALIAEK-GDS-TIADPQTFEEEALR 141 (384)
T ss_dssp HHHHHTTSCE---EECC--CCEEEEETTEEEEESCCHHHHHHHTTCCCCH-HHHHHHHHHH-SCC-SCSSCCBHHHHHHH
T ss_pred HHHHHHHhhh---cccc--cceEEEECCEEEECCCChhHHHHHhcccCCH-HHHHHHHHHh-hhc-cCCCCcCHHHHHHH
Confidence 5788999862 2212 2356789999999987642221 1111222 2333222111 111 13578899999999
Q ss_pred hhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCceeehh
Q 014922 80 NLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFR 159 (416)
Q Consensus 80 ~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (416)
++|++++++++.|++.++|+.+++++|+.++. .+... .. . +.+ ...+....+++
T Consensus 142 ~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~-r~~~~---~~-~-------------------~~~--~~~~~~~~~p~ 195 (384)
T 2bi7_A 142 FIGKELYEAFFKGYTIKQWGMQPSELPASILK-RLPVR---FN-Y-------------------DDN--YFNHKFQGMPK 195 (384)
T ss_dssp HHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCC-SCCCC---SS-S-------------------CCC--SCCCSEEEEET
T ss_pred hhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHh-ccccc---cc-c-------------------ccc--cccccccEEEC
Confidence 99999999999999999999999999988752 11100 00 0 000 01122123899
Q ss_pred hhHhHHHHHHHHHhccceecCceee-eEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHHHHhhhcC
Q 014922 160 KGLTMLPEAISKRLGSKVKLSWKLS-GVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQ 238 (416)
Q Consensus 160 gG~~~l~~~L~~~lg~~I~l~~~V~-~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~ 238 (416)
||+++++++|++.++++|++|++|+ +|.. +||+||+|+|++.+.++ .+.+
T Consensus 196 gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~-------------------~~d~VI~a~p~~~~~~~----------~lg~ 246 (384)
T 2bi7_A 196 CGYTQMIKSILNHENIKVDLQREFIVEERT-------------------HYDHVFYSGPLDAFYGY----------QYGR 246 (384)
T ss_dssp THHHHHHHHHHCSTTEEEEESCCCCGGGGG-------------------GSSEEEECSCHHHHTTT----------TTCC
T ss_pred cCHHHHHHHHHhcCCCEEEECCeeehhhhc-------------------cCCEEEEcCCHHHHHHh----------hcCC
Confidence 9999999999998888999999999 7741 29999999999998876 2456
Q ss_pred CCCCCEEEEEEEecCCccccccccCCCCCcceEE-ecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCCCCCC
Q 014922 239 FYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQL-HPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSK 317 (416)
Q Consensus 239 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~ 317 (416)
++|.++..+.+.++ +.. .+.+++ .+. ++.+...+++.++..|...+ ++.+++.....
T Consensus 247 l~y~s~~~v~~~~d-~~~----------~~~~~~n~~~-~~~~~~ri~~~~~~~~~~~~-~~~~v~~e~~~--------- 304 (384)
T 2bi7_A 247 LGYRTLDFKKFTYQ-GDY----------QGCAVMNYCS-VDVPYTRITEHKYFSPWEQH-DGSVCYKEYSR--------- 304 (384)
T ss_dssp CCEEEEEEEEEEEE-SCS----------SSSSEEEECS-TTSSSSEEEEGGGGCTTSCC-SEEEEEEEEEE---------
T ss_pred CCcceEEEEEEEeC-CCC----------CCCEEEEecC-CCCCeeeEEEeeccCCCCCC-CCEEEEEEEec---------
Confidence 78998888888887 322 223332 332 22233334443433344432 33444443321
Q ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecC-CC---CCCCCCCHHHHHHHHHHHhhhcCCCCEEEeecc--CCCCc
Q 014922 318 KESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQ-QA---IPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNY--VAGVA 391 (416)
Q Consensus 318 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~-~~---~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~--~~g~~ 391 (416)
.|. .. +|++..++.+....+++.+. ..++|+|||.+ +.+.+
T Consensus 305 -------------------------------~~~~~~~p~ypv~~~~~~~~~~~~~~~~~--~~~~~~~~Gr~~~~~~~~ 351 (384)
T 2bi7_A 305 -------------------------------ACEENDIPYYPIRQMGEMALLEKYLSLAE--NETNITFVGRLGTYRYLD 351 (384)
T ss_dssp -------------------------------ECCTTCCCCEECCCHHHHHHHHHHHHHHT--TCSSEEECHHHHTTCCCC
T ss_pred -------------------------------cccCCCccccccCChhHHHHHHHHHHHHh--cCCCEEEccccEEEEeCC
Confidence 232 22 55566677777777766554 35899999975 55778
Q ss_pred hhHHHHHHHHHHHHHHHHhhh
Q 014922 392 LGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 392 ~~~ai~sg~~aA~~il~~l~~ 412 (416)
+++|+.||.++|++++..+..
T Consensus 352 ~~d~i~sa~~~a~~~~~~~~~ 372 (384)
T 2bi7_A 352 MDVTIAEALKTAEVYLNSLTE 372 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999987644
No 24
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.84 E-value=4.4e-21 Score=181.49 Aligned_cols=297 Identities=11% Similarity=0.062 Sum_probs=186.1
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCcc-ccCCChhhHHHhhhcccCCCCCCCCCCCcHHHHHHHh
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPI-FDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRRN 80 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~-~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~~~~l~~~ 80 (416)
+++++++|... . .. ....++.+|+.+++|.+...+.. ..... .++++...... .+.....++.|++||+.++
T Consensus 66 ~~~~~~l~~~~---~-~~-~~~~~~~~g~~~~~p~~~~~~~~l~~~~~-~~~~~~~l~~~-~~~~~~~~~~s~~~~~~~~ 138 (367)
T 1i8t_A 66 WDYVNDLVEFN---R-FT-NSPLAIYKDKLFNLPFNMNTFHQMWGVKD-PQEAQNIINAQ-KKKYGDKVPENLEEQAISL 138 (367)
T ss_dssp HHHHHTTSCBC---C-CC-CCCEEEETTEEEESSBSHHHHHHHHCCCC-HHHHHHHHHHH-TTTTCCCCCCSHHHHHHHH
T ss_pred HHHHHHhhhhh---h-cc-ccceEEECCeEEEcCCCHHHHHHHhccCC-HHHHHHHHHHH-hhccCCCCCccHHHHHHHH
Confidence 56788888632 1 11 23467889999999865322211 01111 22222222211 1122235788999999999
Q ss_pred hCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCceeehhh
Q 014922 81 LGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFRK 160 (416)
Q Consensus 81 ~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 160 (416)
+|++++++++.|++.++|+.+++++|+.++. .+.. .. . .+.+ ...+....+++|
T Consensus 139 ~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~-~l~~----~~-~------------------~~~~--~~~~~~~~~p~g 192 (367)
T 1i8t_A 139 VGEDLYQALIKGYTEKQWGRSAKELPAFIIK-RIPV----RF-T------------------FDNN--YFSDRYQGIPVG 192 (367)
T ss_dssp HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSC-CCCB----CS-S------------------SCCC--SCCCSEEECBTT
T ss_pred HhHHHHHHHHHHHHhhhhCCChHHcCHHHHh-hcee----ee-c------------------cccc--cccchhhcccCC
Confidence 9999999999999999999999999987652 1100 00 0 0000 001221238999
Q ss_pred hHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHHHHhhhcCCC
Q 014922 161 GLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQFY 240 (416)
Q Consensus 161 G~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~~~ 240 (416)
|+++|+++|++ +++|++|++|++|.. + | .+.||+||+|+|++.+.++ .+.+++
T Consensus 193 G~~~l~~~l~~--g~~i~l~~~V~~i~~---~-v-----------~~~~D~VV~a~p~~~~~~~----------~l~~l~ 245 (367)
T 1i8t_A 193 GYTKLIEKMLE--GVDVKLGIDFLKDKD---S-L-----------ASKAHRIIYTGPIDQYFDY----------RFGALE 245 (367)
T ss_dssp CHHHHHHHHHT--TSEEECSCCGGGSHH---H-H-----------HTTEEEEEECSCHHHHTTT----------TTCCCC
T ss_pred CHHHHHHHHhc--CCEEEeCCceeeech---h-h-----------hccCCEEEEeccHHHHHHH----------hhCCCC
Confidence 99999999998 569999999999862 1 2 1358999999999887654 355788
Q ss_pred CCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCCCCCCCHH
Q 014922 241 YPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKKES 320 (416)
Q Consensus 241 ~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~ 320 (416)
|.++..+.+.++.+.+ .+.+++...+++.++..+++.++..+.. .++++++..+... +.
T Consensus 246 y~s~~~v~~~~d~~~~----------~~~~~~~~~~~~~~~~ri~~~~~~~~~~--~~~~~v~~e~~~~----~~----- 304 (367)
T 1i8t_A 246 YRSLKFETERHEFPNF----------QGNAVINFTDANVPYTRIIEHKHFDYVE--TKHTVVTKEYPLE----WK----- 304 (367)
T ss_dssp EEEEEEEEEEESSSCS----------SSSSEEEECCTTSSCSEEEEGGGGSCCC--CSCEEEEEEEEEE----CC-----
T ss_pred CceEEEEEEEeccccC----------CCCeEEEeCCCCCceeeEEeecccCCCC--CCCEEEEEEEecc----cC-----
Confidence 9999999999987532 1233332223333444555555433432 2344554333111 00
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeecc--CCCCchhHHHHH
Q 014922 321 ELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNY--VAGVALGRCVES 398 (416)
Q Consensus 321 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~--~~g~~~~~ai~s 398 (416)
+ .-...+|.+.+++.+....+++.+.. .+||+|||.+ +.+.++++||.|
T Consensus 305 ---------------------~------~~~p~ypv~~~~~~~~~~~~~~~~~~--~~~~~~~Gr~~~~~y~~~~d~i~s 355 (367)
T 1i8t_A 305 ---------------------V------GDEPYYPVNDNKNMELFKKYRELASR--EDKVIFGGRLAEYKYYDMHQVISA 355 (367)
T ss_dssp ---------------------T------TSCCCEECCSHHHHHHHHHHHHHHHH--CTTEEECSTTTTTSCCCHHHHHHH
T ss_pred ---------------------C------CCeeecccCChhHHHHHHHHHHHHhc--CCCEEEcccceeeEecCHHHHHHH
Confidence 0 01122555556666666676665553 5899999975 667889999999
Q ss_pred HHHHHHHHHH
Q 014922 399 AYEVASEVSN 408 (416)
Q Consensus 399 g~~aA~~il~ 408 (416)
|.++|+++++
T Consensus 356 a~~~a~~~~~ 365 (367)
T 1i8t_A 356 ALYQVKNIMS 365 (367)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999999863
No 25
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.84 E-value=9.3e-20 Score=180.15 Aligned_cols=245 Identities=16% Similarity=0.087 Sum_probs=129.3
Q ss_pred eeehhhhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChHHHH-hccCCCC
Q 014922 155 VGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSYVAS-SLLRPLS 229 (416)
Q Consensus 155 ~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~~~~-~ll~~~~ 229 (416)
.++++||+++|+++|++.+ |++|++|++|++|..++++ ++ |+ +.+|+ ++.||+||+++++..+. .|+++..
T Consensus 213 ~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~-~~gV~--~~~g~-~~~ad~VV~~a~~~~~~~~Ll~~~~ 288 (501)
T 4dgk_A 213 VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNK-IEAVH--LEDGR-RFLTQAVASNADVVHTYRDLLSQHP 288 (501)
T ss_dssp EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTE-EEEEE--ETTSC-EEECSCEEECCC-------------
T ss_pred eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCe-EEEEE--ecCCc-EEEcCEEEECCCHHHHHHHhccccc
Confidence 5789999999999999876 6799999999999999887 54 65 46775 89999999999887664 5665432
Q ss_pred --HHHHhhhcCCCCC-CEEEEEEEecCCccccccccCCCCCcceE-EecCC-------------CCCceEEEEccCCCCC
Q 014922 230 --VDAAGALSQFYYP-PVAAVSVSYPKEAIRTECLIDGELKGFGQ-LHPRS-------------QGVETLGTIYSSSLFP 292 (416)
Q Consensus 230 --~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~~~~~~~~~~~~~-l~~~~-------------~~~~~~~~~~~s~~~~ 292 (416)
....+.+.+.+++ +..+++++++.+... .....+ +.++. ...+...+...|...|
T Consensus 289 ~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~--------l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp 360 (501)
T 4dgk_A 289 AAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQ--------LAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDS 360 (501)
T ss_dssp --------------CCEEEEEEEEESSCCTT--------SCSEEEEEECC-------------CCCEEEEEEECGGGTCG
T ss_pred cchhhhhhhhccccCCceeEEEecccCCccc--------cccceeccccchhhhccccccccccccCCceecccCCCCCC
Confidence 2344566666666 678889999875311 111111 11110 0112233444555566
Q ss_pred CCCCCCcEEEEEEecCCCCCCCCC----CCHHHHHHHHHHHHHHHh-CCCCCCCCcEEEEE---ecCCCCCC-----CCC
Q 014922 293 NRAPAGRVLLLNYIGGATNLGILS----KKESELVEAVDRDLRKML-INPNAKDPLVLGVR---VWQQAIPQ-----FLV 359 (416)
Q Consensus 293 ~~~p~g~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~---~w~~~~p~-----~~~ 359 (416)
..+|+|++.+.++...+.. .+.+ ...+++.+.+++.|++.+ +... ..++...+. .|...+.. |..
T Consensus 361 ~~ap~G~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~-~~i~~~~~~tP~~~~~~~~~~~G~~~g~ 438 (501)
T 4dgk_A 361 SLAPEGCGSYYVLAPVPHL-GTANLDWTVEGPKLRDRIFAYLEQHYMPGLR-SQLVTHRMFTPFDFRDQLNAYHGSAFSV 438 (501)
T ss_dssp GGSSTTCEEEEEEEEECCT-TTSCCCHHHHHHHHHHHHHHHHHHHTCTTHH-HHEEEEEEECTTTTC-------------
T ss_pred CcCCCCCceEEEEEecCcc-ccccccHHHHHHHHHHHHHHHHHHhhCCChH-HceEEEEECCHHHHHHHcCCCCccccCh
Confidence 7889999888777643221 1111 224567888888888755 3211 112222221 12221111 111
Q ss_pred CH-HHHHHHHHHHhhhcCCCCEEEeeccCC-CCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 360 GH-LDLLDAAKSSLRDNGYQGLFLGGNYVA-GVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 360 g~-~~~~~~~~~~l~~~~~~~l~~aG~~~~-g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.+ ......+|+....+|++|||+||++++ |.|+++|+.||+.||++|+++|...
T Consensus 439 ~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 439 EPVLTQSAWFRPHNRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp -----------------CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC--
T ss_pred hcchhhccccCCCCCCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhcCC
Confidence 11 011111233322227899999999886 7899999999999999999998554
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.83 E-value=5.8e-20 Score=177.76 Aligned_cols=278 Identities=14% Similarity=0.194 Sum_probs=179.6
Q ss_pred CCCCcHHHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCC
Q 014922 68 GHEESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRL 147 (416)
Q Consensus 68 ~~~~s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~ 147 (416)
.+++|+.+|+.++..++..+.++.|++.+.|+ +++++|+.+++..+. .. +++. ..
T Consensus 140 ~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~--------~~-~~~~-~~-------------- 194 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCEAARDLWINPFTAFGYG-HFDNVPAAYVLKYLD--------FV-TMMS-FA-------------- 194 (424)
T ss_dssp GGGSBHHHHHHHTTCGGGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSC--------HH-HHHH-HH--------------
T ss_pred hhccCHHHHHHhhCcHHHHHHHHHHHHhhccC-ChHhcCHHHHHHhhh--------Hh-hhhc-cc--------------
Confidence 34689999999987777888888999998885 678899887654332 11 1111 10
Q ss_pred CCCCCCceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCC
Q 014922 148 PKPKGQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRP 227 (416)
Q Consensus 148 ~~~~~~~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~ 227 (416)
.+ ..+++.||+++++++|++.++.+|++|++|++|+.++++ |+|+ +.+| +++||+||+|+|+..+.+++++
T Consensus 195 ---~~-~~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~-v~v~--~~~g--~~~ad~Vv~a~~~~~~~~~l~~ 265 (424)
T 2b9w_A 195 ---KG-DLWTWADGTQAMFEHLNATLEHPAERNVDITRITREDGK-VHIH--TTDW--DRESDVLVLTVPLEKFLDYSDA 265 (424)
T ss_dssp ---HT-CCBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEECCTTC-EEEE--ESSC--EEEESEEEECSCHHHHTTSBCC
T ss_pred ---CC-ceEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEEECCE-EEEE--ECCC--eEEcCEEEECCCHHHHhhccCC
Confidence 02 235789999999999999998899999999999988776 8876 4567 4899999999999998888765
Q ss_pred CCHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEE-EEccCCCCCCCCCCCcEEEEEEe
Q 014922 228 LSVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLG-TIYSSSLFPNRAPAGRVLLLNYI 306 (416)
Q Consensus 228 ~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~s~~~~~~~p~g~~~l~~~~ 306 (416)
.+..++.+.++.+.+.. +.+.+...+. . +..++|.+......+ .+|....++. +...++++|+
T Consensus 266 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~---~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~l~~~~ 329 (424)
T 2b9w_A 266 -DDDEREYFSKIIHQQYM-VDACLVKEYP--------T---ISGYVPDNMRPERLGHVMVYYHRWAD---DPHQIITTYL 329 (424)
T ss_dssp -CHHHHHHHTTCEEEEEE-EEEEEESSCC--------S---SEEECGGGGSGGGTTSCCEEEECCTT---CTTSCEEEEE
T ss_pred -CHHHHHHHhcCCcceeE-EEEEEeccCC--------c---ccccccCCCCCcCCCcceEEeeecCC---CCceEEEEEe
Confidence 35455566777776543 2223332221 1 122344321111110 1121222221 1234667777
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCC-----CCCHHHHHHHHHHHhhhcCCCCEE
Q 014922 307 GGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQF-----LVGHLDLLDAAKSSLRDNGYQGLF 381 (416)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~-----~~g~~~~~~~~~~~l~~~~~~~l~ 381 (416)
.+.. ..+...+++++.+.++++|.+ ++.. .+.......|.. .|.+ ..|+..... .+. ..++||
T Consensus 330 ~~~~-~~~~~~~~~~~~~~v~~~l~~-l~~~---~~~~~~~~~w~~-~p~~~~~~~~~G~~~~~~----~~~--~~~~l~ 397 (424)
T 2b9w_A 330 LRNH-PDYADKTQEECRQMVLDDMET-FGHP---VEKIIEEQTWYY-FPHVSSEDYKAGWYEKVE----GMQ--GRRNTF 397 (424)
T ss_dssp ECCB-TTBCCCCHHHHHHHHHHHHHH-TTCC---EEEEEEEEEEEE-EEECCHHHHHTTHHHHHH----HTT--TGGGEE
T ss_pred ccCC-CcccccChHHHHHHHHHHHHH-cCCc---ccccccccceee-eeccCHHHHhccHHHHHH----HHh--CCCCce
Confidence 6533 456677889999999999999 6532 112223345643 3333 233332222 222 357999
Q ss_pred EeeccCCCCchhHHHHHHHHHHHHHH
Q 014922 382 LGGNYVAGVALGRCVESAYEVASEVS 407 (416)
Q Consensus 382 ~aG~~~~g~~~~~ai~sg~~aA~~il 407 (416)
|||+|+.....++|+.||.+||++|+
T Consensus 398 ~aG~~~~~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 398 YAGEIMSFGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp ECSGGGSCSSHHHHHHHHHHHHHHHT
T ss_pred EeccccccccHHHHHHHHHHHHHHhc
Confidence 99999875567789999999999875
No 27
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.83 E-value=2.3e-20 Score=187.23 Aligned_cols=251 Identities=11% Similarity=0.018 Sum_probs=162.8
Q ss_pred CceeehhhhHhHHHHHHHHHh--ccceecCceee--eEEEcCCC------ceEEEEeCCCCc-eEEecCEEEEcCChHHH
Q 014922 153 QTVGSFRKGLTMLPEAISKRL--GSKVKLSWKLS--GVKKLDSG------EYSLTYETPEGL-VSLRSRSVVMTVPSYVA 221 (416)
Q Consensus 153 ~~~~~~~gG~~~l~~~L~~~l--g~~I~l~~~V~--~I~~~~~~------~v~v~~~~~~g~-~~~~ad~VI~a~p~~~~ 221 (416)
...+++.||+++|+++|++.+ +++|+++++|+ +|.+++++ .|+|++. .+|. ++++||+||+|+|++.+
T Consensus 337 ~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~-~~G~~~~~~aD~VIvTvP~~~L 415 (721)
T 3ayj_A 337 NEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYD-SHNAVHSEAYDFVILAVPHDQL 415 (721)
T ss_dssp CEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEE-TTCCEEEEEESEEEECSCHHHH
T ss_pred cceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEe-cCCceEEEEcCEEEECCCHHHH
Confidence 456899999999999999998 78999999999 99987543 3777653 4553 36899999999999998
Q ss_pred Hh------c-----------------------cCCC--C-------HHHHhhhcCCCCCCEEEEEEEe-----cCCcccc
Q 014922 222 SS------L-----------------------LRPL--S-------VDAAGALSQFYYPPVAAVSVSY-----PKEAIRT 258 (416)
Q Consensus 222 ~~------l-----------------------l~~~--~-------~~~~~~l~~~~~~~~~~v~l~~-----~~~~~~~ 258 (416)
.. + .+|. + +..++++++++|.+..||.+.| +++||++
T Consensus 416 ~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~ 495 (721)
T 3ayj_A 416 TPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQ 495 (721)
T ss_dssp HHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCE
T ss_pred hhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccc
Confidence 53 2 2332 3 4677899999999999999999 9999985
Q ss_pred ccccCCCCCcceEEecCCCCCceEEEEccC-CCCCCCCCCCc-EEEEEEecCCCCCCC------CCCCHHHH-------H
Q 014922 259 ECLIDGELKGFGQLHPRSQGVETLGTIYSS-SLFPNRAPAGR-VLLLNYIGGATNLGI------LSKKESEL-------V 323 (416)
Q Consensus 259 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s-~~~~~~~p~g~-~~l~~~~~~~~~~~~------~~~~~~~~-------~ 323 (416)
+. +. ..+... .+...... .++++ +..+ ..+++. .+|..|..+..+..+ ..+++++. +
T Consensus 496 ~~----g~-~i~~s~-TD~~~r~~-~~~p~p~~~d-~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~ 567 (721)
T 3ayj_A 496 WR----GE-PIKAVV-SDSGLAAS-YVVPSPIVED-GQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMY 567 (721)
T ss_dssp ET----TE-ECCEEE-ETTTTEEE-EEEECSCC-----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHH
T ss_pred cC----CC-Cceeee-cCCCcceE-EEeccCcccc-cCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHH
Confidence 30 00 011222 22221111 12111 1111 123333 455667655433233 33344444 9
Q ss_pred HHHHHHHH--HHhCCCC------------CCCCcEEEEEecCC-----CCCCCCCCHHHH---HHHHH--HHhhhcCCCC
Q 014922 324 EAVDRDLR--KMLINPN------------AKDPLVLGVRVWQQ-----AIPQFLVGHLDL---LDAAK--SSLRDNGYQG 379 (416)
Q Consensus 324 ~~~~~~l~--~~~~~~~------------~~~~~~~~~~~w~~-----~~p~~~~g~~~~---~~~~~--~~l~~~~~~~ 379 (416)
+.++++|+ ++++... ...+.+...++|.. ++..+.||.... ..++. ..+.+ +.++
T Consensus 568 ~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~-~~gr 646 (721)
T 3ayj_A 568 RTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAAS-LDNR 646 (721)
T ss_dssp HHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTT-TCCC
T ss_pred HHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccC-CCCC
Confidence 99999999 7776321 01134457889973 344567776321 12211 11233 5689
Q ss_pred EEEeeccCC--CCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 380 LFLGGNYVA--GVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 380 l~~aG~~~~--g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
|||||++++ +.|+++|+.||.+||..|+..+.+.
T Consensus 647 i~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 647 FFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp EEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEeehhhccCCceehHHHHHHHHHHHHHHHHhcCC
Confidence 999998764 6789999999999999999887653
No 28
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.81 E-value=6.5e-19 Score=164.85 Aligned_cols=227 Identities=16% Similarity=0.175 Sum_probs=173.1
Q ss_pred eeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHHHHh
Q 014922 155 VGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAG 234 (416)
Q Consensus 155 ~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~ 234 (416)
.+...+|++.+.++|++. .+|+++++|++|+.++++ |+|+ +.+|....+||.||+|+|+..+.+++.. .|....
T Consensus 102 ~~~~~~~~~~l~~~l~~g--~~i~~~~~v~~i~~~~~~-~~v~--~~~g~~~~~a~~vV~a~g~~~~~~~~~~-~~~l~~ 175 (336)
T 1yvv_A 102 RWVGKPGMSAITRAMRGD--MPVSFSCRITEVFRGEEH-WNLL--DAEGQNHGPFSHVIIATPAPQASTLLAA-APKLAS 175 (336)
T ss_dssp EEEESSCTHHHHHHHHTT--CCEECSCCEEEEEECSSC-EEEE--ETTSCEEEEESEEEECSCHHHHGGGGTT-CHHHHH
T ss_pred cEEcCccHHHHHHHHHcc--CcEEecCEEEEEEEeCCE-EEEE--eCCCcCccccCEEEEcCCHHHHHHhhcc-CHHHHH
Confidence 356678999999999884 499999999999998887 9887 4577533359999999999999998764 466677
Q ss_pred hhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCCC
Q 014922 235 ALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGI 314 (416)
Q Consensus 235 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~ 314 (416)
.+..+.|.++.++++.|++++|. +.. ++..+. ..++++|++..+|...+.+ ..+.++..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~----~~~~~l~~~~~~p~~~~~~-~~~v~~~~~~~~~~~ 241 (336)
T 1yvv_A 176 VVAGVKMDPTWAVALAFETPLQT-------PMQ--GCFVQD----SPLDWLARNRSKPERDDTL-DTWILHATSQWSRQN 241 (336)
T ss_dssp HHTTCCEEEEEEEEEEESSCCSC-------CCC--EEEECS----SSEEEEEEGGGSTTCCCSS-EEEEEEECHHHHHHT
T ss_pred HHhhcCccceeEEEEEecCCCCC-------CCC--eEEeCC----CceeEEEecCcCCCCCCCC-cEEEEEeCHHHHHHH
Confidence 88899999999999999988763 223 333332 1356777766666554432 345555543333445
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCCCCchhH
Q 014922 315 LSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGR 394 (416)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~g~~~~~ 394 (416)
..++++++.+.+++++.+++|.. ...|....+++|.+++|.+..++. .... +.++|++|||++.+.++++
T Consensus 242 ~~~~~~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~~a~~~~~~~~~--------~~~~-~~~rl~laGDa~~g~gv~~ 311 (336)
T 1yvv_A 242 LDASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAHEWG--------ALSD-ADLGIYVCGDWCLSGRVEG 311 (336)
T ss_dssp TTSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCCCCS--------CEEE-TTTTEEECCGGGTTSSHHH
T ss_pred HhCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEccccCccCCCCCCCCC--------eeec-CCCCEEEEecCCCCCCHHH
Confidence 67889999999999999999863 346788889999998888876642 1112 3589999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014922 395 CVESAYEVASEVSNFLS 411 (416)
Q Consensus 395 ai~sg~~aA~~il~~l~ 411 (416)
|+.||.++|+.|+..+.
T Consensus 312 a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 312 AWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.78 E-value=4.4e-19 Score=167.87 Aligned_cols=294 Identities=12% Similarity=0.061 Sum_probs=186.7
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCC--ccccCCChhhHHHhhhcccCCCCCCCCCCCcHHHHHHH
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDL--PIFDLMSIGGKIRAGLGALGLRPPPPGHEESVEEFVRR 79 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~--~~~~~l~~~~~lr~~~~~~~~~~~~~~~~~s~~~~l~~ 79 (416)
+++++++|... ... ...+++++|+++++|.+...+ +....++....... +.. .++...+++|++||+.+
T Consensus 95 ~~~~~~~~~~~----~~~-~~~~~~~~g~l~~lP~~~~~~~~l~~~~~~~~~~~~~-l~~---~~~~~~~~~s~~e~~~~ 165 (397)
T 3hdq_A 95 FEYLSRFTEWR----PYQ-HRVLASVDGQLLPIPINLDTVNRLYGLNLTSFQVEEF-FAS---VAEKVEQVRTSEDVVVS 165 (397)
T ss_dssp HHHHHTSCCEE----ECC-CBEEEEETTEEEEESCCHHHHHHHHTCCCCHHHHHHH-HHH---HCCCCSSCCBHHHHHHH
T ss_pred HHHHHHhhhcc----ccc-ccceEEECCEEEEcCCChHHHHHhhccCCCHHHHHHH-Hhh---cccCCCCCcCHHHHHHH
Confidence 67889998531 112 246888999999999764222 11112233222221 111 12334678999999999
Q ss_pred hhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCceeehh
Q 014922 80 NLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQTVGSFR 159 (416)
Q Consensus 80 ~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (416)
++|+++++++++|++.++|+.+++++|+.++. ++.. ..+ .+. ..+.+...++++
T Consensus 166 ~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~----~~~-------------------~d~--~yf~~~~qg~P~ 219 (397)
T 3hdq_A 166 KVGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPT----RTN-------------------RDN--RYFADTYQAMPL 219 (397)
T ss_dssp HHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCC----CSS-------------------CCC--BSCCCSEEEEET
T ss_pred hcCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCc----ccc-------------------cCc--cchhhhheeccC
Confidence 99999999999999999999999999998652 2210 000 000 011223235789
Q ss_pred hhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCCHHHHhhhcCC
Q 014922 160 KGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLSVDAAGALSQF 239 (416)
Q Consensus 160 gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~l~~~ 239 (416)
||+++|+++|++..|.+|++|++|+++ +. .+.||+||+|+|++.+-.. .+.++
T Consensus 220 gGy~~l~e~l~~~~g~~V~l~~~v~~~----------------~~-~~~~d~vI~T~P~d~~~~~----------~~g~L 272 (397)
T 3hdq_A 220 HGYTRMFQNMLSSPNIKVMLNTDYREI----------------AD-FIPFQHMIYTGPVDAFFDF----------CYGKL 272 (397)
T ss_dssp TCHHHHHHHHTCSTTEEEEESCCGGGT----------------TT-TSCEEEEEECSCHHHHTTT----------TTCCC
T ss_pred CCHHHHHHHHHhccCCEEEECCeEEec----------------cc-cccCCEEEEcCCHHHHHHH----------hcCCC
Confidence 999999999999888899999999843 11 3569999999999777321 35678
Q ss_pred CCCCEEEEEEEecCCccccccccCCCCCcceEE-ecCCCCCceEEEEccCCCCCCCCCCCcEEEEEEecCCCCCCCCCCC
Q 014922 240 YYPPVAAVSVSYPKEAIRTECLIDGELKGFGQL-HPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGATNLGILSKK 318 (416)
Q Consensus 240 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~ 318 (416)
.|.++..+.+.++.+.+ .+..++ .|+. . ++..++..++ |+.. +.++++++..++..
T Consensus 273 ~yrsl~~~~~~~~~~~~----------~~~~~vn~~d~-~-p~tRi~e~k~-~~~~-~~~~t~i~~Ey~~~--------- 329 (397)
T 3hdq_A 273 PYRSLEFRHETHDTEQL----------LPTGTVNYPND-Y-AYTRVSEFKH-ITGQ-RHHQTSVVYEYPRA--------- 329 (397)
T ss_dssp CEEEEEEEEEEESSSCS----------CSSSEEECSSS-S-SCSEEEEHHH-HHCC-CCSSEEEEEEEEES---------
T ss_pred CCceEEEEEEEeccccC----------CCCeEEEeCCC-C-cceEEEeecc-cCCC-CCCCEEEEEEECCC---------
Confidence 89999999999987543 233444 3333 3 5666665544 2322 33556666554210
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeec--cCCCCchhHHH
Q 014922 319 ESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGN--YVAGVALGRCV 396 (416)
Q Consensus 319 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~--~~~g~~~~~ai 396 (416)
+ .+| .||.+.....+....+++.... .++|+|+|- .+....+..+|
T Consensus 330 ----------------~----~~p----------yYpv~~~~~~~~~~~y~~~a~~--~~~v~~~GRlg~y~Y~~md~~i 377 (397)
T 3hdq_A 330 ----------------E----GDP----------YYPVPRPENAELYKKYEALADA--AQDVTFVGRLATYRYYNMDQVV 377 (397)
T ss_dssp ----------------S----SSC----------CEECCSHHHHHHHHHHHHHHHH--CTTEEECSTTTTTCCCCHHHHH
T ss_pred ----------------C----Ccc----------ccccCchhHHHHHHHHHHHHhc--CCCEEEcccceEEEeccHHHHH
Confidence 0 011 1555655455555555444332 589999993 23346678899
Q ss_pred HHHHHHHHHHHHHhhh
Q 014922 397 ESAYEVASEVSNFLSQ 412 (416)
Q Consensus 397 ~sg~~aA~~il~~l~~ 412 (416)
.+|..++++++..-++
T Consensus 378 ~~al~~~~~~~~~~~~ 393 (397)
T 3hdq_A 378 AQALATFRRLQGQPEQ 393 (397)
T ss_dssp HHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhcchhh
Confidence 9999999999876444
No 30
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.45 E-value=1.7e-12 Score=125.40 Aligned_cols=322 Identities=12% Similarity=0.072 Sum_probs=175.1
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhH--HHhhhcccC-CCCC-------CCCCCC
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGK--IRAGLGALG-LRPP-------PPGHEE 71 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~--lr~~~~~~~-~~~~-------~~~~~~ 71 (416)
.++++++|+.+.+.+.... ..+++.+|+.+.+|.+....+...++++.++ ++.++..+. +... ...+++
T Consensus 90 ~~ll~~lgl~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 168 (433)
T 1d5t_A 90 VKMLLYTEVTRYLDFKVVE-GSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNT 168 (433)
T ss_dssp HHHHHHHTGGGGCCEEECC-EEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTTCCTTTS
T ss_pred HHHHHHcCCccceEEEEeC-ceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhccccccccC
Confidence 4789999998755443332 3677889999999976322223334444332 111111110 1110 124689
Q ss_pred cHHHHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCC
Q 014922 72 SVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPK 151 (416)
Q Consensus 72 s~~~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (416)
|+.+|+++.+-.+.++.++...+....+.++.+.++...+..+..+....+ ...
T Consensus 169 s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~--------------------------~~g 222 (433)
T 1d5t_A 169 SMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLA--------------------------RYG 222 (433)
T ss_dssp BHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCC--------------------------SSS
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHH--------------------------hcC
Confidence 999999886544445555544333333345556565544333332111000 011
Q ss_pred CCceeehhhhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCC
Q 014922 152 GQTVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPL 228 (416)
Q Consensus 152 ~~~~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~ 228 (416)
+..+++++||++.++++|++.+ |++|+++++|++|..++++ +.+.. + +|+ ++.||+||+|+++... .+
T Consensus 223 ~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~-v~~v~-~-~g~-~~~ad~VV~a~~~~~~--~~--- 293 (433)
T 1d5t_A 223 KSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGK-VVGVK-S-EGE-VARCKQLICDPSYVPD--RV--- 293 (433)
T ss_dssp CCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTE-EEEEE-E-TTE-EEECSEEEECGGGCGG--GE---
T ss_pred CCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCE-EEEEE-E-CCe-EEECCEEEECCCCCcc--cc---
Confidence 2346799999999999998865 6899999999999988776 65322 2 563 7999999999988631 11
Q ss_pred CHHHHhhhcCCCCCCEEEEEEEecCCc-cccccccCCCCCcceEEecCCC--CCceEEEEccCCCCCCCCCCCcEEEEEE
Q 014922 229 SVDAAGALSQFYYPPVAAVSVSYPKEA-IRTECLIDGELKGFGQLHPRSQ--GVETLGTIYSSSLFPNRAPAGRVLLLNY 305 (416)
Q Consensus 229 ~~~~~~~l~~~~~~~~~~v~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~s~~~~~~~p~g~~~l~~~ 305 (416)
.++.. ....+++ ++++. +.. ......++++..+ ..+...+...| ..+..+|+|+.++.++
T Consensus 294 --------~~~~~-~~~~~~i-l~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~v~~~s-~d~~~aP~G~~~~~~~ 356 (433)
T 1d5t_A 294 --------RKAGQ-VIRIICI-LSHPIKNTN------DANSCQIIIPQNQVNRKSDIYVCMIS-YAHNVAAQGKYIAIAS 356 (433)
T ss_dssp --------EEEEE-EEEEEEE-ESSCCTTST------TCSSEEEEECGGGTTCSSCEEEEEEE-GGGTSSCTTCEEEEEE
T ss_pred --------cccCc-ceeEEEE-EcCcccccC------CCceEEEEeCccccCCCCCEEEEEEC-CCCcccCCCCEEEEEE
Confidence 11111 1222223 56543 110 0012223333211 11223333344 4566789999888877
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeec
Q 014922 306 IGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGN 385 (416)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~ 385 (416)
...+.. +.++- +...++++.+.. . ..+.+..+ +.+.. . . ...|||++++
T Consensus 357 ~~~p~~------~~~~~---l~~~~~~l~~~~--~--~~~~~~~~------~~~~~---------~-~--~~~~~~~~~~ 405 (433)
T 1d5t_A 357 TTVETT------DPEKE---VEPALGLLEPID--Q--KFVAISDL------YEPID---------D-G--SESQVFCSCS 405 (433)
T ss_dssp EECCSS------CHHHH---THHHHTTTCSCS--E--EEEEEEEE------EEESC---------C-S--TTTCEEECCC
T ss_pred EecCCC------CHHHH---HHHHHHHhhhHH--h--heecccee------eeecC---------C-C--CCCCEEECCC
Confidence 643321 22222 223333321110 1 12222221 11110 0 1 2368999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHH
Q 014922 386 YVAGVALGRCVESAYEVASEVS 407 (416)
Q Consensus 386 ~~~g~~~~~ai~sg~~aA~~il 407 (416)
+..+..+++|+.+++..-++|.
T Consensus 406 ~d~~~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 406 YDATTHFETTCNDIKDIYKRMA 427 (433)
T ss_dssp CCSCSBSHHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHHHh
Confidence 8888888999999998888875
No 31
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.42 E-value=5.1e-12 Score=122.81 Aligned_cols=319 Identities=13% Similarity=0.085 Sum_probs=169.8
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhHH--HhhhcccC-CCC-----CC--CCCCC
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKI--RAGLGALG-LRP-----PP--PGHEE 71 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~l--r~~~~~~~-~~~-----~~--~~~~~ 71 (416)
.++++++|+.+.+.+.... ..+++.+|+.+++|.+....+...++++.++. +.++..+. +.. +. ..++.
T Consensus 98 ~~ll~~lg~~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 176 (453)
T 2bcg_G 98 TNILIHTDVTRYVDFKQVS-GSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKN 176 (453)
T ss_dssp HHHHHHHTGGGTCCEEECC-CEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGGSTTCCTTTS
T ss_pred HHHHHhcCCccceEEEEcc-ceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchhhhccccccC
Confidence 4788999997655443332 46778899999999762222233444543332 11111110 110 00 24688
Q ss_pred cHHHHHHHhhCHHHHHHhhhhhhcc----cccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCC
Q 014922 72 SVEEFVRRNLGDEVFERLIEPFCSG----VYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRL 147 (416)
Q Consensus 72 s~~~~l~~~~g~~~~~~~~~p~~~~----~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~ 147 (416)
|+.+|+++.+-.+.+..++...+.. .|...+...++..+..++.. +.. .
T Consensus 177 s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s-----------~~~-~--------------- 229 (453)
T 2bcg_G 177 TMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQS-----------VAR-Y--------------- 229 (453)
T ss_dssp BHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHH-----------HHH-H---------------
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHH-----------HHh-h---------------
Confidence 9999998764444444454322211 12223333332211111110 000 0
Q ss_pred CCCCCCceeehhhhHhHHHHHHHHHh---ccceecCceeeeEEEc--CCCceEEEEeCCCCceEEecCEEEEcCChHHHH
Q 014922 148 PKPKGQTVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKL--DSGEYSLTYETPEGLVSLRSRSVVMTVPSYVAS 222 (416)
Q Consensus 148 ~~~~~~~~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~--~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~ 222 (416)
.+..+.+++||++.|+++|++.+ |++|+++++|++|..+ +++.+.|+ + +|. ++.||+||+|+++..-
T Consensus 230 ---~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~--~-~g~-~~~ad~VV~a~~~~~~- 301 (453)
T 2bcg_G 230 ---GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVK--T-KLG-TFKAPLVIADPTYFPE- 301 (453)
T ss_dssp ---SSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEE--E-TTE-EEECSCEEECGGGCGG-
T ss_pred ---cCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEE--E-CCe-EEECCEEEECCCccch-
Confidence 11234589999999999999876 7899999999999987 55422454 3 453 7899999999987511
Q ss_pred hccCCCCHHHHhhhcCCC-CCCEEEEEEEecCCccccccccCCCCCcceEEecCCC--CCceEEEEccCCCCCCCCCCCc
Q 014922 223 SLLRPLSVDAAGALSQFY-YPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQ--GVETLGTIYSSSLFPNRAPAGR 299 (416)
Q Consensus 223 ~ll~~~~~~~~~~l~~~~-~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~s~~~~~~~p~g~ 299 (416)
.+.+.. + +...+++ ++++.-... ....+.++++..+ ..+..-+...+. .+..+|+|+
T Consensus 302 ------------~l~~~~~~-~~~~~~i-~~~~~~~~~-----~~~~~~ii~~~~~~~~~~~~~v~~~s~-~d~~aP~G~ 361 (453)
T 2bcg_G 302 ------------KCKSTGQR-VIRAICI-LNHPVPNTS-----NADSLQIIIPQSQLGRKSDIYVAIVSD-AHNVCSKGH 361 (453)
T ss_dssp ------------GEEEEEEE-EEEEEEE-ESSCCTTST-----TCSSEEEEECGGGTTCSSCEEEEEEEG-GGTSSCTTC
T ss_pred ------------hhcccCCc-ceeEEEE-EccccCCCC-----CCccEEEEeCccccCCCCCEEEEEeCC-CCCCCCCCc
Confidence 111112 2 1222333 666531000 1112233333211 112222322332 336789999
Q ss_pred EEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCC
Q 014922 300 VLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQG 379 (416)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~ 379 (416)
.++.+++..+. .+.++-++ ..++++.+. .-..+...++. .+-. . . ...|
T Consensus 362 ~~~~v~~~~~~------~~~~~~l~---~~~~~l~~~----~~~~~~~~~~~------~~~~---------~-~--~~~~ 410 (453)
T 2bcg_G 362 YLAIISTIIET------DKPHIELE---PAFKLLGPI----EEKFMGIAELF------EPRE---------D-G--SKDN 410 (453)
T ss_dssp EEEEEEEECCS------SCHHHHTH---HHHGGGCSC----SEEEEEEEEEE------EESS---------C-S--TTTS
T ss_pred EEEEEEEecCC------CCHHHHHH---HHHHHhhhH----HHhhccchhee------eecC---------C-C--CCCC
Confidence 98888775432 12222223 333332221 11222333211 1110 0 1 2378
Q ss_pred EEEeeccCCCCchhHHHHHHHHHHHHHH
Q 014922 380 LFLGGNYVAGVALGRCVESAYEVASEVS 407 (416)
Q Consensus 380 l~~aG~~~~g~~~~~ai~sg~~aA~~il 407 (416)
||++|++..+..+++|+.++++++++|.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 411 IYLSRSYDASSHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp EEECCCCCSCSBSHHHHHHHHHHHHHHH
T ss_pred EEECCCCCccccHHHHHHHHHHHHHHHH
Confidence 9999999888889999999999999997
No 32
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.30 E-value=7.2e-11 Score=117.24 Aligned_cols=254 Identities=12% Similarity=0.066 Sum_probs=148.4
Q ss_pred hhHHHhcCCCCceeeCCCCCCceEEECCeeeeCCCCCCCCccccCCChhhHHHhhhc--c-cCCC--C--CCCCCCCcHH
Q 014922 2 LKMVVDSGLKDDLVLGDPNAPRFVLWNGRLRPVPSSPTDLPIFDLMSIGGKIRAGLG--A-LGLR--P--PPPGHEESVE 74 (416)
Q Consensus 2 ~~l~~elGl~~~l~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~--~-~~~~--~--~~~~~~~s~~ 74 (416)
.+|+.++|+.+.+.+..-. ..|++.+|+++.+|.+...++..+.|++.+|.++..- . ..+. + +...+..|+.
T Consensus 240 v~LL~~sgV~~yLEFk~v~-~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~~p~~~~~~d~~S~~ 318 (650)
T 1vg0_A 240 IDLLIKSNVSRYAEFKNIT-RILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFS 318 (650)
T ss_dssp HHHHHHHTGGGGCCEEECC-EEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGGCHHHHHTTTTSBHH
T ss_pred HHHHHHcCCcceeeEEEcc-ceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhccChHHHhhhccCCHH
Confidence 5789999998888775432 3677788899999987666666789998887653321 0 0011 1 1135789999
Q ss_pred HHHHHhhCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCCCCCCCCCCCCCCCc
Q 014922 75 EFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPKQPRDPRLPKPKGQT 154 (416)
Q Consensus 75 ~~l~~~~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (416)
+|+++.+..+.++.++...+ ++++.+. .++...+..+..+....+ .+.+..
T Consensus 319 d~L~~~~ls~~L~~~L~~~l-al~~~~~--~pa~~~l~~i~~~l~sl~--------------------------~yg~sg 369 (650)
T 1vg0_A 319 EYLKTQKLTPNLQYFVLHSI-AMTSETT--SCTVDGLKATKKFLQCLG--------------------------RYGNTP 369 (650)
T ss_dssp HHHTTSSSCHHHHHHHHHHT-TC--CCS--CBHHHHHHHHHHHHHHTT--------------------------SSSSSS
T ss_pred HHHHHhCCCHHHHHHHHHHH-hccCCCC--CchhHHHHHHHHHHHHHH--------------------------hhccCc
Confidence 99998754444445543322 3333322 233333333321111011 011234
Q ss_pred eeehhhhHhHHHHHHHHHh---ccceecCceeeeEEEcC--CCceEEEEeCCCCceEEecCEEEEcCChHHHHhccCCCC
Q 014922 155 VGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLD--SGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSLLRPLS 229 (416)
Q Consensus 155 ~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~--~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~ll~~~~ 229 (416)
+++++||++.|+++|++.+ |++|+++++|++|..++ ++ ++... ..+|+ ++.||+||++ +.. ++..
T Consensus 370 ~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~-v~gV~-~~~Ge-~i~A~~VVs~--~~~----lp~~- 439 (650)
T 1vg0_A 370 FLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRK-CKAVI-DQFGQ-RIISKHFIIE--DSY----LSEN- 439 (650)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCC-EEEEE-ETTSC-EEECSEEEEE--GGG----BCTT-
T ss_pred eEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCe-EEEEE-eCCCC-EEEcCEEEEC--hhh----cCHh-
Confidence 6899999999999997765 78999999999999876 54 54332 35675 8999999993 222 2211
Q ss_pred HHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcce-EEecCCC-CCceEEEEccCCCCCCCCCCCcEEEEEEe
Q 014922 230 VDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFG-QLHPRSQ-GVETLGTIYSSSLFPNRAPAGRVLLLNYI 306 (416)
Q Consensus 230 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~~s~~~~~~~p~g~~~l~~~~ 306 (416)
. ..++.+..+.++.+.++++.-... .....+ .++|..+ ..+..-++..|. .+..+|+|..++.+..
T Consensus 440 --~---~~~~~~~~v~R~i~i~~~pi~~~~-----~~~~~~~iiiP~~~g~~~~V~i~~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 440 --T---CSRVQYRQISRAVLITDGSVLRTD-----ADQQVSILTVPAEEPGSFAVRVIELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp --T---TTTCCCEEEEEEEEEESSCSSCCS-----CCCCCEEEEECCSSTTSCCEEEEEECG-GGTSSCTTCEEEEEEE
T ss_pred --H---hccccccceEEEEEEecCCCCCcC-----CCcceEEEEccCccCCCCCEEEEEeCC-CCCCCCCCCEEEEEEe
Confidence 1 112345567888888888642110 110123 2345443 122222322333 5567899987776543
No 33
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.27 E-value=7.7e-12 Score=120.60 Aligned_cols=187 Identities=14% Similarity=0.056 Sum_probs=125.6
Q ss_pred ChhHHHhcCCCCceeeCCCCCCceEEE---------CCeeeeCCCCCCCCccccCCChhhHHHhhhc--ccC-CCC----
Q 014922 1 MLKMVVDSGLKDDLVLGDPNAPRFVLW---------NGRLRPVPSSPTDLPIFDLMSIGGKIRAGLG--ALG-LRP---- 64 (416)
Q Consensus 1 ~~~l~~elGl~~~l~~~~~~~~~~i~~---------~g~~~~~p~~~~~~~~~~~l~~~~~lr~~~~--~~~-~~~---- 64 (416)
+++++.++|+.+.+.|.... ..|++. +|+++++|.+...++.++.+++.+|.+...- .+. +..
T Consensus 102 L~~lL~~~gv~~ylef~~~~-~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~~~~~ 180 (475)
T 3p1w_A 102 LVKILKKTRVTNYLEWLVVE-GSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDANKRN 180 (475)
T ss_dssp HHHHHHHTTCGGGSCEEECS-EEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCTTCGG
T ss_pred HHHHHHHCCchheeEEEecC-cceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhhccch
Confidence 36789999999998886653 356665 6789999987666667789999988774321 111 111
Q ss_pred -CC--CCCCCcHHHHHHHh-hCHHHHHHhhhhhhcccccCCcchhhHHHhhHHHHHHHHhcCChHHHHHHHHHhhccCCC
Q 014922 65 -PP--PGHEESVEEFVRRN-LGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQTGGSIIGGTFKAIQEKNKAPK 140 (416)
Q Consensus 65 -~~--~~~~~s~~~~l~~~-~g~~~~~~~~~p~~~~~~~~~~~~lS~~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~ 140 (416)
+. ..++.|+.+|+++. +.+...+.++.++.-.. ..+..+.|+..++.++..+.. |+ ..
T Consensus 181 ~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~---Sl----~~---------- 242 (475)
T 3p1w_A 181 TWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQ---SI----SA---------- 242 (475)
T ss_dssp GSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHH---HH----HH----------
T ss_pred hhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHH---HH----hh----------
Confidence 11 13578999999873 55666665544443222 234555677777776653311 11 11
Q ss_pred CCCCCCCCCCCCCceeehhhhHhHHHHHHHHHh---ccceecCceeeeEEE-cCCCceEEEEeCCCCceEEecCEEEEcC
Q 014922 141 QPRDPRLPKPKGQTVGSFRKGLTMLPEAISKRL---GSKVKLSWKLSGVKK-LDSGEYSLTYETPEGLVSLRSRSVVMTV 216 (416)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~-~~~~~v~v~~~~~~g~~~~~ad~VI~a~ 216 (416)
+.+..+.+++||++.|+++|++.+ |++|+++++|++|.. ++++.+.|+ +.+|+ +++||+||++.
T Consensus 243 ---------yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~--~~~G~-~i~Ad~VI~a~ 310 (475)
T 3p1w_A 243 ---------FGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIK--SSDGE-IAYCDKVICDP 310 (475)
T ss_dssp ---------HSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEE--ETTSC-EEEEEEEEECG
T ss_pred ---------cCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEE--ECCCc-EEECCEEEECC
Confidence 112356799999999999998876 689999999999998 555434465 45774 79999999998
Q ss_pred Ch
Q 014922 217 PS 218 (416)
Q Consensus 217 p~ 218 (416)
..
T Consensus 311 ~~ 312 (475)
T 3p1w_A 311 SY 312 (475)
T ss_dssp GG
T ss_pred Cc
Confidence 54
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.11 E-value=3.9e-11 Score=100.81 Aligned_cols=111 Identities=13% Similarity=0.070 Sum_probs=83.1
Q ss_pred CCc-EEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCCcEE--EEEecCC------CCCCCCCCHHHHHHH
Q 014922 297 AGR-VLLLNYIGGATNLGILSKKESELVEAVDRDLRKMLINPNAKDPLVL--GVRVWQQ------AIPQFLVGHLDLLDA 367 (416)
Q Consensus 297 ~g~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~w~~------~~p~~~~g~~~~~~~ 367 (416)
+|. .+|.+|+.+..+..+..++++++++.++++|++++|.. ...+..+ .+++|.. ++..+.||......
T Consensus 33 ~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~-~~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~- 110 (181)
T 2e1m_C 33 TQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRR-IEVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFH- 110 (181)
T ss_dssp CSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGG-GGGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHH-
T ss_pred CCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCC-cHhhccCcceecccCCCCCCCCcccCcCCCchHHHH-
Confidence 344 57788886665555667889999999999999999743 2223356 8899974 24556788764432
Q ss_pred HHHHhhhcCCCCEEEeeccCC--CCchhHHHHHHHHHHHHHHHHhhh
Q 014922 368 AKSSLRDNGYQGLFLGGNYVA--GVALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 368 ~~~~l~~~~~~~l~~aG~~~~--g~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
+.+.+ |.++|||||+++. ..++++|++||.+||++|+..+..
T Consensus 111 --~~l~~-p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 111 --LDVVR-PEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp --HHHHS-CBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred --HHHhC-CCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 35666 7899999999876 567899999999999999987643
No 35
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.21 E-value=1.5e-06 Score=67.65 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=59.3
Q ss_pred EEecCEEEEcCChHHHHhc-cCCC-CHHHHhhhcCCCCCCEEEEEEEecCCccccccccCCCCCcceEEecCCCCCceEE
Q 014922 206 SLRSRSVVMTVPSYVASSL-LRPL-SVDAAGALSQFYYPPVAAVSVSYPKEAIRTECLIDGELKGFGQLHPRSQGVETLG 283 (416)
Q Consensus 206 ~~~ad~VI~a~p~~~~~~l-l~~~-~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 283 (416)
+++||+||||+|+.++..+ |.|. ++...++++++.|.+..|+.+.|+++||+++ +..+..
T Consensus 5 ~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~--------~~~gd~---------- 66 (130)
T 2e1m_B 5 TWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFT--------EADWKR---------- 66 (130)
T ss_dssp EEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCC--------HHHHHH----------
T ss_pred EEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCC--------Cccccc----------
Confidence 7899999999999999988 6554 4566788899999999999999999999752 111100
Q ss_pred EEccCCCCCCCCCCCcEEEEEEec-CCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Q 014922 284 TIYSSSLFPNRAPAGRVLLLNYIG-GATNLGILSKKESELVEAVDRDLRKMLIN 336 (416)
Q Consensus 284 ~~~~s~~~~~~~p~g~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 336 (416)
+ .+ +.+..++.+|++ |..+..|..+++ +..+.++..|.+++|.
T Consensus 67 ----s--~~---~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 67 ----E--LD---AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp ----H--HH---HHSTTHHHHHHHHCCCSCCCC---------------------
T ss_pred ----c--CC---CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 0 00 011236667774 777777777766 5577888889888873
No 36
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.75 E-value=5.3e-05 Score=70.85 Aligned_cols=61 Identities=20% Similarity=0.247 Sum_probs=42.1
Q ss_pred CCceeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcC
Q 014922 152 GQTVGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTV 216 (416)
Q Consensus 152 ~~~~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~ 216 (416)
+.+++.+.||+++|+++|++.++.+|++|++|++|.+.+++ +.|... +. .....-+|.+.+
T Consensus 309 ~~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~g-v~v~~~--~~-~~~~g~~~~~~~ 369 (376)
T 2e1m_A 309 RATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPG-RDGHHG--EL-TGPGGPAVAIQT 369 (376)
T ss_dssp TCCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC-----------------CCEEEEE
T ss_pred CCceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCc-eEEEeC--CC-cCCCCCeeEEEe
Confidence 34578999999999999999999999999999999999887 666432 22 133455666654
No 37
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.64 E-value=6.4e-05 Score=66.82 Aligned_cols=88 Identities=15% Similarity=0.187 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEEecCCCCCCCCCCHHHHHHHHHHHhhhcCCCCEEEeeccCCCCchhHH
Q 014922 316 SKKESELVEAVDRDLRKMLINPNAKDPLVLGVRVWQQAIPQFLVGHLDLLDAAKSSLRDNGYQGLFLGGNYVAGVALGRC 395 (416)
Q Consensus 316 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~p~~~~g~~~~~~~~~~~l~~~~~~~l~~aG~~~~g~~~~~a 395 (416)
.....+..+.....+....+.. ...+.....++|.++.|....... .... ..++|++|||++.|.+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~a~~~~~~~~~--------~~~~-~~~~v~l~GDa~~g~gv~~A 312 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLYARPAGAHEWG--------ALSD-ADLGIYVCGDWCLSGRVEGA 312 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEEEEESSCCCCS--------SEEE-TTTTEEECCGGGTTSSHHHH
T ss_pred cccchhhhhhhhhhhhhhccCC-cCcchheeccceeecccccccCcc--------ceee-CCCCEEEEecccCCcCHHHH
Confidence 3445566666777777766543 356778888999876654433211 1122 34899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 014922 396 VESAYEVASEVSNFLSQY 413 (416)
Q Consensus 396 i~sg~~aA~~il~~l~~~ 413 (416)
+.||+.||+.|++.|++.
T Consensus 313 ~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 313 WLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp HHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 999999999999998764
No 38
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.38 E-value=0.087 Score=51.67 Aligned_cols=53 Identities=19% Similarity=0.318 Sum_probs=39.8
Q ss_pred HhccceecCceeeeEEEcCC----CceEEEEeCCCCceEEecCEEEEcCChH-HHHhcc
Q 014922 172 RLGSKVKLSWKLSGVKKLDS----GEYSLTYETPEGLVSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~----~~v~v~~~~~~g~~~~~ad~VI~a~p~~-~~~~ll 225 (416)
..|.+|+++++|++|+.+++ + |+|++.+.+|..+++||.||.|.-.. .+++.+
T Consensus 132 ~~gv~i~~~~~v~~i~~~~~~~~~~-v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 132 KHGGAIRFGTRLLSFRQHDDDAGAG-VTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HTTCEEESSCEEEEEEEECGGGCSE-EEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred hCCCEEEeCCEEEEEEECCCCcccc-EEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 34779999999999999877 6 88876544433589999999998663 445544
No 39
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.46 E-value=0.2 Score=46.56 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=41.1
Q ss_pred hhHhHHHHHHHHHhccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH-HHHhc
Q 014922 160 KGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY-VASSL 224 (416)
Q Consensus 160 gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~-~~~~l 224 (416)
.-+..+....+...|.+++++++|+.+..++++ +. +.....++..+++||.||-|--.. .+++.
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~-~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~ 167 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKENGK-VAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEETTE-EEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeeeccce-eeeeeecccccceEEEEeEEEeCCccccHHHHH
Confidence 344444444444567899999999999988776 43 333222323468999999997553 34443
No 40
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=94.56 E-value=0.045 Score=50.86 Aligned_cols=53 Identities=13% Similarity=0.284 Sum_probs=42.2
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 220 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~ 220 (416)
..+..+|.+.+ |++|+++++|++|+.++++ +.|+ +.+| ++.||+||+|+....
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~--t~~g--~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVR--CDAG--SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEE--CSSE--EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEE--eCCC--EEEcCEEEECCChhH
Confidence 45666666654 6799999999999998876 8776 5666 789999999998743
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.58 E-value=0.11 Score=49.51 Aligned_cols=53 Identities=11% Similarity=0.067 Sum_probs=41.8
Q ss_pred hHHHHHHHHHh---ccceecCc---eeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSW---KLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~---~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
..+.++|.+.+ |++|++++ +|++|..++++ |+ |+ +.+|. +++||.||+|+...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~-v~gV~--t~~G~-~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENND-VKGAV--TADGK-IWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTE-EEEEE--ETTTE-EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCe-EEEEE--ECCCC-EEECCEEEECCCCC
Confidence 45666666654 68999999 99999988776 66 75 46774 79999999999876
No 42
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.41 E-value=0.11 Score=52.73 Aligned_cols=53 Identities=13% Similarity=0.173 Sum_probs=42.3
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
..+..+|.+.+ |.+|+++++|++|..++++ |.|+ +.+|. ++.||.||+|+...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~--t~~G~-~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-WLLN--FAGDQ-QATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEE--ETTSC-EEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-EEEE--ECCCC-EEECCEEEECCCcc
Confidence 45667776654 6799999999999998886 8776 45654 79999999999775
No 43
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.22 E-value=0.16 Score=46.66 Aligned_cols=55 Identities=15% Similarity=0.157 Sum_probs=41.7
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~~ 219 (416)
..+.++|.+.+ |.+|+++++|++|+.++++.+.|+. .+|+ .+++||.||+|+-..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~--~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDF--GGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEE--CTTSCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEE--CCCceeEEEeCEEEECCCcc
Confidence 45666666654 6799999999999998765477763 4552 478999999999775
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.14 E-value=0.12 Score=52.43 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=45.4
Q ss_pred eeehhhhH---hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 155 VGSFRKGL---TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 155 ~~~~~gG~---~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
++...+|. ..+.++|.+.+ |.+|+++++|++|+.++++ |.|. +.+|..+++||.||+|+...
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~--t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLT--FGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEE--EC-CCCCEEESEEEECCGGG
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEE--eCCCcEEEECCEEEECCCcc
Confidence 34444443 45677777654 6799999999999998887 8876 45552158999999999876
No 45
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.00 E-value=0.15 Score=47.17 Aligned_cols=51 Identities=10% Similarity=0.305 Sum_probs=40.1
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.++|.+.+ |.+|+++++|++|+.++++ |.|+ +.+| +++||.||+|+...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~--~~~g--~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIE--TADG--EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEE--ESSC--EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEE--ECCC--eEEcCEEEEcCCcc
Confidence 4555565544 6799999999999998776 8775 4567 58999999999875
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.70 E-value=0.15 Score=48.24 Aligned_cols=56 Identities=18% Similarity=0.344 Sum_probs=44.1
Q ss_pred hhhHhHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 159 RKGLTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 159 ~gG~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
......+.+.|.+.+ |.+|+++++|++|+.++++ +.|+ +.+| +++||.||+|+-..
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~--~~~g--~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVT--TSAG--TVDAASLVVASGGK 186 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEE--ETTE--EEEESEEEECCCCS
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEE--ECCc--EEEeeEEEECCCCc
Confidence 444556777777765 6799999999999988776 8886 4566 78999999998654
No 47
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=92.16 E-value=0.18 Score=47.12 Aligned_cols=51 Identities=22% Similarity=0.273 Sum_probs=39.0
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+..+|.+. .|.+|+++++|++|+.++++ |+|. +.+| +++||.||+|+-..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v~v~--t~~g--~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADG-VSVT--TDRG--TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEE--ESSC--EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-EEEE--ECCC--EEEcCEEEEcCCcC
Confidence 455555554 36799999999999988776 7775 4556 78999999999764
No 48
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.01 E-value=0.26 Score=45.74 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=40.0
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
..+.++|.+.+ |.+|+++++|++|+.++++ |. |+ +.+| +++||.||+|+-..
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-v~gv~--~~~g--~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNE-IKGVK--TNKG--IIKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSB-EEEEE--ETTE--EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCE-EEEEE--ECCc--EEECCEEEECcchh
Confidence 34555565544 6799999999999998776 76 65 4566 78999999999775
No 49
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.90 E-value=0.23 Score=46.15 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=41.3
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 220 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~ 220 (416)
..+.+.|.+.+ |.+|+++++|++|+.++++ +.|+ +.+| +++||.||+|+....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~v~--~~~g--~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-VKIE--TANG--SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-EEEE--ETTE--EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-EEEE--eCCC--EEEeCEEEEecCccH
Confidence 35666666654 6799999999999998776 8776 4555 689999999998753
No 50
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.84 E-value=0.25 Score=46.16 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=44.4
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh-HHHHhc
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS-YVASSL 224 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~-~~~~~l 224 (416)
.|-+.|.+.++++|+++++|++++..+++.|+|++ .+|+ +++||.||-|--. ..+++.
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~--~dG~-~~~adlvVgADG~~S~vR~~ 171 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFF--ADGS-HENVDVLVGADGSNSKVRKQ 171 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEE--TTSC-EEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEE--CCCC-EEEeeEEEECCCCCcchHHH
Confidence 46667777788899999999999987665588874 6785 8999999998655 334443
No 51
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=91.75 E-value=0.26 Score=47.93 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=39.6
Q ss_pred hHhHHHHHHHHHh---ccceecCceeeeEEEc-CCCceEEEEeCCCCceEEecC-EEEEcCCh
Q 014922 161 GLTMLPEAISKRL---GSKVKLSWKLSGVKKL-DSGEYSLTYETPEGLVSLRSR-SVVMTVPS 218 (416)
Q Consensus 161 G~~~l~~~L~~~l---g~~I~l~~~V~~I~~~-~~~~v~v~~~~~~g~~~~~ad-~VI~a~p~ 218 (416)
|...+.+.|.+.+ |.+|+++++|++|..+ +++.+.|.+...++..++.|| .||+|+-.
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 3336777776654 6799999999999998 454223554433333468996 99999854
No 52
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=91.65 E-value=0.35 Score=46.86 Aligned_cols=63 Identities=16% Similarity=0.106 Sum_probs=44.4
Q ss_pred HhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH-HHHhcc
Q 014922 162 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 162 ~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~-~~~~ll 225 (416)
+..+....++..|.+|+++++|++|+.++++ |+|++.+.+|.++++||.||.|--.. .+++.+
T Consensus 109 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 109 TESVLEEWALGRGAELLRGHTVRALTDEGDH-VVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EEEEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 4443333333457799999999999998887 88887544444478999999987663 455554
No 53
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=91.43 E-value=0.21 Score=46.33 Aligned_cols=52 Identities=17% Similarity=0.220 Sum_probs=40.6
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
..+.+.|.+.+ |.+|+++++|++|+.++++ |.|+ +.+| +++||.||+|+...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~-~~v~--~~~g--~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEA-LFIK--TPSG--DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSS-EEEE--ETTE--EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCE-EEEE--cCCc--eEEcCEEEECCChh
Confidence 34666666654 5789999999999988776 7765 4566 78999999999874
No 54
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.24 E-value=0.35 Score=46.17 Aligned_cols=55 Identities=18% Similarity=0.252 Sum_probs=40.9
Q ss_pred HhHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 162 LTMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 162 ~~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
...+.+.|.+.+ |.+|+++++|++|..++++.+.|+ +.+|. +++||.||+|+-..
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~--~~~G~-~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVI--LQTGE-VLETNHVVIAVGGK 190 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEE--ETTCC-EEECSCEEECCCCS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEE--ECCCC-EEECCEEEECCCCC
Confidence 456777777655 579999999999998766435565 35674 69999999998543
No 55
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=91.09 E-value=0.35 Score=46.95 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=44.0
Q ss_pred HhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH-HHHhcc
Q 014922 162 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 162 ~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~-~~~~ll 225 (416)
+..+....++..|.+|+++++|++|+.++++ |+|++.+.+|..+++||.||.|--.. .+++.+
T Consensus 108 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 108 TETHLEQWATGLGADIRRGHEVLSLTDDGAG-VTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EEEEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 3333333333457799999999999998886 88876544444478999999987663 455554
No 56
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.01 E-value=0.3 Score=45.63 Aligned_cols=52 Identities=13% Similarity=0.216 Sum_probs=39.5
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.+.|.+.+ |.+|+++++|++|+.++++.+.|+ +.+| ++.||.||+|+...
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~--~~~g--~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVK--TTRG--TIHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEE--ETTC--CEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEE--eCCc--eEECCEEEECCchh
Confidence 5666666654 679999999999998866534565 4566 68999999999764
No 57
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.65 E-value=0.38 Score=43.80 Aligned_cols=54 Identities=7% Similarity=0.115 Sum_probs=41.7
Q ss_pred hHhHHHHHHHHHhccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH
Q 014922 161 GLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 161 G~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
-+......+++..+.+++++++|++|+.++++ |. |+ +.+| +++||+||+|+-..
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~--~~~g--~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-LRVVA--RDGR--QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTE-EEEEE--TTSC--EEEEEEEEECCCSG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-EEEEE--eCCC--EEEeCEEEECCCCC
Confidence 34444555555667789999999999998776 88 76 5666 78999999999864
No 58
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.49 E-value=0.5 Score=38.44 Aligned_cols=49 Identities=16% Similarity=0.357 Sum_probs=37.0
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+.+ +.+++++ +|++|+.++++ +.|+ +.+| +++||.||+|+-.
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~--~~~g--~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVE--TEEG--VEKAERLLLCTHK 108 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEE--CSSC--EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEE--ECCC--EEEECEEEECCCC
Confidence 3444444443 6789999 99999988776 8776 4566 7899999999865
No 59
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=90.37 E-value=0.46 Score=44.61 Aligned_cols=53 Identities=13% Similarity=0.288 Sum_probs=39.4
Q ss_pred HhHHHHHHHHHh---ccceecCceeeeEEEc----CCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 162 LTMLPEAISKRL---GSKVKLSWKLSGVKKL----DSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 162 ~~~l~~~L~~~l---g~~I~l~~~V~~I~~~----~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
...+.+.|.+.+ |.+|+++++|++|..+ +++ +.|+ +.+| +++||+||+|+-..
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~--~~~g--~i~ad~VVlAtG~~ 167 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQ--VNST--QWQCKNLIVATGGL 167 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEE--ETTE--EEEESEEEECCCCS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEE--ECCC--EEECCEEEECCCCc
Confidence 345666666554 6799999999999987 555 7776 3455 68999999998543
No 60
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=90.19 E-value=0.5 Score=46.32 Aligned_cols=55 Identities=20% Similarity=0.347 Sum_probs=41.3
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYV 220 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~ 220 (416)
..+.+.|.+.+ |.+|+++++|++|..++++.+.|++ .+|+ +++||.||+|+-...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l--~~G~-~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL--SNGE-EIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEE--TTSC-EEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEE--CCCC-EEECCEEEECCCCCh
Confidence 45666666654 6799999999999998776234653 5674 799999999986643
No 61
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.10 E-value=0.67 Score=44.50 Aligned_cols=46 Identities=17% Similarity=0.285 Sum_probs=36.1
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++ +.|++.+.+|.+++++|.||+++..
T Consensus 233 ~~Gv~v~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 233 KQGLKILLGARVTGTEVKNKQ-VTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp HTTEEEEETCEEEEEEECSSC-EEEEEESSSEEEEEEESEEEECSCE
T ss_pred hCCCEEEECCEEEEEEEcCCE-EEEEEEeCCCcEEEECCEEEEeeCC
Confidence 336799999999999988776 7777654444347899999999875
No 62
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=90.05 E-value=0.38 Score=47.48 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=41.0
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh-HHHHhcc
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS-YVASSLL 225 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~-~~~~~ll 225 (416)
..|.+|+++++|++|+.++++ |+|++.+.+|+++++||.||.|.-. ..+++.+
T Consensus 160 ~~gv~i~~~~~v~~l~~~~~~-v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 160 EAGAEIPRGHEVTRLRQDAEA-VEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHTEECCBSCEEEECCBCSSC-EEEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred hCCCEEEeCCEEEEEEEcCCe-EEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 347799999999999998887 8887654567348999999999865 3445554
No 63
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=89.85 E-value=0.57 Score=43.73 Aligned_cols=59 Identities=10% Similarity=0.087 Sum_probs=45.2
Q ss_pred HhHHHHHHHHHh-ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH-HHHhc
Q 014922 162 LTMLPEAISKRL-GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY-VASSL 224 (416)
Q Consensus 162 ~~~l~~~L~~~l-g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~-~~~~l 224 (416)
...+.+.|.+.+ +.+|+++++|++|+.++++ |+|++ .+|. +++||.||.|.-.. .+++.
T Consensus 98 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~--~~g~-~~~ad~vV~AdG~~S~vr~~ 158 (397)
T 2vou_A 98 YDSIYGGLYELFGPERYHTSKCLVGLSQDSET-VQMRF--SDGT-KAEANWVIGADGGASVVRKR 158 (397)
T ss_dssp HHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-EEEEE--TTSC-EEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-EEEEE--CCCC-EEECCEEEECCCcchhHHHH
Confidence 346677777776 5699999999999998887 88875 5674 79999999998663 34443
No 64
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=89.47 E-value=0.69 Score=44.78 Aligned_cols=50 Identities=18% Similarity=0.254 Sum_probs=37.5
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
......+..|.+|+++++|++|+.++++ +.|+ ..+|. +++||.||+|+..
T Consensus 228 ~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v~v~--~~~g~-~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 228 VLEESFAERGVRLFKNARAASVTRTGAG-VLVT--MTDGR-TVEGSHALMTIGS 277 (499)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECSSS-EEEE--ETTSC-EEEESEEEECCCE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeCCE-EEEE--ECCCc-EEEcCEEEECCCC
Confidence 3333334457799999999999987766 7776 35664 7999999999865
No 65
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=89.43 E-value=0.72 Score=43.36 Aligned_cols=51 Identities=8% Similarity=0.128 Sum_probs=37.8
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCce-EEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEY-SLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v-~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.......+..|.+|++++.|++|+.++++ + .|++ .+|+ +++||.||+++..
T Consensus 198 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-v~~v~l--~dG~-~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 198 EFYQAEHRAHGVDLRTGAAMDCIEGDGTK-VTGVRM--QDGS-VIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHTTCEEEETCCEEEEEESSSB-EEEEEE--SSSC-EEECSEEEECSCC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEecCCc-EEEEEe--CCCC-EEEcCEEEECCCC
Confidence 33344444557899999999999987665 4 4653 5774 8999999999865
No 66
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=89.38 E-value=0.59 Score=43.89 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=39.4
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCChH-HHHhcc
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~~-~~~~ll 225 (416)
..|.+|+++++|++|+.++++ +.+++.+.+|+ .+++||.||.|.-.. .+.+.+
T Consensus 118 ~~gv~i~~~~~v~~i~~~~~~-~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~ 172 (421)
T 3nix_A 118 RQGVDVEYEVGVTDIKFFGTD-SVTTIEDINGNKREIEARFIIDASGYGRVIPRMF 172 (421)
T ss_dssp HHTCEEECSEEEEEEEEETTE-EEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHT
T ss_pred hCCCEEEcCCEEEEEEEeCCE-EEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhc
Confidence 347899999999999998776 66666566774 258999999998654 344443
No 67
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.98 E-value=0.61 Score=43.51 Aligned_cols=58 Identities=16% Similarity=0.177 Sum_probs=43.4
Q ss_pred HHHHHHHHHh----ccceecCceeeeEEEcCCCce--EEEEeCCCCceEEecCEEEEcCCh-HHHHhcc
Q 014922 164 MLPEAISKRL----GSKVKLSWKLSGVKKLDSGEY--SLTYETPEGLVSLRSRSVVMTVPS-YVASSLL 225 (416)
Q Consensus 164 ~l~~~L~~~l----g~~I~l~~~V~~I~~~~~~~v--~v~~~~~~g~~~~~ad~VI~a~p~-~~~~~ll 225 (416)
.+.+.|.+.+ +.+|+++++|++|+.++++ | +|++ .+|+ +++||.||.|.-. ..+++.+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~--~~g~-~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRL--NDGR-VLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEE--TTSC-EEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEE--CCCC-EEECCEEEECCCCChHHHHHh
Confidence 4555666654 4689999999999998887 7 7774 5675 7999999999866 3345554
No 68
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.97 E-value=0.81 Score=44.07 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=35.4
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++ +.|++ .+|. +++||.||+++..
T Consensus 244 ~~Gv~i~~~~~V~~i~~~~~~-v~v~~--~~g~-~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 244 AKGISIIYEATVSQVQSTENC-YNVVL--TNGQ-TICADRVMLATGR 286 (484)
T ss_dssp HHTCEEESSCCEEEEEECSSS-EEEEE--TTSC-EEEESEEEECCCE
T ss_pred HCCCEEEeCCEEEEEEeeCCE-EEEEE--CCCc-EEEcCEEEEeeCC
Confidence 346799999999999988776 77764 5674 7999999999875
No 69
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.92 E-value=0.6 Score=42.89 Aligned_cols=50 Identities=6% Similarity=0.156 Sum_probs=38.6
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
....+++..+.+|+++++|++|+.++++ ++|+. .+| ++.||+||+|+-..
T Consensus 93 ~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~--~~g--~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 93 YLQVVANHYELNIFENTVVTNISADDAY-YTIAT--TTE--TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEE--SSC--CEEEEEEEECCCST
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEECCCe-EEEEe--CCC--EEEeCEEEECCCCC
Confidence 3444555667789999999999988766 88863 455 58999999998764
No 70
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=88.58 E-value=0.79 Score=42.92 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=36.1
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
....+..|.+|+++++|++|+.++++...|+ ..+|+ +++||.||+++..
T Consensus 191 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~--~~dG~-~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 191 HDRHSGAGIRMHYGVRATEIAAEGDRVTGVV--LSDGN-TLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEETTEEEEEE--ETTSC-EEECSEEEECCCE
T ss_pred HHHHHhCCcEEEECCEEEEEEecCCcEEEEE--eCCCC-EEEcCEEEECcCC
Confidence 3333445779999999999998766522355 35775 8999999999865
No 71
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=88.46 E-value=0.67 Score=43.25 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=41.0
Q ss_pred HHHHHHHHHhc-cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~lg-~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.|.+.|.+.+. .+|+++++|++|+.++++ |+|++ .+|. +++||.||.|.-..
T Consensus 129 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~--~~g~-~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 129 DLRAILLNSLENDTVIWDRKLVMLEPGKKK-WTLTF--ENKP-SETADLVILANGGM 181 (398)
T ss_dssp HHHHHHHHTSCTTSEEESCCEEEEEECSSS-EEEEE--TTSC-CEEESEEEECSCTT
T ss_pred HHHHHHHhhcCCCEEEECCEEEEEEECCCE-EEEEE--CCCc-EEecCEEEECCCcc
Confidence 45666666663 589999999999998876 88875 4674 78999999998763
No 72
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=88.29 E-value=0.75 Score=43.03 Aligned_cols=51 Identities=14% Similarity=0.225 Sum_probs=40.4
Q ss_pred HHHHHHHHHhc-cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg-~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.|.+.|.+.+. .+|+++++|++|+.++++ |+|++ .+|+ +++||.||.|.-.
T Consensus 128 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~--~~g~-~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 128 ELQREMLDYWGRDSVQFGKRVTRCEEDADG-VTVWF--TDGS-SASGDLLIAADGS 179 (407)
T ss_dssp HHHHHHHHHHCGGGEEESCCEEEEEEETTE-EEEEE--TTSC-EEEESEEEECCCT
T ss_pred HHHHHHHHhCCcCEEEECCEEEEEEecCCc-EEEEE--cCCC-EEeeCEEEECCCc
Confidence 45566666653 689999999999998886 88874 5675 8999999999765
No 73
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=88.14 E-value=0.85 Score=43.72 Aligned_cols=46 Identities=9% Similarity=0.022 Sum_probs=35.8
Q ss_pred HHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 169 ISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 169 L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..+..|.+|+++++|++|+.++++ ++|++ .+|+ +++||.||+|+..
T Consensus 211 ~l~~~GV~i~~~~~v~~i~~~~~~-v~v~~--~~g~-~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 211 DLEKNDVVVHTGEKVVRLEGENGK-VARVI--TDKR-TLDADLVILAAGV 256 (472)
T ss_dssp HHHHTTCEEECSCCEEEEEESSSB-EEEEE--ESSC-EEECSEEEECSCE
T ss_pred HHHhcCCEEEeCCEEEEEEccCCe-EEEEE--eCCC-EEEcCEEEECCCC
Confidence 333446799999999999987665 77764 4664 8999999999865
No 74
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.08 E-value=0.78 Score=43.62 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=38.3
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc--eEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL--VSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~--~~~~ad~VI~a~p~ 218 (416)
...+..++.++..|+++++|++|+..+++ |+|++.. .+|. .++.||+||+|+-.
T Consensus 119 ~~l~~~~~~~~~~i~~~t~V~~v~~~~~~-~~V~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 119 EYQRIYAQPLLPFIKLATDVLDIEKKDGS-WVVTYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp HHHHHHHGGGGGGEECSEEEEEEEEETTE-EEEEEEESSTTCCEEEEEESEEEECCCS
T ss_pred HHHHHHHHHhhCeEEeCCEEEEEEeCCCe-EEEEEeecCCCCeeEEEEeCEEEECCCC
Confidence 33344444445689999999999988776 8887642 1242 26899999999876
No 75
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=87.82 E-value=1.1 Score=44.11 Aligned_cols=55 Identities=7% Similarity=0.117 Sum_probs=38.2
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcC-CCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~-~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
.+.+.|.+.+ |.+|+++++|++|..++ ++.+.|.+.+.+|. .++.||.||+|+-.
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 4666666654 67999999999998876 54223554433553 36899999999854
No 76
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=87.81 E-value=0.81 Score=42.44 Aligned_cols=51 Identities=16% Similarity=0.108 Sum_probs=36.9
Q ss_pred hccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH-HHHhc
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY-VASSL 224 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~-~~~~l 224 (416)
.|.+|+++++|++|+.++++ ++ |++.+.++..+++||.||.|.-.. .+.+.
T Consensus 115 ~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~ 167 (397)
T 3cgv_A 115 AGADVWVKSPALGVIKENGK-VAGAKIRHNNEIVDVRAKMVIAADGFESEFGRW 167 (397)
T ss_dssp HTCEEESSCCEEEEEEETTE-EEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred CCCEEEECCEEEEEEEeCCE-EEEEEEEECCeEEEEEcCEEEECCCcchHhHHh
Confidence 47799999999999998775 65 765332222489999999998653 34443
No 77
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=87.25 E-value=1 Score=42.95 Aligned_cols=44 Identities=14% Similarity=0.208 Sum_probs=34.4
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
+..|.+|+++++|++|+..+++ +.|+ +++| +++||.||+|+...
T Consensus 200 ~~~GV~i~~~~~v~~i~~~~~~-v~v~--~~~g--~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEETANG-IVLE--TSEQ--EISCDSGIFALNLH 243 (452)
T ss_dssp HTTTEEEEETCCEEEEEECSSC-EEEE--ESSC--EEEESEEEECSCCB
T ss_pred HHcCCEEEeCCEEEEEEccCCe-EEEE--ECCC--EEEeCEEEECcCCC
Confidence 3346799999999999987776 7665 3455 78999999998653
No 78
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=87.15 E-value=0.96 Score=42.00 Aligned_cols=50 Identities=24% Similarity=0.299 Sum_probs=37.4
Q ss_pred HHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 165 LPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+.+.+. .|.+|+++++|++|+.++++ +.|++ .+|. +++||.||+|+..
T Consensus 189 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~--~~g~-~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 189 AAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-LEAHL--SDGE-VIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHHHHTTTCEEEESCCEEEEEEETTE-EEEEE--TTSC-EEEESEEEECSCE
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEecCCE-EEEEE--CCCC-EEECCEEEECcCC
Confidence 34444444 36799999999999987665 77764 4674 7999999999864
No 79
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=87.14 E-value=0.67 Score=44.00 Aligned_cols=52 Identities=12% Similarity=0.231 Sum_probs=38.4
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEE---------------cCCCceEEEEeCCCCceEE--ecCEEEEcCChH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKK---------------LDSGEYSLTYETPEGLVSL--RSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~---------------~~~~~v~v~~~~~~g~~~~--~ad~VI~a~p~~ 219 (416)
.+.++|.+.+ |.+|+++++|++|+. ++++.+.|. +.+| ++ .||.||+|+...
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~--t~~g--~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAV--LSDG--TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEE--ETTS--CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEE--eCCC--EEeecCCEEEECCCcC
Confidence 5666666654 679999999999998 444422454 4567 57 999999999875
No 80
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=87.05 E-value=1.2 Score=43.89 Aligned_cols=56 Identities=7% Similarity=0.018 Sum_probs=39.2
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcC-CCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~-~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
..+.+.|.+.+ +.+|+++++|++|..++ ++.+.|.+.+.+|. .++.||.||+|+-.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 34666666654 57999999999999876 54222554433553 36899999999855
No 81
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=87.00 E-value=0.8 Score=47.44 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=40.2
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCce-EEEEeCCCCceEEecCEEEEcCChHH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEY-SLTYETPEGLVSLRSRSVVMTVPSYV 220 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v-~v~~~~~~g~~~~~ad~VI~a~p~~~ 220 (416)
.+..+|++.+ |++|+++++|++|+.++++ + .|. +.+| +++||.||+|+-...
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~-v~~V~--t~~G--~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSGGR-VTGVQ--TADG--VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTE-EEEEE--ETTE--EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeCCE-EEEEE--ECCc--EEECCEEEECCccch
Confidence 5666666654 6799999999999987765 4 454 4566 789999999998754
No 82
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=86.79 E-value=1.2 Score=41.76 Aligned_cols=48 Identities=19% Similarity=0.232 Sum_probs=35.5
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
....+..|.+|++++.|++|+.++.. ..|++ .+|+ +++||.||+++..
T Consensus 192 ~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~--~dg~-~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 192 RGLLTELGVQVELGTGVVGFSGEGQL-EQVMA--SDGR-SFVADSALICVGA 239 (410)
T ss_dssp HHHHHHHTCEEECSCCEEEEECSSSC-CEEEE--TTSC-EEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCEEEEEeccCcE-EEEEE--CCCC-EEEcCEEEEeeCC
Confidence 33334446799999999999876532 46663 5674 8999999999876
No 83
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=86.60 E-value=1.2 Score=43.83 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=39.2
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcC-CCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~-~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
..+.+.|.+.+ |.+|+++++|++|..++ ++.+.|++.+.+|. .++.||.||+|+-.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 34666666654 67999999999999887 54223554434563 36889999999855
No 84
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=86.48 E-value=1.2 Score=39.57 Aligned_cols=55 Identities=15% Similarity=0.041 Sum_probs=39.3
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+..|.+|+++++|.+|+.++++...|++.+.+|+ .++.+|.||+++..
T Consensus 187 ~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 187 STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 45556666667799999999999887654223554444664 47889999999765
No 85
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=86.41 E-value=1.7 Score=41.56 Aligned_cols=47 Identities=21% Similarity=0.186 Sum_probs=34.4
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+.++++ +.|++.+.+|+ .+++||.||+++..
T Consensus 227 ~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTNNGDS-VSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HHTCCEEECSCEEEEEEECSSS-EEEEEECC---EEEEEESEEEECSCE
T ss_pred hcCCcEEEeCCEEEEEEEcCCe-EEEEEEcCCCceEEEECCEEEECCCc
Confidence 4456799999999999987766 77765432452 37899999999854
No 86
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=86.24 E-value=1.5 Score=42.32 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=34.3
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++.+.|++ .+|+ +++||.||+++..
T Consensus 243 ~~GV~i~~~~~v~~i~~~~~~~~~v~~--~~G~-~i~~D~vv~a~G~ 286 (490)
T 1fec_A 243 ANGINVRTHENPAKVTKNADGTRHVVF--ESGA-EADYDVVMLAIGR 286 (490)
T ss_dssp HTTEEEEETCCEEEEEECTTSCEEEEE--TTSC-EEEESEEEECSCE
T ss_pred hCCCEEEeCCEEEEEEEcCCCEEEEEE--CCCc-EEEcCEEEEccCC
Confidence 346799999999999987654366664 5674 7999999999865
No 87
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=85.95 E-value=1.3 Score=42.13 Aligned_cols=42 Identities=17% Similarity=0.250 Sum_probs=33.9
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.|.+|+++++|++|+.++++ +.|++ .+|. +++||.||+|+..
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~-v~v~~--~~g~-~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKG-ARVEL--EGGE-VLEADRVLVAVGR 262 (455)
T ss_dssp HTCEEECSCCEEEEEEETTE-EEEEE--TTSC-EEEESEEEECSCE
T ss_pred CCCEEEECCEEEEEEEeCCE-EEEEE--CCCe-EEEcCEEEECcCC
Confidence 46799999999999987765 77764 4564 7999999999865
No 88
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=85.71 E-value=1.7 Score=42.01 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=34.2
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++.+.|++ .+|+ +++||.||+++..
T Consensus 247 ~~GV~i~~~~~v~~i~~~~~~~~~v~~--~~G~-~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 247 ANGIEIMTNENPAKVSLNTDGSKHVTF--ESGK-TLDVDVVMMAIGR 290 (495)
T ss_dssp HTTCEEEESCCEEEEEECTTSCEEEEE--TTSC-EEEESEEEECSCE
T ss_pred hCCCEEEeCCEEEEEEEcCCceEEEEE--CCCc-EEEcCEEEECCCC
Confidence 346799999999999987654366664 4675 7999999999864
No 89
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=85.10 E-value=1.9 Score=41.06 Aligned_cols=44 Identities=16% Similarity=0.189 Sum_probs=34.0
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++.+.|++ .+|+ ++++|.||+++..
T Consensus 220 ~~Gv~i~~~~~v~~i~~~~~~~~~v~~--~~g~-~i~~D~vv~a~G~ 263 (450)
T 1ges_A 220 AEGPQLHTNAIPKAVVKNTDGSLTLEL--EDGR-SETVDCLIWAIGR 263 (450)
T ss_dssp HHSCEEECSCCEEEEEECTTSCEEEEE--TTSC-EEEESEEEECSCE
T ss_pred HCCCEEEeCCEEEEEEEeCCcEEEEEE--CCCc-EEEcCEEEECCCC
Confidence 346799999999999986554366664 5674 7899999999854
No 90
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=85.05 E-value=1.3 Score=42.66 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=34.3
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|++++.|++|+.++++ +.|++ .+|+ ++.||.||+++..
T Consensus 237 ~~~GV~v~~~~~V~~i~~~~~~-~~v~l--~dG~-~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 237 RREGVKVMPNAIVQSVGVSSGK-LLIKL--KDGR-KVETDHIVAAVGL 280 (493)
T ss_dssp HTTTCEEECSCCEEEEEEETTE-EEEEE--TTSC-EEEESEEEECCCE
T ss_pred HhcCCEEEeCCEEEEEEecCCe-EEEEE--CCCC-EEECCEEEECCCC
Confidence 3446799999999999876554 66653 5674 8999999999865
No 91
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=84.98 E-value=1.2 Score=43.45 Aligned_cols=54 Identities=22% Similarity=0.269 Sum_probs=40.7
Q ss_pred HhHHHHHHHHHhcc--ceecCceeeeEEEcCC-CceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 162 LTMLPEAISKRLGS--KVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 162 ~~~l~~~L~~~lg~--~I~l~~~V~~I~~~~~-~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+....+..++..+. +|+++++|++++.+++ +.|+|+ +.+|+ +++||.||+|+-.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~--~~~G~-~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVT--TDHGE-VYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEE--ETTSC-EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEE--EcCCC-EEEeCEEEECCcc
Confidence 44555566666654 8999999999998765 237776 45774 7899999999875
No 92
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=84.98 E-value=2.5 Score=40.27 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=35.1
Q ss_pred HHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 170 SKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 170 ~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
.+..|.+|++++.|++|+.++++ +.|++. .+|+ +++++|.||+++..
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~-~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGGSQ-VTVTVT-KDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECSSC-EEEEEE-SSSCEEEEEESEEEECSCE
T ss_pred HHHcCCEEEeCcEEEEEEEcCCe-EEEEEE-cCCceEEEEcCEEEECCCC
Confidence 33446799999999999987665 777653 2342 47899999999854
No 93
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=84.86 E-value=1.5 Score=43.19 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=40.8
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeC-CCC-ceEEecCEEEEcCChHH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYET-PEG-LVSLRSRSVVMTVPSYV 220 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g-~~~~~ad~VI~a~p~~~ 220 (416)
..+..+|++.+ |++|+++++|++|..++++.+.|++.. .+| ..+++||.||.|+-+..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 34666666554 789999999999999877523465432 123 24789999999997753
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=84.79 E-value=0.45 Score=43.15 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=29.0
Q ss_pred CCCCEEEeeccCC--------CCchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVA--------GVALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~--------g~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
.+|+||.|||... |.-+.+++.||++||+.|++.|.+
T Consensus 282 ~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~laa 326 (326)
T 3fpz_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA 326 (326)
T ss_dssp TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 4789999998531 333556899999999999998863
No 95
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=84.66 E-value=1.7 Score=42.08 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=35.7
Q ss_pred hccceecCceeeeEEEcCCCceE-EEEeCCCCc-eEEecCEEEEcCChH
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~-~~~~ad~VI~a~p~~ 219 (416)
.|.+|+++++|++|..++++ +. |++.+.+|+ .+++||.||.|.-..
T Consensus 124 ~Gv~i~~~~~V~~v~~~~~~-v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 124 KGVDVRERHEVIDVLFEGER-AVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp TTCEEESSCEEEEEEEETTE-EEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred CCCEEEcCCEEEEEEEECCE-EEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 46799999999999998775 43 555555674 478999999998764
No 96
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.79 E-value=3.3 Score=36.91 Aligned_cols=54 Identities=11% Similarity=0.112 Sum_probs=36.6
Q ss_pred HHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCC-C-C-ceEEecCEEEEcCCh
Q 014922 165 LPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETP-E-G-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~-~-g-~~~~~ad~VI~a~p~ 218 (416)
+.+.+.+. .+.+|+++++|++|+.++++...|++... + | ..++.||.||+++..
T Consensus 186 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 186 LIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 44555554 35689999999999987655223555431 1 3 247899999999875
No 97
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=83.70 E-value=2 Score=41.09 Aligned_cols=52 Identities=12% Similarity=0.145 Sum_probs=36.0
Q ss_pred HHHHHHhccc--eecCceeeeEEEcCC-CceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 167 EAISKRLGSK--VKLSWKLSGVKKLDS-GEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~--I~l~~~V~~I~~~~~-~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+..++..+.+ |++++.|++|+..++ +.|+|++.. .+|. .++.||+||+|+-.
T Consensus 108 ~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 108 KGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp HHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred HHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 3344444544 999999999998765 138887642 1242 47899999999884
No 98
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=83.61 E-value=0.7 Score=43.30 Aligned_cols=51 Identities=8% Similarity=0.130 Sum_probs=34.6
Q ss_pred HHHHHHHHHh---ccceecCceee---------eEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLS---------GVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~---------~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.++|.+.+ |.+|+++++|+ +|..++++ |.|. +.+| +++||.||+|+-..
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~-v~v~--~~~g--~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTH-QIVV--HETR--QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------C--BCCE--EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCe-EEEE--ECCc--EEECCEEEECCCcc
Confidence 4666666654 57899999999 99887665 7654 4566 78999999999775
No 99
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.42 E-value=2.2 Score=38.26 Aligned_cols=56 Identities=9% Similarity=-0.000 Sum_probs=38.7
Q ss_pred hHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
..+.+.+.+..|.+|+++++|++|+.++++...|++.. .+|+ .++.||.||+++..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 34555565544679999999999998876522365532 2232 47899999999865
No 100
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=83.34 E-value=2.2 Score=41.50 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=33.2
Q ss_pred HhccceecCceeeeEEEcCCCc---eEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGE---YSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~---v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++. +.|+ +.+|+.+++||.||+|+..
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~--~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAM--TPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEE--ETTEEEEEECSCEEECCCC
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEE--ECCCcEEEEcCEEEECcCC
Confidence 3467999999999999865542 4454 3566327899999999853
No 101
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=83.24 E-value=3.1 Score=39.72 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=34.7
Q ss_pred HHHhccceecCceeeeEEEcCCCceEEEEe---CCCCceEEecCEEEEcCCh
Q 014922 170 SKRLGSKVKLSWKLSGVKKLDSGEYSLTYE---TPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 170 ~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~---~~~g~~~~~ad~VI~a~p~ 218 (416)
.+..|.+|+++++|++|+.++++.+.|++. +.++ .++++|.||+++..
T Consensus 230 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~-~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 230 LQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKA-EVITCDVLLVCIGR 280 (474)
T ss_dssp HHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCC-EEEEESEEEECSCE
T ss_pred HHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCc-eEEEcCEEEECcCC
Confidence 334467999999999999876532556542 2345 47899999999864
No 102
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=83.21 E-value=1.9 Score=42.54 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=38.9
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCChHH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 220 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 220 (416)
.+..+|++. .|++|+.+++|++|..++++.+.|++.. .+|. .++.||.||+|+-+..
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 355555544 3679999999999998876523455431 1232 3689999999998753
No 103
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=83.21 E-value=0.94 Score=43.19 Aligned_cols=59 Identities=5% Similarity=0.071 Sum_probs=38.9
Q ss_pred hhHhHHHHHHHHHhccceecCceeeeEEEcC--CCce--EEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 160 KGLTMLPEAISKRLGSKVKLSWKLSGVKKLD--SGEY--SLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 160 gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~--~~~v--~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
.-+....+..++.++.+|+++++|++|+..+ ++.| +|+....+|+ .++.||+||+|+-.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 3344555555666677999999999999862 2224 4543222232 27899999999864
No 104
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=83.06 E-value=1.9 Score=42.30 Aligned_cols=54 Identities=11% Similarity=0.228 Sum_probs=40.3
Q ss_pred HhHHHHHHHHHhcc--ceecCceeeeEEEcCC-CceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 162 LTMLPEAISKRLGS--KVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 162 ~~~l~~~L~~~lg~--~I~l~~~V~~I~~~~~-~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+....+.+++..+. +|+++++|++++.+++ +.|+|+ +.+|. +++||.||+|+-.
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~--~~~G~-~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVR--TDRGD-EVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEE--ETTCC-EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEE--ECCCC-EEEeCEEEECcCC
Confidence 44455556666654 8999999999998765 237776 45774 7999999999874
No 105
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=82.99 E-value=2.2 Score=38.90 Aligned_cols=52 Identities=25% Similarity=0.309 Sum_probs=38.4
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.+.|.+.+ +.++++++.|++|+..+++.++|+. .+|. ++.||+||+|+-.
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~--~~g~-~~~~~~li~AtG~ 129 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRT--NTGN-VYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEE--TTSC-EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEE--CCCc-EEEeeEEEEccCC
Confidence 4455555444 5689999999999987653478863 5664 7999999999875
No 106
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=82.92 E-value=2.8 Score=39.51 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=33.5
Q ss_pred HHhccceecCceeeeEEE--cCCCce-EEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKK--LDSGEY-SLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~--~~~~~v-~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+. ++++ + .|++ .+|. ++.||.||+++..
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~~~~-v~~v~~--~~G~-~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTDQQK-VTAVLC--EDGT-RLPADLVIAGIGL 248 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTTTCC-EEEEEE--TTSC-EEECSEEEECCCE
T ss_pred HhCCeEEEeCCEEEEEEeccCCCc-EEEEEe--CCCC-EEEcCEEEECCCC
Confidence 344679999999999997 4454 5 4653 5674 7999999999864
No 107
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=82.90 E-value=1.8 Score=38.97 Aligned_cols=51 Identities=12% Similarity=0.235 Sum_probs=38.2
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+.+ +.++++++.|++|+.+++. ++|+ +.+|. ++.||+||+|+-.
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~--~~~g~-~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREGDL-FKVT--TSQGN-AYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEETTE-EEEE--ETTSC-EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECCCE-EEEE--ECCCC-EEEeCEEEECCCC
Confidence 4555555544 4588999999999987764 8776 35664 7899999999875
No 108
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=82.86 E-value=1.2 Score=39.66 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=31.5
Q ss_pred CCCCEEEeeccCCCCc--hhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVAGVA--LGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~--~~~ai~sg~~aA~~il~~l~~~ 413 (416)
..++||-|||...+.. ..-|+.+|..||..+.+.|++|
T Consensus 275 s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~H 314 (314)
T 4a5l_A 275 SVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH 314 (314)
T ss_dssp SSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5799999999876543 3458899999999999999876
No 109
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=82.76 E-value=2.5 Score=39.51 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=39.6
Q ss_pred HHHHHHHhc-cceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh-HHHHhcc
Q 014922 166 PEAISKRLG-SKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS-YVASSLL 225 (416)
Q Consensus 166 ~~~L~~~lg-~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~-~~~~~ll 225 (416)
.+.+.+..+ .+|+++++|++|+. +++ |+|++.. .+|+ .+++||.||.|.-. ..+++.+
T Consensus 114 ~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 114 LAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 334433345 38999999999998 666 8887642 1352 47899999999866 3445544
No 110
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=82.48 E-value=2.8 Score=40.03 Aligned_cols=46 Identities=22% Similarity=0.288 Sum_probs=33.9
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCC-CCc-eEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~-~g~-~~~~ad~VI~a~p~ 218 (416)
..|.+|++++.|++|+.++++ +.|++..+ .|+ ++++||.||+++..
T Consensus 222 ~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 222 KEGIRVRTKTKAVGYEKKKDG-LHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HTTCEEECSEEEEEEEEETTE-EEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred hcCCEEEcCCEEEEEEEeCCE-EEEEEeecCCCceeEEEcCEEEECCCc
Confidence 346799999999999987665 77765312 142 36899999999853
No 111
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.38 E-value=2.2 Score=40.53 Aligned_cols=44 Identities=9% Similarity=0.064 Sum_probs=34.1
Q ss_pred ccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 174 GSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+|++++.|++|+.++++ +.|++.. .+|+ .++++|.||+|+-.
T Consensus 330 ~v~i~~~~~v~~v~~~~~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQG-IELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CSEEETTEEEEEEEEETTE-EEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CeEEEeCCEEEEEEecCCE-EEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 4589999999999988776 8887642 2453 35899999999865
No 112
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=82.34 E-value=2.3 Score=39.39 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=36.3
Q ss_pred ccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCChH-HHHhcc
Q 014922 174 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~~-~~~~ll 225 (416)
+.+|+++++|++|+.++++.+.|++. .+|. .+++||.||.|.-.. .+++.+
T Consensus 117 g~~i~~~~~v~~i~~~~~~~~~v~~~-~~g~~~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDLQGERPYVTFE-RDGERLRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp TCEEESSCEEEEEECTTSSSCEEEEE-ETTEEEEEECSEEEECCCTTCSTGGGS
T ss_pred CCeEEeceeEEEEEEecCCceEEEEe-cCCcEEEEEeCEEEECCCCCcHHHHhc
Confidence 67999999999999864323777752 3563 268999999998663 344444
No 113
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=82.34 E-value=2.7 Score=39.87 Aligned_cols=60 Identities=13% Similarity=-0.082 Sum_probs=40.6
Q ss_pred HHHHHHHH---hccceecCceeeeEEEcCCCceE-EEEeCC-CCc-eEEecCEEEEcCChHH-HHhcc
Q 014922 165 LPEAISKR---LGSKVKLSWKLSGVKKLDSGEYS-LTYETP-EGL-VSLRSRSVVMTVPSYV-ASSLL 225 (416)
Q Consensus 165 l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~-v~~~~~-~g~-~~~~ad~VI~a~p~~~-~~~ll 225 (416)
+.+.|.+. .|.+|+++++|++|..++++ +. |++.+. +|+ .+++||.||.|.-... +.+.+
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l 168 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFEDGY-VKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKL 168 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEETTE-EEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGS
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEECCE-EEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhc
Confidence 44444443 46799999999999987765 54 655433 553 3789999999986643 33443
No 114
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=82.26 E-value=1.6 Score=39.17 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=39.0
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..+.+.+.+.+ +.++++++.|++|+..+++.|.|+. .+| ++.+|+||+|+-.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~--~~g--~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVT--NEE--THYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEE--SSE--EEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEE--CCC--EEEeCEEEECCCC
Confidence 34555555544 5689999999999998763488863 566 4899999999876
No 115
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.24 E-value=2.4 Score=40.25 Aligned_cols=46 Identities=24% Similarity=0.343 Sum_probs=34.4
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCC-CCceEEecCEEEEcCChH
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~-~g~~~~~ad~VI~a~p~~ 219 (416)
..|.+|++++.|++|+.++++ +.|++.+. ++ .++++|.||+++...
T Consensus 223 ~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~-~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 223 KKGVEVVTNALAKGAEEREDG-VTVTYEANGET-KTIDADYVLVTVGRR 269 (455)
T ss_dssp HTTCEEEESEEEEEEEEETTE-EEEEEEETTEE-EEEEESEEEECSCEE
T ss_pred HCCCEEEeCCEEEEEEEeCCe-EEEEEEeCCce-eEEEcCEEEECcCCC
Confidence 346799999999999987665 77765322 33 478999999998653
No 116
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.99 E-value=2.6 Score=40.23 Aligned_cols=47 Identities=28% Similarity=0.368 Sum_probs=34.7
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCC-CC-ceEEecCEEEEcCChH
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EG-LVSLRSRSVVMTVPSY 219 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~-~g-~~~~~ad~VI~a~p~~ 219 (416)
..|.+|+++++|++|+.++++ +.|++.+. +| ..++.+|.||+++...
T Consensus 230 ~~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 230 KQGMKFKLKTKVVGVDTSGDG-VKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HSSCCEECSEEEEEEECSSSS-EEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HcCCEEEeCCEEEEEEEcCCe-EEEEEEecCCCcceEEECCEEEECCCCC
Confidence 346799999999999987665 77765321 33 1478999999998653
No 117
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=81.87 E-value=2.2 Score=40.70 Aligned_cols=55 Identities=24% Similarity=0.359 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhccceecCceeeeEEEcC-CCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRLGSKVKLSWKLSGVKKLD-SGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~lg~~I~l~~~V~~I~~~~-~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
..+.+.+.+.+..+|+++++|++|+.++ ++ +.|++...+|+ .++++|.||+++..
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCC
Confidence 3466667776667899999999999876 55 77775321453 47899999999865
No 118
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=81.83 E-value=2.6 Score=40.17 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=34.1
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+.++++.+.|++ +.+| + ++||.||+++..
T Consensus 222 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~~g-~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSADADGRRVATT-MKHG-E-IVADQVMLALGR 266 (463)
T ss_dssp HHTTCEEECSCCEEEEEECTTSCEEEEE-SSSC-E-EEESEEEECSCE
T ss_pred HHCCCEEECCCEEEEEEEcCCCEEEEEE-cCCC-e-EEeCEEEEeeCc
Confidence 3346799999999999987665345541 4677 3 899999999865
No 119
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.67 E-value=3 Score=40.20 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=33.3
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceE-EecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVS-LRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~-~~ad~VI~a~p~ 218 (416)
.|.+|++++.|++|+.++++.+.|++ .+|+ + +++|.||+++..
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~--~~g~-~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHL--SDGR-IYEHFDHVIYCVGR 273 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEE--TTSC-EEEEESEEEECCCB
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEE--CCCc-EEEECCEEEECCCC
Confidence 36799999999999986543366664 4674 5 899999999875
No 120
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=81.16 E-value=2.9 Score=41.38 Aligned_cols=47 Identities=23% Similarity=0.134 Sum_probs=35.3
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCChH
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~~ 219 (416)
..|.+|+.+++|++|+.++++.+.|++.. +|. .+++||.||.|.-..
T Consensus 140 ~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 140 SRGITVHEETPVTDVDLSDPDRVVLTVRR-GGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp HTTCEEETTCCEEEEECCSTTCEEEEEEE-TTEEEEEEESEEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCCEEEEEEec-CCceEEEEcCEEEECCCCc
Confidence 34679999999999998644447777642 442 478999999998664
No 121
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=80.88 E-value=2.9 Score=40.11 Aligned_cols=46 Identities=13% Similarity=0.063 Sum_probs=33.4
Q ss_pred HHhccceecCceeeeEEEcCCC-ceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSG-EYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~-~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+.++++ .+.|++ .+|++++++|.||+++..
T Consensus 237 ~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~--~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 237 VKEGINVHKLSKIVKVEKNVETDKLKIHM--NDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHTCEEECSCCEEEEEECC-CCCEEEEE--TTSCEEEEESEEEECSCE
T ss_pred HhCCeEEEeCCEEEEEEEcCCCcEEEEEE--CCCcEEEEcCEEEECCCC
Confidence 3346799999999999876543 256654 466237899999999864
No 122
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=80.78 E-value=2.7 Score=40.13 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=33.9
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++ +.|++ .+|+.++++|.||+++..
T Consensus 219 ~~gv~i~~~~~v~~i~~~~~~-~~v~~--~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 219 AQGIETHLEFAVAALERDAQG-TTLVA--QDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HTTCEEESSCCEEEEEEETTE-EEEEE--TTCCEEEEESEEEECSCE
T ss_pred HCCCEEEeCCEEEEEEEeCCe-EEEEE--eCCcEEEEcCEEEECCCC
Confidence 346799999999999987665 77764 466216899999999854
No 123
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=80.74 E-value=2.9 Score=39.69 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=33.9
Q ss_pred HHHHhccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH
Q 014922 169 ISKRLGSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 169 L~~~lg~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
..+..|.+|+++++|++|+.++++ +. |. . +|. +++||.||+++...
T Consensus 200 ~l~~~Gv~i~~~~~v~~i~~~~~~-v~~v~--~-~g~-~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 200 DYEAHGVNLVLGSKVAAFEEVDDE-IITKT--L-DGK-EIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHTTCEEEESSCEEEEEEETTE-EEEEE--T-TSC-EEEESEEEECCCEE
T ss_pred HHHHCCCEEEcCCeeEEEEcCCCe-EEEEE--e-CCC-EEECCEEEECcCCC
Confidence 333446799999999999875554 54 43 3 564 79999999998653
No 124
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=80.39 E-value=3.6 Score=40.21 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=33.0
Q ss_pred Hh-ccceecCceeeeEEEcCCCc-eEEEEeCCCCceEEecCEEEEcCChH
Q 014922 172 RL-GSKVKLSWKLSGVKKLDSGE-YSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 172 ~l-g~~I~l~~~V~~I~~~~~~~-v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.. |++|+++ +|++|+.++++. +.|+ +.+|. +++||.||.|.-..
T Consensus 206 ~~~Gv~i~~~-~V~~i~~~~~g~~~~v~--~~~G~-~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 206 EKLGVRHVED-RVEHVQRDANGNIESVR--TATGR-VFDADLFVDCSGFR 251 (550)
T ss_dssp HHSCCEEEEC-CEEEEEECTTSCEEEEE--ETTSC-EEECSEEEECCGGG
T ss_pred hcCCcEEEEC-eEeEEEEcCCCCEEEEE--ECCCC-EEECCEEEECCCCc
Confidence 45 7799999 999999865542 3444 45674 79999999998764
No 125
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=80.32 E-value=4 Score=39.25 Aligned_cols=53 Identities=8% Similarity=0.049 Sum_probs=38.2
Q ss_pred HHHHHHHHhc--cceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRLG--SKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg--~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.+.+.+. .+|+++++|++|+.++++ +.|++...+|+ .+++||.||+++..
T Consensus 217 ~~~~l~~~l~~~V~i~~~~~v~~i~~~~~~-v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 217 MKRYAEKTFNEEFYFDAKARVISTIEKEDA-VEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHTTSEEETTCEEEEEEECSSS-EEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHhhCcEEEECCEEEEEEEcCCE-EEEEEEeCCCceEEEECCEEEEeeCC
Confidence 3444444432 589999999999988776 88876433552 47899999999865
No 126
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=80.20 E-value=3.4 Score=40.40 Aligned_cols=60 Identities=15% Similarity=0.220 Sum_probs=42.0
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCChH-HHHhcc
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~-~~~~ll 225 (416)
+-+.|.+.+...|+++++|++|+.++++ |+|++.+ .+|+ .+++||.||.|.-.. .+++.+
T Consensus 140 l~~~L~~~a~~~v~~~~~v~~~~~~~~~-v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 140 LAPLLAEAVGERLRTRSRLDSFEQRDDH-VRATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHGGGEECSEEEEEEEECSSC-EEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcccCcEEEEEEEeCCE-EEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 4445555553229999999999998887 8887643 2352 478999999998663 355554
No 127
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=80.06 E-value=3.4 Score=39.86 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=40.3
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCChHH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSYV 220 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~~ 220 (416)
.+..+|++.+ |.+|+++++|++|..+++. +.|++.+ .+|+ .+++||.||.|+-+..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~-~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRENGL-WIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-EEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCE-EEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 4666666554 6799999999999987653 6676432 2452 3689999999997753
No 128
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=79.86 E-value=3.7 Score=39.40 Aligned_cols=46 Identities=26% Similarity=0.424 Sum_probs=34.8
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCC-C-ceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPE-G-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~-g-~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.++++ +.|++...+ | .+++++|.||+++..
T Consensus 251 ~~gV~v~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 251 KQGIDFKLGAKVTGAVKSGDG-AKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HTTCEEECSEEEEEEEEETTE-EEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred hCCCEEEECCeEEEEEEeCCE-EEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 336799999999999988776 777764311 3 247899999999864
No 129
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=79.64 E-value=2.5 Score=35.99 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=28.0
Q ss_pred CCCCEEEeeccCCCCchh-HHHHHHHHHHHHHHHHh
Q 014922 376 GYQGLFLGGNYVAGVALG-RCVESAYEVASEVSNFL 410 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~~-~ai~sg~~aA~~il~~l 410 (416)
.+|+||.+|+.. +.++. .++.+|+.+|+.|++.+
T Consensus 197 ~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 197 RLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccceeeeecc-cCccHHHHHHHHHHHHHHHHhhc
Confidence 368999999877 55544 48999999999999876
No 130
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=79.04 E-value=2.5 Score=39.29 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.+++++++|++|+.++. +|++ .+|. ++.||+||+|+-.
T Consensus 73 ~~~~i~~~~~~~V~~id~~~~---~v~~--~~g~-~~~yd~lvlAtG~ 114 (385)
T 3klj_A 73 EKNNIKVITSEFATSIDPNNK---LVTL--KSGE-KIKYEKLIIASGS 114 (385)
T ss_dssp HHTTCEEECSCCEEEEETTTT---EEEE--TTSC-EEECSEEEECCCE
T ss_pred HHCCCEEEeCCEEEEEECCCC---EEEE--CCCC-EEECCEEEEecCC
Confidence 345668999999999997654 3432 4674 8999999999875
No 131
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=78.76 E-value=3.2 Score=40.49 Aligned_cols=54 Identities=9% Similarity=0.215 Sum_probs=39.4
Q ss_pred HhHHHHHHHHHhc--cceecCceeeeEEEcCC-CceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 162 LTMLPEAISKRLG--SKVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 162 ~~~l~~~L~~~lg--~~I~l~~~V~~I~~~~~-~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+....+.+++.++ .+|+++++|++++.+++ +.|+|+. .+|. +++||.||+|+-.
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~--~~G~-~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT--NHGD-RIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE--TTCC-EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE--CCCC-EEEeCEEEECcCC
Confidence 3344455555543 57999999999998654 3488864 5674 7899999999875
No 132
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=78.51 E-value=3.6 Score=39.35 Aligned_cols=46 Identities=24% Similarity=0.266 Sum_probs=33.1
Q ss_pred HHhccceecCceeeeEEE--cCCCceEEEEe---CCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKK--LDSGEYSLTYE---TPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~--~~~~~v~v~~~---~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+. ++++ +.|++. +.+| .++++|.||+++..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~-~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNV-VEIVVEDTKTNKQ-ENLEAEVLLVAVGR 285 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTE-EEEEEEETTTTEE-EEEEESEEEECSCE
T ss_pred HHCCCEEEeCCEEEEEEEecCCCe-EEEEEEEcCCCCc-eEEECCEEEECCCC
Confidence 334679999999999997 4443 666653 1133 47899999999864
No 133
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=78.44 E-value=2.6 Score=41.23 Aligned_cols=54 Identities=4% Similarity=0.127 Sum_probs=40.4
Q ss_pred HhHHHHHHHHHhcc--ceecCceeeeEEEcCC-CceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 162 LTMLPEAISKRLGS--KVKLSWKLSGVKKLDS-GEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 162 ~~~l~~~L~~~lg~--~I~l~~~V~~I~~~~~-~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+....+.+++..+. .|+++++|++++.+++ +.|+|+ +.+|. +++||.||+|+-.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~--~~~G~-~~~ad~lV~AtG~ 145 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVT--LDNEE-VVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEE--ETTTE-EEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEE--ECCCC-EEEeCEEEECcCC
Confidence 44555666666653 7999999999998654 347886 45774 8999999999874
No 134
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=78.39 E-value=3.2 Score=39.58 Aligned_cols=49 Identities=24% Similarity=0.346 Sum_probs=35.4
Q ss_pred HHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 165 LPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+.+.+. .|.+|+++++|++|+.+++. +.|.+ +++ +++||.||+++..
T Consensus 218 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~--~~~--~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 218 IGEAVTAAFRAEGIEVLEHTQASQVAHMDGE-FVLTT--THG--ELRADKLLVATGR 269 (467)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEEETTE-EEEEE--TTE--EEEESEEEECSCE
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEE--CCc--EEEcCEEEECCCC
Confidence 44444443 46799999999999886554 66653 333 7899999999865
No 135
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=78.21 E-value=4.8 Score=38.82 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=36.1
Q ss_pred HHHHHHHH---hccceecCceeeeEEEcCCCc-eEEEEeCCCCceEEecCEEEEcCChH
Q 014922 165 LPEAISKR---LGSKVKLSWKLSGVKKLDSGE-YSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 165 l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~-v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
+.+.|.+. .|.+|+.+ +|++|+.++++. +.|+ +.+|. +++||.||.|.-..
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~--~~~g~-~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVH--TKQHG-EISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE--ESSSC-EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEE--ECCCC-EEEcCEEEECCCcc
Confidence 44444443 46799999 999999865542 3454 45674 79999999998764
No 136
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=77.31 E-value=6.2 Score=37.75 Aligned_cols=46 Identities=20% Similarity=0.157 Sum_probs=33.5
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCC-C-ceEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPE-G-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~-g-~~~~~ad~VI~a~p~ 218 (416)
.|.+|++++.|++|+..+++.+.|++...+ | ..++++|.||+++..
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 357999999999999865543667654322 2 236899999999865
No 137
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=76.85 E-value=4.4 Score=39.63 Aligned_cols=49 Identities=22% Similarity=0.274 Sum_probs=35.4
Q ss_pred HHHHHHHhccceecCceeeeEEEc-------------------CCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 166 PEAISKRLGSKVKLSWKLSGVKKL-------------------DSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 166 ~~~L~~~lg~~I~l~~~V~~I~~~-------------------~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.....+..|.+|++++.|++|+.+ +++ +++++ .+|+ +++||.||+++..
T Consensus 198 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~--~~g~-~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTL--SNGE-LLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEE--TTSC-EEEESEEEECSCE
T ss_pred HHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEE--cCCC-EEEcCEEEECcCC
Confidence 333344456799999999999873 443 66664 4664 8999999999854
No 138
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=76.39 E-value=4 Score=35.94 Aligned_cols=54 Identities=9% Similarity=0.036 Sum_probs=35.2
Q ss_pred HHHHHHHHHh----ccceecCceeeeEEEcCCCce-EEEEeC-------CCC----ceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRL----GSKVKLSWKLSGVKKLDSGEY-SLTYET-------PEG----LVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~l----g~~I~l~~~V~~I~~~~~~~v-~v~~~~-------~~g----~~~~~ad~VI~a~p~ 218 (416)
.+...|.+.+ +.+|++++.|++|..++++ + .|.+.. .+| ..+++||.||+|+-.
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~-v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNR-VGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTE-EEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCe-EEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 3444454443 5689999999999987664 3 343321 121 247899999999864
No 139
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=76.13 E-value=3.1 Score=39.89 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=33.1
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeC-CC-CceEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYET-PE-GLVSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~-g~~~~~ad~VI~a~p~ 218 (416)
.|.+|++++.|++|+.++++ +.|++.. .+ |+ +++||.||+++..
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~-~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDG-VYVTFEGANAPKE-PQRYDAVLVAAGR 284 (482)
T ss_dssp GEEEEECSCEEEEEEEETTE-EEEEEESSSCCSS-CEEESCEEECCCE
T ss_pred cCCEEEECCEEEEEEEcCCe-EEEEEeccCCCce-EEEcCEEEECcCC
Confidence 35699999999999987665 6776532 11 53 6889999999864
No 140
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=75.93 E-value=4.2 Score=36.04 Aligned_cols=53 Identities=15% Similarity=0.058 Sum_probs=36.0
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCce-EEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEY-SLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v-~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.|.+..+.+|+++++|++|+.++++ + .|++.. .+|+ .++.+|.||+++..
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGDASG-VSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEETTE-EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECCCCc-EeEEEEEecCCCceEEEecCEEEEEecC
Confidence 4555554446689999999999877554 3 455432 2453 36899999998754
No 141
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=75.64 E-value=7.2 Score=37.21 Aligned_cols=48 Identities=21% Similarity=0.157 Sum_probs=33.3
Q ss_pred HHhccceecCceeeeEEEcCCC-ceEEEEeCCC-Cc---eEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSG-EYSLTYETPE-GL---VSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~-~v~v~~~~~~-g~---~~~~ad~VI~a~p~ 218 (416)
+..|.+|++++.|++|+..+++ .+.|++...+ |+ .++++|.||+++..
T Consensus 239 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 3346799999999999987665 2455542111 21 47899999999865
No 142
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=75.50 E-value=5.8 Score=35.07 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=35.7
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCce-EEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEY-SLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v-~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.|.+..+.+|+++++|++|..++++ + .|++.. .+|+ .++.+|.||+++..
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDGSK-VVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESSSS-EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCCCc-EEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 4444443346699999999999977654 4 455532 2343 46899999998753
No 143
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=75.38 E-value=3.5 Score=39.75 Aligned_cols=56 Identities=13% Similarity=0.162 Sum_probs=38.1
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcC--CCceEEEEeCC-CCc-eEEecCEEEEcCChH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLD--SGEYSLTYETP-EGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~--~~~v~v~~~~~-~g~-~~~~ad~VI~a~p~~ 219 (416)
.+.+.|.+. .+.+|+++++|++|+.++ ++.+.|++... +|. .+++||.||.|+-..
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 344444444 367999999999998752 22377775433 552 368999999998764
No 144
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=75.14 E-value=4.2 Score=35.99 Aligned_cols=38 Identities=11% Similarity=0.178 Sum_probs=30.7
Q ss_pred CCCCEEEeeccCCCC--chhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVAGV--ALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~--~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
..++||.+||..... ....|+..|+.||..|...+...
T Consensus 268 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 268 NVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp SSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHh
Confidence 468999999987543 35669999999999999988654
No 145
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=74.99 E-value=6.1 Score=38.31 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=32.0
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.|.+|+.+ .|++|+.++++ +.+.+.+.+|. +++||.||.|.-..
T Consensus 189 ~Gv~i~~~-~v~~i~~~~~g-~~~~v~~~~g~-~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIINNQHG-DIEKLITKQNG-EISGQLFIDCTGAK 232 (526)
T ss_dssp SCCEEEEC-CEEEEEECTTS-CEEEEEESSSC-EEECSEEEECSGGG
T ss_pred CCCEEEEe-EEEEEEecCCC-cEEEEEECCCC-EEEcCEEEECCCcc
Confidence 56789999 59999987665 43222245664 69999999998764
No 146
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=74.94 E-value=7.8 Score=37.11 Aligned_cols=46 Identities=20% Similarity=0.223 Sum_probs=33.0
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCC-CCc-eEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~-~g~-~~~~ad~VI~a~p~ 218 (416)
.|.+|++++.|++|+..+++.+.|++... +|+ .++++|.||+++..
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 35689999999999885544366765432 253 24789999999865
No 147
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=74.65 E-value=6.1 Score=38.07 Aligned_cols=57 Identities=14% Similarity=0.143 Sum_probs=40.9
Q ss_pred HhHHHHHHHHHhccceecCceeeeEEEcCCC-------ceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 162 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSG-------EYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 162 ~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~-------~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+....+..+++++..|++++.|++|+..+.. .|+|+... ..|+ +++.|++||+++..
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 5556666677777789999999999875431 37787542 2222 46889999999973
No 148
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=74.49 E-value=5.2 Score=38.63 Aligned_cols=50 Identities=12% Similarity=0.091 Sum_probs=36.1
Q ss_pred cceecCceeeeEEEcCC--CceEEEEeCCCC----ceEEecCEEEEcCChHHHHhc
Q 014922 175 SKVKLSWKLSGVKKLDS--GEYSLTYETPEG----LVSLRSRSVVMTVPSYVASSL 224 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~~~--~~v~v~~~~~~g----~~~~~ad~VI~a~p~~~~~~l 224 (416)
.+|++++.|++|..+++ +.+.|.+...+| ..++.|+.||+++..-...+|
T Consensus 242 ~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 242 LTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp EEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred cEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 59999999999998763 234566543355 357889999999977654444
No 149
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=74.28 E-value=6.5 Score=38.77 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=39.1
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEc-CCCceEEEEe-CCCCc-eEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKL-DSGEYSLTYE-TPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~-~~~~v~v~~~-~~~g~-~~~~ad~VI~a~p~~ 219 (416)
..+.+.|.+.+ +.+|+++++|++|..+ +++.+.|.+. +.+|+ ..+.|+.||+|+-..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 35666666654 6799999999999986 4542334432 24553 368999999998763
No 150
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=74.22 E-value=6.2 Score=38.34 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=32.6
Q ss_pred hccceecCceeeeEEEcCCCc-eEEEEeCCCCceEEecCEEEEcCChH
Q 014922 173 LGSKVKLSWKLSGVKKLDSGE-YSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~-v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.|.+++.+ +|++|+.++++. +.|+ +.+|. +++||.||.|.-..
T Consensus 178 ~gv~~~~~-~v~~i~~~~~g~~~~v~--~~~g~-~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRLNNRGYISNLL--TKEGR-TLEADLFIDCSGMR 221 (538)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEE--ETTSC-EECCSEEEECCGGG
T ss_pred CCCEEEEe-eEeEEEEcCCCcEEEEE--ECCCc-EEEeCEEEECCCCc
Confidence 46789999 899999876552 3454 45674 79999999998764
No 151
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=73.96 E-value=5.2 Score=39.77 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=40.4
Q ss_pred hHHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~ 219 (416)
..+...|.+.+ +.+|+.+++|++|..+++++..|...+ .+|+ ..+.|+.||+|+-..
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 36777787765 569999999999988766422344322 3553 368999999998664
No 152
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=73.72 E-value=1.3 Score=41.35 Aligned_cols=41 Identities=12% Similarity=0.061 Sum_probs=33.1
Q ss_pred ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 174 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+|++++.|..++.+.++ ..|. +.+|+ +++||.||++.|.
T Consensus 216 gi~v~~~~~v~~v~~~~~~-~~v~--~~~g~-~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEA-MTVE--TSFGE-TFKAAVINLIPPQ 256 (401)
T ss_dssp SEEEECTTTTCEEEEETTT-TEEE--ETTSC-EEECSEEEECCCE
T ss_pred CcEEEeCceEEEEEecccc-eEEE--cCCCc-EEEeeEEEEecCc
Confidence 4589999999999988775 6665 46775 8999999998764
No 153
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=73.53 E-value=5.1 Score=35.51 Aligned_cols=51 Identities=10% Similarity=0.109 Sum_probs=35.9
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.+.+.+. .+.++++ +.|++|+.++++ +.|+. .+|. ++.||+||+|+-..
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~--~~g~-~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE-FVVKT--KRKG-EFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C-EEEEE--SSSC-EEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE-EEEEE--CCCC-EEEcCEEEECcCCC
Confidence 344444443 3568888 999999988776 88863 5654 88999999998654
No 154
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=73.23 E-value=4.8 Score=39.63 Aligned_cols=42 Identities=7% Similarity=0.149 Sum_probs=31.5
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+.++++ +.+ .+|+ +++||.||+|+..
T Consensus 239 ~~~GV~i~~~~~v~~i~~~~~~-v~~----~~g~-~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEENGAV-VRL----KSGS-VIQTDMLILAIGV 280 (588)
T ss_dssp HHTTCEEECSCCEEEEEGGGTE-EEE----TTSC-EEECSEEEECSCE
T ss_pred HHcCCEEEECCeEEEEecCCCE-EEE----CCCC-EEEcCEEEEccCC
Confidence 3446799999999999876443 433 3664 8999999999854
No 155
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=72.93 E-value=6 Score=38.14 Aligned_cols=50 Identities=8% Similarity=0.185 Sum_probs=35.6
Q ss_pred cceecCceeeeEEEcCC--CceEEEEeCCCC----ceEEecCEEEEcCChHHHHhc
Q 014922 175 SKVKLSWKLSGVKKLDS--GEYSLTYETPEG----LVSLRSRSVVMTVPSYVASSL 224 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~~~--~~v~v~~~~~~g----~~~~~ad~VI~a~p~~~~~~l 224 (416)
.+|++++.|++|..+++ +.+.|.+...+| ..++.|+.||+|+-.-...+|
T Consensus 237 ~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 237 VTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp EEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred cEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 59999999999998753 234465543355 247889999999977544443
No 156
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=72.83 E-value=6 Score=39.45 Aligned_cols=54 Identities=17% Similarity=0.086 Sum_probs=38.0
Q ss_pred Hhcc--ceecCceeeeEEEcCC---CceEEEEeC----CCCc-eEEecCEEEEcCChH-HHHhcc
Q 014922 172 RLGS--KVKLSWKLSGVKKLDS---GEYSLTYET----PEGL-VSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 172 ~lg~--~I~l~~~V~~I~~~~~---~~v~v~~~~----~~g~-~~~~ad~VI~a~p~~-~~~~ll 225 (416)
..|. +|+++++|++|+.+++ ..|+|++.+ .+|. .+++||.||.|.-.. .+++.+
T Consensus 153 ~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 217 (639)
T 2dkh_A 153 NSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAI 217 (639)
T ss_dssp HSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred hCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHh
Confidence 3455 8999999999998763 137887653 2442 478999999998663 455554
No 157
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=72.75 E-value=5.5 Score=35.57 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=30.4
Q ss_pred CCCCEEEeeccCCC--CchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g--~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||.... .....|+.+|..||..|...+..
T Consensus 298 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 298 SVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp SSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHHhc
Confidence 46899999998753 34567999999999999998864
No 158
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=72.69 E-value=6.7 Score=36.57 Aligned_cols=44 Identities=11% Similarity=0.205 Sum_probs=31.9
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
....+..|.+|+++++|++|+ + + .|++ .+|. +++||.||+++..
T Consensus 194 ~~~l~~~GV~i~~~~~v~~i~-~-~---~v~~--~~g~-~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 194 ARYHAAQGVDLRFERSVTGSV-D-G---VVLL--DDGT-RIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHTTCEEEESCCEEEEE-T-T---EEEE--TTSC-EEECSEEEECSCE
T ss_pred HHHHHHcCcEEEeCCEEEEEE-C-C---EEEE--CCCC-EEEcCEEEECcCC
Confidence 333344467999999999998 3 3 3432 4674 8999999999865
No 159
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=72.46 E-value=5.7 Score=38.17 Aligned_cols=60 Identities=7% Similarity=-0.058 Sum_probs=40.5
Q ss_pred eeehhhhHhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 155 VGSFRKGLTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 155 ~~~~~gG~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
+..+-||...+- ..++..|.+|++++.|++|+.+++. ..|. +.+|. +++||.||+++...
T Consensus 253 vvViGgG~~gle-~~l~~~GV~v~~~~~v~~i~~~~~v-~~v~--~~~g~-~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 253 VAVTGSKADEVI-QELERWGIDYVHIPNVKRVEGNEKV-ERVI--DMNNH-EYKVDALIFADGRR 312 (493)
T ss_dssp EEEESTTHHHHH-HHHHHHTCEEEECSSEEEEECSSSC-CEEE--ETTCC-EEECSEEEECCCEE
T ss_pred EEEECCCHHHHH-HHHHhCCcEEEeCCeeEEEecCCce-EEEE--eCCCe-EEEeCEEEECCCcC
Confidence 333434554444 3445567899999999999865432 4454 35664 89999999998653
No 160
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=72.24 E-value=8 Score=38.74 Aligned_cols=56 Identities=11% Similarity=0.176 Sum_probs=39.1
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcCCCceEEEE-eCCCCc-eEEecCEEEEcCChH
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTY-ETPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~-~~~~g~-~~~~ad~VI~a~p~~ 219 (416)
.+..+|.+.+ +.+|+.+++|++|..+++++..|.. .+.+|+ ..+.||.||+|+-..
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 5667776654 6799999999999886654223433 234563 358999999998663
No 161
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=72.23 E-value=6.6 Score=35.01 Aligned_cols=54 Identities=7% Similarity=0.030 Sum_probs=36.0
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+..+.+|+++++|++|..+ ++...|++.. .+|+ .++.||.||+++..
T Consensus 192 ~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 192 VAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 34455544446689999999999875 3312455432 2453 47899999999864
No 162
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=72.16 E-value=5.4 Score=35.35 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=37.0
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+..+.+++++++|++|+.+++. ..|++.. .+|+ .++.+|.||+++..
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGDKVV-KQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESSSE-EEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEeccCce-eEEEEEECCCCceEEEEcCEEEEEECC
Confidence 44555555456799999999999987432 4465532 2353 36899999999765
No 163
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=72.07 E-value=3.9 Score=39.10 Aligned_cols=53 Identities=11% Similarity=0.033 Sum_probs=35.4
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.+.|.+. .+.+|+.+++| +|..++++...|.+.+.+| .+.||.||+|+-..
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g--~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL--VEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE--ECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC--eEEeeeEEECCCCC
Confidence 345555544 36799999999 9988766422344333444 57799999998663
No 164
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=72.03 E-value=7.6 Score=34.67 Aligned_cols=53 Identities=8% Similarity=0.011 Sum_probs=35.5
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCC--Cce-EEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDS--GEY-SLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~--~~v-~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.+.+..+.+|++++.|++|+.+++ + + .|.+.+ .+|+ .++.||.||+++..
T Consensus 200 ~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 200 MQQRALSNPKIDVIWNSSVVEAYGDGERDV-LGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESSSSSS-EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhCCCeeEecCCceEEEeCCCCccc-eeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 333444444668999999999998764 4 3 255432 2342 47899999999865
No 165
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=71.16 E-value=7 Score=35.49 Aligned_cols=45 Identities=7% Similarity=0.136 Sum_probs=32.6
Q ss_pred ccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 174 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+|+++++|++|+.++++...|++...+|+ .++++|.||+++..
T Consensus 216 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 216 TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 5689999999999987654124544323552 47899999999874
No 166
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=71.14 E-value=10 Score=37.25 Aligned_cols=34 Identities=21% Similarity=0.078 Sum_probs=28.6
Q ss_pred CCEEEeeccCC------CCchhHHHHHHHHHHHHHHHHhh
Q 014922 378 QGLFLGGNYVA------GVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 378 ~~l~~aG~~~~------g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
++++++||..+ |.|++.|+.+|..+|+.|...+.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 79999998543 67888899999999999987663
No 167
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=70.85 E-value=3.5 Score=34.99 Aligned_cols=42 Identities=21% Similarity=0.179 Sum_probs=30.8
Q ss_pred ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 174 GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
+.+|+ +++|++|..++++.+.|. +.+|. +++||.||.|+-..
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~--~~~g~-~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVR--TWEGP-PARGEKVVLAVGSF 124 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEE--ETTSC-CEECSEEEECCTTC
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEE--ECCCC-EEECCEEEECCCCC
Confidence 44677 679999998776522454 35674 79999999998773
No 168
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=70.47 E-value=9.4 Score=36.76 Aligned_cols=53 Identities=11% Similarity=0.134 Sum_probs=35.4
Q ss_pred HhHHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc---eEEecCEEEEcCC
Q 014922 162 LTMLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL---VSLRSRSVVMTVP 217 (416)
Q Consensus 162 ~~~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~---~~~~ad~VI~a~p 217 (416)
+...+....+..|.+|++|++|++|+. ++ +.+.....+|. +++.||.||.|+.
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~-~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVEE--KQ-LLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEECS--SE-EEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHhcceeeecCceEEEEeC--Cc-eEEEEEecCcccceeeeccCEEEEccC
Confidence 334444444455789999999999974 33 44443345653 3689999998873
No 169
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=69.99 E-value=6.2 Score=34.89 Aligned_cols=50 Identities=18% Similarity=0.315 Sum_probs=35.6
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+. .+.++++ +.|++|+.++++ ++|+. .+|. +++||.||+|+-.
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~--~~g~-~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSH-FVILA--EDGK-TFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEETTE-EEEEE--TTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCE-EEEEE--cCCC-EEECCEEEECCCC
Confidence 344444443 3567877 799999987775 77763 4564 7999999999874
No 170
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=69.47 E-value=12 Score=33.18 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=35.0
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.+. ..+.+|+++++|++|..++++...|.+.. .+|+ .++.||.||+++..
T Consensus 196 l~~~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 196 YVQEIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHH-HTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHh-cCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 444443 34679999999999998755312344431 2453 36899999998754
No 171
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=69.41 E-value=6.9 Score=35.13 Aligned_cols=53 Identities=9% Similarity=0.068 Sum_probs=35.3
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.+.+..+.+|++++.|++|+.+++. ..|.+.. .+|+ +++.||.||+++..
T Consensus 196 ~~~~~~~~~gV~v~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 196 MLDRARNNDKIRFLTNHTVVAVDGDTTV-TGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEECSSSC-CEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred HHHHHhccCCcEEEeCceeEEEecCCcE-eEEEEEEcCCCceEEeecCEEEEccCC
Confidence 4445555556799999999999876532 3344321 2342 47899999999865
No 172
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=68.13 E-value=4.5 Score=35.94 Aligned_cols=41 Identities=10% Similarity=0.270 Sum_probs=31.2
Q ss_pred hhhcCCCCEEEeeccCCC-C-chhHHHHHHHHHHHHHHHHhhhc
Q 014922 372 LRDNGYQGLFLGGNYVAG-V-ALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 372 l~~~~~~~l~~aG~~~~g-~-~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
+++ ..++||-+||.... . -+..|+..|+.||..|.+.|..-
T Consensus 266 ~~T-s~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~l 308 (312)
T 4gcm_A 266 MTT-SVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHL 308 (312)
T ss_dssp SBC-SSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-CCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344 57899999997642 2 24569999999999998887653
No 173
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=68.12 E-value=7.8 Score=34.59 Aligned_cols=50 Identities=14% Similarity=0.274 Sum_probs=36.2
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.+.|.+. .+.++++++ |++|+..+++ ++|+ + +| .+++||.||+|+-..
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~~v~--~-~~-~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSSKP-FKLF--T-DS-KAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSSSS-EEEE--C-SS-EEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE-EEEE--E-CC-cEEEcCEEEECCCCC
Confidence 344444443 356888887 9999987776 8886 3 55 389999999998763
No 174
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=68.02 E-value=6 Score=31.74 Aligned_cols=39 Identities=15% Similarity=0.050 Sum_probs=30.6
Q ss_pred CCCCEEEeeccCCCC--chhHHHHHHHHHHHHHHHHhhhcc
Q 014922 376 GYQGLFLGGNYVAGV--ALGRCVESAYEVASEVSNFLSQYA 414 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~--~~~~ai~sg~~aA~~il~~l~~~~ 414 (416)
..++||.+||..... ....|+..|..||..|...+....
T Consensus 134 ~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 174 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRGEP 174 (180)
T ss_dssp SSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhhcc
Confidence 468999999976543 345699999999999998876543
No 175
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=67.84 E-value=8.9 Score=37.37 Aligned_cols=49 Identities=12% Similarity=0.115 Sum_probs=37.1
Q ss_pred HHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCC
Q 014922 165 LPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVP 217 (416)
Q Consensus 165 l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p 217 (416)
+.+.+.+.+ |.++++++.|++++..+++ +.|.+ .++. ++.+|.|++|+-
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~-~~v~~--~~~~-~~~~D~vLvAvG 316 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKMDDK-ILVEF--SDKT-SELYDTVLYAIG 316 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEETTE-EEEEE--TTSC-EEEESEEEECSC
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEecCCe-EEEEE--cCCC-eEEEEEEEEccc
Confidence 445555544 5689999999999998886 77764 3453 788999999984
No 176
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=67.77 E-value=9.1 Score=35.06 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=33.6
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH-HHHhcc
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY-VASSLL 225 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~-~~~~ll 225 (416)
.|.+|+++++|++|+. ++ +|++ .+|. +++||.||.|.-.. .+++.+
T Consensus 120 ~gv~i~~~~~v~~i~~--~~--~v~~--~~g~-~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 120 LGVDISVNSEAVAADP--VG--RLTL--QTGE-VLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp TTCEEESSCCEEEEET--TT--EEEE--TTSC-EEECSEEEECCCTTCHHHHHH
T ss_pred cCCEEEeCCEEEEEEe--CC--EEEE--CCCC-EEEcCEEEECCCccHHHHHHh
Confidence 3679999999999987 33 5543 4674 79999999998663 344444
No 177
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=67.53 E-value=3.7 Score=38.91 Aligned_cols=36 Identities=11% Similarity=0.204 Sum_probs=27.5
Q ss_pred CCCCEEEeeccC------CCCchhHHHHHHHHHHHHHHHHhh
Q 014922 376 GYQGLFLGGNYV------AGVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 376 ~~~~l~~aG~~~------~g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
++++||+||+-+ .|.++..|+.+|+.|++.+.....
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 689999999533 233455699999999999877653
No 178
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.89 E-value=6.5 Score=36.93 Aligned_cols=50 Identities=6% Similarity=-0.013 Sum_probs=34.9
Q ss_pred HHHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCC-ceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g-~~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+..|.++++++.|++|+. ++ +.+. +.+| .+++.||.||.+++.
T Consensus 204 ~~l~~~l~~~GV~~~~~~~v~~v~~--~~-~~~~--~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 204 RLVEDLFAERNIDWIANVAVKAIEP--DK-VIYE--DLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECS--SE-EEEE--CTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHhCCeEEEeCceEEEEeC--Cc-eEEE--eeCCCceEeecceEEEeccC
Confidence 4455555556789999999999963 33 5554 3343 257899999998754
No 179
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=66.62 E-value=8.2 Score=37.66 Aligned_cols=51 Identities=10% Similarity=0.232 Sum_probs=36.6
Q ss_pred HHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 166 PEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 166 ~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
.+.+.+..+.+++++++|++|+..++. +.+.. ..+|. .++.||+||+|+-.
T Consensus 64 ~~~~~~~~~i~~~~~~~V~~id~~~~~-v~~~~-~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 64 PESFKARFNVEVRVKHEVVAIDRAAKL-VTVRR-LLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHHHHHHCCEEETTEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCE-EEEEe-cCCCCeEEEECCEEEECCCC
Confidence 345555567789999999999987664 66642 12232 47899999999865
No 180
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=66.25 E-value=7.9 Score=36.51 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=35.7
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+.+..+.++++++.|++|+..... +.+.....+....+.||++|+|+-.
T Consensus 64 ~~~~~~~~i~~~~~~~V~~id~~~~~-~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 64 EKFYDRKQITVKTYHEVIAINDERQT-VSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp HHHHHHHCCEEEETEEEEEEETTTTE-EEEEETTTTEEEEEECSEEEECCCE
T ss_pred HHHHHhcCCEEEeCCeEEEEEccCcE-EEEEeccCCceEEEEcCEEEECCCC
Confidence 45556666789999999999987664 6554321122246889999999875
No 181
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=66.01 E-value=6.2 Score=34.45 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=30.9
Q ss_pred CCCCEEEeeccCCC-CchhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVAG-VALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~g-~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
..++||.+||.... .....|+..|+.||..|...+...
T Consensus 256 ~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 256 TARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp SSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 46899999998763 345669999999999999988654
No 182
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=65.46 E-value=8.7 Score=33.47 Aligned_cols=52 Identities=4% Similarity=0.081 Sum_probs=36.5
Q ss_pred hHHHHHHHHHhcc--ce-ecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRLGS--KV-KLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~lg~--~I-~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..+.+.+.+.+.. .+ .+++.|++|+.++++ +.|+. .+|. ++.||+||+|+-.
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~-~~v~~--~~g~-~~~~d~vviAtG~ 110 (297)
T 3fbs_A 56 GEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE-FIVEI--DGGR-RETAGRLILAMGV 110 (297)
T ss_dssp HHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE-EEEEE--TTSC-EEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe-EEEEE--CCCC-EEEcCEEEECCCC
Confidence 3556666665521 22 236799999998776 88874 5664 7999999999876
No 183
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=65.35 E-value=11 Score=37.31 Aligned_cols=57 Identities=16% Similarity=0.033 Sum_probs=39.9
Q ss_pred hHHHHHHHHHh---c-cceecCceeeeEEEcCCCceEEEEe-CCCCc-eEEecCEEEEcCChH
Q 014922 163 TMLPEAISKRL---G-SKVKLSWKLSGVKKLDSGEYSLTYE-TPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 163 ~~l~~~L~~~l---g-~~I~l~~~V~~I~~~~~~~v~v~~~-~~~g~-~~~~ad~VI~a~p~~ 219 (416)
..+...|.+.+ + .+|+++++|++|..++++.+.|... ..+|. ..+.|+.||+|+-..
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 35777777765 4 6899999999999876642233322 34563 368999999998663
No 184
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=64.64 E-value=7.7 Score=36.03 Aligned_cols=44 Identities=16% Similarity=0.312 Sum_probs=31.4
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..+.+..|.+++++++|++|+. ++ +.+ .+|+ +++||.||++++.
T Consensus 225 ~~~l~~~gV~~~~~~~v~~i~~--~~-v~~----~~g~-~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 225 ASIYNQLGIKLVHNFKIKEIRE--HE-IVD----EKGN-TIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHTCEEECSCCEEEECS--SE-EEE----TTSC-EEECSEEEEECCE
T ss_pred HHHHHHCCCEEEcCCceEEECC--Ce-EEE----CCCC-EEeeeEEEECCCC
Confidence 3333444679999999999974 32 332 4674 8999999999865
No 185
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=64.33 E-value=11 Score=33.56 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=33.5
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeC-CCC-ceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYET-PEG-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g-~~~~~ad~VI~a~p~ 218 (416)
..+.+++++++|++|+.+++. ..|++.. .+| ..++.+|.||+++..
T Consensus 201 ~~gv~~~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIGEDKI-EQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HSSCEEETTEEEEEEECSSSC-CEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred cCCeEEEeCceeeEEecCCce-EEEEEEecCCCceEEEECCEEEEeecc
Confidence 446799999999999987653 5666542 222 247899999999874
No 186
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=63.73 E-value=6.7 Score=38.21 Aligned_cols=55 Identities=7% Similarity=-0.111 Sum_probs=35.6
Q ss_pred HHHHHHHHhccceecCceeeeEEE-cCC------CceEEEEeC-CCCc-eEEecCEEEEcCChH
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKK-LDS------GEYSLTYET-PEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~-~~~------~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~ 219 (416)
|.+++.+..+.+|+++++|++|.. +++ +++.|.+.+ .+|+ .++.|+.||+|+-..
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 344443324579999999999998 434 422354432 3453 368999999998653
No 187
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=63.18 E-value=8.7 Score=38.10 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=36.2
Q ss_pred HHHHHHHHHh----ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 164 MLPEAISKRL----GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~l----g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
.+.+.|.+.+ +.+| +++.|+.|..++++.+.|. +.+|. .+.||.||+|+-..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~--t~dG~-~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVR--TNLGV-EYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEE--ETTSC-EEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEE--ECCCc-EEEeCEEEEccCCC
Confidence 3455555544 4477 6889999998777622465 35674 89999999999764
No 188
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=62.93 E-value=12 Score=35.66 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=30.8
Q ss_pred HhccceecCceeeeEEEcCCCce-EEEEeCCCCceEEecCEEEEcCChH
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEY-SLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v-~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
..|.+|+++++|++|+.+ ++ + .|. ++++ +++||.||+++...
T Consensus 239 ~~Gv~i~~~~~v~~i~~~-~~-v~~v~--~~~~--~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 239 KHHIEILTNENVKAFKGN-ER-VEAVE--TDKG--TYKADLVLVSVGVK 281 (480)
T ss_dssp HTTCEEECSCCEEEEEES-SB-EEEEE--ETTE--EEECSEEEECSCEE
T ss_pred HcCcEEEcCCEEEEEEcC-Cc-EEEEE--ECCC--EEEcCEEEECcCCC
Confidence 346799999999999875 33 4 344 3333 78999999998653
No 189
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=62.26 E-value=12 Score=35.33 Aligned_cols=42 Identities=7% Similarity=-0.057 Sum_probs=31.0
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+.+ ++.+.|.. +|. +++||.||+++..
T Consensus 203 ~~gv~i~~~~~v~~i~~~-~~v~~v~~---~~~-~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 203 ANNITIATGETVERYEGD-GRVQKVVT---DKN-AYDADLVVVAVGV 244 (447)
T ss_dssp TTTEEEEESCCEEEEECS-SBCCEEEE---SSC-EEECSEEEECSCE
T ss_pred hCCCEEEcCCEEEEEEcc-CcEEEEEE---CCC-EEECCEEEECcCC
Confidence 346799999999999876 43234542 343 7899999999865
No 190
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=62.15 E-value=7.4 Score=34.28 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=30.1
Q ss_pred CCCCEEEeeccCC-C-CchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVA-G-VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~-g-~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||... + .....|+..|+.||..|...+..
T Consensus 275 ~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 275 SVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp SSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHh
Confidence 4689999999863 2 34567999999999999998865
No 191
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=61.52 E-value=3.5 Score=36.55 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=29.9
Q ss_pred CCCCEEEeeccCC-CC-chhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVA-GV-ALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~-g~-~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
..++||-+||... +. .+..|+.+|+.||..|.++|...
T Consensus 263 s~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 263 SEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp SSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5789999999763 22 24569999999999999988654
No 192
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=61.28 E-value=10 Score=36.90 Aligned_cols=51 Identities=12% Similarity=0.047 Sum_probs=35.5
Q ss_pred ccceecCceeeeEEEcC-CCceEEEEeCCC-Cc-eEEecC-EEEEcCChHHHHhc
Q 014922 174 GSKVKLSWKLSGVKKLD-SGEYSLTYETPE-GL-VSLRSR-SVVMTVPSYVASSL 224 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~-~~~v~v~~~~~~-g~-~~~~ad-~VI~a~p~~~~~~l 224 (416)
+.+|++++.|++|..++ ++.+.|.+.... |. .++.|+ .||+|+-.-...+|
T Consensus 223 ~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~l 277 (546)
T 2jbv_A 223 NFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKL 277 (546)
T ss_dssp TEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred CcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchh
Confidence 45899999999999976 543446654321 43 468898 99999877444444
No 193
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=61.18 E-value=15 Score=35.40 Aligned_cols=46 Identities=11% Similarity=0.209 Sum_probs=31.3
Q ss_pred hccceecCceeeeEEEcCC---CceEEEEeCCCCc--eEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDS---GEYSLTYETPEGL--VSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~---~~v~v~~~~~~g~--~~~~ad~VI~a~p~ 218 (416)
.|.+|++++.|++|+..++ +.+.|++...+|. .++.+|.||+++..
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 3568999999988876432 2256654434442 25689999999865
No 194
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=60.92 E-value=8.5 Score=34.15 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=30.2
Q ss_pred CCCCEEEeeccCCC--CchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g--~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||.... .....|+..|+.||..|...+..
T Consensus 279 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 279 SVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp SSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhc
Confidence 46899999998754 34556999999999999988854
No 195
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.49 E-value=15 Score=37.00 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=31.2
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEe-CCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYE-TPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~-~~~g~~~~~ad~VI~a~p~ 218 (416)
+..|.+|+++++|++|+.+ + +.+... +.++ +++.||.||+++..
T Consensus 578 ~~~GV~i~~~~~V~~i~~~--~-~~v~~~~~~~~-~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 578 IENGVARVTDHAVVAVGAG--G-VTVRDTYASIE-RELECDAVVMVTAR 622 (690)
T ss_dssp HHTTCEEEESEEEEEEETT--E-EEEEETTTCCE-EEEECSEEEEESCE
T ss_pred HHCCCEEEcCcEEEEEECC--e-EEEEEccCCeE-EEEECCEEEECCCC
Confidence 3446799999999999843 3 455422 2344 47899999999865
No 196
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=60.46 E-value=13 Score=33.31 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=29.1
Q ss_pred CCCCEEEeeccCCC--CchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g--~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||.... .....|+.+|+.||..|...+..
T Consensus 279 ~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 279 SLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp SSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 46899999998753 23456999999999999887754
No 197
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=60.30 E-value=19 Score=31.97 Aligned_cols=54 Identities=11% Similarity=-0.019 Sum_probs=36.0
Q ss_pred HHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeC-CCCc-eEEecCEEEEcCChH
Q 014922 165 LPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYET-PEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 165 l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~ 219 (416)
+.+.|.+.+ +.+|++++.|++|+.+ ++...|++.. .+|+ .++++|.||+++...
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhccccCCeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 445555544 6699999999999984 3312455432 1442 478999999998753
No 198
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=60.10 E-value=12 Score=36.64 Aligned_cols=51 Identities=10% Similarity=0.157 Sum_probs=37.1
Q ss_pred HHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 166 PEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 166 ~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
.+.+.+..+.++++++.|++|+.+++. +.+.. ..+|. ..+.+|+||+|+-.
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~~~-v~v~~-~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEEKT-ITIKN-VTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCE-EEEee-cCCCCEEEEeCCEEEECCCC
Confidence 455566667789999999999987664 66652 23342 36889999999865
No 199
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.86 E-value=13 Score=35.14 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=31.4
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
..|.+|+++++|++|+. ++ +.++ +.+|+ .+++||.||+++..
T Consensus 224 ~~gv~i~~~~~v~~i~~--~~-v~v~--~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 224 KLGIALHLGHSVEGYEN--GC-LLAN--DGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHTCEEETTCEEEEEET--TE-EEEE--CSSSCCCEECCSCEEECCCE
T ss_pred HCCCEEEECCEEEEEEe--CC-EEEE--ECCCceEEEECCEEEECcCC
Confidence 34679999999999986 43 6664 34452 37899999999865
No 200
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=59.82 E-value=11 Score=35.42 Aligned_cols=47 Identities=2% Similarity=-0.074 Sum_probs=31.0
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCC
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVP 217 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p 217 (416)
....+..|.+|+++++|++|+. ++ ++++-...+| ++++||.||++++
T Consensus 207 ~~~l~~~GV~i~~~~~v~~v~~--~~-v~~~~~~~~g-~~i~~D~vv~a~G 253 (430)
T 3h28_A 207 EDLFAERNIDWIANVAVKAIEP--DK-VIYEDLNGNT-HEVPAKFTMFMPS 253 (430)
T ss_dssp HHHHHHTTCEEECSCEEEEECS--SE-EEEECTTSCE-EEEECSEEEEECE
T ss_pred HHHHHHCCCEEEeCCEEEEEeC--Ce-EEEEecCCCc-eEEeeeEEEECCC
Confidence 3333444679999999999964 33 5553101124 4899999999864
No 201
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=59.43 E-value=12 Score=36.11 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=36.9
Q ss_pred HHHHHHHHHh---ccceecCceeeeEEEcC--CCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 164 MLPEAISKRL---GSKVKLSWKLSGVKKLD--SGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 164 ~l~~~L~~~l---g~~I~l~~~V~~I~~~~--~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.+.+.+.+ +.+++++++|++|+.+. ++.++|++ .+|. ++.||+||+|+-.
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~--~~g~-~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET--ASGA-VLKARSIIIATGA 324 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE--TTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE--CCCC-EEEcCEEEECCCC
Confidence 3445554443 56899999999998642 22377764 5664 7999999999875
No 202
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=59.10 E-value=22 Score=33.26 Aligned_cols=50 Identities=16% Similarity=0.091 Sum_probs=32.9
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCC----ceEEecCEEEEcCC
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG----LVSLRSRSVVMTVP 217 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g----~~~~~ad~VI~a~p 217 (416)
..+...+..|.++++++.|++|+. ++ +.+.....+| ..++.+|.||++++
T Consensus 213 ~~~~~l~~~gI~~~~~~~v~~v~~--~~-v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 213 ILTKGLKEEGIEAYTNCKVTKVED--NK-MYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEET--TE-EEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEC--Ce-EEEEecccCCccccceEEEEeEEEEcCC
Confidence 334444445679999999999974 33 5554222333 24789999999865
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=58.88 E-value=17 Score=34.67 Aligned_cols=41 Identities=10% Similarity=0.107 Sum_probs=30.6
Q ss_pred HhccceecCceeeeEEEcCCCce-EEEEeCCCCceEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEY-SLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v-~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..|.+|++++.|++|+. +++ + .|.. +|. +++||.||+++..
T Consensus 248 ~~GV~i~~~~~v~~i~~-~~~-v~~v~~---~g~-~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 248 EHGIQLAFGETVKEVAG-NGK-VEKIIT---DKN-EYDVDMVILAVGF 289 (490)
T ss_dssp TTTCEEEETCCEEEEEC-SSS-CCEEEE---SSC-EEECSEEEECCCE
T ss_pred hCCeEEEeCCEEEEEEc-CCc-EEEEEE---CCc-EEECCEEEECCCC
Confidence 33679999999999986 343 4 3542 454 7999999999865
No 204
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=57.79 E-value=11 Score=33.46 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=30.0
Q ss_pred CCCCEEEeeccCCC--CchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g--~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||.... .....|+.+|+.||..|...+..
T Consensus 277 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 277 SIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp SSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHh
Confidence 46899999998753 24556999999999999998854
No 205
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=56.56 E-value=11 Score=37.63 Aligned_cols=51 Identities=20% Similarity=0.309 Sum_probs=35.3
Q ss_pred HHHHHHHHh----ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChH
Q 014922 165 LPEAISKRL----GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 165 l~~~L~~~l----g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
+.+.|.+.+ +.+| +++.|+.|..++++.+.|. +.+|. ++.||.||+|+-..
T Consensus 126 ~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~--t~dG~-~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 126 YRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAV--TQMGL-KFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEE--ETTSE-EEEEEEEEECCSTT
T ss_pred HHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEE--ECCCC-EEECCEEEEcCCCC
Confidence 444444443 4577 6789999988777523465 35674 89999999998764
No 206
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=56.46 E-value=11 Score=33.38 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=29.9
Q ss_pred CCCCEEEeeccCCC--CchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAG--VALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g--~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||.... .....|+..|+.||..|...+..
T Consensus 275 ~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 275 NIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp SSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998753 34556999999999999988754
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=56.40 E-value=14 Score=34.67 Aligned_cols=42 Identities=7% Similarity=0.131 Sum_probs=31.6
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.++++++.|+.|+..+. +|++ .+|. ++.||+||+|+-.
T Consensus 71 ~~~gv~~~~~~~v~~i~~~~~---~v~~--~~g~-~~~~d~lviAtG~ 112 (431)
T 1q1r_A 71 AAQNIQLLGGTQVTAINRDRQ---QVIL--SDGR-ALDYDRLVLATGG 112 (431)
T ss_dssp HHTTEEEECSCCEEEEETTTT---EEEE--TTSC-EEECSEEEECCCE
T ss_pred HhCCCEEEeCCEEEEEECCCC---EEEE--CCCC-EEECCEEEEcCCC
Confidence 445678999999999987643 3442 4564 7999999999865
No 208
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=55.69 E-value=11 Score=35.68 Aligned_cols=37 Identities=16% Similarity=0.412 Sum_probs=30.6
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||...+.. +..|+..|+.||..|...|..
T Consensus 408 s~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 408 NMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp SSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 4689999999876554 556999999999999988854
No 209
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=55.39 E-value=13 Score=35.03 Aligned_cols=45 Identities=9% Similarity=0.067 Sum_probs=33.8
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.+++++++|++|+..++. +.++. ..++ .++.||++|+|+-.
T Consensus 69 ~~~gi~~~~~~~V~~id~~~~~-v~v~~-~~~~-~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 69 RRQKIQLLLNREVVAMDVENQL-IAWTR-KEEQ-QWYSYDKLILATGA 113 (452)
T ss_dssp HHTTEEEECSCEEEEEETTTTE-EEEEE-TTEE-EEEECSEEEECCCC
T ss_pred HHCCCEEEECCEEEEEECCCCE-EEEEe-cCce-EEEEcCEEEECCCc
Confidence 3446688999999999987764 77752 2344 48999999999865
No 210
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=55.23 E-value=15 Score=33.17 Aligned_cols=41 Identities=5% Similarity=0.225 Sum_probs=30.2
Q ss_pred cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 175 SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+|++++.|.+|+.++++ +.|++ .+|+....+|.||+++..
T Consensus 230 v~~~~~~~v~~i~~~~~~-~~v~~--~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQ-YHISF--DSGQSVHTPHEPILATGF 270 (369)
T ss_dssp EEEECSCCEEEEEEETTE-EEEEE--SSSCCEEESSCCEECCCB
T ss_pred EEEecCcEEEEEEecCCc-eEEEe--cCCeEeccCCceEEeecc
Confidence 689999999999876554 66764 466533346999998864
No 211
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=54.96 E-value=12 Score=35.54 Aligned_cols=50 Identities=10% Similarity=0.118 Sum_probs=31.3
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.+..+.++++++.|++|+..++. +.+.. ..+|. ..+.+|+||+|+-.
T Consensus 73 ~~~~~~~gi~~~~~~~V~~id~~~~~-v~~~~-~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 73 EFFRINKDVEALVETRAHAIDRAAHT-VEIEN-LRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp --------CEEECSEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHhhhcCcEEEECCEEEEEECCCCE-EEEee-cCCCCEEEEECCEEEEeCCC
Confidence 34444456689999999999987664 66642 12232 37899999999864
No 212
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=54.64 E-value=31 Score=34.27 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=32.2
Q ss_pred cc-ceecCceeeeEEEcCC---CceEEEE-eCCCCc-eEEecCEEEEcCCh
Q 014922 174 GS-KVKLSWKLSGVKKLDS---GEYSLTY-ETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 174 g~-~I~l~~~V~~I~~~~~---~~v~v~~-~~~~g~-~~~~ad~VI~a~p~ 218 (416)
+. +|+.+++|++|..+++ +++.|.. ...+|. ..+.|+.||+|+-.
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 78 8999999999998766 5223432 223453 36899999998865
No 213
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=53.31 E-value=8.6 Score=35.79 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=24.5
Q ss_pred CCCCEEEeeccC------CCCchhHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYV------AGVALGRCVESAYEVASEVS 407 (416)
Q Consensus 376 ~~~~l~~aG~~~------~g~~~~~ai~sg~~aA~~il 407 (416)
.+|+|||||+-. .|..+..|..||+.|++.+.
T Consensus 362 ~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 362 QVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 579999999633 34445669999999998763
No 214
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=52.68 E-value=27 Score=34.90 Aligned_cols=54 Identities=7% Similarity=-0.013 Sum_probs=35.4
Q ss_pred HHHHHHHHh-ccceecCceeeeEEEcCC---CceEEEE-eCCCCc-eEEecCEEEEcCCh
Q 014922 165 LPEAISKRL-GSKVKLSWKLSGVKKLDS---GEYSLTY-ETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~l-g~~I~l~~~V~~I~~~~~---~~v~v~~-~~~~g~-~~~~ad~VI~a~p~ 218 (416)
|.+++.+.. +.+|+.++.|++|..+++ +++.|.. ...+|. ..+.|++||+|+-.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 344443332 679999999999998776 4233432 223443 46899999999864
No 215
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=52.61 E-value=12 Score=36.01 Aligned_cols=50 Identities=12% Similarity=0.101 Sum_probs=38.0
Q ss_pred cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCChHHHHhc
Q 014922 175 SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPSYVASSL 224 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~~~~~~l 224 (416)
-+|.+++.|++|..++++...|.+...++...+.++.||++.-.-...+|
T Consensus 226 l~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~L 275 (526)
T 3t37_A 226 LTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPAL 275 (526)
T ss_dssp EEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHH
T ss_pred eEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcch
Confidence 37999999999999877644455545555567889999999877666665
No 216
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=52.32 E-value=12 Score=36.48 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=38.5
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCC-CCc-eEE---ecCEEEEcCChHHHHhc
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETP-EGL-VSL---RSRSVVMTVPSYVASSL 224 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~-~g~-~~~---~ad~VI~a~p~~~~~~l 224 (416)
+.+.+.+.-+.+|++++.|++|..++++...|.+... +|+ +++ .++.||+|+-.-...+|
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 4444443335689999999999987665344665321 353 123 78999999977554444
No 217
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=51.98 E-value=16 Score=33.84 Aligned_cols=42 Identities=10% Similarity=0.190 Sum_probs=31.8
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.+++++++|+.|+.... +|++ .+|. ++.||++|+|+-.
T Consensus 68 ~~~~i~~~~~~~v~~id~~~~---~v~~--~~g~-~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQTR---TISL--DDGT-TLSADAIVIATGS 109 (410)
T ss_dssp HHTTCEEEESCCEEEEETTTT---EEEE--TTSC-EEECSEEEECCCE
T ss_pred HHCCCEEEeCCEEEEEECCCC---EEEE--CCCC-EEECCEEEEccCC
Confidence 345669999999999987644 4442 4664 8999999999865
No 218
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.10 E-value=19 Score=32.84 Aligned_cols=41 Identities=10% Similarity=0.146 Sum_probs=30.6
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.++++++.|+.|+... .+|+ . +|. ++.||+||+|+-.
T Consensus 71 ~~~~v~~~~g~~v~~id~~~---~~V~-~--~g~-~~~~d~lViATGs 111 (367)
T 1xhc_A 71 RKRGIEIRLAEEAKLIDRGR---KVVI-T--EKG-EVPYDTLVLATGA 111 (367)
T ss_dssp HHHTEEEECSCCEEEEETTT---TEEE-E--SSC-EEECSEEEECCCE
T ss_pred HhCCcEEEECCEEEEEECCC---CEEE-E--CCc-EEECCEEEECCCC
Confidence 34566899999999998653 4554 2 453 7999999999874
No 219
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=49.88 E-value=20 Score=35.61 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=35.0
Q ss_pred ccceecCceeeeEEEcCC--CceEEEEeC-CCCc-eEEecCEEEEcCChHHHHhc
Q 014922 174 GSKVKLSWKLSGVKKLDS--GEYSLTYET-PEGL-VSLRSRSVVMTVPSYVASSL 224 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~--~~v~v~~~~-~~g~-~~~~ad~VI~a~p~~~~~~l 224 (416)
+.+|++++.|++|..+++ +...|++.. .+|+ .++.||.||+++-.....++
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQL 328 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHH
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHH
Confidence 358999999999998753 323455542 2443 47889999999876444443
No 220
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=49.29 E-value=23 Score=33.74 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=35.3
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
+.+.+..+.++++++.|+.|+.+++. +.+.. ..+|+ .++.||+||+|+-.
T Consensus 100 ~~~~~~~gv~~~~~~~v~~i~~~~~~-v~v~~-~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 100 KTFRDKYGIDAKVRHEVTKVDTEKKI-VYAEH-TKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp HHHHHTTCCEEESSEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHHHhhcCCEEEeCCEEEEEECCCCE-EEEEE-cCCCceEEEEcCEEEECCCC
Confidence 34444456789999999999887664 66642 13453 26899999999864
No 221
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=48.40 E-value=15 Score=36.52 Aligned_cols=35 Identities=9% Similarity=0.133 Sum_probs=28.7
Q ss_pred CCCCEEEeeccCCCCchhHHHHHHHHHHHHHHHHh
Q 014922 376 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~~~ai~sg~~aA~~il~~l 410 (416)
.++||||||+-....|.+.|..+|..|+..+...+
T Consensus 377 ~~~gLf~AGqi~g~~Gy~eA~a~G~~AG~naa~~~ 411 (641)
T 3cp8_A 377 PVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKI 411 (641)
T ss_dssp SSBTEEECSGGGTBCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCCccHHHHHHHHHHHHHHHHHHh
Confidence 46899999987766788899999999888776554
No 222
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=47.87 E-value=15 Score=32.78 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=28.6
Q ss_pred CCCCEEEee--ccCC--CCchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGG--NYVA--GVALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG--~~~~--g~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+| |... ...+..|+..|+.+|..|...+..
T Consensus 313 ~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 313 AVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 578999999 5443 234556999999999999998864
No 223
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=47.19 E-value=21 Score=34.13 Aligned_cols=45 Identities=11% Similarity=0.086 Sum_probs=32.6
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.+++++++|+.|+.+++. |.+.. +.++ .+++||+||+|+-.
T Consensus 103 ~~~gv~v~~~~~v~~i~~~~~~-v~v~~-~g~~-~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 103 ESLGAKVYMESPVQSIDYDAKT-VTALV-DGKN-HVETYDKLIFATGS 147 (490)
T ss_dssp HHTTCEEETTCCEEEEETTTTE-EEEEE-TTEE-EEEECSEEEECCCE
T ss_pred HhCCCEEEeCCEEEEEECCCCE-EEEEe-CCcE-EEEECCEEEECCCC
Confidence 3456689999999999877664 66631 2123 47899999999874
No 224
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=46.87 E-value=34 Score=29.90 Aligned_cols=51 Identities=12% Similarity=0.100 Sum_probs=32.1
Q ss_pred HHHHHHHHh---ccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 165 LPEAISKRL---GSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~l---g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+.+.+.+ +.....+..|..+...+++.++|. +.+|. +++||+||+|+-.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~-~~~a~~liiATGs 115 (304)
T 4fk1_A 62 FKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIV--TKDHT-KYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEE--ETTCC-EEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEE--ECCCC-EEEeCEEEEccCC
Confidence 444444443 233455566777766655546765 45664 8999999999864
No 225
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=45.84 E-value=27 Score=32.86 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.0
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCC-ceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEG-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g-~~~~~ad~VI~a~p~ 218 (416)
+..+.++++++.|+.|+.+++. +.+.. ..+| ..+++||+||+|+-.
T Consensus 69 ~~~gv~~~~~~~v~~i~~~~~~-v~v~~-~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 69 SNLGANVQMRHQVTNVDPETKT-IKVKD-LITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp HHTTCEEEESEEEEEEEGGGTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HHcCCEEEeCCEEEEEEcCCCE-EEEEe-cCCCceEEEECCEEEEccCC
Confidence 3456689999999999877664 66642 1222 247999999999874
No 226
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=45.75 E-value=13 Score=36.24 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=30.7
Q ss_pred CCCCEEEeeccCC-CCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVA-GVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~-g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.+++||.|||... ..|+..|..+|.++|+.|+..+...
T Consensus 507 ~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~~~~ 545 (549)
T 3nlc_A 507 NLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIVAA 545 (549)
T ss_dssp TCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3689999997542 3578889999999999999887543
No 227
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=45.74 E-value=9.5 Score=35.74 Aligned_cols=30 Identities=17% Similarity=0.374 Sum_probs=22.1
Q ss_pred CCCCEEEeecc------CCCCchhHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNY------VAGVALGRCVESAYEVASE 405 (416)
Q Consensus 376 ~~~~l~~aG~~------~~g~~~~~ai~sg~~aA~~ 405 (416)
.+++|||||+- +.|..+.-|..||+.|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 57999999942 3344455699999988764
No 228
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=45.41 E-value=30 Score=34.57 Aligned_cols=47 Identities=17% Similarity=0.152 Sum_probs=33.4
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCChH
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPSY 219 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~~ 219 (416)
....+..|.+|++++.|++|+ +++ +.++ .+|+ +++.+|.||+++...
T Consensus 580 ~~~l~~~GV~v~~~~~v~~i~--~~~-v~~~---~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 580 RTTLLSRGVKMIPGVSYQKID--DDG-LHVV---INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHTTCEEECSCEEEEEE--TTE-EEEE---ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHhcCCEEEeCcEEEEEe--CCe-EEEe---cCCeEEEEeCCEEEECCCcc
Confidence 344445577999999999997 344 6663 2452 478999999998753
No 229
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=45.40 E-value=45 Score=32.65 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=29.2
Q ss_pred ccceecCceeeeEEEc------C--CCceEEEEeCCCCceEE--ecCEEEEcCCh
Q 014922 174 GSKVKLSWKLSGVKKL------D--SGEYSLTYETPEGLVSL--RSRSVVMTVPS 218 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~------~--~~~v~v~~~~~~g~~~~--~ad~VI~a~p~ 218 (416)
|.+|++++.|++|+.. + .+.+.+++...+|+ ++ ++|.||+++..
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~-~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGK-KFEEEFETVIFAVGR 393 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSC-EEEEEESEEEECSCE
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCc-EEeccCCEEEEEeCC
Confidence 5689999988888642 2 12255554334564 44 49999999865
No 230
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.30 E-value=23 Score=32.26 Aligned_cols=40 Identities=13% Similarity=0.190 Sum_probs=28.9
Q ss_pred HHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 170 SKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 170 ~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+..|.+|+++++|++|+ .+ .|++ .+| + +++|.||+++..
T Consensus 193 l~~~gV~i~~~~~v~~i~--~~---~v~~--~~g-~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 193 LEETGVKFFLNSELLEAN--EE---GVLT--NSG-F-IEGKVKICAIGI 232 (367)
T ss_dssp HHHTTEEEECSCCEEEEC--SS---EEEE--TTE-E-EECSCEEEECCE
T ss_pred HHHCCCEEEcCCEEEEEE--ee---EEEE--CCC-E-EEcCEEEECcCC
Confidence 334467999999999997 22 3432 467 3 899999998754
No 231
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=44.91 E-value=18 Score=35.83 Aligned_cols=41 Identities=15% Similarity=0.357 Sum_probs=30.4
Q ss_pred ccceecCceeeeEEEcCCCceE-EEEeCCCCceEEecCEEEEcCChH
Q 014922 174 GSKVKLSWKLSGVKKLDSGEYS-LTYETPEGLVSLRSRSVVMTVPSY 219 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v~-v~~~~~~g~~~~~ad~VI~a~p~~ 219 (416)
+.+| ++..|+.|..++++ +. |. +.+|. ++.||.||+|+-..
T Consensus 132 GV~I-~~~~V~~L~~d~g~-V~GV~--t~~G~-~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 132 NIDL-LQDTVIGVSANSGK-FSSVT--VRSGR-AIQAKAAILACGTF 173 (641)
T ss_dssp TEEE-EECCEEEEEEETTE-EEEEE--ETTSC-EEEEEEEEECCTTC
T ss_pred CCEE-EeeEEEEEEecCCE-EEEEE--ECCCc-EEEeCEEEECcCCC
Confidence 4467 46699999887765 55 65 35674 89999999998754
No 232
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=44.89 E-value=22 Score=32.99 Aligned_cols=44 Identities=7% Similarity=0.146 Sum_probs=32.3
Q ss_pred HHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 169 ISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 169 L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
..+..+.+++++++|+.|+.... +|++ .+|. .+.||++|+|+-.
T Consensus 74 ~~~~~~i~~~~~~~v~~id~~~~---~v~~--~~g~-~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 74 FWEDKAVEMKLGAEVVSLDPAAH---TVKL--GDGS-AIEYGKLIWATGG 117 (415)
T ss_dssp HHHHTTEEEEETCCEEEEETTTT---EEEE--TTSC-EEEEEEEEECCCE
T ss_pred HHHHCCcEEEeCCEEEEEECCCC---EEEE--CCCC-EEEeeEEEEccCC
Confidence 33445678999999999987643 4442 4664 8899999999864
No 233
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=44.39 E-value=31 Score=32.30 Aligned_cols=45 Identities=7% Similarity=0.063 Sum_probs=32.3
Q ss_pred HhccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 172 RLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 172 ~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
..+.++++++.|+.|+.+++. +.+.. ..+|+ .+++||+||+|+-.
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~-v~~~~-~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQ-VTVKD-LVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTE-EEEEE-TTTCCEEEEECSEEEECCCE
T ss_pred HCCCEEEECCEEEEEeCCCCE-EEEEe-cCCCceEEEeCCEEEEcCCC
Confidence 346689999999999877664 66641 13453 24899999999864
No 234
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=44.11 E-value=34 Score=32.89 Aligned_cols=43 Identities=19% Similarity=0.185 Sum_probs=30.7
Q ss_pred ccceecCceeeeEEEcCCCce-EEEEeC-CCCc-eEEecCEEEEcCC
Q 014922 174 GSKVKLSWKLSGVKKLDSGEY-SLTYET-PEGL-VSLRSRSVVMTVP 217 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~~~~v-~v~~~~-~~g~-~~~~ad~VI~a~p 217 (416)
+.+|++++.|++|..++++ + .|++.. .+|+ .++.+|.||+++.
T Consensus 405 gV~v~~~~~v~~i~~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 405 NVDIILNAQTTEVKGDGSK-VVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp TEEEECSEEEEEEEECSSS-EEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEeCCEEEEEEcCCCc-EEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 4589999999999876555 4 455532 2343 4688999999865
No 235
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=44.01 E-value=19 Score=35.75 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=29.8
Q ss_pred HhhhcCCCCEEEeeccCCCCchhHHHHHHHHHHHHHHHHh
Q 014922 371 SLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 371 ~l~~~~~~~l~~aG~~~~g~~~~~ai~sg~~aA~~il~~l 410 (416)
.++...++||||||+-....|.+.|..+|..|+......+
T Consensus 378 tle~k~~~gLf~AGqinGttGYeEAaaqGl~AG~nAa~~~ 417 (651)
T 3ces_A 378 TLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLS 417 (651)
T ss_dssp TSBBSSSBTEEECSGGGTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCeEEEEEecCCcChHHHHHHHHHHHHHHHHHh
Confidence 3444347899999977666688889999988887766554
No 236
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=43.79 E-value=44 Score=31.25 Aligned_cols=46 Identities=9% Similarity=0.079 Sum_probs=31.8
Q ss_pred HHHHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 165 LPEAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 165 l~~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
......+..|.++++++.|++++. + .|++ .+|+ ++++|.||+++..
T Consensus 193 ~~~~~l~~~gV~i~~~~~v~~~~~--~---~v~~--~~g~-~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 193 PILDELDKREIPYRLNEEINAING--N---EITF--KSGK-VEHYDMIIEGVGT 238 (437)
T ss_dssp HHHHHHHHTTCCEEESCCEEEEET--T---EEEE--TTSC-EEECSEEEECCCE
T ss_pred HHHHHhhccceEEEeccEEEEecC--C---eeee--cCCe-EEeeeeEEEEece
Confidence 333333444679999999998862 2 3442 4664 8999999999854
No 237
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=43.48 E-value=21 Score=33.06 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=30.2
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.+++++++|+.|+.... +|++ .+|. ++.||+||+|+-.
T Consensus 72 ~~v~~~~~~~v~~i~~~~~---~v~~--~~g~-~~~~d~lviAtG~ 111 (408)
T 2gqw_A 72 PEVEWLLGVTAQSFDPQAH---TVAL--SDGR-TLPYGTLVLATGA 111 (408)
T ss_dssp CSCEEEETCCEEEEETTTT---EEEE--TTSC-EEECSEEEECCCE
T ss_pred CCCEEEcCCEEEEEECCCC---EEEE--CCCC-EEECCEEEECCCC
Confidence 3558999999999987533 4543 4564 7999999999875
No 238
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=43.31 E-value=41 Score=33.54 Aligned_cols=33 Identities=18% Similarity=0.439 Sum_probs=25.3
Q ss_pred CCEEEeeccC------CCCchhHHHHHHHHHHHHHHHHh
Q 014922 378 QGLFLGGNYV------AGVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 378 ~~l~~aG~~~------~g~~~~~ai~sg~~aA~~il~~l 410 (416)
++++++||.. .|.|++.+++.+...|..|..-+
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 7899999864 26678888888888877776544
No 239
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=43.22 E-value=34 Score=32.11 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=32.5
Q ss_pred HHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 169 ISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 169 L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+..+.++++++.|++|+.. + ++|. +.+|..++.||+||+|+-.
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~--~-~~v~--~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTG--Y-VRVR--ENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSS--E-EEEE--CSSSEEEEECSEEEECCCE
T ss_pred HHHhcCcEEEecCEEEEEecC--C-CEEE--ECCceEEEEcCEEEECCCC
Confidence 334456689999999999653 2 5564 4555347899999999864
No 240
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=43.22 E-value=16 Score=34.14 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=28.3
Q ss_pred CCCCEEEeeccCCC---------Cchh----HHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVAG---------VALG----RCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~g---------~~~~----~ai~sg~~aA~~il~~l~~~ 413 (416)
.+++||-+||...- .+.+ .|.+.|..+|+.|++.+...
T Consensus 285 ~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999996531 1122 49999999999999888653
No 241
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=41.88 E-value=16 Score=34.89 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=30.3
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.+.++++++.|++|+..+. +|++ .+|. ++.||+||+|+-.
T Consensus 103 ~gv~~~~g~~v~~id~~~~---~V~~--~~g~-~i~yd~lviATGs 142 (493)
T 1m6i_A 103 GGVAVLTGKKVVQLDVRDN---MVKL--NDGS-QITYEKCLIATGG 142 (493)
T ss_dssp CEEEEEETCCEEEEEGGGT---EEEE--TTSC-EEEEEEEEECCCE
T ss_pred CCeEEEcCCEEEEEECCCC---EEEE--CCCC-EEECCEEEECCCC
Confidence 3568999999999987644 4442 4674 7999999999854
No 242
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=41.05 E-value=31 Score=33.89 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=34.4
Q ss_pred cceecCceeeeEEEc----CCCceEEEEeCCCCc-eEEecC-EEEEcCChHHHHhc
Q 014922 175 SKVKLSWKLSGVKKL----DSGEYSLTYETPEGL-VSLRSR-SVVMTVPSYVASSL 224 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~----~~~~v~v~~~~~~g~-~~~~ad-~VI~a~p~~~~~~l 224 (416)
-+|.+++.|++|..+ +++.+.|.+...+|. .++.|+ .||++.-.-...+|
T Consensus 242 L~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqL 297 (583)
T 3qvp_A 242 LQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTI 297 (583)
T ss_dssp EEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHH
T ss_pred cEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHH
Confidence 489999999999987 333344666534553 467786 69999876555544
No 243
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=40.91 E-value=27 Score=31.35 Aligned_cols=35 Identities=14% Similarity=0.333 Sum_probs=27.7
Q ss_pred CCCEEEeec---cCC-----CCchhHHHHHHHHHHHHHHHHhh
Q 014922 377 YQGLFLGGN---YVA-----GVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 377 ~~~l~~aG~---~~~-----g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
+|+||++|- +++ |.-+++-+.||+.||+.|++.+.
T Consensus 283 ~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 589999993 222 44467799999999999999875
No 244
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=39.71 E-value=28 Score=31.84 Aligned_cols=45 Identities=16% Similarity=0.291 Sum_probs=32.2
Q ss_pred HHHHHHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 167 EAISKRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 167 ~~L~~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+.+.+..+.++++++.|+.|+..+. +|++ .++ ++.||+||+|+-.
T Consensus 67 ~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~--~~~--~~~~d~lviAtG~ 111 (384)
T 2v3a_A 67 GAMAEQLNARILTHTRVTGIDPGHQ---RIWI--GEE--EVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHHHTTCEEECSCCCCEEEGGGT---EEEE--TTE--EEECSEEEECCCE
T ss_pred HHHHHhCCcEEEeCCEEEEEECCCC---EEEE--CCc--EEECCEEEEeCCC
Confidence 3444555678999999999987543 4442 333 7899999999875
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=38.03 E-value=31 Score=32.32 Aligned_cols=39 Identities=8% Similarity=0.057 Sum_probs=28.6
Q ss_pred cceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 175 SKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
.++++++.|.+|+.++ + +.+.. + +|. +++||.||+++..
T Consensus 204 v~i~~~~~v~~i~~~~-~-v~~v~-~-~g~-~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 204 VNLRLQEITMKIEGEE-R-VEKVV-T-DAG-EYKAELVILATGI 242 (449)
T ss_dssp SEEEESCCEEEEECSS-S-CCEEE-E-TTE-EEECSEEEECSCE
T ss_pred cEEEeCCeEEEEeccC-c-EEEEE-e-CCC-EEECCEEEEeeCC
Confidence 5899999999998654 3 43222 2 453 8999999999854
No 246
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=37.50 E-value=44 Score=32.32 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=35.4
Q ss_pred hccceecCceeeeEEEcCC---CceEEEEeCCCCc-eEE---ecCEEEEcCChHHHHhc
Q 014922 173 LGSKVKLSWKLSGVKKLDS---GEYSLTYETPEGL-VSL---RSRSVVMTVPSYVASSL 224 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~---~~v~v~~~~~~g~-~~~---~ad~VI~a~p~~~~~~l 224 (416)
.+.+|++++.|++|..+++ +.+.|.+...+|. .++ .++.||+|+-.-...+|
T Consensus 207 ~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~l 265 (536)
T 1ju2_A 207 NNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQL 265 (536)
T ss_dssp TTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHH
T ss_pred CCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHH
Confidence 3468999999999998763 3344665443554 234 46899999877555554
No 247
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=37.41 E-value=41 Score=32.05 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=37.1
Q ss_pred hHHHHHHHHHh--ccceecCceeeeEEEcCCCceEEEEeCCCCc-eEEecCEEEEcCCh
Q 014922 163 TMLPEAISKRL--GSKVKLSWKLSGVKKLDSGEYSLTYETPEGL-VSLRSRSVVMTVPS 218 (416)
Q Consensus 163 ~~l~~~L~~~l--g~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~-~~~~ad~VI~a~p~ 218 (416)
..+.+.+.+.+ +.++++++.|.+|..+++. +.+... .++. ..+.+|++|+|+-.
T Consensus 161 ~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~-~~~~~~-~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 161 RKVVEELVGKLNENTKIYLETSALGVFDKGEY-FLVPVV-RGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHHHHHTCCTTEEEETTEEECCCEECSSS-EEEEEE-ETTEEEEEEESCEEECCCE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcE-EEEEEe-cCCeEEEEECCEEEECCCC
Confidence 34556666554 4578999999999987765 655421 2342 36899999999864
No 248
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=36.62 E-value=49 Score=33.39 Aligned_cols=43 Identities=12% Similarity=-0.004 Sum_probs=29.2
Q ss_pred hccceecCceeeeEEEcCCCceEEEEeCCCCceE------------------EecCEEEEcCCh
Q 014922 173 LGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVS------------------LRSRSVVMTVPS 218 (416)
Q Consensus 173 lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~------------------~~ad~VI~a~p~ 218 (416)
.|.+|++++.|++|+. ++ +++.....++.+. +.||.||+++..
T Consensus 584 ~GV~i~~~~~v~~i~~--~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 584 LHVEELGDHFCSRIEP--GR-MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp TTCEEECSEEEEEEET--TE-EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred CCCEEEcCcEEEEEEC--Ce-EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 3679999999999974 33 5554321222122 899999999865
No 249
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=36.00 E-value=40 Score=31.35 Aligned_cols=38 Identities=21% Similarity=0.093 Sum_probs=29.4
Q ss_pred CCCCEEEeeccCCCC-------------chhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVAGV-------------ALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~-------------~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.+++||.+||..... ....|+..|..||+.|+..+...
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 368999999976532 12459999999999999988654
No 250
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=35.44 E-value=31 Score=34.15 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=29.2
Q ss_pred HhhhcCCCCEEEeeccCCCCchhHHHHHHHHHHHHHHHHh
Q 014922 371 SLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 371 ~l~~~~~~~l~~aG~~~~g~~~~~ai~sg~~aA~~il~~l 410 (416)
.++...++||||||+-....|.+.|..+|..|+......+
T Consensus 383 tLe~k~~~gLf~AGqinGt~GyeEAaaqGl~AG~nAa~~~ 422 (637)
T 2zxi_A 383 TLETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRA 422 (637)
T ss_dssp TSBBSSSBTEEECGGGGTBCSHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCEEEeeecCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3444247899999987766788888888888887665544
No 251
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=35.11 E-value=27 Score=31.62 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=29.2
Q ss_pred CCCEEEeecc---C-----CCCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 377 YQGLFLGGNY---V-----AGVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 377 ~~~l~~aG~~---~-----~g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
+|+||++|-. + -|.-.++-+.||++||+.|++.|...
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~ 337 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLR 337 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhh
Confidence 5899999932 2 25556779999999999999988654
No 252
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=34.48 E-value=26 Score=32.68 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=29.0
Q ss_pred HhhhcCCCCEEEeeccCCCCchhHHHHHHHHHHHHHHHHh
Q 014922 371 SLRDNGYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 371 ~l~~~~~~~l~~aG~~~~g~~~~~ai~sg~~aA~~il~~l 410 (416)
.++...++||||||+-..-.|...|..+|..|+..+...+
T Consensus 322 tle~k~~~~Lf~AGqi~G~~Gy~eAaa~Gl~AG~naa~~~ 361 (443)
T 3g5s_A 322 TLEFREAEGLYAAGVLAGVEGYLESAATGFLAGLNAARKA 361 (443)
T ss_dssp TSEETTEEEEEECGGGGTBCSHHHHHHHHHHHHHHHHHHH
T ss_pred hceecCCCCEEECccccccHHHHHHHHhHHHHHHHHHHHh
Confidence 3443246899999987666778888888888887665544
No 253
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=34.46 E-value=38 Score=33.20 Aligned_cols=51 Identities=14% Similarity=0.110 Sum_probs=34.3
Q ss_pred ccceecCceeeeEEEc--CCCceEEEEeCCCCc-eEEec-CEEEEcCChHHHHhc
Q 014922 174 GSKVKLSWKLSGVKKL--DSGEYSLTYETPEGL-VSLRS-RSVVMTVPSYVASSL 224 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~--~~~~v~v~~~~~~g~-~~~~a-d~VI~a~p~~~~~~l 224 (416)
+-+|.+++.|++|..+ +++.+.|.+...+|. .++.| ..||+++-.-...+|
T Consensus 220 Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~l 274 (577)
T 3q9t_A 220 NITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKL 274 (577)
T ss_dssp TEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred CeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHH
Confidence 3489999999999987 443334655444353 45677 569999876555554
No 254
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=32.94 E-value=46 Score=31.05 Aligned_cols=38 Identities=13% Similarity=0.020 Sum_probs=29.1
Q ss_pred CCCCEEEeeccCCCC-------------chhHHHHHHHHHHHHHHHHhhhc
Q 014922 376 GYQGLFLGGNYVAGV-------------ALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~-------------~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.+++||.+||..... ....|+..|..+|+.|+..+...
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 368999999976422 12349999999999999988543
No 255
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=32.76 E-value=52 Score=30.23 Aligned_cols=41 Identities=7% Similarity=0.149 Sum_probs=29.8
Q ss_pred HHhccceecCceeeeEEEcCCCceEEEEeCCCCceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKLDSGEYSLTYETPEGLVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~~~~~v~v~~~~~~g~~~~~ad~VI~a~p~ 218 (416)
+..+.++++ ++|++|+.... +|++ .+|. ++.||++|+|+-.
T Consensus 68 ~~~~i~~~~-~~v~~id~~~~---~v~~--~~g~-~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 68 QDQAIELIS-DRMVSIDREGR---KLLL--ASGT-AIEYGHLVLATGA 108 (404)
T ss_dssp HHTTEEEEC-CCEEEEETTTT---EEEE--SSSC-EEECSEEEECCCE
T ss_pred HhCCCEEEE-EEEEEEECCCC---EEEE--CCCC-EEECCEEEEeeCC
Confidence 344568888 99999987644 3432 4664 8899999999865
No 256
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=32.64 E-value=39 Score=33.02 Aligned_cols=50 Identities=16% Similarity=0.209 Sum_probs=34.6
Q ss_pred cceecCceeeeEEEc----C-CCceEEEEeCCCC--ceEEec-CEEEEcCChHHHHhc
Q 014922 175 SKVKLSWKLSGVKKL----D-SGEYSLTYETPEG--LVSLRS-RSVVMTVPSYVASSL 224 (416)
Q Consensus 175 ~~I~l~~~V~~I~~~----~-~~~v~v~~~~~~g--~~~~~a-d~VI~a~p~~~~~~l 224 (416)
-+|.+++.|++|..+ + ++.+.|.+...+| ..++.| +.||++.-.-...+|
T Consensus 223 L~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPql 280 (566)
T 3fim_B 223 LSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPIL 280 (566)
T ss_dssp EEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHH
T ss_pred eEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHH
Confidence 489999999999887 3 2334566654434 256778 679999877555555
No 257
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=32.17 E-value=35 Score=31.25 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=28.9
Q ss_pred CCCCEEEeeccCCCCch----hHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAGVAL----GRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~----~~ai~sg~~aA~~il~~l~~ 412 (416)
.++|||-+||...+... ..|...|..+|+.|+..+..
T Consensus 285 ~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G 325 (401)
T 3vrd_B 285 LQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKG 325 (401)
T ss_dssp SSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999997654322 34899999999999988854
No 258
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=31.74 E-value=44 Score=30.74 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=28.0
Q ss_pred CCCCEEEeeccCC--C-CchhHHHHHHHHHHHHHHHHh
Q 014922 376 GYQGLFLGGNYVA--G-VALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 376 ~~~~l~~aG~~~~--g-~~~~~ai~sg~~aA~~il~~l 410 (416)
.++|||.+||... . .....|...|..||+.|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3689999999764 1 223459999999999999988
No 259
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=30.57 E-value=31 Score=32.59 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=28.4
Q ss_pred hhhcCCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHHH
Q 014922 372 LRDNGYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 409 (416)
Q Consensus 372 l~~~~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~~ 409 (416)
+++ ..++||.+||...+.. ...|+..|+.||+.|+..
T Consensus 306 ~~t-~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 306 CAT-SVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp SBC-SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred ccc-CCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 344 5789999999875443 345999999999999754
No 260
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=30.28 E-value=34 Score=33.59 Aligned_cols=51 Identities=8% Similarity=0.115 Sum_probs=34.0
Q ss_pred ccceecCceeeeEEEcC----CCceEEEEeCCCCc-eEEec-CEEEEcCChHHHHhc
Q 014922 174 GSKVKLSWKLSGVKKLD----SGEYSLTYETPEGL-VSLRS-RSVVMTVPSYVASSL 224 (416)
Q Consensus 174 g~~I~l~~~V~~I~~~~----~~~v~v~~~~~~g~-~~~~a-d~VI~a~p~~~~~~l 224 (416)
+.+|++++.|++|..++ ++.+.|.+...+|. .++.| +.||+++-.-...+|
T Consensus 245 nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~l 301 (587)
T 1gpe_A 245 NLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLI 301 (587)
T ss_dssp TEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHH
T ss_pred CcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHH
Confidence 45899999999998764 22234555323453 46788 889999876444443
No 261
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=28.24 E-value=33 Score=32.41 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=29.3
Q ss_pred CCCEEEeeccCCCC-c-hhHHHHHHHHHHHHHHHHhhhc
Q 014922 377 YQGLFLGGNYVAGV-A-LGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 377 ~~~l~~aG~~~~g~-~-~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.++||.+||...+. + +..|+..|+.+|..|+.++...
T Consensus 359 ~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 359 VPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp CTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 58999999876432 3 4579999999999999888653
No 262
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=27.08 E-value=52 Score=34.49 Aligned_cols=37 Identities=5% Similarity=0.078 Sum_probs=31.0
Q ss_pred CCCCEEEeeccCCCCchhHHHHHHHHHHHHHHHHhhh
Q 014922 376 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~~~ai~sg~~aA~~il~~l~~ 412 (416)
..++||.+||.....++..|+..|+.||..|+..++.
T Consensus 409 s~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 409 AVANQHLAGAMTGRLDTASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp CCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEecCCchhHHHHHHHHHHHHHHHHHHcCC
Confidence 4689999999876556678999999999999988753
No 263
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=26.30 E-value=63 Score=30.23 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=28.1
Q ss_pred CCEEEeeccC------CCCchhHHHHHHHHHHHHHHHHhh
Q 014922 378 QGLFLGGNYV------AGVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 378 ~~l~~aG~~~------~g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
+|+.++||.. .|.|++.|+.+|..+|+.|...+.
T Consensus 282 ~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~ 321 (453)
T 3atr_A 282 NGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFE 321 (453)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 7899999853 367888999999999999876653
No 264
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=26.29 E-value=23 Score=35.51 Aligned_cols=36 Identities=19% Similarity=0.051 Sum_probs=30.0
Q ss_pred CCCCEEEeeccCCCCchhHHHHHHHHHHHHHHHHhh
Q 014922 376 GYQGLFLGGNYVAGVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
..++||.+||......+..|+..|+.||..|...+.
T Consensus 640 ~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 640 EIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp SCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhcc
Confidence 468999999988766667799999999999987653
No 265
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=26.21 E-value=37 Score=32.89 Aligned_cols=35 Identities=17% Similarity=0.371 Sum_probs=26.3
Q ss_pred CCCCEEEeeccC----C------CCchhHHHHHHHHHHHHHHHHh
Q 014922 376 GYQGLFLGGNYV----A------GVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 376 ~~~~l~~aG~~~----~------g~~~~~ai~sg~~aA~~il~~l 410 (416)
++++||-||+.. + |.++..|+..|+.|++.+...+
T Consensus 366 ~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 366 DVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 689999999643 1 2234569999999999987654
No 266
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=26.12 E-value=30 Score=32.89 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=26.9
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 409 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~~ 409 (416)
..++||.+||...+.. ...|+..|+.||+.|+..
T Consensus 329 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 329 SIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCC
Confidence 4689999999875443 345999999999998753
No 267
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=26.12 E-value=51 Score=31.39 Aligned_cols=36 Identities=11% Similarity=0.264 Sum_probs=28.5
Q ss_pred hhhcCCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHH
Q 014922 372 LRDNGYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSN 408 (416)
Q Consensus 372 l~~~~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~ 408 (416)
+++ ..++||.+||......+ ..|+..|+.||..|+.
T Consensus 301 ~~t-~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 301 LQT-SVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp CBC-SSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred ccC-CCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 444 56899999998765444 3699999999999986
No 268
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=25.95 E-value=50 Score=31.09 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=28.4
Q ss_pred hhhcCCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHHH
Q 014922 372 LRDNGYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 409 (416)
Q Consensus 372 l~~~~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~~ 409 (416)
+++ ..++||.+||...... ...|+..|+.||+.|+..
T Consensus 296 ~~t-~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 296 MKT-NIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CBC-SSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred ccC-CCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 344 5689999999876443 345999999999999853
No 269
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=25.76 E-value=44 Score=28.99 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=28.9
Q ss_pred CCCEEEeeccC--------CCCchhHHHHHHHHHHHHHHHHhhhc
Q 014922 377 YQGLFLGGNYV--------AGVALGRCVESAYEVASEVSNFLSQY 413 (416)
Q Consensus 377 ~~~l~~aG~~~--------~g~~~~~ai~sg~~aA~~il~~l~~~ 413 (416)
.+++|.+|+.. -+.....++.||..+|..|...|+..
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhh
Confidence 58999999643 13445679999999999999988654
No 270
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=25.49 E-value=29 Score=33.78 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCCCEEEeeccCC---------CCchhHHHHHHHHHHHHHHHHhh
Q 014922 376 GYQGLFLGGNYVA---------GVALGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 376 ~~~~l~~aG~~~~---------g~~~~~ai~sg~~aA~~il~~l~ 411 (416)
++++||-||+... |.++..|+..|+.|++.+.....
T Consensus 520 ~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 520 PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 6899999996432 22355699999999999876543
No 271
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=25.43 E-value=82 Score=33.00 Aligned_cols=48 Identities=6% Similarity=-0.054 Sum_probs=32.5
Q ss_pred HHhccceecCceeeeEEEc-CCCceEEEEeC--C---CC-ceEEecCEEEEcCCh
Q 014922 171 KRLGSKVKLSWKLSGVKKL-DSGEYSLTYET--P---EG-LVSLRSRSVVMTVPS 218 (416)
Q Consensus 171 ~~lg~~I~l~~~V~~I~~~-~~~~v~v~~~~--~---~g-~~~~~ad~VI~a~p~ 218 (416)
+..|.+|++++.|++|+.+ +++...|++.. . +| .++++||.||+++..
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 4456799999999999874 34312455432 1 24 247899999999853
No 272
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=24.91 E-value=51 Score=30.99 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=27.1
Q ss_pred CCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSNF 409 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~~ 409 (416)
..++||.+||...+..+ ..|+..|+.||+.|+..
T Consensus 297 ~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 297 STPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp SSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 57899999998764443 45999999999999753
No 273
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.76 E-value=91 Score=29.11 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=26.3
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+.. ...|+..|+.||+.|+.
T Consensus 299 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 299 SVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 4689999999876544 34599999999999874
No 274
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=24.70 E-value=41 Score=31.75 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=28.3
Q ss_pred CCCEEEeeccCCCC-c-hhHHHHHHHHHHHHHHHHhhh
Q 014922 377 YQGLFLGGNYVAGV-A-LGRCVESAYEVASEVSNFLSQ 412 (416)
Q Consensus 377 ~~~l~~aG~~~~g~-~-~~~ai~sg~~aA~~il~~l~~ 412 (416)
.++||.+||...+. + +..|+..|..+|..|+.++..
T Consensus 351 ~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 351 SPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp CSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999875433 2 456999999999999988754
No 275
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=24.57 E-value=29 Score=33.81 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=26.3
Q ss_pred CCCCEEEeeccC---C------CCchhHHHHHHHHHHHHHHHHh
Q 014922 376 GYQGLFLGGNYV---A------GVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 376 ~~~~l~~aG~~~---~------g~~~~~ai~sg~~aA~~il~~l 410 (416)
++++||-||+.. + |.++..|+..|+.|++.+....
T Consensus 525 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 525 VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 689999999642 2 2345569999999999987654
No 276
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=24.32 E-value=55 Score=30.73 Aligned_cols=33 Identities=6% Similarity=0.015 Sum_probs=26.6
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+.. ...|+..|+.||+.|+.
T Consensus 300 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 300 NVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 4689999999876544 34599999999999975
No 277
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=24.26 E-value=59 Score=30.64 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=26.8
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+.. ...|+..|+.||+.|+.
T Consensus 316 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 316 KFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 5689999999876443 34599999999999986
No 278
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=23.83 E-value=56 Score=30.95 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=26.7
Q ss_pred CCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSNF 409 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~~ 409 (416)
..++||.+||...+..+ ..|+..|+.||+.|+..
T Consensus 317 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 317 NVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 56899999998764443 45999999999999854
No 279
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=23.39 E-value=62 Score=34.18 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=29.4
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHHHhh
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNFLS 411 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~~l~ 411 (416)
..++||.+||-..+.. +..|+..|+.||..|...+.
T Consensus 472 s~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 472 SEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp SSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876543 45699999999999998765
No 280
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=23.35 E-value=70 Score=31.25 Aligned_cols=56 Identities=13% Similarity=0.239 Sum_probs=37.7
Q ss_pred HHHHHHHHH---hccceecCceeeeEEEcCCCceE-EEEeC----CCCc--------eEEecCEEEEcCChH
Q 014922 164 MLPEAISKR---LGSKVKLSWKLSGVKKLDSGEYS-LTYET----PEGL--------VSLRSRSVVMTVPSY 219 (416)
Q Consensus 164 ~l~~~L~~~---lg~~I~l~~~V~~I~~~~~~~v~-v~~~~----~~g~--------~~~~ad~VI~a~p~~ 219 (416)
.+.+.|.+. .|.+|+++++|++|..++++.+. |++.. .+|+ .+++||.||.|.-..
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 344444443 46799999999999987754343 65421 1331 378999999998664
No 281
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=22.27 E-value=63 Score=30.48 Aligned_cols=34 Identities=9% Similarity=0.256 Sum_probs=26.8
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSNF 409 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~~ 409 (416)
..++||.+||...+.. ...|+..|+.||+.|+..
T Consensus 322 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 322 NVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp SSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 4689999999874433 445999999999998754
No 282
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=21.95 E-value=35 Score=32.73 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=24.2
Q ss_pred CCCCEEEeeccCC---------CCchhHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVA---------GVALGRCVESAYEVASEVS 407 (416)
Q Consensus 376 ~~~~l~~aG~~~~---------g~~~~~ai~sg~~aA~~il 407 (416)
|+++||-||+... |.++..|+.+|+.|++.+.
T Consensus 467 ~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 467 PIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp EEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 6899999996432 2335569999999998875
No 283
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=21.77 E-value=57 Score=30.77 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=26.6
Q ss_pred CCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+..+ ..|...|+.||+.|+.
T Consensus 311 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 311 KIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcC
Confidence 46899999998765443 4599999999999875
No 284
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.48 E-value=1.3e+02 Score=28.14 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=26.4
Q ss_pred CCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~ 408 (416)
..++||.+||......+ ..|+..|+.||+.|+.
T Consensus 308 ~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 308 NVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp SSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 46899999998764443 4599999999999875
No 285
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=21.38 E-value=68 Score=30.02 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=26.3
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...... ...|+..|+.+|+.|+.
T Consensus 294 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 294 NIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 4689999999875433 34599999999999975
No 286
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=21.24 E-value=70 Score=30.22 Aligned_cols=33 Identities=9% Similarity=0.185 Sum_probs=26.3
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...... ...|+..|+.||+.|+.
T Consensus 313 ~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 313 NVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp SSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcC
Confidence 4689999999865433 44599999999999874
No 287
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=21.21 E-value=33 Score=33.53 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=26.3
Q ss_pred CCCCEEEeeccC---C------CCchhHHHHHHHHHHHHHHHHh
Q 014922 376 GYQGLFLGGNYV---A------GVALGRCVESAYEVASEVSNFL 410 (416)
Q Consensus 376 ~~~~l~~aG~~~---~------g~~~~~ai~sg~~aA~~il~~l 410 (416)
++++||-||+.. + |.++..|+..|++|++.+....
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 689999999643 2 2345569999999999987643
No 288
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=20.30 E-value=80 Score=29.48 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=26.5
Q ss_pred CCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+..+ ..|...|+.||+.|+.
T Consensus 293 ~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 293 RVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcC
Confidence 46899999998765443 3499999999999985
No 289
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=20.29 E-value=1.2e+02 Score=27.23 Aligned_cols=27 Identities=4% Similarity=0.092 Sum_probs=19.2
Q ss_pred HHHHHHHHHh----ccceecCceeeeEEEcC
Q 014922 164 MLPEAISKRL----GSKVKLSWKLSGVKKLD 190 (416)
Q Consensus 164 ~l~~~L~~~l----g~~I~l~~~V~~I~~~~ 190 (416)
.+.+.|.+.+ +.+|+.++.|++|..++
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRK 191 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecC
Confidence 3445555543 45899999999998765
No 290
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=20.23 E-value=65 Score=30.30 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=26.2
Q ss_pred CCCCEEEeeccCCCCch-hHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVAL-GRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~~-~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+..+ ..|+..|+.||+.|+.
T Consensus 300 ~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 300 SVPGVYAIGDAARPPLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp SSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 46899999998765443 4599999999999874
No 291
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=20.18 E-value=73 Score=30.22 Aligned_cols=33 Identities=9% Similarity=0.112 Sum_probs=26.5
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...+.. ...|+..|+.||+.|+.
T Consensus 317 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 317 NVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp SSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 4689999999876433 44599999999999874
No 292
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=20.10 E-value=66 Score=30.42 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=26.4
Q ss_pred CCCCEEEeeccCCCCc-hhHHHHHHHHHHHHHHH
Q 014922 376 GYQGLFLGGNYVAGVA-LGRCVESAYEVASEVSN 408 (416)
Q Consensus 376 ~~~~l~~aG~~~~g~~-~~~ai~sg~~aA~~il~ 408 (416)
..++||.+||...... ...|+..|+.||+.|+.
T Consensus 315 ~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 315 NVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcC
Confidence 4689999999876444 34599999999999875
Done!