BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014923
(416 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14197|YDQ4_SCHPO Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1
Length = 452
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 173/414 (41%), Gaps = 35/414 (8%)
Query: 15 LKVLLVTALGLVLAIDRIDLLGHSVTHSLNNLVFYVFNPALIGSNLAETITYQSLISLWF 74
L+V+++ G VLA + L +++L Y F P L+ + + + LI L
Sbjct: 24 LEVIVIALGGYVLA--KKGFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMLIDLSL 81
Query: 75 MPVNILLSFLIGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNS- 133
+PV ++ ++++L K+ R P + C + N +L L +V ++
Sbjct: 82 LPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPLALVSSLATTVKDL 141
Query: 134 -----PFGDTSVCSSYGKAYASL-SMVGAIYIWTYVYYVM--------SLYL-NKSVSDA 178
P +S G Y + S +G W+Y Y ++ L + N+S S +
Sbjct: 142 LWDKIPDDTPDKVASRGIMYLLIFSQLGQALRWSYGYRILLSPNQPEDPLPIGNRSWSHS 201
Query: 179 GTNKDSRIHIISSGESSTNI--FLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRFPFLD 236
N++ ++++S + + ++++ + + + +Q ET +
Sbjct: 202 DVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQVET--SNEEVGGFG 259
Query: 237 KMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLR-VLDSSAALV 295
+I+KF + L F+P + I I + P ++ E + + + S +
Sbjct: 260 AASSKISKFI--VLLLDFFSPPLYSLFIALFIAVVPPLQRFFFEEGSFVEGSITSGIRMA 317
Query: 296 GEAAIPAMTLVIGANLLSGLK--------RSGVGVSLIMGIIAIRYILLPLLGIVIVKAA 347
G+ A+P + +V+GA+L + + R +I+ + R +++PL +
Sbjct: 318 GQVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVIIVCLLGRMVVVPLALLPAFSLL 377
Query: 348 YRFGFIGS--DSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAV 399
F I + D ++ ++ L P A+ + I QL E EC+ +L W+YAV
Sbjct: 378 SYFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWWSYAV 431
>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1
Length = 427
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 236 DKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLR-VLDSSAAL 294
DK+ Q+ E+I + P + I V+ I P ++ + E + +
Sbjct: 237 DKIWQKSCTVFERIRANL--NPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQ 294
Query: 295 VGEAAIPAMTLVIGANLLSGLK---RSGVGVSLIMGIIAIRYILLP--LLGIVIVKAAYR 349
+G +IP + +V+G+NL + ++ L++G I R IL LL I+ + Y
Sbjct: 295 LGSVSIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYI 354
Query: 350 FGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTL 406
I D ++ + L PPA+ + I QL E E+E + IL W YAV + +++
Sbjct: 355 NVSILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVLSLPVSI 411
>sp|P42432|NASA_BACSU Nitrate transporter OS=Bacillus subtilis (strain 168) GN=nasA PE=2
SV=2
Length = 401
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 100 PPHLQGLVIGCCSAGNMGNLLLIIV-PAVCEE 130
PPHLQGL +G AGN G L + P + E+
Sbjct: 131 PPHLQGLAMGIAGAGNSGTLFATLFGPRLAEQ 162
>sp|Q7MFC2|MALF_VIBVY Maltose transport system permease protein MalF OS=Vibrio vulnificus
(strain YJ016) GN=malF PE=3 SV=1
Length = 523
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 286 RVLDSSAALVGEAAIPAMTLVIGANLL------SGLKRSGVGVSLIMGIIAIRYILLPLL 339
+ +D + VG P + IG + G+K + + + + +I +LL L+
Sbjct: 247 QAMDEAGNFVGNTVSPGFVVQIGTDNFERVWKDDGIKEPFISIFIWTVVFSILTVLLTLM 306
Query: 340 GIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVIL 393
+++ + ++ + ++Y+ +L+L YAVP +++ LF S E +++L
Sbjct: 307 IGLVLASVVQWEELKGRAIYRVLLILPYAVPAFISILIFKGLFNQSFGEINMVL 360
>sp|Q8D3U8|MALF_VIBVU Maltose transport system permease protein MalF OS=Vibrio vulnificus
(strain CMCP6) GN=malF PE=3 SV=1
Length = 523
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 286 RVLDSSAALVGEAAIPAMTLVIGANLL------SGLKRSGVGVSLIMGIIAIRYILLPLL 339
+ +D + VG P + IG + G+K + + + + +I +LL L+
Sbjct: 247 QAMDEAGNFVGNTVSPGFVVQIGTDNFERVWKDDGIKEPFISIFIWTVVFSILTVLLTLM 306
Query: 340 GIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVIL 393
+++ + ++ + ++Y+ +L+L YAVP +++ LF S E +++L
Sbjct: 307 IGLVLASVVQWEELKGRAIYRVLLILPYAVPAFISILIFKGLFNQSFGEINMVL 360
>sp|Q2KIV1|S22A9_BOVIN Solute carrier family 22 member 9 OS=Bos taurus GN=SLC22A9 PE=2
SV=1
Length = 552
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 85 IGSALAWILIKITRTPPHLQGLVIGCCSAGNMGNLLLIIVPAVCEESNSPFGDT 138
IG+ALA +L+ +T PHL ++ G CS +G L +VP + E N P D+
Sbjct: 478 IGAALAPLLMILTVYSPHLPWIIYGVCSI--LGGL---VVPLLPETRNKPLPDS 526
>sp|Q55DV2|GDT6_DICDI Probable inactive serine/threonine-protein kinase gdt6
OS=Dictyostelium discoideum GN=gdt6 PE=3 SV=1
Length = 1452
Score = 32.0 bits (71), Expect = 8.9, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 DLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGA 309
D K+IF+P+ + +IGF+ GT FR + E + ++ + + + + + G+
Sbjct: 341 DTKLIFSPNNTSEVIGFINGTNQRFRSSLYIEFSNNVIIKNCVIIESSSETRSPLVFFGS 400
Query: 310 N--LLSGLKRSGVGVSLI 325
N L L S G SLI
Sbjct: 401 NVYLSDNLISSKSGSSLI 418
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,055,727
Number of Sequences: 539616
Number of extensions: 5680590
Number of successful extensions: 19683
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 19665
Number of HSP's gapped (non-prelim): 34
length of query: 416
length of database: 191,569,459
effective HSP length: 120
effective length of query: 296
effective length of database: 126,815,539
effective search space: 37537399544
effective search space used: 37537399544
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)