Query 014925
Match_columns 416
No_of_seqs 185 out of 1130
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 03:34:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014925hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oaa_G ATP synthase gamma chai 100.0 2.8E-85 9.7E-90 643.9 35.8 286 51-372 1-286 (286)
2 2xok_G ATP synthase subunit ga 100.0 2.2E-81 7.6E-86 621.6 26.6 278 48-372 31-310 (311)
3 3oee_G ATP synthase subunit ga 100.0 7.1E-81 2.4E-85 610.4 29.8 272 51-373 1-278 (278)
4 2ck3_G ATP synthase subunit ga 100.0 9.7E-81 3.3E-85 607.6 14.6 270 51-372 1-272 (272)
5 2qe7_G ATP synthase subunit ga 100.0 8.6E-84 2.9E-88 633.5 -9.7 286 50-373 1-286 (286)
6 1fs0_G ATP synthase gamma subu 100.0 2.1E-60 7.1E-65 454.0 25.5 230 68-333 1-230 (230)
7 1qw2_A Conserved hypothetical 44.2 15 0.0005 30.2 2.9 41 129-180 32-74 (102)
8 3mtu_A Tropomyosin alpha-1 cha 43.5 37 0.0013 26.1 5.0 33 326-358 8-44 (75)
9 2pk8_A Uncharacterized protein 39.9 30 0.001 28.1 4.1 36 144-179 16-51 (103)
10 2jo8_A Serine/threonine-protei 33.8 70 0.0024 23.0 4.7 32 323-357 13-44 (51)
11 2xus_A Breast cancer metastasi 29.3 1.3E+02 0.0045 21.3 5.6 42 327-369 7-48 (49)
12 2oqq_A Transcription factor HY 26.0 1.6E+02 0.0056 20.2 5.9 37 320-356 3-39 (42)
13 3fs3_A Nucleosome assembly pro 22.6 1.3E+02 0.0045 29.8 6.2 80 311-397 37-123 (359)
No 1
>3oaa_G ATP synthase gamma chain; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1}
Probab=100.00 E-value=2.8e-85 Score=643.92 Aligned_cols=286 Identities=35% Similarity=0.555 Sum_probs=259.7
Q ss_pred ccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCccCCCCceEEEE
Q 014925 51 CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIV 130 (416)
Q Consensus 51 a~LkeIk~RI~SVknt~KITkAMkmVAaaKlrkaq~~l~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~lI 130 (416)
|+|+|||+||+||+||+|||+||||||+||+||||+++.+.|||++++.+++.++..... +.+||++..++.+++++|
T Consensus 1 a~lkeIk~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~i~~~l~~l~~~~~--~~~~~~~~~~~~~~~~~I 78 (286)
T 3oaa_G 1 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNL--EYKHPYLEDRDVKRVGYL 78 (286)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHT--TTCCSSCSCCCCSEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHhhCc--cccCcccccCCCCcEEEE
Confidence 589999999999999999999999999999999999999999999999999999987532 346899888888999999
Q ss_pred EEeCCCCCCccccHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhhccccceeeeeecCCCCCHHHHHHHHHHHHhh
Q 014925 131 IITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSL 210 (416)
Q Consensus 131 VItSDrGLCG~fNs~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~~~~~~v~~~~~~~~~p~~~~a~~I~~~li~~ 210 (416)
|||||||||||||+||+|.+.+.++++...|.++.+++||+||.+||++++...+..+.+.++.|++.++..|++.+++.
T Consensus 79 vitSDrGLcG~fN~ni~k~~~~~i~~~~~~~~~~~l~~vG~Kg~~~~~~~~~~i~~~~~~~~~~p~~~~~~~i~~~~~~~ 158 (286)
T 3oaa_G 79 VVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQA 158 (286)
T ss_dssp EECCSCCCSTTHHHHHHHHHHHHHHHHHTTTCEEEEEEESHHHHHHHHHHCCCEEEEECCCTTCCCHHHHHHHHHHHHHH
T ss_pred EEeCCcccccchhHHHHHHHHHHHHHHHhCCCceEEEEeeHHHHHHHHHcCCCeEEeeccccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777777899999999999999988766566665777889999999999999999
Q ss_pred hhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCCCC
Q 014925 211 FVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPL 290 (416)
Q Consensus 211 ~~~~e~d~V~vvYnkf~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (416)
|.+|++|+|+|+||+|+|+++|+|+.++|||+++.+ .++ . ...+.+
T Consensus 159 ~~~g~~d~v~lvyn~f~s~~~q~~~~~~lLPl~~~~-------------~~~---~------------------~~~~~~ 204 (286)
T 3oaa_G 159 YDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASD-------------DDD---L------------------KHKSWD 204 (286)
T ss_dssp HHTTSCSEEEEEEEEEEETTEEEEEEEECSSCCCCH-------------HHH---S------------------CCCSCC
T ss_pred HhcCCCCEEEEEEcccccccccceeEEEecCCCccc-------------ccc---c------------------ccCCCC
Confidence 999999999999999999999999999999998621 000 0 001235
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhHH
Q 014925 291 MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAE 370 (416)
Q Consensus 291 ~~fEp~~e~iL~~Llp~Yl~~~Ly~allES~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~EI~EIVsGAe 370 (416)
|+|||+++++|+.|+|.||+++||+|++||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+||+
T Consensus 205 ~~~Ep~~~~vl~~Llp~yl~~~iy~alles~aSE~aARm~AM~~At~NA~eli~~Ltl~yNr~RQa~IT~El~EIv~Ga~ 284 (286)
T 3oaa_G 205 YLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAA 284 (286)
T ss_dssp CEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q 014925 371 AL 372 (416)
Q Consensus 371 AL 372 (416)
||
T Consensus 285 Al 286 (286)
T 3oaa_G 285 AV 286 (286)
T ss_dssp --
T ss_pred hC
Confidence 86
No 2
>2xok_G ATP synthase subunit gamma, mitochondrial; hydrolase, ATP-binding, F(O), F(1), mitochondr inner membrane, transmembrane; HET: ANP; 3.01A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-81 Score=621.56 Aligned_cols=278 Identities=27% Similarity=0.387 Sum_probs=238.7
Q ss_pred cccccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCccCCCCceE
Q 014925 48 PIRCGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKV 127 (416)
Q Consensus 48 ~~~a~LkeIk~RI~SVknt~KITkAMkmVAaaKlrkaq~~l~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~ 127 (416)
..|++|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++++++.++..... +...||+ +++++
T Consensus 31 ~~MaslkeIk~RI~Svk~t~KITkAMkmVAasKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~-~~~~~p~----~~k~~ 105 (311)
T 2xok_G 31 RTYATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNL-DVEATET----GAPKE 105 (311)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTHHHHHHHHHHHTTCCC----------------CE
T ss_pred cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcc-ccccCCc----ccCce
Confidence 335999999999999999999999999999999999999999999999999999999865321 1124566 25778
Q ss_pred EEEEEeCCCCCCccccHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhhc-cccceeeeeecCC-CCCHHHHHHHHH
Q 014925 128 AIVIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHR-SNVSVIRCIEGEG-FYTVKEAQTIAD 205 (416)
Q Consensus 128 ~lIVItSDrGLCG~fNs~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~~-~~~~v~~~~~~~~-~p~~~~a~~I~~ 205 (416)
++||||||||||||||+||+|.+.+.+++ .+|++ +++||+||.+||+++ +...+..+.+.++ .|+++++..|++
T Consensus 106 ~~IvitSDrGLCG~fNsni~k~~~~~i~~--~~g~~--l~~VG~Kg~~~~~~~~~~~i~~~~~~~~~~~p~~~~a~~i~~ 181 (311)
T 2xok_G 106 LIVAITSDKGLCGSIHSQLAKAVRRHLND--QPNAD--IVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIAD 181 (311)
T ss_dssp EEEEECCSCCSSTTHHHHHHHHHHHSSSS--CTTCE--EEEESHHHHHHHHTTSTTTEEEEEESCTTSCCCHHHHHHHHH
T ss_pred EEEEEeCCCcccchhhHHHHHHHHHHHHh--cCCCE--EEEechHHHHHHHHhcCCCeEEEecccCCCCCCHHHHHHHHH
Confidence 99999999999999999999999887754 34544 999999999999985 6555555556666 899999999999
Q ss_pred HHHhhhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccC
Q 014925 206 NVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKG 285 (416)
Q Consensus 206 ~li~~~~~~e~d~V~vvYnkf~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 285 (416)
.+++.|.+|++|+|+|+||+|+|+++|+|++++|||++.. ++. +
T Consensus 182 ~i~~~~~~g~~d~v~lvYn~f~s~~~q~p~~~~lLPl~~~--------------~~~--------------------~-- 225 (311)
T 2xok_G 182 KLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTI--------------EQS--------------------P-- 225 (311)
T ss_dssp HHHHTTCCTTCSEEEEEEEECSSSSCCEEEEEEECCHHHH--------------HHS--------------------G--
T ss_pred HHHHHHhcCCcceEEEEeeccccceeeeEEEEEccCCccc--------------ccc--------------------c--
Confidence 9999999999999999999999999999999999998530 000 0
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 014925 286 ELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEI 365 (416)
Q Consensus 286 ~~~~~~~fEp~~e~iL~~Llp~Yl~~~Ly~allES~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~EI~EI 365 (416)
. .++|+||| ++++|+.|+|.||+++||+|++||.||||+|||+||++|||||+|||++|+++|||+||++||+||+||
T Consensus 226 ~-~~~y~~EP-~e~vL~~Llp~yl~~~iy~allEs~ASE~aARm~AM~~AtdNA~eli~~Ltl~yNraRQa~IT~EL~EI 303 (311)
T 2xok_G 226 S-FGKFEIDT-DANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDI 303 (311)
T ss_dssp G-GGGSCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCceeCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 0 01478999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHH
Q 014925 366 VAGAEAL 372 (416)
Q Consensus 366 VsGAeAL 372 (416)
|+||+||
T Consensus 304 VsGa~Al 310 (311)
T 2xok_G 304 ITGASSL 310 (311)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9999998
No 3
>3oee_G ATP synthase subunit gamma; ATP phosphatase, F1F0 ATPase, ATP synthesis, H ADP, PO4, mitochondria; HET: ANP; 2.74A {Saccharomyces cerevisiae} SCOP: c.49.2.0 PDB: 2wpd_G* 3fks_G 2hld_G* 3oeh_G* 3ofn_G* 3zry_G* 4b2q_G* 3oe7_G*
Probab=100.00 E-value=7.1e-81 Score=610.35 Aligned_cols=272 Identities=27% Similarity=0.405 Sum_probs=238.0
Q ss_pred ccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCccCC----CCce
Q 014925 51 CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIR----PVKK 126 (416)
Q Consensus 51 a~LkeIk~RI~SVknt~KITkAMkmVAaaKlrkaq~~l~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~----~~k~ 126 (416)
|+|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++.+++.+.. .+|+ ..+ ++++
T Consensus 1 a~lkeIk~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~~~~~~~~~~--------~~~l-~~~~~~~~~~~ 71 (278)
T 3oee_G 1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAE--------TKNL-DVEATETGAPK 71 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CCCC-----------C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhc--------cccc-ccccccccCCc
Confidence 58999999999999999999999999999999999999999999999999988731 1354 333 2688
Q ss_pred EEEEEEeCCCCCCccccHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhhcccc-ceeeeeec-CCCCCHHHHHHHH
Q 014925 127 VAIVIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNV-SVIRCIEG-EGFYTVKEAQTIA 204 (416)
Q Consensus 127 ~~lIVItSDrGLCG~fNs~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~~~~~-~v~~~~~~-~~~p~~~~a~~I~ 204 (416)
+++||||||||||||||+||+|.+.+.+++. + ++.+++||+||.++|++++.. .+..+.++ .+.|+|+++..|+
T Consensus 72 ~~~IvitSDrGLcG~fN~ni~k~~~~~~~~~---~-~~~l~~vG~Kg~~~~~~~~~~~i~~~~~~~~~~~p~~~~a~~i~ 147 (278)
T 3oee_G 72 ELIVAITSDKGLCGSIHSQLAKAVRRHLNDQ---P-NADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIA 147 (278)
T ss_dssp EEEEEECCSCCCSTTHHHHHHHHHHHHTTSC---T-TCEEEEESHHHHHHHHHHCTTTEEEEECSCSSSCCCHHHHHHHH
T ss_pred EEEEEEeCCccccchhhHHHHHHHHHHHHhc---C-CeEEEEEehHHHHHHHHcCCCceEEeeccCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999887643 2 578999999999999876433 44455555 4799999999999
Q ss_pred HHHHhhhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhcccccccc
Q 014925 205 DNVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNK 284 (416)
Q Consensus 205 ~~li~~~~~~e~d~V~vvYnkf~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 284 (416)
+.+++.|.+|++|+|+|+||+|+|+++|+|+.++|||+++.+ .
T Consensus 148 ~~i~~~~~~g~~d~v~ivyn~f~s~~~q~~~~~~llP~~~~~---------------~---------------------- 190 (278)
T 3oee_G 148 DKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIE---------------Q---------------------- 190 (278)
T ss_dssp HHHHHTTCGGGCSEEEEEEEEECSSSCEEEEEEEECCHHHHH---------------S----------------------
T ss_pred HHHHHHHhcCCCcEEEEEecccccceeeeeEEEecCCCCccc---------------c----------------------
Confidence 999999999999999999999999999999999999986410 0
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 014925 285 GELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLE 364 (416)
Q Consensus 285 ~~~~~~~~fEp~~e~iL~~Llp~Yl~~~Ly~allES~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~EI~E 364 (416)
....+.|+|||+ +++|+.|+|.||+++||+|++||+||||+|||+||++|||||+|||++|+++|||+||++||+||+|
T Consensus 191 ~~~~~~y~~eP~-~~vl~~Llp~yl~~~iy~alles~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~El~E 269 (278)
T 3oee_G 191 SPSFGKFEIDTD-ANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVD 269 (278)
T ss_dssp CTTSTTSCCCSS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCceecCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 001236889999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHh
Q 014925 365 IVAGAEALT 373 (416)
Q Consensus 365 IVsGAeAL~ 373 (416)
||+||+||+
T Consensus 270 Iv~Ga~Al~ 278 (278)
T 3oee_G 270 IITGASSLG 278 (278)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHhcC
Confidence 999999984
No 4
>2ck3_G ATP synthase subunit gamma\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: c.49.2.1 PDB: 1cow_G* 1bmf_G* 1e1q_G* 1e1r_G* 1efr_G* 1e79_G* 1h8h_G* 1nbm_G* 1ohh_G* 1qo1_G 1w0j_G* 1w0k_G* 1h8e_G* 2jiz_G* 2jj1_G* 2jj2_G* 2v7q_G* 2wss_G* 2xnd_G* 2w6j_G ...
Probab=100.00 E-value=9.7e-81 Score=607.58 Aligned_cols=270 Identities=29% Similarity=0.448 Sum_probs=175.3
Q ss_pred ccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCccCCCCceEEEE
Q 014925 51 CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIV 130 (416)
Q Consensus 51 a~LkeIk~RI~SVknt~KITkAMkmVAaaKlrkaq~~l~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~lI 130 (416)
++|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++.+++.++- ..|| ++++++++|
T Consensus 1 a~lkeIk~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~~~~~~~~~~-------~~~~----~~~k~~~~i 69 (272)
T 2ck3_G 1 ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKAD-------IKTP----EDKKKHLII 69 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------------CCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHhcc-------ccCc----cccCceEEE
Confidence 47999999999999999999999999999999999999999999999999988761 1234 345678999
Q ss_pred EEeCCCCCCccccHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhh-ccccceeeeeecCC-CCCHHHHHHHHHHHH
Q 014925 131 IITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRH-RSNVSVIRCIEGEG-FYTVKEAQTIADNVF 208 (416)
Q Consensus 131 VItSDrGLCG~fNs~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~-~~~~~v~~~~~~~~-~p~~~~a~~I~~~li 208 (416)
|||||||||||||+||+|.+.+.++++..+|+++.+++||+||.+||++ ++...+..+.++++ .|+++++..|+++++
T Consensus 70 vitSDrGLcG~~Nsni~k~~~~~~~~~~~~g~~~~l~~vG~K~~~~~~~~~~~~i~~~~~~~~~~~p~~~~a~~i~~~~~ 149 (272)
T 2ck3_G 70 GVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELL 149 (272)
T ss_dssp CBCCSCCCSSSSHHHHC------------------CCCBSHHHHHHC----------CBCSCSSSCCCHHHHHHHHHHC-
T ss_pred EEeCCccccccccHHHHHHHHHHHHHhhccCCceEEEEecHHHHHHHHhccCCceeeeecccCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999988777777788999999999999995 55444445556677 599999999999999
Q ss_pred hhhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCC
Q 014925 209 SLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELS 288 (416)
Q Consensus 209 ~~~~~~e~d~V~vvYnkf~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 288 (416)
+ ..+++|+|+|+||+|+|+++|+|++.+|||+++.+ .. +
T Consensus 150 ~--~~~~~d~v~ivyn~f~s~~~q~p~~~~lLPl~~~~--------------~~-------------------------~ 188 (272)
T 2ck3_G 150 N--SGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS--------------SA-------------------------E 188 (272)
T ss_dssp -----------CCCCCEECSSSCEECC-----------------------------------------------------
T ss_pred H--ccCCCceEEEEeeccccccceeeeeeeccCCCccc--------------cc-------------------------c
Confidence 8 35799999999999999999999999999996411 00 0
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 014925 289 PLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAG 368 (416)
Q Consensus 289 ~~~~fEp~~e~iL~~Llp~Yl~~~Ly~allES~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~EI~EIVsG 368 (416)
.+|+|||+++++|+.|+|.|++++||+|++||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+|
T Consensus 189 ~~~~~Ep~~~~vl~~llp~y~~~~iy~alles~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~El~EIv~G 268 (272)
T 2ck3_G 189 SMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISG 268 (272)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 14689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 014925 369 AEAL 372 (416)
Q Consensus 369 AeAL 372 (416)
|+||
T Consensus 269 a~Al 272 (272)
T 2ck3_G 269 AAAL 272 (272)
T ss_dssp HC--
T ss_pred HhhC
Confidence 9986
No 5
>2qe7_G ATP synthase subunit gamma; blockage of ATP hydrolysis, F1-ATPase, single analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP}
Probab=100.00 E-value=8.6e-84 Score=633.50 Aligned_cols=286 Identities=37% Similarity=0.595 Sum_probs=213.1
Q ss_pred cccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCccCCCCceEEE
Q 014925 50 RCGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAI 129 (416)
Q Consensus 50 ~a~LkeIk~RI~SVknt~KITkAMkmVAaaKlrkaq~~l~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~l 129 (416)
|++|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++++++.++..... +..||++..+++++++|
T Consensus 1 Ma~lkeik~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~~~~~l~~l~~~~~--~~~~~~~~~~~~k~~~~ 78 (286)
T 2qe7_G 1 MQGMREIKRRIRSVKNTRQITKAMKMVAAAKLRRAQETAENARPYADKIKEVISSIAAGTK--DFSHPMLEARPVKKTGY 78 (286)
T ss_dssp --CCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTSTTTSSSSSSSSTTCC----------------CCSSCSCCCCSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc--cccCccccccccCcEEE
Confidence 5899999999999999999999999999999999999999999999999999999976431 34678887777788899
Q ss_pred EEEeCCCCCCccccHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhhccccceeeeeecCCCCCHHHHHHHHHHHHh
Q 014925 130 VIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFS 209 (416)
Q Consensus 130 IVItSDrGLCG~fNs~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~~~~~~v~~~~~~~~~p~~~~a~~I~~~li~ 209 (416)
||||||||||||||++|+|.+.+.++++..+|+++.+++||+||.+||++++...+..+.+.++.|+++++..|++.+++
T Consensus 79 IvitsDrGLcG~~N~ni~k~~~~~i~~~~~~~~~~~~~~iG~Kg~~~~~~~~~~i~~~~~~~~~~p~~~~a~~i~~~i~~ 158 (286)
T 2qe7_G 79 MVITSDRGLAGPYNANILRLVSKTIEERHQSKDEYVIFAVGRKGRDFFKKRGYPVVEEVTGISDTPSLTEIQDIAQSAIG 158 (286)
T ss_dssp CCCCCTTCCCTHHHHHHHTGGGTTTTSSCTTSSCCCCCCCSHHHHHHHHSSSSCCSCCCSCCCSSCCSTTTHHHHHHHHH
T ss_pred EEEeCCCCcccchhHHHHHHHHHHHHHhhccCCceEEEEechHHHHHHHHcCCCceeeeccCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998887666667788899999999999998875555455466778999999999999999
Q ss_pred hhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCCC
Q 014925 210 LFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSP 289 (416)
Q Consensus 210 ~~~~~e~d~V~vvYnkf~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (416)
.|.+|++|+|+|+||+|+|+++|+|+.++|||++..+ .++ . . .+
T Consensus 159 ~~~~~~~d~v~lvyn~f~s~~~q~~~~~~lLP~~~~~-------------~~~--------------------~--~-~~ 202 (286)
T 2qe7_G 159 MFADETFDKLTIFYNEFVSPIVQRPVEKQLLPLTSEE-------------VLD--------------------G--P-VS 202 (286)
T ss_dssp HHSSSSCSCCCCCCCCCSBTTBCCCCCCCCSSCCC---------------------------------------------
T ss_pred HHhcCCcceEEEEEeecccceeeeeEEEEecCCCccc-------------ccc--------------------c--c-CC
Confidence 9999999999999999999999999999999996411 000 0 0 12
Q ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhH
Q 014925 290 LMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 369 (416)
Q Consensus 290 ~~~fEp~~e~iL~~Llp~Yl~~~Ly~allES~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~EI~EIVsGA 369 (416)
+|+|||+++++|+.|+|.||+++||+|++||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+||
T Consensus 203 ~y~~Ep~~~~vl~~Ll~~yl~~~iy~al~Es~asE~aaRm~AM~~At~Na~eli~~L~l~yNr~RQa~IT~El~EIv~Ga 282 (286)
T 2qe7_G 203 AYEYEPDSESVLEVLLPKYAETLIYSALLDAKASEFGARMTAMGNATDNATEMLETLTLQFNRARQAAITQEIAEIVAGA 282 (286)
T ss_dssp --------------CCCTTSSHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSCC----------------
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 014925 370 EALT 373 (416)
Q Consensus 370 eAL~ 373 (416)
+||+
T Consensus 283 ~Al~ 286 (286)
T 2qe7_G 283 NALR 286 (286)
T ss_dssp ----
T ss_pred HHcC
Confidence 9984
No 6
>1fs0_G ATP synthase gamma subunit; coiled coil, epsilon, hydrolase; 2.10A {Escherichia coli} SCOP: c.49.2.1
Probab=100.00 E-value=2.1e-60 Score=453.97 Aligned_cols=230 Identities=31% Similarity=0.499 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCccCCCCceEEEEEEeCCCCCCccccHHHH
Q 014925 68 KITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIVIITGDRGLCGGFNKAVI 147 (416)
Q Consensus 68 KITkAMkmVAaaKlrkaq~~l~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~lIVItSDrGLCG~fNs~Ii 147 (416)
|||+||||||+||+||||+++.+.|||++++++++.++..... +..||++..++++++++||||||||||||||+||+
T Consensus 1 KITkAMkmVAasKlrkaq~~~~~~rpY~~~~~~~l~~l~~~~~--~~~~p~~~~r~~k~~~~IvitSDrGLcG~~Nsni~ 78 (230)
T 1fs0_G 1 KITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNL--EYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLF 78 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCGGGSCCCCSEEEEEEECCSSSCSTTHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHhcCc--ccCCccccccccCcEEEEEEeCCccccccccHHHH
Confidence 7999999999999999999999999999999999999986432 34688887777789999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcEEEEEEechhHHHHhhccccceeeeeecCCCCCHHHHHHHHHHHHhhhhcCCccEEEEEeeccc
Q 014925 148 KKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSLFVSEEVDKVELVYTKFV 227 (416)
Q Consensus 148 k~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~~~~~~v~~~~~~~~~p~~~~a~~I~~~li~~~~~~e~d~V~vvYnkf~ 227 (416)
|.+.+.++++..+|+++.+++||+||.++|++++...+..+.+.++.|+++++..|++.+++.|.+|++|+|+|+||+|+
T Consensus 79 k~~~~~i~~~~~~g~~~~l~~vG~Kg~~~~~~~~~~i~~~~~~~~~~p~~~~a~~i~~~i~~~~~~g~~d~v~lvYn~f~ 158 (230)
T 1fs0_G 79 KKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFI 158 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESHHHHHHHHHHCCCEEEEECCCTTCCCSHHHHHHHHHHHHHHHTTSCSCEEEEEEEEE
T ss_pred HHHHHHHHHhhcCCCcEEEEEEeHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHHHHhcCCCcEEEEEEeeec
Confidence 99999998887788889999999999999999875555555567788999999999999999999999999999999999
Q ss_pred ccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCCCCccccCCHHHHHHHHHHH
Q 014925 228 SLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPL 307 (416)
Q Consensus 228 s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~fEp~~e~iL~~Llp~ 307 (416)
|+++|+|++++|||++..+ .++ ... ..++|+|||+++++|+.|+|.
T Consensus 159 s~~~q~p~~~~lLP~~~~~-------------~~~------------------~~~---~~~~y~~Ep~~~~vl~~Llp~ 204 (230)
T 1fs0_G 159 NTMSQVPTISQLLPLPASD-------------DDD------------------LKH---KSWDYLYEPDPKALLDTLLRR 204 (230)
T ss_dssp ETTEEEEEEEEEESCC--------------------------------------CC---CSCCCEEESCHHHHHHHHHHH
T ss_pred ccEEeeEEEEEecCCChhh-------------ccc------------------ccc---cCCCeEecCCHHHHHHHHHHH
Confidence 9999999999999996411 000 000 012478999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014925 308 YMNSQILRALQESFASEVAARMSAMS 333 (416)
Q Consensus 308 Yl~~~Ly~allES~aSE~aARm~AM~ 333 (416)
||+++||+|++||.||||+|||+||+
T Consensus 205 yl~~~iy~alles~aSE~aARm~AM~ 230 (230)
T 1fs0_G 205 YVESQVYQGVVENLASEQAARMVAMK 230 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999996
No 7
>1qw2_A Conserved hypothetical protein TA1206; structural genomics, beta/alpha, antiparallel beta sandwich, protein structure initiative; 1.50A {Thermoplasma acidophilum} SCOP: d.249.1.1
Probab=44.22 E-value=15 Score=30.24 Aligned_cols=41 Identities=29% Similarity=0.475 Sum_probs=31.4
Q ss_pred EEEEeCCCCC--CccccHHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhhc
Q 014925 129 IVIITGDRGL--CGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHR 180 (416)
Q Consensus 129 lIVItSDrGL--CG~fNs~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~~ 180 (416)
+++|.+|+|+ ||.+|-....++ + ++...++|-+..+-+-+.
T Consensus 32 Ll~i~~~kG~imCGalDv~~~ekl----------~-~~Aarv~GV~t~edlL~a 74 (102)
T 1qw2_A 32 LLFIKGSKGYAMCGYLNMETSNKV----------G-DIAVRVMGVKTLDDMLSA 74 (102)
T ss_dssp EEEEECSSCEEECTTCCHHHHHHT----------T-CCEEECCSCCSHHHHHHS
T ss_pred EEEEEeCceEEEecccChhHHHhh----------c-cceEEEEccCCHHHHhhC
Confidence 7899999996 999998884432 1 356677899999877653
No 8
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=43.54 E-value=37 Score=26.08 Aligned_cols=33 Identities=12% Similarity=0.241 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHH----HHHHhHHHHH
Q 014925 326 AARMSAMSTATDNADELKKNLSV----AYNQERQAKI 358 (416)
Q Consensus 326 aARm~AM~~AtdNA~eli~~Ltl----~yNr~RQa~I 358 (416)
.-.|.+|+.=.+|+.+.++.|.. -|+|+|+..|
T Consensus 8 KkkmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~ 44 (75)
T 3mtu_A 8 KKKMQMLKLDKENALDRAEQAEADKDFYFGKLRNIEL 44 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45788999999999999999987 6889999765
No 9
>2pk8_A Uncharacterized protein PF0899; structural genomics, uncharacte protein, PSI, protein structure initiative; 1.85A {Pyrococcus furiosus dsm 3638} SCOP: d.274.1.1
Probab=39.92 E-value=30 Score=28.07 Aligned_cols=36 Identities=22% Similarity=0.408 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEEechhHHHHhh
Q 014925 144 KAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRH 179 (416)
Q Consensus 144 s~Iik~~~~~i~~~~~~g~~~~li~VGkKg~~~~~~ 179 (416)
.+|+..+++.+++++..|-++.++.+|+-.+.|++.
T Consensus 16 irIl~~ieekinELk~dG~ePDIiL~G~eayef~~e 51 (103)
T 2pk8_A 16 IRILGEIEEKMNELKMDGFNPDIILFGREAYNFLSN 51 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEcHHHHHHHHH
Confidence 467788888899999999999999999999999985
No 10
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=33.75 E-value=70 Score=22.97 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHH
Q 014925 323 SEVAARMSAMSTATDNADELKKNLSVAYNQERQAK 357 (416)
Q Consensus 323 SE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~ 357 (416)
-|...|+.+.+.+- +.=|.+|...|.+.||--
T Consensus 13 eEL~~rl~~Ld~~M---e~Ei~elr~RY~~KRqPI 44 (51)
T 2jo8_A 13 EDLQKRLLALDPMM---EQEIEEIRQKYQSKRQPI 44 (51)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHH---HHHHHHHHHHHHHhHhhH
Confidence 36667776666654 445899999999999964
No 11
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=29.32 E-value=1.3e+02 Score=21.32 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhH
Q 014925 327 ARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 369 (416)
Q Consensus 327 ARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~EI~EIVsGA 369 (416)
-|+.||+.=+ ++++--..|.-++=+-|-+.|-.||.||-+|-
T Consensus 7 rr~e~ld~l~-~LEkqF~~LkEqlY~ERl~ql~~~Leel~~g~ 48 (49)
T 2xus_A 7 RRSECVSEML-DLEKQFSELKEKLFRERLSQLRLRLEEVGAER 48 (49)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 4666666543 46666777888888999999999999998874
No 12
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=26.01 E-value=1.6e+02 Score=20.18 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHH
Q 014925 320 SFASEVAARMSAMSTATDNADELKKNLSVAYNQERQA 356 (416)
Q Consensus 320 S~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa 356 (416)
++.+|..+|..-|+.-..-.++.+..|+.+-...||-
T Consensus 3 aYl~eLE~r~k~le~~naeLEervstLq~EN~mLRqv 39 (42)
T 2oqq_A 3 AYLSELENRVKDLENKNSELEERLSTLQNENQMLRHI 39 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3567788888888887778889999999999999984
No 13
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=22.59 E-value=1.3e+02 Score=29.82 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHhHHHHHHHHHHHHHhhHHHHhccccCCCccc
Q 014925 311 SQILRALQESFASEVAARMSAMSTATDNADE-------LKKNLSVAYNQERQAKITGELLEIVAGAEALTQIRLRVPSFH 383 (416)
Q Consensus 311 ~~Ly~allES~aSE~aARm~AM~~AtdNA~e-------li~~Ltl~yNr~RQa~IT~EI~EIVsGAeAL~~~~~~~~~~~ 383 (416)
..||.-+++++..+...|..|++.-..-..+ -+-+|..+|++.+|- +=+.=-+||.|...-.. ..-
T Consensus 37 ~~~~~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~qP-LyeKR~eII~G~~e~e~------~~k 109 (359)
T 3fs3_A 37 FYLYDDKMTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGP-IYDKRREALVGNGEAKI------GTP 109 (359)
T ss_dssp --------CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHC---CCS------SST
T ss_pred ccchhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHcCcccccc------ccC
Confidence 4456666777777777777777655443333 455688999999985 66777889988643211 123
Q ss_pred ccchHHHHHHHhhc
Q 014925 384 GHVSFLHIIWLNHC 397 (416)
Q Consensus 384 ~~~~~~~~~~~~~~ 397 (416)
|.-+|+..++.||-
T Consensus 110 gIP~FWltvl~Nhp 123 (359)
T 3fs3_A 110 NLPEFWLRALRNNN 123 (359)
T ss_dssp TSTTHHHHHHHTSH
T ss_pred CCCcHHHHHHHhch
Confidence 56667666677763
Done!