BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014927
(416 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 220/405 (54%), Gaps = 34/405 (8%)
Query: 12 WPELLGSNNWNGXXXXXXXXXXXXXXXCGDFIQATYDAFNNDQNSKYCGTSRYGKRAFFD 71
W +L G N+W G G+ QA YD FN + S++ G S Y ++ FF
Sbjct: 23 WRDLSGQNHWKGXLQPLDQDLREYIIHYGEXAQAGYDTFNINTESQFAGASIYSRKDFFA 82
Query: 72 KVMLQNA---PDYQVFSFLYGTARVSLPEAFLVHSLSRESWDRESNWIGYIAVTSDERLK 128
KV L+ A Y+V F+Y T+ + +PE+FL+ +SRE W +ESNW GY+AVT D+
Sbjct: 83 KVGLEIAHPYTKYKVTKFIYATSDIHVPESFLLFPISREGWSKESNWXGYVAVTDDQGTA 142
Query: 129 AIGRREIYVAWRGTTRNYEWVNVLGAQQASVGSILNKSKFRVEEKNXXXXXXXXXXXETV 188
+GRR+I V+WRG+ + EWV + I + +V+
Sbjct: 143 LLGRRDIVVSWRGSVQPLEWVEDFEFGLVNAIKIFGERNDQVQ----------------- 185
Query: 189 PKVMQGWLTIYTSEDPNSSFTKLSARAQLVSKIQELRERYQGEELSVIFTGHSLGASLSI 248
+ QGW +IY S+D S FTK +AR Q++ ++ L E+Y+ EE+S+ GHSLGA+L+
Sbjct: 186 --IHQGWYSIYXSQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAALAT 243
Query: 249 LSAFDLAENGVT--------DIPVAAFVFGCPQVGNKAFNERLKSYTNVKVLHVRNTIDL 300
LSA D+ NG PV AFVF P+VG+ F + +++VL RN D+
Sbjct: 244 LSATDIVANGYNRPKSRPDKSCPVTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDV 303
Query: 301 ITHYPGRLLGYVNTGTELVIDTRKSPSLKESVNPSDWHNLQAMLHVVAGWNGDDGE--FE 358
I YP +GY G E IDTRKSP K N + +H L+ LH VAG G + F
Sbjct: 304 IPIYPP--IGYSEVGDEFPIDTRKSPYXKSPGNLATFHCLEGYLHGVAGTQGTNKADLFR 361
Query: 359 LKVKRSLALVNKSCEFLKDELLVPGSWCVEKNKGMVRDEDGEWVL 403
L V+R++ LVNKS + LKDE VPG W V KNKG + +DG W L
Sbjct: 362 LDVERAIGLVNKSVDGLKDECXVPGKWRVLKNKGXAQQDDGSWEL 406
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 232 ELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFGCPQVGNKAFNERLKSYTNVKV 291
+ V+FTGHSLG +L+ ++ DL NG DI V F +G P+VGN+AF E L T +
Sbjct: 137 DYRVVFTGHSLGGALATVAGADLRGNGY-DIDV--FSYGAPRVGNRAFAEFLTVQTGGTL 193
Query: 292 LHVRNTIDLITHYPGRLLGYVNTGTE 317
+ +T D++ P R GY ++ E
Sbjct: 194 YRITHTNDIVPRLPPREFGYSHSSPE 219
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 232 ELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFGCPQVGNKAFNERLKSYTNVKV 291
+ V+FTGH+LG +L+ ++ DL NG DI V F +G P+VGN+AF E L T +
Sbjct: 137 DYRVVFTGHALGGALATVAGADLRGNGY-DIDV--FSYGAPRVGNRAFAEFLTVQTGGTL 193
Query: 292 LHVRNTIDLITHYPGRLLGYVNTGTE 317
+ +T D++ P R GY ++ E
Sbjct: 194 YRITHTNDIVPRLPPREFGYSHSSPE 219
>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
Structure Of A Fungal Lipase-Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 216 QLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDL--AENGVTDIPVAAFVFGCPQ 273
+LV+ + + ++Y +++V TGHSLG + ++L A DL E G++ + + G P+
Sbjct: 121 ELVATVLDQFKQYPSYKVAV--TGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQPR 178
Query: 274 VGNKAFNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSP 326
VGN AF + S T + N D++ H P G+++ G+E I T SP
Sbjct: 179 VGNPAFANYVVS-TGIPYRRTVNERDIVPHLPPAAFGFLHAGSEYWI-TDNSP 229
>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
Conformational Change In A Triglyceride Lipase
Length = 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 216 QLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDL--AENGVTDIPVAAFVFGCPQ 273
+LV+ + + ++Y +++V TGHSLG + ++L A DL E G++ + + G P+
Sbjct: 121 ELVATVLDQFKQYPSYKVAV--TGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQPR 178
Query: 274 VGNKAFNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSP 326
VGN AF + S T + N D++ H P G+++ G+E I T SP
Sbjct: 179 VGNPAFANYVVS-TGIPYRRTVNERDIVPHLPPAAFGFLHAGSEYWI-TDNSP 229
>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
Triacylglycerol Lipase
Length = 269
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 216 QLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDL--AENGVTDIPVAAFVFGCPQ 273
+LV+ + + ++Y +++V TGHSLG + ++L A DL E G++ + + G P+
Sbjct: 121 ELVATVLDQFKQYPSYKVAV--TGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQPR 178
Query: 274 VGNKAFNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSP 326
VGN AF + S T + N D++ H P G+++ G+E I T SP
Sbjct: 179 VGNPAFANYVVS-TGIPYRRTVNERDIVPHLPPAAFGFLHAGSEYWI-TDNSP 229
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 216 QLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDL--AENGVTDIPVAAFVFGCPQ 273
+LV+ + + ++Y +++V TGHSLG + +L A DL E G++ + + G P+
Sbjct: 121 ELVATVLDQFKQYPSYKVAV--TGHSLGGATVLLCALDLYQREEGLSSSNLFLYTQGQPR 178
Query: 274 VGNKAFNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSP 326
VG+ AF + S T + N D++ H P G+++ G E I T SP
Sbjct: 179 VGDPAFANYVVS-TGIPYRRTVNERDIVPHLPPAAFGFLHAGEEYWI-TDNSP 229
>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 235 VIFTGHSLGASLSILSAFDLAENGVTDIP--VAAFVFGCPQVGNKAFNERLKSYTNVKVL 292
VI TGHSLG + ++L+ DL + P ++ F G P+VGN F ++S T +
Sbjct: 139 VIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGPRVGNPTFAYYVES-TGIPFQ 197
Query: 293 HVRNTIDLITHYPGRLLGYVNTGTE 317
+ D++ H P + G+++ G E
Sbjct: 198 RTVHKRDIVPHVPPQSFGFLHPGVE 222
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 211 LSARAQLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFG 270
+S + Q+ S +++ +Y L+V TGHSLGAS++ L+A L+ T V + FG
Sbjct: 105 ISVQDQVESLVKQQASQYPDYALTV--TGHSLGASMAALTAAQLS---ATYDNVRLYTFG 159
Query: 271 CPQVGNKAFNE------RLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTE 317
P+ GN+AF ++ S + V ++ D I + P GY + G E
Sbjct: 160 EPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVE 212
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 211 LSARAQLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFG 270
+S + Q+ S +++ +Y L+V TGHSLGAS++ L+A L+ T V + FG
Sbjct: 105 ISVQDQVESLVKQQASQYPDYALTV--TGHSLGASMAALTAAQLS---ATYDNVRLYTFG 159
Query: 271 CPQVGNKAFNE------RLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTE 317
P+ GN+AF ++ S + V ++ D I + P GY + G E
Sbjct: 160 EPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVE 212
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 211 LSARAQLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFG 270
+S + Q+ S +++ +Y L+V TGHSLGAS++ L+A L+ T V + FG
Sbjct: 105 ISVQDQVESLVKQQASQYPDYALTV--TGHSLGASMAALTAAQLS---ATYDNVRLYTFG 159
Query: 271 CPQVGNKAFNE------RLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTE 317
P+ GN+AF ++ S + V ++ D I + P GY + G E
Sbjct: 160 EPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPADEGYAHGGVE 212
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 211 LSARAQLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFG 270
+S + Q+ S +++ +Y L+V TGH+LGAS++ L+A L+ T V + FG
Sbjct: 105 ISVQDQVESLVKQQASQYPDYALTV--TGHALGASMAALTAAQLS---ATYDNVRLYTFG 159
Query: 271 CPQVGNKAFNE------RLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTE 317
P+ GN+AF ++ S + V ++ D I + P GY + G E
Sbjct: 160 EPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPADEGYAHGGVE 212
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 214 RAQLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFGCPQ 273
R ++ +++E+ + EL V+ GHSLGA+++ L+A DL G + + + P+
Sbjct: 120 RDDIIKELKEVVAQNPNYELVVV--GHSLGAAVATLAATDLRGKGYPSAKL--YAYASPR 175
Query: 274 VGNKAFNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSPSLKES 331
VGN A + + + N +T D + P +GYV+ E I + + ++ S
Sbjct: 176 VGNAALAKYITAQGN--NFRFTHTNDPVPKLPLLSMGYVHVSPEYWITSPNNATVSTS 231
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 235 VIFTGHSLGASLSILSAFDL---AENGVTDIPVAAFVFGCPQVGNKAFNERLKSYTNVKV 291
V GHSLGA++ +L A D+ + G+ ++FG P++GN F + K
Sbjct: 139 VTVIGHSLGAAMGLLCAMDIELRMDGGL----YKTYLFGLPRLGNPTFASFVDQKIGDKF 194
Query: 292 LHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSPSLKESVNPSDWHNLQAMLHVVAGWN 351
+ N D + P R LGY + + I S S K + P N+ +L V +N
Sbjct: 195 HSIINGRDWVPTVPPRALGYQHPSDYVWIYPGNSTSAK--LYPGQ-ENVHGILTVAREFN 251
Query: 352 GDD 354
DD
Sbjct: 252 FDD 254
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 235 VIFTGHSLGASLSILSAFDL---AENGVTDIPVAAFVFGCPQVGNKAFNERLKSYTNVKV 291
V GHSLGA++ +L A D+ + G+ ++FG P++GN F + K
Sbjct: 140 VTVIGHSLGAAMGLLCAMDIELRMDGGL----YKTYLFGLPRLGNPTFASFVDQKIGDKF 195
Query: 292 LHVRNTIDLITHYPGRLLGYVNTGTELVIDTRKSPSLKESVNPSDWHNLQAMLHVVAGWN 351
+ N D + P R LGY + + I S S K + P N+ +L V +N
Sbjct: 196 HSIINGRDWVPTVPPRALGYQHPSDYVWIYPGNSTSAK--LYPGQ-ENVHGILTVAREFN 252
Query: 352 GDD 354
DD
Sbjct: 253 FDD 255
>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
Length = 319
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 232 ELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFGCPQVGNKAFNERLKSYTNVKV 291
V+ GHSLG +++ L+ +L G P+ + +G P+VGN + + +
Sbjct: 135 SFKVVSVGHSLGGAVATLAGANLRIGGT---PLDIYTYGSPRVGNTQLAAFVSNQAGGE- 190
Query: 292 LHVRNTIDLITHYPGRLLGYVNTGTE 317
V N D + P + GY +T E
Sbjct: 191 FRVTNAKDPVPRLPPLIFGYRHTSPE 216
>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
Length = 301
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 216 QLVSKIQELRERYQGEELSVIFTGHSLGASLSILSAFDLAENGVTDIPVAAFVFGCPQVG 275
Q+ K+ + E+Y +++V TGHSLG + ++L +L NG + V G P VG
Sbjct: 139 QIGPKLDSVIEQYPDYQIAV--TGHSLGGAAALLFGINLKVNGHDPLVVT---LGQPIVG 193
Query: 276 NKAF 279
N F
Sbjct: 194 NAGF 197
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 259 VTDIPVAAFVFGCPQVGNKA--FNERLKSYTNVKVLHVRNTIDLITHYPGRLLGYVNTGT 316
V D AA VF PQ + A +E+ +Y N ++H+ ++ PG +G + +
Sbjct: 225 VCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN 284
Query: 317 ELVIDTRKSPSLKESVNPSDWHNLQAMLHVVAGWNGDDGEFELKVKRSLALVNKSCEFLK 376
+ V++ + S V+ + L AML D+ + ++ S + K +
Sbjct: 285 DDVVNCARKMSSFGLVSTQTQYFLAAML-------SDEKFVDNFLRESAMRLGKRHKHFT 337
Query: 377 DELLVPGSWCVEKNKGM 393
+ L V G C++ N G+
Sbjct: 338 NGLEVVGIKCLKNNAGL 354
>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
Length = 346
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 221 IQELRERYQGE-ELSVIFTGHSLGASLSILSAFDLAE-NGVT---DIPVAAFVFGCPQVG 275
+Q L E+ E + + TGHS G +LS A L + GV +I ++ F P G
Sbjct: 153 LQFLNEKIGPEGKAKICVTGHSKGGALSSTLALWLKDIQGVKLSQNIDISTIPFAGPTAG 212
Query: 276 NKAFNERLKSYTNVKVLHVRNTIDLITH 303
N F + + + N++D++ +
Sbjct: 213 NADFADYFDDCLGDQCTRIANSLDIVPY 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,296,174
Number of Sequences: 62578
Number of extensions: 492308
Number of successful extensions: 1099
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1065
Number of HSP's gapped (non-prelim): 27
length of query: 416
length of database: 14,973,337
effective HSP length: 101
effective length of query: 315
effective length of database: 8,652,959
effective search space: 2725682085
effective search space used: 2725682085
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)