BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014931
         (415 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3TNG|A Chain A, The Crystal Structure Of A Possible Phosphate
           AcetylBUTARYL Transferase From Listeria Monocytogenes
           Egd-E.
 pdb|3U9E|A Chain A, The Crystal Structure Of A Possible Phosphate
           AcetylBUTARYL Transferase (From Listeria Monocytogenes
           Egd-E) In Complex With Coa.
 pdb|3U9E|B Chain B, The Crystal Structure Of A Possible Phosphate
           AcetylBUTARYL Transferase (From Listeria Monocytogenes
           Egd-E) In Complex With Coa.
 pdb|3UF6|A Chain A, The Crystal Structure Of A Possible Phosphate
           AcetylBUTARYL Transferase (From Listeria Monocytogenes
           Egd-E) In Complex With Cod (3'-Dephosphocoenzyme A)
 pdb|3UF6|B Chain B, The Crystal Structure Of A Possible Phosphate
           AcetylBUTARYL Transferase (From Listeria Monocytogenes
           Egd-E) In Complex With Cod (3'-Dephosphocoenzyme A)
          Length = 291

 Score = 30.0 bits (66), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 143 SLNRGQWVSMVCLVDSLIPPKLKSMH--YKQNGSLIIFKATEYNATIEFYWTPLLVESNS 200
           +L++G   S     D LI P +++ +  YK   SL+ F   +  + +     P+++ S +
Sbjct: 216 ALHKGITDSSAGEADILIAPNIETGNALYK---SLVYFAGAKVGSAVVGAKVPIVISSRN 272

Query: 201 DDPVNHRLPDRIVRVQAIEK 220
           D P N +L   I+ V+ +EK
Sbjct: 273 DSPEN-KLASFILTVRLVEK 291


>pdb|3G5C|A Chain A, Structural And Biochemical Studies On The Ectodomain Of
           Human Adam22
 pdb|3G5C|B Chain B, Structural And Biochemical Studies On The Ectodomain Of
           Human Adam22
          Length = 510

 Score = 28.5 bits (62), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 9/74 (12%)

Query: 218 IEKHARYWTDADILVFNSYLWWKRSQMEVLWGS------FGSPDGIHKDVLMPRVYEMAL 271
           +E+  +Y    ++++ N +L +K+ ++ V+  +          D I+KD L  R+  +A+
Sbjct: 2   VEEETKYI---ELMIVNDHLMFKKHRLSVVHTNTYAKSVVNMADLIYKDQLKTRIVLVAM 58

Query: 272 RTWSEWLEVNINRN 285
            TW+   +  I+ N
Sbjct: 59  ETWATDNKFAISEN 72


>pdb|2P9W|A Chain A, Crystal Structure Of The Major Malassezia Sympodialis
           Allergen Mala S 1
          Length = 334

 Score = 28.1 bits (61), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 15/70 (21%)

Query: 249 GSFGSPDGIHKDVLMP-----------RVYEMALRTWSEWLEVNINRNKTQLF----FVS 293
           G FG+  G  K V +P             Y ++ R+W  W   NI + K        F +
Sbjct: 227 GDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTKRSELQNSGFTA 286

Query: 294 MSPTHQRSEE 303
           ++  +Q SE+
Sbjct: 287 VADYYQGSEQ 296


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.135    0.438 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,599,663
Number of Sequences: 62578
Number of extensions: 518162
Number of successful extensions: 947
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 947
Number of HSP's gapped (non-prelim): 6
length of query: 415
length of database: 14,973,337
effective HSP length: 101
effective length of query: 314
effective length of database: 8,652,959
effective search space: 2717029126
effective search space used: 2717029126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)