BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014931
         (415 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q1LW89|CASD1_DANRE CAS1 domain-containing protein 1 OS=Danio rerio GN=casd1 PE=2 SV=2
          Length = 781

 Score = 38.9 bits (89), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 113 WQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQN 172
           WQP+ C L ++  T+    LR KR+ FVGDS  R  + S + +++    P++K +  K  
Sbjct: 64  WQPYGCMLHKYKSTEAKFCLREKRIAFVGDSRIRQLFYSFIKMMN----PEVKEVGNKHE 119

Query: 173 GSLIIFKATEYNATIEFYW 191
               +    + ++T+ F W
Sbjct: 120 NIPFV----DGDSTVNFLW 134


>sp|Q96PB1|CASD1_HUMAN CAS1 domain-containing protein 1 OS=Homo sapiens GN=CASD1 PE=2 SV=1
          Length = 797

 Score = 38.1 bits (87), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 113 WQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQN 172
           WQPH C + ++  ++    L +K + F+GDS  R  + S V     +I P+ K    K  
Sbjct: 64  WQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIRQLFYSFV----KIINPQFKEEGNKHE 119

Query: 173 GSLIIFKATEYNATIEFYWTPLLVESNSDDPVNHRLPDRIVRVQAIEKHARYWT 226
              I F+    +  ++F W P  V  +    +     D I +   I   A  W+
Sbjct: 120 N--IPFEDKTASVKVDFLWHP-EVNGSMKQCIKVWTEDSIAKPHVIVAGAATWS 170


>sp|A4D0V7|CPED1_HUMAN Cadherin-like and PC-esterase domain-containing protein 1 OS=Homo
           sapiens GN=CPED1 PE=2 SV=1
          Length = 1026

 Score = 38.1 bits (87), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 14/62 (22%)

Query: 89  CTFMSDQLACEKFGRKDLNYQFWR---WQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLN 145
           C   SD   C+           WR   WQPH+C        +L + L  ++++F+GDS N
Sbjct: 731 CLSCSDNRTCD-----------WREITWQPHNCQYGVLTKPQLQQCLGGRKILFIGDSTN 779

Query: 146 RG 147
           RG
Sbjct: 780 RG 781


>sp|Q7TN73|CASD1_MOUSE CAS1 domain-containing protein 1 OS=Mus musculus GN=Casd1 PE=2 SV=1
          Length = 797

 Score = 37.7 bits (86), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 113 WQPHHCDLPRFNGTKLLEKLRNKRLVFVGDSLNRGQWVSMVCLVDSLIPPKLKSMHYKQN 172
           WQPH C + ++  ++    L +K + F+GDS  R  + S V     +I P+ K    K  
Sbjct: 64  WQPHSCMMHKYKISEAKTCLVDKHIAFIGDSRIRQLFYSFV----KIINPQFKEEGNKHE 119

Query: 173 GSLIIFKATEYNATIEFYWTP 193
              I F+    +  ++F W P
Sbjct: 120 N--IPFEDKAASVKVDFLWHP 138


>sp|Q9UIR0|BTNL2_HUMAN Butyrophilin-like protein 2 OS=Homo sapiens GN=BTNL2 PE=2 SV=1
          Length = 455

 Score = 35.0 bits (79), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 240 KRSQM--EVLW--GSFGSPDGIHKDVLMPRVYEMAL---RTWSEWLEVNINRNKTQLFFV 292
           KR+ M  EV W      +P  +H+D +   V EM +   R W EW+E  I +    L   
Sbjct: 55  KRTTMHVEVRWYRSEPSTPVFVHRDGV--EVTEMQMEEYRGWVEWIENGIAKGNVALKIH 112

Query: 293 SMSPTHQRSEEWGGAKNGNCYGETEQIVQEGYWGRDTDLKMMGIVES 339
           ++ P+    + W   ++GN  GET  +++    G    + M G  ES
Sbjct: 113 NIQPS-DNGQYWCHFQDGNYCGETSLLLKVAGLGSAPSIHMEGPGES 158


>sp|P48867|COX1_CYACA Cytochrome c oxidase subunit 1 OS=Cyanidium caldarium GN=COX1 PE=3
           SV=1
          Length = 526

 Score = 32.7 bits (73), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 14  WAIRSIFQSLVALLIALLFFAAVYVTQNNVQLVE--------DRLITSKRSRDLLLSSPP 65
           W I S + + V+++  +LFF  VY+   N  + E        +RL +S R+ + L++SPP
Sbjct: 453 WNIVSTYGAKVSIIGTILFFYVVYLAFTNGLISEPNPWSLRRERLDSSSRTTEWLIASPP 512

Query: 66  RCNLFS 71
             + F+
Sbjct: 513 IYHTFN 518


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.136    0.438 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,563,217
Number of Sequences: 539616
Number of extensions: 6436363
Number of successful extensions: 13809
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 13804
Number of HSP's gapped (non-prelim): 7
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)