BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014933
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04212|Y2090_ARATH Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana
GN=At2g40090 PE=2 SV=2
Length = 538
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/414 (75%), Positives = 362/414 (87%)
Query: 1 MRESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKV 60
MRESMLNKCP+SSY+QVC+VFKKE+G+ PDQVF +FDPVPIASASLAQVHVAR DG+KV
Sbjct: 125 MRESMLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHDGKKV 184
Query: 61 AVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNS 120
AVKVQH HMTDTAAAD A V +LVNTLH +FPSFDYRWL+ EM ESLPKELDFL+EAKN+
Sbjct: 185 AVKVQHAHMTDTAAADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNN 244
Query: 121 EKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVS 180
EK L+NF KLSPHIA Y+YAP +YWNLSTSKLL MEF+DGAQVNDV IRKLGI P+EVS
Sbjct: 245 EKCLDNFRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDKIRKLGIQPYEVS 304
Query: 181 RLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDAT 240
+LVSQ FAEMMFKHGFVHCDPHAANL+VRP PS K++I GKRKPQL+++DHGLYKELD
Sbjct: 305 KLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKELDFN 364
Query: 241 TKFNYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQ 300
T+FNYA+LWKAL+F+DA AIKE+S KLGAG+DLYVLFAGILTMRPW +V D +VDHLVIQ
Sbjct: 365 TRFNYASLWKALVFSDAKAIKEHSEKLGAGDDLYVLFAGILTMRPWKQVIDTSVDHLVIQ 424
Query: 301 GTDGDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVII 360
G D SELQMYASQYF +I+ELLRRLPRVILLMLKTNDCLR+VNN L+QGSS ESF+II
Sbjct: 425 GNKEDVSELQMYASQYFSEISELLRRLPRVILLMLKTNDCLRSVNNELMQGSSLESFLII 484
Query: 361 GRVSSKAVIEAKLLQSKSFLRRLSVWLEEILLEVRLFSIEMFLWLLQIRKALFL 414
G+VSS+AV+EAK + KS ++ L VW E +E RL+ ++ LW+LQ+RK+L L
Sbjct: 485 GKVSSQAVLEAKRAEKKSLMKWLKVWFEGFSVEARLWVMQFALWILQVRKSLTL 538
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 297 bits (761), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 238/386 (61%), Gaps = 22/386 (5%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P SS ++ V +++LGK +F FD P+ +ASLAQVH A DG+ VAVKVQH
Sbjct: 127 SQAPQSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQH 186
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKV--- 123
+ ++ D +E+LV + LFP F++ WLV E +++LP ELDFL E +N+EKV
Sbjct: 187 PKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQM 246
Query: 124 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
L +F +++ P+++W+LST ++L+MEFVDG QVND + + ID +E+SR +
Sbjct: 247 LRHF--------DFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHL 298
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
+ ++EM+F +GFVHCDPH N+LVR P G K +++L+DHGLY+ L +
Sbjct: 299 GKMYSEMIFVNGFVHCDPHPGNVLVRKHP-------GTGKAEIVLLDHGLYQMLTEEFRL 351
Query: 244 NYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTD 303
NY LW++LI+ D +KEYS +LGAG DLY LFA +LT R W+ V +R + + T+
Sbjct: 352 NYCHLWQSLIWTDMKRVKEYSQRLGAG-DLYPLFACMLTARSWDSV-NRGISQAPVTATE 409
Query: 304 GDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRV 363
E++ A+ Y PQI+ LL +PR +LL+LKTND LR + L +S SF+ + R
Sbjct: 410 D--LEIRNNAANYLPQISHLLNHVPRQMLLILKTNDLLRGIEAALGTRASASSFLNMSRC 467
Query: 364 SSKAVIEAKLLQSKSFLRRLSVWLEE 389
+A+ E K + SF RR + E
Sbjct: 468 CIRALAEHKKKNTCSFFRRTQISFSE 493
>sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus
musculus GN=Adck1 PE=2 SV=1
Length = 525
Score = 285 bits (728), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 238/386 (61%), Gaps = 22/386 (5%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P SS +V V +++LGK +F FD P+ +ASLAQVH A DG+ VAVKVQH
Sbjct: 120 SQAPQSSMQEVRQVIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQH 179
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKV--- 123
+ ++ D +E+LV + LFP F++ WLV E +++LP ELDFL E +N+EKV
Sbjct: 180 PKVQAQSSKDILLMEVLVLAVKQLFPDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAHM 239
Query: 124 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
L +F +++ P+++W LST ++L+MEFV+G QVND + K ID +E+S +
Sbjct: 240 LRHF--------DFLKVPQIHWELSTKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHL 291
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
+ ++EM+F +GFVHCDPH N+LVR P K+ +++L+DHGLY+ L +
Sbjct: 292 GKMYSEMIFVNGFVHCDPHPGNVLVRKRPDTGKA-------EIVLLDHGLYQVLTEEFRL 344
Query: 244 NYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTD 303
+Y LW++LI+ D + +K+YS +LGA DLY LFA +LT R W+ V + + + T+
Sbjct: 345 DYCHLWQSLIWTDMDGLKQYSQRLGAA-DLYPLFACMLTARSWDSVK-QGIGQAPVSATE 402
Query: 304 GDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRV 363
SE++ A+ Y P+I++LL +PR +LL+LKTND LR++ L SS SF+ + R
Sbjct: 403 D--SEIRNNAACYLPEISQLLNHVPRQMLLILKTNDLLRSIETTLGTRSSASSFLNMSRC 460
Query: 364 SSKAVIEAKLLQSKSFLRRLSVWLEE 389
+A+ E K + SF RR + E
Sbjct: 461 CIRALAEHKKRDAGSFFRRTQISFSE 486
>sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus
gallus GN=ADCK1 PE=2 SV=1
Length = 519
Score = 281 bits (718), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 251/402 (62%), Gaps = 22/402 (5%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P S+ ++ V +++LGK ++F F+ P+ +ASLAQVH A +DG+ VAVK+QH
Sbjct: 117 SQAPQSTRQEIEQVIREDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQH 176
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKV--- 123
+ ++ D +E+L+ + +FP F++ WLV E +++LP ELDFL E +N+EKV
Sbjct: 177 PKVQAQSSKDIFLMEVLLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQM 236
Query: 124 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
L+NF ++ P++YW LST ++L+MEF++G QVND + K GID +E+SR +
Sbjct: 237 LKNF--------EFLKVPRIYWELSTRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNL 288
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
+ ++EM+F +GFVHCDPH N+LV+ P K+ +IL+DHGLY+ L + +
Sbjct: 289 GKLYSEMIFVNGFVHCDPHPGNVLVKKCPDSGKAY-------IILLDHGLYQVLSESFRM 341
Query: 244 NYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTD 303
+Y LW ALI AD +++YS +LGAG DLY LFA +LT R W V +R +D + ++
Sbjct: 342 DYCRLWLALIKADMKRVQKYSRRLGAG-DLYPLFACMLTARSWESV-NRGIDQSPVSASE 399
Query: 304 GDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRV 363
E++ A+ Y PQIT+LL +PR +LL+LKTND LR + + L +S SF+ + R
Sbjct: 400 D--VEIRSNAAAYLPQITQLLNNVPRQMLLLLKTNDLLRGIESALHTRASASSFLNMSRC 457
Query: 364 SSKAVIEAKLLQSKSFLRRLSVWLEEILLEVRLFSIEMFLWL 405
+AV + +S S RR+ + L E L ++ E+FLWL
Sbjct: 458 CIRAVSTYQRSKSHSLYRRVHISLTEALSLWQINLYELFLWL 499
>sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
laevis GN=adck1 PE=2 SV=1
Length = 520
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 245/399 (61%), Gaps = 18/399 (4%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + + V V +++LGK +VF++F+ P+ +ASLAQVH A +DG+KVAVKVQH
Sbjct: 120 SQAPCTPFTDVVQVIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQH 179
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLEN 126
+ ++ D +E+L++ + +FP F++ WL+ E +++LP ELDF E +N+EK+
Sbjct: 180 PKVQAQSSRDILIMEVLLHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSI 239
Query: 127 FWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQA 186
S ++ P++YW LST ++L+ME+++G QVND + +++ ID ++VS + +
Sbjct: 240 VSSFS-----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKL 294
Query: 187 FAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYA 246
++EM+F HGFVHCDPH N+LVR P P++IL+DHGLY+ L + + +Y
Sbjct: 295 YSEMIFVHGFVHCDPHPGNVLVRQNPENC-------APEIILLDHGLYQVLTESFRLDYC 347
Query: 247 ALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTDGDR 306
+LW+ALI AD I+ YS +LGAGE LY LFA +LT R W V ++ V + +
Sbjct: 348 SLWQALIAADKERIRIYSQRLGAGE-LYPLFACMLTARSWESVNRGIYENTV---SKEEI 403
Query: 307 SELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRVSSK 366
E++ A+ Y P+I++LL +PR +LL+LKTND LR + L SS +F + R +
Sbjct: 404 HEIRSNAATYLPEISQLLASVPRQMLLLLKTNDLLRGIETSLGTHSSSSAFFYMSRCCVR 463
Query: 367 AVIEAKLLQSKSFLRRLSVWLEE--ILLEVRLFSIEMFL 403
A+ + ++ S + + L E L +++++ I + L
Sbjct: 464 ALARHRKEKADSLWSYIHISLSETFCLGQLQMYEIALRL 502
>sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus
tropicalis GN=adck1 PE=2 SV=1
Length = 523
Score = 261 bits (668), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 256/420 (60%), Gaps = 31/420 (7%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + + V V +++LGK +VF +F+ P+ +ASLAQVH A +DG+KVAVKVQH
Sbjct: 120 SQAPCTPFPDVVQVIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQH 179
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEK---V 123
+ +A D +E+L++ + +FP F++ WL+ E +++LP ELDF E +N+EK +
Sbjct: 180 PKVQAQSARDILLMEVLLHAVKKIFPQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAI 239
Query: 124 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
+ +F +++ P++YW LST ++L+ME+++G QVND + +++ ID ++V+R +
Sbjct: 240 VSSF--------SFLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARAL 291
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
Q ++EM+F HGFVHCDPH N+LVR P P++IL+DHGLY+ L + +
Sbjct: 292 GQLYSEMIFVHGFVHCDPHPGNVLVRQNPE-------TLVPEIILLDHGLYQVLTESFRL 344
Query: 244 NYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTD 303
+Y +LW+ALI AD I+ YS +LGAGE LY LFA +LT R W V + V +
Sbjct: 345 DYCSLWQALIAADMQQIRIYSQRLGAGE-LYPLFACMLTARSWESVNQGIYQNTV---SR 400
Query: 304 GDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRV 363
+ E++ A+ Y P+I++LL +PR +LL+LKTND LR + L +S SF+ + R
Sbjct: 401 EEALEIRSNAATYLPEISQLLASVPRQMLLLLKTNDLLRGIETSLGTHASSSSFLNMSRC 460
Query: 364 SSKAVIEAKLLQSKSFLRRLSVWLEEI--LLEVRLFSIEMFL-------WLLQIRKALFL 414
+A+ + ++ S + + L E L +++++ I + L W+ ++ + +FL
Sbjct: 461 CVRALARHRKEKTDSLWSYIHISLAETFSLGQLQIYEIVLRLQASCVGCWIRRMMQWVFL 520
>sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium
discoideum GN=abkB PE=3 SV=1
Length = 668
Score = 228 bits (581), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 199/341 (58%), Gaps = 33/341 (9%)
Query: 9 CPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVAR----NRDGQKVAVKV 64
P ++++V +FK E GK PD +F DF+ +PI SASLAQVH A+ N + +VAVKV
Sbjct: 288 APFVTFEEVEKLFKIETGKHPDDMFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKV 347
Query: 65 QHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVL 124
Q+ + + D +++ ++ + FPSF + W++ E L +ELDF+ EAKNSEK+
Sbjct: 348 QYPGLMNKFQKDMDSLDNVLTYITLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMK 407
Query: 125 ENFWKLSPHIANY-IYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
+ F I N + PKVYWN +T ++L MEF+ G ++++ + + KLGID E+ L
Sbjct: 408 QLF------IGNQQLSIPKVYWNHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLF 461
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
S FA+ +F HGF+H DPH NLLVR P+ KP L+L+DHGLYK++D +
Sbjct: 462 SDIFAQQIFVHGFLHSDPHPGNLLVRKTPN--------GKPDLVLLDHGLYKKIDENVRL 513
Query: 244 NYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTD 303
++ LWK+L DA + Y+ +LGAG +Y GIL N ++ ++L
Sbjct: 514 DFCHLWKSLCLGDAKTSEFYAERLGAG--IYAKHLGIL----LNLNPSKSRENL------ 561
Query: 304 GDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAV 344
R+ + Q I E+L+ LP+ ILL+LKTN+ +R +
Sbjct: 562 --RNMKRELKDQTLVVINEILKNLPKEILLVLKTNNLIRQI 600
>sp|O60111|YG62_SCHPO ABC1 family protein C15C4.02 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC15C4.02 PE=3 SV=2
Length = 557
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 214/384 (55%), Gaps = 25/384 (6%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQK-VAVKVQ 65
++CP +S + +F+ + GK D+ FD+FDP+ + ASLAQVH AR +D VAVKVQ
Sbjct: 152 DRCPSTSLKDIDHLFRVDTGKGLDETFDEFDPIALGVASLAQVHKARLKDSDVWVAVKVQ 211
Query: 66 HTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLE 125
H ++ + D + + + FP F WL E+ SLP+ELDF EAKNS + E
Sbjct: 212 HPSVSLNSPLDLSMTRWVFKAIKTFFPDFKLMWLADEIERSLPQELDFTREAKNSIETKE 271
Query: 126 NFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQ 185
+F H++ +Y P+V W S ++L+ME+V GA+++++ + + I VS +
Sbjct: 272 HF----AHLSTSLYVPEVMW--SKPRILVMEYVAGARIDNLSFMDEHSISRDLVSVDICH 325
Query: 186 AFAEMMF-KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFN 244
F EM+F K G +HCDPH N+L+R P KS R +++L+DHGLY+++ + +
Sbjct: 326 IFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSKS---PRNYEIVLLDHGLYRDIPHELQVD 382
Query: 245 YAALWKALIFADANAIKEYSVKLG-AGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTD 303
YA +W +I + +K Y+ K+ ++ + +FA +T RP+ +++ L I G +
Sbjct: 383 YANMWLNIINFNEKNLKFYAKKVANVSDENFPIFATAITGRPY-----KSLKSLPIGGPN 437
Query: 304 GDRSELQMYAS----QYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPES-FV 358
+ + + ++ I LL +PR+ LL++KTND +R+++ L S PE ++
Sbjct: 438 HEEEQKKFISALQKGGMLQSIIRLLSTMPRLTLLLMKTNDLVRSLDENLKTKSGPEKLYL 497
Query: 359 IIGRVSSKAVIEAK---LLQSKSF 379
I+ R + V + K L S+SF
Sbjct: 498 IMARYCLRCVYDDKMDSLWNSRSF 521
>sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus
musculus GN=Adck5 PE=2 SV=2
Length = 582
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 236/410 (57%), Gaps = 28/410 (6%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
+K + +V ++F ++ P+++F +FD P+A+ASLAQVH A+ DG VAVKVQ+
Sbjct: 172 DKALTRGFREVDELFLEDFQALPNELFQEFDYEPMAAASLAQVHRAKLHDGTDVAVKVQY 231
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLEN 126
+ D D T+ELL+ + + PSF + W++ +++ +L +ELDF E +N+E+ +
Sbjct: 232 IDLRDRFDGDVQTLELLLRLVELMHPSFGFSWVLQDLKGTLVQELDFENEGRNAERCAQE 291
Query: 127 FWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQA 186
H +Y+ P+V+W+ S+ ++L +F +G +VND++ I+ G+ +V++ + Q
Sbjct: 292 L----KHF-HYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQT 346
Query: 187 FAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYA 246
FAE +F GF+H DPH N+LVR P K +L+L+DHGLY+ LD + +
Sbjct: 347 FAEQIFHTGFIHSDPHPGNVLVRKGPDG--------KAELVLLDHGLYQFLDEKDRSSLC 398
Query: 247 ALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTDGDR 306
LW+A+I D A+K+++ LG + Y+LF+ +L RP R+ HL+ + +
Sbjct: 399 QLWRAIILRDNAAMKKHAAALGVQD--YMLFSEVLMQRP-VRLGQLWGSHLI---SREEA 452
Query: 307 SELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRVS-- 364
+ +Q A ++F I E+L+ LPR +LL+L+ + +RA+N+ L G+ + + ++ + +
Sbjct: 453 AYMQDMAREHFDGIMEVLKALPRPMLLVLRNINTVRAINSNL--GTPVDRYFLMAKSAVW 510
Query: 365 --SKAVIEA-KLLQSKSFLRRLSVWLEEILLEV--RLFSIEMFLWLLQIR 409
S+ V A + + S LR + V E + E+ RL + M L L +R
Sbjct: 511 GWSRLVGAAYQGIYGSSLLRHIKVLWEALKFEMALRLEILAMRLTALMLR 560
>sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium
discoideum GN=abkD PE=2 SV=1
Length = 695
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 225/401 (56%), Gaps = 20/401 (4%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + +V VF K+LG P+ F DFD +PIA+ASLAQVH A ++G++VAVKVQ+
Sbjct: 289 DQAPWRDFYEVESVFLKDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQY 348
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLEN 126
+ D T +L+ ++ FP F++ W+ EM+ L KELDF EA N+E+ ++
Sbjct: 349 VDLQRNFDGDIFTHNVLLTLVNMAFPDFEFNWMAEEMKNVLIKELDFSQEADNAERAAQD 408
Query: 127 FWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQA 186
LS + N Y PKV+ S+ ++L EF+ G ++N+V++IR +G+ VS+ +
Sbjct: 409 ---LSSN--NNAYIPKVFRPYSSKRILTTEFIHGCKINNVQAIRSMGLSEKTVSQRFMEI 463
Query: 187 FAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYA 246
E +F H FVH DPHA N+LVR P+ +PQ++L+DHGLY+E D + N+
Sbjct: 464 MCEQIFIHAFVHVDPHAGNVLVRQHPNH------PNQPQIVLLDHGLYREYDEEFRLNFC 517
Query: 247 ALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTDGDR 306
L+K L+ + +++YS LG + LF+ ++ MR + + + + + +
Sbjct: 518 NLYKNLVLCNNKKVEKYSKALGVQN--WKLFSTMILMRNFEGSSVGLSNSI----SSEEL 571
Query: 307 SELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRVSSK 366
+L A + I L++ +PR +LL+L+ N+ LR++N L GS F I+ R ++K
Sbjct: 572 EKLLSGAIERLKDINLLMKAMPRHLLLILRNNNLLRSINMEL--GSPVNRFSIMARYAAK 629
Query: 367 AVIEAKLLQSKSFLRRLSVWLEEILLEVRLFSIEMFLWLLQ 407
+ + ++ +R + E++ LEV L E++ + +
Sbjct: 630 G-LNSNSSKNSGIIRLVKSVEEKVSLEVMLKGYELYYYFVN 669
>sp|Q3MIX3|ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 OS=Homo
sapiens GN=ADCK5 PE=2 SV=2
Length = 580
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 225/410 (54%), Gaps = 28/410 (6%)
Query: 13 SYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDT 72
+ +V ++F ++ P ++F +FD PIA+ASLAQVH A+ DG VAVKVQ+ + D
Sbjct: 178 GFQEVDELFLEDFQALPHELFQEFDYQPIAAASLAQVHRAKLHDGTSVAVKVQYIDLRDR 237
Query: 73 AAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D T+ELL+ + + PSF + W++ +++ +L +ELDF E +N+E+
Sbjct: 238 FDGDIHTLELLLRLVEVMHPSFGFSWVLQDLKGTLAQELDFENEGRNAERCARELAHFP- 296
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
Y+ P+V+W+ S+ ++L +F G +VNDV++IR G+ H+++ + +AFAE +F
Sbjct: 297 ----YVVVPRVHWDKSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFAEQIF 352
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKAL 252
GF+H DPH N+LVR P K +L+L+DHGLY+ L+ + LW+A+
Sbjct: 353 YTGFIHSDPHPGNVLVRKGPDGKA--------ELVLLDHGLYQFLEEKDRAALCQLWRAI 404
Query: 253 IFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQGTDGDRSELQMY 312
I D A++ ++ LG + Y+LFA +L RP R+ HL+ + + + +
Sbjct: 405 ILRDDAAMRAHAAALGVQD--YLLFAEMLMQRP-VRLGQLWGSHLL---SREEAAYMVDM 458
Query: 313 ASQYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSPESFVIIGRVSSK-----A 367
A + F + +LR LPR +LL+L+ + +RA+N L G+ + + ++ + + + A
Sbjct: 459 ARERFEAVMAVLRELPRPMLLVLRNINTVRAINVAL--GAPVDRYFLMAKRAVRGWSRLA 516
Query: 368 VIEAKLLQSKSFLRRLSVWLEEILLEV--RLFSIEMFLWLLQIRKALFLA 415
+ + S LR V E + EV RL ++ M L L R + L+
Sbjct: 517 GATYRGVYGTSLLRHAKVVWEMLKFEVALRLETLAMRLTALLARALVHLS 566
>sp|Q06567|YL253_YEAST ABC1 family protein YLR253W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YLR253W PE=1 SV=1
Length = 569
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 220/420 (52%), Gaps = 34/420 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVA--RNRDGQ--KVAV 62
+ CP S+Y+++ ++FK++LG + + +F +F+ PI ASLAQVHVA +N DG+ VAV
Sbjct: 150 DHCPESTYEEIDELFKEDLGTSIEDMFLEFNKTPIGVASLAQVHVAKLKNSDGKGSSVAV 209
Query: 63 KVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEK 122
K QH + + D + L FP + WL E++ S+ EL+F EA+N+EK
Sbjct: 210 KCQHPSLKEFIPLDVMLTRTVFELLDVFFPDYPLTWLGDELQSSIYVELNFTKEAENAEK 269
Query: 123 VLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRL 182
F K A I PKV S ++LIME+V G +++D++ I GI EVS
Sbjct: 270 TRHYFSKFKKQTALKI--PKVI--ESHKRILIMEYVGGKRLDDLEYIDSHGISRSEVSSC 325
Query: 183 VSQAFAEMMFKHGF-VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATT 241
+S F M+F +HCDPH NL +R V K + G +++L DHGLY+ T
Sbjct: 326 LSHIFNNMIFTPNVGIHCDPHGGNLAIRSVKPAKDN--GYHNFEIVLFDHGLYRYPSTRT 383
Query: 242 KFNYAALWKALIF-ADANAIKEYSVKLGA-GEDLYVLFAGILTMRPWNRVTDRAVDHLVI 299
+ YA W +L+F D +K+Y+ ++ + L A +T R D A+++ +
Sbjct: 384 RRLYAKFWLSLLFDKDQTKMKKYAKGFANITDEQFPLLAAAIT----GRSIDAALNYDI- 438
Query: 300 QGTDGDRSELQMYAS-----QYFPQITELLRRLPRVILLMLKTNDCLRAVNNCLLQGSSP 354
T + E+ + A+ + +L R+PRV+LL+LKTND R ++ CL P
Sbjct: 439 -STSRTQEEMDVMANGILEGTLLSDLMSILSRIPRVVLLILKTNDLTRHLDECLQNPLGP 497
Query: 355 E-SFVIIGRVSSKAVIEAKLLQSKSFLRRLSV-WLEE-----ILLEVR---LFSIEMFLW 404
E +F+I+ + +K V + K+ + S R S+ W+ E I+ E R L+ + LW
Sbjct: 498 ERTFLIMTQYCAKTVYDEKVERINSEYARWSIKWMWENLTNWIVYERRINQLYFYDFVLW 557
>sp|P96936|Y647_MYCTU Uncharacterized protein Rv0647c/MT0675 OS=Mycobacterium
tuberculosis GN=Rv0647c PE=3 SV=1
Length = 488
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 142/284 (50%), Gaps = 25/284 (8%)
Query: 4 SMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVK 63
+L++ P + D+V +F +ELG P ++F F+ P ASAS+AQVH A R G++V VK
Sbjct: 131 GLLDRVPPAKTDEVHKLFVEELGDEPARLFASFEEEPFASASIAQVHYATLRSGEEVVVK 190
Query: 64 VQHTHMTDTAAADHATVELLVNT--LHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSE 121
+Q + AAD ++ T L L + +VA+ ++L +ELDF LEA++ E
Sbjct: 191 IQRPGIRRRVAADLQILKRFAQTVELAKLGRRLSAQDVVADFADNLAEELDFRLEAQSME 250
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
+ + SP + I P+V+W+ +T ++L ME V G ++++ +IRK G D E+ +
Sbjct: 251 AWVSHL-HASP-LGKNIRVPQVHWDFTTERVLTMERVHGIRIDNAAAIRKAGFDGVELVK 308
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATT 241
+ + E +HG H D HA NL V +++ D G+ +D T
Sbjct: 309 ALLFSVFEGGLRHGLFHGDLHAGNLYV------------DEAGRIVFFDFGIMGRIDPRT 356
Query: 242 KFNYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRP 285
++ L AL+ +A A + VL + TM+P
Sbjct: 357 RWLLRELVYALLVKKDHA---------AAGKIVVLMGAVGTMKP 391
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 124/240 (51%), Gaps = 21/240 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P SY+Q + ++ELGK +++ FDPVP+A+ASL QVH A+ G+ V VKVQ
Sbjct: 126 DEVPAFSYEQAAGIIEEELGKPIAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQR 185
Query: 67 THMTDTAAADHATVELLV----NTLHWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSEK 122
+ D A ++ + N W D+ + E + L +E D+L E ++++
Sbjct: 186 PGLKKLFTIDLAILKKIAQYFQNHPKW-GRGRDWNGIYEECCKILWQETDYLREGRSADT 244
Query: 123 VLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRL 182
NF +++ P+VYW +++++L +E++ G +++ ++ G++ E+++L
Sbjct: 245 FRRNF-----RGEDWVKVPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQL 299
Query: 183 VSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTK 242
++A+ + HGF H DPH NL V P E LI D G+ E+ TK
Sbjct: 300 GARAYLFQLLNHGFFHADPHPGNLAVSPEAGE-----------LIFYDFGMMGEITPDTK 348
>sp|P73121|Y1919_SYNY3 Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1919 PE=3 SV=1
Length = 566
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 20/265 (7%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P D + +++LG D+ + + P+A+ASL QV+ A G++VAVKVQ
Sbjct: 111 DQLPPFDNDLAFQLMEEQLGMKVDEAYREISAHPVAAASLGQVYRAMLFSGEEVAVKVQR 170
Query: 67 THMTDTAAADHATVELLVNTLHWLFP---SFDYRWLVAEMRESLPKELDFLLEAKNSEKV 123
++ + D + L P D +V E L +E+D+L E +N+EK
Sbjct: 171 PNLRPRLSLDLYLMRLGAQKFGRFLPLNLGHDLTLIVDEFGIKLFEEIDYLNEGRNAEKF 230
Query: 124 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
ENF H + P +YW S K+L +E++ G ++ D IR G+DP ++ R+
Sbjct: 231 AENF-----HGDAEVKVPCIYWQYSNQKVLTLEWIQGFKLTDTDKIRAAGLDPSDIIRIG 285
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
+ + +HGF H DPH NL ++ G+ + ID G+ +L+ TK
Sbjct: 286 VTSGLRQLLEHGFFHADPHPGNLFA--------TLDGR----MAYIDFGMMDQLEPGTKE 333
Query: 244 NYAALWKALIFADANAIKEYSVKLG 268
A+ LI D A+ E + LG
Sbjct: 334 TIASSIVQLINKDYLALTEDFIALG 358
>sp|O42653|YF9E_SCHPO ABC1 family protein C10F6.14c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC10F6.14c PE=3 SV=1
Length = 535
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 20/366 (5%)
Query: 3 ESMLNKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAV 62
+ M + P ++++ D+FK++ G+ ++VF + ASAS+AQVH A G+KVAV
Sbjct: 147 QGMFDNAPQVEWEELQDIFKEQYGRPVEEVFASIEKRAAASASIAQVHRAVLPSGEKVAV 206
Query: 63 KVQHTHMTDTAAADHATVELLVNTL-HWLFPSFDYRWLVAEMRESLPKELDFLLEAKNSE 121
K+Q + + D + ++ W+F Y + V + E L E+DF EA NSE
Sbjct: 207 KIQKPDVAKQMSWDLLVYKYMMYVYDKWIFHIPLY-FTVDYVSERLRSEVDFTTEANNSE 265
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
E + + ++ + IY PKVY +S ++++ E+ DG + D ++ + G+ E+
Sbjct: 266 HAREGV-EETDYLRDKIYIPKVYKEISGKRVMVTEWADGIPLYDQTALSEAGMSKKEILT 324
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATT 241
+ + A MF VHCDPH N+LVR K+ G Q +++DHGLY
Sbjct: 325 NLFRFLAFQMFHSKQVHCDPHPGNILVR------KNQAG--LCQTVILDHGLYVFESEKF 376
Query: 242 KFNYAALWKALIFADANAIKEYSVKLGAGEDLYVLFAGILTMRPWNRVTDRAVDHLVIQG 301
+ +A L+ A D +I + G G+ LFA + P + + ++
Sbjct: 377 RKEFALLFTAAYSLDKKSILQVMDAWGIGQP--ELFANRMLNIPMDEEQPHTGEKII--- 431
Query: 302 TDGDRSELQMYASQYFPQITELLRRLPRVILLMLKTNDCLRAVN-NCLLQGSSPESFVII 360
+ + + Q+ + F + RLP+ +L++ + CL + N G S ++
Sbjct: 432 SKKEAFQQQLAERKKFIGFLQDCTRLPKELLMLGR---CLMLIQKNNQNFGYPVNSIAVM 488
Query: 361 GRVSSK 366
+V+ K
Sbjct: 489 AKVADK 494
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHAT 79
+ + LGK+ + F FD VP+ASAS++QVH A D + V VKV + + D A
Sbjct: 106 IIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDIEHQISDDIAL 165
Query: 80 VELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIAN 136
++ L + P+ D R +VAE+ +L ELD E N+ VL FW+ S +
Sbjct: 166 LKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANA-SVLRRFWEAS----D 220
Query: 137 YIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGF 196
IY P+V W+ + ++L +E + G +D+ + GID +S + F +F+ F
Sbjct: 221 DIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNF 280
Query: 197 VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKALIFAD 256
H D H+ N+ V P+ K + P+ I++D G+ +L ++ A + A+ D
Sbjct: 281 FHADAHSGNIWVDSDPARKSN------PRFIVLDFGIMGQLSQKDQYYLAENFMAIFHKD 334
Query: 257 ANAIKEYSVKLG 268
I E V+ G
Sbjct: 335 YRRIAELHVEAG 346
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHAT 79
+ + LGK+ + F FD VP+ASAS++QVH A D + V VKV + + D A
Sbjct: 106 IIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRAVVVKVLRPDIEHQISDDIAL 165
Query: 80 VELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIAN 136
++ L + P+ D R +VAE+ +L ELD E N+ VL FW+ S +
Sbjct: 166 LKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANA-SVLRRFWEAS----D 220
Query: 137 YIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGF 196
IY P+V W+ + ++L +E + G +D+ + GID +S + F +F+ F
Sbjct: 221 DIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNF 280
Query: 197 VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKALIFAD 256
H D H+ N+ V P+ K + P+ I++D G+ +L ++ A + A+ D
Sbjct: 281 FHADAHSGNIWVDSDPARKSN------PRFIVLDFGIMGQLSQKDQYYLAENFMAIFHKD 334
Query: 257 ANAIKEYSVKLG 268
I E V+ G
Sbjct: 335 YRRIAELHVEAG 346
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHAT 79
+ + LGK+ + F FD VP+ASAS++QVH A D ++V VKV + + D A
Sbjct: 106 IIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRREVVVKVLRPDIEHQISDDIAL 165
Query: 80 VELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIAN 136
++ L + P+ D R +VAE+ +L ELD E N+ VL FW+ S +
Sbjct: 166 LKSLATLVEHTHPNADKIRPREIVAEIETTLAAELDLQREGANA-SVLRRFWEAS----D 220
Query: 137 YIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGF 196
IY P+V W+ + ++L +E + G +D+ + GID +S + F +F+ F
Sbjct: 221 DIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNF 280
Query: 197 VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKALIFAD 256
H D H+ N+ V P+ K + P+ I +D G+ +L ++ A + A+ D
Sbjct: 281 FHADAHSGNIWVDSDPARKSN------PRFIALDFGIMGQLSQKDQYYLAENFMAIFHKD 334
Query: 257 ANAIKEYSVKLG 268
I E V+ G
Sbjct: 335 YRRIAELHVEAG 346
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHAT 79
+ + LGK+ + F FD VP+ASAS++QVH A DG++V VKV + + D A
Sbjct: 106 IIETALGKSVESAFAHFDTVPLASASISQVHAATLHDGREVVVKVLRPDIEHQISDDIAL 165
Query: 80 VELLVNTLHWLFPSFDYRW---LVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIAN 136
++ L + P+ D +VAE+ +L ELD E N+ VL FW+ S +
Sbjct: 166 LKSLATLVEHTHPNADKIRPCEIVAEIETTLAAELDLQREGANA-SVLRRFWEAS----D 220
Query: 137 YIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGF 196
IY P+V W+ + ++L +E + G +D+ + GID +S + F +F+ F
Sbjct: 221 DIYVPEVIWSHTAEQVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNF 280
Query: 197 VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKALIFAD 256
H D H+ N+ V P+ K + P+ I +D G+ +L ++ A + A+ D
Sbjct: 281 FHADAHSGNIWVDSDPARKSN------PRFIALDFGIMGQLSQKDQYYLAENFMAIFHKD 334
Query: 257 ANAIKEYSVKLG 268
I E V+ G
Sbjct: 335 YRRIAELHVEAG 346
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 16/265 (6%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P D + LG+ ++VF FD P+ASAS+AQVH DG++VAVKV
Sbjct: 91 DRVPPFPSDVSRAAVVQSLGRPIEEVFASFDADPVASASIAQVHFGVLHDGREVAVKVLR 150
Query: 67 THMTDTAAADHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKV 123
++ + AD A + + L L P R +VAE L ELD EA N+ ++
Sbjct: 151 PNVLNIIEADLALLRVAAAWLERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQL 210
Query: 124 LENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLV 183
N L + I P++ W+LS++++L+ME + G ++ ++++R GID +++R
Sbjct: 211 RRNMGGL-----DLIMLPEMIWDLSSAEVLVMERMHGVPISQIETLRAAGIDIPKLARDG 265
Query: 184 SQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKF 243
F +F+ GF H D H N++V P + G+ I +D G+ LD+ K
Sbjct: 266 VTIFFTQVFRDGFFHADMHPGNIMVSTAP----ATFGR----YIALDFGIVGTLDSRDKE 317
Query: 244 NYAALWKALIFADANAIKEYSVKLG 268
A + A D + E ++ G
Sbjct: 318 YLAQNFLAFFRRDYRRVAELHIESG 342
>sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment)
OS=Clostridium pasteurianum PE=3 SV=1
Length = 530
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 20/265 (7%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
N P ++ + ++F +EL T D F FD PI SAS+AQVH A +DG+ V VK+Q
Sbjct: 74 NNVPPENFIDIENLFFEELSSTIDNTFLYFDKTPIGSASIAQVHDAILKDGRFVIVKIQR 133
Query: 67 THMTDTAAADHATVELLVNTLHWLFPS--FDYRWLVAEMRESLPKELDFLLEAKNSEKVL 124
+ + D + ++ L+N F D + + E+ S +ELDF+ E N +K
Sbjct: 134 PGIAEMMKTDLSIIKKLLNITKTKFTDALIDPKEAIDELFISTTQELDFINEINNIKK-- 191
Query: 125 ENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVS 184
F KL+ + ++ P L T K+++ME + G +++++K + G D E+ + ++
Sbjct: 192 --FKKLNEDVK-FVRTPYTIDKLCTEKIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLT 248
Query: 185 QAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFN 244
++ + +F+ GF H DPH NLL+ R+ + ID G+ + + K +
Sbjct: 249 LSYFKQVFQDGFFHGDPHPGNLLI-------------RENHICYIDFGIMGTISKSLKIS 295
Query: 245 YAALWKALIFADANAIKEYSVKLGA 269
A+ + D N + + +G
Sbjct: 296 LNDAILAVAYHDVNKMISVIMSIGV 320
>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=ubiB PE=3 SV=1
Length = 503
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 22 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVE 81
+K LG++ ++++ +F+ PIASAS+AQVH AR G++VAVKV ++ D + +
Sbjct: 107 EKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQDLSLMR 166
Query: 82 LLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIAN 136
+ LF D R L VAE + L ELD + EA N+ ++ NF H +N
Sbjct: 167 FGAAWVERLFS--DGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNF-----HNSN 219
Query: 137 YIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGF 196
+ PKV+++ TS +L +E++DG V D+ ++ GID H+++ + F +F+ GF
Sbjct: 220 MLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGF 279
Query: 197 VHCDPHAANLLV 208
H D H N+LV
Sbjct: 280 FHADMHPGNILV 291
>sp|Q8Y275|UBIB_RALSO Probable ubiquinone biosynthesis protein UbiB OS=Ralstonia
solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1
Length = 525
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNR----DGQKVAVKVQHTHMTDTAAA 75
+ ++ LGK +F FD P+ASAS+AQVH A R DG++VAVKV M +
Sbjct: 104 IVERSLGKPLSALFHRFDHHPVASASIAQVHFATLRGGPDDGREVAVKVLRPGMLPVIDS 163
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + + L+ R +VAE + L ELD + EA N+ ++ NF K
Sbjct: 164 DLALMRDVATWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAK--- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+V+W+ TS++ +ME + G +V+ +R G+D H+++R + F +F
Sbjct: 221 --SELLLVPEVFWDWCTSEVFVMERMHGVRVSHADELRAAGVDTHKLARDGVEIFFTQVF 278
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+LV P LG+ I +D G+ L K NY A
Sbjct: 279 RDGFFHADMHPGNILVSVAPES----LGR----YIALDFGIVGALSEFDK-NYLA 324
>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1
Length = 503
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 8/190 (4%)
Query: 22 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVE 81
+K LG++ ++++ +F+ PIASAS+AQVH AR G++VAVKV ++ D + +
Sbjct: 107 EKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMR 166
Query: 82 LLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANYI 138
+ LF R +VAE + L ELD + EA N+ ++ NF ++ +
Sbjct: 167 FGAGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNF-----QNSDML 221
Query: 139 YAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFVH 198
PKV+++ TS +L +E++DG V+D+ ++ GID H+++ + F +F+ GF H
Sbjct: 222 IVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFH 281
Query: 199 CDPHAANLLV 208
D H N+LV
Sbjct: 282 ADMHPGNILV 291
>sp|B1J2S6|UBIB_PSEPW Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain W619) GN=ubiB PE=3 SV=1
Length = 539
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 125/273 (45%), Gaps = 22/273 (8%)
Query: 3 ESMLNKCPVSSYD--QVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKV 60
E ML + V +D Q + + +LG +VF FD P+ASAS+AQVH AR + G++V
Sbjct: 91 ELMLLQDRVPPFDPKQAVALIESQLGAKVGEVFSRFDVEPLASASVAQVHAARLKTGEEV 150
Query: 61 AVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLL 115
VKV + A D A + L+ S D R L V + +++ ELD L
Sbjct: 151 VVKVVRPGLKPVIAQDLAWLFLIAKGAE--RASADARRLHPVEIVGDYEKTIYDELDLLR 208
Query: 116 EAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGID 175
EA N+ ++ NF + +Y P+VYW+L K+L+ME + G V D+ ++ D
Sbjct: 209 EAANASQLRRNF-----EGSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMATLADQRTD 263
Query: 176 PHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYK 235
++ + F +F+H F H D H N+ V S + PQ I ID G+
Sbjct: 264 MKLLAERGVEVFFTQVFRHSFFHADMHPGNIFV--------STVKPWSPQYIAIDCGIVG 315
Query: 236 ELDATTKFNYAALWKALIFADANAIKEYSVKLG 268
L A + A A D + E + G
Sbjct: 316 SLTAEDQDYLARNLIAFFKRDYRRVAELHIDSG 348
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVA--RNRDG---QKVA 61
++ P D V ++ LG+ +++F DFD P+ASAS+AQVH A R DG ++VA
Sbjct: 90 DRVPPFDGDIARQVVERSLGRKVEELFVDFDLKPVASASVAQVHKAWLRQPDGGRGREVA 149
Query: 62 VKVQHTHMTDTAAADHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAK 118
VKV + D + + L + LF R +VAE + L ELD + EA
Sbjct: 150 VKVLRPGILPVIEQDLSLMRTLAGWVEKLFADGKRLKPREVVAEFDKYLHDELDMMHEAA 209
Query: 119 NSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHE 178
N+ ++ NF ++ + P+V+++ S+ ++L +E++ G V ++ +R+ G+D +
Sbjct: 210 NASQLRRNF-----KGSDMLIVPEVFYDYSSREVLTLEWMHGIPVGQIERLREAGVDLQK 264
Query: 179 VSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELD 238
+SR + F +F+HGF H D H N+ V + I +D G+ L
Sbjct: 265 LSRFGVEIFFTQVFRHGFFHADMHPGNIFV------------AADGRYIALDFGIVGSLT 312
Query: 239 ATTKFNYAALWKALIFADANAIKEYSVKLG 268
T K A + A D + + ++ G
Sbjct: 313 DTDKHYLAVNFLAFFNRDYHRVATAHIESG 342
>sp|B2JCV1|UBIB_BURP8 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1
Length = 527
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 12/201 (5%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FDDF+ VP+ASAS+AQVH A + GQ +VAVKV +M +
Sbjct: 103 IIEKSLGAPVDTIFDDFERVPVASASIAQVHFATLKIGQHAGKQVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALLRDIAVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P++YW T+ +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMYWEYCTANVLVMERMVGVPISQVDTLRVAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPS 213
+ GF H D H N+ V P+
Sbjct: 278 RDGFFHADMHPGNIQVSLDPA 298
>sp|Q63X97|UBIB_BURPS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain K96243) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A3N5V1|UBIB_BURP6 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 668) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|Q3JVZ2|UBIB_BURP1 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1710b) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A3NRJ7|UBIB_BURP0 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1106a) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A1V750|UBIB_BURMS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain SAVP1) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|Q62MP2|UBIB_BURMA Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain ATCC 23344) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A2S8L4|UBIB_BURM9 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|A3MNU1|UBIB_BURM7 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1
Length = 525
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAA 75
+ +K LG D +FD+F+ VP+ASAS+AQVH A+ + G+ VAVKV +M +
Sbjct: 103 IVEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDS 162
Query: 76 DHATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSP 132
D A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 163 DLALMRDIATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-- 220
Query: 133 HIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMF 192
+ + P+++W+ ST +L+ME + G ++ V ++R G+D +++R + F +F
Sbjct: 221 ---DLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVF 277
Query: 193 KHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAA 247
+ GF H D H N+ V S+ K + I +D G+ L K NY A
Sbjct: 278 RDGFFHADMHPGNIQV--------SLDPKHFGRYIALDFGIVGALSDFDK-NYLA 323
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 20/236 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P Q + +++LGK +VF FD P+ASAS+AQVH A+ + G++V VKV
Sbjct: 97 DRVPPFDSQQSMKLIEEQLGKKISEVFSRFDVDPLASASVAQVHAAQLKTGEEVVVKVIR 156
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSE 121
+ D A + +L S D R L VA+ +++ ELD L EA N+
Sbjct: 157 PGLKPIIGQDLAWLFILARAAERF--SADARLLHPVDVVADYEKTIYDELDLLREAANAS 214
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
++ NF + SP +Y P+VYW+ K+L+ME + G QV D+ ++ D ++
Sbjct: 215 QLKRNF-EGSP----LLYVPQVYWDWCRPKVLVMERIYGVQVTDLATLADQRTDMKMLAE 269
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 237
+ F +F+ F H D H N+ V S + PQ I ID G+ L
Sbjct: 270 RGVEIFFTQVFRDSFFHADMHPGNIFV--------STVNPWSPQYIAIDCGIVGSL 317
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 20/238 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + +++LG +VF FD P+ASAS+AQVH AR + G++V VKV
Sbjct: 98 DRVPPFDPQHAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAARLKSGEEVVVKVVR 157
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSE 121
+ A D A + L+ S D R L V + +++ ELD L EA N+
Sbjct: 158 PGLKPVIAQDLAWLFLIAKAAE--RASADARRLHPVEIVGDYEKTIYDELDLLREAANAS 215
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
++ NF + +Y P+VYW+L K+L+ME + G V D+ ++ D ++
Sbjct: 216 QLRRNF-----EGSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMATLADQRTDMKMLAE 270
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDA 239
+ F +F+ F H D H N+ V S + PQ I ID G+ L A
Sbjct: 271 RGVEVFFTQVFRDSFFHADMHPGNIFV--------STVKPWSPQYIAIDCGIVGSLTA 320
>sp|Q145N7|UBIB_BURXL Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
xenovorans (strain LB400) GN=ubiB PE=3 SV=1
Length = 525
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 22 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADH 77
+K LG D +FDDF+ VP+ASAS+AQVH A + GQ VAVKV +M +D
Sbjct: 105 EKSLGAPVDVLFDDFERVPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDL 164
Query: 78 ATVELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHI 134
A + + L+ R +VAE + L ELD + EA N ++ NF L
Sbjct: 165 ALLRDIAVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL---- 220
Query: 135 ANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKH 194
+ + P++YW T +L+ME + G ++ V+++R G+D +++R + F +F+
Sbjct: 221 -DLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRD 279
Query: 195 GFVHCDPHAANLLVRPVPS 213
GF H D H N+ V P+
Sbjct: 280 GFFHADMHPGNIQVSLDPA 298
>sp|Q2NWT9|UBIB_SODGM Probable ubiquinone biosynthesis protein UbiB OS=Sodalis
glossinidius (strain morsitans) GN=ubiB PE=3 SV=1
Length = 544
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 20/252 (7%)
Query: 22 KKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQHTHMTDTAAADHATVE 81
++ +G+ + FDDF P+ASAS+AQVH AR ++GQ+V +KV + AD +
Sbjct: 110 ERSMGQPLETWFDDFQQEPLASASIAQVHTARLKNGQEVVIKVIRPDILPMIKADMRLMY 169
Query: 82 LLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIAN 136
L + + L P D R L V E ++L EL+ L EA N+ ++ NF SP
Sbjct: 170 RLASWVPHLLP--DGRRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNF-DGSP---- 222
Query: 137 YIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGF 196
+Y P+VY + + +++ME + G VNDV ++ K G + ++ Q F +F+ F
Sbjct: 223 MLYIPEVYPDYCSETMMVMERIYGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSF 282
Query: 197 VHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKALIFAD 256
H D H N+ V S PQ I ID G+ L+ K A + A D
Sbjct: 283 FHGDMHPGNIFV--------SFEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRD 334
Query: 257 ANAIKEYSVKLG 268
+ E V G
Sbjct: 335 YRKVAELHVDSG 346
>sp|A5WA47|UBIB_PSEP1 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ubiB PE=3 SV=1
Length = 540
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 22/244 (9%)
Query: 3 ESMLNKCPVSSYD--QVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKV 60
E ML + V +D + + +++LG +VF FD P+ASAS+AQVH AR + G++V
Sbjct: 92 ELMLLQDRVPPFDPKKAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAARLKTGEEV 151
Query: 61 AVKVQHTHMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLL 115
VKV + A D A + L+ S D R L V + +++ ELD L
Sbjct: 152 VVKVVRPGLKPVIAQDLAWLFLIAKAAE--RASADARRLHPVEIVGDYEKTIYDELDLLR 209
Query: 116 EAKNSEKVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGID 175
EA N+ ++ NF + +Y P+VYW+L K+L+ME + G V D+ ++ D
Sbjct: 210 EAANASQLRRNF-----EDSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMATLADQRTD 264
Query: 176 PHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYK 235
++ + F +F+ F H D H N+ V S + PQ I ID G+
Sbjct: 265 MKLLAERGVEVFFTQVFRDSFFHADMHPGNIFV--------STVKPWSPQYIAIDCGIVG 316
Query: 236 ELDA 239
L A
Sbjct: 317 SLTA 320
>sp|B0KM38|UBIB_PSEPG Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain GB-1) GN=ubiB PE=3 SV=1
Length = 540
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 20/238 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + + +++LG +VF FD P+ASAS+AQVH AR + G++V VKV
Sbjct: 98 DRVPPFDPQKAVALIEEQLGAKVGEVFSRFDVEPLASASVAQVHAARLKTGEEVVVKVVR 157
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSE 121
+ A D A + L+ S D R L V + +++ ELD L EA N+
Sbjct: 158 PGLKPVIAQDLAWLFLIAKAAE--RASADARRLHPVEIVGDYEKTIYDELDLLREAANAS 215
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
++ NF + +Y P+VYW+L K+L+ME + G V D+ ++ D ++
Sbjct: 216 QLRRNF-----EGSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMVTLADQRTDMKLLAE 270
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDA 239
+ F +F+ F H D H N+ V S + PQ I ID G+ L A
Sbjct: 271 RGVEVFFTQVFRDSFFHADMHPGNIFV--------STVKPWSPQYIAIDCGIVGSLTA 320
>sp|Q4KJL4|UBIB_PSEF5 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiB PE=3
SV=1
Length = 534
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 20/236 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + + + +LGK VF FD P+ASAS+AQVH A+ + G++V VKV
Sbjct: 97 DRVPPFDSQKSVALIEAQLGKKISDVFSRFDIEPLASASVAQVHAAKLKTGEEVVVKVIR 156
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSE 121
+ A D A + +L L S D R L V++ +++ ELD L EA N+
Sbjct: 157 PGLKPIIAQDLAWLFILARAAEKL--SADARLLHPVDVVSDYEKTIYDELDLLREAANAS 214
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
++ NF + SP +Y P+VYW+ K+L+ME + G QV D+ ++ D ++
Sbjct: 215 QLKRNF-EGSP----LLYVPQVYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMKMLAE 269
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 237
+ F +F+ F H D H N+ V S + PQ I ID G+ L
Sbjct: 270 RGVEIFFTQVFRDSFFHADMHPGNIFV--------STVQPWSPQYIAIDCGIVGSL 317
>sp|B2SX38|UBIB_BURPP Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1
Length = 525
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 25 LGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQ----KVAVKVQHTHMTDTAAADHATV 80
LG D +FDDF+ VP+ASAS+AQVH A + GQ VAVKV +M +D A +
Sbjct: 108 LGAPVDVLFDDFERVPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALL 167
Query: 81 ELLVNTLHWLFPS---FDYRWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLSPHIANY 137
+ L+ R +VAE + L ELD + EA N ++ NF L +
Sbjct: 168 RDIAVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGL-----DL 222
Query: 138 IYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMMFKHGFV 197
+ P++YW T +L+ME + G ++ V+++R G+D +++R + F +F+ GF
Sbjct: 223 LLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFF 282
Query: 198 HCDPHAANLLVRPVPS 213
H D H N+ V P+
Sbjct: 283 HADMHPGNIQVSLDPA 298
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 20/236 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P + +++LGK +VF FD P+ASAS+AQVH A+ + G++V VKV
Sbjct: 97 DRVPPFDSQLSVKLIEEQLGKKISEVFSRFDVEPLASASVAQVHAAQLKTGEEVVVKVIR 156
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSE 121
+ A D A + +L + S D R L V++ +++ ELD L EA N+
Sbjct: 157 PGLKPIIAQDLAWLFILARAAEKV--SADARLLHPVDVVSDYEKTIYDELDLLREAANAS 214
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
++ NF + SP +Y P+VYW+ K+L+ME + G QV D+ ++ D ++
Sbjct: 215 QLKRNF-EGSP----LLYVPQVYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMKMLAE 269
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 237
+ F +F+ F H D H N+ V S + PQ I ID G+ L
Sbjct: 270 RGVEIFFTQVFRDSFFHADMHPGNIFV--------STVNPWSPQYIAIDCGIVGSL 317
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P DQ + +++LG Q+F FD P+ASAS+AQVH A+ + G++V VKV
Sbjct: 97 DQVPPFPEDQAIALIERQLGAPVSQLFARFDSQPLASASVAQVHAAQLKSGEEVVVKVVR 156
Query: 67 THMTDTAAADHATVELLVNTLHWLFPSFDYRWL-----VAEMRESLPKELDFLLEAKNSE 121
+ D A + LL S D R L V++ +++ ELD L EA N+
Sbjct: 157 PGLKPVIRQDLAWLFLLARIAE--RASADARRLRPVEVVSDYEKTIFDELDLLREAANAS 214
Query: 122 KVLENFWKLSPHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSR 181
++ NF + SP +Y P+VYW+L ++L+ME + G V D+ ++ D ++
Sbjct: 215 QLRRNF-EGSP----LLYVPQVYWDLCRHQVLVMERIYGVPVTDLATLADQRTDMKLLAE 269
Query: 182 LVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKEL 237
+ F +F+ F H D H N+ V S PQ I ID G+ L
Sbjct: 270 RGVEIFFTQVFRDSFFHADMHPGNIFV--------STRTPWSPQYIAIDCGIIGSL 317
>sp|Q5H616|UBIB_XANOR Probable ubiquinone biosynthesis protein UbiB OS=Xanthomonas oryzae
pv. oryzae (strain KACC10331 / KXO85) GN=ubiB PE=3 SV=1
Length = 557
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVAR-----NRDGQKVAVKVQHTHMTDTAA 74
+ ++ LG F FD VP+ASAS+AQVH A N ++V VKV +
Sbjct: 106 IVERALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQID 165
Query: 75 ADHATVELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLS 131
AD A + L + P D R +VAE+ +L ELD E N+ VL FW+ S
Sbjct: 166 ADIALLHSLATLVERTHPRADKIRPREVVAEIEGTLSAELDLQREGANA-SVLRRFWEGS 224
Query: 132 PHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMM 191
+ +Y P+V W+ + + L +E V G +D+ + GID ++ + F +
Sbjct: 225 ----DDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQV 280
Query: 192 FKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKA 251
F+ F H D HA N+ V P + + P+ I +D G+ +L ++ A + A
Sbjct: 281 FRDNFFHADAHAGNIWVDSDPERRLN------PRFIALDFGIMGQLSQEDQYYLAENFMA 334
Query: 252 LIFADANAIKEYSVKLG 268
+ D + E V+ G
Sbjct: 335 IFHKDYRRMAELHVEAG 351
>sp|B2ST34|UBIB_XANOP Probable ubiquinone biosynthesis protein UbiB OS=Xanthomonas oryzae
pv. oryzae (strain PXO99A) GN=ubiB PE=3 SV=1
Length = 557
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVAR-----NRDGQKVAVKVQHTHMTDTAA 74
+ ++ LG F FD VP+ASAS+AQVH A N ++V VKV +
Sbjct: 106 IVERALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQID 165
Query: 75 ADHATVELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLS 131
AD A + L + P D R +VAE+ +L ELD E N+ VL FW+ S
Sbjct: 166 ADIALLHSLATLVERTHPRADKIRPREVVAEIEGTLSAELDLQREGANA-SVLRRFWEGS 224
Query: 132 PHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMM 191
+ +Y P+V W+ + + L +E V G +D+ + GID ++ + F +
Sbjct: 225 ----DDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQV 280
Query: 192 FKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKA 251
F+ F H D HA N+ V P + + P+ I +D G+ +L ++ A + A
Sbjct: 281 FRDNFFHADAHAGNIWVDSDPERRLN------PRFIALDFGIMGQLSQEDQYYLAENFMA 334
Query: 252 LIFADANAIKEYSVKLG 268
+ D + E V+ G
Sbjct: 335 IFHKDYRRMAELHVEAG 351
>sp|Q2P8Q0|UBIB_XANOM Probable ubiquinone biosynthesis protein UbiB OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=ubiB PE=3 SV=1
Length = 557
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 20 VFKKELGKTPDQVFDDFDPVPIASASLAQVHVAR-----NRDGQKVAVKVQHTHMTDTAA 74
+ ++ LG F FD VP+ASAS+AQVH A N ++V VKV +
Sbjct: 106 IVERALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQID 165
Query: 75 ADHATVELLVNTLHWLFPSFDY---RWLVAEMRESLPKELDFLLEAKNSEKVLENFWKLS 131
AD A + L + P D R +VAE+ +L ELD E N+ VL FW+ S
Sbjct: 166 ADIALLHSLATLVERTHPRADKIRPREVVAEIEGTLSAELDLQREGANA-SVLRRFWEGS 224
Query: 132 PHIANYIYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLGIDPHEVSRLVSQAFAEMM 191
+ +Y P+V W+ + + L +E V G +D+ + GID ++ + F +
Sbjct: 225 ----DDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQV 280
Query: 192 FKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGLYKELDATTKFNYAALWKA 251
F+ F H D HA N+ V P + + P+ I +D G+ +L ++ A + A
Sbjct: 281 FRDNFFHADAHAGNIWVDSDPERRLN------PRFIALDFGIMGQLSQEDQYYLAENFMA 334
Query: 252 LIFADANAIKEYSVKLG 268
+ D + E V+ G
Sbjct: 335 IFHKDYRRMAELHVEAG 351
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 36/278 (12%)
Query: 7 NKCPVSSYDQVCDVFKKELGKTPDQVFDDFDPVPIASASLAQVHVARNRDGQKVAVKVQH 66
++ P Q V ++EL D++F F+ P+ASASL QVH A G+ V VKVQ
Sbjct: 99 DRVPPFDSRQAIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQR 158
Query: 67 THMTDTAAADHATVELLVNTLH----WLFPSF-------DYRWLVAEMRESLPKELDFLL 115
+ D ELL TL WL P F + + E L E+D++
Sbjct: 159 PGLDSLLNLDF---ELLHQTLRLAKRWL-PGFRRLAQKYEIEAIYQEFFSLLFLEIDYIH 214
Query: 116 EAKNSEKVLENFWKLSPHIANY--IYAPKVYWNLSTSKLLIMEFVDGAQVNDVKSIRKLG 173
E KN+E+ +NF A+Y + P++YW +T +L +E++ G +V+D +++ G
Sbjct: 215 EGKNAERFRQNF-------ADYPRVRVPEIYWQYTTRMVLTLEYLPGIKVDDRQALETAG 267
Query: 174 IDPHEVSRLVSQAFAEMMFKHGFVHCDPHAANLLVRPVPSEKKSILGKRKPQLILIDHGL 233
I+ V + A+ + + GF DPH N+ V + LI D G
Sbjct: 268 INLDLVIQTGICAYLKQLLVDGFFQSDPHPGNMAV------------DSQGDLIFYDFGT 315
Query: 234 YKELDATTKFNYAALWKALIFADANAIKEYSVKLGAGE 271
E+ K + A++ D N + E + +G E
Sbjct: 316 MAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLVE 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,883,069
Number of Sequences: 539616
Number of extensions: 5726959
Number of successful extensions: 14574
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14061
Number of HSP's gapped (non-prelim): 212
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)